BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022814
(291 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224104290|ref|XP_002313385.1| predicted protein [Populus trichocarpa]
gi|222849793|gb|EEE87340.1| predicted protein [Populus trichocarpa]
Length = 243
Score = 313 bits (801), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 173/245 (70%), Positives = 193/245 (78%), Gaps = 15/245 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKRIQ+INSKEA LGIS++ASWHAKYKDSAYV+VGGIPFDLTEGDLLAVFAQ G
Sbjct: 1 MNPLTLVKRIQNINSKEAALGISEEASWHAKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+VD NLVRDKGTGK +GFAF+AYEDQR +NLNGAQ+LGR IRVDHV KYKKKEE
Sbjct: 61 EVVDANLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNLNGAQVLGRIIRVDHVTKYKKKEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG 174
EDEET Q+ RE RGVC AFQRGEC RG GC+FSH+EQRAANTG G QD+SSRWGHE F+G
Sbjct: 121 EDEETAQQKREARGVCHAFQRGECNRGAGCRFSHDEQRAANTGWGAQDKSSRWGHEMFDG 180
Query: 175 FSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHRE---KPREDHGRREDKRSR 231
S S + E +P Q+DRREEKRS HD E KPRED+ RREDK+ R
Sbjct: 181 ------PKKSEERSSYNMPSESHPKQNDRREEKRSRWHDDNEIVQKPREDYNRREDKKLR 234
Query: 232 RHSDN 236
R D+
Sbjct: 235 RLEDD 239
>gi|297819328|ref|XP_002877547.1| hypothetical protein ARALYDRAFT_905943 [Arabidopsis lyrata subsp.
lyrata]
gi|297323385|gb|EFH53806.1| hypothetical protein ARALYDRAFT_905943 [Arabidopsis lyrata subsp.
lyrata]
Length = 316
Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 160/264 (60%), Positives = 190/264 (71%), Gaps = 28/264 (10%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVK +Q IN++E+DLGIS++ASWHAKYK+SAYVYVG IPFDLTEGDLLAVF+Q G
Sbjct: 1 MNPLTQVKNLQKINARESDLGISEEASWHAKYKNSAYVYVGCIPFDLTEGDLLAVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIVDVNL+RDKGTGK +GFAF+AYEDQR +NLNGA +LGRTI+VDH +YKK EE
Sbjct: 61 EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTVLAVDNLNGALVLGRTIKVDHCREYKKHEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGG-PQDRSSRWGHEKFE 173
EDEETR++ RE RGVCRAFQRGECTRGD CKFSH+E+RAANTG G +DRSSRW H+KF
Sbjct: 121 EDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEEDRSSRWDHDKFN 180
Query: 174 G-------------FSWGKNDSSSRATGSGRVALEGNPNQSDRRE-EKRSIR----HDHR 215
G F + S R G G A G P + +R E E R +D R
Sbjct: 181 GAKKGGTSFGHRGDFKSDAEEKSYRGKGDGD-AWYGRPKERERVEREDMGPRSRDAYDMR 239
Query: 216 EKPREDHGRREDKRSRRHSDNNEF 239
E+ R G +D RSR H+ N++
Sbjct: 240 EQKRS--GPYDDSRSRSHNAGNDY 261
>gi|15232729|ref|NP_190296.1| RNA-binding motif protein, X-linked 2 [Arabidopsis thaliana]
gi|75337070|sp|Q9SD61.1|C3H42_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 42;
Short=AtC3H42
gi|6522593|emb|CAB61958.1| putative RNA binding protein [Arabidopsis thaliana]
gi|27311733|gb|AAO00832.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|34098859|gb|AAQ56812.1| At3g47120 [Arabidopsis thaliana]
gi|332644724|gb|AEE78245.1| RNA-binding motif protein, X-linked 2 [Arabidopsis thaliana]
Length = 352
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/178 (76%), Positives = 156/178 (87%), Gaps = 7/178 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVK +Q IN++E+DLGISD+ASWHAKYK+SAYVYVGGIPFDLTEGDLLAVF+Q G
Sbjct: 1 MNPLTQVKNLQKINARESDLGISDEASWHAKYKNSAYVYVGGIPFDLTEGDLLAVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIVDVNL+RDKGTGK +GFAF+AYEDQR +NLNGA +LGRTI+VDH YKK EE
Sbjct: 61 EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALVLGRTIKVDHCGAYKKHEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGG-PQDRSSRWGHEK 171
EDEETR++ RE RGVCRAFQRGECTRGD CKFSH+E+RAANTG G +DRSS+W H+K
Sbjct: 121 EDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEEDRSSKWDHDK 178
>gi|297745915|emb|CBI15971.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 177/292 (60%), Positives = 206/292 (70%), Gaps = 22/292 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKRIQ INS+EA LGIS+ ASWHAKYK+SAYV+VGGIPFDLTEGDLLAVF+Q G
Sbjct: 1 MNPLTLVKRIQKINSQEAALGISESASWHAKYKESAYVFVGGIPFDLTEGDLLAVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIVDVNLVRDKGTGK +GFAFVAYEDQR +NLNGAQILGR IRVDHV+ YKKKEE
Sbjct: 61 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSNYKKKEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG 174
EDEET ++ RE RGVCRAFQRGEC RG GCKFSH+EQRA+NTG G +D+SSRWGH+KF+G
Sbjct: 121 EDEETERQKREARGVCRAFQRGECNRGAGCKFSHDEQRASNTGWGSEDKSSRWGHDKFQG 180
Query: 175 FSWGKNDSSSRATGSGRVALEGNPNQSDR--REEKRSIRHDHREKPREDHGRREDKRSR- 231
+ K+D + + RV E + R ++ RS R E RE H RR + R
Sbjct: 181 ST--KSDGRPNSIPTNRVH-EPTVGEGHRFGNKDARSSRTKGSEGGRESHHRRSELDIRD 237
Query: 232 -------RHSDNNEFEARSREDHYRR-DEKRPKRHESESYLREDQDRRGGDK 275
R + E E +ED RR E+R R +S ED DRRG D+
Sbjct: 238 QDGRGLERQMEQKEKELNYKEDQDRRTTERRSGRPDSNPG--EDHDRRGEDQ 287
>gi|225434618|ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246760 [Vitis vinifera]
Length = 429
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 184/337 (54%), Positives = 212/337 (62%), Gaps = 72/337 (21%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKRIQ INS+EA LGIS+ ASWHAKYK+SAYV+VGGIPFDLTEGDLLAVF+Q G
Sbjct: 1 MNPLTLVKRIQKINSQEAALGISESASWHAKYKESAYVFVGGIPFDLTEGDLLAVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIVDVNLVRDKGTGK +GFAFVAYEDQR +NLNGAQILGR IRVDHV+ YKKKEE
Sbjct: 61 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSNYKKKEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKF-- 172
EDEET ++ RE RGVCRAFQRGEC RG GCKFSH+EQRA+NTG G +D+SSRWGH+KF
Sbjct: 121 EDEETERQKREARGVCRAFQRGECNRGAGCKFSHDEQRASNTGWGSEDKSSRWGHDKFQG 180
Query: 173 ----------------------EGFSWGKNDS-SSRATGS--GRVA-------------- 193
EG +G D+ SSR GS GR +
Sbjct: 181 STKSDGRPNSIPTNRVHEPTVGEGHRFGNKDARSSRTKGSEGGRESHHRRSELDIRDQDG 240
Query: 194 -------------LEGNPNQSDRREEKRSIRHDHREKPREDHGRR--------EDKRSRR 232
L +Q R E+RS R D P EDH RR ++RSRR
Sbjct: 241 RGLERQMEQKEKELNYKEDQDRRTTERRSGRPD--SNPGEDHDRRGEDQDIRATERRSRR 298
Query: 233 HSDN--NEFEARSREDHYRRDEKRPKRHESESYLRED 267
H N + + R + R E+R +RH+ ES RED
Sbjct: 299 HDSNPSEDHDRRGEDQDIRATERRSRRHDFESNPRED 335
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 68/106 (64%), Gaps = 12/106 (11%)
Query: 194 LEGNPNQSDRREEKR--------SIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSRE 245
E NP + DR+EE R S R + PREDH RRE+KRSRRH E E++ +E
Sbjct: 328 FESNPREDDRKEEDRDRRATERRSRRSEFESNPREDHDRREEKRSRRH----ELESKPKE 383
Query: 246 DHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 291
DH RR+EK+ +RHESESYLRED GDK S D++SHRHRER
Sbjct: 384 DHDRREEKQSRRHESESYLREDPRDERGDKRSGHSRDTASHRHRER 429
>gi|449460375|ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Cucumis sativus]
Length = 395
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 211/305 (69%), Gaps = 44/305 (14%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKRIQ INS+EA LGIS++ASWHAKYKDSAYV+VGGIP+DLTEGDLLAVFAQ G
Sbjct: 1 MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIVDVNL+RDKGTGK +G+AFVAYEDQR +NLNGAQILGR +RVDHV+KYKKKEE
Sbjct: 61 EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTG-GGPQDRSSRWGHEKFE 173
EDEE Q+ RE RGVCRAFQRGECTRG GCKFSH+EQRAA+TG G +D SS+WGH+KF+
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180
Query: 174 GFSWGKNDSSSRATG--------------SGRVALEGNPNQSDRREEKRSIRHDHREKPR 219
S +D A G SG + E P D +E K R
Sbjct: 181 --SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESEL-------KSR 231
Query: 220 EDHGRREDKRSRRHSDNNEFEARSREDHY--------------RRDEKRPKRHESESYLR 265
EDHG +++KRSRR+ + + +S +D Y R+DEKR ++H+++ ++
Sbjct: 232 EDHGGKDEKRSRRYDLDGNSDPKSGDDQYKGEEKRSSRNHDDNRKDEKRSRKHDNDDEMK 291
Query: 266 EDQDR 270
+ DR
Sbjct: 292 LEDDR 296
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 203 RREEKRSIRHDHREKP----REDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRH 258
R+EE R R+ E P R+ R ED+ S+RH D E+ + RED RR+ RH
Sbjct: 298 RKEENRYRRNQDNELPQHSRRDYKTREEDRSSKRHGDK-EYPPKLREDDKRRERDVSVRH 356
Query: 259 ESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 291
SESY RE+ D + +SS G DSSSH HRER
Sbjct: 357 RSESYRRENPDEKRDYRSSHGGRDSSSHSHRER 389
>gi|356551855|ref|XP_003544288.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
[Glycine max]
Length = 354
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/331 (54%), Positives = 216/331 (65%), Gaps = 62/331 (18%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKR Q+IN++EA LGI + ASWH KYKDSAYV+VGGIPFDLTEGDLLAVFAQ G
Sbjct: 1 MNPLTLVKRTQNINAREAALGIGEQASWHTKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+VDVNLVRDKGTGK +GFAF+AYEDQR +NLNGAQ+LGR IRVDHV KYKKKEE
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQVLGRIIRVDHVDKYKKKEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG 174
EDEET ++ RE RGVCRAFQRGECTRG CKFSH+EQRAANTG G ++ +WGH+KF+G
Sbjct: 121 EDEETERQKREARGVCRAFQRGECTRGASCKFSHDEQRAANTGWGREEDKPKWGHDKFDG 180
Query: 175 FS----WGKN-----------DSSSRATGSGRVALEGNPNQSDR---------------- 203
G N DS SRA + L+ P +SDR
Sbjct: 181 PKKERRSGNNQSNHIAETRDRDSFSRARNND-AELDNQPKRSDRKEMTKREYRYKREEKG 239
Query: 204 ------------------REEKRSIRHDHRE-KPRE-DHGRREDKRSRRHSDNNEFEARS 243
REEKRSI+ D E +P+ D REDKRSRR DN++ ++S
Sbjct: 240 SRRDDYDGMKLEPKDHHLREEKRSIKPDDVEVEPKSRDSDIREDKRSRRR-DNDDIVSKS 298
Query: 244 REDHYRRDEKRPKRH---ESESYLREDQDRR 271
RE H ++++ ++H ES RED DR+
Sbjct: 299 REPHGYSEDRKSRKHSEGESAPKPREDYDRK 329
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
Query: 192 VALEGNPNQSDRREEKRSIRHDHRE---KPREDHGRREDKRSRRHSDNNEFEARSREDHY 248
V +E SD RE+KRS R D+ + K RE HG ED++SR+HS+ E + RED+
Sbjct: 269 VEVEPKSRDSDIREDKRSRRRDNDDIVSKSREPHGYSEDRKSRKHSE-GESAPKPREDYD 327
Query: 249 RRDEKRPKR---HESESYLREDQDRR 271
R+ +KR R +++ES R DRR
Sbjct: 328 RKQDKRSYRNYSNQTESKERYAFDRR 353
>gi|147840589|emb|CAN72715.1| hypothetical protein VITISV_032469 [Vitis vinifera]
Length = 737
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/311 (56%), Positives = 206/311 (66%), Gaps = 41/311 (13%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKRIQ INS+EA LGIS+ ASWHAKYK+SAYV+VGGIPFDLTEGDLLAVF+Q G
Sbjct: 1 MNPLTLVKRIQKINSQEAALGISESASWHAKYKESAYVFVGGIPFDLTEGDLLAVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIVDVNLVRDKGTGK +GFAFVAYEDQR +NLNGAQILGR IRVDHV+ YKKKEE
Sbjct: 61 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSNYKKKEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQ-------------------RAAN 155
EDEET ++ RE RGVCRAFQRGEC RG GCKFSH+EQ RA+N
Sbjct: 121 EDEETERQKREARGVCRAFQRGECNRGAGCKFSHDEQDLTFSWLSKSWRLVLQGLERASN 180
Query: 156 TGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDR--REEKRSIRHD 213
TG G +D+SSRWGH+KF+G + K+D + + RV E + R ++ RS R
Sbjct: 181 TGWGSEDKSSRWGHDKFQGST--KSDGRPNSIPTNRVH-EPTVGEGHRFGNKDARSSRTK 237
Query: 214 HREKPREDHGRREDKRSR--------RHSDNNEFEARSREDHYRR-DEKRPKRHESESYL 264
E RE H RR + R R + E E +ED RR E+R R +S
Sbjct: 238 GSEGGRESHHRRSELDIRDQDGRGLERQMEQKEKELNYKEDQDRRTTERRSGRPDSNP-- 295
Query: 265 REDQDRRGGDK 275
ED DRRG D+
Sbjct: 296 GEDHDRRGEDQ 306
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 199 NQSDRREEKRSIRHDHREKPREDHGRREDK---RSRRHSDNNEFEARSREDHYRRDEKRP 255
+Q R E+RS RHD PRED + ED+ + R S +EFE+ REDH RR+EKR
Sbjct: 332 DQDIRATERRSRRHDFESNPREDDRKEEDRDRRATERRSRRSEFESNPREDHDRREEKRS 391
Query: 256 KRHESES 262
+RHE ES
Sbjct: 392 RRHELES 398
>gi|357490653|ref|XP_003615614.1| RNA binding domain protein [Medicago truncatula]
gi|355516949|gb|AES98572.1| RNA binding domain protein [Medicago truncatula]
Length = 393
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 168/277 (60%), Positives = 200/277 (72%), Gaps = 26/277 (9%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKRIQ INS+EA L IS+DASWH KYKDSAYV+VGGIPFD TEGD++AVFAQ G
Sbjct: 1 MNPLTLVKRIQQINSREAALNISEDASWHTKYKDSAYVFVGGIPFDFTEGDVIAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+VD+NLVRDKGTGK +GFAF+AYEDQR +NLNGAQ+ GR IRVDHV KYKK EE
Sbjct: 61 EVVDINLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNLNGAQVSGRIIRVDHVDKYKKMEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG 174
EDEE ++ RE RGVCRAFQRGECTRG GCKFSH+EQRAANTG G + ++ ++K++G
Sbjct: 121 EDEEEAKQKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWG-DNGIAKGDNDKYDG 179
Query: 175 FS----WGKN-----------DSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREK-- 217
+G N DS SRA G+G + L+ +SDRREEK R D
Sbjct: 180 PKKERRYGNNQPDRIPETRDRDSRSRAHGNG-MELDNPSKRSDRREEKMLRRQDGDGNFV 238
Query: 218 PREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKR 254
RE+ RRE+KR R + D +EFE RED +RR+EKR
Sbjct: 239 GRENTSRREEKRPRDYKD-DEFEQWPREDRHRREEKR 274
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 192 VALEGNPNQSDRREEKRSIRHDHRE---KPREDHGRREDKRSRRHSDNNEFEARSREDHY 248
V E SD RE+KR R D + K RE G RE++RSR+H+D +E RSREDH
Sbjct: 302 VKFEPKSRDSDLREDKRPSRRDVDDFGSKSRETQGSREERRSRKHTD-DESMPRSREDHD 360
Query: 249 RRDEKRPKRHE---SESYLREDQDRR 271
R+ + R + SES R D DRR
Sbjct: 361 RKQDNRSYHKDADRSESKGRNDSDRR 386
>gi|356498939|ref|XP_003518303.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
[Glycine max]
Length = 235
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/229 (66%), Positives = 172/229 (75%), Gaps = 22/229 (9%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKR Q+IN++EA LGI + ASWH KYKDSAYV+VGGIPFDLTEGDLLAVFAQ G
Sbjct: 1 MNPLTLVKRTQNINAREAALGIGEQASWHTKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+VDVNLVRDKGTGK +GFAF+AYEDQR +NLNGAQ+LGR IRVDHV KYKKKEE
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQVLGRIIRVDHVDKYKKKEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG 174
EDEET ++ RE RGVCRAFQRGECTRG CKFSH+EQRAANTG G ++ +WGH+KFEG
Sbjct: 121 EDEETERQKREARGVCRAFQRGECTRGASCKFSHDEQRAANTGWGREEDKPKWGHDKFEG 180
Query: 175 FS----WGKN-----------DSSSRATGSGRVALEGNPNQSDRREEKR 208
G N DS +RA L+ P +SDRRE KR
Sbjct: 181 PKKERRSGNNQSNHIPETRDRDSRTRARNFD-AELDNQPKKSDRRETKR 228
>gi|297793411|ref|XP_002864590.1| hypothetical protein ARALYDRAFT_358097 [Arabidopsis lyrata subsp.
lyrata]
gi|297310425|gb|EFH40849.1| hypothetical protein ARALYDRAFT_358097 [Arabidopsis lyrata subsp.
lyrata]
Length = 173
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/171 (73%), Positives = 143/171 (83%), Gaps = 6/171 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK+ Q IN+KE DLGISD+ASWHAKYKDSAYVYVG + +DLTEGDLLAVFAQ G
Sbjct: 1 MNPLTMVKQTQRINAKELDLGISDEASWHAKYKDSAYVYVGELLYDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+VDVNL RDKGTGK +GFAFVAYEDQR +NLNGA++LGR I+V+H KY K+EE
Sbjct: 61 EVVDVNLARDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAKVLGRIIKVEHCGKYSKREE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSS 165
+DEET+ + RE RGVCRAFQR ECTRGDGCKFSH+E R ANTG G +DR S
Sbjct: 121 DDEETKHKKREARGVCRAFQRKECTRGDGCKFSHDENRGANTGWGHEDRRS 171
>gi|357123042|ref|XP_003563222.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Brachypodium distachyon]
Length = 385
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 150/178 (84%), Gaps = 7/178 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVKR Q IN KEA LG+S+DASWHAK+KDSAYV+VGG+P+DLTEGDLLAVFAQ G
Sbjct: 1 MNPLTQVKRTQVINQKEAALGLSEDASWHAKFKDSAYVFVGGVPYDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+VDVNLVRDK TGK +GFAFVAYEDQR +NLNGA++LGR IRVDHV KYKKKEE
Sbjct: 61 EVVDVNLVRDKATGKSKGFAFVAYEDQRSTVLAVDNLNGAKVLGRIIRVDHVDKYKKKEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTG-GGPQDRSSRWGHEK 171
EDE+ Q+ REERGVC AFQ+GEC RGD C++SH+EQR ANTG G +D + +W H++
Sbjct: 121 EDEDELQKKREERGVCYAFQKGECNRGDACRYSHDEQRNANTGWGSKEDINPKWEHDR 178
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 32/180 (17%)
Query: 125 EERGVCRAFQRGECTRGDGCKFSHNEQRAANTG-GGPQDRSSR----------WGHEKFE 173
+ RG+C AFQ+GEC RG C+FSH+E+R A+ G +DR++R H+KF
Sbjct: 217 QARGICYAFQKGECNRGASCRFSHDEERNADAGRSSKEDRNARRDQDRHLDPPKSHKKFP 276
Query: 174 GFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRS-RR 232
S++ + R E P + + + + D R HG R K S RR
Sbjct: 277 S-------SAADQSFPDRTEEESRPANREGQSSRSEVYRDR--DSRVKHGDRSTKDSDRR 327
Query: 233 HSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTG----RGDSSSHRH 288
H + E RSR + +R D+ R+ E R + R D+ S G RGD + R+
Sbjct: 328 HEKSPE---RSRGERHRSDD----RYMQEREERSESKRSRNDRDSGGRYERRGDEEAERY 380
>gi|326520181|dbj|BAK04015.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 404
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 149/180 (82%), Gaps = 6/180 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVKR Q IN KEA LG+S+DASWHAK++ SAYV+VGG+PFDLTEGDLLAVFAQ G
Sbjct: 1 MNPLTQVKRTQVINQKEAALGLSEDASWHAKFRGSAYVFVGGVPFDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+VDVNLVRDK TGK +GFAFVAYEDQR +NLNGA++LGR IRVDHV KYKKKEE
Sbjct: 61 EVVDVNLVRDKATGKSKGFAFVAYEDQRSTVLAVDNLNGAKVLGRIIRVDHVEKYKKKEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG 174
EDEE Q+ REERGVC AFQ+GEC RGD CK+SH+EQR ANTG G ++ +W H++ G
Sbjct: 121 EDEEELQKKREERGVCYAFQKGECNRGDACKYSHDEQRNANTGWGSKEDDPKWEHDRHRG 180
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 5/40 (12%)
Query: 127 RGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSR 166
RGVC AFQ+GEC+RG C+FSH+EQR ANT DR SR
Sbjct: 218 RGVCYAFQKGECSRGASCRFSHDEQRNANT-----DRGSR 252
>gi|226496357|ref|NP_001149007.1| RNA-binding motif protein, X-linked 2 [Zea mays]
gi|195623912|gb|ACG33786.1| RNA-binding motif protein, X-linked 2 [Zea mays]
Length = 298
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/178 (72%), Positives = 149/178 (83%), Gaps = 7/178 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVKR Q IN KEA LGI +DASWHAK+KDSAYVYVGG+PFDLTEGDLLA+FAQ G
Sbjct: 1 MNPLTQVKRTQIINQKEAILGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+VDVNLVRDKGTGK +GFAF+AYEDQR +NLNGA++LGR I+VDHV+KYKKKEE
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTG-GGPQDRSSRWGHEK 171
EDEE Q+ RE RGVC AFQ+GEC RG C++SH+EQR ANTG G +D +RW H+K
Sbjct: 121 EDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEDSGARWEHDK 178
>gi|223946841|gb|ACN27504.1| unknown [Zea mays]
gi|407232618|gb|AFT82651.1| C3H30 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414873727|tpg|DAA52284.1| TPA: RNA-binding motif protein, X-linked 2 [Zea mays]
Length = 298
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 129/178 (72%), Positives = 149/178 (83%), Gaps = 7/178 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVKR Q IN KEA LGI +DASWHAK+KDSAYVYVGG+PFDLTEGDLLA+FAQ G
Sbjct: 1 MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+VDVNLVRDKGTGK +GFAF+AYEDQR +NLNGA++LGR I+VDHV+KYKKKEE
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIIKVDHVSKYKKKEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTG-GGPQDRSSRWGHEK 171
EDEE Q+ RE RGVC AFQ+GEC RG C++SH+EQR ANTG G +D +RW H+K
Sbjct: 121 EDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEDSGARWEHDK 178
>gi|115456325|ref|NP_001051763.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|122246709|sp|Q10B98.1|C3H25_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 25;
Short=OsC3H25
gi|15042832|gb|AAK82455.1|AC091247_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|18855068|gb|AAL79760.1|AC096687_24 putative small nuclear ribonucleoprotein [Oryza sativa Japonica
Group]
gi|108711850|gb|ABF99645.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550234|dbj|BAF13677.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|125588469|gb|EAZ29133.1| hypothetical protein OsJ_13196 [Oryza sativa Japonica Group]
Length = 312
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/178 (71%), Positives = 149/178 (83%), Gaps = 7/178 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVKR Q IN KEA LGI +D SWHAK+KDSAYV+VGGIP+DLTEGDLLAVFAQ G
Sbjct: 1 MNPLTQVKRTQVINQKEALLGIGEDGSWHAKFKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+VDVNLVRDKGTGK +GFAF+AYEDQR +NLNGA++LGR +RVDHV+KYKKKEE
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIVRVDHVSKYKKKEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRS-SRWGHEK 171
EDEE Q+ RE RGVC AFQ+GEC RG C++SH+EQR ANTG G ++ S +RW H++
Sbjct: 121 EDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEESKARWEHDR 178
>gi|242037549|ref|XP_002466169.1| hypothetical protein SORBIDRAFT_01g002770 [Sorghum bicolor]
gi|241920023|gb|EER93167.1| hypothetical protein SORBIDRAFT_01g002770 [Sorghum bicolor]
Length = 298
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/281 (53%), Positives = 189/281 (67%), Gaps = 17/281 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVKR Q IN KEA LGI +DASWHAK+KDSAYVYVGG+PFDLTEGDLLA+FAQ G
Sbjct: 1 MNPLTQVKRTQVINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+VDVNLVRDKGTGK +GFAF+AYEDQR +NLNGA++LGR IRVDHV+KYKKKEE
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIIRVDHVSKYKKKEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTG-GGPQDRSSRWGHEKFE 173
EDEE +Q+ RE RGVC AFQ+GEC RG C++SH+EQR ANTG G +D +RW H+K
Sbjct: 121 EDEEEQQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEDSGARWEHDKHS 180
Query: 174 GFSWGKNDSSSRATGSGRVALEGNPNQSDR--REEKRSIRHDHREKPREDHGRREDKRSR 231
SR E N S + +E+R++ ++R+ R+ R ++
Sbjct: 181 DVP------KSRGMCYAFQKGECNRGASCKFSHDEQRNV--NNRQSSRDGEPSRSERYGD 232
Query: 232 RHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRG 272
R S + + R+ + R + P+R E +D+ RG
Sbjct: 233 RESRSRHDDRRAEDRDRYRRDNSPERLRGERQRNDDRSDRG 273
>gi|168006572|ref|XP_001755983.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692913|gb|EDQ79268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 234
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/183 (66%), Positives = 144/183 (78%), Gaps = 9/183 (4%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVK Q I ++E +GISD+ SWHAKYKDSAY+YVGG+ F LTEGD+LAVFAQ G
Sbjct: 1 MNPLTQVKNTQKITAREQAIGISDEGSWHAKYKDSAYIYVGGLSFGLTEGDVLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+VDVNLVRDK TGK +GFAF+AYEDQR +NLNGA++ R I+VDHV+ YK+K E
Sbjct: 61 EVVDVNLVRDKATGKSKGFAFLAYEDQRSTVLAVDNLNGARVDSRIIKVDHVSDYKRKLE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTG---GGPQDRSSRWGHEK 171
EDEE +QR REERGVC AFQRGEC RGD CKFSH+EQR +NTG GG + W H++
Sbjct: 121 EDEEEKQRKREERGVCYAFQRGECKRGDDCKFSHDEQRNSNTGWGEGGSRKDGGSWKHDQ 180
Query: 172 FEG 174
F+G
Sbjct: 181 FDG 183
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 116 DEETRQRMREERGVCRAFQRGECTRGDGCKFSHN 149
D+ +R + RGVC AFQRGEC RGDGCKF+H+
Sbjct: 201 DDGMNEREDKPRGVCYAFQRGECNRGDGCKFAHD 234
>gi|356526389|ref|XP_003531800.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 617
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/157 (75%), Positives = 131/157 (83%), Gaps = 6/157 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP T VKR Q+IN++EA L I D ASWH KYKDSAY++VGGIPFDLTEGDLL VFAQ G
Sbjct: 1 MNPPTLVKRTQNINAREAALSIGDHASWHTKYKDSAYIFVGGIPFDLTEGDLLPVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NLNGAQILGRTIRVDHVAKYKKKEE 114
E+VDVNLVRDKGTGK + FAF+AYEDQR+ NLNGAQ+LGR I+VDHV KYKKKEE
Sbjct: 61 EVVDVNLVRDKGTGKSKDFAFLAYEDQRSADLAVDNLNGAQVLGRIIKVDHVDKYKKKEE 120
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQ 151
EDEET + RE RGVCRAFQRGECTRG CKFSH+EQ
Sbjct: 121 EDEETERLKREARGVCRAFQRGECTRGASCKFSHDEQ 157
>gi|395835423|ref|XP_003790679.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Otolemur
garnettii]
Length = 331
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 100/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 112 KEEEDEETRQ 121
EE DEETR+
Sbjct: 121 SEEVDEETRK 130
>gi|159474400|ref|XP_001695313.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158275796|gb|EDP01571.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 133
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 97/128 (75%), Gaps = 6/128 (4%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQ+K IQ +E + G D ASWHAKYK SAY++ GG+ +DLTEGDLLAVFAQ G
Sbjct: 1 MNPLTQIKNIQKATKREIETGTQDSASWHAKYKHSAYIFAGGLDYDLTEGDLLAVFAQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+VD+NL+RDK +GK +GFAFVAYEDQR +N NGA++ GRTIRV+HV YKK++
Sbjct: 61 EVVDLNLIRDKDSGKSKGFAFVAYEDQRSTVLATDNFNGAKVAGRTIRVEHVDNYKKRKA 120
Query: 115 EDEETRQR 122
E E+ R
Sbjct: 121 EVRESDAR 128
>gi|410212532|gb|JAA03485.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410251714|gb|JAA13824.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410308778|gb|JAA32989.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410333627|gb|JAA35760.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
Length = 322
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 112 KEEEDEETRQ 121
EE D+ TRQ
Sbjct: 121 SEEMDDVTRQ 130
>gi|426397384|ref|XP_004064898.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Gorilla gorilla
gorilla]
Length = 322
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 112 KEEEDEETRQ 121
EE D+ TRQ
Sbjct: 121 SEEMDDVTRQ 130
>gi|332226384|ref|XP_003262369.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Nomascus
leucogenys]
Length = 322
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 112 KEEEDEETRQ 121
EE D+ TRQ
Sbjct: 121 SEEMDDVTRQ 130
>gi|388453455|ref|NP_001253777.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|380813648|gb|AFE78698.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|383419077|gb|AFH32752.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|384947606|gb|AFI37408.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
Length = 322
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 112 KEEEDEETRQ 121
EE D+ TRQ
Sbjct: 121 SEEMDDVTRQ 130
>gi|402911397|ref|XP_003919621.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Papio anubis]
Length = 322
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 112 KEEEDEETRQ 121
EE D+ TRQ
Sbjct: 121 SEEMDDVTRQ 130
>gi|118600973|ref|NP_057108.2| RNA-binding motif protein, X-linked 2 [Homo sapiens]
gi|62512110|sp|Q9Y388.2|RBMX2_HUMAN RecName: Full=RNA-binding motif protein, X-linked 2
gi|4938275|emb|CAB43745.1| hypothetical protein [Homo sapiens]
gi|62020769|gb|AAH33750.1| RNA binding motif protein, X-linked 2 [Homo sapiens]
gi|119632205|gb|EAX11800.1| RNA binding motif protein, X-linked 2, isoform CRA_b [Homo sapiens]
gi|158259171|dbj|BAF85544.1| unnamed protein product [Homo sapiens]
Length = 322
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 112 KEEEDEETRQ 121
EE D+ TRQ
Sbjct: 121 SEEIDDVTRQ 130
>gi|296236404|ref|XP_002763305.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Callithrix
jacchus]
Length = 342
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 21 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 80
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 81 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 140
Query: 112 KEEEDEETRQ 121
EE D+ TR+
Sbjct: 141 SEEMDDVTRE 150
>gi|344286268|ref|XP_003414881.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Loxodonta
africana]
Length = 401
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 102/138 (73%), Gaps = 9/138 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA+V++GG+P++LTEGD++ VF+Q G
Sbjct: 75 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWVFLGGLPYELTEGDIICVFSQYG 134
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
E+V++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 135 EVVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPKD 194
Query: 112 KEEEDEETRQRMREERGV 129
EE D+ TR+ + GV
Sbjct: 195 SEELDDVTRELQEKGCGV 212
>gi|5531845|gb|AAD44497.1| RNA-binding protein [Homo sapiens]
Length = 276
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 112 KEEEDEETRQ 121
EE D+ TRQ
Sbjct: 121 SEEIDDVTRQ 130
>gi|431908562|gb|ELK12156.1| RNA-binding motif protein, X-linked 2 [Pteropus alecto]
Length = 346
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 21 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 80
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 81 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 140
Query: 112 KEEEDEETRQ 121
EE D+ TR+
Sbjct: 141 SEEMDDVTRE 150
>gi|182888560|ref|NP_001107258.2| RNA-binding motif protein, X-linked 2 [Rattus norvegicus]
gi|374253659|sp|B0BN49.1|RBMX2_RAT RecName: Full=RNA-binding motif protein, X-linked 2
gi|165970686|gb|AAI58685.1| Rbmx2 protein [Rattus norvegicus]
Length = 328
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 102/136 (75%), Gaps = 7/136 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG+++ SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHVA Y+ +E
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVANYRAPQE 120
Query: 115 -EDEETRQRMREERGV 129
ED + R +E+G
Sbjct: 121 SEDVDDVTRELQEKGC 136
>gi|327284806|ref|XP_003227126.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Anolis
carolinensis]
Length = 287
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 100/133 (75%), Gaps = 8/133 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +EA LG+ D SWH++Y DSA+V+VGG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREAQLGVQDKVSWHSEYNDSAWVFVGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--KK 112
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHVA Y+ K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFICYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYRPPKD 120
Query: 113 EEEDEETRQRMRE 125
E+ +E + +RE
Sbjct: 121 SEDIDEVTKTLRE 133
>gi|403279255|ref|XP_003931175.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Saimiri
boliviensis boliviensis]
Length = 342
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 21 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 80
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 81 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 140
Query: 112 KEEEDEETRQ 121
EE D+ +R+
Sbjct: 141 SEEMDDVSRE 150
>gi|432900542|ref|XP_004076708.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Oryzias
latipes]
Length = 255
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 103/134 (76%), Gaps = 8/134 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +EADLG+++ SWH++Y+DSA+++VGG P++LTEGDLL VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREADLGVNEKVSWHSEYRDSAWIFVGGFPYELTEGDLLCVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--KK 112
EIV+VNLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV Y+ K
Sbjct: 61 EIVNVNLVRDKKTGKSKGFCFICYEDQRSTILAVDNFNGIKIKGRTIRVDHVKNYRPPKD 120
Query: 113 EEEDEETRQRMREE 126
E+ ++ +R+RE+
Sbjct: 121 GEDIDDVTKRLRED 134
>gi|375268714|ref|NP_001243518.1| RNA binding motif protein, X-linked 2 [Bos taurus]
gi|296471256|tpg|DAA13371.1| TPA: RNA binding motif protein, X-linked 2-like protein [Bos
taurus]
Length = 358
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 103/138 (74%), Gaps = 11/138 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E +LG+++ SWH +YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 21 MNPLTKVKLINELNEREVELGVAEKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYG 80
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK-- 112
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y+
Sbjct: 81 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRLPED 140
Query: 113 -EEEDEETRQRMREERGV 129
EE DE TR+ +ERG
Sbjct: 141 SEEMDEVTRE--LQERGC 156
>gi|348552954|ref|XP_003462292.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Cavia
porcellus]
Length = 388
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 96/123 (78%), Gaps = 6/123 (4%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG+++ SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 53 MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDVICVFSQYG 112
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y+ +E
Sbjct: 113 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKE 172
Query: 115 EDE 117
DE
Sbjct: 173 SDE 175
>gi|432093575|gb|ELK25559.1| RNA-binding motif protein, X-linked 2 [Myotis davidii]
Length = 337
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 102/136 (75%), Gaps = 7/136 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADTVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK-KKE 113
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y+ KE
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRTPKE 120
Query: 114 EEDEETRQRMREERGV 129
E+ + + +E+G
Sbjct: 121 SEEMDIVTKELQEKGC 136
>gi|343887401|ref|NP_001230600.1| RNA binding motif protein, X-linked 2 [Sus scrofa]
Length = 329
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 103/138 (74%), Gaps = 11/138 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG+++ SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 112 KEEEDEETRQRMREERGV 129
EE D+ T++ +ERG
Sbjct: 121 SEETDDVTKE--LQERGC 136
>gi|397496325|ref|XP_003846130.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Pan paniscus]
Length = 350
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 112 KEEEDEETRQ 121
EE D+ TRQ
Sbjct: 121 SEEMDDVTRQ 130
>gi|281351269|gb|EFB26853.1| hypothetical protein PANDA_007127 [Ailuropoda melanoleuca]
Length = 334
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 10 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 69
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 70 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 129
Query: 112 KEEEDEETRQ 121
EE D+ T++
Sbjct: 130 LEEIDDMTKE 139
>gi|301766430|ref|XP_002918652.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Ailuropoda
melanoleuca]
Length = 325
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 112 KEEEDEETRQ 121
EE D+ T++
Sbjct: 121 LEEIDDMTKE 130
>gi|149745621|ref|XP_001500162.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Equus
caballus]
Length = 327
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 96/123 (78%), Gaps = 6/123 (4%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y+ ++
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 115 EDE 117
+E
Sbjct: 121 SEE 123
>gi|302794524|ref|XP_002979026.1| hypothetical protein SELMODRAFT_6997 [Selaginella moellendorffii]
gi|300153344|gb|EFJ19983.1| hypothetical protein SELMODRAFT_6997 [Selaginella moellendorffii]
Length = 130
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 93/112 (83%), Gaps = 6/112 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVK +Q I ++E+ GI++ ASWHA+YKDSAY++ GG+ ++L EGD+LAVFAQ G
Sbjct: 1 MNPLTQVKNLQKITARESASGIAESASWHAEYKDSAYIFFGGLAYELNEGDILAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NLNGAQILGRTIRVDHV 106
E+VDVNL+RDKGTGK +G+ F+AYEDQR+ NLNGAQ+ GRT+RVDHV
Sbjct: 61 EVVDVNLIRDKGTGKSKGYGFLAYEDQRSTTLAVDNLNGAQVAGRTLRVDHV 112
>gi|166796147|gb|AAI59019.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
gi|166796532|gb|AAI59007.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
Length = 269
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 101/133 (75%), Gaps = 8/133 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N++EA LG+ D SWH YKDSA++++GG+P++L+EGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNAREASLGVKDSVSWHQDYKDSAWLFIGGLPYELSEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--KK 112
E+V++NLVRDK +G+ RGF F+ +EDQR +NLNG ++ GRTIRVDHVA Y+ K
Sbjct: 61 EVVNINLVRDKSSGRSRGFCFLCFEDQRSTVLAVDNLNGIKVKGRTIRVDHVANYRPPKD 120
Query: 113 EEEDEETRQRMRE 125
E+ +E Q +RE
Sbjct: 121 AEDIDEITQSLRE 133
>gi|62858501|ref|NP_001016941.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
gi|89268233|emb|CAJ83312.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
Length = 269
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 101/133 (75%), Gaps = 8/133 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N++EA LG+ D SWH YKDSA++++GG+P++L+EGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNAREASLGVKDSVSWHQDYKDSAWLFIGGLPYELSEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--KK 112
E+V++NLVRDK +G+ RGF F+ +EDQR +NLNG ++ GRTIRVDHVA Y+ K
Sbjct: 61 EVVNINLVRDKSSGRSRGFCFLCFEDQRSTVLAVDNLNGIKVKGRTIRVDHVANYRPPKD 120
Query: 113 EEEDEETRQRMRE 125
E+ +E Q +RE
Sbjct: 121 AEDIDEITQSLRE 133
>gi|27734072|ref|NP_775552.1| RNA-binding motif protein, X-linked 2 [Mus musculus]
gi|61230302|sp|Q8R0F5.1|RBMX2_MOUSE RecName: Full=RNA-binding motif protein, X-linked 2
gi|20071694|gb|AAH26976.1| RNA binding motif protein, X-linked 2 [Mus musculus]
gi|26345092|dbj|BAC36195.1| unnamed protein product [Mus musculus]
gi|74207503|dbj|BAE40004.1| unnamed protein product [Mus musculus]
Length = 326
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 101/136 (74%), Gaps = 7/136 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG+++ SWH++YK SA+++VGG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y+ +E
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQE 120
Query: 115 -EDEETRQRMREERGV 129
ED + R +E+G
Sbjct: 121 SEDVDDVTRELQEKGC 136
>gi|4929627|gb|AAD34074.1|AF151837_1 CGI-79 protein [Homo sapiens]
Length = 351
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 112 KEEEDEETRQ 121
EE D+ TRQ
Sbjct: 121 SEEIDDVTRQ 130
>gi|302806382|ref|XP_002984941.1| hypothetical protein SELMODRAFT_7006 [Selaginella moellendorffii]
gi|300147527|gb|EFJ14191.1| hypothetical protein SELMODRAFT_7006 [Selaginella moellendorffii]
Length = 130
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 93/112 (83%), Gaps = 6/112 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQVK +Q I ++E+ GI++ ASWHA+YKDSAY++ GG+ ++L EGD+LAVFAQ G
Sbjct: 1 MNPLTQVKNLQKITARESASGIAESASWHAEYKDSAYIFFGGLAYELNEGDILAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHV 106
E+VDVNL+RDKGTGK +G+ F+AYEDQR +NLNGAQ+ GRT+RVDHV
Sbjct: 61 EVVDVNLIRDKGTGKSKGYGFLAYEDQRSTTLAVDNLNGAQVAGRTLRVDHV 112
>gi|410929842|ref|XP_003978308.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Takifugu
rubripes]
Length = 341
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/134 (54%), Positives = 101/134 (75%), Gaps = 8/134 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +EADLG+ + SWH++YKDSA+V++GG P++L+EGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINQLNEREADLGVKETVSWHSEYKDSAWVFIGGFPYELSEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--KK 112
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV Y+ K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVKDYRPPKD 120
Query: 113 EEEDEETRQRMREE 126
E+ ++ + +REE
Sbjct: 121 SEDIDDVTKILREE 134
>gi|345807592|ref|XP_549256.3| PREDICTED: RNA-binding motif protein, X-linked 2 [Canis lupus
familiaris]
Length = 336
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 112 KEEEDEETRQ 121
EE D+ T++
Sbjct: 121 SEEMDDVTKE 130
>gi|426258338|ref|XP_004022771.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Ovis aries]
Length = 461
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 102/138 (73%), Gaps = 11/138 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG+++ SWH +YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 99 MNPLTKVKLINELNEREVQLGVAEKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYG 158
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NLNGAQILGRTIRVDHVAKYKKK-- 112
EIV++NLVRDK TGK +GF F+ YEDQR+ N NG +I GRTIRVDHV+ Y+
Sbjct: 159 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRLPED 218
Query: 113 -EEEDEETRQRMREERGV 129
EE DE TR+ +ERG
Sbjct: 219 SEEMDEVTRE--LQERGC 234
>gi|116283305|gb|AAH03676.1| RBMX2 protein [Homo sapiens]
Length = 163
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 112 KEEEDEETRQ 121
EE D+ TRQ
Sbjct: 121 SEEIDDVTRQ 130
>gi|111494063|gb|AAI05583.1| RBMX2 protein [Homo sapiens]
Length = 173
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 112 KEEEDEETRQ 121
EE D+ TRQ
Sbjct: 121 SEEIDDVTRQ 130
>gi|348544233|ref|XP_003459586.1| PREDICTED: hypothetical protein LOC100697480 [Oreochromis
niloticus]
Length = 304
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 101/134 (75%), Gaps = 8/134 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +EA LG+++ SWH++YKDSA+++VGG P++LTEGDL+ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREASLGVNESVSWHSEYKDSAWIFVGGFPYELTEGDLICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--KK 112
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV Y+ K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFICYEDQRSTILAVDNFNGIKIKGRTIRVDHVKDYRPPKD 120
Query: 113 EEEDEETRQRMREE 126
E+ ++ + +REE
Sbjct: 121 GEDIDDVTKHLREE 134
>gi|355715858|gb|AES05425.1| RNA binding motif protein, X-linked 2 [Mustela putorius furo]
Length = 182
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 99/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 8 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 67
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 68 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 127
Query: 112 KEEEDEETRQ 121
EE D+ T++
Sbjct: 128 SEETDDVTKE 137
>gi|355705153|gb|EHH31078.1| RNA-binding motif protein, X-linked 2, partial [Macaca mulatta]
Length = 321
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 98/129 (75%), Gaps = 9/129 (6%)
Query: 2 NPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGE 61
+PLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q GE
Sbjct: 1 SPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGE 60
Query: 62 IVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KKK 112
IV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 IVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDS 120
Query: 113 EEEDEETRQ 121
EE D+ TRQ
Sbjct: 121 EEMDDVTRQ 129
>gi|109077776|ref|XP_001110036.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Macaca mulatta]
Length = 322
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 101/138 (73%), Gaps = 9/138 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNALTKVKLINELNEEEVKLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG ++ GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKVKGRTIRVDHVSNYRAPKS 120
Query: 112 KEEEDEETRQRMREERGV 129
EE D+ T++ + RG
Sbjct: 121 SEEMDDVTKELHKGSRGA 138
>gi|119632204|gb|EAX11799.1| RNA binding motif protein, X-linked 2, isoform CRA_a [Homo sapiens]
Length = 321
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 98/129 (75%), Gaps = 9/129 (6%)
Query: 2 NPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGE 61
+PLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q GE
Sbjct: 1 SPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGE 60
Query: 62 IVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KKK 112
IV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 61 IVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDS 120
Query: 113 EEEDEETRQ 121
EE D+ TRQ
Sbjct: 121 EEIDDVTRQ 129
>gi|355750033|gb|EHH54371.1| hypothetical protein EGM_15194 [Macaca fascicularis]
Length = 310
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 101/138 (73%), Gaps = 9/138 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNALTKVKLINELNEEEVKLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV++NLVRDK TGK +GF F+ YEDQR +N NG ++ GRTIRVDHV+ Y K
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKVKGRTIRVDHVSNYRAPKS 120
Query: 112 KEEEDEETRQRMREERGV 129
EE D+ T++ + RG
Sbjct: 121 SEEMDDVTKELHKGSRGA 138
>gi|68448493|ref|NP_001020337.1| RNA-binding motif protein, X-linked 2 [Danio rerio]
gi|67678309|gb|AAH96985.1| RNA binding motif protein, X-linked 2 [Danio rerio]
Length = 434
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 89/116 (76%), Gaps = 6/116 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +EA LGI + SWH+ YK+SA+V++GG P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREAQLGIKETVSWHSVYKNSAWVFIGGFPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
EI ++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHVA Y+
Sbjct: 61 EIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYR 116
>gi|410989439|ref|XP_004000969.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Felis catus]
Length = 507
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 105/141 (74%), Gaps = 12/141 (8%)
Query: 2 NPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGE 61
+PLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q GE
Sbjct: 183 SPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGE 242
Query: 62 IVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KKK 112
IV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K
Sbjct: 243 IVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPKDS 302
Query: 113 EEEDEETRQRMREERGVCRAF 133
EE D+ T++ +E+G C AF
Sbjct: 303 EEMDDMTKE--LQEKG-CGAF 320
>gi|330864692|ref|NP_001193477.1| RNA-binding motif protein, X-linked 2-like [Bos taurus]
Length = 330
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 100/138 (72%), Gaps = 11/138 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG+ + SWH +YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVPEKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK-- 112
EIV++NLV DK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y+
Sbjct: 61 EIVNINLVWDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRLPED 120
Query: 113 -EEEDEETRQRMREERGV 129
EE DE TR+ +ERG
Sbjct: 121 SEEMDEVTRE--LQERGC 136
>gi|391339259|ref|XP_003743969.1| PREDICTED: uncharacterized protein LOC100902788 [Metaseiulus
occidentalis]
Length = 322
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 99/143 (69%), Gaps = 8/143 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGIS-DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MNPLT V+ +Q IN +E +G++ + SWH+KYK+SA++Y GG+ FDLTEGDLL +F+Q
Sbjct: 1 MNPLTNVRNLQKINDRELQMGLTGHEKSWHSKYKNSAWIYFGGVSFDLTEGDLLCIFSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKE 113
GEIV++NLVRDK TGK RGF F+ YEDQR +N NGA+I RT RVDHV YK +
Sbjct: 61 GEIVNINLVRDKETGKSRGFGFICYEDQRSTILAIDNFNGAKICNRTFRVDHVENYKPPK 120
Query: 114 EEDE-ETRQRMREERGVCRAFQR 135
+ DE + +M E+G R
Sbjct: 121 DSDEYDELTKMLHEKGCAPEVMR 143
>gi|390352150|ref|XP_791635.3| PREDICTED: RNA-binding motif protein, X-linked 2-like
[Strongylocentrotus purpuratus]
Length = 232
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 101/132 (76%), Gaps = 8/132 (6%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
PLT VK I +N EA G+S ASWH +YKDSAY+++GG+PF+LTEGD+L VF+Q GEI
Sbjct: 29 PLTNVKNINKLNELEAQYGVSSTASWHQQYKDSAYIFIGGMPFELTEGDVLCVFSQYGEI 88
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK--EE 114
V++NLVRDK TGK +G+ F+AYEDQR +N NG ++ GRT+RVDHV++Y+K +E
Sbjct: 89 VNINLVRDKKTGKSKGYCFIAYEDQRSTILAVDNFNGIKLKGRTLRVDHVSEYRKPKDDE 148
Query: 115 EDEETRQRMREE 126
E ++ +++REE
Sbjct: 149 ELDDATKKLREE 160
>gi|50417226|gb|AAH78245.1| Rbmx2 protein [Danio rerio]
Length = 358
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 89/116 (76%), Gaps = 6/116 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +EA LGI + SWH+ YK+SA+V++GG P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREAQLGIKETVSWHSVYKNSAWVFIGGFPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
EI ++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHVA Y+
Sbjct: 61 EIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYR 116
>gi|395509895|ref|XP_003759222.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Sarcophilus
harrisii]
Length = 274
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 102/137 (74%), Gaps = 7/137 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LT+VK I +N +E +LG++++ SWHA+YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNALTKVKLISELNQREVELGLTENVSWHAEYKDSAWIFIGGLPYELTEGDVICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK-KKE 113
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHVA Y+ K+
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIRGRTIRVDHVANYRPPKD 120
Query: 114 EEDEETRQRMREERGVC 130
+ + RM +G C
Sbjct: 121 SRNLDDVTRMLRGKGHC 137
>gi|301619753|ref|XP_002939264.1| PREDICTED: hypothetical protein LOC100497806 [Xenopus (Silurana)
tropicalis]
Length = 280
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 100/133 (75%), Gaps = 8/133 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
+ PLT+VK I +N++EA LG+ D SWH YKDSA++++GG+P++L+EGD++ VF+Q G
Sbjct: 12 ILPLTKVKLINELNAREASLGVKDSVSWHQDYKDSAWLFIGGLPYELSEGDIICVFSQYG 71
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--KK 112
E+V++NLVRDK +G+ RGF F+ +EDQR +NLNG ++ GRTIRVDHVA Y+ K
Sbjct: 72 EVVNINLVRDKSSGRSRGFCFLCFEDQRSTVLAVDNLNGIKVKGRTIRVDHVANYRPPKD 131
Query: 113 EEEDEETRQRMRE 125
E+ +E Q +RE
Sbjct: 132 AEDIDEITQSLRE 144
>gi|74227727|dbj|BAE35704.1| unnamed protein product [Mus musculus]
Length = 165
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/135 (53%), Positives = 101/135 (74%), Gaps = 7/135 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N +E LG+++ SWH++YK SA+++VGG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y+ +E
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQE 120
Query: 115 -EDEETRQRMREERG 128
ED + R +E+G
Sbjct: 121 SEDVDDVTRELQEKG 135
>gi|444517993|gb|ELV11894.1| RNA-binding motif protein, X-linked 2, partial [Tupaia chinensis]
Length = 323
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 100/133 (75%), Gaps = 7/133 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
LT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q GE+V
Sbjct: 1 LTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEVV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK-KKEEED 116
++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y+ K+ E+
Sbjct: 61 NINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEE 120
Query: 117 EETRQRMREERGV 129
+ R+ +E+G
Sbjct: 121 MDDVTRVLQEKGC 133
>gi|307108981|gb|EFN57220.1| hypothetical protein CHLNCDRAFT_14185, partial [Chlorella
variabilis]
Length = 116
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 91/116 (78%), Gaps = 6/116 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQ+K Q I E +LG++D ASWH ++K SAYV+ GG+PF+LTEGDLLAVFAQ G
Sbjct: 1 MNPLTQIKNTQKITKAEIELGLTDKASWHDRFKHSAYVFSGGLPFELTEGDLLAVFAQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
E+VDV+LVRDK TGK RGFAF+AYEDQR +NL GA++ GR IRV+HV Y+
Sbjct: 61 EVVDVHLVRDKKTGKSRGFAFLAYEDQRSTVLAVDNLGGARVAGRVIRVEHVDNYR 116
>gi|296470918|tpg|DAA13033.1| TPA: RNA binding motif protein, X-linked 2-like protein [Bos
taurus]
Length = 417
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 99/138 (71%), Gaps = 11/138 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
+PLT+VK I +N +E LG+ + SWH +YKDSA++++GG+P++LTEGD++ VF+Q G
Sbjct: 88 FSPLTKVKLINELNEREVQLGVPEKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYG 147
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK-- 112
EIV++NLV DK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y+
Sbjct: 148 EIVNINLVWDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRLPED 207
Query: 113 -EEEDEETRQRMREERGV 129
EE DE TR+ +ERG
Sbjct: 208 SEEMDEVTRE--LQERGC 223
>gi|126324405|ref|XP_001377748.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Monodelphis
domestica]
Length = 171
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 94/120 (78%), Gaps = 6/120 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LT+VK I +N +E +LG+++ SWHA+YKDSA+V+VGG+P++LTEGD++ VF+Q G
Sbjct: 1 MNSLTKVKLINELNEREVELGVAEKVSWHAEYKDSAWVFVGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHVA Y+ ++
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIRGRTIRVDHVANYRPPQD 120
>gi|355757697|gb|EHH61222.1| RNA-binding motif protein, X-linked 2 [Macaca fascicularis]
Length = 334
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 95/127 (74%), Gaps = 9/127 (7%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
L +VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q GEIV
Sbjct: 16 LQEVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIV 75
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KKKEE 114
++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y K EE
Sbjct: 76 NINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEE 135
Query: 115 EDEETRQ 121
D+ TRQ
Sbjct: 136 MDDVTRQ 142
>gi|291408201|ref|XP_002720429.1| PREDICTED: CG10466-like [Oryctolagus cuniculus]
Length = 431
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 99/136 (72%), Gaps = 9/136 (6%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
PLT+VK I +N +E LG+++ SWH++YKDSA++++GG+P++LTEGD++ VF+Q GE+
Sbjct: 105 PLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDVICVFSQYGEV 164
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQRN------NLNGAQILGRTIRVDHVAKY---KKKE 113
V++NLVRDK TGK +GF F+ YEDQR+ N NG +I GRTIRVDHVA Y K E
Sbjct: 165 VNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYRVPKVSE 224
Query: 114 EEDEETRQRMREERGV 129
+ D+ TR+ GV
Sbjct: 225 DMDDVTRELQAMGCGV 240
>gi|147906061|ref|NP_001079913.1| RNA binding motif protein, X-linked 2 [Xenopus laevis]
gi|34783857|gb|AAH56844.1| MGC64376 protein [Xenopus laevis]
Length = 272
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 155/290 (53%), Gaps = 31/290 (10%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK I +N++EA LG+ D SWH YKDSA++++GG+PF+LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVKLINELNAREASLGVKDSVSWHQDYKDSAWIFIGGLPFELTEGDVICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--KK 112
E+V++NL RDK +G+ RGF FV +EDQR +NLNG ++ GRTIRVDHVA Y+ K
Sbjct: 61 EVVNINLARDKSSGRSRGFCFVCFEDQRSTVLAVDNLNGIKLKGRTIRVDHVANYRPPKD 120
Query: 113 EEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKF 172
E+ +E Q +RE +G R S ++ + + +
Sbjct: 121 AEDIDEITQTLRE---------KGCAARTPSPTSSSQDEEEEPPRKKKDKKKKKDKSRRK 171
Query: 173 EGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRR 232
EG SS +T + + E + DR R+ + P ED+ SR+
Sbjct: 172 EG-------ESSNST-TKYIKQEPVDSAYDR---ARTTEKVSKVAPENSRALEEDRGSRK 220
Query: 233 HSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGD 282
S++ + S++ H + ++ K E E + D+ R ++ S GR +
Sbjct: 221 RSNS---KGASQDKHKEQHRQKEKYKECEQQMPRDRYREQQEQRSKGRTE 267
>gi|126324409|ref|XP_001377779.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Monodelphis
domestica]
Length = 198
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 93/120 (77%), Gaps = 6/120 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LT+VK I +N +E +LG+++ SWHA+YKDSA+V+VGG+P++LTEGD++ VF+Q G
Sbjct: 1 MNSLTKVKLISELNEREVELGVAEKVSWHAEYKDSAWVFVGGLPYELTEGDIICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIV++NLVRDK T K +GF F+ YEDQR +N NG +I GRTIRVDHVA Y+ ++
Sbjct: 61 EIVNINLVRDKKTRKSKGFCFLCYEDQRSTILAVDNFNGIKIRGRTIRVDHVANYRPPQD 120
>gi|47221432|emb|CAF97350.1| unnamed protein product [Tetraodon nigroviridis]
Length = 180
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/134 (52%), Positives = 99/134 (73%), Gaps = 7/134 (5%)
Query: 2 NPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGE 61
+PLT+VK I +N +EADLG+ + SWH++YKDSA+V++GG P++L+EGD++ VF+Q GE
Sbjct: 1 SPLTKVKLINQLNEREADLGVKETVSWHSEYKDSAWVFIGGFPYELSEGDIICVFSQYGE 60
Query: 62 IVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK-KKEE 114
IV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRT+RVDHV Y+ K+
Sbjct: 61 IVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTLRVDHVKDYRPPKDS 120
Query: 115 EDEETRQRMREERG 128
ED + +M E G
Sbjct: 121 EDIDDVTKMLREEG 134
>gi|145348674|ref|XP_001418770.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579000|gb|ABO97063.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 122
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 92/122 (75%), Gaps = 6/122 (4%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LTQ+K Q +E + G+ ++ASWHA+YK SAYVY GG+ F++TEGD+LAVF+Q G
Sbjct: 1 MNALTQIKNTQKATMREIESGMGEEASWHARYKHSAYVYAGGLAFNMTEGDILAVFSQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+VDVNLVRD+ G+ RGFAF+ Y DQR +NLNGA ++GRTI+VDHV YK K E
Sbjct: 61 EVVDVNLVRDEEKGRSRGFAFICYADQRSTVLAVDNLNGATVVGRTIKVDHVDDYKMKNE 120
Query: 115 ED 116
+D
Sbjct: 121 DD 122
>gi|440898620|gb|ELR50076.1| RNA-binding motif protein, X-linked 2, partial [Bos grunniens
mutus]
Length = 330
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 99/138 (71%), Gaps = 11/138 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
+PLT+VK I +N +E LG+++ SWH +YKDSA++++GG+P++LTEGD++ VF+Q
Sbjct: 1 FSPLTKVKLINELNEREVQLGVAEKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYR 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRNNL------NGAQILGRTIRVDHVAKYKKK-- 112
EIV++NLV DK TGK +GF F+ YEDQR+ + NG +I GRTIRVDHV+ Y+
Sbjct: 61 EIVNINLVPDKKTGKSKGFCFLCYEDQRSTILAVDSFNGIKIKGRTIRVDHVSNYRLPED 120
Query: 113 -EEEDEETRQRMREERGV 129
EE DE TR+ +ERG
Sbjct: 121 SEEMDEVTRE--LQERGC 136
>gi|344276873|ref|XP_003410230.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Loxodonta
africana]
Length = 303
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 100/130 (76%), Gaps = 9/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK+I+ ++ EA+ + +ASWH++YKDS+++++GG+P++LTEGD+L VF+Q G
Sbjct: 1 MNPLTKVKQIKQLSELEAEHSVVAEASWHSQYKDSSWIFLGGLPYELTEGDILCVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK-- 112
EIV++NLVR++ TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y+
Sbjct: 61 EIVNINLVRNRKTGKSKGFCFICYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSSYRPPRA 120
Query: 113 -EEEDEETRQ 121
E+ D+ TR+
Sbjct: 121 SEDVDDMTRE 130
>gi|347964873|ref|XP_309173.5| AGAP000977-PA [Anopheles gambiae str. PEST]
gi|333466517|gb|EAA04971.6| AGAP000977-PA [Anopheles gambiae str. PEST]
Length = 163
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/134 (52%), Positives = 99/134 (73%), Gaps = 11/134 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP+T +K + ++ E DL + +SWH +YK SA+++VGG+P+DLTEGD+L VF+Q G
Sbjct: 1 MNPMTNMKNVTKLS--EQDLKLGGKSSWHDQYKSSAWIFVGGLPYDLTEGDVLCVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
EIV+VNLVRDK TGK +GFAF+ YEDQR +NLNG +++G+T+RVDHV Y K+
Sbjct: 59 EIVNVNLVRDKATGKSKGFAFICYEDQRSTVLAVDNLNGIKLVGKTLRVDHVQDYRPPKE 118
Query: 112 KEEEDEETRQRMRE 125
++ D+ETRQ E
Sbjct: 119 TDKTDDETRQLYME 132
>gi|443916812|gb|ELU37760.1| RNA-binding protein Cwf29 [Rhizoctonia solani AG-1 IA]
Length = 933
Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats.
