BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022819
(291 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 280 bits (716), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 138/287 (48%), Positives = 188/287 (65%), Gaps = 4/287 (1%)
Query: 2 STSIKQPQVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAW---E 58
S+S Q QVITCKAAVAW + +R+KV+ T+LC +D W +
Sbjct: 16 SSSATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKD 75
Query: 59 TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTC-EVLG 117
+ +FP + GHEA+GIVESVG GVTE G+HV+ + EC+ C+ CKS K+N C +V
Sbjct: 76 PEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRA 135
Query: 118 LERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXX 177
GVM +D+++RFSI GKP+YH+ S+FS+YTVVH K+ +APLEK+
Sbjct: 136 ATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCG 195
Query: 178 XXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237
WN A + GS V +FGLGTVGL+VA+GAKA GASRIIG+D + +K ++AK F
Sbjct: 196 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNF 255
Query: 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
GVTEF+NP ++ +P+QQVI +TDGG DYSFECIG+ ++ +AL+ C
Sbjct: 256 GVTEFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECC 302
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 268 bits (685), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 181/282 (64%), Gaps = 4/282 (1%)
Query: 7 QPQVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAW---ETQAIF 63
Q QVITCKAAVA+ + +RIK++ T+LC +D W + + +F
Sbjct: 3 QGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLF 62
Query: 64 PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTC-EVLGLERRG 122
P I GHEA+GIVESVG GVTE G+HV+ + EC+ C+ CKS K+N C +V G
Sbjct: 63 PCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVG 122
Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXX 182
+M +D+++RFS+ GKP+YH+ S+FS+YTVVH K+ APL+K+
Sbjct: 123 IMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGL 182
Query: 183 XXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242
WN A + GS V IFGLGTVGL+VA+GAK GASRIIG+D + +K E AK FGV EF
Sbjct: 183 GAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEF 242
Query: 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
+NP D+++P+Q+VI +TDGG DYSFECIG+ ++ AL+ C
Sbjct: 243 VNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECC 284
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 233 bits (594), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 118/279 (42%), Positives = 166/279 (59%), Gaps = 3/279 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAW---ETQAIFPR 65
+VI CKAAVAW A + IRIK++ T +C +D+ + + FP
Sbjct: 5 KVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPV 64
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
+ GHE +GIVESVGPGVTEF GE V+ +FI +C CR C+S K+N C +
Sbjct: 65 VLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
S ++TRF+ KG+ V + S+FS+YTVV+ K+ APL+ +
Sbjct: 125 SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAA 184
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
N A + GST +FGLG VGL+ G + GA RII VD NP+K EKAK FG T+F+NP
Sbjct: 185 VNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP 244
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
ND++EP+ QV+ ++T+GG D+S EC+G+ G++ AL+SC
Sbjct: 245 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESC 283
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 228 bits (580), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 167/279 (59%), Gaps = 3/279 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
+VI CKAAVAW AG+ +RIK++ T++C +D ++ + + FP
Sbjct: 4 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
I GHE +GIVESVG GVT+ G+ V+ ++I +C C+ C + K+N C+ + + + +
Sbjct: 64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 123
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D +RF+ KGK + HY S+FSEYTVV K+ +APL+K+
Sbjct: 124 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
N A + GS +FGLG VGL+V G K GASRIIGVD N +K +AK FG TE +NP
Sbjct: 184 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
D ++P+Q+V+ +TDGG DYSFECIG+ ++ AL++C
Sbjct: 244 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEAC 282
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 227 bits (579), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 167/279 (59%), Gaps = 3/279 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
+VI CKAAVAW AG+ +RIK++ T++C +D ++ + + FP
Sbjct: 3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
I GHE +GIVESVG GVT+ G+ V+ ++I +C C+ C + K+N C+ + + + +
Sbjct: 63 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 122
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D +RF+ KGK + HY S+FSEYTVV K+ +APL+K+
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 182
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
N A + GS +FGLG VGL+V G K GASRIIGVD N +K +AK FG TE +NP
Sbjct: 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP 242
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
D ++P+Q+V+ +TDGG DYSFECIG+ ++ AL++C
Sbjct: 243 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEAC 281
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 227 bits (579), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 167/279 (59%), Gaps = 3/279 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
+VI CKAAVAW AG+ +RIK++ T++C +D ++ + + FP
Sbjct: 4 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
I GHE +GIVESVG GVT+ G+ V+ ++I +C C+ C + K+N C+ + + + +
Sbjct: 64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 123
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D +RF+ KGK + HY S+FSEYTVV K+ +APL+K+
Sbjct: 124 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
N A + GS +FGLG VGL+V G K GASRIIGVD N +K +AK FG TE +NP
Sbjct: 184 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
D ++P+Q+V+ +TDGG DYSFECIG+ ++ AL++C
Sbjct: 244 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEAC 282
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 224 bits (572), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 166/279 (59%), Gaps = 3/279 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
+VI CKAAVAW AG+ +RIK++ T++C +D ++ + + FP
Sbjct: 3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
I GH +GIVESVG GVT+ G+ V+ ++I +C C+ C + K+N C+ + + + +
Sbjct: 63 ILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 122
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D +RF+ KGK + HY S+FSEYTVV K+ +APL+K+
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 182
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
N A + GS +FGLG VGL+V G K GASRIIGVD N +K +AK FG TE +NP
Sbjct: 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP 242
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
D ++P+Q+V+ +TDGG DYSFECIG+ ++ AL++C