Identities = 102/284 (35%), Positives = 139/284 (48%), Gaps = 46/284 (16%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
VK I IN++E DLG S ASWH +YKDSAYV++GG+ D+TEGD++ +F+Q GEI+DVN
Sbjct: 4 VKEINAINARELDLG-SQSASWHDQYKDSAYVFIGGLHVDMTEGDVITIFSQYGEIMDVN 62
Query: 67 LVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--KKEEEDEE 118
L RDK TGK RGF F+ YEDQR +NLNGAQ+LGRT+RVDHV YK K + ED E
Sbjct: 63 LPRDKTTGKQRGFGFLMYEDQRSTVLAVDNLNGAQVLGRTLRVDHVQNYKQPKVKGEDGE 122
Query: 119 TRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWG 178
+ + + DG S + P+D + + +K
Sbjct: 123 MEETAEQSLNAKPQMIYDDAEESDGGSVS------SAPSIDPEDPMASYLLQK------- 169
Query: 179 KNDSSSRATGSGRVALEGNPNQSDRREEK------------------RSIRHDHREKPRE 220
+ + +R+ G + E + + DR E ++ D +
Sbjct: 170 RREEKARSKGKDK---EKSKRKRDRTNETPEERRARKERKRAKREAKEGVKRDRDQHTSS 226
Query: 221 DHGRREDKRSRR--HSDNNEFEARSREDHYRRDEKRPKRHESES 262
D RR+ R RR N E R R + RP RH S S
Sbjct: 227 DTKRRDHSRERRVYEKRNGSLEREDRHGRDRSEYDRP-RHSSRS 269
>gi|312072049|ref|XP_003138888.1| hypothetical protein LOAG_03303 [Loa loa]
gi|307765946|gb|EFO25180.1| hypothetical protein LOAG_03303 [Loa loa]
Length = 312
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 95/132 (71%), Gaps = 11/132 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGI--SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNPLT +++ IN +E LG S SWH KY +SA++YVGG+PFDL EGD++AVF+Q
Sbjct: 1 MNPLTNIRKQNKINERELLLGFTGSSSKSWHQKYSNSAWIYVGGLPFDLNEGDVIAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK 112
GEIV++NL+RD+ TGK RGFAFV YEDQR +N NG ++L R IRVDHV +YK
Sbjct: 61 YGEIVNINLIRDRKTGKSRGFAFVCYEDQRSTILAVDNFNGIKLLKRIIRVDHVEEYKVP 120
Query: 113 ---EEEDEETRQ 121
E+ DEETR+
Sbjct: 121 KYHEDIDEETRK 132
>gi|427782335|gb|JAA56619.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 812
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 89/123 (72%), Gaps = 7/123 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK I +N E LG+++ SWH KYKDSA++++GG+ + LTEGD++ VF+Q G
Sbjct: 1 MNPLTNVKNITKLNETELKLGVTEKTSWHKKYKDSAWIFIGGLDYQLTEGDVICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NLNGAQILGRTIRVDHVAKYK-KKE 113
E+V++NL+RDK TGK +G+ F+ YEDQR+ NLNG + RTIRVDHV Y+ K+
Sbjct: 61 EVVNINLIRDKKTGKSKGYCFLCYEDQRSTVLSVDNLNGISLCKRTIRVDHVENYRPPKD 120
Query: 114 EED 116
ED
Sbjct: 121 SED 123
>gi|198436817|ref|XP_002127336.1| PREDICTED: similar to RNA binding motif protein, X-linked 2 [Ciona
intestinalis]
Length = 377
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 103/139 (74%), Gaps = 10/139 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGIS-DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MN LT+++ I +N+KE G++ +SWH +YKDSA+VYVG +PF+L+EGD++ V +Q
Sbjct: 1 MNVLTKIRLINELNAKELRSGVAGTSSSWHNQYKDSAWVYVGSLPFELSEGDVICVMSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKE 113
GE+V++NL+RD+ TGK +GFAFV YEDQ+ +NLNG++I GR +RVDHV Y+ +
Sbjct: 61 GEVVNINLIRDRKTGKSKGFAFVCYEDQKSTILAVDNLNGSKIKGRQMRVDHVLAYQVPK 120
Query: 114 EEDE--ETRQRMREERGVC 130
E+DE E +R+R ERGV
Sbjct: 121 EDDEVDEVTERIR-ERGVA 138
>gi|170572253|ref|XP_001892040.1| RNA binding motif protein [Brugia malayi]
gi|158603075|gb|EDP39148.1| RNA binding motif protein, putative [Brugia malayi]
Length = 168
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 97/136 (71%), Gaps = 11/136 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGI--SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNPLT ++ IN +E LG S+ SWH KY DSA++Y+GG+P+DL EGD++AVF+Q
Sbjct: 1 MNPLTNIRNQNKINDRELLLGFTGSNSKSWHQKYSDSAWIYIGGLPYDLNEGDVIAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK 112
GEIV++NL+RD+ TGK RGFAFV YEDQR +N NG ++L R IRVDHV +YK
Sbjct: 61 YGEIVNINLIRDRKTGKSRGFAFVCYEDQRSTILAVDNFNGIKLLKRIIRVDHVEEYKVP 120
Query: 113 ---EEEDEETRQRMRE 125
E+ DEETR+ + +
Sbjct: 121 KYHEDIDEETRKILED 136
>gi|221129809|ref|XP_002164481.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Hydra
magnipapillata]
Length = 255
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 104/148 (70%), Gaps = 10/148 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISD-DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MNPLT V+ I +N ++ GI D + +WH++YKDSA++++GG+P+DLTEGD+LAVF+Q
Sbjct: 1 MNPLTNVRNIGKLNDQDLQNGIFDHNLTWHSQYKDSAFIFIGGLPYDLTEGDVLAVFSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--K 111
GEIV++NLVRDK TGK +G+ F+ YEDQR +N NG ++ GRTIRVDHV +Y+ K
Sbjct: 61 GEIVNINLVRDKKTGKFKGYGFLCYEDQRSTILAVDNFNGIKLGGRTIRVDHVGEYRPPK 120
Query: 112 KEEEDEETRQRMREERGVCRAFQRGECT 139
+E+DE + + + E C CT
Sbjct: 121 GDEKDESGKYKDKVEVS-CAPRTPSPCT 147
>gi|402582034|gb|EJW75980.1| Rbmx2 protein, partial [Wuchereria bancrofti]
Length = 147
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 96/132 (72%), Gaps = 11/132 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGI--SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNPLT ++ IN +E LG S++ SWH KY DSA++Y+GG+P+DL EGD++AVF+Q
Sbjct: 1 MNPLTNIREQNKINDRELLLGFTGSNNKSWHQKYSDSAWIYIGGLPYDLNEGDVIAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK 112
GEIV++NL+RD+ TGK RGFAFV YEDQR +N NG ++L R IRVDHV +YK
Sbjct: 61 YGEIVNINLIRDRKTGKSRGFAFVCYEDQRSTILAVDNFNGIKLLKRIIRVDHVEEYKVP 120
Query: 113 ---EEEDEETRQ 121
E+ DEETR+
Sbjct: 121 KYHEDIDEETRK 132
>gi|308806371|ref|XP_003080497.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
gi|116058957|emb|CAL54664.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
Length = 252
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 95/136 (69%), Gaps = 6/136 (4%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LTQ++R Q IN +E G ASWH +++ SAYVY GG+PF LTEGD+L VF+Q G
Sbjct: 1 MNALTQIQRTQKINVEEVASGRDVSASWHDQFRHSAYVYAGGLPFALTEGDVLCVFSQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIVDVN+VR++ TGK RGFAFV Y DQR +NLNG+ + GR IRV+HV Y+ K
Sbjct: 61 EIVDVNVVREEETGKSRGFAFVCYADQRSTVLAVDNLNGSTVGGRIIRVEHVDDYRAKNP 120
Query: 115 EDEETRQRMREERGVC 130
E++E R+ RE + C
Sbjct: 121 EEKEGREVEREWKCAC 136
>gi|302854208|ref|XP_002958614.1| hypothetical protein VOLCADRAFT_69624 [Volvox carteri f.
nagariensis]
gi|300256075|gb|EFJ40351.1| hypothetical protein VOLCADRAFT_69624 [Volvox carteri f.
nagariensis]
Length = 134
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 93/125 (74%), Gaps = 6/125 (4%)
Query: 6 QVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
Q+K Q +E + GI D ASWHA++K SAYV+ GG+ ++LTEGDLLAVF+Q GEIVD+
Sbjct: 1 QIKNTQKATKREIEAGIQDSASWHAQFKHSAYVFAGGLDYELTEGDLLAVFSQYGEIVDL 60
Query: 66 NLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDEET 119
NL+R K TGK +GFAF+AYEDQR +NLNGA+++GRTIRV+HV YKK++ E
Sbjct: 61 NLIRHKDTGKSKGFAFIAYEDQRSTILAVDNLNGAKVVGRTIRVEHVDNYKKRKAEVRLA 120
Query: 120 RQRMR 124
+ + R
Sbjct: 121 KLKAR 125
>gi|212534622|ref|XP_002147467.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210069866|gb|EEA23956.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 267
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 93/121 (76%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + ++ +ASWHA Y+D+AY+Y+GG+PFDL+EGD++ +F+Q GE V
Sbjct: 1 MNSIRQIQALNKRELENAVTPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
VNL+RDK TGK +GFAF+ YEDQR +NL GA ++GR +RVDH +YK+KEEE E
Sbjct: 61 HVNLIRDKDTGKSKGFAFLKYEDQRSTDLAVDNLGGATVMGRVLRVDH-TRYKRKEEEGE 119
Query: 118 E 118
E
Sbjct: 120 E 120
>gi|406859423|gb|EKD12489.1| RNA binding domain protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 304
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 92/121 (76%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + G+S +ASWH Y+D+AY+Y+GG+PF+L+EGD++ +F+Q GE
Sbjct: 1 MQSIRQIQELNKRELEAGVSPEASWHTDYRDTAYIYIGGLPFELSEGDVVTIFSQFGEPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NL+RDK TGK +GFAF+ YEDQR +NL G I+GRT++VDH +YKKK++E E
Sbjct: 61 YINLIRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGTVIMGRTLKVDHT-RYKKKDDEKE 119
Query: 118 E 118
E
Sbjct: 120 E 120
>gi|58271546|ref|XP_572929.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115110|ref|XP_773853.1| hypothetical protein CNBH3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256481|gb|EAL19206.1| hypothetical protein CNBH3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229188|gb|AAW45622.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 373
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 87/115 (75%), Gaps = 8/115 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ I IN +E +LG+ SWH +YKDSAY+YVGG+PF+LTEGDL+ +F+Q GEI+
Sbjct: 1 MNTIREINRINERELELGVK--GSWHDEYKDSAYIYVGGLPFELTEGDLITIFSQWGEIM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK 112
DVNLVRDK TGK RGF F+ YEDQR +N+NG Q++GRT++VDH Y+++
Sbjct: 59 DVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDNMNGTQVIGRTLKVDHTRNYRQQ 113
>gi|390601583|gb|EIN10977.1| hypothetical protein PUNSTDRAFT_63827 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 315
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 88/112 (78%), Gaps = 7/112 (6%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
V+ I IN +E DLG+S ASWH +YKDSAY+Y+GG+ ++LTEGD++ +F+Q GE +DVN
Sbjct: 23 VREINKINQRELDLGLSG-ASWHDEYKDSAYIYIGGLNYELTEGDIITIFSQYGEPLDVN 81
Query: 67 LVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK 112
LVRDK TGK +GFAF+ YEDQR +NLNGAQ+L RT+RVDHV YK+K
Sbjct: 82 LVRDKETGKSKGFAFLMYEDQRSTVLAVDNLNGAQVLNRTLRVDHVRDYKQK 133
>gi|342319853|gb|EGU11798.1| RNA-binding protein Cwf29 [Rhodotorula glutinis ATCC 204091]
Length = 300
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 97/133 (72%), Gaps = 8/133 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ I+ IN +E G + ASWH +YKDSAY+ VGG+P++LTEGD++ +F+Q GEIV
Sbjct: 1 MNQIQAIKRINEQELQSGSA--ASWHDQYKDSAYINVGGLPYNLTEGDVITIFSQYGEIV 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
D+N+ RD TGKPRGFA++ Y DQR +NLNGAQ+LGRT+RVDHV YK+ E + E
Sbjct: 59 DINMPRDPQTGKPRGFAWLMYADQRSTVLAVDNLNGAQVLGRTLRVDHVLNYKQLERDQE 118
Query: 118 ETRQRMREERGVC 130
+ + R+E+ +
Sbjct: 119 SGKMKERDEQSLA 131
>gi|157129340|ref|XP_001655377.1| RNA-binding protein, putative [Aedes aegypti]
gi|108882112|gb|EAT46337.1| AAEL002461-PA [Aedes aegypti]
Length = 138
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 99/133 (74%), Gaps = 10/133 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP+T +K + ++ E DL SWH +YKDSA+++VGG+P +LTEGDLLAVF+Q G
Sbjct: 1 MNPMTNMKNVLKLS--EQDLNYGGKNSWHDQYKDSAWIFVGGLPSELTEGDLLAVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--KK 112
EIV++NLVRDK TGK +GF+F+ +EDQR +N+NG ++LGRT+RVDHV+ YK K
Sbjct: 59 EIVNINLVRDKKTGKSKGFSFICFEDQRSTVLTVDNMNGIKLLGRTLRVDHVSDYKPPKD 118
Query: 113 EEEDEETRQRMRE 125
++ DEET++ E
Sbjct: 119 DKADEETKRLYME 131
>gi|321474055|gb|EFX85021.1| hypothetical protein DAPPUDRAFT_194198 [Daphnia pulex]
Length = 247
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 93/130 (71%), Gaps = 6/130 (4%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK I+ ++ E IS ASWH +YKDSA++++GG+P++L+EGD++ +F+Q G
Sbjct: 1 MNPLTNVKNIKKLSETELKYNISGKASWHYQYKDSAWIFIGGLPYELSEGDIICIFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+ ++NLVRDK TGK +GF F+ YEDQR +NLN ++ GRT+RVDHV +YK ++
Sbjct: 61 EVANINLVRDKVTGKSKGFCFLCYEDQRSTILAVDNLNSIKVCGRTLRVDHVEQYKIPKD 120
Query: 115 EDEETRQRMR 124
D+ +R
Sbjct: 121 PDKLDEDALR 130
>gi|402226055|gb|EJU06115.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 292
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 88/116 (75%), Gaps = 8/116 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ VK IQ IN E LG SWH +YKDSAY+++GG+P++LTEGD++++F+Q GE V
Sbjct: 1 MNVVKEIQKINEHELQLGTR--GSWHDQYKDSAYIFIGGLPYELTEGDVISIFSQYGEPV 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKE 113
+VN+ RDK TGKP+GFAF+ YEDQ+ +NLNGA I+GRTIRVDHV+KYK E
Sbjct: 59 NVNMPRDKVTGKPKGFAFLMYEDQQSTVLAVDNLNGANIVGRTIRVDHVSKYKNLE 114
>gi|112983436|ref|NP_001037638.1| RNA binding motif protein X-linked 2 [Bombyx mori]
gi|109706821|gb|ABG42997.1| RNA binding motif protein X-linked 2 [Bombyx mori]
Length = 181
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 89/116 (76%), Gaps = 8/116 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP+T VK + ++ E +LG S SWH +YKDSA+++VGG+P+D TEGD++ VF+Q G
Sbjct: 1 MNPMTNVKNVLKLS--EHELGSSSKTSWHDQYKDSAWIFVGGLPYDWTEGDVICVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
EIV++N+VRDK TGKP+GFAF+ YEDQR +NLN +ILGRT+RVDH +YK
Sbjct: 59 EIVNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTLRVDHCEQYK 114
>gi|383847795|ref|XP_003699538.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Megachile
rotundata]
Length = 139
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 99/135 (73%), Gaps = 12/135 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK I+ + +E L SWH +YKDSA++++GG+P+DLTEGD++ +F+Q G
Sbjct: 1 MNPLTNVKNIKKLGEQE--LLTDRKVSWHDQYKDSAWIFIGGLPYDLTEGDVVTIFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+V++NL+RDK TGK +G+ F+ YEDQR +N NG +ILGRTIRVDHVA YK ++
Sbjct: 59 EVVNINLIRDKDTGKQKGYGFLCYEDQRSTILAVDNFNGTKILGRTIRVDHVANYKAPKD 118
Query: 115 E---DEETRQRMREE 126
DEET+ R+R+E
Sbjct: 119 SKNIDEETK-RLRKE 132
>gi|238499545|ref|XP_002381007.1| RNA recognition motif containing protein, putative [Aspergillus
flavus NRRL3357]
gi|83772685|dbj|BAE62813.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692760|gb|EED49106.1| RNA recognition motif containing protein, putative [Aspergillus
flavus NRRL3357]
gi|391869311|gb|EIT78510.1| putative RNA-binding protein [Aspergillus oryzae 3.042]
Length = 291
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 93/120 (77%), Gaps = 7/120 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + I +ASWHA Y+D+AY+Y+GG+PFDL+EGD++ +F+Q GE V
Sbjct: 1 MNAIRQIQSLNKRELENAIPPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
VNLVRDK TGK RGFAF+ YEDQR +NL G+ +LGR +RVDHV +YK++++E+E
Sbjct: 61 HVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGSTVLGRILRVDHV-RYKRRDDEEE 119
>gi|328772157|gb|EGF82196.1| hypothetical protein BATDEDRAFT_34645 [Batrachochytrium
dendrobatidis JAM81]
Length = 153
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 87/110 (79%), Gaps = 6/110 (5%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
+K IQ +N+ E + G++D SWH +YKDSAY+Y+GG+P+ LTEGD++ VF+Q GE+VD++
Sbjct: 20 IKEIQKLNALELERGLTDKGSWHNQYKDSAYIYIGGLPYHLTEGDVICVFSQFGEVVDLD 79
Query: 67 LVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
+VRDK TGK +GFAF+AYEDQR +NLNG QI GR IRVDH AKY+
Sbjct: 80 MVRDKETGKSKGFAFLAYEDQRSTVLAVDNLNGIQISGRVIRVDHTAKYR 129
>gi|384245417|gb|EIE18911.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 160
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 89/135 (65%), Gaps = 20/135 (14%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLTQ+K Q E GISD ASWHAK+K SAY++ GG+ + LTEGDLLAVF+Q G
Sbjct: 1 MNPLTQIKNTQKATKLEIVSGISDSASWHAKFKHSAYIFAGGLAYTLTEGDLLAVFSQYG 60
Query: 61 EIVDVNLVR--------------DKGTGKPRGFAFVAYEDQRN------NLNGAQILGRT 100
EIVDVNLVR DK TGK RGFAF+AYEDQR+ NL+GA++ GR
Sbjct: 61 EIVDVNLVRQGSSQPISCLAIPLDKETGKSRGFAFLAYEDQRSTVLAVDNLSGAKVAGRV 120
Query: 101 IRVDHVAKYKKKEEE 115
+ V+HV YK K E
Sbjct: 121 VTVNHVDNYKVKRAE 135
>gi|258570729|ref|XP_002544168.1| U2 snRNP component IST3 [Uncinocarpus reesii 1704]
gi|237904438|gb|EEP78839.1| U2 snRNP component IST3 [Uncinocarpus reesii 1704]
Length = 263
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 92/118 (77%), Gaps = 7/118 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + +S +ASWHA Y+D+AY+Y+GG+P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNSIRQIQALNKRELENAVSPEASWHADYRDTAYIYIGGLPYDLSEGDILTIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
+NLVRDK TGK +GFAF+ YEDQR +NL GA I+GR +RVDH+ +YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLCGANIMGRLLRVDHM-RYKRKEEE 117
>gi|405960385|gb|EKC26312.1| RNA-binding motif protein, X-linked 2 [Crassostrea gigas]
Length = 233
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 93/121 (76%), Gaps = 10/121 (8%)
Query: 13 INSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKG 72
+N +E +LG+ SWH +YKDSA+V++GG+P+DLTEGD++AVF+Q GE+V++NLVRD
Sbjct: 1 MNERELELGLIGKKSWHDQYKDSAWVFIGGLPYDLTEGDVIAVFSQYGELVNINLVRDGK 60
Query: 73 TGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE---EDEET-RQR 122
TGK RGF F+ YEDQR +NLNG ++LGRTIRVDHV KYK +E EDEET R R
Sbjct: 61 TGKSRGFCFLCYEDQRSTVLAVDNLNGIKLLGRTIRVDHVEKYKVPKEHGDEDEETMRVR 120
Query: 123 M 123
M
Sbjct: 121 M 121
>gi|119183786|ref|XP_001242884.1| hypothetical protein CIMG_06780 [Coccidioides immitis RS]
gi|392865790|gb|EAS31617.2| U2 snRNP component IST3 [Coccidioides immitis RS]
Length = 269
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 92/118 (77%), Gaps = 7/118 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + +S +ASWHA Y+D+AY+Y+GG+P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNSIRQIQALNKRELETAVSPEASWHADYRDTAYIYIGGLPYDLSEGDILTIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
+NLVRDK TGK +GFAF+ YEDQR +NL GA ++GR +RVDH+ +YK+KEEE
Sbjct: 61 HLNLVRDKDTGKSKGFAFLKYEDQRSTDLAVDNLCGATVMGRLLRVDHM-RYKRKEEE 117
>gi|425774283|gb|EKV12592.1| hypothetical protein PDIP_51790 [Penicillium digitatum Pd1]
gi|425776284|gb|EKV14506.1| hypothetical protein PDIG_32200 [Penicillium digitatum PHI26]
Length = 281
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 95/121 (78%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N +E + I +ASWHA Y+D+AY+Y+GG+PFDL+EGD++A+F+Q GE V
Sbjct: 1 MNSIRQVQALNKRELEHAIPPEASWHADYRDTAYIYIGGLPFDLSEGDVIAIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
VNLVRDK TGK +GFAF+ YEDQR +NL GA ++GR +RVDH A+YK+K++E+E
Sbjct: 61 HVNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATVMGRLLRVDH-ARYKRKDDEEE 119
Query: 118 E 118
+
Sbjct: 120 Q 120
>gi|156543304|ref|XP_001603981.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Nasonia
vitripennis]
Length = 139
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 97/136 (71%), Gaps = 13/136 (9%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP+T VK I + +E LG SWH YKDSA++++GG+P+DLTEGD++AVF+Q G
Sbjct: 1 MNPMTNVKNIAKLGLQE--LGSDRKGSWHDDYKDSAWIFIGGLPYDLTEGDVIAVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK-- 112
EIV++NLVRDK TGK +G+ F+ YEDQR +NLNG +ILGRTIRVDHV YK
Sbjct: 59 EIVNINLVRDKDTGKQKGYGFLCYEDQRSTILAVDNLNGIKILGRTIRVDHVKDYKPPKV 118
Query: 113 --EEEDEETRQRMREE 126
+ DEET+ R+R E
Sbjct: 119 GSKNVDEETK-RLRLE 133
>gi|291400895|ref|XP_002716702.1| PREDICTED: RNA binding motif protein, X-linked 2 [Oryctolagus
cuniculus]
Length = 198
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 100/135 (74%), Gaps = 11/135 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK ++ ++ +EA + + SWH+ Y+DSA+V+VGG+P++LTEGD+L VF+Q G
Sbjct: 1 MNPLTKVKLVRELSEREAGM-VPPKVSWHSMYRDSAWVFVGGLPYELTEGDILCVFSQYG 59
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK-- 112
EIV+++LVRDK TGK RGF F+ YEDQR +N NG +I GRTIRVDH + Y+
Sbjct: 60 EIVNIHLVRDKKTGKSRGFGFICYEDQRSTVLAVDNFNGIKIKGRTIRVDHASNYRPPRD 119
Query: 113 -EEEDEETRQRMREE 126
E+ D+ TR+ +RE+
Sbjct: 120 SEDIDDVTRE-LREK 133
>gi|226286984|gb|EEH42497.1| RNA binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 280
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 90/118 (76%), Gaps = 7/118 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N KE + + +ASWHA Y+D+AY+Y+G +P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNAIRQVQALNKKELENVVPPEASWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
+NLVRDK TGK +GFAF+ YEDQR +NL GA ILGR IRVDHV +YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDHV-RYKRKEEE 117
>gi|303320035|ref|XP_003070017.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109703|gb|EER27872.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320034356|gb|EFW16301.1| U2 snRNP component IST3 [Coccidioides posadasii str. Silveira]
Length = 271
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 92/118 (77%), Gaps = 7/118 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + +S +ASWHA Y+D+AY+Y+GG+P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNSIRQIQALNKRELETAVSPEASWHADYRDTAYIYIGGLPYDLSEGDILTIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
+NLVRDK TGK +GFAF+ YEDQR +NL GA ++GR +RVDH+ +YK+KEEE
Sbjct: 61 HLNLVRDKDTGKSKGFAFLKYEDQRSTDLAVDNLCGATVMGRLLRVDHM-RYKRKEEE 117
>gi|443697654|gb|ELT98021.1| hypothetical protein CAPTEDRAFT_86725, partial [Capitella teleta]
Length = 156
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 95/125 (76%), Gaps = 10/125 (8%)
Query: 7 VKRIQHINSKEADLGISDD-ASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
++ + IN +E +LG++ ASWH ++K+SA+VY GG+P+DLTEGD++ VF+Q GEIV+V
Sbjct: 1 IRNLNKINERELELGLAGSGASWHKEFKESAWVYCGGLPYDLTEGDVVCVFSQYGEIVNV 60
Query: 66 NLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE---ED 116
NL+RDKGTGK +GF F+ YEDQR +NLNG +ILGRTIRVDHV YK +E ED
Sbjct: 61 NLIRDKGTGKSKGFCFLCYEDQRSTILAVDNLNGFKILGRTIRVDHVKDYKAPKEHGDED 120
Query: 117 EETRQ 121
E TR+
Sbjct: 121 EVTRK 125
>gi|225683370|gb|EEH21654.1| U2 snRNP component IST3 [Paracoccidioides brasiliensis Pb03]
Length = 280
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 90/118 (76%), Gaps = 7/118 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N KE + + +ASWHA Y+D+AY+Y+G +P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNAIRQVQALNKKELENVVPPEASWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
+NLVRDK TGK +GFAF+ YEDQR +NL GA ILGR IRVDHV +YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDHV-RYKRKEEE 117
>gi|327352804|gb|EGE81661.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 278
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 90/118 (76%), Gaps = 7/118 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N KE + + +ASWHA Y+D+AY+Y+G +P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNAIRQVQELNKKELENVVPPEASWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
+NLVRDK TGK +GFAF+ YEDQR +NL GA +LGR IRVDHV +YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATVLGRMIRVDHV-RYKRKEEE 117
>gi|170060753|ref|XP_001865940.1| RNA-binding motif protein [Culex quinquefasciatus]
gi|167879121|gb|EDS42504.1| RNA-binding motif protein [Culex quinquefasciatus]
Length = 137
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 98/133 (73%), Gaps = 10/133 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP+T +K + ++ E DL SWH +Y+DSA+++VGG+P +LTEGDLLAVF+Q G
Sbjct: 1 MNPMTNMKNVLKLS--EQDLKFGGKNSWHDQYRDSAWIFVGGLPSELTEGDLLAVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--KK 112
EIV++NLVRD+ TGK +GF F+ +EDQR +NLNG ++LGRT+RVDHV+ YK K
Sbjct: 59 EIVNINLVRDRKTGKSKGFGFICFEDQRSTVLTVDNLNGIKLLGRTLRVDHVSDYKPPKD 118
Query: 113 EEEDEETRQRMRE 125
++ DEETR+ E
Sbjct: 119 DKADEETRRLYME 131
>gi|405122146|gb|AFR96913.1| RNA-binding protein [Cryptococcus neoformans var. grubii H99]
Length = 508
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 88/116 (75%), Gaps = 8/116 (6%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
++ I IN +E +LG+ SWH +YK+SAY+YVGG+PF+LTEGDL+ +F+Q GEI+DVN
Sbjct: 133 IREINRINERELELGVK--GSWHDEYKESAYIYVGGLPFELTEGDLITIFSQWGEIMDVN 190
Query: 67 LVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
LVRDK TGK RGF F+ YEDQR +N+NG QI+GRT++VDH Y+++ + D
Sbjct: 191 LVRDKETGKSRGFGFLMYEDQRSTVLAVDNMNGTQIIGRTLKVDHTRNYRQQGKRD 246
>gi|115398724|ref|XP_001214951.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
gi|114191834|gb|EAU33534.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
Length = 292
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 93/120 (77%), Gaps = 7/120 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + + +ASWHA Y+D+AY+Y+GG+P+DL+EGD++ +F+Q GE V
Sbjct: 1 MNSIRQIQSLNKRELENAVPPEASWHADYRDTAYIYIGGLPYDLSEGDVVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
VNLVRDK TGK RGFAF+ YEDQR +NL GA +LGR +RVDHV +YK++++E+E
Sbjct: 61 HVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRMLRVDHV-RYKRRDDEEE 119
>gi|255949586|ref|XP_002565560.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592577|emb|CAP98933.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 279
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 94/121 (77%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N +E + I +ASWHA Y+D+AY+Y+GG+PFDL+EGD++ +F+Q GE V
Sbjct: 1 MNSIRQVQALNKRELEHAIPPEASWHADYRDTAYIYIGGLPFDLSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
VNLVRDK TGK +GFAF+ YEDQR +NL GA ++GR +RVDH A+YK+K++E+E
Sbjct: 61 HVNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATVMGRLLRVDH-ARYKRKDDEEE 119
Query: 118 E 118
+
Sbjct: 120 Q 120
>gi|388582029|gb|EIM22335.1| hypothetical protein WALSEDRAFT_56985 [Wallemia sebi CBS 633.66]
Length = 218
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 89/121 (73%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +VK IQ +N KE L +SD ASWH +YK SAYVY+GG+ LTEGD++ + +Q GEI
Sbjct: 1 MNKVKHIQSLNEKELQLNLSD-ASWHDQYKHSAYVYIGGLVTGLTEGDVITILSQFGEIA 59
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
D+N+ +DK TGK RGFAFV YEDQR +NLNG+ +LGRT+RVDHV KY + + ++E
Sbjct: 60 DINMPKDKATGKSRGFAFVMYEDQRSTVLAVDNLNGSTVLGRTLRVDHVDKYSQPKVKNE 119
Query: 118 E 118
E
Sbjct: 120 E 120
>gi|134076074|emb|CAK39433.1| unnamed protein product [Aspergillus niger]
Length = 289
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 93/120 (77%), Gaps = 7/120 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + I +ASWHA Y+D+AY+Y+GG+P+DL+EGD++ +F+Q GE V
Sbjct: 1 MNNIRQIQALNKRELENAIPPEASWHADYRDTAYIYIGGLPYDLSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NLVRDK TGK RGFAF+ YEDQR +NL GA +LGR +RVDHV +YK++++E+E
Sbjct: 61 HINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDEEE 119
>gi|350423156|ref|XP_003493401.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Bombus
impatiens]
Length = 139
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 100/135 (74%), Gaps = 12/135 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK I+ + +E L + SWH +Y DSA++++GG+P+DLTEGD++ VF+Q G
Sbjct: 1 MNPLTNVKNIKKLGEQE--LVSNRSTSWHDQYGDSAWIFIGGLPYDLTEGDVITVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+V++NL+RDK TGK +G+ F+ YE+Q+ +NLNG +ILGRTIRVDHVA YK ++
Sbjct: 59 EVVNINLIRDKNTGKQKGYGFLCYENQKSTVLAVDNLNGIKILGRTIRVDHVANYKAPKD 118
Query: 115 E---DEETRQRMREE 126
DEET+ R+R+E
Sbjct: 119 SKNVDEETK-RLRKE 132
>gi|317150318|ref|XP_001823946.2| U2 snRNP component ist3 [Aspergillus oryzae RIB40]
Length = 221
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 93/120 (77%), Gaps = 7/120 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + I +ASWHA Y+D+AY+Y+GG+PFDL+EGD++ +F+Q GE V
Sbjct: 1 MNAIRQIQSLNKRELENAIPPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
VNLVRDK TGK RGFAF+ YEDQR +NL G+ +LGR +RVDHV +YK++++E+E
Sbjct: 61 HVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGSTVLGRILRVDHV-RYKRRDDEEE 119
>gi|261202032|ref|XP_002628230.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239590327|gb|EEQ72908.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 258
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 90/118 (76%), Gaps = 7/118 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N KE + + +ASWHA Y+D+AY+Y+G +P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNAIRQVQELNKKELENVVPPEASWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
+NLVRDK TGK +GFAF+ YEDQR +NL GA +LGR IRVDHV +YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATVLGRMIRVDHV-RYKRKEEE 117
>gi|321262344|ref|XP_003195891.1| hypothetical protein CGB_H5040W [Cryptococcus gattii WM276]
gi|317462365|gb|ADV24104.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 401
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 87/115 (75%), Gaps = 8/115 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ I IN +E +LG+ SWH +YKDSAY+YVGG+PF+LTEGDL+ +F+Q GEI+
Sbjct: 1 MNTIREINRINERELELGVK--GSWHDEYKDSAYIYVGGLPFELTEGDLITIFSQWGEIM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK 112
DVNLVRDK TGK RGF F+ YEDQR +N+NG Q++GRT++VDH Y+++
Sbjct: 59 DVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDNMNGTQVMGRTLKVDHTRNYRQQ 113
>gi|358368597|dbj|GAA85213.1| RNA binding domain protein [Aspergillus kawachii IFO 4308]
Length = 289
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 93/120 (77%), Gaps = 7/120 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + IS +ASWHA Y+D+AY+Y+GG+P+DL+EGD++ +F+Q GE V
Sbjct: 1 MNNIRQIQALNKRELENAISPEASWHADYRDTAYIYIGGLPYDLSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NLVRDK TGK RGF F+ YEDQR +NL GA +LGR +RVDHV +YK++++E+E
Sbjct: 61 HINLVRDKETGKSRGFCFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDEEE 119
>gi|303272303|ref|XP_003055513.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463487|gb|EEH60765.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 104
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 82/101 (81%), Gaps = 6/101 (5%)
Query: 20 LGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGF 79
LG+S+ ASWHAKYK SAYV+ GG+ FDLTEGD+LAVF+Q GEIVDVNLVR + TGK RGF
Sbjct: 4 LGLSEGASWHAKYKHSAYVFAGGLSFDLTEGDVLAVFSQYGEIVDVNLVRHEDTGKSRGF 63
Query: 80 AFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
AF+ YEDQR +NLNGA++LGR I+VDHV YK K+E
Sbjct: 64 AFICYEDQRSTVLAVDNLNGAKVLGRIIKVDHVEDYKLKDE 104
>gi|121713176|ref|XP_001274199.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
gi|119402352|gb|EAW12773.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
Length = 284
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 92/120 (76%), Gaps = 7/120 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ Q +N +E + + +ASWHA Y+D+AY+Y+GG+PFD++EGD++ +F+Q GE V
Sbjct: 1 MNAIRQTQALNKRELENAVPPEASWHADYRDTAYIYIGGLPFDISEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
VNL+RDK TGK RGFAF+ YEDQR +NL GA +LGR +RVDH A+YKK+++E+E
Sbjct: 61 HVNLIRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRILRVDH-ARYKKRDDEEE 119
>gi|67536990|ref|XP_662269.1| hypothetical protein AN4665.2 [Aspergillus nidulans FGSC A4]
gi|40741517|gb|EAA60707.1| hypothetical protein AN4665.2 [Aspergillus nidulans FGSC A4]
gi|259482500|tpe|CBF77042.1| TPA: hypothetical protein ANIA_04665 [Aspergillus nidulans FGSC A4]
Length = 279
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 93/122 (76%), Gaps = 8/122 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N +E + + +ASWHA Y+D+AY+Y+GG+PFDL+EGD++ +F+Q GE V
Sbjct: 1 MNNIRQVQALNKRELEHAVPPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NLVRDK TGK RGFAF+ YEDQR +NL GA +LGR +RVDH +YKK+ +EDE
Sbjct: 61 HINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHT-RYKKR-DEDE 118
Query: 118 ET 119
+T
Sbjct: 119 DT 120
>gi|317029441|ref|XP_001391597.2| U2 snRNP component ist3 [Aspergillus niger CBS 513.88]
Length = 280
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 93/120 (77%), Gaps = 7/120 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + I +ASWHA Y+D+AY+Y+GG+P+DL+EGD++ +F+Q GE V
Sbjct: 1 MNNIRQIQALNKRELENAIPPEASWHADYRDTAYIYIGGLPYDLSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NLVRDK TGK RGFAF+ YEDQR +NL GA +LGR +RVDHV +YK++++E+E
Sbjct: 61 HINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDEEE 119
>gi|392568432|gb|EIW61606.1| hypothetical protein TRAVEDRAFT_69926 [Trametes versicolor
FP-101664 SS1]
Length = 333
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 91/132 (68%), Gaps = 8/132 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ VK I IN +E DL SWH YKDSAY++ GG+ +LTEGD++ +F+Q GEI+
Sbjct: 1 MNVVKEINKINERELDLDTK--GSWHDDYKDSAYIFAGGLNTELTEGDVITIFSQYGEIM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
DVN+ RDK TGKP+GFAFV YEDQR +NLNGA+IL RTIRVDHV YK+ E+ E
Sbjct: 59 DVNMPRDKETGKPKGFAFVMYEDQRSTVLAVDNLNGAKILERTIRVDHVKNYKQPREKGE 118
Query: 118 ETRQRMREERGV 129
+ REE+ +
Sbjct: 119 DGELHEREEQSL 130
>gi|392586895|gb|EIW76230.1| hypothetical protein CONPUDRAFT_111036 [Coniophora puteana
RWD-64-598 SS2]
Length = 321
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 99/146 (67%), Gaps = 11/146 (7%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E LG+S SWH +YKDSAY+YVGG+ FDLTEGD++ +F+Q GE++
Sbjct: 1 MNVVREINRINEQELKLGVS--GSWHDEYKDSAYIYVGGLHFDLTEGDVITIFSQYGEVM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
DVNL RDK TGK +GF F+ YEDQR +NLNGA +L +T+RVDHV YK+ +E+ +
Sbjct: 59 DVNLPRDKHTGKTKGFGFLMYEDQRSTILAVDNLNGANVLDKTLRVDHVKDYKQPKEKGD 118
Query: 118 ETRQRMREERGVCRAFQRGECTRGDG 143
+ R+E+ + + E T DG
Sbjct: 119 DGEWHERDEQSMN---AKPEITMEDG 141
>gi|91085985|ref|XP_972080.1| PREDICTED: similar to CG10466 CG10466-PA [Tribolium castaneum]
gi|270010180|gb|EFA06628.1| hypothetical protein TcasGA2_TC009547 [Tribolium castaneum]
Length = 266
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 96/134 (71%), Gaps = 11/134 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K ++ ++ +E G + SWH +Y+DSA+V++GG+PFDLTEGD++ +F+Q G
Sbjct: 1 MNPLTNMKNVKKLSEQELYTG--NKTSWHDQYRDSAWVFIGGLPFDLTEGDIICIFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+V++NL+RDK +GK +GF F+ YEDQR +N NG +IL RTIRVDHV+ YK ++
Sbjct: 59 EVVNINLIRDKDSGKSKGFCFLCYEDQRSTDLAVDNFNGIKILNRTIRVDHVSNYKVPKQ 118
Query: 115 ---EDEETRQRMRE 125
D ET++ E
Sbjct: 119 GKKTDAETKKLYDE 132
>gi|119479609|ref|XP_001259833.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
gi|119407987|gb|EAW17936.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
Length = 294
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 91/121 (75%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ Q +N +E + + +ASWHA Y+D+AY+Y+GG+PFDL+EGD++ +F+Q GE V
Sbjct: 1 MNAIRQTQALNKRELENAVPPEASWHADYRDTAYIYIGGLPFDLSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
V+L+RDK TGK RGFAF+ YEDQR +NL GA +LGR +RVDH A+YKK+ E+E
Sbjct: 61 HVDLIRDKETGKSRGFAFLKYEDQRSTDLAVDNLTGATVLGRVLRVDH-ARYKKRGNEEE 119
Query: 118 E 118
E
Sbjct: 120 E 120
>gi|341892274|gb|EGT48209.1| hypothetical protein CAEBREN_24057 [Caenorhabditis brenneri]
Length = 302
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 99/146 (67%), Gaps = 12/146 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDA--SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNP+T +K +N +E LG + D SWH YKDSA++Y+GG+ + L+EGD++AVF+Q
Sbjct: 1 MNPITNIKNQNRMNERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKK- 111
GE+++VNL+RDK TGK +GFAF+ Y+DQR +N NG + R IRVDHV KYK
Sbjct: 61 YGEVMNVNLIRDKDTGKSKGFAFLCYKDQRSTVLAVDNFNGITLHKRMIRVDHVEKYKVP 120
Query: 112 --KEEEDEETRQRMREERGVCRAFQR 135
KE+ DEETR R+ EE +A R
Sbjct: 121 NYKEDADEETR-RLWEEGCAPKAIMR 145
>gi|336373895|gb|EGO02233.1| hypothetical protein SERLA73DRAFT_178081 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386805|gb|EGO27951.1| hypothetical protein SERLADRAFT_462274 [Serpula lacrymans var.
lacrymans S7.9]
Length = 310
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 95/132 (71%), Gaps = 8/132 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E +LG+S SWH +YKDSAY+++GG+ F+LTEGD++A+F+Q GE++
Sbjct: 1 MNVVREISKINERELELGVS--GSWHDEYKDSAYIFIGGLNFELTEGDVIAIFSQYGEVM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
DVNL RDK TGK RGF F+ YEDQR +NLNGA++L +T+RVDHV YK+ + E
Sbjct: 59 DVNLPRDKNTGKTRGFGFLMYEDQRSTVLAVDNLNGAKVLEKTLRVDHVKNYKQPGAKGE 118
Query: 118 ETRQRMREERGV 129
+ R EE+ +
Sbjct: 119 DGEWREPEEQSL 130
>gi|395329951|gb|EJF62336.1| hypothetical protein DICSQDRAFT_104771 [Dichomitus squalens
LYAD-421 SS1]
Length = 311
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 94/132 (71%), Gaps = 8/132 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E DLGIS SWH YKDSAY++VGG+ DLTEGD++ +F+Q GEI+
Sbjct: 1 MNVVREINKINERELDLGIS--GSWHDDYKDSAYIFVGGLHRDLTEGDVITIFSQYGEIM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
D+NL RDK TGK +GFAF+ YEDQR +NLNGAQ+L RT+RVDHV YK+ + + E
Sbjct: 59 DINLPRDKETGKQKGFAFLMYEDQRSTILAVDNLNGAQVLDRTLRVDHVKNYKQPKAKGE 118
Query: 118 ETRQRMREERGV 129
+ + EE+ +
Sbjct: 119 DGEWKEAEEQSL 130
>gi|225554554|gb|EEH02851.1| RNA binding domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 276
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 89/118 (75%), Gaps = 7/118 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N +E + + +ASWHA Y+D+AY+Y+G +P DL+EGD+L +F+Q GE V
Sbjct: 1 MNAIRQVQALNKRELENVVPPEASWHADYRDTAYIYIGSLPSDLSEGDILTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
+NLVRDK TGK +GFAF+ YEDQR +NL GA ILGR IRVDH A+YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDH-ARYKRKEEE 117
>gi|260834392|ref|XP_002612195.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
gi|229297569|gb|EEN68204.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
Length = 418
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 98/135 (72%), Gaps = 11/135 (8%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V I+ ++ +E G SWH +Y DSA+V+VGG+P++LTEGD+L VF+Q GEIV
Sbjct: 5 MYNVNAIKKLSDQELSSGSG--KSWHDQYSDSAWVFVGGLPYELTEGDVLCVFSQYGEIV 62
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--KKEEE 115
++N+VRDK TGKP+GFAF+ YE+Q+ +N NG +I GRTIRVDHV+ Y+ K+ EE
Sbjct: 63 NINMVRDKKTGKPKGFAFICYENQKSTVLAVDNFNGVKIKGRTIRVDHVSNYRVPKEHEE 122
Query: 116 DEETRQRMREERGVC 130
D++ +++R+E GV
Sbjct: 123 DDDITKKIRQE-GVA 136
>gi|240277136|gb|EER40645.1| RNA binding domain-containing protein [Ajellomyces capsulatus H143]
gi|325093957|gb|EGC47267.1| RNA binding domain-containing protein [Ajellomyces capsulatus H88]
Length = 276
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 89/118 (75%), Gaps = 7/118 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N +E + + +ASWHA Y+D+AY+Y+G +P DL+EGD+L +F+Q GE V
Sbjct: 1 MNAIRQVQALNKRELENVVPPEASWHADYRDTAYIYIGSLPSDLSEGDILTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
+NLVRDK TGK +GFAF+ YEDQR +NL GA ILGR IRVDH A+YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDH-ARYKRKEEE 117
>gi|393215896|gb|EJD01387.1| hypothetical protein FOMMEDRAFT_158528 [Fomitiporia mediterranea
MF3/22]
Length = 361
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 96/132 (72%), Gaps = 7/132 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E +LG S ASWH +YKDSAY+++GG+ FDLTEGD++ +F+Q GE++
Sbjct: 1 MNVVREINKINERELELG-SSTASWHDEYKDSAYIFIGGLHFDLTEGDVITIFSQYGEVM 59
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
DVNL RDK TGK +GF F+ YEDQR +NLNGA++L RT+RVDHV YK+ + + E
Sbjct: 60 DVNLPRDKETGKTKGFGFLMYEDQRSTILAVDNLNGAKVLERTLRVDHVRNYKQPKVKGE 119
Query: 118 ETRQRMREERGV 129
+ + REE+ +
Sbjct: 120 DGEWQEREEQSL 131
>gi|389744512|gb|EIM85695.1| hypothetical protein STEHIDRAFT_169554 [Stereum hirsutum FP-91666
SS1]
Length = 349
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 101/153 (66%), Gaps = 10/153 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E DLG+S ASWH +YKDSAY+++GG+ ++LTEGD++A+F+Q GE++
Sbjct: 1 MNVVQEINKINERELDLGLSG-ASWHDEYKDSAYIFIGGLNYELTEGDVIAIFSQYGEVM 59
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
DVNL R K TGK +GF F+ YEDQR +NLNGAQ+L RT+RVDHV YK+ + + E
Sbjct: 60 DVNLPRSKETGKTKGFGFLMYEDQRSTILAVDNLNGAQVLERTLRVDHVKNYKQPKNKGE 119
Query: 118 ETRQRMREERGVCRAFQRGECTRGDGCKFSHNE 150
+ EE+ + R E DG + E
Sbjct: 120 DGEWVESEEQSLN---ARPEIIVDDGASDTSEE 149
>gi|393236038|gb|EJD43589.1| hypothetical protein AURDEDRAFT_185479 [Auricularia delicata
TFB-10046 SS5]
Length = 281
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 87/117 (74%), Gaps = 8/117 (6%)
Query: 8 KRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNL 67
K + IN +E LG+S SWH +YKDSAYVY+G +P DLTEGD++ + +Q GE++DVNL
Sbjct: 3 KEVARINERELQLGVS--GSWHDQYKDSAYVYIGNLPRDLTEGDVITIMSQYGEVMDVNL 60
Query: 68 VRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 118
RDK TGK RGF F+ YEDQR +NLNGA++L RTIRVDHV+ YK+ +E+D +
Sbjct: 61 PRDKQTGKIRGFGFLMYEDQRSTVLAVDNLNGAKVLDRTIRVDHVSDYKQPKEKDAD 117
>gi|340727255|ref|XP_003401963.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Bombus
terrestris]
Length = 139
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 99/135 (73%), Gaps = 12/135 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK I+ + +E L + SWH +Y DSA++++GG+P+DLTEGD++ VF+Q G
Sbjct: 1 MNPLTNVKNIKKLGEQE--LVSNRSISWHDQYGDSAWIFIGGLPYDLTEGDVITVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+V++NL+RDK TGK +G+ F+ YE+Q+ +NLNG +ILGR IRVDHVA YK ++
Sbjct: 59 EVVNINLIRDKNTGKQKGYGFLCYENQKSTVLAVDNLNGIKILGRIIRVDHVANYKAPKD 118
Query: 115 E---DEETRQRMREE 126
DEET+ R+R+E
Sbjct: 119 SKNVDEETK-RLRKE 132
>gi|324512768|gb|ADY45275.1| RNA-binding motif protein, X-linked 2 [Ascaris suum]
Length = 318
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 101/153 (66%), Gaps = 12/153 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDA--SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNP+T ++ I ++E +LG+ + SWH KY +SA++Y+GG+P+DL EGD++ VF+Q
Sbjct: 1 MNPITNIRNQNKITTRELELGVIGGSGKSWHDKYANSAWIYIGGLPYDLNEGDIITVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKK- 111
GEIV++NL+RD TGK RGFAF+ Y+DQR +N NG ++L R IRVDHV +YK
Sbjct: 61 YGEIVNINLIRDHKTGKSRGFAFLCYQDQRSTVLAVDNFNGIKLLKRMIRVDHVEEYKVP 120
Query: 112 --KEEEDEETRQRMREERGVCRAFQRGECTRGD 142
+E+ DEE R R+ EE + + GD
Sbjct: 121 KYREDVDEEIR-RLWEEGCAPKPINITQANDGD 152
>gi|302696573|ref|XP_003037965.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
gi|300111662|gb|EFJ03063.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
Length = 309
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 92/121 (76%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ VK I IN +E +LG+S ASWH +YKDSAY++VGG+ +LTEGD++ +F+Q GEI+
Sbjct: 1 MNVVKEINRINERELELGLSG-ASWHDEYKDSAYIFVGGLNRELTEGDVITIFSQYGEIM 59
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
D+N+ R+K TGKP+GFAFV YEDQR +NLNG+++ RT+RVDHV YK+K ++E
Sbjct: 60 DINMPREKETGKPKGFAFVMYEDQRSTVLAVDNLNGSKVAERTLRVDHVKNYKQKRTKNE 119
Query: 118 E 118
E
Sbjct: 120 E 120
>gi|154285756|ref|XP_001543673.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407314|gb|EDN02855.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 232
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 90/121 (74%), Gaps = 7/121 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
M + ++++Q +N +E + + +ASWHA Y+D+AY+Y+G +P DL+EGD+L +F+Q G
Sbjct: 1 MAGMNAIRQLQALNKRELENVVPPEASWHADYRDTAYIYIGSLPSDLSEGDILTIFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E V +NLVRDK TGK +GFAF+ YEDQR +NL GA ILGR IRVDH A+YK+KEE
Sbjct: 61 EPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDH-ARYKRKEE 119
Query: 115 E 115
E
Sbjct: 120 E 120
>gi|430812740|emb|CCJ29861.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 185
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 94/124 (75%), Gaps = 9/124 (7%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
V+ I IN+ A +G S+ SWHA+YKDSAY+Y+GG+P+DLTEGD++ +F+Q GE +D+N
Sbjct: 2 VREIARINA--AQIGASESESWHAQYKDSAYIYIGGLPYDLTEGDIICIFSQYGEPLDIN 59
Query: 67 LVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK-KKEEEDEET 119
L+RDK TGK +GF F+ YEDQR +NL+GA++LGRT++VDHV Y+ K++ D+E
Sbjct: 60 LIRDKKTGKSKGFCFLKYEDQRSTILAVDNLSGAKVLGRTLKVDHVLNYRHPKQDSDDEQ 119
Query: 120 RQRM 123
+M
Sbjct: 120 SGKM 123
>gi|358335067|dbj|GAA28104.2| RNA-binding motif protein X-linked 2 [Clonorchis sinensis]
Length = 314
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 86/117 (73%), Gaps = 7/117 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDAS-WHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MNP+T K +N +E LG + AS WH +YKDSA++++GG+ F+LTEGD++ VF+Q
Sbjct: 1 MNPITNTKNQNLMNMRELGLGYTGTASSWHRQYKDSAWIFIGGLNFELTEGDIICVFSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
GE+V++NLVRDK TG +GFAF+ YEDQR +NLNG ++ GR IRVDHV KYK
Sbjct: 61 GEVVNINLVRDKKTGISKGFAFLCYEDQRSTVLATDNLNGIKLAGRIIRVDHVEKYK 117
>gi|315049793|ref|XP_003174271.1| U2 snRNP component IST3 [Arthroderma gypseum CBS 118893]
gi|311342238|gb|EFR01441.1| U2 snRNP component IST3 [Arthroderma gypseum CBS 118893]
Length = 280
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 91/118 (77%), Gaps = 7/118 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N KE + +S +ASWHA Y+D+AYVY+GG+PFD++EGD+L +F+Q G V
Sbjct: 1 MNAIRQIEALNKKELENAVSPEASWHADYRDTAYVYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
+NLVRDK TGK RGFAF+ YEDQR +NL GA +LGR +RVDHV +YK++++E
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDE 117
>gi|348670163|gb|EGZ09985.1| hypothetical protein PHYSODRAFT_262195 [Phytophthora sojae]
Length = 228
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 89/122 (72%), Gaps = 6/122 (4%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V IQ +N +E +L + ASWH KY++SA+VYVGG+PF+L+EGD+L V +Q GE+
Sbjct: 1 MNVVAEIQRLNERELELNVPLSASWHQKYRESAWVYVGGLPFELSEGDVLCVLSQFGEVE 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
D++LVRD TGKP+GFAF+ +EDQR +NLNG ++L R +RVDHV KYK +E E
Sbjct: 61 DIHLVRDGKTGKPKGFAFLKFEDQRSTVLAVDNLNGFRLLDRVLRVDHVLKYKLPKELQE 120
Query: 118 ET 119
++
Sbjct: 121 DS 122
>gi|347839370|emb|CCD53942.1| hypothetical protein [Botryotinia fuckeliana]
Length = 325
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 94/129 (72%), Gaps = 8/129 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + G+S ASWH Y+D+AY+Y+GG+PF+L+EGD+L +F+Q GE
Sbjct: 1 MNSIRQIQELNRRELENGVSPSASWHTDYRDTAYIYIGGLPFELSEGDILTIFSQYGEPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NL+RDK TGK +GFAF+ YEDQR +NL GA I GRT++VDH +YK+KE E E
Sbjct: 61 YINLIRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGAVIAGRTLKVDHT-RYKRKEGE-E 118
Query: 118 ETRQRMREE 126
+T + EE
Sbjct: 119 DTGMDLNEE 127
>gi|242025632|ref|XP_002433228.1| U2 snRNP component IST3, putative [Pediculus humanus corporis]
gi|212518769|gb|EEB20490.1| U2 snRNP component IST3, putative [Pediculus humanus corporis]
Length = 121
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 87/116 (75%), Gaps = 8/116 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP+T VK I+ ++ E +L SWH +YKDSA+V+VGG+P+DLTEGD++ VF+Q G
Sbjct: 1 MNPMTNVKNIKKLS--EEELKGRYKTSWHEQYKDSAWVFVGGLPYDLTEGDIICVFSQFG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
E V++NLVRDK +GK RGF F+ YEDQR +NLNG +ILGRTIRVDHV YK
Sbjct: 59 EPVNINLVRDKDSGKSRGFCFLCYEDQRSTNLAVDNLNGVKILGRTIRVDHVENYK 114
>gi|296411281|ref|XP_002835362.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629140|emb|CAZ79519.1| unnamed protein product [Tuber melanosporum]
Length = 322
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 7/122 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ I+ +N +E + GI ASWH + D+AYVY+GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNNIRAIEKLNQRELEAGIPLSASWHTDWSDTAYVYIGGLPYELSEGDIITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
VNL+RDK TGK +GFAF+ YEDQR +NL GA ILGR IRVDH +YK KE E E
Sbjct: 61 HVNLIRDKDTGKSKGFAFLKYEDQRSTNLAVDNLGGATILGRIIRVDHT-RYKPKEGELE 119
Query: 118 ET 119
E
Sbjct: 120 EL 121
>gi|339247525|ref|XP_003375396.1| RNA-binding motif protein, X-linked 2 [Trichinella spiralis]
gi|316971276|gb|EFV55078.1| RNA-binding motif protein, X-linked 2 [Trichinella spiralis]
Length = 287
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 11/132 (8%)
Query: 5 TQVKRIQHINSKEADLGIS--DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
VK + IN +E LG++ D SWH KYKDSA++++GG+PF L+EGD++ VF+Q GE+
Sbjct: 22 INVKNLNKINERELHLGLAGKSDRSWHQKYKDSAWIFIGGLPFQLSEGDIICVFSQYGEV 81
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE-- 114
V +NL+RDK TGK RGF F+ YEDQR +N NG ++LGR IRVDHV Y+ +E
Sbjct: 82 VQLNLIRDKKTGKSRGFCFLCYEDQRSTVLAVDNFNGIKLLGRIIRVDHVENYRVPKERG 141
Query: 115 -EDEETRQRMRE 125
EDE T++ E
Sbjct: 142 DEDEITKKLWLE 153
>gi|296816707|ref|XP_002848690.1| U2 snRNP component IST3 [Arthroderma otae CBS 113480]
gi|238839143|gb|EEQ28805.1| U2 snRNP component IST3 [Arthroderma otae CBS 113480]
Length = 276
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 96/135 (71%), Gaps = 7/135 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N +E + +S +ASWHA Y+D+AY+Y+GG+PFD++EGD+L +F+Q G V
Sbjct: 1 MNAIRQIEALNKRELENAVSPEASWHADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NLVRDK TGK RGFAF+ YEDQR +NL GA +LGR +RVDHV +YK++++E
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDEGT 119
Query: 118 ETRQRMREERGVCRA 132
E +E G A
Sbjct: 120 EDNLANVDENGEAVA 134
>gi|256087425|ref|XP_002579870.1| rna recognition motif containing protein [Schistosoma mansoni]
Length = 279
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 85/117 (72%), Gaps = 7/117 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLG-ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MNP+T K +N KE LG +SWH +YKDSA++YVGG+ +DLTEGD++ VF+Q
Sbjct: 22 MNPITNAKNQNLMNEKELSLGHTGTVSSWHRQYKDSAWIYVGGLHYDLTEGDVICVFSQY 81
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
GEIV++NLVRDK TG +GFAFV YEDQR +NLNG ++ GR IRVDHV KY+
Sbjct: 82 GEIVNINLVRDKKTGVSKGFAFVCYEDQRSTVLATDNLNGIKLGGRIIRVDHVEKYR 138
>gi|360044342|emb|CCD81889.1| putative rna recognition motif containing protein [Schistosoma
mansoni]
Length = 258
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 85/117 (72%), Gaps = 7/117 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLG-ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MNP+T K +N KE LG +SWH +YKDSA++YVGG+ +DLTEGD++ VF+Q
Sbjct: 1 MNPITNAKNQNLMNEKELSLGHTGTVSSWHRQYKDSAWIYVGGLHYDLTEGDVICVFSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
GEIV++NLVRDK TG +GFAFV YEDQR +NLNG ++ GR IRVDHV KY+
Sbjct: 61 GEIVNINLVRDKKTGVSKGFAFVCYEDQRSTVLATDNLNGIKLGGRIIRVDHVEKYR 117
>gi|195433960|ref|XP_002064974.1| GK14925 [Drosophila willistoni]
gi|194161059|gb|EDW75960.1| GK14925 [Drosophila willistoni]
Length = 158
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 92/134 (68%), Gaps = 10/134 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ E G + SWH Y+DSA+++VGG P+ LTEGDL+ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEHELQHG-AGKKSWHDMYRDSAWIFVGGFPYTLTEGDLVCVFSQYG 59
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
E+V++NLVRD TGK +GF F+ YEDQR +NLNG QI GRT+RVDHV+ Y K+
Sbjct: 60 EVVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIQITGRTLRVDHVSDYKPPKE 119
Query: 112 KEEEDEETRQRMRE 125
E+ DEET + E
Sbjct: 120 NEKTDEETLRLYME 133
>gi|340369320|ref|XP_003383196.1| PREDICTED: hypothetical protein LOC100639137 [Amphimedon
queenslandica]
Length = 295
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 86/115 (74%), Gaps = 6/115 (5%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
+K ++ I +E +LGI ASWH +Y SAY+++GG+ +DLTEGD+L+VF+Q GEIV++N
Sbjct: 1 MKSVRDITLRELELGIEGGASWHQQYATSAYIFIGGLDYDLTEGDVLSVFSQYGEIVNIN 60
Query: 67 LVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
LVRDK TGK +GF F+ YEDQR +N NG ++ GR+IRVDHV Y++ ++E
Sbjct: 61 LVRDKKTGKSKGFCFIGYEDQRSTILAVDNFNGIKLCGRSIRVDHVQNYRRPKDE 115
>gi|443900181|dbj|GAC77508.1| predicted RNA-binding protein [Pseudozyma antarctica T-34]
Length = 318
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 91/145 (62%), Gaps = 32/145 (22%)
Query: 4 LTQVKRIQHINSKEADLGISD-DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ V+ I IN+ E D+ I + ASWH +Y+DSAY+++GG+P+DLTEGD++A+F+Q GE+
Sbjct: 1 MNVVREISRINAAELDIAIKNPSASWHEQYRDSAYIFIGGLPYDLTEGDVIAIFSQYGEV 60
Query: 63 VDVNLVRD-------------------------KGTGKPRGFAFVAYEDQR------NNL 91
VDVNL R +G GK RGF F+ YEDQR +NL
Sbjct: 61 VDVNLPRPAQQPSNSEDKQSGSASTSRDAAQPRQGKGKHRGFGFLMYEDQRSTVLAVDNL 120
Query: 92 NGAQILGRTIRVDHVAKYKKKEEED 116
NGAQ+LGRT+RVDHVA YK+ + D
Sbjct: 121 NGAQVLGRTLRVDHVASYKQPKMRD 145
>gi|357611289|gb|EHJ67406.1| RNA binding motif protein X-linked 2 [Danaus plexippus]
Length = 185
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 89/116 (76%), Gaps = 8/116 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNP+T VK + ++ +E L + +SWH +YKDSA+++VGG+P+DLTEGD++ VF+Q G
Sbjct: 1 MNPMTNVKNVLKLSERE--LTGNSKSSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
EIV++NLVRDK TG+ +GFAF+ YEDQR +NLN +ILGRTIRVDH +Y+
Sbjct: 59 EIVNINLVRDKDTGRSKGFAFICYEDQRSTILAVDNLNSIKILGRTIRVDHCEQYR 114
>gi|327293734|ref|XP_003231563.1| U2 snRNP component IST3 [Trichophyton rubrum CBS 118892]
gi|326466191|gb|EGD91644.1| U2 snRNP component IST3 [Trichophyton rubrum CBS 118892]
Length = 277
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 90/118 (76%), Gaps = 7/118 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N +E + + +ASWHA Y+D+AY+Y+GG+PFD++EGD+L +F+Q G V
Sbjct: 1 MNAIRQIEALNKRELENAVPPEASWHADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
+NLVRDK TGK RGFAF+ YEDQR +NL GA +LGR +RVDHV +YK++++E
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDE 117
>gi|225711148|gb|ACO11420.1| RNA-binding motif protein, X-linked 2 [Caligus rogercresseyi]
Length = 434
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 86/117 (73%), Gaps = 7/117 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGIS-DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MNP+T K +Q +N +E +LG++ +SWH YKDSA++++GG+ ++L+EGD++++F+Q
Sbjct: 1 MNPITNAKNLQKMNQRELELGLAGTKSSWHYDYKDSAWIFIGGLNYELSEGDIISIFSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
GE+V +NLVRD +GK +GFAF+ YEDQ +NLN +L RTIRVDHV YK
Sbjct: 61 GEVVHINLVRDGKSGKSKGFAFLCYEDQLSTILAVDNLNAITLLQRTIRVDHVQTYK 117
>gi|302505870|ref|XP_003014892.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
gi|291178463|gb|EFE34252.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
Length = 312
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 94/131 (71%), Gaps = 7/131 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N KE + + +ASWHA Y+D+AY+Y+GG+PFD++EGD+L +F+Q G V
Sbjct: 1 MNAIRQIEALNKKELENAVPPEASWHADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NLVRDK TGK RGFAF+ YEDQR +NL GA +LGR +RVDHV +YK++++E
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDEGT 119
Query: 118 ETRQRMREERG 128
E +E G
Sbjct: 120 EDNLVNVDENG 130
>gi|396499970|ref|XP_003845608.1| hypothetical protein LEMA_P009160.1 [Leptosphaeria maculans JN3]
gi|312222189|emb|CBY02129.1| hypothetical protein LEMA_P009160.1 [Leptosphaeria maculans JN3]
Length = 325
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 88/119 (73%), Gaps = 7/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ IQ +N +E + GI+ +ASWH Y+D+A++Y+GG+PF+L+EGD++ +F+Q GE V
Sbjct: 1 MNSVRNIQQLNKRELEAGINPEASWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+ L RDK TGK RGFA++ YEDQR +NL GA I+ R IRVDH A+YK +++ED
Sbjct: 61 WIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNLGGATIMDRVIRVDH-ARYKPRDDED 118
>gi|302663591|ref|XP_003023436.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
gi|291187433|gb|EFE42818.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
Length = 277
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 94/131 (71%), Gaps = 7/131 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N KE + + +ASWHA Y+D+AY+Y+GG+PFD++EGD+L +F+Q G V
Sbjct: 1 MNAIRQIEALNKKELENAVPPEASWHADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NLVRDK TGK RGFAF+ YEDQR +NL GA +LGR +RVDHV +YK++++E
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDEGT 119
Query: 118 ETRQRMREERG 128
E +E G
Sbjct: 120 EDNLVNVDENG 130
>gi|298708119|emb|CBJ30461.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 402
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 102/174 (58%), Gaps = 16/174 (9%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN + ++KRI N +E + G+S ASWH +YKDSA+V+ GG P+DLTEGD+L V +Q G
Sbjct: 1 MNVIQEIKRI---NERELEQGVSGKASWHHEYKDSAWVFAGGFPYDLTEGDILCVMSQWG 57
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY----- 109
EI D+NL R+K TGK +GF F+ YE+Q+ +N NG +LGRTIRVDH KY
Sbjct: 58 EIEDINLCREKDTGKSKGFCFIKYENQKSTILAVDNFNGIDLLGRTIRVDHKHKYSLPAE 117
Query: 110 --KKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQ 161
+K E+EDEE R ++ G G SHN + + P+
Sbjct: 118 VREKAEKEDEERVARGEAPSEKGPQWRPGVAYEGKQLATSHNFHKGVDVFAKPE 171
>gi|328698189|ref|XP_001949636.2| PREDICTED: hypothetical protein LOC100169481 [Acyrthosiphon pisum]
Length = 297
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 86/116 (74%), Gaps = 8/116 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT ++ ++ ++ E +L +SWH +YK SA+++VGG+P+DL+EGD++++F+Q G
Sbjct: 1 MNPLTNMRNVKKLS--EQELQRLPKSSWHDEYKSSAWIFVGGLPYDLSEGDIMSIFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
EI ++NLVRDK TGK +GF FV YEDQR +N NG ++LGR +RVDHV YK
Sbjct: 59 EITNLNLVRDKDTGKQKGFCFVCYEDQRSTILAVDNFNGTRVLGRILRVDHVKDYK 114
>gi|452004911|gb|EMD97367.1| hypothetical protein COCHEDRAFT_1124800 [Cochliobolus
heterostrophus C5]
Length = 322
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 87/119 (73%), Gaps = 7/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ IQ +N +E + GIS + SWH Y+D+A++Y+GG+PF+L+EGD++ +F+Q GE V
Sbjct: 1 MNSIRAIQQLNKRELEAGISPEGSWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+ L RDK TGK RGFA++ YEDQR +NL GA I+ R IRVDH A+YK K++ED
Sbjct: 61 WIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNLGGASIMDRIIRVDH-ARYKPKDDED 118
>gi|392579140|gb|EIW72267.1| hypothetical protein TREMEDRAFT_24060, partial [Tremella
mesenterica DSM 1558]
Length = 111
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 86/113 (76%), Gaps = 8/113 (7%)
Query: 5 TQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVD 64
+ +K I+ IN +E +LG+ SWH +YKDSAYV++GG+ +++TEGD++ VF+Q GE+VD
Sbjct: 1 STIKEIERINLRELELGVK--GSWHDEYKDSAYVFIGGLSYEMTEGDVIIVFSQWGEVVD 58
Query: 65 VNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKK 111
+NL RDK TGK RGF F+ YEDQR +N+NGAQILGRTIRVDH YK+
Sbjct: 59 INLPRDKETGKTRGFGFLMYEDQRSTVLAVDNMNGAQILGRTIRVDHCKSYKQ 111
>gi|156058602|ref|XP_001595224.1| hypothetical protein SS1G_03313 [Sclerotinia sclerotiorum 1980]
gi|154701100|gb|EDO00839.1| hypothetical protein SS1G_03313 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 269
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 89/120 (74%), Gaps = 7/120 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + G+ ASWH Y+D+AY+Y+GG+PF+L+EGD+L +F+Q GE
Sbjct: 1 MNSIRQIQELNRRELENGVPPSASWHTDYRDTAYIYIGGLPFELSEGDVLTIFSQYGEPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NLVRDK TGK +GFAF+ YEDQR +NL GA I GRT++VDH +YK+KE E++
Sbjct: 61 YINLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGAVIAGRTLKVDHT-RYKRKEGEED 119
>gi|308503018|ref|XP_003113693.1| hypothetical protein CRE_26315 [Caenorhabditis remanei]
gi|308263652|gb|EFP07605.1| hypothetical protein CRE_26315 [Caenorhabditis remanei]
Length = 302
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 99/146 (67%), Gaps = 12/146 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDA--SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNP+T +K +N +E +LG + D SWH YKDSA++Y+GG+ + LTEGD++AVF+Q
Sbjct: 1 MNPITNIKNQNRMNERELNLGYAGDLKKSWHQTYKDSAWIYIGGLSYALTEGDVIAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKK- 111
GE++++NL+RDK TGK +GFAF+ Y+DQR +N NG + R IRVDHV +YK
Sbjct: 61 YGEVMNINLIRDKETGKSKGFAFLCYKDQRSTVLAVDNFNGISLHKRMIRVDHVEEYKVP 120
Query: 112 --KEEEDEETRQRMREERGVCRAFQR 135
KE+ D+ET+ R+ EE + R
Sbjct: 121 KYKEDADDETK-RLWEEGCAPKPIMR 145
>gi|326469216|gb|EGD93225.1| RNA binding domain-containing protein [Trichophyton tonsurans CBS
112818]
gi|326479280|gb|EGE03290.1| U2 snRNP component IST3 [Trichophyton equinum CBS 127.97]
Length = 276
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 91/121 (75%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N +E + + +ASWHA Y+D+AY+Y+GG+PFD++EGD+L +F+Q G V
Sbjct: 1 MNAIRQIEALNKRELENAVPPEASWHADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NLVRDK TGK RGFAF+ YEDQR +NL GA +LGR +RVDHV +YK++++E
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV-RYKRRDDEGT 119
Query: 118 E 118
E
Sbjct: 120 E 120
>gi|403415035|emb|CCM01735.1| predicted protein [Fibroporia radiculosa]
Length = 352
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 91/130 (70%), Gaps = 8/130 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E DLG + SWH YKDSAY+++GG+ DLTEGD++ +F+Q GE++
Sbjct: 1 MNVVREINKINERELDLGGT--GSWHDDYKDSAYIFIGGLHSDLTEGDVITIFSQYGEVM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
DVN+ RDK TGK RGFAF+ YEDQR +NLN A +L RT+RVDHV YK+ + + E
Sbjct: 59 DVNMPRDKATGKTRGFAFLMYEDQRSTILAVDNLNSANVLERTLRVDHVKDYKQPKVKGE 118
Query: 118 ETRQRMREER 127
+ + REE+
Sbjct: 119 DGEWQEREEQ 128
>gi|353242335|emb|CCA73988.1| related to RNA-binding proteins [Piriformospora indica DSM 11827]
Length = 274
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 87/119 (73%), Gaps = 7/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E DL SWH +YKDSAY+++GG+ ++LTEGD++ VF+Q GE+V
Sbjct: 1 MNVVREINRINERELDLA-PGQGSWHDQYKDSAYIFIGGLNYELTEGDVITVFSQYGEVV 59
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
D+++ R+K TGK RGFAF+ YEDQR +NLNGA++ GRT+RVDHV YK+KE D
Sbjct: 60 DIDMPREKSTGKRRGFAFLMYEDQRSTVLAVDNLNGAELAGRTLRVDHVQNYKQKELVD 118
>gi|195580271|ref|XP_002079976.1| GD24233 [Drosophila simulans]
gi|194191985|gb|EDX05561.1| GD24233 [Drosophila simulans]
Length = 155
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 90/134 (67%), Gaps = 11/134 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ E G SWH YKDSA+++V G P+ LTEGDL+ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEHELQHG--GKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
E+V++NL+RD TGK +GF F+ YEDQR +NLNG +IL RT+RVDHVA Y K+
Sbjct: 59 EVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKE 118
Query: 112 KEEEDEETRQRMRE 125
E+ DEET + E
Sbjct: 119 NEKMDEETLRLYME 132
>gi|195345201|ref|XP_002039161.1| GM17378 [Drosophila sechellia]
gi|194134291|gb|EDW55807.1| GM17378 [Drosophila sechellia]
Length = 154
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 90/134 (67%), Gaps = 11/134 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ E G SWH YKDSA+++V G P+ LTEGDL+ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEHELQHG--GKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
E+V++NL+RD TGK +GF F+ YEDQR +NLNG +IL RT+RVDHVA Y K+
Sbjct: 59 EVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKE 118
Query: 112 KEEEDEETRQRMRE 125
E+ DEET + E
Sbjct: 119 NEKMDEETLRLYME 132
>gi|154303176|ref|XP_001551996.1| hypothetical protein BC1G_09608 [Botryotinia fuckeliana B05.10]
Length = 195
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 94/129 (72%), Gaps = 8/129 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + G+S ASWH Y+D+AY+Y+GG+PF+L+EGD+L +F+Q GE
Sbjct: 1 MNSIRQIQELNRRELENGVSPSASWHTDYRDTAYIYIGGLPFELSEGDILTIFSQYGEPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NL+RDK TGK +GFAF+ YEDQR +NL GA I GRT++VDH +YK+KE E E
Sbjct: 61 YINLIRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGAVIAGRTLKVDH-TRYKRKEGE-E 118
Query: 118 ETRQRMREE 126
+T + EE
Sbjct: 119 DTGMDLNEE 127
>gi|170090564|ref|XP_001876504.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647997|gb|EDR12240.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 116
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 87/115 (75%), Gaps = 7/115 (6%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
P + VK I IN E DLG+S ASWH +YKDSAYV+VGG+ FDLTEGD++ +F+Q GE+
Sbjct: 1 PRSVVKEINKINQAELDLGLSG-ASWHDEYKDSAYVFVGGLHFDLTEGDVITIFSQYGEV 59
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKK 111
+D+++ RDK TGK +GF F+ YEDQR +NLNGA++L RT+RVDHV YK+
Sbjct: 60 MDLHMPRDKDTGKTKGFGFLMYEDQRSTVLAVDNLNGAKVLERTLRVDHVKNYKQ 114
>gi|440634763|gb|ELR04682.1| hypothetical protein GMDG_01540 [Geomyces destructans 20631-21]
Length = 256
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 89/118 (75%), Gaps = 7/118 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N +E + G+S +ASWH+ YKD+AY+Y+GG+PF L+EGD++ +F+Q GE
Sbjct: 1 MNSIRQVQELNRRELENGVSPEASWHSDYKDTAYIYIGGLPFQLSEGDIITIFSQYGEPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
+NLVRDK TG+ +GFAF+ YEDQR +NL G +I+ R +RVDH +YKK++EE
Sbjct: 61 FINLVRDKETGESKGFAFLKYEDQRSTDLAVDNLGGTKIMNRVLRVDH-TRYKKQDEE 117
>gi|343426144|emb|CBQ69675.1| related to rna binding motif protein [Sporisorium reilianum SRZ2]
Length = 368
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 93/145 (64%), Gaps = 30/145 (20%)
Query: 4 LTQVKRIQHINSKEADLGISD-DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ V+ I IN E D+ I++ ASWH +Y DSAY+++GG+P+DLTEGD++ +F+Q GE+
Sbjct: 1 MNVVREISRINQTELDIAINNPSASWHQQYSDSAYIFIGGLPYDLTEGDVITIFSQYGEV 60
Query: 63 VDVNLVR------DKGTG-----------KP------RGFAFVAYEDQR------NNLNG 93
VDVNL R DKG G KP RGF F+ YEDQR +NLNG
Sbjct: 61 VDVNLPRANPNANDKGDGAASSSSQQQQPKPVGKGKHRGFGFLMYEDQRSTVLAVDNLNG 120
Query: 94 AQILGRTIRVDHVAKYKKKEEEDEE 118
AQ+LGRT+RVDHVA YK+ + DE+
Sbjct: 121 AQVLGRTLRVDHVASYKQPKVTDED 145
>gi|350297073|gb|EGZ78050.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 395
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 89/121 (73%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N +E + GI +ASWH Y+D+A+VY GG+P+DL+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKREIEAGIPPEASWHVDYRDTAFVYFGGLPYDLSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+ LVRDK TGK +GF ++ YEDQR +NL GA+I GR IRVDH A+YK +++ED
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDH-ARYKIRDDEDP 119
Query: 118 E 118
E
Sbjct: 120 E 120
>gi|20129641|ref|NP_610003.1| CG10466, isoform A [Drosophila melanogaster]
gi|442628478|ref|NP_001260601.1| CG10466, isoform B [Drosophila melanogaster]
gi|7298629|gb|AAF53845.1| CG10466, isoform A [Drosophila melanogaster]
gi|440213961|gb|AGB93136.1| CG10466, isoform B [Drosophila melanogaster]
Length = 154
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 90/134 (67%), Gaps = 11/134 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ E G SWH YKDSA+++V G P+ LTEGDL+ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEHELQHG--GKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
E+V++NL+RD TGK +GF F+ YEDQR +NLNG +IL RT+RVDHVA Y K+
Sbjct: 59 EVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKE 118
Query: 112 KEEEDEETRQRMRE 125
E+ DEET + E
Sbjct: 119 NEKMDEETLRLYME 132
>gi|195484576|ref|XP_002090750.1| GE13281 [Drosophila yakuba]
gi|194176851|gb|EDW90462.1| GE13281 [Drosophila yakuba]
Length = 154
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 89/134 (66%), Gaps = 11/134 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ E G SWH YKDSA+++V G P+ LTEGDL+ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEHELQNG--GKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
E+V++NL+RD TGK +GF F+ YEDQR +NLNG +IL RT+RVDHVA YK +E
Sbjct: 59 EVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKE 118
Query: 115 E---DEETRQRMRE 125
DEET + E
Sbjct: 119 NERMDEETLRLYME 132
>gi|452988237|gb|EME87992.1| hypothetical protein MYCFIDRAFT_192265 [Pseudocercospora fijiensis
CIRAD86]
Length = 310
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 86/120 (71%), Gaps = 7/120 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N E D I +ASWH Y+D+AYVY+GG+PF+L+EGD+L +F+Q G V
Sbjct: 1 MQSIRQIERLNQTELDKCIPPNASWHTDYRDTAYVYIGGLPFELSEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NLVRDK TGK RGF F+ YEDQR +NL+GA ++GR I VDH +YKKKE E E
Sbjct: 61 HINLVRDKDTGKSRGFCFLKYEDQRSCDLAVDNLSGAGVMGRVISVDH-TRYKKKEGEIE 119
>gi|85116496|ref|XP_965061.1| hypothetical protein NCU02467 [Neurospora crassa OR74A]
gi|28926863|gb|EAA35825.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567120|emb|CAE76416.1| conserved hypothetical protein [Neurospora crassa]
Length = 395
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 89/121 (73%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N +E + GI +ASWH Y+D+A+VY GG+P+DL+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKREIEAGIPPEASWHVDYRDTAFVYFGGLPYDLSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+ LVRDK TGK +GF ++ YEDQR +NL GA+I GR IRVDH A+YK +++ED
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDH-ARYKIRDDEDP 119
Query: 118 E 118
E
Sbjct: 120 E 120
>gi|268531492|ref|XP_002630872.1| Hypothetical protein CBG02589 [Caenorhabditis briggsae]
Length = 302
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 99/146 (67%), Gaps = 12/146 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDA--SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNP+T +K +N +E +LG + D SWH YKDSA++Y+GG+ + L+EGD++AVF+Q
Sbjct: 1 MNPITNIKNQNRMNERELNLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKK- 111
GE++++NL+RDK TGK +GFAF+ Y+DQR +N NG + R IRVDHV +YK
Sbjct: 61 YGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTVLAVDNFNGITLHKRMIRVDHVEEYKVP 120
Query: 112 --KEEEDEETRQRMREERGVCRAFQR 135
KE+ D+ET+ R+ EE + R
Sbjct: 121 KYKEDADDETK-RLWEEGCAPKPIMR 145
>gi|299748212|ref|XP_001837545.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
gi|298407867|gb|EAU84461.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
Length = 321
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 94/131 (71%), Gaps = 17/131 (12%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN +E +LG++ ASWH +YKDSA ++VGG+ DLTEGD++ +F+Q GEI+
Sbjct: 1 MNVVREINAINQRELELGLT--ASWHDEYKDSARIFVGGLHNDLTEGDVITIFSQYGEIM 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKE---- 113
D+N+ RDK TGKPRGFAF+ YEDQR +NLNGA++L RT+RVDHV +YK+ +
Sbjct: 59 DINMPRDKETGKPRGFAFLMYEDQRSTILAVDNLNGAKVLERTLRVDHVKQYKQPKVKNA 118
Query: 114 -----EEDEET 119
E+DEE
Sbjct: 119 DGEWVEQDEEV 129
>gi|336464966|gb|EGO53206.1| hypothetical protein NEUTE1DRAFT_150582 [Neurospora tetrasperma
FGSC 2508]
Length = 395
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 89/121 (73%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N +E + GI +ASWH Y+D+A+VY GG+P+DL+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKREIEAGIPPEASWHVDYRDTAFVYFGGLPYDLSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+ LVRDK TGK +GF ++ YEDQR +NL GA+I GR IRVDH A+YK +++ED
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDH-ARYKIRDDEDP 119
Query: 118 E 118
E
Sbjct: 120 E 120
>gi|451853478|gb|EMD66772.1| hypothetical protein COCSADRAFT_138790 [Cochliobolus sativus
ND90Pr]
Length = 318
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 86/119 (72%), Gaps = 7/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ IQ +N +E + GIS + SWH Y+D+A++Y+GG+PF+L+EGD++ +F+Q GE V
Sbjct: 1 MNSIRAIQQLNKRELEAGISPEGSWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+ L RDK TGK RGFA++ YEDQR +NL GA I+ R IRVDH +YK K++ED
Sbjct: 61 WIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNLGGASIMDRIIRVDHT-RYKPKDDED 118
>gi|225718494|gb|ACO15093.1| RNA-binding motif protein, X-linked 2 [Caligus clemensi]
Length = 359
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 92/135 (68%), Gaps = 10/135 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGIS-DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
MNP+T K + +N +E +LGI+ SWH YKDSA++++GG+ ++L+EGD++++F+Q
Sbjct: 1 MNPITNAKNLAKMNQRELELGIAGTKGSWHYDYKDSAWIFMGGLNYELSEGDIISIFSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK- 112
GE+V +NLVRD TGK +GFAF+ YEDQR ++LN +L RTIRVDHV YK
Sbjct: 61 GEVVHINLVRDGKTGKSKGFAFLCYEDQRSTILAVDDLNAITLLKRTIRVDHVQTYKLPK 120
Query: 113 --EEEDEETRQRMRE 125
E DE+ R+ E
Sbjct: 121 DLERLDEDKRKLFME 135
>gi|194879282|ref|XP_001974209.1| GG21207 [Drosophila erecta]
gi|190657396|gb|EDV54609.1| GG21207 [Drosophila erecta]
Length = 154
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 90/134 (67%), Gaps = 11/134 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ E G SWH YKDSA+++V G P+ LTEGD++ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEHELQHG--GKKSWHDMYKDSAWIFVAGFPYTLTEGDIVCVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
E+V++NL+RD TGK +GF F+ YEDQR +NLNG +IL RT+RVDHVA Y K+
Sbjct: 59 EVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKE 118
Query: 112 KEEEDEETRQRMRE 125
E+ DEET + E
Sbjct: 119 NEKMDEETLRLYME 132
>gi|111226498|ref|XP_001134546.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970613|gb|EAS66863.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 348
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 88/120 (73%), Gaps = 6/120 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ +Q+IN KE +L IS+ ASWHA Y S Y+YVGG+ +DL EGD++A+F+Q GEI
Sbjct: 1 MHRIREVQNINKKELNLNISESASWHADYSHSPYIYVGGLNYDLNEGDVIAIFSQYGEIS 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+ NLVR+K TG+ +GF FV Y+ Q+ +NLNG +LG+TI+VDHV YK+ ++ +E
Sbjct: 61 ECNLVRNKETGRSQGFCFVGYDQQKSTVLAVDNLNGINLLGKTIKVDHVKDYKRPKKNNE 120
>gi|164657279|ref|XP_001729766.1| hypothetical protein MGL_3310 [Malassezia globosa CBS 7966]
gi|159103659|gb|EDP42552.1| hypothetical protein MGL_3310 [Malassezia globosa CBS 7966]
Length = 357
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 90/141 (63%), Gaps = 26/141 (18%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ IQ IN +E +LG+ SWH +YKDSAY+YVGG+P+DLTEGD+L +F+Q GEIV
Sbjct: 1 MNSVREIQRINERELELGLHGSGSWHDQYKDSAYIYVGGLPYDLTEGDVLTIFSQYGEIV 60
Query: 64 DVNLVRD--------------------KGTGKPRGFAFVAYEDQR------NNLNGAQIL 97
+++L + K G+ RGF F+ YEDQR +NLNG+Q+L
Sbjct: 61 NIHLPKPREEPGPSDKDRRAHDPQESKKSHGRNRGFGFLMYEDQRSTVLAVDNLNGSQVL 120
Query: 98 GRTIRVDHVAKYKKKEEEDEE 118
GRT+RVDHVA +K++ D E
Sbjct: 121 GRTLRVDHVANFKQERVRDAE 141
>gi|17532167|ref|NP_495237.1| Protein C30B5.4 [Caenorhabditis elegans]
gi|351058643|emb|CCD66136.1| Protein C30B5.4 [Caenorhabditis elegans]
Length = 302
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 96/137 (70%), Gaps = 12/137 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDA--SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNP+T +K +N +E LG + D SWH YKDSA++Y+GG+ + L+EGD++AVF+Q
Sbjct: 1 MNPITNIKNQNRMNERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKK- 111
GE++++NL+RDK TGK +GFAF+ Y+DQR +N NG + R IRVDHV +YK
Sbjct: 61 YGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRMIRVDHVEEYKVP 120
Query: 112 --KEEEDEETRQRMREE 126
KE+ D+ET+ R+ EE
Sbjct: 121 KYKEDADDETK-RLWEE 136
>gi|358381284|gb|EHK18960.1| hypothetical protein TRIVIDRAFT_44275 [Trichoderma virens Gv29-8]
Length = 320
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 91/121 (75%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N KE + GIS DASWH Y+D+A+VY GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKKEIENGISPDASWHVDYRDTAFVYFGGLPYELSEGDIITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+ LVRDK TGK +GF ++ YEDQR +NL GA+I GR +RVDH A+Y+ +++ED+
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLLRVDH-ARYQARDDEDQ 119
Query: 118 E 118
+
Sbjct: 120 D 120
>gi|312379149|gb|EFR25518.1| hypothetical protein AND_09071 [Anopheles darlingi]
Length = 232
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 94/131 (71%), Gaps = 11/131 (8%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
L +K +Q ++ ++ LG + SWH +Y+DSA+++VGG+P+DLTEGD++ VF+Q GEIV
Sbjct: 64 LRNMKNVQKLSDQDLKLGGKN--SWHDQYRDSAWIFVGGLPYDLTEGDVICVFSQYGEIV 121
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KKKEE 114
++NLVRDK +GK +GF F+ YEDQR +NLNG +++G+T+RVDHV Y K+ E
Sbjct: 122 NINLVRDKTSGKSKGFCFICYEDQRSTVLAVDNLNGIKLVGKTLRVDHVQDYRPPKENEN 181
Query: 115 EDEETRQRMRE 125
D ET+Q E
Sbjct: 182 TDAETKQLYME 192
>gi|407921942|gb|EKG15076.1| hypothetical protein MPH_07759 [Macrophomina phaseolina MS6]
Length = 552
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 93/119 (78%), Gaps = 7/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++I+ +N +E + GI+ + SWHA Y+D+A+VY+GG+P++++EGD++ +F+Q GE V
Sbjct: 1 MNKIRQIKELNKRELEAGITPEGSWHADYRDTAFVYIGGLPYEVSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
VNLVRDK TGK +GFAF+ YEDQR +NL+GA+++GR I VDH +YKKKE E+
Sbjct: 61 YVNLVRDKETGKSKGFAFLKYEDQRSCDLAVDNLSGAKVMGRIISVDH-TRYKKKEGEE 118
>gi|330800733|ref|XP_003288388.1| hypothetical protein DICPUDRAFT_33993 [Dictyostelium purpureum]
gi|325081570|gb|EGC35081.1| hypothetical protein DICPUDRAFT_33993 [Dictyostelium purpureum]
Length = 121
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 88/118 (74%), Gaps = 6/118 (5%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
V+ IQ IN KE L I+D+ASWHA Y S Y+YVGG+ FDLTEGD++++F+Q GEI + N
Sbjct: 4 VREIQGINQKELSLNINDNASWHADYSHSPYIYVGGLNFDLTEGDIISIFSQYGEISECN 63
Query: 67 LVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 118
LVR+K TGK +GF F+ Y++Q+ +N NG ++LG+TI+VDHV YK+ ++ +E+
Sbjct: 64 LVRNKETGKSQGFCFIGYDNQKSTVLAVDNFNGIKVLGKTIKVDHVKDYKRPKKNNED 121
>gi|367034235|ref|XP_003666400.1| hypothetical protein MYCTH_2311045 [Myceliophthora thermophila ATCC
42464]
gi|347013672|gb|AEO61155.1| hypothetical protein MYCTH_2311045 [Myceliophthora thermophila ATCC
42464]
Length = 347
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 99/140 (70%), Gaps = 15/140 (10%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N +E + G+S +ASWHA Y+D+A++Y GG+P++LTEGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKREIENGVSPEASWHADYRDTAFIYFGGLPYELTEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED- 116
+ LVRDK TGK +GF ++ YEDQR +NL GA+I GR IRVDH A+YK +++ED
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDH-ARYKARDDEDL 119
Query: 117 -------EETRQRMREERGV 129
E+ +R R E+G+
Sbjct: 120 EQYKVGWEDMLRRERAEKGL 139
>gi|449304345|gb|EMD00352.1| hypothetical protein BAUCODRAFT_28706 [Baudoinia compniacensis UAMH
10762]
Length = 304
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 87/120 (72%), Gaps = 7/120 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N E + + +ASWH Y+D+AY+Y+GG+PF+L+EGD+L +F+Q G V
Sbjct: 1 MQSIRQVQRLNDVELEKCVPPNASWHTDYRDTAYIYIGGLPFELSEGDVLTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NLVRDK TGK +GFAF+ YEDQR +NL+GA ++GR I VDH +YKKKE E E
Sbjct: 61 HINLVRDKETGKSKGFAFLKYEDQRSCDLAVDNLSGAGVMGRVISVDHT-RYKKKEGEVE 119
>gi|332026997|gb|EGI67093.1| RNA-binding motif protein, X-linked 2 [Acromyrmex echinatior]
Length = 172
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 94/128 (73%), Gaps = 11/128 (8%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
VK I+ +N +E L + +SWH +YKDSA+++VGG+P++LTEGD++A+F+Q GE+V++N
Sbjct: 40 VKNIKKLNEQE--LQGKNKSSWHDQYKDSAWIFVGGLPYNLTEGDVIAIFSQYGEVVNIN 97
Query: 67 LVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE---DE 117
L+RDK TGK +G+ F+ YEDQR +N NG +ILGR IRVDHV+ YK ++ DE
Sbjct: 98 LIRDKDTGKQKGYGFLCYEDQRSTILAVDNFNGIKILGRVIRVDHVSNYKAPKDSKNIDE 157
Query: 118 ETRQRMRE 125
ETR +E
Sbjct: 158 ETRNLRKE 165
>gi|330928415|ref|XP_003302251.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
gi|311322479|gb|EFQ89633.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
Length = 296
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 87/119 (73%), Gaps = 7/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ IQ +N +E + GI+ + SWH Y+D+A++Y+GG+PF+L+EGD++ +F+Q GE V
Sbjct: 1 MNSIRAIQQLNKRELEAGINPEGSWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+ L RD+ TGK RGFA++ YEDQR +NL GA I+ R IRVDH A+YK K++ED
Sbjct: 61 WIKLARDRETGKSRGFAWIKYEDQRSCDLAVDNLGGANIMDRIIRVDH-ARYKPKDDED 118
>gi|71021267|ref|XP_760864.1| hypothetical protein UM04717.1 [Ustilago maydis 521]
gi|46100960|gb|EAK86193.1| hypothetical protein UM04717.1 [Ustilago maydis 521]
Length = 385
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 89/151 (58%), Gaps = 36/151 (23%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ V+ I IN E D+ I S ASWH +Y DSAY+++GG+P+DLTEGD++ +F+Q GE+
Sbjct: 1 MNVVREISRINQAELDIAIRSPSASWHQQYNDSAYIFIGGLPYDLTEGDVVTIFSQYGEV 60
Query: 63 VDVNLVRDKGT-----------------------------GKPRGFAFVAYEDQR----- 88
VDVNL R T GK RGF F+ Y+DQR
Sbjct: 61 VDVNLPRANPTSTCTHANNNDNDDRNRAASSSQQSKPLAKGKHRGFGFLMYQDQRSTVLA 120
Query: 89 -NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 118
+NLNGAQ+LGRT+RVDHVA YK+ + DE+
Sbjct: 121 VDNLNGAQVLGRTLRVDHVASYKQPKVTDEQ 151
>gi|325188529|emb|CCA23063.1| carbohydratebinding protein putative [Albugo laibachii Nc14]
Length = 899
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 94/134 (70%), Gaps = 11/134 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN + ++KRI N +E +LG+ SWH KYKDSA+VY+GG+ F+LTEGD++ V +Q G
Sbjct: 614 MNVIAEIKRI---NERELELGVPFKGSWHQKYKDSAWVYIGGLSFELTEGDVICVMSQFG 670
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EI D+NL+RD TGK +GFAF+ YE+Q+ +NLNG ++L R +RVDHV KY+ +E
Sbjct: 671 EIEDINLIRDPKTGKSKGFAFLKYENQKSTVLAVDNLNGYRLLDRLLRVDHVLKYRLPKE 730
Query: 115 EDEETRQRMREERG 128
+ ++ + E+ G
Sbjct: 731 --SQMKEELLEQGG 742
>gi|358396474|gb|EHK45855.1| hypothetical protein TRIATDRAFT_283470 [Trichoderma atroviride IMI
206040]
Length = 332
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 90/121 (74%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N KE + GIS DASWH Y+D+A+VY GG+P++L+EGD+ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKKEIENGISPDASWHVDYRDTAFVYFGGLPYELSEGDIATIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+ LVRDK TGK +GF ++ YEDQR +NL GA+I GR +RVDH A+Y+ +++ED+
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLLRVDH-ARYQARDDEDQ 119
Query: 118 E 118
+
Sbjct: 120 D 120
>gi|426192446|gb|EKV42382.1| hypothetical protein AGABI2DRAFT_195726 [Agaricus bisporus var.
bisporus H97]
Length = 298
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 87/121 (71%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN E D + ASWH YKDSAYV+VGG+ +DL+EGD++ +F+Q GEI+
Sbjct: 1 MNVVREINRINQVELD-SATGTASWHDDYKDSAYVFVGGLSYDLSEGDVITIFSQYGEIM 59
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
DVNL RDK TGK +GF FV YEDQR +NLNGA++L RT+RVDHV YK+ + ++E
Sbjct: 60 DVNLPRDKETGKTKGFGFVMYEDQRSTVLAVDNLNGAKVLERTLRVDHVRNYKQPKVKNE 119
Query: 118 E 118
+
Sbjct: 120 D 120
>gi|194760456|ref|XP_001962456.1| GF14433 [Drosophila ananassae]
gi|190616153|gb|EDV31677.1| GF14433 [Drosophila ananassae]
Length = 155
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 90/134 (67%), Gaps = 11/134 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ E G SWH Y+DSA+++V G P+ LTEGDL+ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEHELQHG--GKKSWHDMYRDSAWIFVAGFPYTLTEGDLICVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
E+V++NLVRD TGK +GF F+ YEDQR +NLNG +I+ RT+RVDHVA Y K+
Sbjct: 59 EVVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIIDRTLRVDHVADYKPPKE 118
Query: 112 KEEEDEETRQRMRE 125
E+ DEET + E
Sbjct: 119 NEKMDEETLRLYME 132
>gi|171683191|ref|XP_001906538.1| hypothetical protein [Podospora anserina S mat+]
gi|170941555|emb|CAP67207.1| unnamed protein product [Podospora anserina S mat+]
Length = 398
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 95/140 (67%), Gaps = 15/140 (10%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N KE + GI ASWH Y+D+A+VY GG+P++LTEGD++ +F+Q GE
Sbjct: 23 MNQIRAIQALNKKELENGIPPSASWHTDYRDTAFVYFGGLPYELTEGDVITIFSQYGEPT 82
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED- 116
+ LVRDK TGK +GF ++ YEDQR +NL GA+I GR IRVDH A+YK +++ED
Sbjct: 83 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIAGRLIRVDH-ARYKARDDEDL 141
Query: 117 -------EETRQRMREERGV 129
E+ +R R E+G+
Sbjct: 142 EECKVGWEDVMRRERLEKGL 161
>gi|323456906|gb|EGB12772.1| hypothetical protein AURANDRAFT_19053, partial [Aureococcus
anophagefferens]
Length = 120
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 82/114 (71%), Gaps = 6/114 (5%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
+ ++Q +N +E +LGIS +ASWHAKYKDSA+VYVGG+ DL+EGD++ V +Q GEI D N
Sbjct: 1 MAQVQKLNERELELGISAEASWHAKYKDSAWVYVGGLSTDLSEGDIICVLSQWGEIEDFN 60
Query: 67 LVRDKGTGKPRGFAFVAYEDQRNNL------NGAQILGRTIRVDHVAKYKKKEE 114
RDK TGKPRG+ + YEDQR+ + NGA +L RT+RVDH KYK E
Sbjct: 61 YPRDKKTGKPRGWCWAKYEDQRSTILAVDNGNGASLLSRTLRVDHCEKYKLPPE 114
>gi|409079599|gb|EKM79960.1| hypothetical protein AGABI1DRAFT_113205 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 298
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 87/121 (71%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ I IN E D + ASWH YKDSAY++VGG+ +DL+EGD++ +F+Q GEI+
Sbjct: 1 MNVVREINRINQVELD-SATGTASWHDDYKDSAYIFVGGLSYDLSEGDVITIFSQYGEIM 59
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
DVNL RDK TGK +GF FV YEDQR +NLNGA++L RT+RVDHV YK+ + ++E
Sbjct: 60 DVNLPRDKETGKTKGFGFVMYEDQRSTVLAVDNLNGAKVLERTLRVDHVRNYKQPKVKNE 119
Query: 118 E 118
+
Sbjct: 120 D 120
>gi|255080758|ref|XP_002503952.1| predicted protein [Micromonas sp. RCC299]
gi|226519219|gb|ACO65210.1| predicted protein [Micromonas sp. RCC299]
Length = 90
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 76/90 (84%), Gaps = 6/90 (6%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
SWHAK+KDSAY++ GG+ FDLTEGD+LAVF+Q GEIVDVNLVR++ TGK RGFAF+ YED
Sbjct: 1 SWHAKFKDSAYIFAGGLSFDLTEGDILAVFSQYGEIVDVNLVRNEETGKSRGFAFICYED 60
Query: 87 QR------NNLNGAQILGRTIRVDHVAKYK 110
QR +NLNGA++LGRTI+V+HV Y+
Sbjct: 61 QRSTVLAVDNLNGAKVLGRTIKVEHVEDYR 90
>gi|367041712|ref|XP_003651236.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
gi|346998498|gb|AEO64900.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
Length = 363
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 98/140 (70%), Gaps = 15/140 (10%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N +E + G+ +ASWHA Y+D+A++Y GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKREIENGVPPEASWHADYRDTAFIYFGGLPYELSEGDIITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED- 116
+ LVRDK TGK +GF ++ YEDQR +NL GA+I GR IRVDH A+YK +++ED
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDH-ARYKMRDDEDL 119
Query: 117 -------EETRQRMREERGV 129
E+ +R R E+G+
Sbjct: 120 EEYKVGWEDMLRRERAEKGL 139
>gi|340387228|ref|XP_003392109.1| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Amphimedon queenslandica]
Length = 123
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 86/115 (74%), Gaps = 6/115 (5%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
+K ++ I +E +LGI ASWH +Y SAY+++GG+ +DLTEGD+L+VF+Q GEIV++N
Sbjct: 1 MKSVRDITLRELELGIEGGASWHQQYATSAYIFIGGLDYDLTEGDVLSVFSQYGEIVNIN 60
Query: 67 LVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
LVRDK TGK +GF F+ YEDQR +N NG ++ GR+IRVDHV Y++ ++E
Sbjct: 61 LVRDKKTGKSKGFCFIGYEDQRSTILAVDNFNGIKVCGRSIRVDHVQNYRRPKDE 115
>gi|452822647|gb|EME29664.1| RNA-binding protein [Galdieria sulphuraria]
Length = 187
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 88/135 (65%), Gaps = 13/135 (9%)
Query: 4 LTQVKRIQHINSKEADLGISDD--ASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGE 61
+ K I N KE DLG +SWH KY S+Y++VG +PF+LTEGDLL VF Q G
Sbjct: 1 MQTTKSILQANEKELDLGHIGGYGSSWHDKYSHSSYIFVGNLPFELTEGDLLVVFEQYGH 60
Query: 62 IVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK--- 112
I DV+LVRD+ TGK +GFAF+ YEDQR +N NG +LGRT+RVDHVA YKKK
Sbjct: 61 IADVHLVRDQDTGKSKGFAFIGYEDQRSTILAVDNFNGTVLLGRTLRVDHVAHYKKKVDD 120
Query: 113 --EEEDEETRQRMRE 125
+E+EE + RE
Sbjct: 121 SVVQEEEELFDQNRE 135
>gi|239612039|gb|EEQ89026.1| U2 snRNP component IST3 [Ajellomyces dermatitidis ER-3]
Length = 258
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 77/96 (80%), Gaps = 7/96 (7%)
Query: 26 ASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE 85
+SWHA Y+D+AY+Y+G +P+DL+EGD+L +F+Q GE V +NLVRDK TGK +GFAF+ YE
Sbjct: 3 SSWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYE 62
Query: 86 DQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
DQR +NL GA +LGR IRVDHV +YK+KEEE
Sbjct: 63 DQRSTDLAVDNLGGATVLGRMIRVDHV-RYKRKEEE 97
>gi|125983973|ref|XP_001355751.1| GA10331 [Drosophila pseudoobscura pseudoobscura]
gi|54644068|gb|EAL32810.1| GA10331 [Drosophila pseudoobscura pseudoobscura]
Length = 157
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 92/134 (68%), Gaps = 10/134 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ ++ G+ SWH Y+DSA+++V G P++L+EGD++ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEQDLKQGVGK-KSWHDMYRDSAWIFVAGFPYNLSEGDIICVFSQYG 59
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
E+V++NLVRD TGK +GF F+ YEDQR +NLNG +I+ RT+RVDHV Y K+
Sbjct: 60 EVVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIMERTLRVDHVLDYKPPKE 119
Query: 112 KEEEDEETRQRMRE 125
E+ DEET + E
Sbjct: 120 NEKMDEETLRLYME 133
>gi|195156397|ref|XP_002019086.1| GL26176 [Drosophila persimilis]
gi|194115239|gb|EDW37282.1| GL26176 [Drosophila persimilis]
Length = 158
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 92/134 (68%), Gaps = 10/134 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT +K + ++ ++ G+ SWH Y+DSA+++V G P++L+EGD++ VF+Q G
Sbjct: 1 MNPLTNMKNVLKLSEQDLKQGVGK-KSWHDMYRDSAWIFVAGFPYNLSEGDIICVFSQYG 59
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY---KK 111
E+V++NLVRD TGK +GF F+ YEDQR +NLNG +I+ RT+RVDHV Y K+
Sbjct: 60 EVVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIMERTLRVDHVLDYKPPKE 119
Query: 112 KEEEDEETRQRMRE 125
E+ DEET + E
Sbjct: 120 NEKMDEETLRLYME 133
>gi|345562988|gb|EGX45994.1| hypothetical protein AOL_s00112g11 [Arthrobotrys oligospora ATCC
24927]
Length = 358
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 84/116 (72%), Gaps = 7/116 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ + +E D GI D ASWH Y+ +AYV++GG+P++L+EGD++A+F+Q GE V
Sbjct: 1 MNQIRSTLALTRQEIDNGIPDSASWHKDYRHTAYVFIGGLPYELSEGDIIAIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKE 113
++L RDK TGK RGF ++ YEDQR +NL GA +LGRTIRVDH A+YK KE
Sbjct: 61 HLHLARDKDTGKSRGFGWLKYEDQRSTNLAVDNLTGAVVLGRTIRVDH-AEYKHKE 115
>gi|195997877|ref|XP_002108807.1| hypothetical protein TRIADDRAFT_17435 [Trichoplax adhaerens]
gi|190589583|gb|EDV29605.1| hypothetical protein TRIADDRAFT_17435, partial [Trichoplax
adhaerens]
Length = 119
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 85/119 (71%), Gaps = 6/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
++ VK IQ IN E L S +WH +YK+SAYV++GG+ + LTEGD++ VF+Q GE+V
Sbjct: 1 ISNVKAIQKINETELHLTGSKSTTWHDQYKESAYVFIGGLAYGLTEGDIITVFSQYGEVV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
D+N +RDK TGK +G+ F+AYEDQR +N NG ++L RTIRVDHV Y+ ++ED
Sbjct: 61 DINYIRDKKTGKTKGYCFLAYEDQRSTTLAVDNFNGIKLLDRTIRVDHVKNYRPPKDED 119
>gi|400597950|gb|EJP65674.1| U2 snRNP component IST3 [Beauveria bassiana ARSEF 2860]
Length = 319
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 90/121 (74%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N KE + GIS +ASWH Y+D+AYVY GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKKEIENGISPEASWHTDYRDTAYVYFGGLPYELSEGDIITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+ LVRDK TGK +GF ++ YE+QR +NL GA++ GR +RVDH A+Y +++ED+
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYENQRSTDLAVDNLGGAEVGGRLLRVDH-ARYSMRDDEDQ 119
Query: 118 E 118
+
Sbjct: 120 D 120
>gi|301113430|ref|XP_002998485.1| U2 snRNP component IST3 [Phytophthora infestans T30-4]
gi|262111786|gb|EEY69838.1| U2 snRNP component IST3 [Phytophthora infestans T30-4]
Length = 233
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 82/117 (70%), Gaps = 6/117 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V IQ +N +E +L + SWH KY +SA+V+VGG+PF+L+EGD+L V +Q GEI
Sbjct: 1 MNVVAEIQRLNERELELNVPLSGSWHQKYSESAWVFVGGLPFELSEGDVLCVLSQFGEIE 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
D++LVRD TGK +GF F+ +EDQR +NLNG ++L R +RVDHV KYK +E
Sbjct: 61 DIHLVRDGKTGKSKGFVFIKFEDQRSTILAVDNLNGFKLLERVLRVDHVLKYKLPKE 117
>gi|195384987|ref|XP_002051191.1| GJ13600 [Drosophila virilis]
gi|194147648|gb|EDW63346.1| GJ13600 [Drosophila virilis]
Length = 181
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 89/130 (68%), Gaps = 8/130 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT ++ + ++ E +L SWH Y+DSA++++ G P+ L+EGD++ VF+Q G
Sbjct: 1 MNPLTNMRNVLKLS--ELELKNPSAKSWHDMYRDSAWIFIAGFPYTLSEGDIICVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIV++NLVRD TGK +GF F+ YEDQR +NLNG +I+ RT+RVDHVA YK ++
Sbjct: 59 EIVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIIDRTLRVDHVADYKPPKD 118
Query: 115 EDEETRQRMR 124
D+ + +R
Sbjct: 119 NDKLDEETLR 128
>gi|281202872|gb|EFA77074.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 349
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 80/114 (70%), Gaps = 6/114 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ IQ IN +E + G+SD ASWH Y S +VYVGG+PF++ EGD++AV +Q GEI
Sbjct: 1 MNVIREIQSINKRELERGVSDKASWHQDYAHSPWVYVGGMPFEMNEGDIIAVMSQYGEIE 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKK 111
D N+VR+K TGK +GF F+ YEDQR +NL G I+GR +RVDHV Y++
Sbjct: 61 DCNMVRNKETGKSQGFCFIKYEDQRSTNLAVDNLTGYNIMGRLLRVDHVKDYRR 114
>gi|195053126|ref|XP_001993480.1| GH13830 [Drosophila grimshawi]
gi|193900539|gb|EDV99405.1| GH13830 [Drosophila grimshawi]
Length = 180
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 89/134 (66%), Gaps = 11/134 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT ++ + ++ E +L SWH Y+DSA+++V G P+ L+EGDL+ VF+Q G
Sbjct: 1 MNPLTNMRNVLKLS--ELELKTPSAKSWHDMYRDSAWIFVAGFPYTLSEGDLVCVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK-- 112
E+V++NLVRD TGK +GF F+ YEDQR +NLNG +I+ RT+RVDHV YK
Sbjct: 59 EVVNINLVRDGKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIMERTLRVDHVLDYKPPKD 118
Query: 113 -EEEDEETRQRMRE 125
E+ DEET + E
Sbjct: 119 NEKLDEETLRLYME 132
>gi|340975515|gb|EGS22630.1| hypothetical protein CTHT_0011020 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 367
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 89/119 (74%), Gaps = 7/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N +E + GI +ASWHA Y+D+A++Y GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKREIEQGIPPEASWHADYRDTAFIYFGGLPYELSEGDIITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+ L RDK TGK +GF ++ YEDQR +NL+GA+I GR IRVDH A+YK +++ED
Sbjct: 61 FLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLSGAEIGGRLIRVDH-ARYKLRDDED 118
>gi|380025295|ref|XP_003696412.1| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Apis florea]
Length = 135
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 84/109 (77%), Gaps = 9/109 (8%)
Query: 26 ASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE 85
SWH +YK+SA++++GG+P+DLTEGD++ VF+Q GE+V++NL+RDK TGK +G+ F+ YE
Sbjct: 21 TSWHDQYKNSAWIFIGGLPYDLTEGDVITVFSQFGEVVNINLIRDKDTGKQKGYGFLCYE 80
Query: 86 DQR------NNLNGAQILGRTIRVDHVAKYKKKEEE---DEETRQRMRE 125
DQR +N NG +ILGRTIRVDHV+ YK ++ DEET++ +E
Sbjct: 81 DQRSTILAVDNFNGTKILGRTIRVDHVSNYKAPKDSKNIDEETKKLRKE 129
>gi|346321453|gb|EGX91052.1| RNA binding domain protein [Cordyceps militaris CM01]
Length = 323
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 90/121 (74%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N KE + GIS +ASWH Y+D+AYVY GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKKEIENGISPEASWHTDYRDTAYVYFGGLPYELSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+ LVRDK +GK +GF ++ YE+Q+ +NL GAQ+ GR +RVDH A+Y +++ED+
Sbjct: 61 FLKLVRDKESGKSKGFGWLKYENQKSTDLAVDNLGGAQVGGRLLRVDH-ARYSMRDDEDQ 119
Query: 118 E 118
+
Sbjct: 120 D 120
>gi|195118872|ref|XP_002003957.1| GI20215 [Drosophila mojavensis]
gi|195137572|ref|XP_002012574.1| GI11259 [Drosophila mojavensis]
gi|193906408|gb|EDW05275.1| GI11259 [Drosophila mojavensis]
gi|193914532|gb|EDW13399.1| GI20215 [Drosophila mojavensis]
Length = 183
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 89/134 (66%), Gaps = 11/134 (8%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT ++ + ++ +E L SWH Y+DSA++++ G P+ L+EGD++ VF+Q G
Sbjct: 1 MNPLTNMRNVLKLSEQE--LKNPSGKSWHDMYRDSAWIFIAGFPYTLSEGDIICVFSQYG 58
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK-- 112
E+V++NLVRD TGK +GF F+ YEDQR +NLNG +I+ RT+RVDHVA YK
Sbjct: 59 EVVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIIDRTLRVDHVADYKPPKD 118
Query: 113 -EEEDEETRQRMRE 125
E+ DEET E
Sbjct: 119 NEKLDEETLLLYME 132
>gi|402075524|gb|EJT70995.1| U2 snRNP component IST3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 378
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 87/119 (73%), Gaps = 7/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N KE + GIS +ASWH Y+D+AYVY GG+ ++LTEGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKKEIEQGISPEASWHVDYRDTAYVYFGGLSYELTEGDVVTIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+ LVRD+ TGK +GF ++ YEDQR +NL GA+I GR +RVDH A+YK E++D
Sbjct: 61 FLKLVRDRETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIAGRLVRVDH-ARYKPHEDDD 118
>gi|295666436|ref|XP_002793768.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226277421|gb|EEH32987.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 280
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 121/223 (54%), Gaps = 17/223 (7%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++Q +N KE + + +ASWHA Y+D+AY+Y+G +P+DL+EGD+L +F+Q GE V
Sbjct: 1 MNAIRQVQALNKKELENVVPPEASWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NLVRDK TGK +GFAF+ YEDQR +NL GA ILGR IRVDHV +YK+KEEE
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDHV-RYKRKEEEGL 119
Query: 118 ETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHE----KFE 173
E + A E +RGD + + +RA G D R + K E
Sbjct: 120 EDNVA-----ALASAETGEEKSRGDDGE-AGRRRRAMKRGESNTDTEDRRIRQRPLLKEE 173
Query: 174 GFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHRE 216
+ ++ + R E+ S+R H E
Sbjct: 174 EELHKLIEEHDEEDPMKEYLIQEKKEEVARALERSSLRKKHTE 216
>gi|378733759|gb|EHY60218.1| hypothetical protein HMPREF1120_08187 [Exophiala dermatitidis
NIH/UT8656]
Length = 370
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 92/132 (69%), Gaps = 7/132 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ Q +N +E + ASWHA Y+D+A++YVGG+ DLTEGD++ +F+Q G
Sbjct: 1 MNAIRQTQLLNKRELENATPPSASWHADYRDTAWIYVGGLHSDLTEGDVVTIFSQFGNPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NL+RDK TGK +GF F+ YEDQR +NL GA++LGR +RVDH +YKKK++EDE
Sbjct: 61 HLNLIRDKETGKSKGFGFLKYEDQRSCDLAVDNLGGAEVLGRLLRVDHT-RYKKKDDEDE 119
Query: 118 ETRQRMREERGV 129
+T + R E+ V
Sbjct: 120 DTYRIDRWEQEV 131
>gi|412991371|emb|CCO16216.1| RNA-binding motif protein, X-linked 2 [Bathycoccus prasinos]
Length = 336
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 118/213 (55%), Gaps = 23/213 (10%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LTQ+K Q + +E +LG+ + ASWHAKYK SAYV+VGGI +LTEGD+LA+ +Q G
Sbjct: 63 MNVLTQIKNQQDASLREIELGLPESASWHAKYKHSAYVFVGGIHSELTEGDVLAILSQYG 122
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIVDV + RD+ TGK +GFAFV Y DQR +NLNG+++LGR +RVDH Y
Sbjct: 123 EIVDVFVPRDEKTGKSKGFAFVCYLDQRSTIIAVDNLNGSKVLGRILRVDHCEDY----- 177
Query: 115 EDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG 174
R+REE + + +C+ G F E+ G P++ + K E
Sbjct: 178 -------RLREEFN--KKILKWKCSLCGGDNFEGRERCFKCNGNAPKEA---YVEVKREE 225
Query: 175 FSWGKNDSSSRATGSGRVALEGNPNQSDRREEK 207
+ SSS + +GN Q EEK
Sbjct: 226 EEGASSSSSSSEDDDEKEEKDGNEKQRGEEEEK 258
>gi|398412159|ref|XP_003857408.1| hypothetical protein MYCGRDRAFT_107156 [Zymoseptoria tritici
IPO323]
gi|339477293|gb|EGP92384.1| hypothetical protein MYCGRDRAFT_107156 [Zymoseptoria tritici
IPO323]
Length = 329
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 86/120 (71%), Gaps = 7/120 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N E + I +ASWH Y+D+AY+Y+GG+PF+L+EGD+L +F+Q G V
Sbjct: 1 MQSIRQIERLNQTELEKVIPSNASWHTDYRDTAYLYIGGLPFELSEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NLVRDK TGK RGF F+ YEDQR +NL+GA ++G+ + VDH +YKKKE E E
Sbjct: 61 HINLVRDKETGKSRGFCFLKYEDQRSCDLAVDNLSGAGVMGKVLSVDH-TRYKKKEGEVE 119
>gi|388857171|emb|CCF49184.1| related to rna binding motif protein [Ustilago hordei]
Length = 321
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 86/143 (60%), Gaps = 35/143 (24%)
Query: 4 LTQVKRIQHINSKEADLGISD-DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ V+ I IN E D+ + + ASWHA+Y DSAY+++GG+P+DLTEGD++ +F+Q GE+
Sbjct: 1 MNVVREITRINQAELDIALGNPSASWHAQYSDSAYIFIGGLPYDLTEGDVITIFSQYGEV 60
Query: 63 VDVNLVRDK----------------------------GTGKPRGFAFVAYEDQR------ 88
VDVNL R + G GK RGF F+ Y+DQR
Sbjct: 61 VDVNLPRAQSQPSRTQASGSNEEPKPEPEPEPEPKPVGKGKHRGFGFLMYQDQRSTVLAV 120
Query: 89 NNLNGAQILGRTIRVDHVAKYKK 111
+NLNGA +LGRT+RVDHVA YK+
Sbjct: 121 DNLNGAVVLGRTLRVDHVAGYKQ 143
>gi|313221560|emb|CBY36055.1| unnamed protein product [Oikopleura dioica]
gi|313239684|emb|CBY14576.1| unnamed protein product [Oikopleura dioica]
Length = 236
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 81/116 (69%), Gaps = 6/116 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN LT+++ I +N KE G + + SWH +YKDSA++Y G + + LTEGD+LAVF+Q G
Sbjct: 1 MNILTKIRLINELNYKELRHGTNPENSWHMQYKDSAWIYAGNLSYKLTEGDILAVFSQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
EI +VNLVRD+ TG +GF F+ YEDQR +N NG ++ R +RVDHV +YK
Sbjct: 61 EISNVNLVRDRETGTSKGFCFICYEDQRSTILAVDNFNGMELCNRPVRVDHVEEYK 116
>gi|320589446|gb|EFX01907.1| u2 snrnp component ist3 [Grosmannia clavigera kw1407]
Length = 353
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 86/119 (72%), Gaps = 7/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++++IQ +N KE + GIS ASWH Y+D+A+VY GG+PF+L+EGD++ +F+Q GE V
Sbjct: 1 MNKIRQIQELNKKELEQGISPQASWHTDYRDTAFVYFGGLPFELSEGDVITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+ L RD+ TGK +GF ++ YEDQR +NL GA I GR I VDH A+YK +++ED
Sbjct: 61 FLKLARDRETGKSKGFGWLKYEDQRSTDLAVDNLGGASISGRLIHVDH-ARYKARDDED 118
>gi|397620275|gb|EJK65638.1| hypothetical protein THAOC_13484 [Thalassiosira oceanica]
Length = 227
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 78/114 (68%), Gaps = 7/114 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDA-SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ V I IN E + G++ A SWH KY+DSA+VY G +P LTEGD+L + +Q GEI
Sbjct: 1 MNVVNEITRINDLELEQGLTHTAGSWHGKYRDSAWVYAGNLPHALTEGDVLCILSQYGEI 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
DVNLVRD TGK RGFAFV YED R +N GAQ+LGRT+RVDHV +YK
Sbjct: 61 EDVNLVRDDDTGKSRGFAFVKYEDARSCVLAVDNFTGAQVLGRTLRVDHVERYK 114
>gi|453088501|gb|EMF16541.1| RRM_1-domain-containing protein, partial [Mycosphaerella populorum
SO2202]
Length = 114
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 83/115 (72%), Gaps = 7/115 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N E D I +ASWH Y+D+AY+Y+GG+PF+L+EGD+L +F+Q G V
Sbjct: 1 MQSIRQIERLNQTELDKCIPSNASWHTDYRDTAYLYIGGLPFELSEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK 112
+NLVRDK TGK RGF F+ YEDQR +NL+GA ++GR I VDH +YKKK
Sbjct: 61 HINLVRDKDTGKSRGFCFLKYEDQRSCDLAVDNLSGAGVMGRVISVDH-TRYKKK 114
>gi|449549543|gb|EMD40508.1| hypothetical protein CERSUDRAFT_44938, partial [Ceriporiopsis
subvermispora B]
Length = 151
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 8/111 (7%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
V+ I IN +E DLG++ ASWH YKDSAY++VGG+ +LTEGD++ +F+Q GE++DVN
Sbjct: 3 VREINKINERELDLGLT--ASWHDDYKDSAYIFVGGLNPELTEGDVITIFSQYGEVMDVN 60
Query: 67 LVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKK 111
L R K TGK +GF F+ YEDQR +NLNGA++L RT+RVDHV YK+
Sbjct: 61 LPRHKDTGKTKGFGFLMYEDQRSTVLAVDNLNGAKVLERTLRVDHVKNYKQ 111
>gi|322697734|gb|EFY89510.1| U2 snRNP component IST3 [Metarhizium acridum CQMa 102]
Length = 308
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 86/121 (71%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ IQ +N +E + GI+ + SWH Y+D+A++Y GG+P+DLTEGD++ +F+Q GE V
Sbjct: 1 MNKIRAIQELNRREIENGITPEGSWHVDYRDTAFIYFGGLPYDLTEGDIITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+ L RDK TGK +GF ++ YEDQR +NL GA I GR I VDH A+YK +++ED
Sbjct: 61 FLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLGGADIGGRMISVDH-ARYKARDDEDP 119
Query: 118 E 118
E
Sbjct: 120 E 120
>gi|320162903|gb|EFW39802.1| RNA-binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 293
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 85/124 (68%), Gaps = 10/124 (8%)
Query: 4 LTQVKRIQHINSKEADLGI----SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
+ V++IQ +N +E G+ S ASWH +++ SAYV+VGG P++LTEGDLL V +Q
Sbjct: 1 MNTVRQIQRVNERELQRGLTASQSSSASWHDEFRGSAYVHVGGFPYELTEGDLLCVMSQY 60
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKE 113
GEIVD+NLVRDK T K G+ F+AYEDQR +NLNG +I RTIRVDHV Y+ +
Sbjct: 61 GEIVDINLVRDKKTNKSLGYCFIAYEDQRSTVLAVDNLNGIKIGNRTIRVDHVKDYRLTK 120
Query: 114 EEDE 117
+ E
Sbjct: 121 DLQE 124
>gi|302420537|ref|XP_003008099.1| U2 snRNP component IST3 [Verticillium albo-atrum VaMs.102]
gi|261353750|gb|EEY16178.1| U2 snRNP component IST3 [Verticillium albo-atrum VaMs.102]
Length = 333
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 86/119 (72%), Gaps = 7/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q+K IQ +N +E + GIS +ASWH Y+D+A++Y GG+P++++EGD++ +F+Q GE V
Sbjct: 1 MNQIKAIQALNKQEIENGISPEASWHVDYRDTAFIYFGGLPYEMSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+ L RDK TGK +GF ++ YEDQR +NL GA I R +RVDH A+YK +++ED
Sbjct: 61 WLKLARDKETGKAKGFGWLKYEDQRSTDLAVDNLGGATIGSRMVRVDH-ARYKFRDDED 118
>gi|116193997|ref|XP_001222811.1| hypothetical protein CHGG_06716 [Chaetomium globosum CBS 148.51]
gi|88182629|gb|EAQ90097.1| hypothetical protein CHGG_06716 [Chaetomium globosum CBS 148.51]
Length = 334
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 88/121 (72%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q++ IQ +N +E + G+ +ASWH Y+D+A+VY GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNQIRAIQALNKREIENGVPPEASWHTDYRDTAFVYFGGLPYELSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+ L RDK TG+ +GF ++ YEDQR +NL GA+I GR +RVDH A+YK +++ED
Sbjct: 61 FLKLARDKETGRSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRMVRVDH-ARYKLRDDEDP 119
Query: 118 E 118
E
Sbjct: 120 E 120
>gi|427781965|gb|JAA56434.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 109
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 75/102 (73%), Gaps = 6/102 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK I +N E LG+++ SWH KYKDSA++++GG+ + LTEGD++ VF+Q G
Sbjct: 1 MNPLTNVKNITKLNETELKLGVTEKTSWHKKYKDSAWIFIGGLDYQLTEGDVICVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NLNGAQI 96
E+V++NL+RDK TGK +G+ F+ YEDQR+ NLNG +
Sbjct: 61 EVVNINLIRDKKTGKSKGYCFLCYEDQRSTVLSVDNLNGISV 102
>gi|452848098|gb|EME50030.1| hypothetical protein DOTSEDRAFT_122130, partial [Dothistroma
septosporum NZE10]
Length = 114
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 83/115 (72%), Gaps = 7/115 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N E D + +ASWH Y+D+AYVY+GG+PF+L+EGD+L +F+Q G V
Sbjct: 1 MQSIRQIERLNQTELDKCVPLNASWHTDYRDTAYVYIGGLPFELSEGDILTIFSQYGNPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK 112
+NLVRDK TGK +GF F+ YEDQR +NL+GA ++GR + VDH +YKKK
Sbjct: 61 HINLVRDKETGKSKGFCFIKYEDQRSCDLAVDNLSGAGVMGRVMSVDH-TRYKKK 114
>gi|241605858|ref|XP_002406132.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215502625|gb|EEC12119.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 114
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 75/100 (75%), Gaps = 6/100 (6%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VK I +N E LGI++ SWH KYKDSA+++VGG+ ++LTEGD++ VF+Q G
Sbjct: 1 MNPLTNVKNITKLNETELKLGINEKTSWHKKYKDSAWIFVGGLDYELTEGDIICVFSQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGA 94
EIV++NL+RDK TGK +G+ F+ +EDQR +NLNG
Sbjct: 61 EIVNINLIRDKKTGKSKGYCFLCFEDQRSTVLSVDNLNGI 100
>gi|328876029|gb|EGG24393.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 280
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 79/114 (69%), Gaps = 6/114 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ IQ IN E G S+ +SWH Y S +++ GG+PFDL EGD++ VF+Q GE+
Sbjct: 1 MNVVREIQRINRNEMTSGASETSSWHEDYSHSCWIFAGGMPFDLNEGDVVTVFSQYGEVD 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKK 111
+ +LVR+K TGK +GFAF+ Y DQ+ +NLNG +ILGRTIRVDHV Y+K
Sbjct: 61 EYDLVRNKETGKSQGFAFIKYMDQKSTILAVDNLNGVKILGRTIRVDHVKDYRK 114
>gi|357490655|ref|XP_003615615.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355516950|gb|AES98573.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 161
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 63/71 (88%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT VKRIQ INS+EA L IS+DASWH KYKDSAYV+VGGIPFD TEGD++AVFAQ G
Sbjct: 1 MNPLTLVKRIQLINSREAALNISEDASWHTKYKDSAYVFVGGIPFDFTEGDIIAVFAQYG 60
Query: 61 EIVDVNLVRDK 71
E+VDVNLVRD
Sbjct: 61 EVVDVNLVRDA 71
>gi|19113271|ref|NP_596479.1| RNA-binding protein Cwf29 [Schizosaccharomyces pombe 972h-]
gi|74676178|sp|O94290.1|IST3_SCHPO RecName: Full=U2 snRNP component ist3; AltName: Full=Complexed with
cdc5 protein 29; AltName: Full=RNA-binding protein cwf29
gi|3850101|emb|CAA21890.1| RNA-binding protein Cwf29 [Schizosaccharomyces pombe]
Length = 217
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 82/120 (68%), Gaps = 8/120 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I+ +N +E D S +SWH Y DSAY+Y+G + FDL E D+L VF++ GE V
Sbjct: 1 MNSIRQIERLNEQELDKPFS--SSWHQDYSDSAYIYIGNLDFDLNEDDILCVFSEFGEPV 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
D+NLVRDK TGK +GFAF+ YEDQR +N+ ++L R +RVDHVA YK ++E E
Sbjct: 59 DINLVRDKETGKSKGFAFLKYEDQRSTVLAVDNMTNVKLLDRLVRVDHVASYKVPQKEKE 118
>gi|403358378|gb|EJY78834.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 403
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 6/113 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++K ++ + +E D ASWH +YKDSAY+Y+GG+ + + EGD+ VF+Q GE+V
Sbjct: 1 MNRIKNVERLTQRELDTLTPYHASWHYEYKDSAYIYIGGLNYRMNEGDIAIVFSQFGEVV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
D L RD+ TGK +GFAF+AYEDQ+ +NLNG + GR I VDHV +YK
Sbjct: 61 DCRLARDQKTGKSKGFAFLAYEDQKSTVLAVDNLNGIDLCGRLISVDHVMQYK 113
>gi|86196844|gb|EAQ71482.1| hypothetical protein MGCH7_ch7g889 [Magnaporthe oryzae 70-15]
Length = 290
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 86/121 (71%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q+K IQ +N KE + GIS +ASWH Y+D+A+VY GG+ L+EGD++ +F+Q GE V
Sbjct: 1 MNQIKAIQALNKKEIEQGISPEASWHVDYRDTAFVYFGGLDDTLSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+ LVRDK TGK RGF ++ YEDQR +NL GA I R +RVDH A+YK +++ED+
Sbjct: 61 FLKLVRDKETGKSRGFGWLKYEDQRSTDLAVDNLGGAVIKDRMMRVDH-ARYKGRDDEDD 119
Query: 118 E 118
+
Sbjct: 120 D 120
>gi|389645911|ref|XP_003720587.1| U2 snRNP component IST3 [Magnaporthe oryzae 70-15]
gi|351637979|gb|EHA45844.1| U2 snRNP component IST3 [Magnaporthe oryzae 70-15]
gi|440472117|gb|ELQ41000.1| U2 snRNP component IST3 [Magnaporthe oryzae Y34]
gi|440483610|gb|ELQ63975.1| U2 snRNP component IST3 [Magnaporthe oryzae P131]
Length = 330
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 86/121 (71%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ Q+K IQ +N KE + GIS +ASWH Y+D+A+VY GG+ L+EGD++ +F+Q GE V
Sbjct: 1 MNQIKAIQALNKKEIEQGISPEASWHVDYRDTAFVYFGGLDDTLSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+ LVRDK TGK RGF ++ YEDQR +NL GA I R +RVDH A+YK +++ED+
Sbjct: 61 FLKLVRDKETGKSRGFGWLKYEDQRSTDLAVDNLGGAVIKDRMMRVDH-ARYKGRDDEDD 119
Query: 118 E 118
+
Sbjct: 120 D 120
>gi|448082856|ref|XP_004195240.1| Piso0_005787 [Millerozyma farinosa CBS 7064]
gi|359376662|emb|CCE87244.1| Piso0_005787 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 77/114 (67%), Gaps = 6/114 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +K+I IN KE + ISD ASWHA +KDS+Y+++G +P +L E D++ +F+Q G
Sbjct: 1 MNAIKKINEINYKELENNISDSASWHADFKDSSYIFIGFLPQELKEDDVIKIFSQYGIPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKK 111
+NLV+DK TGKPRGF ++ YED R +NLNG QI + I+VDHV Y K
Sbjct: 61 HINLVKDKETGKPRGFCYLKYEDYRSCILAVDNLNGVQIFNKRIKVDHVHYYLK 114
>gi|408395588|gb|EKJ74767.1| hypothetical protein FPSE_05102 [Fusarium pseudograminearum CS3096]
Length = 319
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 85/119 (71%), Gaps = 7/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ IQ +N KE + GI+ + SWH Y+D+AYVY GG+P++L+EGD++ +F+Q GE V
Sbjct: 1 MNKIRAIQALNKKEIENGITPEGSWHTDYRDTAYVYFGGLPYELSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+ L RDK TGK +GF ++ YEDQR +NL GA + GR + VDH A+YK +++ED
Sbjct: 61 WLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLGGADMGGRLVSVDH-ARYKMRDDED 118
>gi|365981695|ref|XP_003667681.1| hypothetical protein NDAI_0A02810 [Naumovozyma dairenensis CBS 421]
gi|343766447|emb|CCD22438.1| hypothetical protein NDAI_0A02810 [Naumovozyma dairenensis CBS 421]
Length = 169
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 79/109 (72%), Gaps = 7/109 (6%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q+K IQ IN KE D+GI S++ SWH +YKD AY+Y+GG+P DLTE D+L VF+Q G
Sbjct: 1 MNQIKSIQRINQKELDVGILSEEQSWHHEYKDQAYIYIGGLPRDLTEADILTVFSQFGIP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDH 105
VD+ LVRD +G+ +GFA++ YEDQR +NLNG ++ G TI VDH
Sbjct: 61 VDIFLVRDHQSGESKGFAYLKYEDQRSTILAVDNLNGTKLNGNTIHVDH 109
>gi|319433481|gb|ADV57656.1| RNA-binding protein [Bursaphelenchus xylophilus]
gi|319433483|gb|ADV57657.1| RNA-binding protein [Bursaphelenchus xylophilus]
Length = 316
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 89/138 (64%), Gaps = 8/138 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDAS--WHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MN T+++ +N KE LG + D S WH+ YK+SA+++VGG+ + LTEGDLLAVF+Q
Sbjct: 1 MNHKTKIRLQNELNEKELSLGYAGDTSKSWHSVYKESAWIHVGGLDYGLTEGDLLAVFSQ 60
Query: 59 CGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK 112
GEI +VN++RD T K +GFAF+ Y+DQR +N NG +I GR I+VDHV +K
Sbjct: 61 YGEICNVNIIRDYKTLKSKGFAFICYQDQRSTVLAVDNFNGIKIAGREIKVDHVESFKPP 120
Query: 113 EEEDEETRQRMREERGVC 130
+ ++ M+ R C
Sbjct: 121 KYKENVPEALMKIWREGC 138
>gi|422295618|gb|EKU22917.1| u2 snrnp component ist3 [Nannochloropsis gaditana CCMP526]
Length = 121
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 84/120 (70%), Gaps = 7/120 (5%)
Query: 4 LTQVKRIQHINSKEADLGISD-DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ V+ IQ +N KE G + + SWH +YKDSA+V+VG +P L+EGD+L V +Q GEI
Sbjct: 1 MNVVREIQRLNEKELQRGTAGMEGSWHGQYKDSAWVFVGSLPSQLSEGDVLCVMSQWGEI 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
D++LVRDKGTGK +GFAF+ YEDQR +N+NG ++L RT+RVDH KY +E +
Sbjct: 61 EDLHLVRDKGTGKSKGFAFLKYEDQRSTILAVDNMNGIKLLERTLRVDHKEKYSLPKETE 120
>gi|169600369|ref|XP_001793607.1| hypothetical protein SNOG_03018 [Phaeosphaeria nodorum SN15]
gi|160705424|gb|EAT89749.2| hypothetical protein SNOG_03018 [Phaeosphaeria nodorum SN15]
Length = 373
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 83/119 (69%), Gaps = 7/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ V+ IQ +N +E + G+ + SWH Y+D+A++ +GG+PF+L+EGD++ +F+Q GE V
Sbjct: 1 MNSVRAIQQLNKRELEAGVGTEGSWHTDYRDTAFINIGGLPFELSEGDIITIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
V L RDK TGK RGFA++ YEDQR +NL G+ I+ R IRVDH A+YK + ED
Sbjct: 61 WVKLARDKETGKSRGFAWIKYEDQRSCDLAVDNLGGSTIMDRVIRVDH-ARYKPMDGED 118
>gi|310797734|gb|EFQ32627.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 331
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 82/119 (68%), Gaps = 7/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ IQ +N KE + GIS + SWH Y+D+AY+Y GG+P++++EGD++ VF+Q GE V
Sbjct: 1 MNKIRAIQELNRKEIENGISPEGSWHVDYRDTAYIYFGGLPYEMSEGDVITVFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+ L RDK TGK +GF ++ YEDQR +NL GA I R I VDH A+YK E ED
Sbjct: 61 WLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLGGATIKDRLISVDH-ARYKFHENED 118
>gi|195137574|ref|XP_002012575.1| GI11260 [Drosophila mojavensis]
gi|193906409|gb|EDW05276.1| GI11260 [Drosophila mojavensis]
Length = 177
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 76/108 (70%), Gaps = 9/108 (8%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
SWH Y+DSA++++ G P+ L+EGD++ VF+Q GE+V++NLVRD TGK +GF F+ YED
Sbjct: 19 SWHDMYRDSAWIFIAGFPYTLSEGDIICVFSQYGEVVNINLVRDSKTGKSKGFCFLCYED 78
Query: 87 QR------NNLNGAQILGRTIRVDHVAKYKKK---EEEDEETRQRMRE 125
QR +NLNG +I+ RT+RVDHVA YK E+ DEET E
Sbjct: 79 QRSTVLAVDNLNGIKIIDRTLRVDHVADYKPPKDNEKLDEETLLLYME 126
>gi|224009920|ref|XP_002293918.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970590|gb|EED88927.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 140
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 89/134 (66%), Gaps = 9/134 (6%)
Query: 4 LTQVKRIQHINSKEADLGIS-DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ V IQ IN E + G++ ASWH KYKDSA+++ G +P +LTEGD+L + +Q GEI
Sbjct: 1 MNVVNEIQRINDLELEKGLTHTSASWHDKYKDSAWIHAGNLPLNLTEGDVLCILSQYGEI 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--KKEE 114
D++LVRDK +GK +GFAFV YED R +NL G+ +LGRT+RVDHV Y+ K +
Sbjct: 61 DDIHLVRDKDSGKSKGFAFVKYEDARSCVLAVDNLCGSMVLGRTLRVDHVENYRLPKHIQ 120
Query: 115 EDEETRQRMREERG 128
E E+ + +E G
Sbjct: 121 EKEDGLNKEGDEEG 134
>gi|242790685|ref|XP_002481602.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218718190|gb|EED17610.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 285
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 118/227 (51%), Gaps = 33/227 (14%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++IQ +N +E + + +ASWHA Y+D+AY+Y+GG+PFDL+EGD++ +F+Q GE V
Sbjct: 1 MNSIRQIQALNKRELENAVPPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
VNLVRDK TGK +GFAF+ YEDQR +NL GA ++GR +RVDH +YK+K+ E+E
Sbjct: 61 HVNLVRDKDTGKSKGFAFLKYEDQRSTDLAVDNLGGATVMGRVLRVDH-TRYKRKDGEEE 119
Query: 118 ETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGP-----QDRSSRWGHEKF 172
E V R + ++++ GG ++ S E+
Sbjct: 120 --------EDNVATIMGSTTGHRDEDTDTERRDRKSWRKGGDTDENDVEEPSRPMLKEEI 171
Query: 173 EGFSWGKNDSSSRATGSGRV---------ALEG----NPNQSDRREE 206
E ++ + ALE S RR++
Sbjct: 172 ELVELMRDHDDEDPMKEYLIQEKKEEVARALENLKSREKKSSSRRKD 218
>gi|294942558|ref|XP_002783584.1| RNA-binding motif protein, X-linked, putative [Perkinsus marinus
ATCC 50983]
gi|239896081|gb|EER15380.1| RNA-binding motif protein, X-linked, putative [Perkinsus marinus
ATCC 50983]
Length = 191
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 82/121 (67%), Gaps = 6/121 (4%)
Query: 6 QVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
++ RI+ ++ +E + ASWH KY DSAY+Y+G + LTEGDL+ VF+Q GEI+DV
Sbjct: 9 EIDRIRQLSERELKDQTPEHASWHEKYHDSAYLYIGNLDRGLTEGDLITVFSQFGEILDV 68
Query: 66 NLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDEET 119
NLVRDK TGK +GF F+AYEDQR +N+ G ++GR ++VDHV Y+ ED E
Sbjct: 69 NLVRDKETGKSKGFGFLAYEDQRSTRYAIDNMIGFNLVGRPLKVDHVNSYRAPIVEDPEG 128
Query: 120 R 120
R
Sbjct: 129 R 129
>gi|380479686|emb|CCF42869.1| U2 snRNP component IST3 [Colletotrichum higginsianum]
Length = 333
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 84/119 (70%), Gaps = 7/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ IQ +N KE + GIS + SWH Y+D+AY+Y GG+P++++EGD++ VF+Q GE V
Sbjct: 1 MNKIRAIQALNKKEIENGISPEGSWHVDYRDTAYIYFGGLPYEMSEGDVITVFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+ L RDK TGK +GF ++ YEDQR +NL GA I R I VDH A+YK +++ED
Sbjct: 61 WLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLGGATIKDRLISVDH-ARYKFRDDED 118
>gi|146422609|ref|XP_001487240.1| hypothetical protein PGUG_00617 [Meyerozyma guilliermondii ATCC
6260]
gi|146388361|gb|EDK36519.1| hypothetical protein PGUG_00617 [Meyerozyma guilliermondii ATCC
6260]
Length = 214
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 83/121 (68%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I IN +E + +SD ASWHA Y+D++Y+YVG +P +L E D++A+F+Q G
Sbjct: 1 MAAIQKIIDINKRELEANVSDSASWHADYRDTSYIYVGYLPLELEEKDIVAIFSQYGNPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+NLVRD+ TGK RGF ++ YED R +N NG Q+L + I+VDHV YK +E ++E
Sbjct: 61 HINLVRDRETGKSRGFCYLKYEDVRSCVLAIDNFNGVQLLNKRIKVDHVY-YKLREGQNE 119
Query: 118 E 118
+
Sbjct: 120 D 120
>gi|294656886|ref|XP_459205.2| DEHA2D16544p [Debaryomyces hansenii CBS767]
gi|199431815|emb|CAG87376.2| DEHA2D16544p [Debaryomyces hansenii CBS767]
Length = 265
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 76/114 (66%), Gaps = 6/114 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I IN KE + +SD ASWHA YKD++Y+Y+G +PFDL E D++ +F+Q G