Sbjct: 243 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEAC 281
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 213 bits (541), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/279 (41%), Positives = 156/279 (55%), Gaps = 4/279 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V +CRSD + + P I
Sbjct: 5 KVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL-ERRGVMH 125
GHEA+GIVESVG GVT G+ V+ +F +C CR CK+ +SN C L RG +
Sbjct: 65 LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D RF+ GKP++H+ VS+FS+YTVV K+ + +PLEK+
Sbjct: 125 -DGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
VA ++ GST +FGLG VGLSV G KA GA+RII VD N +K KAK G TE +NP
Sbjct: 184 VKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
D +P+Q+V+K +TDGG D+SFE IG + +L C
Sbjct: 244 QDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCC 282
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 156/279 (55%), Gaps = 4/279 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V +CR+D + + P I
Sbjct: 5 KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL-ERRGVMH 125
GHEA+GIVESVG GVT G+ V+ +F +C CR CK+ +SN C L RG +
Sbjct: 65 LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 125 -DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
NVA ++ GST +FGLG VGLS G KA GA+RII VD N +K KAK G TE +NP
Sbjct: 184 VNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
D +P+Q+V+K +TDGG D+SFE IG + +L C
Sbjct: 244 QDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCC 282
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 212 bits (539), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 156/279 (55%), Gaps = 4/279 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V +CR+D + + P I
Sbjct: 5 KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL-ERRGVMH 125
GHEA+GIVESVG GVT G+ V+ +F +C CR CK+ +SN C L RG +
Sbjct: 65 LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 125 -DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
NVA ++ GST +FGLG VGLS G KA GA+RII VD N +K KAK G TE +NP
Sbjct: 184 VNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
D +P+Q+V+K +TDGG D+SFE IG + +L C
Sbjct: 244 QDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCC 282
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 210 bits (534), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 118/280 (42%), Positives = 160/280 (57%), Gaps = 5/280 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V T +CRSD + + P I
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
GHEA+GIVES+G GVT G+ V+ +F +C CR CK + N C L RG M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D +RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
VA +++GST +FGLG VGLSV G KA GA+RIIGVD N +K KAK G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
D +P+Q+V+ +++GG D+SFE IG + TAL SCC
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCC 282
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 210 bits (534), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 118/280 (42%), Positives = 160/280 (57%), Gaps = 5/280 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V T +CRSD + + P I
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
GHEA+GIVES+G GVT G+ V+ +F +C CR CK + N C L RG M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D +RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
VA +++GST +FGLG VGLSV G KA GA+RIIGVD N +K KAK G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
D +P+Q+V+ +++GG D+SFE IG + TAL SCC
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCC 282
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 210 bits (534), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 118/280 (42%), Positives = 160/280 (57%), Gaps = 5/280 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V T +CRSD + + P I
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
GHEA+GIVES+G GVT G+ V+ +F +C CR CK + N C L RG M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D +RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
VA +++GST +FGLG VGLSV G KA GA+RIIGVD N +K KAK G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
D +P+Q+V+ +++GG D+SFE IG + TAL SCC
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCC 282
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 210 bits (534), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 118/280 (42%), Positives = 160/280 (57%), Gaps = 5/280 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V T +CRSD + + P I
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
GHEA+GIVES+G GVT G+ V+ +F +C CR CK + N C L RG M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D +RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
VA +++GST +FGLG VGLSV G KA GA+RIIGVD N +K KAK G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
D +P+Q+V+ +++GG D+SFE IG + TAL SCC
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCC 282
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 155/279 (55%), Gaps = 4/279 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V +C +D + + P I
Sbjct: 5 KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL-ERRGVMH 125
GHEA+GIVESVG GVT G+ V+ +F +C CR CK+ +SN C L RG +
Sbjct: 65 LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 125 -DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
NVA ++ GST +FGLG VGLS G KA GA+RII VD N +K KAK G TE +NP
Sbjct: 184 VNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
D +P+Q+V+K +TDGG D+SFE IG + +L C
Sbjct: 244 QDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCC 282
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/280 (42%), Positives = 160/280 (57%), Gaps = 5/280 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V T +CRSD + + P I
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
GHEA+GIVES+G GVT G+ V+ +F +C CR CK + N C L RG M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D +RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
VA +++GST +FGLG VGLSV G KA GA+RIIGVD N +K KAK G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
D +P+Q+V+ +++GG D+SFE IG + TAL SCC
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCC 282
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 209 bits (532), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 162/281 (57%), Gaps = 7/281 (2%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWETQ---AIFPR 65
+VI CKAA+AW AG+ +RI+++ TSLC +D T +++ FP
Sbjct: 7 KVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLAFPV 66
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGV- 123
I GHEA+GIVES+GPGVT G+ V+ ++ C+ C+ C S +N C ++ L+
Sbjct: 67 IVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASD 126
Query: 124 --MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXX 181
+ D+ +RF+ KGKPVYH+ S+FS+YTVV K+ A LE++