Sbjct: 1 MNAIQKINKINQKELENNVSDSASWHADYKDTSYIYIGFLPFDLNEMDIVKIFSQYGIPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKK 111
+NL++DK TGK RGF ++ YED + +N NG Q+ + I+VDHV Y K
Sbjct: 61 HINLIKDKETGKSRGFCYLKYEDYKSCVLAIDNFNGTQLRDKKIKVDHVYYYLK 114
>gi|358060582|dbj|GAA93701.1| hypothetical protein E5Q_00346 [Mixia osmundae IAM 14324]
Length = 645
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 90/132 (68%), Gaps = 9/132 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
++ V +I+ IN+++ +LG SWH +Y++SAY+Y+GG+ LTEGD++ + +Q GE+V
Sbjct: 1 MSLVNQIRTINARQLELG---GGSWHDEYRESAYIYMGGLDEALTEGDVITIASQYGEVV 57
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRN------NLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+V + RDK T KPRGFAFV YEDQR+ NL G+++L RT+RVDHV +K E + E
Sbjct: 58 NVEMPRDKTTHKPRGFAFVMYEDQRSTVLAVDNLTGSKLLERTLRVDHVKNFKHLEHDQE 117
Query: 118 ETRQRMREERGV 129
+ R E+ +
Sbjct: 118 TGLMKERSEQSL 129
>gi|358060581|dbj|GAA93700.1| hypothetical protein E5Q_00345 [Mixia osmundae IAM 14324]
Length = 641
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 90/132 (68%), Gaps = 9/132 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
++ V +I+ IN+++ +LG SWH +Y++SAY+Y+GG+ LTEGD++ + +Q GE+V
Sbjct: 1 MSLVNQIRTINARQLELG---GGSWHDEYRESAYIYMGGLDEALTEGDVITIASQYGEVV 57
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRN------NLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+V + RDK T KPRGFAFV YEDQR+ NL G+++L RT+RVDHV +K E + E
Sbjct: 58 NVEMPRDKTTHKPRGFAFVMYEDQRSTVLAVDNLTGSKLLERTLRVDHVKNFKHLEHDQE 117
Query: 118 ETRQRMREERGV 129
+ R E+ +
Sbjct: 118 TGLMKERSEQSL 129
>gi|448087450|ref|XP_004196332.1| Piso0_005787 [Millerozyma farinosa CBS 7064]
gi|359377754|emb|CCE86137.1| Piso0_005787 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 76/114 (66%), Gaps = 6/114 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +K+I IN KE + ISD ASWHA ++DS+Y+++G +P +L E D++ +F+Q G
Sbjct: 1 MNAIKKINEINYKELENNISDSASWHADFRDSSYIFIGFLPQELKEDDVIKIFSQYGIPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKK 111
+NLV+DK TGK RGF ++ YED R +NLNG QI + I+VDHV Y K
Sbjct: 61 HINLVKDKETGKSRGFCYLKYEDYRSCILAVDNLNGVQIFNKRIKVDHVHYYLK 114
>gi|255716984|ref|XP_002554773.1| KLTH0F13442p [Lachancea thermotolerans]
gi|238936156|emb|CAR24336.1| KLTH0F13442p [Lachancea thermotolerans CBS 6340]
Length = 134
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 90/130 (69%), Gaps = 9/130 (6%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ QV+ IQ+++ +E + G+ S ASWH +Y+D AYVY+GG+ +LTEGD+L VF+Q G
Sbjct: 1 MNQVRSIQNLSLRELENGVLSPKASWHHEYRDQAYVYIGGLNKELTEGDVLTVFSQYGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
VD+NLVRD+ TG+ +GF ++ +EDQR +NLNGA + GR I+VDH K E+
Sbjct: 61 VDINLVRDRETGESKGFCYLKFEDQRSSILAVDNLNGAVVAGRAIKVDHTV--YKPRGEN 118
Query: 117 EETRQRMREE 126
E RQ +R+E
Sbjct: 119 WEYRQAVRDE 128
>gi|363752215|ref|XP_003646324.1| hypothetical protein Ecym_4467 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889959|gb|AET39507.1| hypothetical protein Ecym_4467 [Eremothecium cymbalariae
DBVPG#7215]
Length = 173
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 87/135 (64%), Gaps = 7/135 (5%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q++ IQ ++ E GI S++ASWH +YKD AY++ G+ +LTEGD+L +F+Q G
Sbjct: 1 MNQIRSIQKLSDSELQQGILSEEASWHYQYKDQAYIHFSGLNLELTEGDILTIFSQFGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
D+ L RD+ TG+ RGF ++ YEDQR +NLNGA+I GRT++VDH + + E+ D
Sbjct: 61 TDLKLARDRDTGESRGFGYLKYEDQRSTILAVDNLNGAKICGRTLKVDHTFYHPRNEDVD 120
Query: 117 EETRQRMREERGVCR 131
+++ + V R
Sbjct: 121 YMNEMKLQLSKDVIR 135
>gi|395545903|ref|XP_003775408.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Sarcophilus harrisii]
Length = 310
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 68/85 (80%), Gaps = 6/85 (7%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR--- 88
Y+++ +V++GG+P++LTEGD++ VF+Q GEIV++NLVRDK TGK +GF F+ YEDQR
Sbjct: 13 YRENXWVFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTI 72
Query: 89 ---NNLNGAQILGRTIRVDHVAKYK 110
+N NG +I GRTIRVDHVA Y+
Sbjct: 73 LAVDNFNGIKIRGRTIRVDHVANYR 97
>gi|50290711|ref|XP_447788.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527099|emb|CAG60737.1| unnamed protein product [Candida glabrata]
Length = 169
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 76/110 (69%), Gaps = 7/110 (6%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q+K IQ IN KE + GI + SWH +YKD AY+++GG+ LTEGDLL +F+Q G
Sbjct: 1 MNQIKAIQRINEKELEAGILKPEHSWHQEYKDQAYIFIGGLNRQLTEGDLLTIFSQYGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHV 106
VDV LVRDK T + +GFAF+ YEDQR +NLNG + GR I+VDH+
Sbjct: 61 VDVLLVRDKETHESKGFAFLKYEDQRSTILAVDNLNGITVAGRQIKVDHI 110
>gi|221055439|ref|XP_002258858.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193808928|emb|CAQ39631.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 287
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 78/116 (67%), Gaps = 6/116 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
M +++ ++ +N E +D ASWH +YKDS+Y+Y+G + LTEGD++ VF+Q G
Sbjct: 1 MGIFDKIRSVEKLNEAELKNIGNDQASWHDQYKDSSYIYIGNLDSRLTEGDIVIVFSQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
E +DVNLVRDK TGK +G+ F++YEDQR +N NG ++L R + VDH+ Y+
Sbjct: 61 EPIDVNLVRDKETGKSKGYCFLSYEDQRSTVLAVDNFNGYKLLDRPLVVDHILNYR 116
>gi|440802669|gb|ELR23598.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 355
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 8/112 (7%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ K IQ IN +EA LG+ ASWH +Y +S Y++VG + LTEGD++AVF Q G +
Sbjct: 1 MNITKEIQRINEREAALGLK--ASWHDEYANSPYIFVGNLDHGLTEGDIVAVFEQYGRVR 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY 109
D+N RDK TG P+GFAF+ Y+D R +NLNG Q++GRT+RVDHV Y
Sbjct: 59 DLNRARDKKTGDPKGFAFLGYQDPRSCILAVDNLNGIQLVGRTLRVDHVKNY 110
>gi|84999532|ref|XP_954487.1| RNA-binding protein [Theileria annulata]
gi|65305485|emb|CAI73810.1| RNA-binding protein, putative [Theileria annulata]
Length = 292
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 82/133 (61%), Gaps = 9/133 (6%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
P I ++ E GI + SWH +YKDS Y+++GG+ +TEGD++ VF+Q GE
Sbjct: 6 PAANTNAIHRLSELELKKGIIGEGSWHNQYKDSCYIFIGGLDHRMTEGDIIIVFSQFGEP 65
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK---E 113
+D+NL RDK TGK G+ F+ Y+DQR +N NG+ +LGR IRVDHV Y E
Sbjct: 66 IDINLKRDKDTGKSLGYCFLGYKDQRSTILAVDNFNGSTLLGRRIRVDHVMDYSAPVVYE 125
Query: 114 EEDEETRQRMREE 126
+E +E ++R+E
Sbjct: 126 DEVDEEGNKIRKE 138
>gi|156096969|ref|XP_001614518.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148803392|gb|EDL44791.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 299
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 77/116 (66%), Gaps = 6/116 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
M +++ ++ +N E S+ SWH +YKDS+Y+Y+G + LTEGD++ VF+Q G
Sbjct: 1 MGIFDKIRSVEKLNEAELKNIGSEQTSWHDQYKDSSYIYIGNLDSRLTEGDIVIVFSQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
E +DVNLVRDK TGK +G+ F++YEDQR +N NG ++L R + VDH+ Y+
Sbjct: 61 EPIDVNLVRDKETGKSKGYCFLSYEDQRSTVLAVDNFNGYKLLDRPLVVDHILNYR 116
>gi|156086052|ref|XP_001610435.1| RNA-binding protein [Babesia bovis T2Bo]
gi|154797688|gb|EDO06867.1| RNA-binding protein, putative [Babesia bovis]
Length = 248
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 6/123 (4%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
P + I ++ E + GI ++SWH +YKDS Y+++GG+ +TEGD++ VF+Q G+
Sbjct: 6 PSANISAISRLSEFELEKGIIGESSWHNRYKDSCYIFIGGLHRRMTEGDIIIVFSQFGDP 65
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+D++L RDK TG RG+ F+ Y DQR +N NG+ +LGR IRVDHV YK E +
Sbjct: 66 IDIHLKRDKKTGASRGYCFLGYRDQRSTILAVDNFNGSTLLGRRIRVDHVLDYKAPVEYE 125
Query: 117 EET 119
+E
Sbjct: 126 DEV 128
>gi|291002051|ref|XP_002683592.1| RRM motif-containing protein [Naegleria gruberi]
gi|284097221|gb|EFC50848.1| RRM motif-containing protein [Naegleria gruberi]
Length = 284
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 85/126 (67%), Gaps = 8/126 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDD-ASWHAKYKD-SAYVYVGGIPFDLTEGDLLAVFAQCGE 61
+ + K+I +N KE LG ++ +SWH + K+ +AY+Y+GG+ F LTEGDLL+VF+Q GE
Sbjct: 1 MKRAKQINELNQKELSLGYTNTPSSWHHQEKNRTAYIYIGGLDFRLTEGDLLSVFSQYGE 60
Query: 62 IVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE 115
IVD++LVR++ +GF F+AYED R +NLNG ++ GR I VDH Y KK E
Sbjct: 61 IVDIDLVREEQELTSKGFCFIAYEDVRSTILAIDNLNGIELGGRIICVDHAPNYYKKIVE 120
Query: 116 DEETRQ 121
D E +Q
Sbjct: 121 DPEEQQ 126
>gi|401406458|ref|XP_003882678.1| hypothetical protein NCLIV_024340 [Neospora caninum Liverpool]
gi|325117094|emb|CBZ52646.1| hypothetical protein NCLIV_024340 [Neospora caninum Liverpool]
Length = 279
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 83/119 (69%), Gaps = 8/119 (6%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVN 66
++ + +N E ++ +ASWH Y++S+Y+++GG+ LTEGD++ VF+Q GE VD++
Sbjct: 20 IQAVWKLNELELKHNLTGEASWHWTYRNSSYIFIGGLDVRLTEGDIIIVFSQWGEPVDIH 79
Query: 67 LVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--KKEEEDE 117
LVRD+ TG P+GF F+AYEDQR +N NG ++L T+RVDH Y+ +K+E+D+
Sbjct: 80 LVRDRKTGVPKGFCFLAYEDQRSTILAVDNANGMKLLNSTLRVDHCKNYRPPRKDEDDD 138
>gi|50307365|ref|XP_453661.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642795|emb|CAH00757.1| KLLA0D13420p [Kluyveromyces lactis]
Length = 166
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 87/130 (66%), Gaps = 11/130 (8%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q++ IQ ++ +E + GI ++SWH +YKD AY+ GG+ +LTE D+L +F+Q G
Sbjct: 1 MNQIRSIQKLSERELECGILKPESSWHHEYKDQAYINFGGMHLELTEADILTIFSQYGCP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEE- 115
VD+ LVRD+ TGK +GF F+ YEDQR +NLNGA++ GR IRVDH A Y+ + +E
Sbjct: 61 VDIKLVRDQTTGKSKGFGFLKYEDQRSTILAVDNLNGAKVCGRLIRVDH-AFYRPRSDEA 119
Query: 116 --DEETRQRM 123
+E RQ +
Sbjct: 120 EYEEAVRQEL 129
>gi|70946190|ref|XP_742836.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56522033|emb|CAH76281.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 288
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 81/117 (69%), Gaps = 8/117 (6%)
Query: 1 MNPLTQVKRIQHINSKEA-DLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
M ++K I+ +N E +LG ++ ASWH +YK+S+Y+Y+G + LTEGD++ VF+Q
Sbjct: 1 MGIFDKIKSIEKLNETELKNLGTTN-ASWHDQYKESSYIYIGNLDNRLTEGDIVIVFSQF 59
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
GE +DVNLVRDK TGK +G+ F+AYEDQR +N NG ++L + + VDH+ Y+
Sbjct: 60 GEPIDVNLVRDKETGKSKGYCFLAYEDQRSTILAVDNFNGFKLLDKPLVVDHILNYR 116
>gi|410084038|ref|XP_003959596.1| hypothetical protein KAFR_0K01050 [Kazachstania africana CBS 2517]
gi|372466188|emb|CCF60461.1| hypothetical protein KAFR_0K01050 [Kazachstania africana CBS 2517]
Length = 154
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 84/123 (68%), Gaps = 8/123 (6%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q++ I+ I+ E GI S D SWH YKD AYV++GG+ DLTEGD+L +F+Q G
Sbjct: 1 MNQIRSIKKISENELHNGILSSDLSWHNDYKDQAYVFIGGLNKDLTEGDILTIFSQYGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
VD+ L RDK +G+ +GFAF+ YEDQR +NLNG++I GR I+VDH A Y+ +++
Sbjct: 61 VDIYLARDKYSGESKGFAFLKYEDQRSTVLAIDNLNGSKIAGRIIQVDH-AFYEPRDDSK 119
Query: 117 EET 119
E T
Sbjct: 120 EYT 122
>gi|302894521|ref|XP_003046141.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
gi|256727068|gb|EEU40428.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
Length = 307
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 76/102 (74%), Gaps = 7/102 (6%)
Query: 23 SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV 82
+ + SWH Y+D+AY+Y GG+P++L+EGD++ +F+Q GE V + LVRDK TGK +GF ++
Sbjct: 4 TPEGSWHTDYRDTAYIYFGGLPYELSEGDVVTIFSQFGEPVFLKLVRDKETGKSKGFGWL 63
Query: 83 AYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 118
YEDQR +NL GA+I GR +RVDH A+YK +++ED E
Sbjct: 64 KYEDQRSTDLAVDNLGGAEIGGRLVRVDH-ARYKARDDEDPE 104
>gi|148697138|gb|EDL29085.1| RNA binding motif protein, X-linked 2, isoform CRA_a [Mus musculus]
Length = 296
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 79/136 (58%), Gaps = 37/136 (27%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MNPLT+VK +GG+P++LTEGD++ VF+Q G
Sbjct: 1 MNPLTKVK------------------------------LIGGLPYELTEGDIICVFSQYG 30
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y+ +E
Sbjct: 31 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQE 90
Query: 115 -EDEETRQRMREERGV 129
ED + R +E+G
Sbjct: 91 SEDVDDVTRELQEKGC 106
>gi|210075519|ref|XP_501900.2| YALI0C16368p [Yarrowia lipolytica]
gi|199425287|emb|CAG82220.2| YALI0C16368p [Yarrowia lipolytica CLIB122]
Length = 320
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ IN++E G S ASWH Y D+AY+Y+GG+ LTE D+ VF+Q G
Sbjct: 1 MNAIRKTTQINNQELAEGTSISASWHNDYNDTAYIYIGGLESKLTEMDIATVFSQFGNPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
V L RD+ TGK RGFA++ YEDQR +N NG ++LGRT+RVDH + EE D
Sbjct: 61 HVKLSRDQKTGKSRGFAWLKYEDQRSTVLAVDNFNGVELLGRTMRVDHTYYESRDEEGDA 120
Query: 118 ETRQRMREER 127
+ + + + R
Sbjct: 121 KEVEMLNKAR 130
>gi|322702604|gb|EFY94239.1| U2 snRNP component IST3 [Metarhizium anisopliae ARSEF 23]
Length = 294
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 73/102 (71%), Gaps = 7/102 (6%)
Query: 23 SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV 82
+ + SWH Y+D+A++Y GG+P+DLTEGD++ +F+Q GE V + L RDK TGK +GF ++
Sbjct: 4 TPEGSWHVDYRDTAFIYFGGLPYDLTEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWL 63
Query: 83 AYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 118
YEDQR +NL GA I GR I VDH A+YK +++ED E
Sbjct: 64 KYEDQRSTDLAVDNLGGADISGRMISVDH-ARYKPRDDEDPE 104
>gi|403220621|dbj|BAM38754.1| RNA-binding motif protein, X-linked 2 [Theileria orientalis strain
Shintoku]
Length = 291
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 75/122 (61%), Gaps = 6/122 (4%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
P I ++ E G + SWH +YKDS Y+++GG+ +TEGD++ VF+Q G+
Sbjct: 6 PAANTNAISRLSELELKRGTLGEGSWHHQYKDSCYIFIGGLDTRMTEGDIIIVFSQFGDP 65
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+D+NL RDK TGK G+ F+ Y DQR +N NG+ +LGR IRVDHV YK E +
Sbjct: 66 IDINLKRDKITGKSLGYCFLGYRDQRSTILAVDNFNGSTLLGRRIRVDHVMDYKAPVEYE 125
Query: 117 EE 118
+E
Sbjct: 126 DE 127
>gi|68069647|ref|XP_676735.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56496565|emb|CAH99460.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 189
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 82/117 (70%), Gaps = 8/117 (6%)
Query: 1 MNPLTQVKRIQHINSKEA-DLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
M ++K I+ +N E +LG +++ASWH +YK+S+Y+Y+G + LTEGD++ VF+Q
Sbjct: 1 MGIFDKIKSIEKLNETELKNLG-TNNASWHDQYKESSYIYIGNLDTRLTEGDIVIVFSQF 59
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
GE +DVNLVRDK TGK +G+ F+AYEDQR +N NG ++L + + VDH+ Y+
Sbjct: 60 GEPIDVNLVRDKETGKSKGYCFLAYEDQRSTILAVDNFNGFKLLDKPLVVDHILNYR 116
>gi|401886800|gb|EJT50818.1| hypothetical protein A1Q1_08031 [Trichosporon asahii var. asahii
CBS 2479]
Length = 310
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 74/98 (75%), Gaps = 7/98 (7%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
+WH ++KD+AY+YVGG+ DL+EGD++ +F+Q GEI D+N+ RDK TG RGF FV Y D
Sbjct: 2 NWHDEFKDTAYIYVGGLHPDLSEGDVITIFSQWGEIADINMPRDKETGASRGFGFVMYMD 61
Query: 87 QR------NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 118
QR +N++GA++LGR ++VDH A+YK+ + +EE
Sbjct: 62 QRSTVLAVDNMSGAEVLGRKLKVDH-ARYKQPGKRNEE 98
>gi|71032247|ref|XP_765765.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352722|gb|EAN33482.1| RNA-binding protein, putative [Theileria parva]
Length = 310
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 72/113 (63%), Gaps = 6/113 (5%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
P I ++ E GI + SWH +YKDS Y+++GG+ +TEGD++ VF+Q GE
Sbjct: 6 PAANTNAIHRLSELELKKGIIGEGSWHNQYKDSCYIFIGGLDHRMTEGDIIIVFSQFGEP 65
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKY 109
+D+NL RDK TGK G+ F+ Y+DQR +N NG+ +LGR IRVDHV Y
Sbjct: 66 IDINLKRDKDTGKSLGYCFLGYKDQRSTILAVDNFNGSTLLGRRIRVDHVMDY 118
>gi|45187890|ref|NP_984113.1| ADR017Wp [Ashbya gossypii ATCC 10895]
gi|44982674|gb|AAS51937.1| ADR017Wp [Ashbya gossypii ATCC 10895]
gi|374107329|gb|AEY96237.1| FADR017Wp [Ashbya gossypii FDAG1]
Length = 173
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 86/132 (65%), Gaps = 9/132 (6%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q++ IQ ++ E + GI S++ASWH +YKD AY++ G+ +LTEGD+L VF+Q G
Sbjct: 1 MNQIRSIQKLSETELEHGILSEEASWHYQYKDQAYIHFSGLNVELTEGDILTVFSQFGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
D+ LVRD+ TG+ RGF F+ YEDQR +NLNG + GR ++VDH + + +ED
Sbjct: 61 TDLKLVRDRETGESRGFGFLKYEDQRSTVLAVDNLNGVNLCGRVLKVDHC--FYEPRDED 118
Query: 117 EETRQRMREERG 128
E + +REE
Sbjct: 119 EAYVKTVREELA 130
>gi|254565187|ref|XP_002489704.1| hypothetical protein [Komagataella pastoris GS115]
gi|238029500|emb|CAY67423.1| hypothetical protein PAS_chr1-1_0468 [Komagataella pastoris GS115]
Length = 192
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 84/135 (62%), Gaps = 8/135 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +VK+I+ +N +E D I +ASWH +Y+DSAY+Y+G +P+++TE DLL +F+Q G
Sbjct: 1 MNKVKQIEKLNQQELDQNIQFEASWHQEYRDSAYIYIGSLPYEITETDLLTIFSQYGVPT 60
Query: 64 DVNLVRDKGT-GKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
V L RD GK +GFAF+ YED R +NLNG +I RTI VDH Y+ +D
Sbjct: 61 HVKLARDYANGGKSKGFAFLKYEDWRSTALAVDNLNGIKIKDRTISVDHTT-YRPAVYQD 119
Query: 117 EETRQRMREERGVCR 131
E+ + +E + R
Sbjct: 120 EDDERMDKEWEAMVR 134
>gi|328350123|emb|CCA36523.1| Polyadenylate-binding protein 1-like [Komagataella pastoris CBS
7435]
Length = 268
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 86/139 (61%), Gaps = 10/139 (7%)
Query: 2 NP--LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
NP + +VK+I+ +N +E D I +ASWH +Y+DSAY+Y+G +P+++TE DLL +F+Q
Sbjct: 73 NPGSMNKVKQIEKLNQQELDQNIQFEASWHQEYRDSAYIYIGSLPYEITETDLLTIFSQY 132
Query: 60 GEIVDVNLVRDKGT-GKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK 112
G V L RD GK +GFAF+ YED R +NLNG +I RTI VDH Y+
Sbjct: 133 GVPTHVKLARDYANGGKSKGFAFLKYEDWRSTALAVDNLNGIKIKDRTISVDHTT-YRPA 191
Query: 113 EEEDEETRQRMREERGVCR 131
+DE+ + +E + R
Sbjct: 192 VYQDEDDERMDKEWEAMVR 210
>gi|254585211|ref|XP_002498173.1| ZYRO0G04004p [Zygosaccharomyces rouxii]
gi|238941067|emb|CAR29240.1| ZYRO0G04004p [Zygosaccharomyces rouxii]
Length = 167
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 92/141 (65%), Gaps = 9/141 (6%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q+K I+ IN E GI + + SWH +Y++ AY+++GG+ +LTE D+L VF+Q G
Sbjct: 1 MNQIKAIERINEAELSQGILTHEQSWHYEYRNQAYIFIGGLHKELTEADVLTVFSQYGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
VD+ LVRD+ G+ RGFA++ YEDQR +NLNGA + GR IRVDH A Y+ + ++D
Sbjct: 61 VDLKLVRDRENGESRGFAYLKYEDQRSTVLAVDNLNGAIVAGRRIRVDH-ALYEPR-DDD 118
Query: 117 EETRQRMREERGVCRAFQRGE 137
+ R+ +REE + GE
Sbjct: 119 WDYREAVREELDKDKVLVPGE 139
>gi|367017792|ref|XP_003683394.1| hypothetical protein TDEL_0H03240 [Torulaspora delbrueckii]
gi|359751058|emb|CCE94183.1| hypothetical protein TDEL_0H03240 [Torulaspora delbrueckii]
Length = 167
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 85/128 (66%), Gaps = 10/128 (7%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ Q++ IQ IN E GI S + SWH +YKD AY+++GG+ +LTE D+L +F+Q G
Sbjct: 1 MNQIRAIQRINDTELSSGILSPNLSWHNEYKDRAYIFIGGLNVELTEADILTIFSQYGIP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE-- 114
VDV LVRD+ TG +GF ++ YEDQR +NLNG++I GR I+VDH A Y +++
Sbjct: 61 VDVFLVRDRETGDSKGFGYLKYEDQRSAVLAIDNLNGSKIAGRIIKVDH-AWYTPRDDMI 119
Query: 115 EDEETRQR 122
E +E QR
Sbjct: 120 EYQEAVQR 127
>gi|389583407|dbj|GAB66142.1| RNA-binding protein [Plasmodium cynomolgi strain B]
Length = 208
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 77/116 (66%), Gaps = 6/116 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
M +++ ++ +N E +D SWH +YKDS+Y+Y+G + LTEGD++ VF+Q G
Sbjct: 1 MGIFDKIRSVEKLNEAELKNIGNDQTSWHDQYKDSSYIYIGNLDSRLTEGDIVIVFSQFG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
E +DVNLVRDK TGK +G+ F++YEDQR +N NG ++L R + VDH+ Y+
Sbjct: 61 EPIDVNLVRDKETGKSKGYCFLSYEDQRSTVLAVDNFNGYKLLDRPLVVDHILNYR 116
>gi|429328603|gb|AFZ80363.1| hypothetical protein BEWA_032160 [Babesia equi]
Length = 291
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 84/133 (63%), Gaps = 9/133 (6%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
P + IQ ++ E G ++SWH +YKDS Y+Y+GG+ +TEGD++ VF+Q GE
Sbjct: 6 PGANISAIQRLSELELQTGAIGESSWHNRYKDSCYIYIGGLDKRMTEGDIIIVFSQFGEP 65
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK---E 113
+D+NL R+ TG+ G+ F+ Y+DQR +N NG+ +LGR IRVDHV YK E
Sbjct: 66 IDINLKRNGKTGESLGYCFLGYKDQRSTILAVDNFNGSTLLGRRIRVDHVLDYKAPVIYE 125
Query: 114 EEDEETRQRMREE 126
+E +E ++R+E
Sbjct: 126 DECDEDGNKIRKE 138
>gi|209877655|ref|XP_002140269.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555875|gb|EEA05920.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 207
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 70/96 (72%), Gaps = 6/96 (6%)
Query: 25 DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY 84
+ SWH+ Y++SAY+Y+GG+ + LTEGD++ VF+Q GE +DVNL+RD TGK +GF F+AY
Sbjct: 26 EGSWHSTYRNSAYIYIGGLNYGLTEGDIVIVFSQWGEPIDVNLIRDPKTGKSKGFCFLAY 85
Query: 85 EDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
EDQ+ +N N +LG ++VDHV+ YK K +
Sbjct: 86 EDQQSTILAVDNANDMILLGNKLKVDHVSNYKVKSD 121
>gi|403216110|emb|CCK70608.1| hypothetical protein KNAG_0E03510 [Kazachstania naganishii CBS
8797]
Length = 172
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 76/107 (71%), Gaps = 7/107 (6%)
Query: 6 QVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVD 64
Q + IQ IN E D GI S + SWH +Y+D AY+++GG+ +LTEGD+L VF+Q G VD
Sbjct: 3 QARAIQKINQAELDSGIISPELSWHDEYRDQAYIFIGGLNKNLTEGDILTVFSQFGVPVD 62
Query: 65 VNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDH 105
+ LVRD+ +G+ +GFA++ YEDQR +N+NG +I GR ++VDH
Sbjct: 63 ILLVRDRNSGESKGFAYLKYEDQRSTILAVDNMNGVKIAGRMVQVDH 109
>gi|366988985|ref|XP_003674260.1| hypothetical protein NCAS_0A13220 [Naumovozyma castellii CBS 4309]
gi|342300123|emb|CCC67880.1| hypothetical protein NCAS_0A13220 [Naumovozyma castellii CBS 4309]
Length = 171
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 87/138 (63%), Gaps = 8/138 (5%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+++ K IQ IN +E GI + + SWH +YKD AY+Y+GG+ +LTEGD+++VF+Q G
Sbjct: 1 MSKAKSIQQINERELQSGILTTEQSWHYQYKDQAYIYIGGLDKELTEGDIISVFSQYGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
VD+ LV D TG+ +GFAF+ YEDQR +NLNG ++ TI+VDH + E+ D
Sbjct: 61 VDLLLVNDNQTGESKGFAFLKYEDQRSTVLAIDNLNGVKVGSNTIQVDHTFYEPRDEQWD 120
Query: 117 E-ETRQRMREERGVCRAF 133
ET + E+ V R
Sbjct: 121 YRETMKNELEKDFVVRGI 138
>gi|367000485|ref|XP_003684978.1| hypothetical protein TPHA_0C03940 [Tetrapisispora phaffii CBS 4417]
gi|357523275|emb|CCE62544.1| hypothetical protein TPHA_0C03940 [Tetrapisispora phaffii CBS 4417]
Length = 145
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 85/130 (65%), Gaps = 9/130 (6%)
Query: 4 LTQVKRIQHINSKEADLGISD-DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ ++K I IN+ E + GI D SWH +Y+D AYVY+GG+ +LTE D+L +F+Q G
Sbjct: 1 MNKIKSINAINASELNSGILDASLSWHDEYRDQAYVYIGGLNKELTEHDILTIFSQFGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
D+ LVRDK T + +GFA++ YEDQR +NLNG++I GR I VDHV + + ++D
Sbjct: 61 TDIKLVRDKETSESKGFAYLKYEDQRSCVLAIDNLNGSKIAGRNIVVDHV--FYEYRDDD 118
Query: 117 EETRQRMREE 126
E R ++ E
Sbjct: 119 LEYRNAVKSE 128
>gi|156835802|ref|XP_001642166.1| hypothetical protein Kpol_150p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112599|gb|EDO14308.1| hypothetical protein Kpol_150p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 138
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 73/110 (66%), Gaps = 7/110 (6%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ ++K IQ IN E + G+ S SWH YKD AY+Y+G + DLTEGD+L VF+Q G
Sbjct: 1 MNKIKAIQKINENELENGVLSPSLSWHDTYKDQAYIYIGRLNKDLTEGDILTVFSQFGVP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHV 106
VD+ LVR+ TG RGFA++ YEDQR +NLNGA+I G I VDH+
Sbjct: 61 VDIKLVRENETGSSRGFAYLKYEDQRSTILAVDNLNGAEIAGNAIVVDHI 110
>gi|428169524|gb|EKX38457.1| hypothetical protein GUITHDRAFT_48511, partial [Guillardia theta
CCMP2712]
Length = 83
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 6/83 (7%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
SWHA Y DSAY+YVGG+ + LTEGD++ +F+Q GE VDV+L RDK TGK GFAF+AYED
Sbjct: 1 SWHANYADSAYIYVGGLDYRLTEGDVITIFSQYGEPVDVHLPRDKKTGKSHGFAFLAYED 60
Query: 87 QR------NNLNGAQILGRTIRV 103
QR +NLNG+++LGRT+RV
Sbjct: 61 QRSTNLAVDNLNGSKLLGRTLRV 83
>gi|395754448|ref|XP_003780626.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Pongo abelii]
Length = 317
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 69/94 (73%), Gaps = 9/94 (9%)
Query: 37 YVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NN 90
+ +GG+P++LTEGD++ VF+Q GEIV++NLVRDK TGK +GF F+ YEDQR +N
Sbjct: 3 FSLLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDN 62
Query: 91 LNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 121
NG +I GRTIRVDHV+ Y K EE D+ TRQ
Sbjct: 63 FNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRQ 96
>gi|124505047|ref|XP_001351265.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|4494008|emb|CAB39067.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 309
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 77/116 (66%), Gaps = 6/116 (5%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
M +++ I+ +N E ++D+SWH +Y+DS+Y+Y+G + LTEGD++ VF+Q G
Sbjct: 1 MGLFDKIRNIEKLNEAELKNIGNNDSSWHDQYRDSSYIYIGNLDNRLTEGDIVIVFSQYG 60
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
E +DVNLVRD TGK +G+ F++Y DQR +N NG ++L R + VDH+ Y+
Sbjct: 61 EPIDVNLVRDNETGKSKGYCFLSYADQRSTILAVDNFNGYKLLERPLVVDHILNYR 116
>gi|410056965|ref|XP_003954131.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2, partial [Pan troglodytes]
Length = 323
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 69/94 (73%), Gaps = 9/94 (9%)
Query: 37 YVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NN 90
+ +GG+P++LTEGD++ VF+Q GEIV++NLVRDK TGK +GF F+ YEDQR +N
Sbjct: 9 FSLLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDN 68
Query: 91 LNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 121
NG +I GRTIRVDHV+ Y K EE D+ TRQ
Sbjct: 69 FNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRQ 102
>gi|118379871|ref|XP_001023101.1| hypothetical protein TTHERM_00353440 [Tetrahymena thermophila]
gi|89304868|gb|EAS02856.1| hypothetical protein TTHERM_00353440 [Tetrahymena thermophila
SB210]
Length = 1019
Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats.
Identities = 60/120 (50%), Positives = 80/120 (66%), Gaps = 9/120 (7%)
Query: 1 MNPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCG 60
MN T+VK Q+I KE G+ SWH YKDSAY+++GG+ +DL EGD+ VF+Q G
Sbjct: 741 MNNSTKVK--QYI-EKELKQGVETGQSWHNDYKDSAYIFIGGLNYDLNEGDISTVFSQWG 797
Query: 61 EIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NLNGAQILGRTIRVDHVAKYKKKEE 114
+IVD+ LVRDK TG+ +G+ F+AYEDQR+ N N + GR I V+HV+KYK E
Sbjct: 798 QIVDLRLVRDKKTGRSKGYCFLAYEDQRSTILAVENFNQINLCGRIIGVNHVSKYKPPRE 857
>gi|399216607|emb|CCF73294.1| unnamed protein product [Babesia microti strain RI]
Length = 158
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 81/119 (68%), Gaps = 6/119 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
++ ++ I+ ++ E + D++SWH +YKDS Y+Y+GG+ LTEGD++ VF+Q GE +
Sbjct: 1 MSGIEDIRKLSEAELKQDLRDESSWHYRYKDSCYIYIGGLHKKLTEGDIIIVFSQFGEPI 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
D+NLVRD TG+ +GF F+ Y +Q+ +N+NG ++L + ++VDHV YK ++D
Sbjct: 61 DINLVRDSKTGESKGFCFLGYRNQKSTILAVDNMNGYKLLDKVLKVDHVLDYKAPLKKD 119
>gi|46135807|ref|XP_389595.1| hypothetical protein FG09419.1 [Gibberella zeae PH-1]
Length = 306
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 70/96 (72%), Gaps = 7/96 (7%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
SWH Y+D+AY+Y GG+P++L+EGD++ +F+Q GE V + L RDK TGK +GF ++ YED
Sbjct: 11 SWHTDYRDTAYIYFGGLPYELSEGDVITIFSQFGEPVWLKLARDKETGKSKGFGWLKYED 70
Query: 87 QR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
QR +NL GA + GR + VDH A+YK +++ED
Sbjct: 71 QRSTDLAVDNLGGADMGGRLVSVDH-ARYKMRDDED 105
>gi|395848769|ref|XP_003804091.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Otolemur garnettii]
Length = 373
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 87/139 (62%), Gaps = 16/139 (11%)
Query: 2 NPLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ--- 58
+PLT+VK I +N +E LG++D SWH++YKDSA++++GG+P++LTEGD++ VF+Q
Sbjct: 32 SPLTKVKLINELNEREVQLGVADKVSWHSQYKDSAWIFLGGLPYELTEGDIICVFSQYLH 91
Query: 59 ---CGEIVDVNLVRDKGTGKP-RGF---AFVAYEDQRNN--LNGAQILGRTIRVDHVAKY 109
G V V G+ +P R F FV+ + L +I GRTIRVDHV+ Y
Sbjct: 92 PFPSGNFVSSLRVLHFGSLRPLRPFPSGPFVSLHSFPLDTFLPSLRIKGRTIRVDHVSNY 151
Query: 110 ---KKKEEEDEETRQRMRE 125
K EE DEETR R++E
Sbjct: 152 RAPKDSEELDEETR-RLQE 169
>gi|361127085|gb|EHK99065.1| putative Zinc finger CCCH domain-containing protein 42 [Glarea
lozoyensis 74030]
Length = 215
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 70/90 (77%), Gaps = 7/90 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------ 88
+ Y+Y+GG+PF+L+EGD++ +F+Q GE V +NL+RDK TGK +GFAF+ YEDQR
Sbjct: 41 TTYIYIGGLPFELSEGDIITIFSQFGEPVYINLIRDKETGKSKGFAFLKYEDQRSTDLAV 100
Query: 89 NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 118
+NL G+ I+GRT++VDH +YKKK++ +E
Sbjct: 101 DNLGGSVIMGRTLKVDH-TRYKKKDDAPDE 129
>gi|334349632|ref|XP_001381460.2| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Monodelphis domestica]
Length = 332
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 6/81 (7%)
Query: 40 VGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNG 93
+GG+P++LTEGD++ VF+Q GEIV++NLVRDK TGK +GF F+ YEDQR +N NG
Sbjct: 1 LGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNG 60
Query: 94 AQILGRTIRVDHVAKYKKKEE 114
+I GRTIRVDHVA Y+ ++
Sbjct: 61 IKIRGRTIRVDHVANYRPPKD 81
>gi|340516662|gb|EGR46910.1| predicted protein [Trichoderma reesei QM6a]
Length = 93
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 70/94 (74%), Gaps = 7/94 (7%)
Query: 23 SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV 82
S DASWH Y+D+A++Y GG+P+DL+EGD++ +F+Q GE V + LVRDK TGK +GF ++
Sbjct: 1 SPDASWHVDYRDTAFIYFGGLPYDLSEGDIITIFSQYGEPVFLKLVRDKETGKSKGFGWL 60
Query: 83 AYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
YEDQR +NL G +I GR +RVDH A+Y+
Sbjct: 61 KYEDQRSTDLAVDNLGGTEIGGRLLRVDH-ARYQ 93
>gi|149455712|ref|XP_001516504.1| PREDICTED: hypothetical protein LOC100086370, partial
[Ornithorhynchus anatinus]
Length = 258
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%), Gaps = 7/95 (7%)
Query: 42 GIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQ 95
G+P++LTEGD+L VF+Q GEIV++NLVRDK TGK +GF F+ YEDQR +N NG +
Sbjct: 1 GLPYELTEGDVLCVFSQYGEIVNINLVRDKKTGKSKGFGFLCYEDQRSTILAVDNFNGIK 60
Query: 96 ILGRTIRVDHVAKYK-KKEEEDEETRQRMREERGV 129
I GRTIRVDHVA Y+ K+ ED + + ERG
Sbjct: 61 IKGRTIRVDHVANYRPPKDSEDVDDATKALRERGC 95
>gi|213401655|ref|XP_002171600.1| RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|211999647|gb|EEB05307.1| RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 234
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 8/116 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ I+ +N KE LG S ASWH YKDSAY+Y+G + L E D++ +F++ G V
Sbjct: 1 MNTIREIERLNEKE--LGKSLSASWHQDYKDSAYIYIGNLDKSLNEHDVVRIFSEFGTPV 58
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKE 113
D++LVRDK T + RGFAF+ Y DQR +N+ ++ R +RVDHVA Y+ E
Sbjct: 59 DIHLVRDKETKESRGFAFLKYADQRSTILAVDNMTNVKLHDRLVRVDHVANYRVPE 114
>gi|145552619|ref|XP_001461985.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429822|emb|CAK94612.1| unnamed protein product [Paramecium tetraurelia]
Length = 304
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 74/113 (65%), Gaps = 8/113 (7%)
Query: 8 KRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNL 67
K I+ +N E L +WH +Y S+Y+++ + + + EGD+ VF+Q GEIVDV+L
Sbjct: 3 KTIKKLN--EVALDNIQATTWHDEYNKSSYIFIANLNYAMNEGDIAIVFSQYGEIVDVHL 60
Query: 68 VRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEE 114
VRDK TGK +GF F+AYEDQR +N N A+I GR +RVDHV ++K +E
Sbjct: 61 VRDKITGKSKGFCFLAYEDQRSTILAVDNFNHAEICGRLLRVDHVREFKPPKE 113
>gi|260945497|ref|XP_002617046.1| hypothetical protein CLUG_02490 [Clavispora lusitaniae ATCC 42720]
gi|238848900|gb|EEQ38364.1| hypothetical protein CLUG_02490 [Clavispora lusitaniae ATCC 42720]
Length = 222
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 71/109 (65%), Gaps = 6/109 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I +N KE +SD ASWHA YKD++Y+Y+G + DL + D+L +F+Q G
Sbjct: 1 MNAIQKILSMNEKELAQNVSDAASWHADYKDTSYIYIGNLHQDLKDEDILKIFSQYGNPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHV 106
+N+++DK TGK RGF ++ YED R +NLNG +I R +++DH
Sbjct: 61 HLNMIKDKETGKSRGFCYLKYEDHRSCILAIDNLNGVKIFDRPMKIDHT 109
>gi|328858704|gb|EGG07816.1| hypothetical protein MELLADRAFT_43078 [Melampsora larici-populina
98AG31]
Length = 133
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 76/135 (56%), Gaps = 30/135 (22%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ + IN KE LGI ASWH YKDSAY+Y+GG+ LTEGD++ +F+Q GE V
Sbjct: 1 MNNIRATKAINEKELALGIQ--ASWHDDYKDSAYIYIGGLDTGLTEGDVITIFSQYGEPV 58
Query: 64 DVNLVRDK----------------------GTGKPRGFAFVAYEDQR------NNLNGAQ 95
D+N+ + K G K RGF F+ YE+Q +NLNGA
Sbjct: 59 DINMPKAKPEQTKNESGNPEEAKSQVKTKAGPVKSRGFCFLMYENQLSTNLAVDNLNGAI 118
Query: 96 ILGRTIRVDHVAKYK 110
+LGRT+RVDH YK
Sbjct: 119 VLGRTLRVDHCKNYK 133
>gi|6322195|ref|NP_012270.1| Ist3p [Saccharomyces cerevisiae S288c]
gi|731908|sp|P40565.1|IST3_YEAST RecName: Full=U2 snRNP component IST3; AltName: Full=Increased
sodium tolerance protein 3; AltName: Full=U2 snRNP
protein SNU17
gi|557854|emb|CAA86207.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270052|gb|AAS56407.1| YIR005W [Saccharomyces cerevisiae]
gi|151943163|gb|EDN61498.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190406218|gb|EDV09485.1| U2 snRNP component IST3 [Saccharomyces cerevisiae RM11-1a]
gi|256274151|gb|EEU09061.1| Ist3p [Saccharomyces cerevisiae JAY291]
gi|259147264|emb|CAY80517.1| Ist3p [Saccharomyces cerevisiae EC1118]
gi|285812652|tpg|DAA08551.1| TPA: Ist3p [Saccharomyces cerevisiae S288c]
gi|323337228|gb|EGA78482.1| Ist3p [Saccharomyces cerevisiae Vin13]
gi|323348164|gb|EGA82418.1| Ist3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354514|gb|EGA86351.1| Ist3p [Saccharomyces cerevisiae VL3]
gi|346228216|gb|AEO21093.1| IST3 [synthetic construct]
gi|349578956|dbj|GAA24120.1| K7_Ist3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765028|gb|EHN06543.1| Ist3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298728|gb|EIW09824.1| Ist3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 148
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 74/106 (69%), Gaps = 7/106 (6%)
Query: 7 VKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
+ +IQ IN KE GI S SWH +YKD+AY+Y+G + +LTEGD+L VF++ G VDV
Sbjct: 1 MNKIQQINDKELQSGILSPHQSWHNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDV 60
Query: 66 NLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDH 105
L RD+ TG+ +GFA++ YEDQR +NLNG +I GR +++DH
Sbjct: 61 ILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALKIDH 106
>gi|323304472|gb|EGA58241.1| Ist3p [Saccharomyces cerevisiae FostersB]
gi|323308617|gb|EGA61859.1| Ist3p [Saccharomyces cerevisiae FostersO]
Length = 148
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 74/106 (69%), Gaps = 7/106 (6%)
Query: 7 VKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
+ +IQ IN KE GI S SWH +YKD+AY+Y+G + +LTEGD+L VF++ G VDV
Sbjct: 1 MNKIQQINDKELQSGILSPHQSWHNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDV 60
Query: 66 NLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDH 105
L RD+ TG+ +GFA++ YEDQR +NLNG +I GR +++DH
Sbjct: 61 ILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALKIDH 106
>gi|401839237|gb|EJT42544.1| IST3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 149
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 77/113 (68%), Gaps = 7/113 (6%)
Query: 7 VKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
+ +IQ IN +E GI S SWH++Y+D+AYVY+G + +LTEGD+L VF++ G VDV
Sbjct: 1 MNKIQEINDRELQSGILSPHLSWHSEYRDNAYVYIGNLNKELTEGDILTVFSEYGVPVDV 60
Query: 66 NLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK 112
L RD+ TG+ +GFA++ YEDQR +NLNG ++ GR +++DH KK
Sbjct: 61 ILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGVKVGGRPLKIDHTFYRPKK 113
>gi|300175056|emb|CBK20367.2| unnamed protein product [Blastocystis hominis]
Length = 301
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 70/113 (61%), Gaps = 6/113 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ ++ + +N KE + D SWH YKD ++Y GGI +L+EGD++ +F+Q GE+
Sbjct: 1 MNNIREVLRLNEKELENDTPFDCSWHQTYKDCPWIYFGGISPELSEGDIICMFSQWGEVE 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
D+NL+RD TGK +GF F+ YE+ +N +G ++LGR + VDH Y+
Sbjct: 61 DINLIRDHDTGKSKGFGFLRYENWLSCVLAVDNFSGMELLGRIVCVDHKRDYR 113
>gi|219111683|ref|XP_002177593.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410478|gb|EEC50407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 125
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 74/114 (64%), Gaps = 7/114 (6%)
Query: 4 LTQVKRIQHINSKEADLGIS-DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ +K I IN +E G++ ASWH +Y SA+VYVG + LTEGD++ V +Q GEI
Sbjct: 1 MNTIKEILRINEEELKRGLAGTAASWHQQYAQSAWVYVGNLDHALTEGDVICVLSQYGEI 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK 110
D++LVR++ TGK RGFAF YED R +N G ++ GR++RVDHV Y+
Sbjct: 61 EDLHLVREEDTGKSRGFAFCKYEDARSCVLAVDNFTGIELCGRSLRVDHVENYR 114
>gi|365760130|gb|EHN01872.1| Ist3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 167
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 77/113 (68%), Gaps = 7/113 (6%)
Query: 7 VKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
+ +I+ IN +E GI S SWH++Y+D+AYVY+G + +LTEGD+L VF++ G VDV
Sbjct: 1 MNKIREINDRELQSGILSPHLSWHSEYRDNAYVYIGNLNKELTEGDILTVFSEYGVPVDV 60
Query: 66 NLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKK 112
L RD+ TG+ +GFA++ YEDQR +NLNG ++ GR +++DH KK
Sbjct: 61 MLSRDENTGESQGFAYLKYEDQRSTILAVDNLNGVKVGGRPLKIDHTFYRPKK 113
>gi|255731053|ref|XP_002550451.1| predicted protein [Candida tropicalis MYA-3404]
gi|240132408|gb|EER31966.1| predicted protein [Candida tropicalis MYA-3404]
Length = 234
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 6/108 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ VK+I IN KE + S +SWH Y+D+ Y+Y+G IPF+L E D++ +F+Q G
Sbjct: 1 MNTVKQINQINQKELNSNTSYKSSWHYDYRDTNYIYIGNIPFNLNEKDIIIIFSQYGIPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDH 105
+NL++DK TGK RGF F+ Y + + +N NG ++ R +RVDH
Sbjct: 61 HINLIKDKETGKHRGFGFLKYANFKSCILAIDNFNGIKLGDRILRVDH 108
>gi|82793516|ref|XP_728072.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484235|gb|EAA19637.1| RNA recognition motif, putative [Plasmodium yoelii yoelii]
Length = 347
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 82/143 (57%), Gaps = 34/143 (23%)
Query: 1 MNPLTQVKRIQHINSKEA-DLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQC 59
M ++K I+ +N E +LG ++ ASWH +YK+S+Y+Y+G + LTEGD++ VF+Q
Sbjct: 1 MGIFDKIKSIEKLNETELKNLG-TNSASWHDQYKESSYIYIGNLDTRLTEGDIVIVFSQF 59
Query: 60 GEIVDVNLVRDKGT--------------------------GKPRGFAFVAYEDQR----- 88
GE +DVNLVRDK T GK +G+ F+AYEDQR
Sbjct: 60 GEPIDVNLVRDKETGVLANLALLRVFRFSTIFIYHFFFILGKSKGYCFLAYEDQRSTILA 119
Query: 89 -NNLNGAQILGRTIRVDHVAKYK 110
+N NG ++L + + VDH++ Y+
Sbjct: 120 VDNFNGFKLLDKPLVVDHISNYR 142
>gi|444324112|ref|XP_004182696.1| hypothetical protein TBLA_0J01830 [Tetrapisispora blattae CBS 6284]
gi|387515744|emb|CCH63177.1| hypothetical protein TBLA_0J01830 [Tetrapisispora blattae CBS 6284]
Length = 140
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 7/125 (5%)
Query: 4 LTQVKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
++Q K+IQ +N E I S + SWH Y D Y+++G + +LTEGD+L VF+Q G
Sbjct: 1 MSQYKKIQQLNDTELQNNILSIEKSWHYNYIDYGYIFIGNLNKNLTEGDILTVFSQFGNP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+D+ L+R+K T GFA++ YED R +NLNG+++ G T+++DH K + D
Sbjct: 61 IDLKLIRNKQTNHSMGFAYLKYEDSRSCILAIDNLNGSKVAGNTLKIDHFWHDPNKNKND 120
Query: 117 EETRQ 121
EE Q
Sbjct: 121 EEYYQ 125
>gi|150866279|ref|XP_001385825.2| hypothetical protein PICST_48043 [Scheffersomyces stipitis CBS
6054]
gi|149387535|gb|ABN67796.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 233
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 7/121 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++I IN KE S ASWH Y+D+ Y+Y+G I D+ E D++ +F+Q G
Sbjct: 1 MNSIQKINAINQKELATNTSYKASWHYDYRDTNYIYIGNIASDIEEKDIITIFSQYGVPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+N+++DK TG+ RGFAF+ Y + + +N NG + R +RVDH YK K++E+E
Sbjct: 61 HINMIKDKETGRHRGFAFLKYANMKSCVLAVDNFNGVVVYERKLRVDHTY-YKLKKDENE 119
Query: 118 E 118
+
Sbjct: 120 D 120
>gi|313224020|emb|CBY43539.1| unnamed protein product [Oikopleura dioica]
Length = 277
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------ 88
SA++Y G + + LTEGD+LAVF+Q GEI +VNLVRD+ TG +GF F+ YEDQR
Sbjct: 1 SAWIYAGNLSYKLTEGDILAVFSQFGEISNVNLVRDRETGTSKGFCFICYEDQRSTILAV 60
Query: 89 NNLNGAQILGRTIRVDHVAKYKKKEEEDE 117
+N NG ++ R +RVDHV +YK + D+
Sbjct: 61 DNFNGMELCNRPVRVDHVEEYKVPKIHDD 89
>gi|323333072|gb|EGA74473.1| Ist3p [Saccharomyces cerevisiae AWRI796]
Length = 104
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 71/103 (68%), Gaps = 7/103 (6%)
Query: 7 VKRIQHINSKEADLGI-SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDV 65
+ +IQ IN KE GI S SWH +YKD+AY+Y+G + +LTEGD+L VF++ G VDV
Sbjct: 1 MNKIQQINDKELQSGILSPHQSWHNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDV 60
Query: 66 NLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIR 102
L RD+ TG+ +GFA++ YEDQR +NLNG +I GR ++
Sbjct: 61 ILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALK 103
>gi|354473614|ref|XP_003499029.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Cricetulus
griseus]
Length = 356
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 22/122 (18%)
Query: 29 HAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR 88
H + K+SA V GG+P++LTEGD++ VF+Q GEIV++NLVRDK TGK +GF F+ YEDQR
Sbjct: 41 HYEAKESA-VRTGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQR 99
Query: 89 ------NNLNGAQILG--------------RTIRVDHVAKYKKKEE-EDEETRQRMREER 127
+N NG ++ + IRVDHV+ ++ +E ED + R +E+
Sbjct: 100 STVLAVDNFNGIKVTAYYAGFDWIFPVYGSKDIRVDHVSSFRAPQESEDMDEVTRELQEK 159
Query: 128 GV 129
G
Sbjct: 160 GC 161
>gi|429859411|gb|ELA34193.1| u2 snrnp component ist3 [Colletotrichum gloeosporioides Nara gc5]
Length = 318
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 59/79 (74%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +++ IQ +N KE + GIS + SWH Y+D+AY+Y GG+P++++EGD++ +F+Q GE V
Sbjct: 1 MNKIRAIQELNKKEIEHGISPEGSWHVDYRDTAYIYFGGLPYEMSEGDVITIFSQFGEPV 60
Query: 64 DVNLVRDKGTGKPRGFAFV 82
+ L RDK TGK +GF ++
Sbjct: 61 WLKLARDKETGKSKGFGWL 79
>gi|32398924|emb|CAD98389.1| putative RNA-binding protein, probable [Cryptosporidium parvum]
Length = 192
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 6/89 (6%)
Query: 28 WHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ 87
WH YK+S+Y+Y+ G+ LTEGD+ +F+Q GE +D+NL+RDK G +G+ F+ YEDQ
Sbjct: 49 WHNNYKNSSYIYISGLDLRLTEGDIAIIFSQWGEPIDINLIRDKKLGISKGYCFLCYEDQ 108
Query: 88 R------NNLNGAQILGRTIRVDHVAKYK 110
+ +N N +LG+ I+VDHV YK
Sbjct: 109 KSTILAVDNANDMILLGKHIKVDHVRDYK 137
>gi|320581779|gb|EFW95998.1| U2 snRNP component IST3 [Ogataea parapolymorpha DL-1]
Length = 172
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 69/111 (62%), Gaps = 9/111 (8%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +V++IQ +N +E +LG ASWH +Y D++Y+++G +P ++ E DLL VF+Q G
Sbjct: 1 MNKVRKIQQLNERELELGTPIKASWHYEYADTSYIFIGNLPPEMNEMDLLIVFSQYGVPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYED------QRNNLNGAQILG--RTIRVDHV 106
+ L+RDK TG+ R FAF+ YE +NLNG G +RVDHV
Sbjct: 61 HLKLMRDKSTGQSRRFAFLKYEQFESTILAVDNLNGYS-FGDEYVLRVDHV 110
>gi|344304766|gb|EGW34998.1| hypothetical protein SPAPADRAFT_58120 [Spathaspora passalidarum
NRRL Y-27907]
Length = 218
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 6/108 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ + +I IN KE S +SWH Y+D+ Y+Y+G IP LT D++ +F+Q G
Sbjct: 1 MNSIHKINQINQKELATNTSYKSSWHYDYRDTNYIYIGNIPSSLTAQDIVIIFSQYGIPT 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDH 105
+NLV+DK TG+ RGFAF+ Y + +N NG ++ R +RVDH
Sbjct: 61 HLNLVKDKTTGEHRGFAFLKYAHFKSCILAIDNFNGIKVGDRNLRVDH 108
>gi|344228131|gb|EGV60017.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 215
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ + RI IN +E D +SD ASWH YKDS Y+++GG+ L E DL+ +F+Q G
Sbjct: 10 MNSINRINQINQQELDANVSDSASWHNDYKDSNYIFIGGLNAQLKEKDLIVIFSQYGLPT 69
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDH 105
+ LV+D + +GF ++ Y+ + +NLNG + + IRVDH
Sbjct: 70 HIKLVKDSEKKENKGFGYLKYQQFQSCVLAVDNLNGVVVYDKKIRVDH 117
>gi|385303030|gb|EIF47131.1| rna binding domain-containing protein [Dekkera bruxellensis
AWRI1499]
Length = 215
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 73/115 (63%), Gaps = 8/115 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
++Q++ IQ +++ E + +ASWH Y D+A+V++G +P ++ E D+L +F+Q G
Sbjct: 1 MSQIQNIQKLSNAELEEATPFNASWHQDYNDTAWVFIGRLPPEMNEMDILIMFSQYGVPQ 60
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQIL-GRTIRVDHVAKYKK 111
+ L RD TG+ R FAF+ YED + +N NG +I+ G I+VDHV +YKK
Sbjct: 61 SLKLARDAETGESRRFAFLKYEDFKSAVLAVDNFNGYEIIPGSRIQVDHV-RYKK 114
>gi|68484767|ref|XP_713695.1| hypothetical protein CaO19.8647 [Candida albicans SC5314]
gi|68484858|ref|XP_713650.1| hypothetical protein CaO19.1045 [Candida albicans SC5314]
gi|46435157|gb|EAK94545.1| hypothetical protein CaO19.1045 [Candida albicans SC5314]
gi|46435204|gb|EAK94591.1| hypothetical protein CaO19.8647 [Candida albicans SC5314]
Length = 353
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +K+I IN KE + S +SWH Y+D+ Y+Y+G IP++LT DL+ +F+Q G
Sbjct: 94 MNTIKQINQINQKELNSQTSYKSSWHYDYRDTNYLYIGNIPYNLTTKDLIIIFSQYGIPT 153
Query: 64 DVNLVRDKGTGK-PRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+NL++DK + K RGF F+ Y + + +N NG ++ R ++VDH YK + +E+
Sbjct: 154 HINLIKDKESSKHHRGFGFLKYANFKSCILAIDNFNGIKLGDRYLKVDH-NYYKLRGDEN 212
Query: 117 EE 118
E+
Sbjct: 213 ED 214
>gi|238879122|gb|EEQ42760.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 258
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +K+I IN KE + S +SWH Y+D+ Y+Y+G IP++LT DL+ +F+Q G
Sbjct: 1 MNTIKQINQINQKELNSQTSYKSSWHYDYRDTNYLYIGNIPYNLTTKDLIIIFSQYGIPT 60
Query: 64 DVNLVRDKGTGK-PRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEED 116
+NL++DK + K RGF F+ Y + + +N NG ++ R ++VDH YK + +E+
Sbjct: 61 HINLIKDKESSKHHRGFGFLKYANFKSCILAIDNFNGIKLGDRYLKVDH-NYYKLRGDEN 119
Query: 117 EE 118
E+
Sbjct: 120 ED 121
>gi|66475752|ref|XP_627692.1| RNA-binding protein [Cryptosporidium parvum Iowa II]
gi|46229304|gb|EAK90153.1| RNA-binding protein, putative [Cryptosporidium parvum Iowa II]
Length = 153
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 58/85 (68%), Gaps = 6/85 (7%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR--- 88
YK+S+Y+Y+ G+ LTEGD+ +F+Q GE +D+NL+RDK G +G+ F+ YEDQ+
Sbjct: 1 YKNSSYIYISGLDLRLTEGDIAIIFSQWGEPIDINLIRDKKLGISKGYCFLCYEDQKSTI 60
Query: 89 ---NNLNGAQILGRTIRVDHVAKYK 110
+N N +LG+ I+VDHV YK
Sbjct: 61 LAVDNANDMILLGKHIKVDHVRDYK 85
>gi|154416000|ref|XP_001581023.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915247|gb|EAY20037.1| hypothetical protein TVAG_365450 [Trichomonas vaginalis G3]
Length = 156
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 7/108 (6%)
Query: 5 TQVKRIQHINSKEADLGISDD-ASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ K IQ + E G+ D+ +S+H +KD ++ V + ++L+EGD+L VF Q G I+
Sbjct: 3 IKAKNIQKLQEIELRKGVFDELSSFHGDFKDCPWIKVNNLNYELSEGDILTVFEQYGTII 62
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDH 105
+ L+RD TG RG A + YED R +NLNG +LGRTI VDH
Sbjct: 63 NFELIRDAKTGDSRGTAIMEYEDWRSTILAVDNLNGITLLGRTISVDH 110
>gi|403370596|gb|EJY85165.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 360
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 49/70 (70%), Gaps = 6/70 (8%)
Query: 47 LTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRT 100
+ EGD+ VF+Q GE+VD L RD+ TGK +GFAF+AYEDQ+ +NLNG + GR
Sbjct: 1 MNEGDIAIVFSQFGEVVDCRLARDQKTGKSKGFAFLAYEDQKSTVLAVDNLNGIDLCGRL 60
Query: 101 IRVDHVAKYK 110
I VDHV +YK
Sbjct: 61 ISVDHVMQYK 70
>gi|448518692|ref|XP_003867973.1| U2 snRNP protein [Candida orthopsilosis Co 90-125]
gi|380352312|emb|CCG22537.1| U2 snRNP protein [Candida orthopsilosis]
Length = 269
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 20/178 (11%)
Query: 4 LTQVKRIQHINSKE-ADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ ++K+I IN KE A S +SWH +Y+D+ Y+++ IP + DL+ +F+Q G
Sbjct: 1 MNKIKQINQINQKELASNTTSYKSSWHYEYRDTNYIFISNIPHSIKPHDLVIIFSQYGIP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDH-VAKYKKKEEE 115
+NLV++ TG RGFAF+ Y + + +N NG +I R + VDH K ++ E+E
Sbjct: 61 THLNLVKNHETGGHRGFAFLKYANFKSCILAIDNFNGIKIGDRMLHVDHSYYKLRRGEKE 120
Query: 116 DEE------TRQRM-----REERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQD 162
D+ R++M REE+ V + + GE + ++ + + G D
Sbjct: 121 DDYLIDYDGVRRQMEENSQREEKNV-KLIENGEESEPKAIEYKFKSEEKNESKGDEND 177
>gi|354543955|emb|CCE40677.1| hypothetical protein CPAR2_107120 [Candida parapsilosis]
Length = 273
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 73/122 (59%), Gaps = 8/122 (6%)
Query: 4 LTQVKRIQHINSKE-ADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ ++KRI IN KE A S +SWH +Y+D+ Y+++ IP + DL+ +F+Q G
Sbjct: 1 MNKIKRINQINQKELASSATSYKSSWHYEYRDTNYIFISNIPNFIKPHDLVVIFSQYGIP 60
Query: 63 VDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDH-VAKYKKKEEE 115
+NL+++ TG+ RGFAF+ Y + + +N NG ++ R + VDH K ++ E+E
Sbjct: 61 THLNLIKNHETGQHRGFAFLKYANFKSCVLAIDNFNGIKVGDRMLHVDHSYYKLRRGEKE 120
Query: 116 DE 117
D+
Sbjct: 121 DD 122
>gi|301106378|ref|XP_002902272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098892|gb|EEY56944.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 528
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ-----RNNLN 92
+YVG + +D+TE L VF +CG I V T + RGF +V + ++ L+
Sbjct: 121 IYVGNLAYDITEEVLRKVFDKCGSIRAVRFAEHIQTKEFRGFGYVQFHEEGPCEAAVKLD 180
Query: 93 GAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQ 151
G ++GR + +D+ A+ + + EE +++++ +GVC FQ+G+CTRGD CKF+H Q
Sbjct: 181 GMVVMGRPMSIDYGARDEGYAQAREELQKKLK--KGVCHKFQQGQCTRGDACKFAHVMQ 237
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNL 91
++D V+V G+P + + L F GE+ +V D+ TG+ RGF FV + + N L
Sbjct: 7 WRDRNKVFVAGLPVHVDDNALYEKFKPFGEMHQSKVVYDQKTGRSRGFGFVTFCEYTNAL 66
Query: 92 NGAQILGRT 100
+ L ++
Sbjct: 67 DAVDQLNQS 75
>gi|156340730|ref|XP_001620537.1| hypothetical protein NEMVEDRAFT_v1g147835 [Nematostella
vectensis]
gi|156205583|gb|EDO28437.1| predicted protein [Nematostella vectensis]
Length = 52
Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 45/52 (86%)
Query: 7 VKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
+K IQ +N + ++G++DDASWH +YKDSAYV++GG+P+DLTEGD+L VF+Q
Sbjct: 1 IKNIQKLNDRMLEMGVTDDASWHKQYKDSAYVFIGGLPYDLTEGDILCVFSQ 52
>gi|348680071|gb|EGZ19887.1| hypothetical protein PHYSODRAFT_489640 [Phytophthora sojae]
Length = 536
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ-----RNNLN 92
+YVG + +D+TE L VF +CG I V T + RGF +V + ++ L+
Sbjct: 118 IYVGNLAYDITEEVLRKVFDKCGSIRAVRFAEHIQTKEFRGFGYVQFHEEGPCEAAVKLD 177
Query: 93 GAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQ 151
G ++GR + +D+ A+ + + EE +++++ +G+C FQ+G+CTRGD CKF+H Q
Sbjct: 178 GMVVMGRPMNIDYGARDEGYAQAREELQKKLK--KGICHKFQQGQCTRGDACKFAHVMQ 234
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNL 91
++D V+V G+P + + L F GE+ +V D+ TG+ +GF FV + + N L
Sbjct: 7 WRDRNKVFVAGLPSHVDDDALYEKFKSFGEMHQSKVVYDQKTGRSKGFGFVTFCEYSNAL 66
Query: 92 NGAQILGRT 100
+ L ++
Sbjct: 67 DAVDQLNQS 75
>gi|167540183|ref|XP_001741597.1| U2 snRNP component IST3 [Entamoeba dispar SAW760]
gi|165893807|gb|EDR21934.1| U2 snRNP component IST3, putative [Entamoeba dispar SAW760]
Length = 135
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 64/104 (61%), Gaps = 6/104 (5%)
Query: 8 KRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNL 67
K I ++ ++ + + SWH KYK++ +Y+GGI +L EGD++ VF+Q GE++D+N+
Sbjct: 9 KNISKLSEQDLEYSCKYEDSWHYKYKNNNEIYIGGIANELNEGDIIIVFSQFGEVIDINM 68
Query: 68 VRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDH 105
+ + +GF F+ Y+D R +N NG ++ GR + VDH
Sbjct: 69 PWNNDEDEHKGFCFLKYKDPRSCVLAIDNFNGIELNGRRLTVDH 112
>gi|426259210|ref|XP_004023193.1| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Ovis aries]
Length = 304
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 54/79 (68%), Gaps = 11/79 (13%)
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYK--- 110
GEIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y+
Sbjct: 2 GEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRLPE 61
Query: 111 KKEEEDEETRQRMREERGV 129
EE DE TR+ +ERG
Sbjct: 62 DSEEMDEVTRE--LQERGC 78
>gi|148697139|gb|EDL29086.1| RNA binding motif protein, X-linked 2, isoform CRA_b [Mus musculus]
Length = 278
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 7/77 (9%)
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKE 113
GEIV++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y+ +
Sbjct: 12 GEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQ 71
Query: 114 E-EDEETRQRMREERGV 129
E ED + R +E+G
Sbjct: 72 ESEDVDDVTRELQEKGC 88
>gi|241948671|ref|XP_002417058.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223640396|emb|CAX44647.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 257
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 18/132 (13%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
+ +K+I IN KE S +SWH Y+D+ Y+Y+G IPF+LTE D++ +F+Q G
Sbjct: 1 MNTIKQINQINQKELISNTSYKSSWHYDYRDTNYLYIGNIPFNLTEKDIIKIFSQYGIPT 60
Query: 64 DVNLVRDKGTGKP-----------RGFAFVAYEDQR------NNLNGAQILGRTIRVDHV 106
+NL++DK K RGF F+ Y + + +N NG ++ R ++VDH
Sbjct: 61 HINLIKDKDKDKDKDKQETEKKYHRGFGFLKYSNFKSCILAIDNFNGIKLGDRYLKVDH- 119
Query: 107 AKYKKKEEEDEE 118
YK + +E+E+
Sbjct: 120 NYYKLRNDENED 131
>gi|351699029|gb|EHB01948.1| RNA-binding motif protein, X-linked 2 [Heterocephalus glaber]
Length = 270
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 6/64 (9%)
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKE 113
GE+V++NLVRDK TGK +GF F+ YEDQR +N NG +I GRTIRVDHV+ Y+ +
Sbjct: 4 GEVVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPK 63
Query: 114 EEDE 117
E DE
Sbjct: 64 ESDE 67
>gi|449499026|ref|XP_002194981.2| PREDICTED: brain mitochondrial carrier protein 1 [Taeniopygia
guttata]
Length = 349
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 7/76 (9%)
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NLNGAQILGRTIRVDHVAKYK-KK 112
GE+V++NLVRDK TGK +GF F+ YEDQR+ N NG +I GRTIRVDHVA Y+ K
Sbjct: 11 GEVVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYRPPK 70
Query: 113 EEEDEETRQRMREERG 128
E ED + R + +G
Sbjct: 71 ESEDWDDVTRALDAKG 86
>gi|291240642|ref|XP_002740229.1| PREDICTED: CG10466-like [Saccoglossus kowalevskii]
Length = 281
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 6/58 (10%)
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKK 111
GEI ++NLVRDK TGK +GF F+ YEDQR +N NG ++LGR +RVDHVA Y+K
Sbjct: 4 GEIANINLVRDKKTGKTKGFCFICYEDQRSTVLAVDNFNGTKLLGRILRVDHVADYRK 61
>gi|391347243|ref|XP_003747874.1| PREDICTED: cleavage stimulation factor subunit 2-like [Metaseiulus
occidentalis]
Length = 422
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN--- 89
K + V+VG IP+D TE L +F + G +V+ LV D+ TGKP+G+ F ++DQ
Sbjct: 15 KSACSVFVGNIPYDATEEQLKTIFEEVGPVVNFRLVYDRETGKPKGYGFCEFKDQETAMS 74
Query: 90 ---NLNGAQILGRTIRVDHVAKYKKKEE 114
NLN +I GR +RVDH A + KEE
Sbjct: 75 AMRNLNSFEIGGRALRVDHAASERNKEE 102
>gi|307215083|gb|EFN89890.1| RNA-binding motif protein, X-linked 2 [Harpegnathos saltator]
Length = 87
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 9/75 (12%)
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKE 113
GEIV++NL+RDK TGK +GF F+ YEDQR +N NG +ILGR IRVDHVA YK +
Sbjct: 7 GEIVNINLIRDKDTGKQKGFGFLCYEDQRSTILAVDNFNGIKILGRVIRVDHVANYKVPK 66
Query: 114 EE---DEETRQRMRE 125
+ DEETR+ +E
Sbjct: 67 DSKNIDEETRKLRKE 81
>gi|407033727|gb|EKE36960.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 112
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 54/81 (66%), Gaps = 6/81 (7%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
SWH KYKD+ +Y+GGI +L EGD++ VF+Q GE++D+N+ + + +GF F+ Y+D
Sbjct: 28 SWHYKYKDNNEIYIGGIASELNEGDMIIVFSQFGEVIDINMPWNNERDEHKGFCFLTYKD 87
Query: 87 QR------NNLNGAQILGRTI 101
R +N NG ++ GRT+
Sbjct: 88 PRSCVLAIDNFNGIELNGRTL 108
>gi|358419810|ref|XP_003584333.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Bos taurus]
Length = 287
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 11/87 (12%)
Query: 52 LLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNL------NGAQILGRTIRVDH 105
+L + + EIV++NLV DK TGK +GF F+ YEDQR+ + NG +I GRTIRVDH
Sbjct: 1 MLDLGLRYREIVNINLVPDKKTGKSKGFCFLCYEDQRSTILAVDSFNGIKIKGRTIRVDH 60
Query: 106 VAKYK---KKEEEDEETRQRMREERGV 129
V+ Y+ EE DE TR+ +ERG
Sbjct: 61 VSNYRLPEDSEEMDEVTRE--LQERGC 85
>gi|406607075|emb|CCH41590.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Wickerhamomyces ciferrii]
Length = 222
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 6/66 (9%)
Query: 47 LTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRT 100
+GD+L +F+Q G V + L+RDK TGK RGF ++ YEDQR +NLNGA++LGR
Sbjct: 9 FVKGDILIIFSQYGIPVHLKLIRDKETGKSRGFGYLKYEDQRSTILAVDNLNGAKVLGRI 68
Query: 101 IRVDHV 106
IRV+H
Sbjct: 69 IRVNHT 74
>gi|67481301|ref|XP_656000.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56473172|gb|EAL50615.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449703174|gb|EMD43668.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 112
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%), Gaps = 6/81 (7%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
SWH KYKD+ +Y+GGI +L EGD++ VF+Q GE++D+N+ + + +GF F+ Y+D
Sbjct: 28 SWHYKYKDNNEIYIGGIASELNEGDIIIVFSQFGEVIDINMPWNNERDEHKGFCFLTYKD 87
Query: 87 QR------NNLNGAQILGRTI 101
R +N NG ++ G+T+
Sbjct: 88 PRSCVLAIDNFNGIELNGKTL 108
>gi|321479154|gb|EFX90110.1| hypothetical protein DAPPUDRAFT_299933 [Daphnia pulex]
Length = 381
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+D+TE L +F++ G +V +V D+ TGKP+G+ F Y DQ NL
Sbjct: 16 VFVGNIPYDVTEEKLKDIFSEAGPVVSFKIVYDRETGKPKGYGFCEYRDQETALCAMRNL 75
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEETRQRMRE 125
NG +I GRT+RVD+ K + E +++ E
Sbjct: 76 NGYEIAGRTLRVDNACTEKSRLEMQSLMQEKTTE 109
>gi|358421036|ref|XP_001254105.2| PREDICTED: cleavage stimulation factor subunit 2-like [Bos taurus]
Length = 331
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|170583025|ref|XP_001896399.1| hypothetical protein Bm1_24695 [Brugia malayi]
gi|158596418|gb|EDP34761.1| hypothetical protein Bm1_24695 [Brugia malayi]
Length = 60
Score = 73.6 bits (179), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 1 MNPLTQVKRIQHINSKEADLGI--SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQ 58
MNPLT ++ IN +E LG S+ SWH KY DSA++Y+GG+P+DL EGD++AVF+Q
Sbjct: 1 MNPLTNIRNQNKINDRELLLGFTGSNSKSWHQKYSDSAWIYIGGLPYDLNEGDVIAVFSQ 60
>gi|126342916|ref|XP_001364467.1| PREDICTED: cleavage stimulation factor subunit 2-like [Monodelphis
domestica]
Length = 551
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|440290535|gb|ELP83929.1| U2 snRNP component IST3, putative [Entamoeba invadens IP1]
Length = 135
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 65/104 (62%), Gaps = 6/104 (5%)
Query: 8 KRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNL 67
+ IQ ++ ++ + + ++SWH +YK++ +Y+GGI +L EGD++ VF+Q GE++D+++
Sbjct: 9 QNIQRLSEQDLEFSSTYESSWHYRYKENREIYIGGIAPELNEGDIIVVFSQYGEVIDIHM 68
Query: 68 VRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDH 105
D + +GF + Y++ + +NLNG + + + VDH
Sbjct: 69 PWDSEGDRHKGFCLLTYKNPKSCVLAVDNLNGIVLNEKMLIVDH 112
>gi|417403608|gb|JAA48603.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 647
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit [Xenopus laevis]
Length = 497
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|26351239|dbj|BAC39256.1| unnamed protein product [Mus musculus]
Length = 642
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|440901693|gb|ELR52585.1| Cleavage stimulation factor subunit 2 [Bos grunniens mutus]
Length = 619
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|344296752|ref|XP_003420068.1| PREDICTED: cleavage stimulation factor subunit 2-like [Loxodonta
africana]
Length = 582
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|27807239|ref|NP_777110.1| cleavage stimulation factor subunit 2 [Bos taurus]
gi|71153228|sp|Q8HXM1.1|CSTF2_BOVIN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|24416593|gb|AAN05427.1| CstF-64 [Bos taurus]
gi|296470997|tpg|DAA13112.1| TPA: cleavage stimulation factor 64 kDa subunit [Bos taurus]
Length = 572
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|395850631|ref|XP_003797883.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Otolemur garnettii]
Length = 576
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|426252723|ref|XP_004020052.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Ovis aries]
Length = 572
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|426257829|ref|XP_004022524.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Ovis
aries]
Length = 572
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|348570430|ref|XP_003471000.1| PREDICTED: cleavage stimulation factor subunit 2-like [Cavia
porcellus]
Length = 577
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|426257831|ref|XP_004022525.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Ovis
aries]
Length = 592
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|47225344|emb|CAG09844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 570
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 28 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 87
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 88 NGREFSGRALRVDNAASEKNKEE 110
>gi|325185008|emb|CCA19499.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 430
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 17/140 (12%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN--- 89
K+ +YVG + +++TE + VF+ G+I V L + T K RGF +V + D +
Sbjct: 115 KNCTTLYVGNLSYEITEDIIRRVFSPFGDIKAVRLAQHIQTKKFRGFGYVQFYDTESCTK 174
Query: 90 --NLNGAQILGRTIRVDHV----AKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDG 143
NG ++GR + VD A K+K EE E + ++G+C FQ C GD
Sbjct: 175 ALATNGKIVIGRPMHVDLSGEDDASIKQKREEMER-----KLKKGICNRFQSNSCLHGDA 229
Query: 144 CKFSH---NEQRAANTGGGP 160
CKF+H N++ +A T P
Sbjct: 230 CKFAHVQKNQKESATTSVEP 249
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY------E 85
++D V+V G+P D+ + L F G++ +V D TG+ +GF F+ Y
Sbjct: 7 WRDRNKVFVAGLPRDVDDDALYNKFRAFGDMFQAKVVFDAATGRSKGFGFLTYRQYDHAM 66
Query: 86 DQRNNLNGAQILGRTIRV 103
D + NG GR + V
Sbjct: 67 DAIDKTNGKNWNGRVLNV 84
>gi|149244636|ref|XP_001526861.1| hypothetical protein LELG_01689 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449255|gb|EDK43511.1| hypothetical protein LELG_01689 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 414
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 23/121 (19%)
Query: 4 LTQVKRIQHINSKE-ADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
+ ++++I IN KE A + +SWH Y+D+ YVY+G IP+ +T DLL +F+Q G
Sbjct: 1 MNKIRQINQINQKELASKSTTYKSSWHYDYRDTNYVYIGNIPYSITRNDLLVMFSQYGIP 60
Query: 63 VDVNLVRDKGT----------------GKPRGFAFVAYEDQR------NNLNGAQILGRT 100
+NL D T K RGFAF+ Y + + +N NG ++ G
Sbjct: 61 THINLPLDTRTDNYNDGNDGKDEKNIAPKHRGFAFLKYANFKSCILAIDNFNGVKVGGAN 120
Query: 101 I 101
+
Sbjct: 121 V 121
>gi|311276614|ref|XP_003135279.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Sus scrofa]
Length = 572
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kD, partial [Homo sapiens]
Length = 559
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 76
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 77 NGREFSGRALRVDNAASEKNKEE 99
>gi|395850633|ref|XP_003797884.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Otolemur garnettii]
Length = 596
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|194373969|dbj|BAG62297.1| unnamed protein product [Homo sapiens]
Length = 553
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|119224067|gb|AAI26544.1| CSTF2 protein [Bos taurus]
Length = 592
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit 2 [Homo sapiens]
gi|332861154|ref|XP_003317595.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
troglodytes]
gi|397478196|ref|XP_003810439.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
paniscus]
gi|426396653|ref|XP_004064546.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Gorilla
gorilla gorilla]
gi|461847|sp|P33240.1|CSTF2_HUMAN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|181139|gb|AAA35724.1| cleavage stimulation factor [Homo sapiens]
gi|17389334|gb|AAH17712.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|32879899|gb|AAP88780.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|61359609|gb|AAX41742.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|61359616|gb|AAX41743.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|119623223|gb|EAX02818.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, isoform
CRA_a [Homo sapiens]
gi|123981258|gb|ABM82458.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|123996091|gb|ABM85647.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|261860120|dbj|BAI46582.1| Cleavage stimulation factor 64 kDa subunit [synthetic construct]
gi|410256936|gb|JAA16435.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
gi|410289934|gb|JAA23567.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|291408103|ref|XP_002720432.1| PREDICTED: cleavage stimulation factor subunit 2 [Oryctolagus
cuniculus]
Length = 576
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|402910773|ref|XP_003918026.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Papio
anubis]
gi|402910775|ref|XP_003918027.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Papio
anubis]
Length = 577
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|444518829|gb|ELV12414.1| Cleavage stimulation factor subunit 2 [Tupaia chinensis]
Length = 409
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|335306285|ref|XP_003360436.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Sus scrofa]
Length = 592
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|449498377|ref|XP_002191180.2| PREDICTED: cleavage stimulation factor subunit 2 [Taeniopygia
guttata]
Length = 575
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|410353769|gb|JAA43488.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|431895723|gb|ELK05144.1| Cleavage stimulation factor 64 kDa subunit [Pteropus alecto]
Length = 577
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|88682979|gb|AAI05553.1| CSTF2 protein [Bos taurus]
Length = 632
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|74007924|ref|XP_861405.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 5 [Canis
lupus familiaris]
Length = 577
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|296235968|ref|XP_002763125.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Callithrix jacchus]
Length = 597
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|301788318|ref|XP_002929575.1| PREDICTED: cleavage stimulation factor subunit 2-like [Ailuropoda
melanoleuca]
Length = 582
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|426223062|ref|XP_004005698.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ovis aries]
Length = 607
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|74007936|ref|XP_549135.2| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Canis
lupus familiaris]
Length = 597
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|403298766|ref|XP_003940178.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 597
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|380798899|gb|AFE71325.1| cleavage stimulation factor subunit 2, partial [Macaca mulatta]
Length = 575
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 16 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 75
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 76 NGREFSGRALRVDNAASEKNKEE 98
>gi|301788792|ref|XP_002929813.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ailuropoda melanoleuca]
Length = 552
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|426252725|ref|XP_004020053.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Ovis aries]
Length = 612
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|390480015|ref|XP_003735829.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|332861156|ref|XP_529072.3| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
troglodytes]
gi|397478198|ref|XP_003810440.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
paniscus]
gi|426396655|ref|XP_004064547.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 597
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|426252727|ref|XP_004020054.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 3 [Ovis aries]
Length = 623
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|410988989|ref|XP_004000752.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
2 [Felis catus]
Length = 577
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|403298762|ref|XP_003940176.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403298764|ref|XP_003940177.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|332254742|ref|XP_003276491.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Nomascus leucogenys]
Length = 577
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|192764314|gb|ACF05701.1| alphaCstF-64 variant 4 [Mus musculus]
Length = 554
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|34810648|pdb|1P1T|A Chain A, Nmr Structure Of The N-Terminal Rrm Domain Of Cleavage
Stimulation Factor 64 Kda Subunit
Length = 104
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 11 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 70
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 71 NGREFSGRALRVDNAASEKNKEE 93
>gi|332212188|ref|XP_003255200.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Nomascus leucogenys]
Length = 622
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|297304342|ref|XP_001089558.2| PREDICTED: cleavage stimulation factor subunit 2-like [Macaca
mulatta]
gi|402910777|ref|XP_003918028.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Papio
anubis]
gi|355704983|gb|EHH30908.1| hypothetical protein EGK_20728 [Macaca mulatta]
gi|355757534|gb|EHH61059.1| hypothetical protein EGM_18986 [Macaca fascicularis]
Length = 597
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|196115100|ref|NP_001124486.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Rattus
norvegicus]
gi|195539770|gb|AAI68251.1| Cstf2 protein [Rattus norvegicus]
Length = 575
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|197100099|ref|NP_001125111.1| cleavage stimulation factor subunit 2 [Pongo abelii]
gi|71153230|sp|Q5RDA3.1|CSTF2_PONAB RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|55726993|emb|CAH90254.1| hypothetical protein [Pongo abelii]
Length = 577
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|336088638|ref|NP_001229511.1| cleavage stimulation factor subunit 2 tau variant [Bos taurus]
gi|296472872|tpg|DAA14987.1| TPA: CSTF2 protein-like [Bos taurus]
Length = 642
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|426252729|ref|XP_004020055.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Ovis aries]
Length = 646
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|192764310|gb|ACF05699.1| betaCstF-64 variant 2 [Homo sapiens]
Length = 597
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|18875338|ref|NP_573459.1| cleavage stimulation factor subunit 2 [Mus musculus]
gi|71153229|sp|Q8BIQ5.2|CSTF2_MOUSE RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|11139720|gb|AAG31814.1|AF317552_1 polyadenylation protein CSTF64 [Mus musculus]
gi|26353226|dbj|BAC40243.1| unnamed protein product [Mus musculus]
Length = 580
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|332254744|ref|XP_003276492.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Nomascus leucogenys]
Length = 597
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|355681345|gb|AER96778.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Mustela
putorius furo]
Length = 582
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|157821159|ref|NP_001101056.1| cleavage stimulation factor subunit 2 tau variant [Rattus
norvegicus]
gi|149062701|gb|EDM13124.1| rCG47773 [Rattus norvegicus]
Length = 629
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|22478042|gb|AAH36719.1| Cstf2 protein [Mus musculus]
Length = 510
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus]
Length = 580
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|197246895|gb|AAI69065.1| Cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Rattus
norvegicus]
Length = 629
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|260790683|ref|XP_002590371.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
gi|229275563|gb|EEN46382.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
Length = 222
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 20 VFVGNIPYEATEEQLKDIFSEVGPVISFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 79
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEET 119
NG ++ GR +RVD+ A K KEE + T
Sbjct: 80 NGHELNGRQLRVDNAASEKSKEELKQLT 107
>gi|351709510|gb|EHB12429.1| Cleavage stimulation factor 64 kDa subunit [Heterocephalus glaber]
Length = 597
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|410043862|ref|XP_003951699.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
troglodytes]
Length = 576
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|20072518|gb|AAH26995.1| Cstf2t protein [Mus musculus]
Length = 637
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|344275007|ref|XP_003409305.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Loxodonta africana]
Length = 609
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|148277061|ref|NP_112539.2| cleavage stimulation factor subunit 2 tau variant [Mus musculus]
gi|71153235|sp|Q8C7E9.2|CSTFT_MOUSE RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculus]
gi|26350087|dbj|BAC38683.1| unnamed protein product [Mus musculus]
Length = 632
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus]
Length = 632
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|50510589|dbj|BAD32280.1| mKIAA0689 protein [Mus musculus]
Length = 643
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 29 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 88
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 89 NGREFSGRALRVDNAASEKNKEE 111
>gi|192764316|gb|ACF05702.1| betaCstF-64 variant 1 [Mus musculus]
Length = 604
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|148709763|gb|EDL41709.1| cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Mus
musculus]
Length = 644
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 30 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 89
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 90 NGREFSGRALRVDNAASEKNKEE 112
>gi|194042423|ref|XP_001926989.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Sus scrofa]
Length = 615
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|192764312|gb|ACF05700.1| betaCstF-64 variant 3 [Mus musculus]
Length = 630
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|410927616|ref|XP_003977237.1| PREDICTED: cleavage stimulation factor subunit 2-like [Takifugu
rubripes]
Length = 497
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 91 NGREFSGRALRVDNAASEKNKEE 113
>gi|354476121|ref|XP_003500273.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Cricetulus griseus]
Length = 614
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|444707906|gb|ELW49054.1| Cleavage stimulation factor subunit 2 tau variant [Tupaia
chinensis]
Length = 654
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|354476123|ref|XP_003500274.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Cricetulus griseus]
Length = 623
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|194205912|ref|XP_001917732.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Equus caballus]
Length = 619
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|57530169|ref|NP_001006433.1| cleavage stimulation factor subunit 2 [Gallus gallus]
gi|53128673|emb|CAG31323.1| hypothetical protein RCJMB04_5b8 [Gallus gallus]
Length = 475
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|195497709|ref|XP_002096214.1| GE25546 [Drosophila yakuba]
gi|194182315|gb|EDW95926.1| GE25546 [Drosophila yakuba]
Length = 414
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|147898871|ref|NP_001080179.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
laevis]
gi|27735464|gb|AAH41291.1| Cstf-64 protein [Xenopus laevis]
Length = 518
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|395820735|ref|XP_003783716.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Otolemur garnettii]
Length = 601
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|351715564|gb|EHB18483.1| Cleavage stimulation factor 64 kDa subunit, tau variant
[Heterocephalus glaber]
Length = 642
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|194332803|ref|NP_001123707.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
(Silurana) tropicalis]
gi|189442601|gb|AAI67314.1| LOC100170457 protein [Xenopus (Silurana) tropicalis]
Length = 498
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|11762098|gb|AAG40327.1|AF322194_1 variant polyadenylation protein CSTF-64 [Mus musculus]
Length = 630
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|344241215|gb|EGV97318.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Cricetulus
griseus]
Length = 645
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|431839028|gb|ELK00957.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Pteropus
alecto]
Length = 601
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|51258747|gb|AAH80037.1| Cstf-64-prov protein [Xenopus laevis]
Length = 498
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|62896707|dbj|BAD96294.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant variant [Homo sapiens]
Length = 616
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|388452994|ref|NP_001253727.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|355758732|gb|EHH61510.1| hypothetical protein EGM_21244 [Macaca fascicularis]
gi|383416951|gb|AFH31689.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|384946038|gb|AFI36624.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|387541538|gb|AFJ71396.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
Length = 620
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|417412278|gb|JAA52529.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Desmodus rotundus]
Length = 678
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 52 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 111
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 112 NGREFSGRALRVDNAASEKNKEE 134
>gi|348576422|ref|XP_003473986.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Cavia porcellus]
Length = 630
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|125774537|ref|XP_001358527.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
gi|54638266|gb|EAL27668.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|194900156|ref|XP_001979623.1| GG22991 [Drosophila erecta]
gi|190651326|gb|EDV48581.1| GG22991 [Drosophila erecta]
Length = 416
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|402880821|ref|XP_003903988.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Papio
anubis]
Length = 620
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|291404363|ref|XP_002718535.1| PREDICTED: cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kDa, tau variant [Oryctolagus cuniculus]
Length = 601
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|355562595|gb|EHH19189.1| hypothetical protein EGK_19854 [Macaca mulatta]
Length = 610
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 8 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 67
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 68 NGREFSGRALRVDNAASEKNKEE 90
>gi|410974961|ref|XP_003993907.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Felis
catus]
Length = 613
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|195569859|ref|XP_002102926.1| GD19237 [Drosophila simulans]
gi|194198853|gb|EDX12429.1| GD19237 [Drosophila simulans]
Length = 419
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|195343246|ref|XP_002038209.1| GM17877 [Drosophila sechellia]
gi|194133059|gb|EDW54627.1| GM17877 [Drosophila sechellia]
Length = 419
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|348515337|ref|XP_003445196.1| PREDICTED: cleavage stimulation factor subunit 2-like [Oreochromis
niloticus]
Length = 478
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 91 NGREFSGRALRVDNAASEKNKEE 113
>gi|281348298|gb|EFB23882.1| hypothetical protein PANDA_020101 [Ailuropoda melanoleuca]
Length = 612
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|189218303|ref|YP_001938945.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
gi|189185161|gb|ACD82346.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
Length = 143
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 17 EADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKP 76
+ADL + + + +YVG +PF ++E DL +F Q G++ ++NL+ DK TG+
Sbjct: 28 DADLRFELMLKEMSVFMNRTRLYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQS 87
Query: 77 RGFAFVAYEDQR------NNLNGAQILGRTIRVD 104
RGFAFV E + NNLNG+ + GR I V+
Sbjct: 88 RGFAFVTMESSQAAQSAINNLNGSSVSGRQIVVN 121
>gi|195145742|ref|XP_002013849.1| GL24357 [Drosophila persimilis]
gi|194102792|gb|EDW24835.1| GL24357 [Drosophila persimilis]
Length = 418
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|325463311|gb|ADZ15426.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [synthetic construct]
Length = 616
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|14149675|ref|NP_056050.1| cleavage stimulation factor subunit 2 tau variant [Homo sapiens]
gi|71153234|sp|Q9H0L4.1|CSTFT_HUMAN RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|12053011|emb|CAB66681.1| hypothetical protein [Homo sapiens]
gi|24416591|gb|AAN05429.1| tCstF-64 [Homo sapiens]
gi|119574527|gb|EAW54142.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|189067256|dbj|BAG36966.1| unnamed protein product [Homo sapiens]
Length = 616
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|397469483|ref|XP_003806381.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
paniscus]
Length = 615
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|28557621|gb|AAO45216.1| RE27227p [Drosophila melanogaster]
Length = 437
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|432111364|gb|ELK34639.1| Cleavage stimulation factor subunit 2 tau variant [Myotis davidii]
Length = 641
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|410043860|ref|XP_001163035.2| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Pan troglodytes]
gi|410335357|gb|JAA36625.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335359|gb|JAA36626.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335361|gb|JAA36627.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335363|gb|JAA36628.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
Length = 615
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|149055454|gb|EDM07038.1| rCG38164 [Rattus norvegicus]
Length = 363
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|426364779|ref|XP_004049473.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
gi|426364781|ref|XP_004049474.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
Length = 617
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|195452858|ref|XP_002073531.1| GK14167 [Drosophila willistoni]
gi|194169616|gb|EDW84517.1| GK14167 [Drosophila willistoni]
Length = 401
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ NL
Sbjct: 19 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 78
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|194743216|ref|XP_001954096.1| GF16912 [Drosophila ananassae]
gi|190627133|gb|EDV42657.1| GF16912 [Drosophila ananassae]
Length = 415
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|17137710|ref|NP_477453.1| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|5713194|gb|AAD47839.1|AF170082_1 cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|23171661|gb|AAF55577.2| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|205360993|gb|ACI03573.1| FI01908p [Drosophila melanogaster]
Length = 419
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|66516308|ref|XP_623321.1| PREDICTED: cleavage stimulation factor subunit 2 [Apis mellifera]
Length = 441
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|380028061|ref|XP_003697730.1| PREDICTED: cleavage stimulation factor subunit 2-like [Apis florea]
Length = 441
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|403260042|ref|XP_003922497.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Saimiri boliviensis boliviensis]
Length = 621
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|432877328|ref|XP_004073146.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 1 [Oryzias latipes]
Length = 494
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 91 NGREFSGRALRVDNAASEKNKEE 113
>gi|332026262|gb|EGI66401.1| Cleavage stimulation factor 64 kDa subunit [Acromyrmex echinatior]
Length = 480
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|297686917|ref|XP_002820977.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pongo
abelii]
Length = 625
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|195037535|ref|XP_001990216.1| GH18352 [Drosophila grimshawi]
gi|193894412|gb|EDV93278.1| GH18352 [Drosophila grimshawi]
Length = 430
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|242018247|ref|XP_002429590.1| A-kinase anchor protein, putative [Pediculus humanus corporis]
gi|212514557|gb|EEB16852.1| A-kinase anchor protein, putative [Pediculus humanus corporis]
Length = 408
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 20/119 (16%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IPFDLTE L +F++ G ++ LV D+ GKP+G+ F Y+D NL
Sbjct: 16 VFVGNIPFDLTEEKLKEIFSEVGPVLSFKLVYDRENGKPKGYGFCEYKDIETANSAMRNL 75
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNE 150
NG +I GR ++VD+ A +E+TR M+ Q E + F H E
Sbjct: 76 NGFEIGGRVLKVDNAA--------NEKTRMEMQ------NMIQANEPIQNSDNNFEHVE 120
>gi|326673799|ref|XP_003199996.1| PREDICTED: cleavage stimulation factor subunit 2-like [Danio rerio]
Length = 488
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 26 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 85
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 86 NGREFSGRALRVDNAASEKNKEE 108
>gi|195108753|ref|XP_001998957.1| GI23336 [Drosophila mojavensis]
gi|193915551|gb|EDW14418.1| GI23336 [Drosophila mojavensis]
Length = 428
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|432877330|ref|XP_004073147.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 2 [Oryzias latipes]
Length = 479
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 91 NGREFSGRALRVDNAASEKNKEE 113
>gi|322788027|gb|EFZ13868.1| hypothetical protein SINV_14012 [Solenopsis invicta]
Length = 291
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|308803152|ref|XP_003078889.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
gi|116057342|emb|CAL51769.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
Length = 269
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN---LNGA 94
V V + +D E D+ FA G I+DV + +D+ TG+PRG AFV Y Q ++G
Sbjct: 46 VLVRNLSWDAREDDVRDRFAGYGNILDVYMPKDRETGRPRGLAFVKYATQSEADAAVDGG 105
Query: 95 --QILGRTIRVDHVAKYKKKEEEDEETRQRMRE------ERGVCRAFQRGECTRGDGCKF 146
LGR IR + + +K +E QR + RG+C ++ G+C RGD C+F
Sbjct: 106 VGDFLGREIRCEIATQQRKSRDEMRSGSQRRDDRPYAPRSRGMCYDWKAGKCDRGDSCRF 165
Query: 147 SHNE 150
+H+E
Sbjct: 166 AHSE 169
>gi|76253771|ref|NP_956408.2| cleavage stimulation factor subunit 2 [Danio rerio]
gi|41107668|gb|AAH65442.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2 [Danio rerio]
Length = 488
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 26 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 85
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 86 NGREFSGRALRVDNAASEKNKEE 108
>gi|307202383|gb|EFN81811.1| Cleavage stimulation factor 64 kDa subunit [Harpegnathos saltator]
Length = 439
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|148688462|gb|EDL20409.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Mus musculus]
Length = 363
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|193598819|ref|XP_001951232.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Acyrthosiphon pisum]
gi|328706164|ref|XP_003243012.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Acyrthosiphon pisum]
Length = 386
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 14 VFVGNIPYEATEEKLKDIFSEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMRNL 73
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 74 NGYEIGGRTLRVDNACTEKSRLE 96
>gi|307190798|gb|EFN74667.1| RNA-binding motif protein, X-linked 2 [Camponotus floridanus]
Length = 88
Score = 71.2 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 9/75 (12%)
Query: 60 GEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNLNGAQILGRTIRVDHVAKYKKKE 113
GE+V++NL+RDK TGK +G+ F+ YEDQR +N NG +ILGR IRVDHV YK +
Sbjct: 7 GEVVNINLIRDKDTGKQKGYGFLCYEDQRSTILAVDNFNGIKILGRVIRVDHVTNYKAPK 66
Query: 114 EE---DEETRQRMRE 125
+ DEET + +E
Sbjct: 67 DSKNVDEETNKLRKE 81
>gi|345496803|ref|XP_003427819.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Nasonia vitripennis]
Length = 425
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|307172466|gb|EFN63915.1| Cleavage stimulation factor 64 kDa subunit [Camponotus floridanus]
Length = 438
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|195395200|ref|XP_002056224.1| GJ10336 [Drosophila virilis]
gi|194142933|gb|EDW59336.1| GJ10336 [Drosophila virilis]
Length = 427
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+GF F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIGGRTLRVDNACTEKSRME 100
>gi|350401751|ref|XP_003486249.1| PREDICTED: cleavage stimulation factor subunit 2-like [Bombus
impatiens]
Length = 441
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|156553552|ref|XP_001601896.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Nasonia vitripennis]
Length = 434
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|299472383|emb|CBN77571.1| similar to CG7697-PA [Ectocarpus siliculosus]
Length = 1264
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IPF TE L +F++ G IV + LV D TGKP+GFAFV YED NL
Sbjct: 11 VFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNL 70
Query: 92 NGAQILGRTIRVDHV--AKYKKKEEEDEETRQRMREERGV 129
NG GR +RV+ + +++ E+ Q+ R +GV
Sbjct: 71 NGYDCNGRLLRVNFSNNSSLGAEQQRGEKAPQQERTVKGV 110
>gi|193671655|ref|XP_001946102.1| PREDICTED: cleavage stimulation factor subunit 2-like
[Acyrthosiphon pisum]
Length = 388
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F + G ++ LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 14 VFVGNIPYEATEEKLKDIFNEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMRNL 73
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 74 NGYEIGGRTLRVDNACTEKSRLE 96
>gi|383860217|ref|XP_003705587.1| PREDICTED: cleavage stimulation factor subunit 2-like [Megachile
rotundata]
Length = 441
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE +L +F++ G ++ LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 79 NGYEIGGRTLRVDNACTEKSRME 101
>gi|291228918|ref|XP_002734426.1| PREDICTED: cleavage stimulation factor subunit 2-like [Saccoglossus
kowalevskii]
Length = 220
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 76
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
+G ++ GR +RVD+ A K KEE
Sbjct: 77 SGYELNGRQLRVDNAASEKNKEE 99
>gi|241997552|ref|XP_002433425.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215490848|gb|EEC00489.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 466
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
N + GR +RVD+ A K KEE
Sbjct: 78 NAFDLNGRPLRVDNAASEKSKEE 100
>gi|338729372|ref|XP_001492640.3| PREDICTED: cleavage stimulation factor subunit 2 [Equus caballus]
Length = 601
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVD----VNLVRDKGTGKPRGFAFVAYEDQRN---- 89
V+VG IP++ TE L VF++ G +V + LV D+ TGKP+G+ F Y+DQ
Sbjct: 18 VFVGNIPYEATEEQLKDVFSEVGPVVSSGRVIRLVYDRETGKPKGYGFCEYQDQETALSA 77
Query: 90 --NLNGAQILGRTIRVDHVAKYKKKEE 114
NLNG + GR +RVD+ A K KEE
Sbjct: 78 MRNLNGREFSGRALRVDNAASEKNKEE 104
>gi|354474899|ref|XP_003499667.1| PREDICTED: cleavage stimulation factor subunit 2 [Cricetulus
griseus]
gi|344238061|gb|EGV94164.1| Cleavage stimulation factor 64 kDa subunit [Cricetulus griseus]
Length = 558
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VCVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ A K KEE
Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>gi|395547925|ref|XP_003775192.1| PREDICTED: cleavage stimulation factor subunit 2 [Sarcophilus
harrisii]
Length = 556
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 40 VGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NLNG 93
VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NLNG
Sbjct: 5 VGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 64
Query: 94 AQILGRTIRVDHVAKYKKKEE 114
+ GR +RVD+ A K KEE
Sbjct: 65 REFSGRALRVDNAASEKNKEE 85
>gi|102269210|gb|ABF55966.2| cleavage stimulation factor 64-kDa subunit [Bombyx mori]
Length = 326
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 20 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 79
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GR++RVD+ K + E
Sbjct: 80 NGYEIGGRSLRVDNACTEKSRME 102
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD TE L FA+ G I V+++RDK TG+ RGF FV Y+ D + +
Sbjct: 7 LFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDGM 66
Query: 92 NGAQILGRTIRVD 104
NG + GRTIRVD
Sbjct: 67 NGKSVDGRTIRVD 79
>gi|345328415|ref|XP_001513073.2| PREDICTED: cleavage stimulation factor subunit 2-like
[Ornithorhynchus anatinus]
Length = 1036
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 40 VGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NLNG 93
+G IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NLNG
Sbjct: 456 LGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 515
Query: 94 AQILGRTIRVDHVAKYKKKEE 114
+ GR +RVD+ A K KEE
Sbjct: 516 REFSGRALRVDNAASEKNKEE 536
>gi|281354415|gb|EFB29999.1| hypothetical protein PANDA_019778 [Ailuropoda melanoleuca]
Length = 568
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 39 YVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NLN 92
VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NLN
Sbjct: 5 IVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 64
Query: 93 GAQILGRTIRVDHVAKYKKKEE 114
G + GR +RVD+ A K KEE
Sbjct: 65 GREFSGRALRVDNAASEKNKEE 86
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD TE L FA+ G I V+++RDK TG+ RGF FV Y+ D
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHV 106
+NG + GRTIRVD
Sbjct: 63 LEGMNGKSVDGRTIRVDEA 81
>gi|427798067|gb|JAA64485.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Rhipicephalus pulchellus]
Length = 377
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
N + GR +RVD+ A K KEE
Sbjct: 78 NAFDLNGRPLRVDNAASEKSKEE 100
>gi|449665135|ref|XP_002159315.2| PREDICTED: cleavage stimulation factor subunit 2-like [Hydra
magnipapillata]
Length = 413
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 21 GISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFA 80
+ D A K + V+VG IP++ ++ L +F+Q G ++ LV D+ TGKP+G+
Sbjct: 11 AVKDQQMKEAAEKSARSVFVGNIPYEASDDQLKDIFSQAGPVLSFRLVYDRETGKPKGYG 70
Query: 81 FVAYEDQRN------NLNGAQILGRTIRVDHVAKYKKKEEEDEET 119
F Y+D NLNG +I GR +RVD A K ED +
Sbjct: 71 FCEYKDSETAQSAMRNLNGTEIHGRQLRVDSAASQKGNGVEDPKA 115
>gi|126656762|ref|ZP_01727976.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126621982|gb|EAZ92690.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 83
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
+YVG +P+++TE DL VF+ G + V++ D+ TG+PRGFAFV E + N L
Sbjct: 3 IYVGNLPYEVTEADLNFVFSDYGSVKRVHVPTDRDTGRPRGFAFVELETKANEFNAIETL 62
Query: 92 NGAQILGRTIRVD 104
NGA+ +GRT++VD
Sbjct: 63 NGAEWMGRTMKVD 75
>gi|198418855|ref|XP_002123179.1| PREDICTED: similar to cleavage stimulation factor, 3 pre-RNA,
subunit 2, 64kDa [Ciona intestinalis]
Length = 455
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F + G ++ LV D+ +GKP+G+ F Y+D+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFNEVGNVISFRLVFDRESGKPKGYGFAEYQDKETALSSMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEEE 115
NG ++ GR +RVDH + + +E
Sbjct: 78 NGRELHGRPLRVDHATSERNRNDE 101
>gi|348667221|gb|EGZ07047.1| hypothetical protein PHYSODRAFT_251824 [Phytophthora sojae]
Length = 419
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+D+TE L +F++ G +V+ LV D+ TGKP+G+ F Y D NL
Sbjct: 15 VFVGNIPYDVTEDMLKEIFSEAGSVVNFRLVTDRETGKPKGYGFCEYADGATALSAMRNL 74
Query: 92 NGAQILGRTIRVD 104
NG +I GR +RVD
Sbjct: 75 NGYEINGRNLRVD 87
>gi|452824419|gb|EME31422.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 148
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 6/84 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VGG+P+ ++E DL VF++ GE+VD +V D+ TG+ RGF F++Y + + L
Sbjct: 7 VFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDECIAAL 66
Query: 92 NGAQILGRTIRVDHVAKYKKKEEE 115
+G + GRTIRV+ +++++E
Sbjct: 67 DGQDLQGRTIRVNKAMTREQRDDE 90
>gi|157137809|ref|XP_001664044.1| RNA-binding protein [Aedes aegypti]
gi|108869641|gb|EAT33866.1| AAEL013869-PA [Aedes aegypti]
Length = 399
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F + G ++ + LV D+ +GKP+G+ F Y+DQ NL
Sbjct: 16 VFVGNIPYEATEEKLKDIFCEVGPVISLKLVFDRESGKPKGYGFCEYKDQETALSAMRNL 75
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GR +RVD+ K + E
Sbjct: 76 NGYEIGGRALRVDNACTEKSRME 98
>gi|170054071|ref|XP_001862961.1| cleavage stimulation factor 64 kDa subunit [Culex quinquefasciatus]
gi|167874431|gb|EDS37814.1| cleavage stimulation factor 64 kDa subunit [Culex quinquefasciatus]
Length = 400
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ + LV D+ +GKP+G+ F Y+DQ NL
Sbjct: 17 VFVGNIPYEATEEKLKDIFSEVGPVISLKLVFDRESGKPKGYGFCEYKDQETALSAMRNL 76
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GR +RVD+ K + E
Sbjct: 77 NGYEIGGRALRVDNACTEKSRME 99
>gi|374299476|ref|YP_005051115.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str. Walvis
Bay]
gi|332552412|gb|EGJ49456.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str. Walvis
Bay]
Length = 104
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN----LNG 93
+Y+G +PF TEGDL +FAQ G + VN++ D+ TG+PRGFAFV E + L+G
Sbjct: 5 LYIGNLPFSATEGDLRTMFAQFGAVTRVNMITDRETGRPRGFAFVEIEGDVDGIIRALDG 64
Query: 94 AQILGRTIRVD 104
++ GR ++V+
Sbjct: 65 YRMSGRVLKVN 75
>gi|270000744|gb|EEZ97191.1| hypothetical protein TcasGA2_TC004378 [Tribolium castaneum]
Length = 409
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F + G+++ LV D+ TGKP+G+ F Y DQ NL
Sbjct: 16 VFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMRNL 75
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GR +RVD+ K + E
Sbjct: 76 NGYEIGGRNLRVDNACTEKSRME 98
>gi|357627631|gb|EHJ77269.1| hypothetical protein KGM_03087 [Danaus plexippus]
Length = 425
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F++ G ++ LV D+ TGKP+G+ F Y+DQ NL
Sbjct: 8 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 67
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GR++RVD+ K + E
Sbjct: 68 NGYEIGGRSLRVDNACTEKSRME 90
>gi|291225111|ref|XP_002732544.1| PREDICTED: RNA binding motif protein, Y-linked, family 1, member
A1-like [Saccoglossus kowalevskii]
Length = 479
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VY+ G+ D E L ++ G++ DV L++DK TG+ RGFAFV YE + L
Sbjct: 14 VYLAGLSADTDETALELEMSKFGQVADVLLIKDKTTGRSRGFAFVTYETSSDAALAVTGL 73
Query: 92 NGAQILGRTIRVDHVAK 108
NG + +G+ I+VDH K
Sbjct: 74 NGKEFMGKVIKVDHAKK 90
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
+YVG +PF ++E DL +F Q G++ ++NL+ DK TG+ RGFAFV E + ++L
Sbjct: 6 LYVGNLPFRISENDLRELFEQYGQVNEINLIVDKMTGQSRGFAFVTMETSQAAQSAIDSL 65
Query: 92 NGAQILGRTIRVD 104
NG I GR I V+
Sbjct: 66 NGTSISGRQIVVN 78
>gi|301100496|ref|XP_002899338.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104255|gb|EEY62307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 414
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------QRNNL 91
V+VG IP+D+TE L +F++ G +++ LV D+ TGKP+G+ F Y D NL
Sbjct: 15 VFVGNIPYDVTEDMLKEIFSEAGSVMNFRLVTDRETGKPKGYGFCEYADGATALSAMRNL 74
Query: 92 NGAQILGRTIRVD 104
NG +I GR +RVD
Sbjct: 75 NGYEINGRNLRVD 87
>gi|325189600|emb|CCA24085.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 358
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------QRNNL 91
V+VG IP+D+TE L +F++ G +++ LV D+ +GKP+G+ F Y D NL
Sbjct: 17 VFVGNIPYDVTEEMLREIFSEAGAVMNFRLVTDRDSGKPKGYGFCEYADGATALSAMRNL 76
Query: 92 NGAQILGRTIRVD 104
NG +I GR +RVD
Sbjct: 77 NGYEINGRNLRVD 89
>gi|332372985|gb|AEE61634.1| unknown [Dendroctonus ponderosae]
Length = 409
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F + G+++ LV D+ TGKP+G+ F Y DQ NL
Sbjct: 16 VFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMRNL 75
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GR++RVD+ K + E
Sbjct: 76 NGYEIGGRSLRVDNACTEKSRME 98
>gi|225711846|gb|ACO11769.1| Cleavage stimulation factor 64 kDa subunit [Lepeophtheirus
salmonis]
Length = 330
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------QRNNL 91
V+VG IP++ TE L +F++ G + LV D+ GKP+G+ F Y+D NL
Sbjct: 18 VFVGNIPYEATEEKLKDIFSEVGPVTSFKLVYDRENGKPKGYGFCEYKDADMALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GRT+RVD+ K + E
Sbjct: 78 NGYEIEGRTLRVDNACTEKNRLE 100
>gi|158292144|ref|XP_313699.3| AGAP004414-PA [Anopheles gambiae str. PEST]
gi|157017295|gb|EAA09129.3| AGAP004414-PA [Anopheles gambiae str. PEST]
Length = 390
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 18/117 (15%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+D TE L +F + G ++ + LV D+ TGKP+G+ F Y+D+ NL
Sbjct: 18 VFVGNIPYDATEEALKEIFCEVGLVLSMKLVYDRETGKPKGYGFCEYKDKETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSH 148
NG GR +RVD+ K R E R E G+ C H
Sbjct: 78 NGYVFGGRPLRVDNACTEKS------------RMEMAALLHVNRAESPYGEHCSPQH 122
>gi|172036857|ref|YP_001803358.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354554661|ref|ZP_08973965.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171698311|gb|ACB51292.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353553470|gb|EHC22862.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
+YVG +P+++TE DL VF+ G + V++ D+ TG+PRGFAFV E + N L
Sbjct: 3 IYVGNLPYEVTEADLNFVFSDYGSVKRVHVPTDRDTGRPRGFAFVELEQKANETNAIETL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GRT++VD
Sbjct: 63 DGAEWMGRTMKVD 75
>gi|91094479|ref|XP_970762.1| PREDICTED: similar to cleavage stimulation factor 64-kDa subunit
[Tribolium castaneum]
Length = 424
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F + G+++ LV D+ TGKP+G+ F Y DQ NL
Sbjct: 16 VFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMRNL 75
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG +I GR +RVD+ K + E
Sbjct: 76 NGYEIGGRNLRVDNACTEKSRME 98
>gi|406831762|ref|ZP_11091356.1| RNA-binding protein (RRM domain) [Schlesneria paludicola DSM 18645]
Length = 101
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
+YVG +PF ++E DL+ +FA+ G + V + DK TG+PRGFAFV ++ L
Sbjct: 4 IYVGNLPFTVSEPDLMGMFARYGRVSSVRMATDKSTGRPRGFAFVTMNRMEDSDEAIVRL 63
Query: 92 NGAQILGRTIRVD 104
NG+ + GRTI V+
Sbjct: 64 NGSHLSGRTIVVN 76
>gi|428165677|gb|EKX34667.1| hypothetical protein GUITHDRAFT_119213 [Guillardia theta CCMP2712]
Length = 219
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------D 86
K + ++VG +PF ++E +L A+F + GE+V V+L+ D+ +G+PRGF FV Y+ D
Sbjct: 132 KGAFTLFVGNLPFRISEAELQALFEKHGEVVSVSLIHDQESGRPRGFGFVDYDNEQSAKD 191
Query: 87 QRNNLNGAQILGRTIRV 103
+NLNG + GR I V
Sbjct: 192 AVSNLNGMPLDGREISV 208
>gi|312371125|gb|EFR19385.1| hypothetical protein AND_22609 [Anopheles darlingi]
Length = 377
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+D TE L +F + G ++ + LV D+ TGKP+G+ F Y+D+ NL
Sbjct: 18 VFVGNIPYDATEEALKEIFCEVGLVMSMKLVYDRETGKPKGYGFCEYKDKETALSAMRNL 77
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG GR +RVD+ K + E
Sbjct: 78 NGYVFGGRPLRVDNACTEKSRLE 100
>gi|31201653|ref|XP_309774.1| AGAP010918-PA [Anopheles gambiae str. PEST]
gi|21293399|gb|EAA05544.1| AGAP010918-PA [Anopheles gambiae str. PEST]
Length = 393
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F + G ++ + LV D+ +GKP+G+ F Y+DQ NL
Sbjct: 16 VFVGNIPYEATEEKLKDIFCEVGPVLSLKLVFDRESGKPKGYGFCEYKDQETALSAMRNL 75
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG + GR +RVD+ K + E
Sbjct: 76 NGYEFGGRALRVDNACTEKSRME 98
>gi|320168617|gb|EFW45516.1| hypothetical protein CAOG_03500 [Capsaspora owczarzaki ATCC 30864]
Length = 385
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN-- 89
KDS V+VG I +D+TE +++ + +Q G ++ LV D+ TGKP+GF F Y D
Sbjct: 1 MKDSKCVFVGNISYDVTEQEVIDLCSQVGPVISFRLVFDRDTGKPKGFGFCEYTDAETAQ 60
Query: 90 ----NLNGAQILGRTIRVD 104
NLN ++ GR IRVD
Sbjct: 61 SAIRNLNDLELKGRRIRVD 79
>gi|355681348|gb|AER96779.1| cleavage stimulation factor, 3 pre-RNA subunit 2, tau [Mustela
putorius furo]
Length = 174
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 43 IPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NLNGAQI 96
IP++ TE L +F++ G +V LV D+ TGKP+G+ F Y+DQ NLNG +
Sbjct: 2 IPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREF 61
Query: 97 LGRTIRVDHVAKYKKKEE 114
GR +RVD+ A K KEE
Sbjct: 62 SGRALRVDNAASEKNKEE 79
>gi|428308134|ref|YP_007144959.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428249669|gb|AFZ15449.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 113
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY--EDQRN----NL 91
+YVG + +++TE DL +VFA+ G + VNL D+ TG+PRGFAFV EDQ N L
Sbjct: 3 IYVGNLSYEVTEDDLNSVFAEYGTVKRVNLPNDRETGRPRGFAFVEMQTEDQENAAIEAL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRDLKVN 75
>gi|268569468|ref|XP_002640530.1| Hypothetical protein CBG18692 [Caenorhabditis briggsae]
Length = 85
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
VYVG PF TE ++ F+Q G + +V +V D+ TG+PRGFAFV Y D++ N L
Sbjct: 7 VYVGNAPFQSTEQEIGDFFSQKGNVTNVRIVYDRETGRPRGFAFVEYSDEQSAQRAVNEL 66
Query: 92 NGAQILGRTIRVD 104
NGA GR +RV+
Sbjct: 67 NGADFNGRQLRVN 79
>gi|395329428|gb|EJF61815.1| hypothetical protein DICSQDRAFT_154995 [Dichomitus squalens
LYAD-421 SS1]
Length = 374
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN----- 89
S V+VG +P+++ E L+ VF G++V + LV D+ TGKP+G+ F + D
Sbjct: 2 SKVVFVGNVPYNMAEDQLIDVFKSVGQVVGLRLVFDRDTGKPKGYGFCEFADHETAASAV 61
Query: 90 -NLNGAQILGRTIRVD 104
NLNG +I GR +R+D
Sbjct: 62 RNLNGYEIGGRPLRID 77
>gi|308490983|ref|XP_003107683.1| CRE-CPF-2 protein [Caenorhabditis remanei]
gi|308250552|gb|EFO94504.1| CRE-CPF-2 protein [Caenorhabditis remanei]
Length = 345
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
V+VG I +D+TE + A+FA+ G ++ + +V D+ TGKP+G+ F+ + D L
Sbjct: 20 VFVGNISYDVTEETIRAIFAKAGHVMSIKMVHDRETGKPKGYGFIEFPDINTADTAIRVL 79
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG ++ GR +RVD A EE
Sbjct: 80 NGYELGGRVLRVDSAAGGMNMEE 102
>gi|282898657|ref|ZP_06306645.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281196525|gb|EFA71434.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 96
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV-----AYEDQR-NNL 91
+Y+G + + TE DL AVFA GE+ V L D+ TGK RGFAFV A ED + L
Sbjct: 3 IYIGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGKMRGFAFVEMNEDAQEDAAISEL 62
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEETRQR 122
+GA+ +GR +RV+ K K KEE + E R R
Sbjct: 63 DGAEWMGRQLRVN---KAKPKEENNRENRPR 90
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D +++GG+ F+ E L A F + G I V+++RD+ T K RGF FV Y+ D
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+ +NG + GRTIRVD K
Sbjct: 63 MDGMNGQTLDGRTIRVDEAGK 83
>gi|452840079|gb|EME42017.1| hypothetical protein DOTSEDRAFT_72945 [Dothistroma septosporum
NZE10]
Length = 339
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V++G IP+ ++E ++ +F+ CG++++ LV DK TG+P+GF F+ Y D + NL
Sbjct: 11 VFIGNIPYGVSEEMIMEIFSSCGKVMNFRLVYDKETGQPKGFGFLEYSDTDSAQSAIRNL 70
Query: 92 NGAQILGRTIRVDH 105
N ++ GRT+RVD
Sbjct: 71 NEYELNGRTLRVDF 84
>gi|393903982|gb|EFO15894.2| cleavage stimulation factor [Loa loa]
Length = 337
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG I +++ E L VFAQ G +V + LV D+ TGKP+G+ F Y D + NL
Sbjct: 28 VFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIRNL 87
Query: 92 NGAQILGRTIRVDHVA 107
NG ++ GR +RVD A
Sbjct: 88 NGFELNGRPLRVDSAA 103
>gi|312094880|ref|XP_003148175.1| cleavage stimulation factor [Loa loa]
Length = 334
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG I +++ E L VFAQ G +V + LV D+ TGKP+G+ F Y D + NL
Sbjct: 28 VFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIRNL 87
Query: 92 NGAQILGRTIRVDHVA 107
NG ++ GR +RVD A
Sbjct: 88 NGFELNGRPLRVDSAA 103
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D +++GG+ F+ E L A F + G I V+++RDK TG+ RGF FV Y+ D
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 63 LEGMNGKTLDGRAIRVDEAGK 83
>gi|218185350|gb|EEC67777.1| hypothetical protein OsI_35315 [Oryza sativa Indica Group]
Length = 495
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ R NL
Sbjct: 14 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 73
Query: 92 NGAQILGRTIRVD 104
G +I GR +RVD
Sbjct: 74 QGYEINGRQLRVD 86
>gi|17553656|ref|NP_499734.1| Protein CPF-2 [Caenorhabditis elegans]
gi|3877650|emb|CAB05746.1| Protein CPF-2 [Caenorhabditis elegans]
Length = 336
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG I +D++E + ++F++ G ++ + +V D+ TGKP+G+ F+ + D + NL
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG ++ GR +RVD A EE
Sbjct: 80 NGYELSGRILRVDSAAGGMNMEE 102
>gi|259489992|ref|NP_001159130.1| hypothetical protein [Zea mays]
gi|223942157|gb|ACN25162.1| unknown [Zea mays]
gi|413925479|gb|AFW65411.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 499
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ R NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 92 NGAQILGRTIRVD 104
G +I GR +RVD
Sbjct: 73 QGYEINGRQLRVD 85
>gi|402080986|gb|EJT76131.1| cleavage stimulation factor 64-kDa subunit [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 304
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 6/75 (8%)
Query: 37 YVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------N 90
V+VG IP+ L+E + +F++ G++++ LV D+ TGKP+GF F Y D + N
Sbjct: 9 VVFVGNIPYGLSEEQITDIFSRAGKVINFRLVYDRETGKPKGFGFAEYPDADSAASAVRN 68
Query: 91 LNGAQILGRTIRVDH 105
LN ++I+GR +RVD
Sbjct: 69 LNDSEIMGRKLRVDF 83
>gi|115484443|ref|NP_001065883.1| Os11g0176100 [Oryza sativa Japonica Group]
gi|62733690|gb|AAX95801.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77548917|gb|ABA91714.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113644587|dbj|BAF27728.1| Os11g0176100 [Oryza sativa Japonica Group]
gi|215695427|dbj|BAG90666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615613|gb|EEE51745.1| hypothetical protein OsJ_33161 [Oryza sativa Japonica Group]
Length = 495
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ R NL
Sbjct: 14 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 73
Query: 92 NGAQILGRTIRVD 104
G +I GR +RVD
Sbjct: 74 QGYEINGRQLRVD 86
>gi|413925481|gb|AFW65413.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 624
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ R NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 92 NGAQILGRTIRVD 104
G +I GR +RVD
Sbjct: 73 QGYEINGRQLRVD 85
>gi|326494800|dbj|BAJ94519.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ R NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVVDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 92 NGAQILGRTIRVD 104
G ++ GR +RVD
Sbjct: 73 QGYEVNGRQLRVD 85
>gi|356574567|ref|XP_003555417.1| PREDICTED: uncharacterized protein LOC100806489 [Glycine max]
Length = 544
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV D+ TGKP+G+ F Y+D+ R NL
Sbjct: 11 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 92 NGAQILGRTIRVD 104
G +I GR +RVD
Sbjct: 71 QGYEINGRQLRVD 83
>gi|218192960|gb|EEC75387.1| hypothetical protein OsI_11855 [Oryza sativa Indica Group]
Length = 218
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV--AYEDQR-- 88
+DS + V + F T DLLA+F +CGE++D+ + RD+ TG RGFAFV YED+
Sbjct: 13 RDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQK 72
Query: 89 --NNLNGAQILGRTIRVDHVAKY 109
+ L+G + GR I V AKY
Sbjct: 73 AVDKLDGRTVDGRDIMV-QFAKY 94
>gi|356535727|ref|XP_003536395.1| PREDICTED: uncharacterized protein LOC100794399 [Glycine max]
Length = 545
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV D+ TGKP+G+ F Y+D+ R NL
Sbjct: 11 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 92 NGAQILGRTIRVD 104
G +I GR +RVD
Sbjct: 71 QGYEINGRQLRVD 83
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNLN 92
A +YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y ED R L
Sbjct: 337 AILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMALQ 396
Query: 93 ---GAQILGRTIRVDHV-----AKYKKKEEEDE 117
G ++ GRT+RV+ V KY +++ DE
Sbjct: 397 QMEGFELAGRTLRVNTVHEKGTTKYTQQDSLDE 429
>gi|225156280|ref|ZP_03724758.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
gi|224803012|gb|EEG21257.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
Length = 106
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
+YVG + F+ +E DL F+ CG + DV L D+ TG+PRGFAFV ++ + L
Sbjct: 5 LYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGRPRGFAFVTFDTAEESQLATEKL 64
Query: 92 NGAQILGRTIRVDHV 106
NG + GR I V+
Sbjct: 65 NGTDLGGRAITVNEA 79
>gi|226528788|ref|NP_001140273.1| uncharacterized protein LOC100272317 [Zea mays]
gi|194698788|gb|ACF83478.1| unknown [Zea mays]
gi|414588427|tpg|DAA38998.1| TPA: hypothetical protein ZEAMMB73_344937 [Zea mays]
Length = 491
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ R NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 92 NGAQILGRTIRVD 104
G +I GR +RVD
Sbjct: 73 QGYEINGRQLRVD 85
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNLN 92
A +YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y ED R L
Sbjct: 337 AILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMALQ 396
Query: 93 ---GAQILGRTIRVDHV-----AKYKKKEEEDE 117
G ++ GRT+RV+ V KY +++ DE
Sbjct: 397 QMEGFELAGRTLRVNTVHEKGTTKYTQQDSLDE 429
>gi|449494200|ref|XP_004159476.1| PREDICTED: uncharacterized protein LOC101225147 [Cucumis sativus]
Length = 527
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV D+ TGKP+G+ F Y+D+ R NL
Sbjct: 9 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
Query: 92 NGAQILGRTIRVD 104
G +I GR +RVD
Sbjct: 69 QGYEINGRQLRVD 81
>gi|449446484|ref|XP_004141001.1| PREDICTED: uncharacterized protein LOC101211663 [Cucumis sativus]
Length = 527
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV D+ TGKP+G+ F Y+D+ R NL
Sbjct: 9 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
Query: 92 NGAQILGRTIRVD 104
G +I GR +RVD
Sbjct: 69 QGYEINGRQLRVD 81
>gi|108708538|gb|ABF96333.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
Length = 206
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV--AYEDQR-- 88
+DS + V + F T DLLA+F +CGE++D+ + RD+ TG RGFAFV YED+
Sbjct: 13 RDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQK 72
Query: 89 --NNLNGAQILGRTIRVDHVAKY 109
+ L+G + GR I V AKY
Sbjct: 73 AVDKLDGRTVDGRDIMV-QFAKY 94
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D +++GG+ F+ E L A F + G I V+++RDK TG+ RGF FV Y+ D
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 63 LEGMNGKTLDGRAIRVDEAGK 83
>gi|389624649|ref|XP_003709978.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
70-15]
gi|351649507|gb|EHA57366.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
70-15]
gi|440467437|gb|ELQ36660.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae Y34]
gi|440480452|gb|ELQ61114.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
P131]
Length = 305
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 37 YVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------N 90
V+VG IP+ L+E + +F++ G++++ LV D+ TGKP+GF F Y D + N
Sbjct: 9 VVFVGNIPYGLSEEQITDIFSRAGKVLNFRLVYDRETGKPKGFGFAEYPDNDSAASAVRN 68
Query: 91 LNGAQILGRTIRVDH 105
LN +I+GR +RVD
Sbjct: 69 LNDTEIMGRKLRVDF 83
>gi|242067641|ref|XP_002449097.1| hypothetical protein SORBIDRAFT_05g004860 [Sorghum bicolor]
gi|241934940|gb|EES08085.1| hypothetical protein SORBIDRAFT_05g004860 [Sorghum bicolor]
Length = 545
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ R NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 92 NGAQILGRTIRVD 104
G +I GR +RVD
Sbjct: 73 QGYEINGRQLRVD 85
>gi|158335765|ref|YP_001516937.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359461305|ref|ZP_09249868.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158306006|gb|ABW27623.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VY+G + +++TE DL AVFA+ GE+ V L D+ +G+ RGF FV +D+ N L
Sbjct: 3 VYIGNLSYEVTEDDLSAVFAEYGEVKQVKLPVDRESGRKRGFGFVEMQDESNEEKAIEEL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GRT++V+
Sbjct: 63 DGAEWMGRTLKVN 75
>gi|357157437|ref|XP_003577798.1| PREDICTED: uncharacterized protein LOC100840159 [Brachypodium
distachyon]
Length = 477
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ R NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVVDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 92 NGAQILGRTIRVD 104
G ++ GR +RVD
Sbjct: 73 QGYEVNGRQLRVD 85
>gi|336389603|gb|EGO30746.1| hypothetical protein SERLADRAFT_455043 [Serpula lacrymans var.