Sbjct: 127 QQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTG 186
Query: 182 XXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
N A ++ GST +FGLG VGLS G KA GASRIIG+D N EK KAKA G T+
Sbjct: 187 YGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATD 246
Query: 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQ 282
LNP D ++P+Q+VI +T GG D++ +C G + + AL
Sbjct: 247 CLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMKAALD 287
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 160/280 (57%), Gaps = 5/280 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V T +CRSD + + P I
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
GHEA+GIVES+G GVT G+ V+ +F +C CR CK + N C L RG M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D +RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
VA +++GST +FGLG VGLSV G KA GA+RIIGVD N ++ KAK G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
D +P+Q+V+ +++GG D+SFE IG + TAL SCC
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCC 282
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 155/279 (55%), Gaps = 4/279 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V +C +D + + P I
Sbjct: 5 KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVSGNLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL-ERRGVMH 125
GHEA+GIVESVG GVT G+ V+ +F +C CR CK+ +SN C L RG +
Sbjct: 65 LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 125 -DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
NVA ++ GST +FGLG VGLS G KA GA+RII VD N +K KAK G TE +NP
Sbjct: 184 VNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
D +P+Q+V+K +TDGG D+SFE IG + +L C
Sbjct: 244 QDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCC 282
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 156/282 (55%), Gaps = 6/282 (2%)
Query: 7 QPQVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWETQ--AIFP 64
Q +VI CKAA+AW G +RI+V+ T +C +DI A + + A+FP
Sbjct: 3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPKKKALFP 62
Query: 65 RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV- 123
+ GHE +GIVESVGPGVT F G+ V+ F +CK C+ C S +N C L +
Sbjct: 63 VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTI 122
Query: 124 ---MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXX 180
+ D+ +RF+ KG+ +YH+ VSSFS+YTVV +V A LE++
Sbjct: 123 DQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSS 182
Query: 181 XXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
N A ++ GST +FGLG VGLS G K GASRII +D N EK KAKA G T
Sbjct: 183 GYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT 242
Query: 241 EFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQ 282
+ LNP + ++PVQ VI +T GG DYS +C G + A+
Sbjct: 243 DCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVD 284
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 158/279 (56%), Gaps = 4/279 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V +CRSD + + A P I
Sbjct: 5 KVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
GHEA+GIVES+G GVT G+ V+ +FI +C C CK + N C RG M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQ- 123
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXW 186
D +RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 124 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAV 183
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
VA +++GST +FGLG VGLSV G KA GA+RIIGVD N +K KAK G TE +NP
Sbjct: 184 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 243
Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
D +P+Q+V+ +++GG D+SFE IG + AL SCC
Sbjct: 244 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAAL-SCC 281
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 158/279 (56%), Gaps = 4/279 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V +CRSD + + A P I
Sbjct: 5 KVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
GHEA+GIVES+G GVT G+ V+ +FI +C C CK + N C RG M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQ- 123
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXW 186
D +RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 124 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAV 183
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
VA +++GST +FGLG VGLSV G KA GA+RIIGVD N +K KAK G TE +NP
Sbjct: 184 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 243
Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
D +P+Q+V+ +++GG D+SFE IG + AL SCC
Sbjct: 244 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAAL-SCC 281
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 208 bits (529), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 159/280 (56%), Gaps = 5/280 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V T +CRSD + + P I
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
GHEA+GIVES+G GVT G+ V+ +F +C CR CK + N C L RG M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D +RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
VA +++GST +FGLG GLSV G KA GA+RIIGVD N +K KAK G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
D +P+Q+V+ +++GG D+SFE IG + TAL SCC
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCC 282
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 208 bits (529), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 156/282 (55%), Gaps = 6/282 (2%)
Query: 7 QPQVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWETQ--AIFP 64
Q +VI CKAA+AW G +RI+V+ T +C +DI A + + A+FP
Sbjct: 3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFP 62
Query: 65 RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV- 123
+ GHE +GIVESVGPGVT F G+ V+ F +CK C+ C S +N C L +
Sbjct: 63 VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTI 122
Query: 124 ---MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXX 180
+ D+ +RF+ KG+ +YH+ VSSFS+YTVV +V A LE++
Sbjct: 123 DQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSS 182
Query: 181 XXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
N A ++ GST +FGLG VGLS G K GASRII +D N EK KAKA G T
Sbjct: 183 GYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT 242
Query: 241 EFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQ 282
+ LNP + ++PVQ VI +T GG DYS +C G + A+
Sbjct: 243 DCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVD 284
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 207 bits (527), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 160/280 (57%), Gaps = 5/280 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V T +CRSD + + P I
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
GHEA+GIVES+G GVT G+ V+ ++ +C CR CK + N C L RG M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D +RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
VA +++GST +FGLG VGLSV G KA GA+RIIGVD N +K KAK G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