lacrymans S7.9]
Length = 583
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 11/91 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNL--- 91
+YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y ED R L
Sbjct: 360 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQM 419
Query: 92 NGAQILGRTIRVDHV-----AKYKKKEEEDE 117
G ++ GRT+RV+ V A+Y +++ DE
Sbjct: 420 EGFELAGRTLRVNTVHEKGTARYAQQDTLDE 450
>gi|115453325|ref|NP_001050263.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|50582745|gb|AAT78815.1| putative splicing factor (having alternative splicing products)
[Oryza sativa Japonica Group]
gi|108708536|gb|ABF96331.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
gi|113548734|dbj|BAF12177.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|222625042|gb|EEE59174.1| hypothetical protein OsJ_11097 [Oryza sativa Japonica Group]
Length = 205
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV--AYEDQR-- 88
+DS + V + F T DLLA+F +CGE++D+ + RD+ TG RGFAFV YED+
Sbjct: 13 RDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQK 72
Query: 89 --NNLNGAQILGRTIRVDHVAKY 109
+ L+G + GR I V AKY
Sbjct: 73 AVDKLDGRTVDGRDIMV-QFAKY 94
>gi|226443342|ref|NP_001139887.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Salmo salar]
gi|221219686|gb|ACM08504.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Salmo salar]
Length = 221
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VYV +PF LT DL +F++ G++V V +V+DK T K +G AFV + D+ + +L
Sbjct: 12 VYVSNLPFSLTNSDLHKLFSKYGKVVKVTIVKDKETRKSKGVAFVLFLDKESAQSCFRSL 71
Query: 92 NGAQILGRTIR 102
N Q+ GRT++
Sbjct: 72 NNKQLFGRTVK 82
>gi|336376609|gb|EGO04944.1| hypothetical protein SERLA73DRAFT_174031 [Serpula lacrymans var.
lacrymans S7.3]
Length = 583
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 11/91 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNL--- 91
+YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y ED R L
Sbjct: 360 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQM 419
Query: 92 NGAQILGRTIRVDHV-----AKYKKKEEEDE 117
G ++ GRT+RV+ V A+Y +++ DE
Sbjct: 420 EGFELAGRTLRVNTVHEKGTARYAQQDTLDE 450
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 11/93 (11%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNL- 91
A +YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y ED R L
Sbjct: 222 AILYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARMALE 281
Query: 92 --NGAQILGRTIRVDHV-----AKYKKKEEEDE 117
G ++ GRT+RV+ V A+Y +++ DE
Sbjct: 282 QMEGFELAGRTLRVNTVHEKGTARYTQQDSLDE 314
>gi|359495190|ref|XP_002264617.2| PREDICTED: uncharacterized protein LOC100256296 [Vitis vinifera]
gi|297739347|emb|CBI29337.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV D+ TGKP+G+ F Y+D+ R NL
Sbjct: 9 VFVGNIPYDATEEQLIQICEEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
Query: 92 NGAQILGRTIRVD 104
G +I GR +RVD
Sbjct: 69 QGYEINGRQLRVD 81
>gi|413925480|gb|AFW65412.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 118
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ R NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 92 NGAQILGRTIRVDH 105
G +I GR +RVD
Sbjct: 73 QGYEINGRQLRVDF 86
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 30 AKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE---- 85
A D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E
Sbjct: 12 AMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDD 71
Query: 86 --DQRNNLNGAQILGRTIRVDHVAK 108
D +NG + GR IRVD K
Sbjct: 72 AKDAMMAMNGKSVDGRQIRVDQAGK 96
>gi|324514401|gb|ADY45855.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 324
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG I +++ E L VF+Q G +V + LV D+ TGKP+G+ F Y D + NL
Sbjct: 25 VFVGNISYEVGEEQLKQVFSQVGPVVHLRLVHDRETGKPKGYGFCEYNDPQTAESAIRNL 84
Query: 92 NGAQILGRTIRVDHVA 107
NG ++ GR +RVD A
Sbjct: 85 NGYELNGRQLRVDSAA 100
>gi|312075541|ref|XP_003140463.1| RNA recognition domain-containing protein [Loa loa]
gi|307764379|gb|EFO23613.1| RNA recognition domain-containing protein [Loa loa]
Length = 359
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 19/135 (14%)
Query: 4 LTQVKRIQHINSKEADLGIS-----------DDASWHAKYKDSAYVYVGGIPFDLTEGDL 52
LT + ++ SKEA L ++ D KY V+VG +P+D++E +L
Sbjct: 187 LTFYVKFKNAKSKEAALALNGEKYDGNLLRVDSCCAKRKYNCRTTVFVGNLPYDVSENEL 246
Query: 53 LAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN-----NLNGAQILGRTIRVDHVA 107
+A F G + V +VRD TG +GFAFVA++D L+G+ R +R V
Sbjct: 247 IAHFEMSGNVSFVRIVRDSRTGNSKGFAFVAFKDSAAVPLALQLDGSIFKRRPLRTKRV- 305
Query: 108 KYKKKEEEDEETRQR 122
+KK + +T QR
Sbjct: 306 --QKKNKVKSQTYQR 318
>gi|193678935|ref|XP_001949378.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Acyrthosiphon pisum]
Length = 226
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
VYV +PF+LT DL VF + G++V V +V+DK T + +G AFV + +Q +
Sbjct: 11 VYVSNLPFNLTNNDLHKVFEKYGKLVKVTIVKDKTTRQSKGVAFVLFLNQNEANICVKST 70
Query: 92 NGAQILGRTIR 102
NG Q+ GRT++
Sbjct: 71 NGIQMFGRTLK 81
>gi|346466155|gb|AEO32922.1| hypothetical protein [Amblyomma maculatum]
Length = 502
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN---- 89
+S V+VG +P ++ + +L FA CG++ V L+RDKGTG +GF FV ++++
Sbjct: 335 ESHTVFVGNLPHEVQDEELWTFFADCGDVTSVRLIRDKGTGMGKGFGFVTFKNRDGAALA 394
Query: 90 -NLNGAQILGRTIRVDHVAK--YKKKEEEDEETRQRMREER 127
+ G ++ GR +RV +K KK + QR+R+ +
Sbjct: 395 LEMAGRELCGRPVRVTEFSKQAAAKKASQQGTPGQRLRKAK 435
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D +++GG+ F+ E L F + G I V+++RDK TG+ RGF FV YE D
Sbjct: 3 DEGKLFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 63 MTAMNGKSLDGRAIRVDEAGK 83
>gi|341889641|gb|EGT45576.1| hypothetical protein CAEBREN_06918 [Caenorhabditis brenneri]
Length = 348
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
V+VG I +D+TE + A+F++ G ++ + +V D+ TGKP+G+ F+ + D + L
Sbjct: 19 VFVGNISYDVTEDTIRAMFSKAGPVMSIKMVHDRETGKPKGYGFIEFPDIQTADTAIRVL 78
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG ++ GR +RVD A EE
Sbjct: 79 NGHELGGRILRVDSAAGGMNMEE 101
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 30 AKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE---- 85
A D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E
Sbjct: 27 AMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDD 86
Query: 86 --DQRNNLNGAQILGRTIRVDHVAK 108
D +NG + GR IRVD K
Sbjct: 87 AKDAMMAMNGKSVDGRQIRVDQAGK 111
>gi|215712317|dbj|BAG94444.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 436
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE---------DQR 88
++VGG+P D TE D + F Q GEIVD ++RDK T +PRGF F+ Y D
Sbjct: 25 IFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDDI 84
Query: 89 NNLNGAQI-LGRTIRVDHV 106
+ NG Q+ + RTI D V
Sbjct: 85 HEFNGKQVEIKRTIPKDSV 103
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 10 IQHINSKEADL--GISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNL 67
I N K+ ++ I D+ +K + ++VGG+P LTE D F + G +VD +
Sbjct: 84 IHEFNGKQVEIKRTIPKDSVQSKDFK-TKKIFVGGLPQALTEDDFKHFFQKYGPVVDHQI 142
Query: 68 VRDKGTGKPRGFAFVAY 84
+RD T + RGF F+ +
Sbjct: 143 MRDHQTKRSRGFGFIVF 159
>gi|50552626|ref|XP_503723.1| YALI0E09174p [Yarrowia lipolytica]
gi|49649592|emb|CAG79313.1| YALI0E09174p [Yarrowia lipolytica CLIB122]
Length = 253
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VYVG IP+D TE +L +F G ++ + L+ DK TG+ +G+ F Y D NL
Sbjct: 6 VYVGSIPYDQTEEQMLDIFKSVGPVISLKLMFDKETGRSKGYGFAEYPDADTARSAIRNL 65
Query: 92 NGAQILGRTIRVDH 105
NG Q+ R +RVDH
Sbjct: 66 NGFQVGSRQLRVDH 79
>gi|195649947|gb|ACG44441.1| hypothetical protein [Zea mays]
gi|414588426|tpg|DAA38997.1| TPA: hypothetical protein ZEAMMB73_344937 [Zea mays]
Length = 130
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ R NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 92 NGAQILGRTIRVDH 105
G +I GR +RVD
Sbjct: 73 QGYEINGRQLRVDF 86
>gi|324532508|gb|ADY49239.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 115
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
VYVG IP++ +E D+ F+Q G +V+V LV D+ TG+P+GF F + D+ N L
Sbjct: 39 VYVGNIPYNCSEMDVGNFFSQAGPVVNVRLVYDRDTGRPKGFGFCDFADEISAQGAINTL 98
Query: 92 NGAQILGRTIRVD 104
NGA GR +RV+
Sbjct: 99 NGADFNGRALRVN 111
>gi|255572355|ref|XP_002527116.1| mRNA splicing factor, putative [Ricinus communis]
gi|223533539|gb|EEF35279.1| mRNA splicing factor, putative [Ricinus communis]
Length = 509
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L+ + + G +V LV D+ TGKP+G+ F Y+D+ R NL
Sbjct: 10 VFVGNIPYDATEEQLIDICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 69
Query: 92 NGAQILGRTIRVD 104
G +I GR +RVD
Sbjct: 70 QGYEINGRQLRVD 82
>gi|453084590|gb|EMF12634.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 344
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V++G IP+ ++E ++ +F + G++V+ LV DK TG+P+GF F+ Y D NL
Sbjct: 11 VFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDTDAAASAVRNL 70
Query: 92 NGAQILGRTIRVDH 105
N + + GRT+RVD+
Sbjct: 71 NESDLNGRTLRVDY 84
>gi|440635199|gb|ELR05118.1| hypothetical protein GMDG_07160 [Geomyces destructans 20631-21]
Length = 318
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+ LTE ++ +F+ G++V+ LV D+ TG+P+GF F Y D + NL
Sbjct: 10 VFVGNIPYGLTEEQIIDIFSSAGKVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVRNL 69
Query: 92 NGAQILGRTIRVDH 105
N +I+ R +RVD
Sbjct: 70 NDYEIMNRKLRVDF 83
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 11/91 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNL--- 91
+YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y ED R L
Sbjct: 375 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQM 434
Query: 92 NGAQILGRTIRVDHV-----AKYKKKEEEDE 117
G ++ GRT+RV+ V KY +++ DE
Sbjct: 435 EGFELAGRTLRVNTVHEKGTTKYAQQDSLDE 465
>gi|162455692|ref|YP_001618059.1| RNA recognition motif-containing protein [Sorangium cellulosum So
ce56]
gi|161166274|emb|CAN97579.1| RNA-binding region RNP-1 (RNA recognition motif) [Sorangium
cellulosum So ce56]
Length = 139
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY------EDQRNNL 91
+YVG +PF T+ + A FAQ GE+ DV++V D+ +G+ RGF FV + N+
Sbjct: 5 LYVGNLPFSATKASVQAAFAQSGEVTDVHIVTDRESGQSRGFGFVTMGTPEQAQQAIENM 64
Query: 92 NGAQILGRTIRVD 104
NGA + GR +RV+
Sbjct: 65 NGAMMDGRPLRVN 77
>gi|402221238|gb|EJU01307.1| hypothetical protein DACRYDRAFT_116497 [Dacryopinax sp. DJM-731
SS1]
Length = 320
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN-- 89
+ DS V+VG IP+ +TE L+ VF G +V LV D+ TGKP+G+ F + D
Sbjct: 3 HPDSRVVFVGNIPYGMTEEALIEVFRTVGPVVGFRLVFDRETGKPKGYGFCEFPDHETAM 62
Query: 90 ----NLNGAQILGRTIRVD 104
NL+G ++ GR +RVD
Sbjct: 63 SAVRNLHGYEVQGRPLRVD 81
>gi|46580620|ref|YP_011428.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120602071|ref|YP_966471.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|387153909|ref|YP_005702845.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
gi|46450039|gb|AAS96688.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120562300|gb|ABM28044.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|311234353|gb|ADP87207.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
Length = 89
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED-----QRNNLN 92
+YVG +PF +E D+ ++F GE+V V L+ D+ TG+PRGF FV D L+
Sbjct: 5 LYVGNLPFSASEDDVRSLFTNYGEVVSVKLIMDRETGRPRGFGFVEMNDGDAGAAIEALD 64
Query: 93 GAQILGRTIRVD 104
GA +GR +RV+
Sbjct: 65 GADFMGRALRVN 76
>gi|427783563|gb|JAA57233.1| Putative splicing factor sc35 [Rhipicephalus pulchellus]
Length = 214
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
VYV +PF LT DL +F + G++ V +++DK T K +G AFV + D + L
Sbjct: 12 VYVSNLPFKLTNNDLHQIFEKYGKVAKVTVMKDKQTWKSKGVAFVLFMDPESASKCASAL 71
Query: 92 NGAQILGRTIRVDHVAKY 109
N ++GRT+R +AKY
Sbjct: 72 NNQLLMGRTLRAS-IAKY 88
>gi|223938031|ref|ZP_03629929.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223893245|gb|EEF59708.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 114
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
+Y+G + FD TE D+ +FAQ G + +VNL+ DK TG+ RGF FV + NL
Sbjct: 4 LYIGNLSFDATENDVQDLFAQHGPVTEVNLIMDKMTGRARGFGFVTMSTKEGADAAVQNL 63
Query: 92 NGAQILGRTIRVD 104
NG Q GR + V+
Sbjct: 64 NGKQWQGRALTVN 76
>gi|402587151|gb|EJW81087.1| hypothetical protein WUBG_08006 [Wuchereria bancrofti]
Length = 334
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG I +++ E L VF+Q G +V + LV D+ TGKP+G+ F Y D + NL
Sbjct: 28 VFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIRNL 87
Query: 92 NGAQILGRTIRVDHVA 107
NG ++ GR +RVD A
Sbjct: 88 NGFELNGRPLRVDSAA 103
>gi|406867619|gb|EKD20657.1| RNA recognition motif containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 339
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+ LTE ++ +F+ G++++ LV D+ TG+P+GF FV + D + NL
Sbjct: 9 VFVGNIPYGLTEEQIIRIFSTAGKVLNFRLVYDRETGRPKGFGFVEFPDSDSAASAVRNL 68
Query: 92 NGAQILGRTIRVD 104
N +I+ R +RVD
Sbjct: 69 NDHEIMNRKLRVD 81
>gi|170574206|ref|XP_001892710.1| cleavage stimulation factor [Brugia malayi]
gi|158601568|gb|EDP38456.1| cleavage stimulation factor, putative [Brugia malayi]
Length = 334
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG I +++ E L VF+Q G +V + LV D+ TGKP+G+ F Y D + NL
Sbjct: 28 VFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDSQTAESAIRNL 87
Query: 92 NGAQILGRTIRVDHVA 107
NG ++ GR +RVD A
Sbjct: 88 NGFELNGRPLRVDSAA 103
>gi|452981005|gb|EME80765.1| hypothetical protein MYCFIDRAFT_139429 [Pseudocercospora fijiensis
CIRAD86]
Length = 301
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V++G IP+ ++E ++ +F + G++V+ LV DK TG+P+GF F+ Y D NL
Sbjct: 11 VFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDTDAAASAVRNL 70
Query: 92 NGAQILGRTIRVDH 105
N + GRT+RVD+
Sbjct: 71 NDFDLKGRTLRVDY 84
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 14/112 (12%)
Query: 3 PLTQVKRIQHINSKEADLGISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
P V+R ++ K G +D S+ A +YVG + F+LT+ DL VF G+I
Sbjct: 408 PPPPVQR-SYVAPKPRGPGPNDPNSY-------ARLYVGSLNFNLTDDDLRQVFQPFGDI 459
Query: 63 VDVNLVRDKGTGKPRGFAFVAYE---DQRN---NLNGAQILGRTIRVDHVAK 108
V+L RD+ TGK +G+AFV ++ D +N +NG Q+ GR +RV+ A+
Sbjct: 460 EYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKMNGFQLAGRALRVEIKAQ 511
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D +++GG+ +D TE L F++ G I V+++RD+ T + RGF FV +E D
Sbjct: 3 DEGKLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG Q+ GR IRVD K
Sbjct: 63 MAAMNGKQVDGRMIRVDEAGK 83
>gi|347830477|emb|CCD46174.1| hypothetical protein [Botryotinia fuckeliana]
Length = 323
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+ LTE ++ +F+ G +V+ LV D+ TG+P+GF F Y D + NL
Sbjct: 10 VFVGNIPYGLTEEQIIDIFSSAGNVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVRNL 69
Query: 92 NGAQILGRTIRVDH 105
N +I+ R +RVD
Sbjct: 70 NDYEIMNRKLRVDF 83
>gi|154290312|ref|XP_001545753.1| hypothetical protein BC1G_15665 [Botryotinia fuckeliana B05.10]
Length = 322
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+ LTE ++ +F+ G +V+ LV D+ TG+P+GF F Y D + NL
Sbjct: 10 VFVGNIPYGLTEEQIIDIFSSAGNVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVRNL 69
Query: 92 NGAQILGRTIRVDH 105
N +I+ R +RVD
Sbjct: 70 NDYEIMNRKLRVDF 83
>gi|115477046|ref|NP_001062119.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|42408771|dbj|BAD10006.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113624088|dbj|BAF24033.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|215765667|dbj|BAG87364.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201366|gb|EEC83793.1| hypothetical protein OsI_29708 [Oryza sativa Indica Group]
gi|222640778|gb|EEE68910.1| hypothetical protein OsJ_27766 [Oryza sativa Japonica Group]
Length = 362
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE---------DQR 88
++VGG+P D TE D + F Q GEIVD ++RDK T +PRGF F+ Y D
Sbjct: 25 IFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDDI 84
Query: 89 NNLNGAQI-LGRTIRVDHV 106
+ NG Q+ + RTI D V
Sbjct: 85 HEFNGKQVEIKRTIPKDSV 103
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 10 IQHINSKEADL--GISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNL 67
I N K+ ++ I D+ +K ++VGG+P LTE D F + G +VD +
Sbjct: 84 IHEFNGKQVEIKRTIPKDSVQSKDFKTKK-IFVGGLPQALTEDDFKHFFQKYGPVVDHQI 142
Query: 68 VRDKGTGKPRGFAFVAY------EDQRNNLNGAQILGRTIRV 103
+RD T + RGF F+ + +D N N + G + +
Sbjct: 143 MRDHQTKRSRGFGFIVFSSDQVVDDLLANGNMIDLAGAKVEI 184
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|308799677|ref|XP_003074619.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
gi|116000790|emb|CAL50470.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
Length = 318
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V++G +P+D TE L +F +CG + ++ LV ++ TGK +G+ FV ++D NL
Sbjct: 6 VFIGNVPYDATEASLTEIFCECGPVRELRLVTERDTGKLKGYGFVEFDDFATAMSAVRNL 65
Query: 92 NGAQILGRTIRVDHVAKYK 110
NG + GR +RVDH K
Sbjct: 66 NGREYNGRQLRVDHAETMK 84
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|392560296|gb|EIW53479.1| hypothetical protein TRAVEDRAFT_60908 [Trametes versicolor
FP-101664 SS1]
Length = 392
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN----- 89
S V+VG +P+++ E L+ VF G++V + LV D+ TGKP+G+ F + D
Sbjct: 2 SKVVFVGNVPYNMGEDSLIDVFKSVGQVVGLRLVFDRETGKPKGYGFCEFADHETALSAV 61
Query: 90 -NLNGAQILGRTIRVD 104
NLNG +I GR +R+D
Sbjct: 62 RNLNGQEIGGRPLRID 77
>gi|189219581|ref|YP_001940222.1| RNA-binding protein, RRM domain [Methylacidiphilum infernorum V4]
gi|189186439|gb|ACD83624.1| RNA-binding protein, RRM domain [Methylacidiphilum infernorum V4]
Length = 117
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------QRNNL 91
+YVG +P++LT+ DL +FA+ G I +V +VRD+ + + +GF FV D L
Sbjct: 33 LYVGNLPYNLTDSDLFEIFAKIGPIKNVEIVRDRKSNRTKGFGFVEMADLDSARKAATVL 92
Query: 92 NGAQILGRTIRV 103
NG +I+GR I V
Sbjct: 93 NGIEIMGRRIIV 104
>gi|340374250|ref|XP_003385651.1| PREDICTED: cleavage stimulation factor subunit 2-like [Amphimedon
queenslandica]
Length = 315
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
++V I F+ TE + AV ++ G ++ + L++D +GKPRGF F YED NL
Sbjct: 25 IFVANIAFETTEDQMRAVLSEVGPVLSLKLIQDPVSGKPRGFGFCEYEDAETARSACRNL 84
Query: 92 NGAQILGRTIRVD 104
G ++ GR +R+D
Sbjct: 85 AGRELNGRPLRID 97
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD TE L F++ G I +++ D+ TG+PRGF FV Y+ D
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+ +NG + GRTIRV+ +
Sbjct: 63 MDAMNGQSLDGRTIRVNEAGQ 83
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD TE L F++ G I +++ D+ TG+PRGF FV Y+ D
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+ +NG + GRTIRV+ +
Sbjct: 63 MDAMNGQSLDGRTIRVNEAGQ 83
>gi|261488364|emb|CBH19557.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
gi|261488394|emb|CBH19572.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
Length = 125
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE---------DQR 88
++VGG+P D TE D + F Q GEIVD ++RDK T +PRGF F+ Y D
Sbjct: 25 IFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDDI 84
Query: 89 NNLNGAQI-LGRTIRVDHV 106
+ NG Q+ + RTI D V
Sbjct: 85 HEFNGKQVEIKRTIPKDSV 103
>gi|350538255|ref|NP_001232562.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128621|gb|ACH45119.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|449299689|gb|EMC95702.1| hypothetical protein BAUCODRAFT_34465 [Baudoinia compniacensis UAMH
10762]
Length = 337
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------QRNNL 91
V++G IP+ ++E + +F + G +V LV DK T KP+GF F+ Y D NL
Sbjct: 11 VFIGNIPYGVSEEQICEIFGRVGNVVSFRLVYDKETNKPKGFGFLEYTDVDAAASAVRNL 70
Query: 92 NGAQILGRTIRVDH 105
N +++GRT+RVD+
Sbjct: 71 NEFEVMGRTLRVDY 84
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E +L VF + G+I +V +V+D+ T + RGF FV +E D
Sbjct: 5 DEGKLFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDAKDA 64
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 65 MEAMNGKSVDGRQIRVDQAGK 85
>gi|223938363|ref|ZP_03630257.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223892932|gb|EEF59399.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 127
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------ 88
S +YVG +PF TE +L +FAQ G + V+L+ DK +G+PRGF FV E Q
Sbjct: 2 STKLYVGNLPFTATENELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFVTMETQEGAQAAV 61
Query: 89 NNLNGAQILGRTIRVD 104
LNG GR + V+
Sbjct: 62 QALNGTDFGGRPLTVN 77
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD TE L F++ G I +++ D+ TG+PRGF FV Y+ D
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+ +NG + GRTIRV+ +
Sbjct: 63 MDAMNGQSLDGRTIRVNEAGQ 83
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD TE L F++ G I +++ D+ TG+PRGF FV Y+ D
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+ +NG + GRTIRV+ +
Sbjct: 63 MDAMNGQSLDGRTIRVNEAGQ 83
>gi|358054768|dbj|GAA99146.1| hypothetical protein E5Q_05837 [Mixia osmundae IAM 14324]
Length = 344
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
+++G +P+D TE L F+ G +V LV D TGK +GF FV + D NL
Sbjct: 25 IFIGNLPYDATEQQLAEHFSSAGPVVGARLVFDHDTGKAKGFGFVEFYDANVATSAVRNL 84
Query: 92 NGAQILGRTIRVDH 105
NG Q LGR +RVDH
Sbjct: 85 NGEQFLGRALRVDH 98
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix jacchus]
Length = 172
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN----- 89
S +++GG+ + LTE D+ FA+ GE+ V L ++ +G+P+GF +V + Q N
Sbjct: 494 SNTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNAAKAL 553
Query: 90 -NLNGAQILGRTIRVDHVAK 108
+NG + GR IR+D K
Sbjct: 554 ETMNGQALGGRPIRIDFAGK 573
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNL------ 91
++VG + +++ L + F Q G ++D + D+ +G+ RGF +V + L
Sbjct: 396 LWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVDFATSAEALRASKEA 455
Query: 92 NGAQILGRTIRVD 104
+G ++ GR +RVD
Sbjct: 456 HGKELDGRALRVD 468
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD TE L F++ G I +++ D+ TG+PRGF FV Y+ D
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDH 105
+NG + GRTIRV+
Sbjct: 63 MEGMNGQSLDGRTIRVNE 80
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|296414143|ref|XP_002836762.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295631601|emb|CAZ80953.1| unnamed protein product [Tuber melanosporum]
Length = 287
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 37 YVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------N 90
V+VG IP+ LTE + +F+ G ++ LV D+ TG+P+GF F Y DQ N
Sbjct: 11 IVFVGNIPYGLTEEQITEIFSSVGRVLSFRLVYDRETGRPKGFGFAEYSDQETAASAVRN 70
Query: 91 LNGAQILGRTIRVDH 105
L+ +I+GR +RVD
Sbjct: 71 LDNYEIMGRKLRVDF 85
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD TE L F++ G I +++ D+ TG+PRGF FV Y+ D
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDH 105
+NG + GRTIRV+
Sbjct: 63 MEGMNGQSLDGRTIRVNE 80
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|116181910|ref|XP_001220804.1| hypothetical protein CHGG_01583 [Chaetomium globosum CBS 148.51]
gi|88185880|gb|EAQ93348.1| hypothetical protein CHGG_01583 [Chaetomium globosum CBS 148.51]
Length = 315
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN--- 89
+ S V+VG IP+ LTE + +F+ G +++ LV D+ TG+P+GF F + D +
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 90 ---NLNGAQILGRTIRVDHVAKYKKKEEEDEETRQR 122
NLN +I+GR +RVD + + DE+ R R
Sbjct: 65 AVRNLNDYEIMGRKLRVD----FSNETVSDEDNRDR 96
>gi|426386443|ref|XP_004059694.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426386445|ref|XP_004059695.1| PREDICTED: cold-inducible RNA-binding protein isoform 3 [Gorilla
gorilla gorilla]
Length = 168
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|344307815|ref|XP_003422574.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Loxodonta africana]
Length = 169
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|326918654|ref|XP_003205603.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Meleagris gallopavo]
Length = 170
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|294896462|ref|XP_002775569.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
gi|239881792|gb|EER07385.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
Length = 361
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN----- 89
S V+VG +P+D+ E L ++F+ G +V L+ DK TG+P+G+ F Y DQ
Sbjct: 8 SCSVFVGNVPYDVDEEQLKSIFSTVGPVVSFRLMHDKVTGRPKGYGFCEYADQETAYAAM 67
Query: 90 -NLNGAQILGRTIRVD 104
NLN + GR +RVD
Sbjct: 68 RNLNNVECGGRPLRVD 83
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D +++GG+ F+ E L A F + G I V+++RDK TG+ RGF FV Y+ D
Sbjct: 3 DEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHV 106
+ +NG + GR IRVD
Sbjct: 63 LDAMNGKTLDGRAIRVDEA 81
>gi|156045437|ref|XP_001589274.1| hypothetical protein SS1G_09907 [Sclerotinia sclerotiorum 1980]
gi|154694302|gb|EDN94040.1| hypothetical protein SS1G_09907 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 321
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+ LTE ++ +F+ G +++ LV D+ TG+P+GF F Y D + NL
Sbjct: 9 VFVGNIPYGLTEEQIVDIFSSAGNVINFRLVYDRETGRPKGFGFAEYPDSDSAASAVRNL 68
Query: 92 NGAQILGRTIRVDH 105
N +I+ R +RVD
Sbjct: 69 NDYEIMNRKLRVDF 82
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 11/91 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNL--- 91
+YVG + F+L+E D+ VF GE+ V+L RD TG+ +G+AFV Y ED + L
Sbjct: 400 LYVGSLHFNLSESDIKQVFEPFGELEFVDLHRDPVTGRSKGYAFVQYKRAEDAKMALEQM 459
Query: 92 NGAQILGRTIRVDHV-----AKYKKKEEEDE 117
+G ++ GRT+RV+ V A+Y +++ DE
Sbjct: 460 DGFELAGRTLRVNTVHEKGSARYTQQDSLDE 490
>gi|261488392|emb|CBH19571.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
Length = 188
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE---------DQR 88
++VGG+P D TE D + F Q GEIVD ++RDK T +PRGF F+ Y D
Sbjct: 25 IFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDDI 84
Query: 89 NNLNGAQI-LGRTIRVDHV 106
+ NG Q+ + RTI D V
Sbjct: 85 HEFNGKQVEIKRTIPKDSV 103
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 10 IQHINSKEADL--GISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNL 67
I N K+ ++ I D+ +K + ++VGG+P E D F + G +VD +
Sbjct: 84 IHEFNGKQVEIKRTIPKDSVQSKDFK-TKKIFVGGLPQAQAEDDFKHFFQKYGPVVDHQI 142
Query: 68 VRDKGTGKPRGFAFVAY 84
+RD T + RGF F+ +
Sbjct: 143 MRDHQTKRSRGFGFIVF 159
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ F+ E L A F + G I V+++RDK TG+ RGF FV Y+ D + +
Sbjct: 7 LFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDALDAM 66
Query: 92 NGAQILGRTIRVD 104
NG + GR IRVD
Sbjct: 67 NGKTLDGRAIRVD 79
>gi|384915859|ref|ZP_10016064.1| RNA-binding protein, RRM domain (modular protein)
[Methylacidiphilum fumariolicum SolV]
gi|384526721|emb|CCG91935.1| RNA-binding protein, RRM domain (modular protein)
[Methylacidiphilum fumariolicum SolV]
Length = 255
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------QRNNL 91
+YVG +P++LT+ DL +FA+ G I +V ++RD+ T + +GF FV D L
Sbjct: 171 LYVGNLPYNLTDSDLFEIFAKVGPIKNVEIIRDRRTNRTKGFGFVEMADLDSARKAVTIL 230
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDE 117
N +++GR I V AK +KK+ E
Sbjct: 231 NRIEVMGRRIIVTG-AKSEKKDSTQE 255
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus glaber]
Length = 167
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|327290660|ref|XP_003230040.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 176
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ-----RNNLN 92
VYVG + F LTE D+ ++F+ CGE++ V L RD GK +G+AFV + D LN
Sbjct: 357 VYVGSLDFALTEADVKSLFSPCGEVISVTLNRDN--GKSKGYAFVQFADAGAAKLAMELN 414
Query: 93 GAQILGRTIRVD 104
G ++ GR ++V+
Sbjct: 415 GVEVAGRPLKVN 426
>gi|398396524|ref|XP_003851720.1| hypothetical protein MYCGRDRAFT_73484 [Zymoseptoria tritici IPO323]
gi|339471600|gb|EGP86696.1| hypothetical protein MYCGRDRAFT_73484 [Zymoseptoria tritici IPO323]
Length = 321
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V++G IP+D++E ++ +F + G++V LV DK T +P+GF F+ Y D + NL
Sbjct: 11 VFIGNIPYDVSEEQIMDIFGRTGQVVGFRLVYDKETQQPKGFGFLEYTDADSAASAVRNL 70
Query: 92 NGAQILGRTIRVDH 105
N ++ GRT+RVD+
Sbjct: 71 NDFELNGRTLRVDY 84
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 28 WHAKY-KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE- 85
W A D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E
Sbjct: 28 WKAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFEN 87
Query: 86 -----DQRNNLNGAQILGRTIRVDHVAK 108
D +NG + GR IRVD K
Sbjct: 88 IDDAKDAMMAMNGKSVDGRQIRVDQAGK 115
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
Length = 136
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ F+ E L VF++ G++ +V ++RD+ TG RGF FV +E D ++
Sbjct: 7 LFVGGLNFNTEEQSLEEVFSEYGQVSEVRIIRDRDTGTSRGFGFVTFESPDDAQDALTSM 66
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 67 NGRSLEGRQIRVDRAEK 83
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c [Taeniopygia
guttata]
Length = 175
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|238505292|ref|XP_002383875.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|317151540|ref|XP_001824733.2| nucleolin protein Nsr1 [Aspergillus oryzae RIB40]
gi|220689989|gb|EED46339.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|391872083|gb|EIT81226.1| nuclear localization sequence binding protein [Aspergillus oryzae
3.042]
Length = 525
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQR-- 88
+S ++VG IPF E L VF Q G I+ + L D +G+P+GF +V + E+ R
Sbjct: 386 ESDTLFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEAREA 445
Query: 89 -NNLNGAQILGRTIRVDH 105
N LNGA+I GR +R+D
Sbjct: 446 FNELNGAEIDGRPVRLDF 463
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNG- 93
SA ++VG + +++ E L + F + GE+ V ++ ++ TG+ RGF +V Y + +
Sbjct: 279 SANLFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAF 338
Query: 94 -----AQILGRTIRVDHV 106
+I GR I +D+
Sbjct: 339 EAKRDTEIDGRKINLDYA 356
>gi|161408091|dbj|BAF94149.1| cold-inducible RNA binding protein [Alligator mississippiensis]
Length = 165
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|67924769|ref|ZP_00518171.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416405804|ref|ZP_11687965.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
gi|67853394|gb|EAM48751.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357261220|gb|EHJ10516.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
Length = 94
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY------EDQRNNL 91
+YVG + +D+T+ DL VFA+ G + V L+ D+ TG+PRGF FV E L
Sbjct: 3 IYVGNLSYDVTDADLEQVFAEYGTVKRVQLLTDRETGRPRGFGFVEMDTETEEESAIEAL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GR +RV+
Sbjct: 63 DGAEWMGRALRVN 75
>gi|384498968|gb|EIE89459.1| hypothetical protein RO3G_14170 [Rhizopus delemar RA 99-880]
Length = 344
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN----- 89
S V+VG IPF+L+E L+ VF + G + L+ D+ TG+P+G+ F + D
Sbjct: 8 SRVVFVGNIPFELSEEQLIEVFKEVGPVASFRLLFDRETGRPKGYGFCEFYDAETAASAV 67
Query: 90 -NLNGAQILGRTIRVDHVA 107
NLN +I GR +RVD+ A
Sbjct: 68 RNLNDYEIGGRQLRVDYAA 86
>gi|453084738|gb|EMF12782.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 536
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN---NL 91
+A ++VGG+ D TE D A F + G ++D L+ DK TG+PRGF FV ++++ L
Sbjct: 185 TAKIFVGGVSQDATEQDFEAFFQKFGRVLDATLMMDKDTGRPRGFGFVTFDNEMAVERTL 244
Query: 92 NGA-QILGRTIRVDHVAKYKKKEEED 116
G ILG+ I V K +EE+
Sbjct: 245 EGPLAILGKPIEVKRAQPRGKMDEEN 270
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN 89
K+ +++GG+ ++ T+ L F+Q GE+++ ++RD TG+ RGF F+ + D +
Sbjct: 99 KEDGKMFIGGLNWETTDQSLKDYFSQFGEVIECTVMRDGATGRSRGFGFLTFRDPKT 155
>gi|440796891|gb|ELR17992.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 147
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY------EDQR 88
SA ++VGG+ + + L + F Q GE+VD +++D+ TGK RGF FV + E +
Sbjct: 2 SAKLFVGGLSWGTDDNSLRSAFEQHGEVVDAKVIQDRDTGKSRGFGFVTFASADEAEAAK 61
Query: 89 NNLNGAQILGRTIRVDHVA 107
N LN ++ GR IRVD +
Sbjct: 62 NALNQTELDGREIRVDSAS 80
>gi|197128626|gb|ACH45124.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|157112564|ref|XP_001657567.1| hypothetical protein AaeL_AAEL006197 [Aedes aegypti]
gi|108878012|gb|EAT42237.1| AAEL006197-PA [Aedes aegypti]
Length = 207
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
VY +PFDLT D+ +F + G++V V ++RDK T K +G AFV + + + +L
Sbjct: 13 VYASSLPFDLTNIDVRKIFEKYGQVVRVTILRDKQTRKSKGVAFVLFSNAKEADLCCTSL 72
Query: 92 NGAQILGRTIRVDHVAKYKKKEEE 115
N ++ GRT++V +AK K +E
Sbjct: 73 NNVEMFGRTLKV-SIAKDNGKADE 95
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|392882418|gb|AFM90041.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392884370|gb|AFM91017.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGGI F+ E L VFA+ G++ +V ++R++ T + +GF FV +E D
Sbjct: 3 DEGKLFVGGINFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGFGFVTFENPDDARDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVDH K
Sbjct: 63 LAGMNGKTVDGRQIRVDHAGK 83
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|223995751|ref|XP_002287549.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976665|gb|EED94992.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 76
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
V+VG + F TE L F++ G IV V +V D TGKPRGFAF+ +ED + N+
Sbjct: 1 VFVGNLAFSTTEEQLYTAFSELGRIVKVRMVSDNDTGKPRGFAFIEFEDPQAALSAIRNM 60
Query: 92 NGAQILGRTIRVD 104
N +I GR IRV+
Sbjct: 61 NDYEINGRRIRVN 73
>gi|258405873|ref|YP_003198615.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
gi|257798100|gb|ACV69037.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
Length = 87
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED-----QRNNLN 92
+YVG +PF TE ++ +FAQ GE+ V L+ D+ TG+PRGF FV ED L+
Sbjct: 4 IYVGNLPFSSTEDEVRDLFAQYGEVQSVKLISDRDTGRPRGFGFVEMEDGGADKAIEALD 63
Query: 93 GAQILGRTIRVDHVAKYKKKE 113
G GR++RV+ + K ++
Sbjct: 64 GTTFGGRSLRVNEARERKPRQ 84
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|126339500|ref|XP_001362144.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Monodelphis domestica]
Length = 217
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ + L
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 92 NGAQILGRTIR 102
N Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|197128619|gb|ACH45117.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128620|gb|ACH45118.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128623|gb|ACH45121.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128625|gb|ACH45123.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128627|gb|ACH45125.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128628|gb|ACH45126.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|47271546|ref|NP_112409.2| cold-inducible RNA-binding protein [Rattus norvegicus]
gi|46623308|gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 11/91 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNL--- 91
+YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y ED R L
Sbjct: 399 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARMALEQM 458
Query: 92 NGAQILGRTIRVDHV-----AKYKKKEEEDE 117
G ++ GRT+RV+ V +Y +++ DE
Sbjct: 459 EGFELAGRTLRVNTVHEKGTIRYTQQDSLDE 489
>gi|294951822|ref|XP_002787139.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
gi|239901796|gb|EER18935.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY--EDQRNN-- 90
SA V+VG +P+ +T+ L VF CG I + D+ TG PRGFA++ + ED N
Sbjct: 616 SASVFVGNLPWSMTQDWLYEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAENAT 675
Query: 91 -LNGAQILGRTIRVDH 105
L+G + GR IRV++
Sbjct: 676 KLSGTDLEGRQIRVNY 691
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN-----NLN 92
V++G +PF +T+ L +F+ CG+I V++ D +GK +GFAF+ + D+ + N
Sbjct: 514 VFIGNLPFSMTKEWLEQIFSWCGDIERVSIPTDWESGKIKGFAFLDFADEDSAEKAVGKN 573
Query: 93 GAQILGRTIRVDH 105
G GR +R+++
Sbjct: 574 GEDCEGRDLRINY 586
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur garnettii]
Length = 172
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D +++GG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFIGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 30 AKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE---- 85
A D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E
Sbjct: 12 AMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDD 71
Query: 86 --DQRNNLNGAQILGRTIRVDHVAK 108
D +NG + GR IRVD K
Sbjct: 72 AKDAMMAMNGKSVDGRQIRVDQAGK 96
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 6/75 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNL--- 91
+YVG + F+LTE D+ VF GE+ V+L RD GTG+ +G+AFV Y ED + L
Sbjct: 356 LYVGSLHFNLTEQDIKQVFEPFGELDFVDLHRDPGTGRSKGYAFVQYKRAEDAKMALEQM 415
Query: 92 NGAQILGRTIRVDHV 106
+G ++ GRT+RV+ V
Sbjct: 416 DGFELAGRTLRVNSV 430
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 51 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 110
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 111 MMAMNGKSVDGRQIRVDQAGK 131
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|67923998|ref|ZP_00517451.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416401054|ref|ZP_11687154.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67854173|gb|EAM49479.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357262154|gb|EHJ11338.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 81
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
+YVG + +++ E DL VFA+ G + V++ DK TG+PRGFAFV E + L
Sbjct: 3 IYVGNLSYEVKEEDLNEVFAEYGTVKRVHVPTDKETGRPRGFAFVELETKAEESSAIETL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GRT++VD
Sbjct: 63 DGAEWMGRTMKVD 75
>gi|126310751|ref|XP_001371554.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Monodelphis domestica]
Length = 217
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ + L
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 92 NGAQILGRTIR 102
N Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE---DQRN--- 89
A +YVG + F+LT+ D+ VF G+I V+L RD+ TGK +G+AFV ++ D +N
Sbjct: 450 ARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAME 509
Query: 90 NLNGAQILGRTIRVDHVAK 108
+NG Q+ GR +RV+ A+
Sbjct: 510 KMNGFQLAGRALRVEIKAQ 528
>gi|452851769|ref|YP_007493453.1| putative RNA-binding protein rbpE [Desulfovibrio piezophilus]
gi|451895423|emb|CCH48302.1| putative RNA-binding protein rbpE [Desulfovibrio piezophilus]
Length = 87
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ-----RNNLN 92
+YVG +P+ TE D+ A F GE+ V L+ D+ TG+PRGF FV EDQ NL+
Sbjct: 5 IYVGNLPWSSTEEDVRATFEAYGEVYSVKLINDRETGRPRGFGFVEMEDQGALEAIENLD 64
Query: 93 GAQILGRTIRVDH 105
G GR ++V+
Sbjct: 65 GKDFGGRNLKVNE 77
>gi|197128622|gb|ACH45120.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEESLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|387018118|gb|AFJ51177.1| Heterogeneous nuclear ribonucleoprotein G-like [Crotalus
adamanteus]
Length = 384
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G++I+V+ K
Sbjct: 70 NGKSLDGKSIKVEQATK 86
>gi|395538109|ref|XP_003771028.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Sarcophilus harrisii]
Length = 217
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ + L
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 92 NGAQILGRTIR 102
N Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|196005405|ref|XP_002112569.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
gi|190584610|gb|EDV24679.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
Length = 316
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ TE L +F G +V LV D+ +GKP+G+ F ++D+ NL
Sbjct: 15 VFVGNIPYEATEEQLKDIFGSAGPVVSFRLVYDRESGKPKGYGFCEFQDKETALSAMRNL 74
Query: 92 NGAQILGRTIRVDHVAKYKKKE 113
+G ++ GR++RVD A K K+
Sbjct: 75 SGYELNGRSLRVDSAASEKDKD 96
>gi|6680946|ref|NP_031731.1| cold-inducible RNA-binding protein [Mus musculus]
gi|346644681|ref|NP_001231002.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|46395643|sp|P60826.1|CIRBP_CRIGR RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|1060919|dbj|BAA11213.1| CIRP [Mus musculus]
gi|1783168|dbj|BAA19092.1| CIRP [Rattus norvegicus]
gi|12852647|dbj|BAB29491.1| unnamed protein product [Mus musculus]
gi|34099624|gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetulus griseus]
gi|49522692|gb|AAH75699.1| Cold inducible RNA binding protein [Mus musculus]
gi|74209036|dbj|BAE21245.1| unnamed protein product [Mus musculus]
gi|115345819|gb|ABI95367.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|148699640|gb|EDL31587.1| cold inducible RNA binding protein, isoform CRA_c [Mus musculus]
gi|149034580|gb|EDL89317.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
gi|149034581|gb|EDL89318.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
Length = 172
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|429853390|gb|ELA28465.1| RNA-binding protein [Colletotrichum gloeosporioides Nara gc5]
Length = 314
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+ L+E + +F+ G++++ LV D+ TG+P+GF F Y D + NL
Sbjct: 9 VFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDSAASAVRNL 68
Query: 92 NGAQILGRTIRVD 104
N +I+GR +RVD
Sbjct: 69 NDYEIMGRKLRVD 81
>gi|380489160|emb|CCF36888.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 314
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+ L+E + +F+ G++++ LV D+ TG+P+GF F Y D + NL
Sbjct: 9 VFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDSAASAVRNL 68
Query: 92 NGAQILGRTIRVDH 105
N +I+GR +RVD
Sbjct: 69 NDYEIMGRKLRVDF 82
>gi|327272940|ref|XP_003221242.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Anolis carolinensis]
Length = 216
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ + L
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 92 NGAQILGRTIR 102
N Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|374298432|ref|YP_005050071.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str. Walvis
Bay]
gi|332551368|gb|EGJ48412.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str. Walvis
Bay]
Length = 104
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE-----DQRNNLN 92
+YVG +PF TE D+ +FA G + V L+ D+ TG+PRGF FV + LN
Sbjct: 5 LYVGNLPFTATEDDIRNLFATHGNVNSVKLISDRETGRPRGFGFVEMDADGATSAEQALN 64
Query: 93 GAQILGRTIRVDHVAKYKKKE 113
GA GRT++V+ + ++E
Sbjct: 65 GASFGGRTLKVNEAQQKPRRE 85
>gi|417397313|gb|JAA45690.1| Putative rasgap sh3 binding protein rasputin [Desmodus rotundus]
Length = 218
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D +++GG+ FD TE L F++ G I +V++ R++ T + RGF FV +E D
Sbjct: 3 DEGKLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GRTIRVD K
Sbjct: 63 LEGMNGKSVDGRTIRVDEAGK 83
>gi|345315508|ref|XP_001517482.2| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Ornithorhynchus anatinus]
Length = 217
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ + L
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKGKGVAFILFLDKESAQNCSRTL 71
Query: 92 NGAQILGRTIR 102
N Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 11/91 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNL--- 91
+YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y ED + L
Sbjct: 360 LYVGSLHFNLTESDIRQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRGEDAKMALEQM 419
Query: 92 NGAQILGRTIRVDHV-----AKYKKKEEEDE 117
G ++ GRT+RV+ V +Y +E D+
Sbjct: 420 EGFELAGRTLRVNTVHEKGNVRYTPQESLDD 450
>gi|168033388|ref|XP_001769197.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679462|gb|EDQ65909.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN---- 89
D+ VYVGG+ ++ +E + F + GE+V V +V D+ +G+ RGF FV++ + R+
Sbjct: 3 DANSVYVGGLSYESSEDTVKKAFMEFGEVVSVKIVYDRESGESRGFGFVSFTNPRSATMA 62
Query: 90 --NLNGAQILGRTIRVDHVAK 108
+++G QI GRTIRV+ V K
Sbjct: 63 IRDMDGGQIEGRTIRVNEVRK 83
>gi|302926856|ref|XP_003054377.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735318|gb|EEU48664.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 294
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+ LTE + +F+ G++ LV D TG+P+GF F Y D + NL
Sbjct: 10 VFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEE 118
N +I+GR +RVD + K +E+ ++
Sbjct: 70 NDYEIMGRKLRVDFSNEQKSTDEDKDQ 96
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|83773473|dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 440
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQR-- 88
+S ++VG IPF E L VF Q G I+ + L D +G+P+GF +V + E+ R
Sbjct: 301 ESDTLFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEAREA 360
Query: 89 -NNLNGAQILGRTIRVDH 105
N LNGA+I GR +R+D
Sbjct: 361 FNELNGAEIDGRPVRLDF 378
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNG- 93
SA ++VG + +++ E L + F + GE+ V ++ ++ TG+ RGF +V Y + +
Sbjct: 194 SANLFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAF 253
Query: 94 -----AQILGRTIRVDHV 106
+I GR I +D+
Sbjct: 254 EAKRDTEIDGRKINLDYA 271
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD TE L F++ G I +++ D+ TG+PRGF FV Y+ D
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+ +NG + GRTIRV+ +
Sbjct: 63 MDAMNGQSLDGRTIRVNEAGQ 83
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|452823773|gb|EME30781.1| mRNA splicing factor, putative isoform 1 [Galdieria sulphuraria]
Length = 291
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN----- 89
S V+VG I ++ +E L + +Q G I+ +V D+ TGKP+G+AF Y D
Sbjct: 4 STTVFVGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMALSAI 63
Query: 90 -NLNGAQILGRTIRVD 104
NLNG ++ GRT+RVD
Sbjct: 64 RNLNGTELNGRTLRVD 79
>gi|268569436|ref|XP_002640522.1| Hypothetical protein CBG18684 [Caenorhabditis briggsae]
Length = 84
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
+YVG P+ TE ++ F+ G + +V +V D+ TG+PRGFAFV + +Q+ N L
Sbjct: 8 IYVGNAPYQTTEQEMGDFFSSVGTVTNVRIVLDRETGRPRGFAFVEFSEQQSAERAVNEL 67
Query: 92 NGAQILGRTIRVDHVAK 108
NGA GR +RV+ ++
Sbjct: 68 NGADFNGRQLRVNIASR 84
>gi|441656594|ref|XP_003277032.2| PREDICTED: cold-inducible RNA-binding protein [Nomascus leucogenys]
Length = 144
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF + G+I +V +V+D+ T + RGF FV +E D
Sbjct: 5 DEGKLFVGGLSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPEDAKDA 64
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 65 MEAMNGKSVDGRQIRVDQAGK 85
>gi|57106414|ref|XP_534835.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Canis lupus familiaris]
Length = 217
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNGA--- 94
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ + LN
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTRAI 71
Query: 95 ---QILGRTIR 102
Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNL- 91
A +YVG + F+LTE D+ VF GE+ V+L +D TG+ +G+AFV Y ED R L
Sbjct: 355 AILYVGSLHFNLTESDIKQVFEPFGELEFVDLHKDPMTGRSKGYAFVQYKRAEDARMALE 414
Query: 92 --NGAQILGRTIRVDHV 106
G ++ GRT+RV+ V
Sbjct: 415 QMEGFELAGRTLRVNTV 431
>gi|452840783|gb|EME42721.1| hypothetical protein DOTSEDRAFT_73510 [Dothistroma septosporum
NZE10]
Length = 529
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED----QRNN 90
+A ++VGG+ D TE D F + G ++D L+ DK TG+PRGF FV +++ +R
Sbjct: 184 TAKIFVGGVSQDATESDFKEFFMKFGRVLDATLMMDKDTGRPRGFGFVTFDNDLAVERTL 243
Query: 91 LNGAQILGRTIRVDHVAKYKKKEEEDEET 119
ILG+ I V A+ + K EDE T
Sbjct: 244 EGPLSILGKPIEVKR-AQPRGKMGEDEPT 271
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN 89
K+ +++GG+ ++ T+ L F+Q GE+++ ++RD TG+ RGF F+ ++D +
Sbjct: 98 KEDGKMFIGGLNWETTDESLKNYFSQFGEVIECTVMRDGATGRSRGFGFLTFKDPKT 154
>gi|434391462|ref|YP_007126409.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428263303|gb|AFZ29249.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 101
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
+YVG + F++T+ DL ++FA+ G + V L D+ TG PRGF FV E + L
Sbjct: 3 IYVGNLSFEVTQDDLSSIFAEYGTVKRVQLPTDRETGLPRGFGFVEMESEAAESTAIEAL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GRT++V+
Sbjct: 63 DGAEWMGRTMKVN 75
>gi|348550387|ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Cavia porcellus]
Length = 173
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D +++GG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFIGGLSFDTNEQSLEEVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|313240680|emb|CBY33001.1| unnamed protein product [Oikopleura dioica]
Length = 164
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
V+VG IP+ TE DL+ +F+ GE+V ++ D+ TG+PRG F + D+ + L
Sbjct: 87 VFVGNIPWSATENDLIDLFSAHGEVVKFRILTDRETGRPRGMGFCEFSDEASCQQAIDGL 146
Query: 92 NGAQILGRTIRVDH 105
NG GR +RVDH
Sbjct: 147 NGQDFNGRALRVDH 160
>gi|77917576|ref|NP_001030112.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Rattus norvegicus]
gi|116256279|sp|Q499V6.1|ZCRB1_RAT RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=U11/U12 small
nuclear ribonucleoprotein 31 kDa protein; Short=U11/U12
snRNP 31 kDa protein
gi|71121799|gb|AAH99747.1| Zinc finger CCHC-type and RNA binding motif 1 [Rattus norvegicus]
gi|149017620|gb|EDL76624.1| zinc finger CCHC-type and RNA binding motif 1 [Rattus norvegicus]
Length = 217
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNGA--- 94
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ + LN
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTRAI 71
Query: 95 ---QILGRTIR 102
Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|320587389|gb|EFW99869.1| nf-x1 finger transcription factor [Grosmannia clavigera kw1407]
Length = 1597
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN----- 89
S V+VG IP+ L+E + +F+ G +V LV D+ GKP+GF F Y D +
Sbjct: 1280 SKIVFVGNIPYGLSEEQISDIFSSAGRVVSFRLVYDRENGKPKGFGFAEYPDSDSAASAV 1339
Query: 90 -NLNGAQILGRTIRVD 104
NLN +++GR +RVD
Sbjct: 1340 RNLNDYEVMGRKLRVD 1355
>gi|50728210|ref|XP_416034.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Gallus gallus]
Length = 216
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ + L
Sbjct: 12 VYVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 92 NGAQILGRTIR 102
N Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|148699638|gb|EDL31585.1| cold inducible RNA binding protein, isoform CRA_a [Mus musculus]
gi|149034578|gb|EDL89315.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
gi|149034579|gb|EDL89316.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
Length = 168
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|449272006|gb|EMC82136.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Columba livia]
Length = 216
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ + L
Sbjct: 12 VYVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 92 NGAQILGRTIR 102
N Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 25 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 84
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 85 MMAMNGKSVDGRQIRVDQAGK 105
>gi|326911410|ref|XP_003202052.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Meleagris gallopavo]
Length = 216
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ + L
Sbjct: 12 VYVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 92 NGAQILGRTIR 102
N Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE---DQRN--- 89
A +YVG + F+LT+ D+ VF G+I V+L RD+ TGK +G+AFV ++ D +N
Sbjct: 450 ARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAME 509
Query: 90 NLNGAQILGRTIRVDHVAK 108
+NG Q+ GR +RV+ A+
Sbjct: 510 KMNGFQLAGRALRVEIKAQ 528
>gi|376297960|ref|YP_005169190.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
gi|323460522|gb|EGB16387.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
Length = 87
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ-----RNNLN 92
+YVG +P+ TE D+ A F GE++ V LV D+ TG+PRGF FV +DQ +L+
Sbjct: 5 IYVGNLPWSATEEDVRAAFETFGEVISVKLVNDRETGRPRGFGFVEMDDQGALAAIESLD 64
Query: 93 GAQILGRTIRVDH 105
G+ GR ++V+
Sbjct: 65 GSDFGGRNLKVNE 77
>gi|449273022|gb|EMC82651.1| Cold-inducible RNA-binding protein [Columba livia]
Length = 153
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|344243389|gb|EGV99492.1| Cold-inducible RNA-binding protein [Cricetulus griseus]
Length = 184
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|224093656|ref|XP_002196012.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Taeniopygia guttata]
Length = 216
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ + L
Sbjct: 12 VYVSNLPFALTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKESAQNCSRAL 71
Query: 92 NGAQILGRTIR 102
N Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|367018842|ref|XP_003658706.1| hypothetical protein MYCTH_2294810 [Myceliophthora thermophila ATCC
42464]
gi|347005973|gb|AEO53461.1| hypothetical protein MYCTH_2294810 [Myceliophthora thermophila ATCC
42464]
Length = 317
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN--- 89
+ S V+VG IP+ LTE + +F+ G +++ LV D+ TG+P+GF F + D +
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 90 ---NLNGAQILGRTIRVDHVAKYKKKEEEDEETRQR 122
NLN +I+GR +RVD + + D++ R R
Sbjct: 65 AVRNLNDYEIMGRKLRVD----FSNETVSDDDNRDR 96
>gi|313224670|emb|CBY20461.1| unnamed protein product [Oikopleura dioica]
Length = 164
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
V+VG IP+ TE DL+ +F+ GE+V ++ D+ TG+PRG F + D+ + L
Sbjct: 87 VFVGNIPWSATENDLIDLFSAHGEVVKFRILTDRETGRPRGMGFCEFSDEASCQQAIDGL 146
Query: 92 NGAQILGRTIRVDH 105
NG GR +RVDH
Sbjct: 147 NGQDFNGRALRVDH 160
>gi|242279861|ref|YP_002991990.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
gi|242122755|gb|ACS80451.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
Length = 88
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ-----RNNLN 92
+YVG +P+ +E D+ A F + GE++ V L+ D+ TG+PRGF FV ED+ NL+
Sbjct: 5 IYVGNLPWSSSEEDVRAAFEEFGEVISVKLINDRETGRPRGFGFVEMEDEGAIQAIENLD 64
Query: 93 GAQILGRTIRVDH 105
G+ GR ++V+
Sbjct: 65 GSDFGGRNLKVNE 77
>gi|168704512|ref|ZP_02736789.1| RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 129
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV----AYEDQRNNLNG 93
+YVG I F T DL+ F+Q G ++ +V D+ TG+ RGFAFV E+ LNG
Sbjct: 5 LYVGNISFQTTSDDLIQAFSQYGTVLGAQIVADRETGRSRGFAFVEMHDGAEEAIAALNG 64
Query: 94 AQILGRTIRVD 104
AQ+ GRT+ V+
Sbjct: 65 AQLSGRTLTVN 75
>gi|148672336|gb|EDL04283.1| mCG19744, isoform CRA_b [Mus musculus]
Length = 233
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNGA--- 94
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ + LN
Sbjct: 28 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTRAI 87
Query: 95 ---QILGRTIR 102
Q+ GR I+
Sbjct: 88 NNKQLFGRVIK 98
>gi|71000291|ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gi|66852477|gb|EAL92802.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus Af293]
Length = 546
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------Q 87
+S ++VG IPF E + +F Q G IV + L D +G+P+GF +V +
Sbjct: 406 ESDTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQA 465
Query: 88 RNNLNGAQILGRTIRVDH 105
N+LNGA++ GR +R+D
Sbjct: 466 FNDLNGAELNGRPVRLDF 483
>gi|159127852|gb|EDP52967.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus A1163]
Length = 546
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------Q 87
+S ++VG IPF E + +F Q G IV + L D +G+P+GF +V +
Sbjct: 406 ESDTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQA 465
Query: 88 RNNLNGAQILGRTIRVDH 105
N+LNGA++ GR +R+D
Sbjct: 466 FNDLNGAELNGRPVRLDF 483
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 27 SWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY-- 84
S H + +D+ + V + F T DL +F + GE+VD+++ RD+ TG+ RGFAFV Y
Sbjct: 7 SGHPENRDTFSLLVLNVSFRTTADDLFPLFDRYGEVVDIHIPRDRRTGESRGFAFVRYNY 66
Query: 85 ----EDQRNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREE 126
+D + L+G + GR + V AKY E+ R R+ EE
Sbjct: 67 EDEAQDAIDGLDGMRFGGRALMV-QFAKYGPNAEKIH--RGRITEE 109
>gi|242280537|ref|YP_002992666.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
gi|242123431|gb|ACS81127.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM 2638]
Length = 87
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED-----QRNNLN 92
+YVG +P+ TE ++ A F GE+V V L+ D+ TG+PRGF FV ED +NL+
Sbjct: 5 IYVGNLPWSATEDEVRAAFEAFGEVVSVKLIEDRETGRPRGFGFVEMEDAGAMEAIDNLD 64
Query: 93 GAQILGRTIRVDH 105
G GR ++V+
Sbjct: 65 GKDFGGRNLKVNE 77
>gi|168061382|ref|XP_001782668.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665828|gb|EDQ52499.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 82
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR----- 88
D+ VYVGG+ + TE L F Q GE+V V +V D+ +G+ RGF FV + + R
Sbjct: 3 DTNSVYVGGLSYGSTEETLKRSFMQFGEVVSVKIVHDRDSGESRGFGFVTFSNPRAATVA 62
Query: 89 -NNLNGAQILGRTIRVDHV 106
+++G QI GRTIRV+ V
Sbjct: 63 IQDMDGRQIEGRTIRVNEV 81
>gi|21313088|ref|NP_080301.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Mus musculus]
gi|81916891|sp|Q9CZ96.1|ZCRB1_MOUSE RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=MADP-1;
AltName: Full=U11/U12 small nuclear ribonucleoprotein 31
kDa protein; Short=U11/U12 snRNP 31 kDa protein
gi|12849869|dbj|BAB28513.1| unnamed protein product [Mus musculus]
gi|25005468|dbj|BAC23140.1| MADP-1 protein [Mus musculus]
gi|34849714|gb|AAH58368.1| Zcrb1 protein [Mus musculus]
Length = 217
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNGA--- 94
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ + LN
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTRAI 71
Query: 95 ---QILGRTIR 102
Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|19111886|ref|NP_595094.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74676196|sp|O94432.1|YHKF_SCHPO RecName: Full=Uncharacterized RNA-binding protein C660.15
gi|4049514|emb|CAA22535.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe]
Length = 474
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ 87
+A ++VGG+P D TE + F Q G ++D L+ DK TG+PRGF FV YE++
Sbjct: 246 TAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENE 298
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 13/179 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNGAQIL 97
+++GG+ ++ T+ L F Q GE++D ++RD TG+ RGF F+ +++ + +N +++
Sbjct: 165 MFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPK-CVN--EVM 221
Query: 98 GRTIRVD-HVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANT 156
+ +D + K+ +E+ + GV G+CT + F + R +
Sbjct: 222 SKEHHLDGKIIDPKRAIPREEQEKTAKMFVGGVP-----GDCTEEEFRNFFNQFGRVLDA 276
Query: 157 GGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGS-GRVALEGNPNQSDRREEKRSIRHDH 214
D+ + G + GF +N+S+ AT S + + G P + R K S+R H
Sbjct: 277 TLM-MDKDT--GRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATPKASLRDSH 332
>gi|268563939|ref|XP_002647049.1| C. briggsae CBR-CPF-2 protein [Caenorhabditis briggsae]
Length = 335
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
V+VG I +D+TE + +F + G ++ + +V D+ TGKP+G+ F+ + D L
Sbjct: 14 VFVGNISYDVTEETIRQIFTKAGHVLSIKMVHDRETGKPKGYGFIEFPDIATADTAIRVL 73
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
NG ++ GR +RVD A EE
Sbjct: 74 NGYELGGRVLRVDSAAGGMNMEE 96
>gi|90076360|dbj|BAE87860.1| unnamed protein product [Macaca fascicularis]
Length = 207
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|411119198|ref|ZP_11391578.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711061|gb|EKQ68568.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 104
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
VYVG + F +TE DL+ F++ G++V V L +D+ TG+ RGFAFV + + L
Sbjct: 3 VYVGNLSFKVTEDDLVETFSEYGKVVSVQLPKDRETGRMRGFAFVEMSSETEEAAAIDAL 62
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
+GA+ +GR ++V+ K K +EE
Sbjct: 63 DGAEWMGRDLKVN---KAKPREE 82
>gi|74206672|dbj|BAE41588.1| unnamed protein product [Mus musculus]
gi|148672337|gb|EDL04284.1| mCG19744, isoform CRA_c [Mus musculus]
Length = 216
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNGA--- 94
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ + LN
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALNCTRAI 71
Query: 95 ---QILGRTIR 102
Q+ GR I+
Sbjct: 72 NNKQLFGRVIK 82
>gi|21591633|gb|AAM64164.1|AF515695_1 cleavage stimulation factor 64 [Arabidopsis thaliana]
Length = 461
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L + + G +V LV D+ TGKP+G+ F Y+D+ R NL
Sbjct: 11 VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 92 NGAQILGRTIRVD 104
+I GR +RVD
Sbjct: 71 QSYEINGRQLRVD 83
>gi|22330574|ref|NP_177325.2| cleavage stimulating factor 64 [Arabidopsis thaliana]
gi|7239507|gb|AAF43233.1|AC012654_17 Contains similarity to the polyadenylation factor 64 kDa subunit
from Xenopus laevis gb|U17394; It contains RNA
recognition motif PF|00076. ESTs gb|AI993960 and T42211
come from this gene [Arabidopsis thaliana]
gi|110738120|dbj|BAF00992.1| cleavage stimulation factor like protein [Arabidopsis thaliana]
gi|332197113|gb|AEE35234.1| cleavage stimulating factor 64 [Arabidopsis thaliana]
Length = 461
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L + + G +V LV D+ TGKP+G+ F Y+D+ R NL
Sbjct: 11 VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 92 NGAQILGRTIRVD 104
+I GR +RVD
Sbjct: 71 QSYEINGRQLRVD 83
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana) tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana) tropicalis]
Length = 166
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ F+ TE L VF++ G++ +V +V+D+ + + RGF FV +E D
Sbjct: 4 DEGKLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|119492303|ref|ZP_01623650.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119453188|gb|EAW34355.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 101
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 49/73 (67%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
+YVG + +++TE DL +VFA+ G + V++ D+ TG+PRGFAFV +++ L
Sbjct: 3 IYVGNLSYEVTEEDLKSVFAEYGTVQRVSIPTDRETGRPRGFAFVEMQEESKEDAAIEAL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRDLKVN 75
>gi|427417097|ref|ZP_18907280.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425759810|gb|EKV00663.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 91
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV--AYEDQRNN----L 91
+YVG + +D T+ D+ AVFA+ G + V+L D+ TG+PRGFAFV + ED+ + L
Sbjct: 3 IYVGNLSYDATQEDINAVFAEYGTVQRVHLPTDRETGRPRGFAFVEMSSEDEETSAIEAL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GR +RV+
Sbjct: 63 DGAEWMGRDLRVN 75
>gi|310800360|gb|EFQ35253.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 314
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+ L+E + +F+ G++++ LV D+ TG+P+GF F Y D + NL
Sbjct: 9 VFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDSAASAVRNL 68
Query: 92 NGAQILGRTIRVDH 105
N +I+GR +RVD
Sbjct: 69 NDYEIMGRKLRVDF 82
>gi|414588425|tpg|DAA38996.1| TPA: hypothetical protein ZEAMMB73_344937, partial [Zea mays]
Length = 163
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------R 88
S + VG IP+D TE L+ + + G +V LV DK TGKP+G+ F Y+D+ R
Sbjct: 43 SISITVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSAR 102
Query: 89 NNLNGAQILGRTIRVDH 105
NL G +I GR +RVD
Sbjct: 103 RNLQGYEINGRQLRVDF 119
>gi|351710775|gb|EHB13694.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Heterocephalus glaber]
Length = 207
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VYV +PF +T DL +F++C ++V V +V+DK T + +G AF+ + D+ + +
Sbjct: 12 VYVSNLPFSVTNNDLYRIFSKCSKVVKVTIVKDKDTRRSKGVAFILFLDKNSAQNCTRAI 71
Query: 92 NGAQILGRTIR 102
N Q+ GR I+
Sbjct: 72 NNKQLFGRAIK 82
>gi|436841541|ref|YP_007325919.1| RNP-1 like RNA-binding protein [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
gi|432170447|emb|CCO23818.1| RNP-1 like RNA-binding protein [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
Length = 87
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ-----RNNLN 92
+YVG +P+ +E D+ A F GE++ V L+ D+ TG+PRGF FV ED +NL+