D +P+Q+V+ +++GG D+SFE IG + TAL SCC
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCC 282
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 206 bits (525), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 159/280 (56%), Gaps = 5/280 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V T +CRSD + + P I
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
GHEA+GIVES+G GVT G+ V+ + +C CR CK + N C L RG M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D +RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
VA +++GST +FGLG VGLSV G KA GA+RIIGVD N +K KAK G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
D +P+Q+V+ +++GG D+SFE IG + TAL SCC
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCC 282
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 159/280 (56%), Gaps = 5/280 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V T +CRSD + + P I
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
GHEA+GIVES+G GVT G+ V+ ++ +C CR CK + N C L RG M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D +RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
VA +++GST +FGLG GLSV G KA GA+RIIGVD N +K KAK G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
D +P+Q+V+ +++GG D+SFE IG + TAL SCC
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCC 282
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 154/278 (55%), Gaps = 3/278 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWETQAI--FPRI 66
+VI CKAAV W Q +RIK++ T +CR+D + + FP I
Sbjct: 5 KVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSKFPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
GHEA+GIVES+G GVT G+ V+ +F+ +C+ C C++ N C + RGV+ +
Sbjct: 65 VGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVL-A 123
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXW 186
D TRF+ KGKPV+H+ S+F+EYTVV K+ AP EK+
Sbjct: 124 DGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAV 183
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
+ GST V+FGLG VGLSV G K+ GASRIIG+D N +K EKA A G TE ++P
Sbjct: 184 KTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK 243
Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
D+ +P+ +V+ +T Y+FE IG + AL SC
Sbjct: 244 DSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASC 281
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 154/278 (55%), Gaps = 3/278 (1%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWETQAI--FPRI 66
+VI CKAAV W Q +RIK++ T +CR+D + + FP I
Sbjct: 5 KVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSKFPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
GHEA+GIVES+G GVT G+ V+ +F+ +C+ C C++ N C + RGV+ +
Sbjct: 65 VGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVL-A 123
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXW 186
D TRF+ KGKPV+H+ S+F+EYTVV K+ AP EK+
Sbjct: 124 DGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAV 183
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
+ GST V+FGLG VGLSV G K+ GASRIIG+D N +K EKA A G TE ++P
Sbjct: 184 KTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK 243
Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
D+ +P+ +V+ +T Y+FE IG + AL SC
Sbjct: 244 DSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASC 281
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 204 bits (518), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 153/278 (55%), Gaps = 2/278 (0%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
+VI CKAAV W + +RIK+V +C +D + + P I
Sbjct: 5 KVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
GHEA+GIVESVG GVT G+ V+ + I +C CR CK+ +SN C +
Sbjct: 65 LGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQ 124
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXW 186
D +RF+ + KP++H+ +S+FS+YTVV K+ + +PLEK+
Sbjct: 125 DGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
NVA ++ GST +FGLG VGLS G KA GA+RII VD N +K KAK G TE +NP
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQ 244
Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
D +P+Q+V+K +TDGG D+SFE IG + +L C
Sbjct: 245 DYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCC 282
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 198 bits (503), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 152/275 (55%), Gaps = 3/275 (1%)
Query: 11 ITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWE--TQAIFPRIFG 68
ITCKAAVAW + +RIK++ + +C SD + + + FP I G
Sbjct: 8 ITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVILG 67
Query: 69 HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
HEA G+VES+G GVT G+ V+ +F+ +C +CR CKS SN CE + + + +D
Sbjct: 68 HEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADM 127
Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNV 188
+RF+ +GKP+Y+ S+F+EYTVV K+ APLE N
Sbjct: 128 TSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAV-NT 186
Query: 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248
A ++ GST +FGLG VG S G KA GASRIIGV T+ +K KA G TE LNP D
Sbjct: 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDY 246
Query: 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQS 283
++P+ +VI T+GG DY+ EC G + ALQS
Sbjct: 247 DKPIYEVICEKTNGGVDYAVECAGRIETMMNALQS 281
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 116/240 (48%), Gaps = 13/240 (5%)
Query: 40 IRIKVVCTSLCRSDITAWETQ--AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIG 97
+ +KVV T +C +D+ + + P + GHE SGI+E++GP VTE G+HV+ + G
Sbjct: 34 VLVKVVATGMCHTDLIVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSY-G 92
Query: 98 ECKTCRQCKSDKSNTC-EVLGLERRGVMHSDQQTRFSI----KGKPVYHYCAVSSFSEYT 152
C C QC + C E G R +D + ++ +G H+ A SSF+ Y
Sbjct: 93 YCGKCTQCNTGNPAYCSEFFG---RNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYA 149
Query: 153 VVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQG 212
+ VKV+ P+E + N ++ S+ V +G G VGLS
Sbjct: 150 LSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLA 209
Query: 213 AKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272
AK GAS II VD + E AK G T +N + +PV IK ITDGG +++ E G
Sbjct: 210 AKVCGASIIIAVDIVESRLELAKQLGATHVIN-SKTQDPV-AAIKEITDGGVNFALESTG 267
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 108/254 (42%), Gaps = 38/254 (14%)
Query: 40 IRIKVVCTSLCRSDITAWETQAIF------PRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
I ++V S+C +D+ W+ A P + GHE SG+VE+VGPGV G+HV
Sbjct: 28 ILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSL 87
Query: 94 VFIGECKTCRQCKSDKSNTC---EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150
C C C++ + C ++LG++R G F+E
Sbjct: 88 ESHIVCHACPACRTGNYHVCLNTQILGVDRDG------------------------GFAE 123
Query: 151 YTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVA 210
Y VV + A P E + + + +S G +V+I G G +GL A
Sbjct: 124 YVVVPAENAWVNPKDLPFE-VAAILEPFGNAVHTVYAGSGVS-GKSVLITGAGPIGLMAA 181
Query: 211 QGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270
+A GA I+ D NP + A+ + +NP + E + +V++R+T G + E
Sbjct: 182 MVVRASGAGPILVSDPNPYRLAFARPYA-DRLVNPLE--EDLLEVVRRVTGSGVEVLLEF 238
Query: 271 IGDTGMITTALQSC 284
G+ I L +
Sbjct: 239 SGNEAAIHQGLMAL 252
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 31/224 (13%)
Query: 40 IRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIG 97
+R+K+ + LC SD+ +P GHE SG +++VG GV + + G+ V V +
Sbjct: 28 VRVKIASSGLCGSDLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLL 87
Query: 98 ECKTCRQCKSDKSNTC---EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154
C TC +C + C + +G R G F+EY VV
Sbjct: 88 PCFTCPECLKGFYSQCAKYDFIGSRRDG------------------------GFAEYIVV 123
Query: 155 HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAK 214
+ + P+E +++A + V+I G GT+GL Q A
Sbjct: 124 KRKNVFALPTDMPIED--GAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAV 181
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR 258
A GA + +D + EK AK+FG + N ++ + P Q + R
Sbjct: 182 ALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLR 225
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 107/249 (42%), Gaps = 31/249 (12%)
Query: 42 IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
++ + S C SDI A+ R I GHEA G V VG V +F G+ V+
Sbjct: 29 VRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVIV----- 83
Query: 99 CKTCRQCKSDKSNTCEV-LGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157
C + + EV G + Q + + G ++ F EY H
Sbjct: 84 -----PCTTPDWRSLEVQAGFQ--------QHSNGMLAGWKFSNFKD-GVFGEY--FHVN 127
Query: 158 CAVKVSSIAPLEKIXXXXXXXXXXXXXXWN---VADISKGSTVVIFGLGTVGLSVAQGAK 214
A +I P + ++ +ADI G+TV + G+G VGL GAK
Sbjct: 128 DADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAK 187
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD 273
RGA RII V + P + AK +G T+ +N D P++ I +T+G G D + G+
Sbjct: 188 LRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDG--PIESQIMNLTEGKGVDAAIIAGGN 245
Query: 274 TGMITTALQ 282
++ TA++
Sbjct: 246 ADIMATAVK 254
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 29/231 (12%)
Query: 42 IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
++ + S C SDI A+ R I GHEA G V VG V +F G+ V+
Sbjct: 29 VRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVIV----- 83
Query: 99 CKTCRQCKSDKSNTCEV-LGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157
C + + EV G + Q + + G ++ F EY H
Sbjct: 84 -----PCTTPDWRSLEVQAGFQ--------QHSNGMLAGWKFSNFKD-GVFGEY--FHVN 127
Query: 158 CAVKVSSIAPLEKIXXXXXXXXXXXXXXWN---VADISKGSTVVIFGLGTVGLSVAQGAK 214
A +I P + ++ +ADI GS+VV+ G+G VGL GAK
Sbjct: 128 DADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAGAK 187
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGAD 265
RGA RIIGV + P E AK +G T+ LN N V QV+K G D
Sbjct: 188 LRGAGRIIGVGSRPICVEAAKFYGATDILN-YKNGHIVDQVMKLTNGKGVD 237
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 82/211 (38%), Gaps = 28/211 (13%)
Query: 40 IRIKVVCTSLCRSDITA----WETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTV 94
+ +++ +C +D+ A W + P I GHE GIVE VGPGVT G+ V +
Sbjct: 28 VLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPW 87
Query: 95 FIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154
C C C S + CE + +S+ G ++EY
Sbjct: 88 LYSACGHCDYCLSGQETLCE-----------HQKNAGYSVDG----------GYAEYCRA 126
Query: 155 HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAK 214
+ VK+ E+ V G V I+G+G +G Q AK
Sbjct: 127 AADYVVKIPDNLSFEE-AAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAK 185
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
A G + ++ VD EK E AK G +NP
Sbjct: 186 AMGLN-VVAVDIGDEKLELAKELGADLVVNP 215
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 97/230 (42%), Gaps = 27/230 (11%)
Query: 42 IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
++ + S C SDI A+ R I GHEA G V VG V +F G+ V+
Sbjct: 29 VRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVIV----- 83
Query: 99 CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC 158
C + + EV + G Q + + G ++ F EY H
Sbjct: 84 -----PCTTPDWRSLEV----QAGF---PQHSNGMLAGWKFSNFKD-GVFGEY--FHVND 128
Query: 159 AVKVSSIAPLEKIXXXXXXXXXXXXXXWN---VADISKGSTVVIFGLGTVGLSVAQGAKA 215
A +I P + ++ +ADI GS+VV+ G+G VGL GAK
Sbjct: 129 ADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAGAKL 188
Query: 216 RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGAD 265
RGA RIIGV + P E AK +G T+ LN N V QV+K G D
Sbjct: 189 RGAGRIIGVGSRPICVEAAKFYGATDILN-YKNGHIVDQVMKLTNGKGVD 237
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 81/211 (38%), Gaps = 28/211 (13%)
Query: 40 IRIKVVCTSLCRSDITA----WETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTV 94
+ +++ +C +D+ A W + P I GHE GIVE VGPGVT G+ V +
Sbjct: 28 VLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPW 87
Query: 95 FIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154
C C C S + CE + +S+ G ++EY
Sbjct: 88 LYSACGHCDYCLSGQETLCE-----------HQKNAGYSVDG----------GYAEYCRA 126
Query: 155 HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAK 214
+ VK+ E+ V G V I+G+G G Q AK
Sbjct: 127 AADYVVKIPDNLSFEE-AAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGFGHVAVQYAK 185
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
A G + ++ VD EK E AK G +NP
Sbjct: 186 AMGLN-VVAVDIGDEKLELAKELGADLVVNP 215
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 104/248 (41%), Gaps = 29/248 (11%)
Query: 42 IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
++ + + C SDI AI R I GHEA G V VG V +F G+ V+ I
Sbjct: 29 VRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAI-- 86
Query: 99 CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSS--FSEYTVVHS 156
+ T EV +RG Q + + G + + V F E+ V+
Sbjct: 87 --------TPDWRTSEV----QRGY---HQHSGGMLAG---WKFSNVKDGVFGEFFHVND 128
Query: 157 G--CAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAK 214
+ PLE +ADI GS+VV+ G+G VGL GAK
Sbjct: 129 ADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAK 187
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274
RGA RIIGV + P E AK +G T+ LN N V QV+K G D G +
Sbjct: 188 LRGAGRIIGVGSRPICVEAAKFYGATDILN-YKNGHIVDQVMKLTNGKGVDRVIMAGGGS 246
Query: 275 GMITTALQ 282
++ A++
Sbjct: 247 ETLSQAVK 254
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 107/249 (42%), Gaps = 31/249 (12%)
Query: 42 IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
++ + + C SDI AI R I GHEA G V VG V +F G+ V+ I
Sbjct: 29 VRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAI-- 86
Query: 99 CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSS--FSEYTVVHS 156
+ T EV +RG Q + + G + + V F E+ V+
Sbjct: 87 --------TPDWRTSEV----QRG---YHQHSGGMLAG---WKFSNVKDGVFGEFFHVND 128
Query: 157 G--CAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAK 214
+ PLE +ADI G+TV + G+G VGL GAK