Sbjct: 5 IYVGNLPWSASEDDVRAAFEAYGEVISVKLIEDRETGRPRGFGFVEMEDNGALDAIDNLD 64
Query: 93 GAQILGRTIRVDH 105
G GR ++V+
Sbjct: 65 GKDFGGRNLKVNE 77
>gi|452821825|gb|EME28851.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 149
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY------EDQRNNL 91
V+VGG+P+ + E DL F++ GE+VD +V ++ TG+ RGF FV+Y E+ L
Sbjct: 9 VFVGGLPWSVGEDDLRETFSKYGEVVDARVVVERETGRSRGFGFVSYAEGSSVEECIAAL 68
Query: 92 NGAQILGRTIRVDHVAKYKKKE 113
+G + GRTIRV+ +++E
Sbjct: 69 DGQDMQGRTIRVNKAMSREQRE 90
>gi|4098580|gb|AAD00327.1| RBM1 [Macropus eugenii]
Length = 402
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 75/179 (41%), Gaps = 29/179 (16%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ E DL +VF + G IV V L++D+ T K RGFAFV +E D ++
Sbjct: 9 LFIGGLNVGTNEKDLESVFGKYGHIVKVLLMKDQETNKSRGFAFVTFESPAAAKDAARDM 68
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQ 151
NG + G++I+V+ K E RG R + G G E
Sbjct: 69 NGKALDGKSIKVEQAN--KPSFESGRRGPPPAPRSRGPPRGLRHGRGGSG--------EA 118
Query: 152 RAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSI 210
R GP R GH G+S N SS + G P QS + KRS
Sbjct: 119 R------GPP----RGGHMDDSGYSLNFNMGSSMGP---LLVKRGAPPQSGQPSPKRSA 164
>gi|297839015|ref|XP_002887389.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333230|gb|EFH63648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 460
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP+D TE L + + G +V LV D+ TGKP+G+ F Y+D+ R NL
Sbjct: 10 VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 69
Query: 92 NGAQILGRTIRVD 104
+I GR +RVD
Sbjct: 70 QSYEINGRQLRVD 82
>gi|681912|dbj|BAA06523.1| RNA-binding protein cp33 [Arabidopsis thaliana]
Length = 321
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY------EDQRNNL 91
+YVG +P+ +T +L +F + G +VDV +V DK T + RGF FV ++
Sbjct: 110 LYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMF 169
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEETRQR 122
N +QI GRT++V+ + E E T+ R
Sbjct: 170 NSSQIGGRTVKVNFPEVPRGGENEVMRTKIR 200
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 32 YKDSAY-VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN- 89
Y DS + VY G + ++LT L F ++ ++ ++ TG+ RGF F+++E N
Sbjct: 206 YVDSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENV 265
Query: 90 -----NLNGAQILGRTIRVDHVAKYKK 111
+NG ++ GR +R++ ++ +K
Sbjct: 266 QSALATMNGVEVEGRALRLNLASEREK 292
>gi|396473500|ref|XP_003839355.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
gi|312215924|emb|CBX95876.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
Length = 547
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR---NNLNGA 94
++VGG+ + TE D A F Q G +VD L+ DK TG+PRGF FV ++ L G
Sbjct: 173 IFVGGVSQEATEEDFTAFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLKGP 232
Query: 95 -QILGRTIRV 103
QILG+ I V
Sbjct: 233 LQILGKPIEV 242
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR 88
+++GG+ ++ TE L F Q GE+ + ++RD TG+ RGF F+ + D +
Sbjct: 89 MFIGGLNWETTEDSLKGYFTQFGEVSECTVMRDSATGRSRGFGFLTFRDPK 139
>gi|258405611|ref|YP_003198353.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
gi|257797838|gb|ACV68775.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
Length = 86
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED----QRNNLNG 93
+YVG +PF TE ++ + F GE+ V L+ D+ TG+PRGF FV D NL+G
Sbjct: 5 IYVGNLPFSATEDEVRSAFGAYGEVTSVKLIEDRETGRPRGFGFVEMSDGGEQAIENLDG 64
Query: 94 AQILGRTIRVDH 105
GRT++V+
Sbjct: 65 QDFGGRTLKVNE 76
>gi|410964145|ref|XP_003988616.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Felis catus]
Length = 217
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VYV +PF LT DL +F++ G++V V +++DK T K +G AF+ + D+ + +
Sbjct: 12 VYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRAI 71
Query: 92 NGAQILGRTIR 102
N Q+ GR I+
Sbjct: 72 NNKQVFGRVIK 82
>gi|119492702|ref|XP_001263670.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
gi|119411830|gb|EAW21773.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
Length = 533
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------QRNNL 91
++VG IPF E + +F Q G IV + L D +G+P+GF +V + N+L
Sbjct: 397 LFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAFNDL 456
Query: 92 NGAQILGRTIRVDH 105
NGA++ GR +R+D
Sbjct: 457 NGAELNGRPVRLDF 470
>gi|357111564|ref|XP_003557582.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 354
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
+YVG +P+ T +L +VF++ G + DV ++ DK T + RGFAFV
Sbjct: 123 IYVGNLPYTFTAAELTSVFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKAVQMF 182
Query: 92 NGAQILGRTIRVDH 105
NGA + GRTIRV+
Sbjct: 183 NGALLGGRTIRVNF 196
>gi|148235865|ref|NP_001079794.1| cold-inducible RNA-binding protein B [Xenopus laevis]
gi|82247034|sp|Q9DED4.1|CIRBB_XENLA RecName: Full=Cold-inducible RNA-binding protein B; AltName:
Full=Cold-inducible RNA-binding protein 2; Short=xCIRP2;
AltName: Full=Glycine-rich RNA-binding protein CIRP-B
gi|11761319|dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis]
gi|32450232|gb|AAH54250.1| Xcirp2 protein [Xenopus laevis]
Length = 166
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D +++GG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 3 DEGKLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 63 MMAMNGKAVDGRQIRVDQAGK 83
>gi|156376506|ref|XP_001630401.1| predicted protein [Nematostella vectensis]
gi|156217421|gb|EDO38338.1| predicted protein [Nematostella vectensis]
Length = 215
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNGA--- 94
VYVG +P+ LT DL VF + G++V V ++RDK T + RG AF+ + D+++ N
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAV 71
Query: 95 ---QILGRTIRV 103
Q+ GRTI+
Sbjct: 72 NKKQMFGRTIKC 83
>gi|428208904|ref|YP_007093257.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428010825|gb|AFY89388.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 103
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 9/83 (10%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV------AYEDQRNNL 91
+YVG + +D+T+ DL VFA G + V L D+ +G+PRGF FV A E + L
Sbjct: 3 IYVGNLSYDVTQEDLTKVFADYGTVTRVQLPIDRESGRPRGFGFVEMETEDAEEAAISEL 62
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
+GA+ +GR ++V+ K K +EE
Sbjct: 63 DGARWMGRVLKVN---KAKPREE 82
>gi|428214099|ref|YP_007087243.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428002480|gb|AFY83323.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 104
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
+YVG + +++T+ DL AVFA+ G + V+L D+ TG+PRGFAFV + + L
Sbjct: 3 IYVGNLSYEVTQEDLTAVFAEYGSVQRVHLPTDRETGRPRGFAFVEMKSETEETAAIEAL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRDMKVN 75
>gi|388852481|emb|CCF53883.1| related to RNA-binding region containing protein 2 [Ustilago
hordei]
Length = 678
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNL- 91
A +YVG + F LT+ ++ AVF GEI V+L R+ GTGK +GF F+ + ED + L
Sbjct: 427 ARLYVGSLHFSLTDENVKAVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKHAEDAKKALE 486
Query: 92 --NGAQILGRTIRVDHV 106
NG ++ GR IRV +V
Sbjct: 487 QMNGFELAGRAIRVGNV 503
>gi|443694236|gb|ELT95429.1| hypothetical protein CAPTEDRAFT_160825 [Capitella teleta]
Length = 548
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP++ +E L VF Q G ++ LV D+ TGKP+G+ F Y+D NL
Sbjct: 26 VFVGNIPYEASEEQLKEVFQQAGPVISFRLVYDRETGKPKGYGFCEYQDVETAQSAMRNL 85
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
N GR +RV A + K+E
Sbjct: 86 NNYDYNGRPLRVGVAAGEQSKDE 108
>gi|15231200|ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
gi|681910|dbj|BAA06522.1| RNA-binding protein cp33 [Arabidopsis thaliana]
gi|4886289|emb|CAB43448.1| RNA-binding protein cp33 precursor [Arabidopsis thaliana]
gi|14517544|gb|AAK62662.1| AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|18700226|gb|AAL77723.1| AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|21553418|gb|AAM62511.1| RNA-binding protein cp33 [Arabidopsis thaliana]
gi|332645419|gb|AEE78940.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
Length = 329
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY------EDQRNNL 91
+YVG +P+ +T +L +F + G +VDV +V DK T + RGF FV ++
Sbjct: 118 LYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMF 177
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEETRQR 122
N +QI GRT++V+ + E E T+ R
Sbjct: 178 NSSQIGGRTVKVNFPEVPRGGENEVMRTKIR 208
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 32 YKDSAY-VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN- 89
Y DS + VY G + ++LT L F ++ ++ ++ TG+ RGF F+++E N
Sbjct: 214 YVDSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENV 273
Query: 90 -----NLNGAQILGRTIRVDHVAKYKK 111
+NG ++ GR +R++ ++ +K
Sbjct: 274 QSALATMNGVEVEGRALRLNLASEREK 300
>gi|340924219|gb|EGS19122.1| putative polyadenylation factor [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 294
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN--- 89
+ S V+VG IP+ LTE + +F+ G++++ LV D+ TG+P+GF F + D +
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGKVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 90 ---NLNGAQILGRTIRVDH 105
NLN +I+GR +RVD
Sbjct: 65 AVRNLNDYEIMGRKLRVDF 83
>gi|452823774|gb|EME30782.1| mRNA splicing factor, putative isoform 2 [Galdieria sulphuraria]
Length = 308
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN-- 89
YK + + VG I ++ +E L + +Q G I+ +V D+ TGKP+G+AF Y D
Sbjct: 18 YKTTNFDQVGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMAL 77
Query: 90 ----NLNGAQILGRTIRVD 104
NLNG ++ GRT+RVD
Sbjct: 78 SAIRNLNGTELNGRTLRVD 96
>gi|313234527|emb|CBY10484.1| unnamed protein product [Oikopleura dioica]
Length = 333
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP++ TE + +F + G ++ LV D+ TGKP+G+ F Y+D NL
Sbjct: 27 VFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGYGFCEYKDTDTAMSAMRNL 86
Query: 92 NGAQILGRTIRVDHVAK 108
N ++ GR +RVDH +
Sbjct: 87 NTRELHGRNLRVDHATR 103
>gi|321460847|gb|EFX71885.1| hypothetical protein DAPPUDRAFT_93311 [Daphnia pulex]
Length = 81
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------QRN 89
A V+VG IP+ ++E L A+F++ G +V +V+D+ TG+ RGF F ++
Sbjct: 2 ASVFVGNIPYGVSEDQLKAIFSEAGPVVSFRIVQDRETGRSRGFGFCEFQSPDSAQTAMR 61
Query: 90 NLNGAQILGRTIRVD 104
NLNG ++ GR++RVD
Sbjct: 62 NLNGYELNGRSLRVD 76
>gi|213408421|ref|XP_002174981.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
gi|212003028|gb|EEB08688.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
Length = 453
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 8 KRIQHINSKE--ADLGISDD--ASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIV 63
K +Q + SKE D I D A + + +A ++VGG+P D TE + F Q G ++
Sbjct: 172 KCVQVVMSKEHHLDGKIIDPKRAIPREEQEKTAKMFVGGVPADCTEEEFRDFFNQFGRVL 231
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQ---RNNLNGAQIL--GRTIRV 103
D L+ DK TG+PRGF FV +E++ N ++ I G+ + V
Sbjct: 232 DATLMMDKDTGRPRGFGFVTFENEAAVENTMSQPYITIHGKPVEV 276
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR 88
+++GG+ ++ T+ L F Q GE++D ++RD TG+ RGF F+ ++D +
Sbjct: 122 MFIGGLNWETTDESLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKDPK 172
>gi|291049789|ref|NP_001166928.1| RNA binding motif protein [Monodelphis domestica]
gi|284080635|gb|ADB77891.1| RNA binding motif protein [Monodelphis domestica]
Length = 392
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKGLEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G++I+V+ K
Sbjct: 70 NGKSLDGKSIKVEQATK 86
>gi|317152646|ref|YP_004120694.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316942897|gb|ADU61948.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ-----RNNLN 92
+YVG +P++ TE +L A F GE+ V LV D T +PRGF FV DQ NLN
Sbjct: 5 LYVGNLPWNCTEEELRAAFEAYGEVRSVKLVNDHETDRPRGFGFVEMGDQGALEAVENLN 64
Query: 93 GAQILGRTIRVD 104
G+ + GR+I+V+
Sbjct: 65 GSSLGGRSIKVN 76
>gi|443315198|ref|ZP_21044702.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
gi|442785209|gb|ELR95045.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
Length = 103
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV-----AYEDQR-NNL 91
+YVG + +D+T DL VF + GE+ V+L D+ TG+PRGFAFV A ED+ L
Sbjct: 3 IYVGNLSYDVTREDLEQVFKEYGEVSRVSLPTDRETGRPRGFAFVDMQAEAEEDKAIEAL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GR +RV+
Sbjct: 63 DGAEWMGRDMRVN 75
>gi|452851689|ref|YP_007493373.1| putative RNA-binding protein rbpA [Desulfovibrio piezophilus]
gi|451895343|emb|CCH48222.1| putative RNA-binding protein rbpA [Desulfovibrio piezophilus]
Length = 87
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV-----AYEDQRNNLN 92
+YVG +P+ TE ++ A FA GE+ V L+ D+ TG+PRGF FV Y D L+
Sbjct: 5 IYVGNLPWSATEDEVRAAFAAYGEVTSVKLIEDRETGRPRGFGFVEMSEDGYLDAIEALD 64
Query: 93 GAQILGRTIRVDH 105
G GR I+V+
Sbjct: 65 GKDFGGRNIKVNE 77
>gi|345562877|gb|EGX45885.1| hypothetical protein AOL_s00112g74 [Arthrobotrys oligospora ATCC
24927]
Length = 280
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 39 YVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NLN 92
++G IP+ L+E ++ +F++ G+++ LV D+ TGKP+GF F Y D NL+
Sbjct: 12 FIGNIPYGLSEEQIVDIFSKVGQVLSFRLVYDRDTGKPKGFGFAEYADAEIAASAVRNLD 71
Query: 93 GAQILGRTIRVDH 105
+I+GR +RVD
Sbjct: 72 NFEIMGRKLRVDF 84
>gi|294933049|ref|XP_002780572.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
gi|239890506|gb|EER12367.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
Length = 540
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE-----DQRN 89
SA V+VG +P+ +T+ L VF CG I + D+ TG PRGFA++ ++ ++
Sbjct: 400 SASVFVGNLPWSMTQEWLSEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAEKAT 459
Query: 90 NLNGAQILGRTIRVDH 105
L+G + GR IRV++
Sbjct: 460 KLSGTDLEGRQIRVNY 475
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN-----NLN 92
V+VG +PF +T+ L +F+ CG+I V+L D +GK +GFAF+ + D+ + N
Sbjct: 296 VFVGNLPFSMTKEWLEQIFSWCGDIERVSLPTDWESGKIKGFAFLDFADEDSAEKAVGKN 355
Query: 93 GAQILGRTIRVDH 105
G GR +RV++
Sbjct: 356 GEDCEGRDLRVNY 368
>gi|431915005|gb|ELK15824.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 390
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ D E L AVF + G I++V L++D+ T + RGFAF+ +E D ++
Sbjct: 10 LFIGGLNIDTNEKALEAVFGKYGPIIEVLLMKDRETNRSRGFAFITFENPEDAKDATKDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKLIKVEQANK 86
>gi|159163576|pdb|1X5S|A Chain A, Solution Structure Of Rrm Domain In A18 Hnrnp
Length = 102
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 11 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 70
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 71 MMAMNGKSVDGRQIRVDQAGK 91
>gi|326924314|ref|XP_003208374.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Meleagris gallopavo]
Length = 385
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY------EDQR 88
SA ++VG I FD T+ + VF + G I V L D+ TG P+GF +V + +
Sbjct: 360 SATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAM 419
Query: 89 NNLNGAQILGRTIRVDH 105
NL G I GR IR+D+
Sbjct: 420 ENLTGVDIAGRPIRLDY 436
>gi|449267951|gb|EMC78842.1| Heterogeneous nuclear ribonucleoprotein G [Columba livia]
Length = 385
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAQDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|256073259|ref|XP_002572949.1| RNA binding protein [Schistosoma mansoni]
gi|353230968|emb|CCD77385.1| putative rna binding protein [Schistosoma mansoni]
Length = 547
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 23 SDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV 82
+D+ H K + V+VG +PFD TE ++ + + G I V L+RD TG RGF +V
Sbjct: 373 TDNDKTHCKLDNC--VFVGNLPFDCTEEEIYSTLSTLGSIKSVRLIRDSQTGAVRGFGYV 430
Query: 83 AYEDQR------NNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMR 124
AY D + N I R IR + +YK K+ +++E Q+ +
Sbjct: 431 AYNDPSIIPLAIRSSNTLSIRERQIR---IMEYKVKKIKNKEGYQQTK 475
>gi|434396627|ref|YP_007130631.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428267724|gb|AFZ33665.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 102
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY-----EDQR-NNL 91
+YVG IP+++T+ DL ++FA+ G + V L D+ TG+ RGF FV EDQ L
Sbjct: 3 IYVGNIPYEVTQEDLSSIFAEYGTVTRVYLPVDRETGRMRGFGFVEMSNETEEDQAIETL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GR +RV+
Sbjct: 63 DGAEWMGRELRVN 75
>gi|224097264|ref|XP_002190045.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 1
[Taeniopygia guttata]
Length = 377
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|410445335|gb|ADB77883.2| Rbmy [Bos taurus]
Length = 387
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+ +GG+ + TE L A F + G IV+V L++D+ T K RGFAF+ +E D +
Sbjct: 9 LLIGGLSAETTEESLEAEFGKYGHIVEVLLIKDRNTNKSRGFAFITFESPADAKDAAKEM 68
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+TI+V+ K
Sbjct: 69 NGKFLDGKTIKVEQANK 85
>gi|218885302|ref|YP_002434623.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|347730840|ref|ZP_08863950.1| RNA recognition motif family protein [Desulfovibrio sp. A2]
gi|218756256|gb|ACL07155.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|347520346|gb|EGY27481.1| RNA recognition motif family protein [Desulfovibrio sp. A2]
Length = 88
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED-----QRNNLN 92
+YVG +PF +E DL A+F+ GE+ V L+ D+ TG+PRGF FV +D L+
Sbjct: 5 LYVGNLPFSSSESDLRALFSNHGEVQSVALIMDRETGRPRGFGFVEMDDDGARAAMEALD 64
Query: 93 GAQILGRTIRVD 104
G GR+++V+
Sbjct: 65 GRDFQGRSLKVN 76
>gi|197632397|gb|ACH70922.1| elongation factor-1 delta-1 [Salmo salar]
Length = 203
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L F++ G I V++VRD+ T + RGF FV +E D
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 63 MAAMNGKSVDGRMIRVDEAGK 83
>gi|194206109|ref|XP_001915106.1| PREDICTED: RNA-binding protein 34 [Equus caballus]
Length = 428
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG IV V +VRD+ TG RGF +
Sbjct: 273 IRVDLASETSSRDKRSVFVGNLPYKVEESAVEEHFLDCGHIVAVRIVRDQVTGVGRGFGY 332
Query: 82 VAYEDQ-----RNNLNGAQILGRTIRVD-HVAKYKKKEEEDEETRQRMREERGVCRA 132
V +E+ LN ++++GR +RV V K K K+ + + + ++G+ A
Sbjct: 333 VLFENTDAVHLALKLNNSELMGRKLRVMRSVNKEKLKQNSNPSLKNATKPKQGLNSA 389
>gi|281202984|gb|EFA77185.1| hypothetical protein PPL_12393 [Polysphondylium pallidum PN500]
Length = 487
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 29 HAKYKDSAYVYVGGIPFDLTEGDLLAVFA-QCGEIVDVNLVRDKGTGKPRGFAFVAYE-- 85
H K KD V+VGGIP++L DL +F G+++ V +VRDK TG +GFA+V ++
Sbjct: 362 HNKGKDENTVFVGGIPYELENEDLFKLFEDNIGDVMSVRIVRDKLTGLGKGFAYVEFKKL 421
Query: 86 -DQRNNLNGAQI-LG-RTIRV 103
+ R + Q+ +G RTIRV
Sbjct: 422 INARRAIQAKQLSIGERTIRV 442
>gi|159155220|gb|AAI54771.1| Rbm34 protein [Danio rerio]
Length = 410
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 24 DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVA 83
D S H+K+ ++VG +P+D++E L F +CG I V LVRD+ +G +GF +V
Sbjct: 239 DRVSQHSKHDHKRSIFVGNLPYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVL 298
Query: 84 YEDQRN-----NLNGAQILGRTIRV 103
+E + LNG+ + R IRV
Sbjct: 299 FESPDSVMLALKLNGSTLQQRKIRV 323
>gi|448102174|ref|XP_004199739.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359381161|emb|CCE81620.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 7/74 (9%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLN 92
KD +++GG+ +D +E L+ F+Q GE+VD ++RD TGK RGF F+ ++D ++
Sbjct: 158 KDHGKMFIGGLNWDTSEQGLVDYFSQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKS--- 214
Query: 93 GAQILGRTIRVDHV 106
+ I+ DH+
Sbjct: 215 ----VEEVIKRDHI 224
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE 85
++VGGI + E + F+Q G I+D L+ DK TG+ RGF F+ Y+
Sbjct: 247 IFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYD 294
>gi|259089109|ref|NP_001158591.1| cold inducible RNA binding protein [Oncorhynchus mykiss]
gi|225705082|gb|ACO08387.1| Cold-inducible RNA-binding protein [Oncorhynchus mykiss]
Length = 209
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L F++ G I V++VRD+ T + RGF FV +E D
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 63 MAAMNGKSVDGRMIRVDEAGK 83
>gi|47222076|emb|CAG12102.1| unnamed protein product [Tetraodon nigroviridis]
Length = 215
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRN---NL 91
VYV +PF LT DL +F + G++V V +V+DK T + +G AFV + E RN +
Sbjct: 12 VYVSNLPFSLTNNDLHKLFTKYGKVVKVTIVKDKDTRRSKGVAFVLFLDRESARNCVRAV 71
Query: 92 NGAQILGRTIR 102
N Q+ GRT++
Sbjct: 72 NNKQLFGRTVK 82
>gi|348677689|gb|EGZ17506.1| hypothetical protein PHYSODRAFT_501188 [Phytophthora sojae]
Length = 293
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN--- 89
K A VYV GIP+ EGDL+ F+ CG + +V + R + +GKPRG+A V ++D+
Sbjct: 65 KTEATVYVEGIPYRANEGDLVTHFSSCGTVREVRMPRYQDSGKPRGYAHVVFDDEAALKK 124
Query: 90 --NLNGAQILGRTIRV-----DHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGD 142
L+G + R + + + KE+ T++ ++ R V E G
Sbjct: 125 ALKLDGQYLFNRYLSIRRAEAPRAVEMALKEKNQNTTKKAVKGCRTVFIKQLPYEVEEGT 184
Query: 143 GCKFSHNEQRAANTGGGPQDRSSRWGH-EKFEGFSWGKNDSSSRATGSGR 191
+ A+ G R W H +K +GF + + S A + R
Sbjct: 185 ------IREALASCGTITSVRLPIWNHTKKLKGFGYVEFSSEDEALAAAR 228
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNGAQIL 97
V++ +P+++ EG + A CG I V L T K +GF +V + + L A+
Sbjct: 171 VFIKQLPYEVEEGTIREALASCGTITSVRLPIWNHTKKLKGFGYVEFSSEDEALAAARRS 230
Query: 98 GRTI 101
G I
Sbjct: 231 GMKI 234
>gi|119331082|ref|NP_001073196.1| heterogeneous nuclear ribonucleoprotein G [Gallus gallus]
gi|53130710|emb|CAG31684.1| hypothetical protein RCJMB04_9j22 [Gallus gallus]
gi|169139272|gb|ACA48585.1| RNA binding motif protein, X-linked [Gallus gallus]
Length = 385
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|443896055|dbj|GAC73399.1| transcriptional coactivator CAPER [Pseudozyma antarctica T-34]
Length = 662
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRN--- 89
A +YVG + F LT+ ++ AVF GEI V+L R+ GTGK +GF F+ + +D R
Sbjct: 414 ARLYVGSLHFSLTDENVKAVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKHADDARKAHE 473
Query: 90 NLNGAQILGRTIRVDHV 106
+NG ++ GR IRV +V
Sbjct: 474 AMNGFELAGRAIRVGNV 490
>gi|346979364|gb|EGY22816.1| RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 306
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+ L+E + +F+ G++++ LV D+ TG+P+GF F Y D + NL
Sbjct: 9 VFVGNIPYGLSEEQITDIFSSAGKVINFRLVYDRETGRPKGFGFAEYPDHDSAASAVRNL 68
Query: 92 NGAQILGRTIRVDH 105
N + +GR +RVD
Sbjct: 69 NDYETMGRKLRVDF 82
>gi|345306629|ref|XP_001510789.2| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Ornithorhynchus anatinus]
Length = 420
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 36 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 95
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 96 NGKSLDGKAIKVEQATK 112
>gi|301095902|ref|XP_002897050.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108479|gb|EEY66531.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 286
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 15/169 (8%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN--- 89
K A VYV GIP+ +EGD++ F+ CG + +V + R + +GKPRG+A V ++D+
Sbjct: 59 KTEATVYVEGIPYKASEGDIVTHFSSCGTVREVRMPRYQDSGKPRGYAHVVFDDEAALEK 118
Query: 90 --NLNGAQILGRTIRVDHVAKYKKKEEE-DEETRQRMREERGVCRAFQRGEC---TRGDG 143
L+G + R + + + E E+T+ ++ CR + D
Sbjct: 119 ALELDGQYLFNRYLSIRRAEAPRAVEMALKEKTQNATKKAVKGCRTVYIKQLPYEVEEDT 178
Query: 144 CKFSHNEQRAANTGGGPQDRSSRWGH-EKFEGFSWGKNDSSSRATGSGR 191
+ Q A+ G R W H +K +GF + + S A + R
Sbjct: 179 IR-----QALASCGTITSVRLPIWNHTKKLKGFGYVEFSSEDEALAAAR 222
>gi|71043834|ref|NP_001020834.1| RNA-binding motif protein, X chromosome [Rattus norvegicus]
gi|81907907|sp|Q4V898.1|RBMX_RAT RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; AltName: Full=RNA-binding motif protein,
X chromosome retrogene; AltName: Full=RNA-binding motif
protein, X chromosome retrogene-like; Contains: RecName:
Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|66910650|gb|AAH97479.1| RNA binding motif protein, X-linked [Rattus norvegicus]
gi|149015799|gb|EDL75123.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_b [Rattus norvegicus]
Length = 390
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|50539824|ref|NP_001002382.1| RNA-binding protein 34 [Danio rerio]
gi|49900339|gb|AAH75875.1| RNA binding motif protein 34 [Danio rerio]
Length = 411
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 24 DDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVA 83
D S H+K+ ++VG +P+D++E L F +CG I V LVRD+ +G +GF +V
Sbjct: 240 DRVSQHSKHDHKRSIFVGNLPYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVL 299
Query: 84 YEDQRN-----NLNGAQILGRTIRV 103
+E + LNG+ + R IRV
Sbjct: 300 FESPDSVMLALKLNGSTLQQRKIRV 324
>gi|330847369|gb|AEC46650.1| cold inducible RNA binding protein transcript variant 2 [Sus
scrofa]
Length = 182
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + R F FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|291400889|ref|XP_002716811.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 391
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|152990027|ref|YP_001355749.1| RNA-binding protein RNP-1 [Nitratiruptor sp. SB155-2]
gi|151421888|dbj|BAF69392.1| RNA-binding protein RNP-1 [Nitratiruptor sp. SB155-2]
Length = 89
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN-----LN 92
+YVG +P+ E D+ +FAQ GE+ V L+ D+ TG+PRGF FV +D + L+
Sbjct: 4 IYVGNLPYSSNEEDVRELFAQYGEVTSVKLINDRETGRPRGFGFVEMDDSSADSAIEALD 63
Query: 93 GAQILGRTIRVD 104
G++ GR+++V+
Sbjct: 64 GSEFGGRSLKVN 75
>gi|67900726|ref|XP_680619.1| hypothetical protein AN7350.2 [Aspergillus nidulans FGSC A4]
gi|40742531|gb|EAA61721.1| hypothetical protein AN7350.2 [Aspergillus nidulans FGSC A4]
Length = 496
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED-----QRNNLN 92
++G + FD T GD+ +FA CG + +V +V DK T P+GF +V +E + +L+
Sbjct: 83 AHIGNLSFDATSGDISDLFADCG-VTNVRIVEDKLTKAPKGFGYVEFETVDGLKKALDLS 141
Query: 93 GAQILGRTIRVDHVAKYKKKE 113
GA + GR+IRV K+++
Sbjct: 142 GATLQGRSIRVSIAEPPKERD 162
>gi|426257491|ref|XP_004022360.1| PREDICTED: RNA-binding motif protein, X chromosome [Ovis aries]
Length = 391
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|425434339|ref|ZP_18814808.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|425450077|ref|ZP_18829909.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440751641|ref|ZP_20930844.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389676192|emb|CCH94745.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|389769258|emb|CCI05857.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440176134|gb|ELP55407.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
+YVG +PF++ + D++ VF + G+I V+L D+ TGK RGFAFV E L
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAAL 62
Query: 92 NGAQILGRTIRVDH 105
+GAQ +GR ++V+
Sbjct: 63 DGAQWMGRELKVNQ 76
>gi|449498359|ref|XP_004175818.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 2
[Taeniopygia guttata]
Length = 385
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|425461447|ref|ZP_18840925.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
gi|389825682|emb|CCI24355.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
Length = 97
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
+YVG +PF++ + D++ VF + G+I V+L D+ TGK RGFAFV E L
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAAL 62
Query: 92 NGAQILGRTIRVDH 105
+GAQ +GR ++V+
Sbjct: 63 DGAQWMGRELKVNQ 76
>gi|378734179|gb|EHY60638.1| hypothetical protein HMPREF1120_08590 [Exophiala dermatitidis
NIH/UT8656]
Length = 455
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN----- 89
+A ++VGG+ D TE D + FAQ G ++D L+ DK TG+PRGF FV ++
Sbjct: 82 TAKIFVGGVSQDATEEDFESFFAQFGRVIDATLMMDKDTGRPRGFGFVTFDSDAAVERCL 141
Query: 90 NLNGAQILGRTIRV 103
+ +ILG+ I V
Sbjct: 142 EYHPLEILGKPIEV 155
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 34/52 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN 89
+++GG+ ++ T+ L F+Q GE+ + ++RD TG+ RGF F+ ++D +
Sbjct: 1 MFIGGLNWETTDQSLHDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKT 52
>gi|291401898|ref|XP_002717345.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
gi|291408303|ref|XP_002720376.1| PREDICTED: RNA binding motif protein, X-linked [Oryctolagus
cuniculus]
Length = 391
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|395546030|ref|XP_003774897.1| PREDICTED: RNA-binding motif protein, X chromosome [Sarcophilus
harrisii]
Length = 413
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ + E L AVF + G IV+V L++D+ T K RGFAF+ +E D ++
Sbjct: 29 LFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPADAKDAARDM 88
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G++I+V+ K
Sbjct: 89 NGKLLDGKSIKVEQATK 105
>gi|158258156|dbj|BAF85051.1| unnamed protein product [Homo sapiens]
Length = 425
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 268 IRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGY 327
Query: 82 VAYEDQRN-----NLNGAQILGRTIRV 103
V +E+ + LN ++++GR +RV
Sbjct: 328 VLFENTDSVHLALKLNNSELMGRKLRV 354
>gi|259483295|tpe|CBF78566.1| TPA: translation initiation factor 4B (AFU_orthologue;
AFUA_2G16400) [Aspergillus nidulans FGSC A4]
Length = 497
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED-----QRNNLN 92
++G + FD T GD+ +FA CG + +V +V DK T P+GF +V +E + +L+
Sbjct: 84 AHIGNLSFDATSGDISDLFADCG-VTNVRIVEDKLTKAPKGFGYVEFETVDGLKKALDLS 142
Query: 93 GAQILGRTIRVDHVAKYKKKE 113
GA + GR+IRV K+++
Sbjct: 143 GATLQGRSIRVSIAEPPKERD 163
>gi|324564529|gb|ADY49874.1| Cleavage stimulation factor subunit 2 tau variant, partial [Ascaris
suum]
Length = 82
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
++VG +P+ E D+ F Q G +V+V +V D+ TG+PRGF F +E + ++
Sbjct: 5 IFVGNLPYSAREEDIADFFGQVGSVVNVRIVFDRETGRPRGFGFCEFETEDAAERAVGSM 64
Query: 92 NGAQILGRTIRVD 104
N A +GR IRVD
Sbjct: 65 NNADFMGRQIRVD 77
>gi|209155104|gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 167
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +++D+ T + RGF FV +E D
Sbjct: 3 DEGKLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 63 MLAMNGKSLDGRQIRVDQAGK 83
>gi|158340529|ref|YP_001521523.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310770|gb|ABW32384.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 91
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 14/77 (18%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV----------AYEDQ 87
+YVG + +++ + DL A+F++ GE+ +V+L +D+ TGK RGFAFV A ED
Sbjct: 3 IYVGNLSYEVAQEDLRAIFSEYGEVTNVHLPKDRETGKLRGFAFVDLGNDADEVKAIED- 61
Query: 88 RNNLNGAQILGRTIRVD 104
L+GA+ +GR+++V+
Sbjct: 62 ---LDGAEWMGRSLKVN 75
>gi|4104336|gb|AAD01997.1| heterogeneous nuclear ribonucleoprotein G [Macropus eugenii]
Length = 394
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ + E L AVF + G IV+V L++D+ T K RGFAF+ +E D ++
Sbjct: 10 LFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G++I+V+ K
Sbjct: 70 NGKLLDGKSIKVEQATK 86
>gi|20809545|gb|AAH29451.1| RNA binding motif protein 34 [Homo sapiens]
gi|312151154|gb|ADQ32089.1| RNA binding motif protein 34 [synthetic construct]
Length = 425
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 268 IRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGY 327
Query: 82 VAYEDQRN-----NLNGAQILGRTIRV 103
V +E+ + LN ++++GR +RV
Sbjct: 328 VLFENTDSVHLALKLNNSELMGRKLRV 354
>gi|427708129|ref|YP_007050506.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427360634|gb|AFY43356.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 99
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY-EDQRNN-----L 91
+YVG + + TE DL AVFA GE+ V L D+ TG+ RGFAFV ED + N L
Sbjct: 3 IYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMEEDAQENAAITEL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GR +RV+
Sbjct: 63 DGAEWMGRQLRVN 75
>gi|301769089|ref|XP_002919961.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Ailuropoda melanoleuca]
gi|281352732|gb|EFB28316.1| hypothetical protein PANDA_008640 [Ailuropoda melanoleuca]
Length = 391
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|238859597|ref|NP_055829.2| RNA-binding protein 34 isoform 1 [Homo sapiens]
gi|57013870|sp|P42696.2|RBM34_HUMAN RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|119590412|gb|EAW70006.1| RNA binding motif protein 34, isoform CRA_b [Homo sapiens]
gi|306921633|dbj|BAJ17896.1| RNA binding motif protein 34 [synthetic construct]
Length = 430
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 273 IRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGY 332
Query: 82 VAYEDQRN-----NLNGAQILGRTIRV 103
V +E+ + LN ++++GR +RV
Sbjct: 333 VLFENTDSVHLALKLNNSELMGRKLRV 359
>gi|3256007|emb|CAA80599.1| hnRNP G protein [Homo sapiens]
Length = 391
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|387913868|gb|AFK10543.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGGI F+ E L VFA+ G++ +V ++R++ T + +G FV +E D
Sbjct: 3 DEGKLFVGGINFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGLGFVTFENPDDARDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVDH K
Sbjct: 63 LAGMNGKTVDGRQIRVDHAGK 83
>gi|327286673|ref|XP_003228054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Anolis carolinensis]
Length = 374
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|355715855|gb|AES05424.1| RNA binding motif protein, X-linked [Mustela putorius furo]
Length = 392
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 11 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 70
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 71 NGKSLDGKAIKVEQATK 87
>gi|327286671|ref|XP_003228053.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 1
[Anolis carolinensis]
Length = 384
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|219111803|ref|XP_002177653.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410538|gb|EEC50467.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 76
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
V+VG + F+ TE L VF+ G ++ V LV D TGKPRGFAFV + D + N+
Sbjct: 1 VFVGNLAFNTTEEQLQQVFSDIGRVIHVRLVTDVDTGKPRGFAFVEFSDAQAALSAIRNM 60
Query: 92 NGAQILGRTIRVD 104
N ++ GR IRV+
Sbjct: 61 NDYELNGRRIRVN 73
>gi|126325323|ref|XP_001367196.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Monodelphis domestica]
Length = 388
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ + E L AVF + G IV+V L++D+ T K RGFAF+ +E D ++
Sbjct: 10 LFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETRKSRGFAFITFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G++I+V+ K
Sbjct: 70 NGKLLDGKSIKVEQATK 86
>gi|341882525|gb|EGT38460.1| hypothetical protein CAEBREN_15135 [Caenorhabditis brenneri]
Length = 84
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
VYVG P+ +E ++ + F+ G + +V +V D+ TG+PRGFAFV + D+ N L
Sbjct: 8 VYVGNAPYQTSEDEIGSFFSNVGHVTNVRIVCDRETGRPRGFAFVEFADEAGAQRAVNEL 67
Query: 92 NGAQILGRTIRVDHVAK 108
NGA GR +RV+ ++
Sbjct: 68 NGADFNGRQLRVNLASR 84
>gi|302683536|ref|XP_003031449.1| hypothetical protein SCHCODRAFT_257523 [Schizophyllum commune H4-8]
gi|300105141|gb|EFI96546.1| hypothetical protein SCHCODRAFT_257523 [Schizophyllum commune H4-8]
Length = 324
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN----- 89
S V+VG +P++++E +L+ VF GE+ LV D+ TGKPRG+ F + D
Sbjct: 5 SKVVFVGNVPYNMSEDELIDVFKNVGEVAGFRLVFDRETGKPRGYGFCEFTDHDTALSAV 64
Query: 90 -NLNGAQILGRTIRVD 104
NLN ++ GR +R+D
Sbjct: 65 RNLNNIEVKGRNLRID 80
>gi|82248148|sp|Q9PTX2.1|CIRBP_RANCA RecName: Full=Cold-inducible RNA-binding protein; Short=BFCIRP;
AltName: Full=Glycine-rich RNA-binding protein CIRP
gi|6682989|dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MAGMNGKTVDGRQIRVDQAGK 84
>gi|346716298|ref|NP_001231025.1| heterogeneous nuclear ribonucleoprotein G [Sus scrofa]
Length = 390
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|88813641|ref|ZP_01128871.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88789097|gb|EAR20234.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 96
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN-----LN 92
+YVG +PF +E ++ +FAQ GE+ +V L+ D+ TG+PRGF FV + LN
Sbjct: 5 IYVGNLPFTASEDEIRDLFAQYGEVNEVRLITDRDTGRPRGFGFVRMAPADADAAIEALN 64
Query: 93 GAQILGRTIRVDH 105
G ++ GR +R++
Sbjct: 65 GTELDGRALRINE 77
>gi|159474538|ref|XP_001695382.1| nuclear cap-binding protein [Chlamydomonas reinhardtii]
gi|158275865|gb|EDP01640.1| nuclear cap-binding protein [Chlamydomonas reinhardtii]
Length = 143
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
+YVGG+ + E L A F GEI +VN+ D TG RGF FV YE++ +N+
Sbjct: 19 LYVGGLEESVNEATLHAAFLPFGEIKEVNMPIDHATGTHRGFGFVEYEEKDDAAAAIDNM 78
Query: 92 NGAQILGRTIRVDHVAKYKKK 112
N A++ GR ++V++ K K
Sbjct: 79 NNAELFGRVLKVNYAQPMKIK 99
>gi|56699409|ref|NP_002130.2| RNA-binding motif protein, X chromosome isoform 1 [Homo sapiens]
gi|206725512|ref|NP_001128678.1| RNA-binding motif protein, X chromosome [Pan troglodytes]
gi|74008547|ref|XP_866434.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G isoform 6
[Canis lupus familiaris]
gi|149755726|ref|XP_001489601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Equus
caballus]
gi|397482297|ref|XP_003812367.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Pan
paniscus]
gi|410989483|ref|XP_004000991.1| PREDICTED: RNA-binding motif protein, X chromosome [Felis catus]
gi|23503093|sp|P38159.3|RBMX_HUMAN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Glycoprotein p43; AltName: Full=Heterogeneous
nuclear ribonucleoprotein G; Short=hnRNP G; Contains:
RecName: Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|160395526|sp|A5A6M3.1|RBMX_PANTR RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|13938569|gb|AAH07435.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|14279350|gb|AAK58567.1| RBMX [Homo sapiens]
gi|16306856|gb|AAH06550.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|39545947|gb|AAR28036.1| heterogeneous nuclear ribonucleoprotein G [Homo sapiens]
gi|119608859|gb|EAW88453.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608860|gb|EAW88454.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608861|gb|EAW88455.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608863|gb|EAW88457.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|123993071|gb|ABM84137.1| RNA binding motif protein, X-linked [synthetic construct]
gi|124000061|gb|ABM87539.1| RNA binding motif protein, X-linked [synthetic construct]
gi|146741480|dbj|BAF62396.1| RNA binding motif protein, X-linked [Pan troglodytes verus]
gi|410266422|gb|JAA21177.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266426|gb|JAA21179.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266428|gb|JAA21180.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266430|gb|JAA21181.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266432|gb|JAA21182.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266434|gb|JAA21183.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266436|gb|JAA21184.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348962|gb|JAA41085.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348964|gb|JAA41086.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348966|gb|JAA41087.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348968|gb|JAA41088.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348970|gb|JAA41089.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348972|gb|JAA41090.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348974|gb|JAA41091.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348976|gb|JAA41092.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|285012962|ref|NP_001165510.1| heterogeneous nuclear ribonucleoprotein G [Bos taurus]
gi|348557903|ref|XP_003464758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Cavia
porcellus]
gi|284080621|gb|ADB77884.1| Rbmx [Bos taurus]
gi|296471213|tpg|DAA13328.1| TPA: RNA binding motif protein, X-linked isoform 1 [Bos taurus]
gi|440895247|gb|ELR47495.1| Heterogeneous nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 391
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|336464258|gb|EGO52498.1| hypothetical protein NEUTE1DRAFT_72168 [Neurospora tetrasperma FGSC
2508]
Length = 321
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN--- 89
+ S V+VG IP+ LTE + +F+ G +++ LV D+ TG+P+GF F + D +
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 90 ---NLNGAQILGRTIRVDH 105
NLN +I+GR +RVD
Sbjct: 65 AVRNLNDHEIMGRKLRVDF 83
>gi|422304104|ref|ZP_16391453.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
gi|389790787|emb|CCI13324.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
Length = 97
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
+YVG +PF++ + D++ VF + G+I V+L D+ TGK RGFAFV E L
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEEAKAIAAL 62
Query: 92 NGAQILGRTIRVDH 105
+GAQ +GR ++V+
Sbjct: 63 DGAQWMGRELKVNQ 76
>gi|351715732|gb|EHB18651.1| Heterogeneous nuclear ribonucleoprotein G [Heterocephalus glaber]
Length = 356
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|367052583|ref|XP_003656670.1| hypothetical protein THITE_2121633 [Thielavia terrestris NRRL 8126]
gi|347003935|gb|AEO70334.1| hypothetical protein THITE_2121633 [Thielavia terrestris NRRL 8126]
Length = 332
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN--- 89
+ S V+VG IP+ LTE + +F+ G +++ LV D+ TG+P+GF F + D +
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITELFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 90 ---NLNGAQILGRTIRVDH 105
NLN +++GR +RVD
Sbjct: 65 AVRNLNDHEVMGRKLRVDF 83
>gi|410227798|gb|JAA11118.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227802|gb|JAA11120.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227804|gb|JAA11121.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227806|gb|JAA11122.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227808|gb|JAA11123.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227810|gb|JAA11124.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227812|gb|JAA11125.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|344297709|ref|XP_003420539.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Loxodonta
africana]
Length = 391
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|220903771|ref|YP_002479083.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868070|gb|ACL48405.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 88
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED-----QRNNLN 92
+YVG + + T+GD+ ++F+ G+++ VNL+ D+ TG+ RGF FV ED + L+
Sbjct: 5 IYVGNLSWSTTQGDVESLFSAFGQVLSVNLISDRETGRARGFGFVEMEDDDAANAISALD 64
Query: 93 GAQILGRTIRVD 104
G ++ GR++RV+
Sbjct: 65 GKEVDGRSLRVN 76
>gi|390474384|ref|XP_002757703.2| PREDICTED: RNA-binding motif protein, X chromosome-like, partial
[Callithrix jacchus]
Length = 391
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|17064758|gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana]
Length = 329
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV---AYEDQRNNL--- 91
+YVG +P+ +T +L +F + G +VDV +V DK T + RGF FV + E+ + +
Sbjct: 118 LYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKGAMQMF 177
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEETRQR 122
N +QI GRT++V+ + E E T+ R
Sbjct: 178 NSSQIGGRTVKVNFPEVPRGGENEVMRTKIR 208
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 32 YKDSAY-VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN- 89
Y DS + VY G + +DLT L F ++ ++ ++ TG+ RGF F+++E N
Sbjct: 214 YVDSPHKVYAGNLGWDLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENV 273
Query: 90 -----NLNGAQILGRTIRVDHVAKYKK 111
+NG ++ GR +R++ ++ +K
Sbjct: 274 QSALATMNGVEVEGRALRLNLASEREK 300
>gi|402217675|gb|EJT97754.1| splicing factor CC1-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 640
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 30 AKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---ED 86
A S +YVG + F+LTE D+ VF GE+ V+L RD TG+ +GFAFV Y ED
Sbjct: 403 APPPGSMQLYVGSLHFNLTESDVKQVFEPFGELEFVDLHRDPLTGRSKGFAFVQYKRSED 462
Query: 87 QR---NNLNGAQILGRTIRVDHV 106
R +++G + GR ++V+ V
Sbjct: 463 ARMALQSMDGFDLAGRQLKVNTV 485
>gi|410308290|gb|JAA32745.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308292|gb|JAA32746.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308294|gb|JAA32747.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308296|gb|JAA32748.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308298|gb|JAA32749.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308300|gb|JAA32750.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308302|gb|JAA32751.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308304|gb|JAA32752.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|380811822|gb|AFE77786.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383417591|gb|AFH32009.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 289
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|355757746|gb|EHH61271.1| hypothetical protein EGM_19240 [Macaca fascicularis]
Length = 391
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|350296344|gb|EGZ77321.1| hypothetical protein NEUTE2DRAFT_78674 [Neurospora tetrasperma FGSC
2509]
Length = 321
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN--- 89
+ S V+VG IP+ LTE + +F+ G +++ LV D+ TG+P+GF F + D +
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 90 ---NLNGAQILGRTIRVDH 105
NLN +I+GR +RVD
Sbjct: 65 AVRNLNDHEIMGRKLRVDF 83
>gi|296236539|ref|XP_002763369.1| PREDICTED: RNA-binding motif protein, X chromosome [Callithrix
jacchus]
Length = 289
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|402911572|ref|XP_003918396.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
gi|75076694|sp|Q4R7F0.1|RBMX_MACFA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|67969238|dbj|BAE00972.1| unnamed protein product [Macaca fascicularis]
gi|380813174|gb|AFE78461.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813176|gb|AFE78462.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813178|gb|AFE78463.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813180|gb|AFE78464.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813182|gb|AFE78465.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383411873|gb|AFH29150.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418689|gb|AFH32558.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418691|gb|AFH32559.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418693|gb|AFH32560.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418695|gb|AFH32561.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418697|gb|AFH32562.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418699|gb|AFH32563.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947302|gb|AFI37256.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947304|gb|AFI37257.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947306|gb|AFI37258.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947308|gb|AFI37259.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947310|gb|AFI37260.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947312|gb|AFI37261.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947314|gb|AFI37262.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 391
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|6755296|ref|NP_035382.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|262231769|ref|NP_001160095.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|81917893|sp|Q9WV02.1|RBMX_MOUSE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|5579011|emb|CAB51362.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|13277600|gb|AAH03710.1| RNA binding motif protein, X chromosome [Mus musculus]
gi|74149379|dbj|BAE22448.1| unnamed protein product [Mus musculus]
gi|148710228|gb|EDL42174.1| RNA binding motif protein, X chromosome, isoform CRA_e [Mus
musculus]
Length = 391
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|432099499|gb|ELK28647.1| Heterogeneous nuclear ribonucleoprotein G-like 1 [Myotis davidii]
Length = 535
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 179 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 238
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 239 NGKSLDGKAIKVEQATK 255
>gi|164427135|ref|XP_964488.2| hypothetical protein NCU03311 [Neurospora crassa OR74A]
gi|157071622|gb|EAA35252.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 322
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN--- 89
+ S V+VG IP+ LTE + +F+ G +++ LV D+ TG+P+GF F + D +
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 90 ---NLNGAQILGRTIRVDH 105
NLN +I+GR +RVD
Sbjct: 65 AVRNLNDHEIMGRKLRVDF 83
>gi|403300126|ref|XP_003940808.1| PREDICTED: RNA binding motif protein, X-linked-like-1-like, partial
[Saimiri boliviensis boliviensis]
Length = 268
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|198438021|ref|XP_002129706.1| PREDICTED: similar to cold inducible RNA binding protein [Ciona
intestinalis]
Length = 469
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------ 89
A +++GG+ D +E DL F G+I V ++RD+ T RGFAF+++E Q +
Sbjct: 8 ARIFIGGLDLDCSEQDLEKAFGMFGDISQVMVLRDRETNVSRGFAFMSFESQDSADEAIR 67
Query: 90 NLNGAQILGRTIRV 103
++G +I+GR + V
Sbjct: 68 RMHGVEIMGRCVTV 81
>gi|434393135|ref|YP_007128082.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428264976|gb|AFZ30922.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 103
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------QRNNL 91
+YVG + + +T+ D+LAVF + G + V + D+ TG+PRGF FV L
Sbjct: 3 IYVGNLSYQVTQEDILAVFGEYGNVKQVQVPTDRETGRPRGFCFVEMSSEAEETAAIEAL 62
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEETRQR 122
+GA+ +GR+++V+ K K ED+ R R
Sbjct: 63 DGAEWMGRSLKVN-----KAKPREDKGNRYR 88
>gi|343959058|dbj|BAK63384.1| heterogeneous nuclear ribonucleoprotein G [Pan troglodytes]
Length = 391
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|149015800|gb|EDL75124.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_c [Rattus norvegicus]
Length = 289
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|5579009|emb|CAB51361.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|74228065|dbj|BAE37998.1| unnamed protein product [Mus musculus]
gi|148710226|gb|EDL42172.1| RNA binding motif protein, X chromosome, isoform CRA_c [Mus
musculus]
Length = 289
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|193215305|ref|YP_001996504.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
gi|193088782|gb|ACF14057.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
Length = 104
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
+YVG + + LTE +L VF++ GE+ N++ DK +GK RGF FV ++ + L
Sbjct: 3 IYVGNLSYTLTENELRDVFSEYGEVASANIIVDKYSGKSRGFGFVDMPNEADAEQAIEAL 62
Query: 92 NGAQILGRTIRVD 104
NG+Q+ GR+++V+
Sbjct: 63 NGSQLDGRSLKVN 75
>gi|46105484|ref|XP_380546.1| hypothetical protein FG00370.1 [Gibberella zeae PH-1]
Length = 294
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+ LTE + +F+ G++ LV D TG+P+GF F Y D + NL
Sbjct: 10 VFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 92 NGAQILGRTIRVDH 105
N +I+GR +RVD
Sbjct: 70 NDHEIMGRKLRVDF 83
>gi|428210908|ref|YP_007084052.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|427999289|gb|AFY80132.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 109
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
+YVG + +D+TE DL +VFA+ G + VNL D+ TG+PRGF FV + L
Sbjct: 3 IYVGNLSYDVTEQDLNSVFAEYGTVKRVNLPTDRETGRPRGFGFVEMDTDAEETAAIEAL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GR ++V+
Sbjct: 63 DGAEWMGRDLKVN 75
>gi|282896900|ref|ZP_06304906.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198309|gb|EFA73199.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 92
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 9/83 (10%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV-----AYEDQR-NNL 91
+Y+G + + TE DL +VFA GE+ V L D+ TGK RGFAFV A ED + L
Sbjct: 3 IYIGNLSYRATEADLKSVFADYGEVKRVVLPTDRETGKMRGFAFVEMIEDAQEDAAISEL 62
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
+GA+ +GR +RV+ K K KEE
Sbjct: 63 DGAEWMGRQLRVN---KAKPKEE 82
>gi|145341802|ref|XP_001415992.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576215|gb|ABO94284.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 86
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V++G IP+D TE L VF + G + ++ LV D+ TGK +G+ FV ++D N+
Sbjct: 6 VFIGNIPYDATETSLRDVFGEVGPVRELRLVADRDTGKLKGYGFVEFDDYATAMSAVRNV 65
Query: 92 NGAQILGRTIRVDHVAKYK 110
NG + GR +RVDH K
Sbjct: 66 NGREYNGRQLRVDHAETMK 84
>gi|417410380|gb|JAA51664.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase,
partial [Desmodus rotundus]
Length = 398
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 11 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 70
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 71 NGKSLDGKAIKVEQATK 87
>gi|403256025|ref|XP_003920702.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Saimiri
boliviensis boliviensis]
Length = 391
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|332812270|ref|XP_514284.3| PREDICTED: RNA-binding protein 34 isoform 2 [Pan troglodytes]
gi|410225796|gb|JAA10117.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410267564|gb|JAA21748.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410289770|gb|JAA23485.1| RNA binding motif protein 34 [Pan troglodytes]
Length = 430
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 273 IRVDLASETSSRDKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGY 332
Query: 82 VAYEDQRN-----NLNGAQILGRTIRV 103
V +E+ + LN ++++GR +RV
Sbjct: 333 VLFENTDSVHLALKLNNSELMGRKLRV 359
>gi|158339703|ref|YP_001520710.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158309944|gb|ABW31560.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 89
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
+YVG + FD TE DL AVFA+ G + V + D+ TG+ RGFAFV + + L
Sbjct: 3 IYVGNLSFDATEQDLNAVFAEYGTVKQVKMPTDRETGRKRGFAFVEMGNDAEEAKAIDEL 62
Query: 92 NGAQILGRTIRVD 104
GA+ +GRT++V+
Sbjct: 63 EGAEWMGRTLKVN 75
>gi|408400674|gb|EKJ79751.1| hypothetical protein FPSE_00031 [Fusarium pseudograminearum CS3096]
Length = 295
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+ LTE + +F+ G++ LV D TG+P+GF F Y D + NL
Sbjct: 10 VFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 92 NGAQILGRTIRVDH 105
N +I+GR +RVD
Sbjct: 70 NDHEIMGRKLRVDF 83
>gi|448098292|ref|XP_004198889.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359380311|emb|CCE82552.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLN 92
KD +++GG+ +D +E L+ F Q GE+VD ++RD TGK RGF F+ ++D ++
Sbjct: 158 KDHGKMFIGGLNWDTSEQGLVDYFTQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKS--- 214
Query: 93 GAQILGRTIRVDHV 106
+ I+ DH+
Sbjct: 215 ----VEEVIKRDHI 224
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE 85
++VGGI + E + F+Q G I+D L+ DK TG+ RGF F+ Y+
Sbjct: 247 IFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYD 294
>gi|148237346|ref|NP_001084981.1| RNA-binding motif protein, X chromosome [Xenopus laevis]
gi|82236857|sp|Q6IRQ4.1|RBMX_XENLA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|47682580|gb|AAH70649.1| MGC82187 protein [Xenopus laevis]
Length = 370
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G +V+V L++D+ T K RGFAFV +E D L
Sbjct: 10 LFIGGLNTETNEKALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADAKDAAREL 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKALDGKPIKVEQATK 86
>gi|428768452|ref|YP_007160242.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC 10605]
gi|428682731|gb|AFZ52198.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC 10605]
Length = 101
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
+YVG +P+++T DL+ VFA+ G + V++ D+ TG+ RGFAFV E+ + L
Sbjct: 3 IYVGNLPYEVTSEDLMEVFAEYGTVSRVHIPTDRETGRMRGFAFVEMENDNQEESAIDAL 62
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEETR 120
+GA+ + R +RV+ K K +E+ D R
Sbjct: 63 DGAEWMKRELRVN---KAKPREKRDSFNR 88
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 13/110 (11%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY------ED 86
++S + V + F T DL +F + G+++D+ + RD TG PRGFAFV Y +D
Sbjct: 13 RESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQD 72
Query: 87 QRNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREE----RGVCRA 132
+ L+G + GR + V AKY E+ R R+ EE RG CR+
Sbjct: 73 AIDGLDGMRFDGRALMV-QFAKYGPNAEKIH--RGRITEENPKPRGRCRS 119
>gi|332236264|ref|XP_003267324.1| PREDICTED: RNA-binding protein 34 [Nomascus leucogenys]
Length = 430
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 273 IRVDLACETSSRDKRSVFVGNLPYKVEESAVEKHFLDCGSILAVRIVRDKMTGIGKGFGY 332
Query: 82 VAYEDQRN-----NLNGAQILGRTIRV 103
V +E+ + LN ++++GR +RV
Sbjct: 333 VLFENTDSVHLALKLNNSELMGRKLRV 359
>gi|209154454|gb|ACI33459.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 206
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L F++ G I V++VRD+ T + RGF FV +E D
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 63 MAAMNGKSVDGRMIRVDEAGK 83
>gi|426334252|ref|XP_004028672.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Gorilla
gorilla gorilla]
Length = 1500
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 1343 IRVDRASETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGY 1402
Query: 82 VAYEDQRN-----NLNGAQILGRTIRV 103
V +E+ + LN ++++GR +RV
Sbjct: 1403 VLFENTDSVHLALKLNNSELMGRKLRV 1429
>gi|110638796|ref|YP_679005.1| RNA binding protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281477|gb|ABG59663.1| RNA binding protein [Cytophaga hutchinsonii ATCC 33406]
Length = 143
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
++VG +PF L E +L F + GE+ V ++ DK TG+ +GF FV D + L
Sbjct: 3 IFVGSLPFSLEENELREFFEEYGEVSSVKIISDKFTGRSKGFGFVEMPDDAAAQKAIDEL 62
Query: 92 NGAQILGRTIRVD 104
NGA++ GRTI V+
Sbjct: 63 NGAEVNGRTIVVN 75
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY----EDQR--NNL 91
+YVG + +D+T+ DL VFA+ G + V L D+ TG+PRGF FV E+Q+ L
Sbjct: 3 IYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSENEEQKAIEAL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GR I+V+
Sbjct: 63 DGAEWMGRDIKVN 75
>gi|395860828|ref|XP_003802706.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Otolemur
garnettii]
Length = 391
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAF+ +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|354475287|ref|XP_003499861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Cricetulus griseus]
Length = 289
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|317154439|ref|YP_004122487.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944690|gb|ADU63741.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED-----QRNNLN 92
+YVG +P+ TE ++ A F GE+ V L+ D+ TG+PRGF FV +D NL+
Sbjct: 5 IYVGNLPWSATEDEIRAAFGAYGEVTSVKLIEDRETGRPRGFGFVEMDDAGALEAIENLD 64
Query: 93 GAQILGRTIRVDH 105
G GR I+V+
Sbjct: 65 GKDFGGRNIKVNE 77
>gi|75908205|ref|YP_322501.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75701930|gb|ABA21606.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 109
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 9/83 (10%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
+Y+G + + +TE DL FA+ G++ V L D+ TG+PRGFAFV E + L
Sbjct: 3 IYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEAL 62
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
+GA+ +GR ++V+ K K +EE
Sbjct: 63 DGAEWMGRDLKVN---KAKPREE 82
>gi|410907089|ref|XP_003967024.1| PREDICTED: la-related protein 7-like [Takifugu rubripes]
Length = 519
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNG 93
DS VYV +P D+T G + VFA+CG +V V++ R K +G P+GFAFV +E +
Sbjct: 116 DSRTVYVELLPKDVTHGWIERVFAKCGTVVYVSVPRYKSSGDPKGFAFVEFEKEEEARQA 175
Query: 94 AQIL 97
++L
Sbjct: 176 IEVL 179
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------QRNNL 91
++VG +PFD E + +F + G I+ + L D +G+P+GF +V Y N L
Sbjct: 406 LFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNEL 465
Query: 92 NGAQILGRTIRVDH 105
GA +LGR +R+D
Sbjct: 466 QGADLLGRPVRLDF 479
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNL--- 91
SA ++VG + +++ E L + F GE+ V ++ ++ TG+ RGF +V Y + +
Sbjct: 294 SANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAF 353
Query: 92 ---NGAQILGRTIRVDHV 106
GA+I GR I +D+
Sbjct: 354 EAKKGAEIDGRVINLDYA 371
>gi|449437482|ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449528229|ref|XP_004171108.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY------EDQRNNL 91
+Y+G +P+ +T L VFA+ G +V V ++ DK T + RGFAFV ++
Sbjct: 117 LYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRMF 176
Query: 92 NGAQILGRTIRVD 104
+G+QI GRT+RV+
Sbjct: 177 DGSQIGGRTVRVN 189
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 11/91 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNL--- 91
+YVG + F+LTE D+ VF G++ V+L RD TG+ +G+AFV Y ED + L
Sbjct: 137 LYVGSLHFNLTEADIKQVFEPFGDLEFVDLHRDSTTGRSKGYAFVQYKRPEDAKMALEQM 196
Query: 92 NGAQILGRTIRVDHV-----AKYKKKEEEDE 117
+G ++ GRT+RV+ V A+Y +++ +E
Sbjct: 197 DGFELAGRTLRVNTVHEKGTARYTQQDSLEE 227
>gi|146197835|dbj|BAF57630.1| TLS-associated protein [Dugesia japonica]
Length = 201
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR---- 88
+ S +YVG IP DL +L +F + G IV L D +G P+GFAFV +ED R
Sbjct: 3 RSSTTIYVGNIPEDLRRDELKRIFGRYGNIVAATLPVDYYSGIPKGFAFVQFEDIRDAEE 62
Query: 89 --NNLNGAQILGRTIRVDHVAKYKKKEEE 115
+ L G +I R++R++ KK +E
Sbjct: 63 SFDRLQGYRIGKRSLRLEFATGTKKTPDE 91
>gi|426255548|ref|XP_004021410.1| PREDICTED: RNA-binding protein 34 [Ovis aries]
Length = 427
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 25 DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY 84
D + +D V+VG +P+ + E + F CG +V V +VRD+ TG RGF +V +
Sbjct: 275 DLATETSSRDKRSVFVGNLPYKVEESAVEKHFLACGNVVAVRIVRDQVTGVGRGFGYVLF 334
Query: 85 EDQ-----RNNLNGAQILGRTIRVD-HVAKYKKKEEEDEETRQRMREERGVCRAFQRGEC 138
E+ LN ++++GR +RV V K K K+ + + + ++G+ A + +
Sbjct: 335 ENTDAVHLALKLNNSELMGRKLRVMRSVHKEKLKQNSNPSLKNVSKPKQGLNFASKSAQN 394
Query: 139 TRG 141
++G
Sbjct: 395 SKG 397
>gi|336261134|ref|XP_003345358.1| hypothetical protein SMAC_04589 [Sordaria macrospora k-hell]
gi|380090609|emb|CCC11604.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 321
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN--- 89
+ S V+VG IP+ LTE + +F+ G +++ LV D+ TG+P+GF F + D +
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 90 ---NLNGAQILGRTIRVDH 105
NLN +I+GR +RVD
Sbjct: 65 AVRNLNDHEIMGRKLRVDF 83
>gi|294054726|ref|YP_003548384.1| RNP-1 like RNA-binding protein [Coraliomargarita akajimensis DSM
45221]
gi|293614059|gb|ADE54214.1| RNP-1 like RNA-binding protein [Coraliomargarita akajimensis DSM
45221]
Length = 147
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE--DQRN----NL 91
+YVG + FD T+ DL +F+ G + DV +++D+ +G+PRGFAFV+ E ++ N L
Sbjct: 1 MYVGNLSFDATQEDLEGLFSAHGTVTDVFILKDRESGRPRGFAFVSMETPEEMNAAIEAL 60
Query: 92 NGAQILGRTIRVD 104
NG + +GR + ++
Sbjct: 61 NGEEFMGRNLTIN 73
>gi|148710225|gb|EDL42171.1| RNA binding motif protein, X chromosome, isoform CRA_b [Mus
musculus]
Length = 301
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|303328239|ref|ZP_07358677.1| RNA-binding protein [Desulfovibrio sp. 3_1_syn3]
gi|345893613|ref|ZP_08844407.1| hypothetical protein HMPREF1022_03067 [Desulfovibrio sp.
6_1_46AFAA]
gi|302861569|gb|EFL84505.1| RNA-binding protein [Desulfovibrio sp. 3_1_syn3]
gi|345046026|gb|EGW49923.1| hypothetical protein HMPREF1022_03067 [Desulfovibrio sp.
6_1_46AFAA]
Length = 87
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE--DQRN---NLN 92
+YVG + F T+ L +F+Q G + VNL+ D+ TG+PRGF FV E D RN LN
Sbjct: 5 IYVGNLSFSSTQAGLENLFSQYGTPLSVNLIMDRVTGRPRGFGFVEMEEDDARNAIAGLN 64
Query: 93 GAQILGRTIRVDHVAK 108
G + GRT+RV+ K
Sbjct: 65 GVEFEGRTLRVNEAEK 80
>gi|297711157|ref|XP_002832216.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Pongo abelii]
Length = 438
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 57 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 116
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 117 NGKSLDGKAIKVEQATK 133
>gi|440901028|gb|ELR52037.1| RNA-binding protein 34 [Bos grunniens mutus]
Length = 428
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 25 DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY 84
D + +D V+VG +P+ + E + F CG +V V +VRD+ TG RGF +V +
Sbjct: 276 DLATETSSRDKRSVFVGNLPYKVEESAVEKHFLACGNVVAVRIVRDQVTGVGRGFGYVLF 335
Query: 85 EDQ-----RNNLNGAQILGRTIRVD-HVAKYKKKEEEDEETRQRMREERGVCRAFQRGEC 138
E+ LN ++++GR +RV V K K K+ + + + ++G+ A + +
Sbjct: 336 ENTDAVHLALKLNNSELMGRKLRVMRSVHKEKLKQNSNLSLKNVSKPKQGLNFASKSAQN 395
Query: 139 TRG 141
++G
Sbjct: 396 SKG 398
>gi|330847367|gb|AEC46649.1| cold inducible RNA binding protein transcript variant 1 [Sus
scrofa]
Length = 172
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
++VGG+ FD E L VF++ G+I +V +V+D+ T + R F FV +E D +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMAM 67
Query: 92 NGAQILGRTIRVDHVAK 108
NG + GR IRVD K
Sbjct: 68 NGKSVDGRQIRVDQAGK 84
>gi|427776735|gb|JAA53819.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase
[Rhipicephalus pulchellus]
Length = 306
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
VYVGG+ ++ E L A F G++VDV + D T K RGFAFV +E +N+
Sbjct: 9 VYVGGLAEEVDEKVLHAAFIPFGDLVDVQIPLDYETEKHRGFAFVEFESAEDAAAAIDNM 68
Query: 92 NGAQILGRTIRVDHVAKYKKKE 113
N +++ GRTIRV+ K KE
Sbjct: 69 NDSELFGRTIRVNIAKPMKIKE 90
>gi|354477196|ref|XP_003500808.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Cricetulus griseus]
gi|344244124|gb|EGW00228.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 388
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV++ L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|342874383|gb|EGU76397.1| hypothetical protein FOXB_13075 [Fusarium oxysporum Fo5176]
Length = 293
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+ LTE + +F+ G++ LV D TG+P+GF F Y D + NL
Sbjct: 10 VFVGNIPYGLTEEQITDIFSSAGKVERFRLVYDPETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 92 NGAQILGRTIRVDH 105
N +I+GR +RVD
Sbjct: 70 NDFEIMGRKLRVDF 83
>gi|320582005|gb|EFW96224.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Ogataea parapolymorpha DL-1]
Length = 156
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN---- 89
DS VY+G + + GDL + CG I + ++ DK TGKPRG+AFV +E
Sbjct: 25 DSRSVYLGNVDYSALPGDLKELLDDCGVINRITILYDKHTGKPRGYAFVEFETHEGAQKA 84
Query: 90 -NLNGAQILGRTIRV 103
+NG + GRT+ V
Sbjct: 85 VAMNGTEFRGRTLTV 99
>gi|119590411|gb|EAW70005.1| RNA binding motif protein 34, isoform CRA_a [Homo sapiens]
Length = 459
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 302 IRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGY 361
Query: 82 VAYEDQRN-----NLNGAQILGRTIRV 103
V +E+ + LN ++++GR +RV
Sbjct: 362 VLFENTDSVHLALKLNNSELMGRKLRV 388
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------QRNNL 91
++VG +PFD E + +F + G I+ + L D +G+P+GF +V Y N L
Sbjct: 398 LFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNEL 457
Query: 92 NGAQILGRTIRVDH 105
GA +LGR +R+D
Sbjct: 458 QGADLLGRPVRLDF 471
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNL--- 91
SA ++VG + +++ E L + F GE+ V ++ ++ TG+ RGF +V Y + +
Sbjct: 286 SANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAF 345
Query: 92 ---NGAQILGRTIRVDHV 106
GA+I GR I +D+
Sbjct: 346 EAKKGAEIDGRVINLDYA 363
>gi|83699420|ref|NP_033059.2| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|355390287|ref|NP_001239018.1| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|81916088|sp|Q91VM5.1|RMXL1_MOUSE RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
AltName: Full=RNA binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA binding motif
protein, X-linked-like-1, N-terminally processed
gi|15030328|gb|AAH11441.1| Rbmxrt protein [Mus musculus]
gi|26334797|dbj|BAC31099.1| unnamed protein product [Mus musculus]
gi|58476937|gb|AAH89350.1| RNA binding motif protein, X chromosome retrogene [Mus musculus]
Length = 388
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV++ L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|443478888|ref|ZP_21068579.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443015762|gb|ELS30586.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 109
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 9/85 (10%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
+YVG + +++TE DL AVF++ G+I V+L D+ +G+PRGFAFV +++ L
Sbjct: 3 IYVGNLSYEVTEDDLKAVFSEYGKITRVHLPIDRESGRPRGFAFVEMTEEKEEDAAIVAL 62
Query: 92 NGAQILGRTIRVDHVAKYKKKEEED 116
+ A+ +GR ++V+ K K +E D
Sbjct: 63 DEAEWMGRALKVN---KAKPRESSD 84
>gi|384483165|gb|EIE75345.1| hypothetical protein RO3G_00049 [Rhizopus delemar RA 99-880]
Length = 366
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 30 AKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN 89
AK +++ ++ GGI F+ T D+ F +CGEI DV + D+ TGK RGF + + Q
Sbjct: 133 AKTEENYTIWCGGISFEATADDVREFFGECGEIKDVRIRIDEATGKNRGFCHIDFATQEA 192
Query: 90 N-----LNGAQILGRTIRVD 104
L+G + LGR IR+D
Sbjct: 193 KDAAVALSGNEFLGRRIRID 212
>gi|410975075|ref|XP_003993961.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Felis
catus]
Length = 433
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 25 DASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY 84
D + +D V+VG +P+ + E + F CG IV V +VRD TG RGF +V +
Sbjct: 281 DLASETSSRDKRSVFVGNLPYKVEESAIEEHFLDCGSIVAVRIVRDPATGVGRGFGYVLF 340
Query: 85 EDQ-----RNNLNGAQILGRTIRV 103
E+ LN ++++GR +RV
Sbjct: 341 ENTDAVHLALKLNNSELMGRKLRV 364
>gi|308504932|ref|XP_003114649.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
gi|308258831|gb|EFP02784.1| hypothetical protein CRE_28335 [Caenorhabditis remanei]
Length = 150
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
VYVG +P+ TE ++ F+ G + +V +V D+ TG+PRGFAFV Y ++ L
Sbjct: 74 VYVGNVPYQGTEEEIGNYFSTVGIVNNVRIVYDRETGRPRGFAFVEYSEEAGAQRAVEEL 133
Query: 92 NGAQILGRTIRVDHVAK 108
NGA GR +RV++ K
Sbjct: 134 NGAAFNGRNLRVNYANK 150
>gi|149015798|gb|EDL75122.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_a [Rattus norvegicus]
Length = 306
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|148678911|gb|EDL10858.1| mCG7984 [Mus musculus]
Length = 388
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV++ L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|346467825|gb|AEO33757.1| hypothetical protein [Amblyomma maculatum]
Length = 306
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
VYVGG+ ++ E L A F G++VDV + D T K RGFAFV +E +N+
Sbjct: 9 VYVGGLAEEVDEKVLHAAFIPFGDLVDVQIPLDYETQKHRGFAFVEFEQAEDAAAAIDNM 68
Query: 92 NGAQILGRTIRVDHVAKYKKKE 113
N +++ GRTIRV+ K KE
Sbjct: 69 NDSELFGRTIRVNIAKPMKIKE 90
>gi|395849832|ref|XP_003797517.1| PREDICTED: RNA-binding protein 34, partial [Otolemur garnettii]
Length = 406
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG IV V +VRD+ TG +GF +
Sbjct: 253 IRVDLASETSSRDKRSVFVGNLPYKVEESVVEKHFLDCGNIVAVRIVRDQATGLGKGFGY 312
Query: 82 VAYEDQ-----RNNLNGAQILGRTIRV 103
V +E+ LN ++++GR +RV
Sbjct: 313 VLFENTDAVHLALKLNNSELMGRKLRV 339
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 11/91 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNL--- 91
+YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+AFV Y ED + L
Sbjct: 120 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDAKMALEQM 179
Query: 92 NGAQILGRTIRVDHV-----AKYKKKEEEDE 117
G ++ GRT+RV+ V +Y +++ DE
Sbjct: 180 EGFELAGRTLRVNTVHEKGSTRYTQQDTLDE 210
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------QRNNL 91
++VG +PFD E + +F + G I+ + L D +G+P+GF +V Y N L
Sbjct: 396 LFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNEL 455
Query: 92 NGAQILGRTIRVDH 105
GA +LGR +R+D
Sbjct: 456 QGADLLGRPVRLDF 469
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNL--- 91
SA ++VG + +++ E L + F GE+ V ++ ++ TG+ RGF +V Y + +
Sbjct: 284 SANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAF 343
Query: 92 ---NGAQILGRTIRVDHV 106
GA+I GR I +D+
Sbjct: 344 EAKKGAEIDGRVINLDYA 361
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------QRNNL 91
++VG +PFD E + +F + G I+ + L D +G+P+GF +V Y N L
Sbjct: 399 LFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNEL 458
Query: 92 NGAQILGRTIRVDH 105
GA +LGR +R+D
Sbjct: 459 QGADLLGRPVRLDF 472
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNL--- 91
SA ++VG + +++ E L + F GE+ V ++ ++ TG+ RGF +V Y + +
Sbjct: 287 SANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAF 346
Query: 92 ---NGAQILGRTIRVDHV 106
GA+I GR I +D+
Sbjct: 347 EAKKGAEIDGRVINLDYA 364
>gi|395728858|ref|XP_003775451.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Pongo
abelii]
Length = 1815
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 1658 IRVDLASETSSRDKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGY 1717
Query: 82 VAYEDQRN-----NLNGAQILGRTIRV 103
V +E+ + LN ++++GR +RV
Sbjct: 1718 VLFENTDSVHLALKLNNSELMGRKLRV 1744
>gi|304376936|gb|ACI70007.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 82
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNN 90
D ++VGG+ FD TE L FA+ G I V+++RDK TG+ RGF FV Y ED ++
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 91 LNG 93
L+G
Sbjct: 63 LDG 65
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 9/83 (10%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
+YVG + + +TE DL F++ G++ V L D+ TG+PRGFAFV E + L
Sbjct: 3 IYVGNLSYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVEMETESQETAAIEAL 62
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
+GA+ +GR ++V+ K K +EE
Sbjct: 63 DGAEWMGRDLKVN---KAKPREE 82
>gi|194385818|dbj|BAG65284.1| unnamed protein product [Homo sapiens]
Length = 263
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHV 106
+NG + GR IRVD
Sbjct: 64 MMAMNGKSVDGRQIRVDQA 82
>gi|448878218|gb|AGE46072.1| arginine/serine-rich splicing factor SC26 transcript I [Zea mays]
Length = 218
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------D 86
++S + V + F T DL +F + G+++D+ + RD TG PRGFAFV Y D
Sbjct: 15 RESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEARD 74
Query: 87 QRNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREE----RGVCRA 132
+ L+G + GR + V AKY E+ R R+ EE RG CR+
Sbjct: 75 AIDGLDGMRFDGRALMV-QFAKYGPNAEKIH--RGRITEENPKPRGRCRS 121
>gi|440804413|gb|ELR25290.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 146
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY------EDQR 88
SA ++VGG+ + + L + F Q GE++D ++ D+ TGK RGF FV + E +
Sbjct: 2 SAKLFVGGLSWSTDDNSLRSAFEQHGEVIDAKVILDRDTGKSRGFGFVTFSSADEAEAAK 61
Query: 89 NNLNGAQILGRTIRVDHVA 107
LN + GR IRVD +
Sbjct: 62 GALNQTDLDGREIRVDSAS 80
>gi|355715678|gb|AES05401.1| RNA binding motif protein 34 [Mustela putorius furo]
Length = 398
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG IV V +VRD+ TG RGF +
Sbjct: 243 IRVDLASETSSRDKRSVFVGNLPYKIEESAVEEHFLDCGSIVAVRIVRDRVTGVGRGFGY 302
Query: 82 VAYEDQ-----RNNLNGAQILGRTIRV 103
V +E+ LN ++++GR +RV
Sbjct: 303 VLFENTDAVHLALKLNNSELMGRKLRV 329
>gi|398396946|ref|XP_003851931.1| hypothetical protein MYCGRDRAFT_28846, partial [Zymoseptoria
tritici IPO323]
gi|339471811|gb|EGP86907.1| hypothetical protein MYCGRDRAFT_28846 [Zymoseptoria tritici IPO323]
Length = 161
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN---NL 91
+A ++VGG+ + TE D F Q G ++D L+ DK TG+PRGF FV ++D++ L
Sbjct: 83 TAKIFVGGVSQEATEQDFKEFFMQFGRVLDATLMMDKDTGRPRGFGFVTFDDEKAVERTL 142
Query: 92 NG-AQILGRTIRV 103
G ILG+ I V
Sbjct: 143 EGPLAILGKGIEV 155
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 35/52 (67%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN 89
+++GG+ ++ T+ L F+Q GE+V+ ++RD +G+ RGF F+ ++D +
Sbjct: 2 MFIGGLNWETTDQSLKDYFSQFGEVVECTVMRDGQSGRSRGFGFLTFKDPKT 53
>gi|254568410|ref|XP_002491315.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|238031112|emb|CAY69035.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|328352168|emb|CCA38567.1| Embryonic polyadenylate-binding protein 2 [Komagataella pastoris
CBS 7435]
Length = 209
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN---- 89
DS +YVG + F T G+L F CG + V ++ DK TG+P+GFA+V + D +
Sbjct: 86 DSKSIYVGNVDFSATPGELAEHFKTCGTVNRVTILMDKVTGRPKGFAYVEFSDPSSVSES 145
Query: 90 -NLNGAQILGRTIRV 103
LN ++ GR ++V
Sbjct: 146 LVLNDSEFHGRNLKV 160
>gi|427734808|ref|YP_007054352.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
gi|427369849|gb|AFY53805.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
Length = 98
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
+YVG + + TE DL AVF GE+ V L D+ TG+ RGFAFV ++ + L
Sbjct: 3 IYVGNLSYRATEADLRAVFTDYGEVTRVVLPTDRETGRMRGFAFVDLSEESQEDEAISEL 62
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
+GA+ +GR IRV+ K K KE+
Sbjct: 63 DGAEWMGRQIRVN---KAKPKED 82
>gi|261488362|emb|CBH19556.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
Length = 156
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE---------DQR 88
++VGG+P D TE D + F Q GEIVD ++RDK T +PRGF + Y D
Sbjct: 25 IFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGVITYSNPAVVDRVMDDI 84
Query: 89 NNLNGAQI-LGRTIRVDHV 106
+ NG Q+ + RTI D V
Sbjct: 85 HEFNGKQVEIKRTIPKDSV 103
>gi|344247055|gb|EGW03159.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 384
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|542850|pir||S41766 heterogeneous nuclear ribonucleoprotein G - human
Length = 437
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|186682695|ref|YP_001865891.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186465147|gb|ACC80948.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 104
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
+YVG + + +TE DL FA+ G + V L D+ TG+PRGFAFV E + L
Sbjct: 3 IYVGNLSYQVTEEDLKQAFAEYGTVSRVQLPTDRETGRPRGFAFVEMESDTQEQAAIDAL 62
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEETRQR 122
+GA+ +GR ++V+ K K ED + R
Sbjct: 63 DGAEWMGRDLKVN-----KAKPREDRSSSPR 88
>gi|346324388|gb|EGX93985.1| Nucleotide-binding, alpha-beta plait [Cordyceps militaris CM01]
Length = 284
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+ L+E + +F+ G++ LV D TG+P+GF F Y D + NL
Sbjct: 10 VFVGNIPYGLSEEQITDIFSDAGKVERFRLVYDSETGRPKGFGFAEYPDTDSASSAVRNL 69
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEET 119
N +I+GR +RVD +++K +D+ T
Sbjct: 70 NDYEIMGRKLRVDF--SHEQKASDDDYT 95
>gi|373955307|ref|ZP_09615267.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
gi|373891907|gb|EHQ27804.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
Length = 121
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
++VG +PF + E +L VF + GE+ V ++ D+ TG+ +GF F+ D + +
Sbjct: 3 IFVGSLPFKVEESELKEVFEEFGEVTTVKIITDRETGRSKGFGFIEMPDDEAAQKAISEV 62
Query: 92 NGAQILGRTIRVDH 105
NGA++ GRTI V+
Sbjct: 63 NGAELYGRTIVVNQ 76
>gi|259483749|tpe|CBF79395.1| TPA: heterogeneous nuclear ribonucleoprotein HRP1 (AFU_orthologue;
AFUA_2G06090) [Aspergillus nidulans FGSC A4]
Length = 559
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNGA--- 94
++VGG+ + TE D F Q G ++D L+ DK TG+PRGF FV + D + A
Sbjct: 196 IFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTF-DSEAAVEAALSR 254
Query: 95 --QILGRTIRV 103
+ILG+TI V
Sbjct: 255 PLEILGKTIEV 265
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN 89
K+ +++GG+ ++ T+ L F+Q GE+ + ++RD TG+ RGF F+ ++D +
Sbjct: 107 KEDGKMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKT 163
>gi|226501776|ref|NP_001148421.1| LOC100282036 [Zea mays]
gi|195619182|gb|ACG31421.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 218
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------D 86
++S + V + F T DL +F + G+++D+ + RD TG PRGFAFV Y D
Sbjct: 15 RESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEARD 74
Query: 87 QRNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREE----RGVCRA 132
+ L+G + GR + V AKY E+ R R+ EE RG CR+
Sbjct: 75 AIDGLDGXRFDGRALMV-QFAKYGPNAEKIH--RGRITEENPKPRGRCRS 121
>gi|393244579|gb|EJD52091.1| hypothetical protein AURDEDRAFT_142864 [Auricularia delicata
TFB-10046 SS5]
Length = 334
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG +P+++ E L+ VF G++V LV D+ TGKPRG+ F + D NL
Sbjct: 9 VFVGNVPYNMGEEQLIDVFKNVGQVVGFRLVFDRETGKPRGYGFCEFADHETAMSAVRNL 68
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREE 126
N + GR +R+D +A E TR + EE
Sbjct: 69 NNVIVDGRPLRID-LADSDPFLEGKTTTRGELPEE 102
>gi|393218616|gb|EJD04104.1| splicing factor, CC1-like protein [Fomitiporia mediterranea MF3/22]
Length = 464
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 36 AYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNL- 91
A +YVG + F+LTE D+ VF GE+ V+L +D TG+ +G+AF+ Y ED + L
Sbjct: 238 ATLYVGSLHFNLTESDIKQVFEPFGELDFVDLHKDSATGRSKGYAFIHYKRAEDAKMALE 297
Query: 92 --NGAQILGRTIRVDHV 106
G ++ GRT+RV+ V
Sbjct: 298 QMEGFELAGRTLRVNTV 314
>gi|225563097|gb|EEH11376.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus G186AR]
Length = 410
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ---RNNL 91
++ ++VGG+ + TE D F Q G +VD L+ DK +G+PRGF FV ++ + L
Sbjct: 237 TSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATL 296
Query: 92 NGA-QILGRTIRVDHVAKYKKKEEEDE 117
+G +ILG+ I V EED+
Sbjct: 297 SGPLEILGKPIEVKKAQPRGNMREEDD 323
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 6 QVKRIQHINSKEADLGISDDASWHAKYKDSAY--VYVGGIPFDLTEGDLLAVFAQCGEIV 63
Q K I S ADL ++ H D A +++GG+ ++ T+ L F+Q GE+
Sbjct: 126 QNKGIGLSASTLADL----TSALHECISDDALDKMFIGGLNWETTDQSLKDYFSQFGEVQ 181
Query: 64 DVNLVRDKGTGKPRGFAFVAYEDQRN 89
+ ++RD TG+ RGF F+ ++D +
Sbjct: 182 ECTVMRDGATGRSRGFGFLTFKDPKT 207
>gi|113478076|ref|YP_724137.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169124|gb|ABG53664.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 97
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY----EDQR--NNL 91
+YVG + +D+T+ DL VFA+ G + V L D+ TG+PRGF FV E+Q+ + L
Sbjct: 3 IYVGNLSYDVTQEDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSEEEEQKAIDAL 62
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
+ A+ +GR I+V+ K K +EE
Sbjct: 63 DSAEWMGRDIKVN---KAKPREE 82
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE-----DQRNNLN 92
++VG + +++ L + FAQCGEIV ++ D+ TG+ RGF FV + D+ LN
Sbjct: 41 IFVGMLSWNVDNAWLESEFAQCGEIVSAHVQTDRNTGRSRGFGFVTFASPEAVDKALELN 100
Query: 93 GAQILGRTIRVDHVAKYKKKEEEDEETRQR 122
G +I GR+I VD K E++ + R+R
Sbjct: 101 GKEIDGRSINVD-----KSVEKDQNQVRER 125
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 30 AKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN 89
A + S+ ++VG + FD TE L VF+ G I V++ + +G+P+GF +V +ED +
Sbjct: 133 APSEPSSRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKGFGYVEFEDIES 192
Query: 90 ------NLNGAQILGRTIRVDH 105
+L G +I GR IR++
Sbjct: 193 AKKAHESLVGQEIAGRAIRLEF 214
>gi|260435624|ref|ZP_05789594.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
gi|260413498|gb|EEX06794.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
Length = 190
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
++VG +PF + D++ +FAQ GE+ + L ++ TG+ RGFAF+ D+ L
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGL 62
Query: 92 NGAQILGRTIRVD 104
GA+++GR +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|226088567|dbj|BAH37028.1| RNA binding motif protein [Tokudaia osimensis]
Length = 279
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 39 YVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNLN 92
++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++N
Sbjct: 1 FIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMN 60
Query: 93 GAQILGRTIRVDHVAK 108
G + G+ I+V+ K
Sbjct: 61 GKSLDGKAIKVEQATK 76
>gi|171912058|ref|ZP_02927528.1| RNA-binding region RNP-1 [Verrucomicrobium spinosum DSM 4136]
Length = 150
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
+YVG + + TE D+ +F+Q G + +V+L D+ TG+PRGFAFVA + + L
Sbjct: 5 MYVGNLAWSATEQDVRELFSQYGAVTEVSLPTDRDTGRPRGFAFVAMDTKEAMDAAIKGL 64
Query: 92 NGAQILGRTIRVDH 105
NG + +GR + V+
Sbjct: 65 NGLEWMGRALTVNE 78
>gi|159462614|ref|XP_001689537.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283525|gb|EDP09275.1| predicted protein [Chlamydomonas reinhardtii]
Length = 73
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 40 VGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------QRNNLNG 93
VG IP+D+TE L +F+Q G I + +V DK TGKP+G+ F Y D NLN
Sbjct: 1 VGNIPYDVTEQMLQDMFSQVGAIKSLRMVTDKDTGKPKGYGFCEYHDVGTAQSAVRNLNK 60
Query: 94 AQILGRTIRVD 104
++ GR +RVD
Sbjct: 61 YEVNGRMLRVD 71
>gi|426194040|gb|EKV43972.1| hypothetical protein AGABI2DRAFT_194877 [Agaricus bisporus var.
bisporus H97]
Length = 341
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN----- 89
S V+VG +P+++ E L+ VF G+++ LV D+ TGKPRG+ F + D
Sbjct: 2 SKVVFVGNVPYNMGEDQLIDVFKSVGQVIGFRLVFDRETGKPRGYGFCEFADNETALSAV 61
Query: 90 -NLNGAQILGRTIRVD 104
NLN + GR +R+D
Sbjct: 62 RNLNNVDVGGRPLRID 77
>gi|260942727|ref|XP_002615662.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
gi|238850952|gb|EEQ40416.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
Length = 527
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 33 KDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLN 92
+DS +++GG+ +D TE L++ F++ GEI+D +++D TG+ RGF F+ ++D R
Sbjct: 160 RDSGKMFIGGLNWDTTEEGLVSYFSKYGEILDYTIMKDASTGRSRGFGFLTFKDPR---- 215
Query: 93 GAQILGRTIRVDHV 106
+ I+ DH+
Sbjct: 216 ---AVDEVIKKDHI 226
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE 85
++VGGI + E D F+Q G I+D L+ DK TG+ RGF F+ Y+
Sbjct: 249 IFVGGIDPLVNERDFNDFFSQFGHIIDAQLMIDKDTGRSRGFGFITYD 296
>gi|218885158|ref|YP_002434479.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756112|gb|ACL07011.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 88
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN-----LN 92
+YVG +PF +E ++ +F+Q G+++ V L+ D+ TG+PRGF FV E N LN
Sbjct: 5 LYVGNLPFSASEDEIRDLFSQHGQVLSVKLISDRETGRPRGFGFVEMEAADANSAVEALN 64
Query: 93 GAQILGRTIRVD 104
G GR ++V+
Sbjct: 65 GYSFGGRALKVN 76
>gi|209737234|gb|ACI69486.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 146
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L F++ G I V++VRD+ T + RGF FV +E D
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDA 62
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 63 MAAMNGKSVDGRMIRVDEAGK 83
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 10/112 (8%)
Query: 4 LTQVKRIQHINSKEADLGISDDASWHA-KYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEI 62
L + ++HIN D +S + + A + SA ++VGGI + + L FA+ GE+
Sbjct: 10 LVKNSAVKHINQ---DFSVSTPSLFQAIRSMSSAKLFVGGISYSTDDMSLRESFARYGEV 66
Query: 63 VDVNLVRDKGTGKPRGFAFVAY---EDQRN---NLNGAQILGRTIRVDHVAK 108
+DV ++ D+ TG+ RGF F+ + ED + ++G + GR IRV++ +
Sbjct: 67 IDVKVIMDRETGRSRGFGFITFATSEDASSAIQGMDGQDLHGRRIRVNYATE 118
>gi|170095009|ref|XP_001878725.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646029|gb|EDR10275.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 332
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN----- 89
S V+VG +P+++ E L+ VF G+++ L D+ TGKP+G+ F + D
Sbjct: 4 SKVVFVGNVPYNMAEDQLIDVFKSVGQVIGFRLSYDRDTGKPKGYGFCEFADHETAMSAV 63
Query: 90 -NLNGAQILGRTIRVD 104
NLNG + GR +R+D
Sbjct: 64 RNLNGVDVGGRPLRID 79
>gi|409078041|gb|EKM78405.1| hypothetical protein AGABI1DRAFT_114691 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 341
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 35 SAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN----- 89
S V+VG +P+++ E L+ VF G+++ LV D+ TGKPRG+ F + D
Sbjct: 2 SKVVFVGNVPYNMGEDQLIDVFKSVGQVIGFRLVFDRETGKPRGYGFCEFADNETALSAV 61
Query: 90 -NLNGAQILGRTIRVD 104
NLN + GR +R+D
Sbjct: 62 RNLNNVDVGGRPLRID 77
>gi|345313668|ref|XP_001512332.2| PREDICTED: cold-inducible RNA-binding protein-like [Ornithorhynchus
anatinus]
Length = 270
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQ 87
D ++VGG+ FD E L VF++ G+I +V +V+D+ T + RGF FV +E D
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 88 RNNLNGAQILGRTIRVDHVAK 108
+NG + GR IRVD K
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGK 84
>gi|345798762|ref|XP_536341.3| PREDICTED: RNA-binding protein 34 [Canis lupus familiaris]
Length = 428
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG IV V +VRD+ TG RGF +
Sbjct: 272 IRVDLASETSSRDKRSVFVGNLPYKVEESAVEEHFLDCGSIVAVRIVRDRVTGVGRGFGY 331
Query: 82 VAYEDQ-----RNNLNGAQILGRTIRV 103
V +E+ LN ++++GR +RV
Sbjct: 332 VLFENTDAVHLALKLNNSELMGRKLRV 358
>gi|242012725|ref|XP_002427078.1| peptidyl-prolyl cis-trans isomerase E, putative [Pediculus humanus
corporis]
gi|212511336|gb|EEB14340.1| peptidyl-prolyl cis-trans isomerase E, putative [Pediculus humanus
corporis]
Length = 158
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
+Y GG+ ++ E L A F G+I+D+ + D T K RGFAF+ +E +N+
Sbjct: 9 IYAGGLAEEVDENVLNAAFIPFGDIIDIQIPLDYETEKHRGFAFIEFESAEDAAAAIDNM 68
Query: 92 NGAQILGRTIRVDHVAKYKKKE 113
N +++ GRTIRV+ K KE
Sbjct: 69 NDSELFGRTIRVNLAKPQKIKE 90
>gi|403377312|gb|EJY88648.1| Heterogeneous nuclear ribonucleoprotein A1 [Oxytricha trifallax]
Length = 669
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 39 YVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNGAQIL 97
++GGI + E D+ F Q G +VDV ++RDK TGK RGFAFV +++ NN+ +I+
Sbjct: 251 FIGGILYTAKESDIEKYFRQYGHVVDVAIMRDKHTGKSRGFAFVTFKE--NNMESNRII 307
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR 88
V+VGG+ + LT+ A F Q GE+ D +VR+ TG RGF F+ Y D R
Sbjct: 409 VFVGGLDYQLTDEAFRAHFQQYGEVKDAQIVREPTTGASRGFGFITYFDDR 459
>gi|4098582|gb|AAD00328.1| RBM1 [Sminthopsis macroura]
Length = 390
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L +VF + G IV+V L++D+ T K RGFAF+ +E D ++
Sbjct: 10 LFIGGLNTETNEKGLESVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G++I+V+ K
Sbjct: 70 NGKSLDGKSIKVEQATK 86
>gi|218245224|ref|YP_002370595.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|257058256|ref|YP_003136144.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
gi|218165702|gb|ACK64439.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|256588422|gb|ACU99308.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
Length = 94
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
+YVG + +++TE DL +VF + G + V++ D+ TG+ RGFAFV E + L
Sbjct: 3 IYVGNLAYEVTEADLNSVFGEYGSVKRVHVPMDRDTGRMRGFAFVEMESPSQEDSAISTL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GRT++V+
Sbjct: 63 DGAEWMGRTLKVN 75
>gi|168044555|ref|XP_001774746.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673901|gb|EDQ60417.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 34 DSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN---- 89
D+ V+VGG+ ++ +E + F + GE+V V +V D+ +G+ RGF FV++ + R+
Sbjct: 3 DANSVHVGGLSYESSEDAVKKAFIEFGEVVSVKIVYDRESGESRGFGFVSFTNPRSATMA 62
Query: 90 --NLNGAQILGRTIRVDHVAK 108
+++G QI GRTIRV+ V K
Sbjct: 63 IRDMDGGQIEGRTIRVNEVRK 83
>gi|157823451|ref|NP_001100890.1| RNA-binding motif protein, X chromosome retrogene-like [Rattus
norvegicus]
gi|71152131|sp|P84586.1|RMXRL_RAT RecName: Full=RNA-binding motif protein, X chromosome
retrogene-like; AltName: Full=Heterogeneous nuclear
ribonucleoprotein G retrogene-like; Short=hnRNP G;
AltName: Full=RNA-binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA-binding motif
protein, X chromosome retrogene-like, N-terminally
processed
gi|149037963|gb|EDL92323.1| RNA binding motif protein, X chromosome retrogene (predicted)
[Rattus norvegicus]
Length = 388
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV++ L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|302782275|ref|XP_002972911.1| hypothetical protein SELMODRAFT_8465 [Selaginella moellendorffii]
gi|302812663|ref|XP_002988018.1| hypothetical protein SELMODRAFT_8471 [Selaginella moellendorffii]
gi|300144124|gb|EFJ10810.1| hypothetical protein SELMODRAFT_8471 [Selaginella moellendorffii]
gi|300159512|gb|EFJ26132.1| hypothetical protein SELMODRAFT_8465 [Selaginella moellendorffii]
Length = 79
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V VG IP+D TE L+ + + G +V LV D+ TGKP+G+ F + D+ R NL
Sbjct: 1 VAVGNIPYDATEEQLIQICEEVGPVVSFRLVTDRETGKPKGYGFCEFRDEETALSARRNL 60
Query: 92 NGAQILGRTIRVDH 105
+G + GR +RVD
Sbjct: 61 SGYDLNGRQLRVDF 74
>gi|241710586|ref|XP_002412054.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215505115|gb|EEC14609.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 275
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED 86
V+VGG+ D+ E DL FAQ G I+ VNLV +K TG+ RGFAFV Y+D
Sbjct: 73 VFVGGLKDDVDESDLRDYFAQFGNILSVNLVTEKETGRKRGFAFVEYDD 121
>gi|17232175|ref|NP_488723.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|6274493|gb|AAF06670.1|AF196328_2 RbpD [Nostoc sp. PCC 7120]
gi|1064777|dbj|BAA08402.1| RNA-binding protein [Anabaena variabilis]
gi|17133820|dbj|BAB76382.1| RNA-binding protein [Nostoc sp. PCC 7120]
Length = 110
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 9/83 (10%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
+Y+G + + +TE DL FA+ G++ V L D+ TG+PRGFAFV E + L
Sbjct: 3 IYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEAL 62
Query: 92 NGAQILGRTIRVDHVAKYKKKEE 114
+GA+ +GR ++V+ K K +EE
Sbjct: 63 DGAEWMGRDLKVN---KAKPREE 82
>gi|397508184|ref|XP_003824546.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Pan
paniscus]
Length = 459
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRDK TG +GF +
Sbjct: 302 IRVDLASETSSRDKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGY 361
Query: 82 VAYEDQRN-----NLNGAQILGRTIRVDHVAKYKKKEEEDEETRQR 122
V +E+ + LN ++++GR +RV +K ++++ R +
Sbjct: 362 VLFENTDSVHLALKLNNSELMGRKLRVMRSVNKEKLKQQNSNPRLK 407
>gi|17231514|ref|NP_488062.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|75907900|ref|YP_322196.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|81818528|sp|Q44556.3|RBPD_NOSS1 RecName: Full=Putative RNA-binding protein RbpD
gi|1064779|dbj|BAA08403.1| RNA-binding protein [Anabaena variabilis]
gi|17133157|dbj|BAB75721.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|75701625|gb|ABA21301.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 94
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV-----AYEDQR-NNL 91
+YVG + + TE DL AVFA GE+ V L D+ TG+ RGFAFV A ED L
Sbjct: 3 IYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAITEL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GR +RV+
Sbjct: 63 DGAEWMGRQLRVN 75
>gi|351694564|gb|EHA97482.1| RNA-binding protein 34 [Heterocephalus glaber]
Length = 428
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V++G +P+ + E + F CG IV V +VRD TG +GF +
Sbjct: 271 IRVDLASETSSRDKRSVFIGNLPYKVEETAVEEHFLDCGSIVAVRIVRDPVTGVGKGFGY 330
Query: 82 VAYEDQ-----RNNLNGAQILGRTIRVDH-VAKYKKKEE 114
V +E+ LN ++++GR +RV H V K K K++
Sbjct: 331 VLFENTDAVHLALKLNNSELMGRKLRVMHSVNKEKLKQQ 369
>gi|328866985|gb|EGG15368.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 436
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 29 HAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR 88
+AK S V+VG IP+ +E DL+ +F++ G +V LV D+ KPRG+ F Y DQ
Sbjct: 5 NAKPNPSRSVFVGNIPYAASESDLVNLFSEVGRVVSFRLVEDRDKKKPRGYGFCEYMDQE 64
Query: 89 NNLNGAQILG------RTIRVDHVAKYKKKE 113
LN ++L R +RV + K E
Sbjct: 65 TALNAIRLLNNREFNKRQLRVSYADNDKANE 95
>gi|150866885|ref|XP_001386627.2| hypothetical protein PICST_68431 [Scheffersomyces stipitis CBS
6054]
gi|149388141|gb|ABN68598.2| nuclear polyadenylated RNA-binding protein 4 [Scheffersomyces
stipitis CBS 6054]
Length = 481
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNGAQIL 97
+++GG+ +D TE L++ F++ GE+VD +++D TGK RGF F+ + D ++ +
Sbjct: 162 MFIGGLNWDTTEEGLVSYFSKFGEVVDYTIMKDNNTGKSRGFGFLTFRDPKS-------V 214
Query: 98 GRTIRVDHV 106
I+ DH+
Sbjct: 215 DEVIKTDHI 223
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE 85
++VGGI + E + F+Q G I+D L+ DK +G+ RGF F+ ++
Sbjct: 246 IFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDSGRSRGFGFITFD 293
>gi|241149709|ref|XP_002406178.1| cyclophilin type peptidyl-prolyl cis-trans isomerase, putative
[Ixodes scapularis]
gi|215493819|gb|EEC03460.1| cyclophilin type peptidyl-prolyl cis-trans isomerase, putative
[Ixodes scapularis]
Length = 292
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQR------NNL 91
VYVGG+ ++ E L A F G++VDV + D T K RGFAFV +E +N+
Sbjct: 9 VYVGGLAEEVDEKVLHAAFIPFGDVVDVQIPLDYETEKHRGFAFVEFEQAEDAVAAIDNM 68
Query: 92 NGAQILGRTIRVDHVAKYKKKE 113
N +++ GRTIRV+ K KE
Sbjct: 69 NDSELFGRTIRVNVAKPMKIKE 90
>gi|82802769|gb|ABB92435.1| RBM1 [Homo sapiens]
Length = 384
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L VF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|313243391|emb|CBY42167.1| unnamed protein product [Oikopleura dioica]
Length = 199
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQ------RNNL 91
V+VG IP++ TE + +F + G ++ LV D+ TGKP+G+ F Y+D NL
Sbjct: 27 VFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGYGFCEYKDTDTAMSAMRNL 86
Query: 92 NGAQILGRTIRVDHVAK 108
N ++ GR +RVDH +
Sbjct: 87 NTRELHGRNLRVDHATR 103
>gi|431891348|gb|ELK02224.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 278
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|82802775|gb|ABB92438.1| RBM1 [Pongo pygmaeus]
Length = 385
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L VF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|78211572|ref|YP_380351.1| RNA recognition motif-containing protein [Synechococcus sp. CC9605]
gi|78196031|gb|ABB33796.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus sp.
CC9605]
Length = 173
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
++VG +PF + D++ +FAQ GE+ + L ++ TG+ RGFAF+ D+ L
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGL 62
Query: 92 NGAQILGRTIRVD 104
GA+++GR +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|434395383|ref|YP_007130330.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428267224|gb|AFZ33170.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 101
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV-----AYEDQR-NNL 91
VYVG + +++T+ DL AVFA+ G + V L D+ TG+ RGF FV A ED + L
Sbjct: 3 VYVGNLSYEVTQEDLSAVFAEYGSVKRVQLPTDRETGRVRGFGFVEMDTEAEEDLAIDAL 62
Query: 92 NGAQILGRTIRVD 104
+GA+ +GRT+RV+
Sbjct: 63 DGAEWMGRTLRVN 75
>gi|82802771|gb|ABB92436.1| RBM1 [Pan troglodytes]
gi|82802773|gb|ABB92437.1| RBM1 [Gorilla gorilla]
Length = 385
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L VF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|82802779|gb|ABB92440.1| RBM1 [Chlorocebus sabaeus]
Length = 385
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L VF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|324507077|gb|ADY43007.1| RNA-binding protein 34 [Ascaris suum]
Length = 376
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 32 YKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN-- 89
Y V++G +PF E DL A F +CG++ V +VRD+ TG +G AFVA+++
Sbjct: 225 YDSQKTVFIGNVPFGTQEDDLCAHFEKCGDVDFVRIVRDRATGIGKGIAFVAFKETAVIP 284
Query: 90 ---NLNGAQILGRTIRVDHVAKYKKK 112
++G+ GR +RV + K K+
Sbjct: 285 IALKMDGSDFGGRQLRVTRIQKKNKR 310
>gi|374253685|sp|D4AE41.1|RMXL1_RAT RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
Contains: RecName: Full=RNA binding motif protein,
X-linked-like-1, N-terminally processed
Length = 388
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L AVF + G IV++ L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|296230931|ref|XP_002760846.1| PREDICTED: RNA-binding protein 34 [Callithrix jacchus]
Length = 429
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
I D + +D V+VG +P+ + E + F CG I+ V +VRD+ TG +GF +
Sbjct: 273 IRVDLASATSSRDKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDQVTGIGKGFGY 332
Query: 82 VAYEDQRN-----NLNGAQILGRTIRVD-HVAKYKKKEEEDEETRQRMREERGV 129
V +E+ + LN ++++GR +RV V K K K+ + + + + ++G+
Sbjct: 333 VLFENTDSVHLALKLNNSELMGRKLRVMRSVNKEKLKQNSNPQLKNVSKPKQGL 386
>gi|82802777|gb|ABB92439.1| RBM1 [Hylobates lar]
Length = 385
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYE------DQRNNL 91
+++GG+ + E L VF + G IV+V L++D+ T K RGFAFV +E D ++
Sbjct: 10 LFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDM 69
Query: 92 NGAQILGRTIRVDHVAK 108
NG + G+ I+V+ K
Sbjct: 70 NGKSLDGKAIKVEQATK 86
>gi|330939341|ref|XP_003305832.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
gi|311316974|gb|EFQ86065.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
Length = 562
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNGAQIL 97
++VGG+ + TE D F Q G +VD L+ DK TG+PRGF FV ++ G +
Sbjct: 191 IFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRPRGFGFVTFD-------GDAAV 243
Query: 98 GRTIRVDHVAKYKKKEEEDEETRQRMREERG 128
T+R K+ E + + R MR+E G
Sbjct: 244 DATLRAPLQILGKQIEVKRAQPRGNMRDEEG 274
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 22 ISDDASWHAKYKDSAYVYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAF 81
+ DD K+ +++GG+ ++ TE L F+Q GE+ + ++RD TG+ RGF F
Sbjct: 91 MEDDNYGPINVKEDGKMFIGGLNWETTEESLKNYFSQFGEVSECTVMRDSATGRSRGFGF 150
Query: 82 VAYEDQR 88
+ ++D +
Sbjct: 151 LTFKDPK 157
>gi|440792320|gb|ELR13547.1| cleavage stimulation factor 64kDa subunit, partial [Acanthamoeba
castellanii str. Neff]
Length = 84
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+D TE L +F+ G + LV D+ TGKP+GF F Y D NL
Sbjct: 14 VFVGNIPYDATEEQLTEIFSSVGPVTCFRLVFDRETGKPKGFGFCEYRDTETAMSAMRNL 73
Query: 92 NGAQILGRTIR 102
NG I GR +R
Sbjct: 74 NGYDINGRALR 84
>gi|449018258|dbj|BAM81660.1| similar to nucleolar RNA-binding protein [Cyanidioschyzon merolae
strain 10D]
Length = 406
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN---NLN-- 92
+++G +PF E ++ +VF+ CG I++V +VRD TG +GFA+V + + N L+
Sbjct: 186 IFIGNVPFTANEEEIRSVFSDCGAILNVRIVRDAQTGMGKGFAYVTFAPEANMDLALSRH 245
Query: 93 -GAQILGRTIRVD 104
Q+ GR +RV+
Sbjct: 246 ETVQLHGRLLRVE 258
>gi|299469902|emb|CBN76756.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 774
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 4 LTQVKRIQHINSKEADL----------GISDDASWHAKYKDSAYVYVGGIPFDLTEGDLL 53
+ KR + E DL +SD + A+ + VYVG + +TE D+
Sbjct: 274 FAKSKRTYTLTQVETDLREAKKGRLYASMSDPMASAAQPDPDSTVYVGNLDPSVTEDDIR 333
Query: 54 AVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNGAQI 96
FA+CG I V + +DK TGK RG AFVA+ L +
Sbjct: 334 EFFAECGAIASVRIPQDKETGKMRGIAFVAFAKHSGVLQALTL 376
>gi|67900918|ref|XP_680715.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
gi|40742836|gb|EAA62026.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
Length = 448
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNNLNGA--- 94
++VGG+ + TE D F Q G ++D L+ DK TG+PRGF FV + D + A
Sbjct: 85 IFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTF-DSEAAVEAALSR 143
Query: 95 --QILGRTIRV 103
+ILG+TI V
Sbjct: 144 PLEILGKTIEV 154
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 34/52 (65%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN 89
+++GG+ ++ T+ L F+Q GE+ + ++RD TG+ RGF F+ ++D +
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKT 52
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 11/91 (12%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAY---EDQRNNL--- 91
+YVG + F+LTE D+ VF GE+ V+L RD TG+ +G+ F+ Y ED + L
Sbjct: 210 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYCFIQYKRAEDAKMALEQM 269
Query: 92 NGAQILGRTIRVDHV-----AKYKKKEEEDE 117
G ++ GRT+RV+ V KY ++E +E
Sbjct: 270 EGFELAGRTLRVNTVHEKGTVKYTQQESLEE 300
>gi|282900575|ref|ZP_06308517.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281194375|gb|EFA69330.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 103
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV--AYEDQRN----NL 91
+YVG + +D+T DL + F++ G + V L DK TG+PRGF FV + E + N L
Sbjct: 3 IYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDKETGRPRGFGFVDMSSEAEENAAIDAL 62
Query: 92 NGAQILGRTIRVD 104
NGA+ +GR ++V+
Sbjct: 63 NGAEWMGRQLKVN 75
>gi|166365958|ref|YP_001658231.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|425466552|ref|ZP_18845850.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
gi|166088331|dbj|BAG03039.1| RNA binding protein [Microcystis aeruginosa NIES-843]
gi|389830907|emb|CCI26790.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
Length = 98
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRNN------L 91
+YVG +PF++ + D++ VF + GEI V+L D+ T + RGFAFV E L
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGEIKRVHLPMDRETKRKRGFAFVEMETPEQEAKAIAAL 62
Query: 92 NGAQILGRTIRVDH 105
+GAQ +GR ++V+
Sbjct: 63 DGAQWMGRELKVNQ 76
>gi|78183598|ref|YP_376032.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
gi|78167892|gb|ABB24989.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
Length = 196
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFV------AYEDQRNNL 91
++VG +PF + D+ +FAQ GE+V+ L ++ TG+ RGFAFV A E L
Sbjct: 3 IFVGNLPFRAEQEDVTELFAQFGEVVNCALPLERDTGRKRGFAFVEMSDDAAEEAAIEGL 62
Query: 92 NGAQILGRTIRVD 104
GA+++GR +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|359463214|ref|ZP_09251777.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 99
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYED------QRNNL 91
+Y+G + FD TE DL AVFA+ G + V + D+ TG+ RGFAFV + + L
Sbjct: 13 IYIGNLSFDATEQDLNAVFAEYGTVKQVKMPTDRETGRKRGFAFVEMGNDAEEAKAIDEL 72
Query: 92 NGAQILGRTIRVD 104
GA+ +GRT++V+
Sbjct: 73 EGAEWMGRTLKVN 85
>gi|358391586|gb|EHK40990.1| hypothetical protein TRIATDRAFT_249243 [Trichoderma atroviride IMI
206040]
Length = 300
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 38 VYVGGIPFDLTEGDLLAVFAQCGEIVDVNLVRDKGTGKPRGFAFVAYEDQRN------NL 91
V+VG IP+ L+E + +F+ G++ LV D TG+P+GF F Y D + NL
Sbjct: 10 VFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 92 NGAQILGRTIRVDHVAKYKKKEEEDEET 119
N +I+GR +RVD + K +++ + T
Sbjct: 70 NEYEIMGRKLRVDFSNEQKSTDDDGQNT 97
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,008,945,177
Number of Sequences: 23463169
Number of extensions: 228044598
Number of successful extensions: 1102719
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14153
Number of HSP's successfully gapped in prelim test: 18289
Number of HSP's that attempted gapping in prelim test: 883757
Number of HSP's gapped (non-prelim): 147175
length of query: 291
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 150
effective length of database: 9,050,888,538
effective search space: 1357633280700
effective search space used: 1357633280700
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)