Sbjct: 129 ADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELADIELGATVAVLGIGPVGLMAVAGAK 187
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD 273
RGA RII V + P + AK +G T+ +N D P++ I +T+G G D + G+
Sbjct: 188 LRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDG--PIESQIMNLTEGKGVDAAIIAGGN 245
Query: 274 TGMITTALQ 282
++ TA++
Sbjct: 246 ADIMATAVK 254
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 107/249 (42%), Gaps = 31/249 (12%)
Query: 42 IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
++ + + C SDI AI R I GHEA G V VG V +F G+ V+ I
Sbjct: 29 VRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAI-- 86
Query: 99 CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSS--FSEYTVVHS 156
+ T EV +RG Q + + G + + V F E+ V+
Sbjct: 87 --------TPDWRTSEV----QRG---YHQHSGGMLAG---WKFSNVKDGVFGEFFHVND 128
Query: 157 G--CAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAK 214
+ PLE +ADI G+TV + G+G VGL GAK
Sbjct: 129 ADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELADIELGATVAVLGIGPVGLMAVAGAK 187
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD 273
RGA RII V + P + AK +G T+ +N D P++ I +T+G G D + G+
Sbjct: 188 LRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDG--PIESQIMNLTEGKGVDAAIIAGGN 245
Query: 274 TGMITTALQ 282
++ TA++
Sbjct: 246 ADIMATAVK 254
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 103/248 (41%), Gaps = 29/248 (11%)
Query: 42 IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
++ + S C SDI A+ R I GHEA G V VG V +F G+ V+
Sbjct: 29 VRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVIV----- 83
Query: 99 CKTCRQCKSDKSNTCEV-LGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157
C + + EV G + Q + + G ++ F EY H
Sbjct: 84 -----PCTTPDWRSLEVQAGFQ--------QHSNGMLAGWKFSNFKD-GVFGEY--FHVN 127
Query: 158 CAVKVSSIAPLEKIXXXXXXXXXXXXXXWN---VADISKGSTVVIFGLGTVGLSVAQGAK 214
A +I P + ++ +ADI GS+VV+ G+G VGL GAK
Sbjct: 128 DADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAK 187
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274
RGA RIIGV + P E AK +G T+ LN N QV+K G D G +
Sbjct: 188 LRGAGRIIGVGSRPICVEAAKFYGATDILN-YKNGHIEDQVMKLTNGKGVDRVIMAGGGS 246
Query: 275 GMITTALQ 282
++ A++
Sbjct: 247 ETLSQAVK 254
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 97/231 (41%), Gaps = 29/231 (12%)
Query: 42 IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
++ + + C SDI AI R I GHEA G V VG V +F G+ V+ I
Sbjct: 29 VRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAI-- 86
Query: 99 CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSS--FSEYTVVHS 156
+ T EV +RG Q + + G + + V F E+ V+
Sbjct: 87 --------TPDWRTSEV----QRGY---HQHSGGMLAG---WKFSNVKDGVFGEFFHVND 128
Query: 157 G--CAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAK 214
+ PLE +ADI GS+VV+ G+G VGL GAK
Sbjct: 129 ADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELADIQMGSSVVVIGIGAVGLMGIAGAK 187
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGAD 265
RGA RIIGV + P E AK +G T+ LN N V QV+K G D
Sbjct: 188 LRGAGRIIGVGSRPICVEAAKFYGATDILN-YKNGHIVDQVMKLTNGKGVD 237
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 96/253 (37%), Gaps = 32/253 (12%)
Query: 40 IRIKVVCTSLCRSDITAWETQAI-----FPRIFGHEASGIVESVGPGVTEFNEGEHVLTV 94
I +KV LC SDI + A P GHE G V +G GVT F G+ V
Sbjct: 28 ILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVY 87
Query: 95 FIGECKTCRQCKSDKSNTCEV---LGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEY 151
C C C + N C LG+ G+ G P S +EY
Sbjct: 88 GPWGCGACHACARGRENYCTRAADLGITPPGL------------GSP-------GSMAEY 128
Query: 152 TVVHSG-CAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVA 210
+V S V + + P+ + + GST V+ G+G +G
Sbjct: 129 MIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGI 188
Query: 211 QGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFE 269
Q +A A+R+I VD + ++ A+ G + + I+ +T G GA F+
Sbjct: 189 QILRAVSAARVIAVDLDDDRLALAREVGADAAVK---SGAGAADAIRELTGGQGATAVFD 245
Query: 270 CIGDTGMITTALQ 282
+G I TA Q
Sbjct: 246 FVGAQSTIDTAQQ 258
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 99/258 (38%), Gaps = 29/258 (11%)
Query: 12 TCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITA----WETQAIFPRIF 67
T KAAV G+ I++ + + +C +D+ A W + P I
Sbjct: 25 TMKAAVVRAFGKPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFIP 84
Query: 68 GHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
GHE G V +VG GV EG+ V + C CR C CE
Sbjct: 85 GHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCE-----------E 133
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXW 186
T +S+ G + A +F V H + + IAP+
Sbjct: 134 QLNTGYSVNGGFAEYVVADPNF----VGHLPKNIDFNEIAPV-------LCAGVTVYKGL 182
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
V D G VVI G+G +G Q A+A G + + VD + K + A+ G T +N
Sbjct: 183 KVTDTKPGDWVVISGIGGLGHMAVQYARAMGLN-VAAVDIDDRKLDLARRLGATVTVNAK 241
Query: 247 DNNEPVQQVIKRITDGGA 264
+P I++ TDGGA
Sbjct: 242 TVADPA-AYIRKETDGGA 258
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 25/228 (10%)
Query: 40 IRIKVVCTSLCRSDI----TAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTV 94
+ I ++ +C SDI + W+ + I+P I GHE +GI++ VG GV +F G+ V +
Sbjct: 32 VLIDILYAGICHSDIHSAYSEWK-EGIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGC 90
Query: 95 FIGECKTCRQCKSDKSNTCE--VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYT 152
F+ CK C+ CK + C V + H ++ + +S
Sbjct: 91 FVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEP--------------HMGGYSNNI 136
Query: 153 VVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQG 212
VV + V APLEK+ + ++KG+ V + G G +G +
Sbjct: 137 VVDENYVISVDKNAPLEKV-APLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKY 195
Query: 213 AKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRI 259
A A GA + N K + A + GV F +P E + +I I
Sbjct: 196 AVAMGAEVSV-FARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTI 242
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 86/212 (40%), Gaps = 33/212 (15%)
Query: 40 IRIKVVCTSLCRSDITAWETQ---AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFI 96
+R+KV +C SD + A +PR+ GHE G++++VG GV GE V +
Sbjct: 47 VRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDPV 106
Query: 97 GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS 156
C C C K N C L + GV H+D FSEY VV +
Sbjct: 107 VSCGHCYPCSIGKPNVCTTLAV--LGV-HAD------------------GGFSEYAVVPA 145
Query: 157 GCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNV---ADISKGSTVVIFGLGTVGLSVAQGA 213
A K+ E + NV ++ TV+++G G +GL++ Q
Sbjct: 146 KNAWKIP-----EAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVL 200
Query: 214 KA-RGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
K +I D E+ EKAK G +N
Sbjct: 201 KGVYNVKNVIVADRIDERLEKAKESGADWAIN 232
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 105/255 (41%), Gaps = 39/255 (15%)
Query: 40 IRIKVVCTSLCRSDITAWE------TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHV-- 91
+ IKV+ TS+C +D+ +E ++ P+I GHE +G V +GPGV G++V
Sbjct: 31 VLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGDYVSV 90
Query: 92 -LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150
+ G+C CR+ + ++ G++ GV F+E
Sbjct: 91 ETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGV------------------------FAE 126
Query: 151 YTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVA 210
Y VV + K P E +A G +V+I G G +GL
Sbjct: 127 YAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTV---LAGPISGKSVLITGAGPLGLLGI 183
Query: 211 QGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFE 269
AKA GA +I + + + E AK G +NP + E V + + ITDG G D E
Sbjct: 184 AVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVXDITDGNGVDVFLE 241
Query: 270 CIGDTGMITTALQSC 284
G + LQ+
Sbjct: 242 FSGAPKALEQGLQAV 256
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 105/255 (41%), Gaps = 39/255 (15%)
Query: 40 IRIKVVCTSLCRSDITAWE------TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHV-- 91
+ IKV+ TS+C +D+ +E ++ P+I GHE +G V +GPGV G++V
Sbjct: 32 VLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGDYVSV 91
Query: 92 -LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150
+ G+C CR+ + ++ G++ GV F+E
Sbjct: 92 ETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGV------------------------FAE 127
Query: 151 YTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVA 210
Y VV + K P E +A G +V+I G G +GL
Sbjct: 128 YAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTV---LAGPISGKSVLITGAGPLGLLGI 184
Query: 211 QGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFE 269
AKA GA +I + + + E AK G +NP + E V + + ITDG G D E
Sbjct: 185 AVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVXDITDGNGVDVFLE 242
Query: 270 CIGDTGMITTALQSC 284
G + LQ+
Sbjct: 243 FSGAPKALEQGLQAV 257
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 39/255 (15%)
Query: 40 IRIKVVCTSLCRSDITAWE------TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
+ IKV+ TS+C +D+ +E ++ P+I GHE +G V VGPGV + G+++
Sbjct: 32 VLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDLQVGDYISV 91
Query: 94 VFIGECKTCRQCKSDKSNTCE---VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150
C C CK ++ + C+ + G++ GV F+
Sbjct: 92 ETHIVCGKCYACKHNRYHVCQNTKIFGVDMDGV------------------------FAH 127
Query: 151 YTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVA 210
Y +V + A K P E +A G + +I G G +GL
Sbjct: 128 YAIVPAKNAWKNPKDMPPEYAALQEPLGNAVDTV---LAGPIAGRSTLITGAGPLGLLGI 184
Query: 211 QGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFE 269
AKA GA +I + + + + AK G +NP + + PV+ V+ ITDG G + E
Sbjct: 185 AVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPFEED-PVKFVMD-ITDGAGVEVFLE 242
Query: 270 CIGDTGMITTALQSC 284
G + L++
Sbjct: 243 FSGAPKALEQGLKAV 257
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 89/236 (37%), Gaps = 43/236 (18%)
Query: 40 IRIKVVCTSLCRSDITA----WETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVF 95
+++K+ + +C +D+ A W + P I GHE G V +VG GV+ EG+ V +
Sbjct: 30 VQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPW 89
Query: 96 I-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154
+ C C C CE Q T +S+ G + EY V
Sbjct: 90 LYSACGYCEHCLQGWETLCE-----------KQQNTGYSVNG----------GYGEYVVA 128
Query: 155 HSGCA------VKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLS 208
V IAP+ V D G VVI G+G +G
Sbjct: 129 DPNYVGLLPDKVGFVEIAPI-------LCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHV 181
Query: 209 VAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGA 264
Q A+A G R+ VD + K A+ G +N D +P + K I GGA
Sbjct: 182 AVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARD-TDPAAWLQKEI--GGA 233
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 40 IRIKVVCTSLCRSDITAWETQAI------FPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
+R+++ +L D+ W + + P + G + SG+V++VGPGV F G+ V+
Sbjct: 30 VRVRLKAAALNHLDV--WVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVI 87
Query: 94 VFIGECKTCRQCKSDKSNTC---EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150
C C +C + + N C ++LG R G +++E
Sbjct: 88 NPGLSCGRCERCLAGEDNLCPRYQILGEHRHG------------------------TYAE 123
Query: 151 YTVV-HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSV 209
Y V+ + A K +++ E+ + + G V++ G+ G+SV
Sbjct: 124 YVVLPEANLAPKPKNLS-FEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGS-GVSV 181
Query: 210 A--QGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GAD 265
A Q AK GA R+I + +K +AKA G E +N + P + ++R+T G GAD
Sbjct: 182 AAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTHPDWPKE--VRRLTGGKGAD 237
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 100/268 (37%), Gaps = 45/268 (16%)
Query: 8 PQVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITA----WETQAIF 63
PQ T KAAV G + +K+ + +C +D+ A W +
Sbjct: 4 PQ--TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPL 61
Query: 64 PRIFGHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRG 122
P I GHE G V +VG GVT EG+ V + C C C + CE
Sbjct: 62 PFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCE-------- 113
Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA------VKVSSIAPLEKIXXXXX 176
S Q T +S+ G ++EY + V+ + IAP+
Sbjct: 114 ---SQQNTGYSVNG----------GYAEYVLADPNYVGILPKNVEFAEIAPI-------L 153
Query: 177 XXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
+ G V I G+G +G Q A+A G + +D + K E A+
Sbjct: 154 CAGVTVYKGLKQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARK 212
Query: 237 FGVTEFLNPNDNNEPVQQVIKRITDGGA 264
G + +N +PV+ + + I GGA
Sbjct: 213 LGASLTVNAR-QEDPVEAIQRDI--GGA 237
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 80/199 (40%), Gaps = 27/199 (13%)
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
+ GHE GIV+ +G V+ G+ V + F C C C S C +
Sbjct: 57 VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREV-------- 108
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKIXXXXXXXXXXXX 183
+ +S+ G +E +V + AVKV + P+E
Sbjct: 109 ---KNAGYSVDG----------GMAEEAIVVADYAVKVPDGLDPIE--ASSITCAGVTTY 153
Query: 184 XXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
V+ + G VIFG G +G Q AK +++I VD N +K AK G +
Sbjct: 154 KAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVII 213
Query: 244 NPNDNNEPVQQVIKRITDG 262
N D N PV + IK+IT G
Sbjct: 214 NSGDVN-PVDE-IKKITGG 230
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 98/258 (37%), Gaps = 44/258 (17%)
Query: 40 IRIKVVCTSLCRSDITAWETQAIF------PRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
+ +++ +C SD+ +E I P + GHEASG V VG V +G+ V
Sbjct: 31 VLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAV 90
Query: 94 VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVS----SFS 149
C+ C+ CK K N C P +CA + +
Sbjct: 91 EPGVPCRRCQFCKEGKYNLC------------------------PDLTFCATPPDDGNLA 126
Query: 150 EYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSV 209
Y V + K+ LE+ A + G+TV++ G G +GL
Sbjct: 127 RYYVHAADFCHKLPDNVSLEE--GALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVS 184
Query: 210 AQGAKARGASRIIGVDTNPEKCEKAKAFG--VTEFLNPNDNNEPVQQVIKRITDGGADY- 266
AKA GA ++ +P + E AK G VT ++P E +I+RI D
Sbjct: 185 VLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDPAKEEE--SSIIERIRSAIGDLP 241
Query: 267 --SFECIGDTGMITTALQ 282
+ +C G+ IT +
Sbjct: 242 NVTIDCSGNEKCITIGIN 259
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 93/245 (37%), Gaps = 38/245 (15%)
Query: 40 IRIKVVCTSLCRSDITAWET----QAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVF 95
I ++ + SL D ET FP + + SG+VE+VG VT F G+ V++ F
Sbjct: 56 IIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXSGVVEAVGKSVTRFRPGDRVISTF 115
Query: 96 IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVH 155
+ + ++ E LG GV+ SEY V+
Sbjct: 116 APGWLDGLRPGTGRTPAYETLGGAHPGVL------------------------SEYVVLP 151
Query: 156 SGCAVKVSSIAPLEKIXXXXXXXXXXXXXXW----NVADISKGSTVVIFGLGTVGLSVAQ 211
G V AP W + G VV+ G G V L Q
Sbjct: 152 EGWFVA----APKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQ 207
Query: 212 GAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271
AKA GA I+ ++ EK ++A A G +N + + V++V D GAD+ E
Sbjct: 208 IAKATGAEVIV-TSSSREKLDRAFALGADHGINRLEEDW-VERVYALTGDRGADHILEIA 265
Query: 272 GDTGM 276
G G+
Sbjct: 266 GGAGL 270
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 80/199 (40%), Gaps = 27/199 (13%)
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCEVLGLERRGVM 124
+ GHE GIV+ +G V+ G+ V + E C C C S C +
Sbjct: 57 VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREV-------- 108
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKIXXXXXXXXXXXX 183
+ +S+ G +E +V + AVKV + P+E
Sbjct: 109 ---KNAGYSVDG----------GMAEEAIVVADYAVKVPDGLDPIE--ASSITCAGVTTY 153
Query: 184 XXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
V+ + G VIFG G +G Q AK +++I VD N +K AK G +
Sbjct: 154 KAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTI 213
Query: 244 NPNDNNEPVQQVIKRITDG 262
N D N PV + IK+IT G
Sbjct: 214 NSGDVN-PVDE-IKKITGG 230
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 91/237 (38%), Gaps = 28/237 (11%)
Query: 40 IRIKVVCTSLCRSD--ITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIG 97
+ +KV +C +D + E + P GHE GIV G V + G +
Sbjct: 50 LLVKVEACGICGTDRHLLHGEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNI 109
Query: 98 ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157
C C QC++ + N C L R +H D F+EY +V
Sbjct: 110 SCGRCPQCQAGRVNLCRNL---RAIGIHRD------------------GGFAEYVLVPRK 148
Query: 158 CAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARG 217
A ++ L+ + +++ I GSTV I G G +GL Q A+ G
Sbjct: 149 QAFEIPLT--LDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAG 206
Query: 218 ASRIIGVDTNPEKCEKAKAFGVTEFLNPN--DNNEPVQQVIKRITDGGADYSFECIG 272
A+ +I K A+ G T ++P+ D E + + + GG D EC G
Sbjct: 207 ATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVG-LVPGGVDVVIECAG 262
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 97/248 (39%), Gaps = 29/248 (11%)
Query: 42 IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
++ + + C SDI AI R I GHEA G V VG V +F G+ V+ I
Sbjct: 29 VRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAI-- 86
Query: 99 CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSS--FSEYTVVHS 156
+ T EV +RG Q + + G + + V F E+ V+
Sbjct: 87 --------TPDWRTSEV----QRGY---HQHSGGMLAG---WKFSNVKDGVFGEFFHVND 128
Query: 157 G--CAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAK 214
+ PLE +A+I G TV + G+G VGL GA
Sbjct: 129 ADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGAN 187
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274
GA RI V + C+ A +G T+ +N N + V+Q++K G D GD
Sbjct: 188 HLGAGRIFAVGSRKHCCDIALEYGATDIIN-YKNGDIVEQILKATDGKGVDKVVIAGGDV 246
Query: 275 GMITTALQ 282
A++
Sbjct: 247 HTFAQAVK 254
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 44/228 (19%)
Query: 40 IRIKVVCTSLCRSDITAWETQ---AIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTVF 95
+R KV+ +C SD+ + + +++P + GHE G V VG V + N G+ V +
Sbjct: 44 VRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCL 103
Query: 96 IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVH 155
+G C +C C +D N C + L + H T +S + V +
Sbjct: 104 VGACHSCESCANDLENYCPKMILTYASIYHDGTIT--------------YGGYSNHMVAN 149
Query: 156 SGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLS------- 208
++ PL+ A I+ S + FGL G
Sbjct: 150 ERYIIRFPDNMPLD------------GGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLG 197
Query: 209 -----VAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNE 250
+ AKA G S++ + T+P K E+A K FG FL D +
Sbjct: 198 GLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGADSFLVSRDQEQ 244
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 89/231 (38%), Gaps = 30/231 (12%)
Query: 40 IRIKVVCTSLCRSDITAWETQ----AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVF 95
+ I V + +C +D+ AW P + GHE +G+V +G V + G++ +
Sbjct: 33 LLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKW 92
Query: 96 I-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154
+ G C C C+ + C H+D Y SF +Y
Sbjct: 93 LNGSCMACEYCELGNESNCP----------HADLSG-----------YTHDGSFQQYATA 131
Query: 155 HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGL-GTVGLSVAQGA 213
+ A + L ++ A++ G V I G G +G Q A
Sbjct: 132 DAVQAAHIPQGTDLAQVAPILCAGITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYA 190
Query: 214 KARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGA 264
KA G R++G+D K E ++ G F++ + V V+K TDGGA
Sbjct: 191 KAMG-YRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKA-TDGGA 239
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 36/243 (14%)
Query: 40 IRIKVVCTSLCRSDITAW---ETQAIF--PRIFGHEASGIVESVGPGVTEFNEGEHVLTV 94
+ I++ +CR+D+ W E + F P I GHE +G + VG + + +G++V+
Sbjct: 31 VLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGE-LAKVKKGDNVVVY 89
Query: 95 FIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154
TCR C+ K N C K + + FSEY +V
Sbjct: 90 ATWGDLTCRYCREGKFNIC---------------------KNQIIPGQTTNGGFSEYMLV 128
Query: 155 HSG-CAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGS--TVVIFGLGTVGLSVAQ 211
S VK++S++P+E + ISK + V++ G+G + + Q
Sbjct: 129 KSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQ 188
Query: 212 GAKARGAS-RIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFE 269
KA + I+G+ + + + A G D + +I ++TDG GA + +
Sbjct: 189 ILKALMKNITIVGISRSKKHRDFALELGADYVSEMKD----AESLINKLTDGLGASIAID 244
Query: 270 CIG 272
+G
Sbjct: 245 LVG 247
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 98/242 (40%), Gaps = 43/242 (17%)
Query: 40 IRIKVVCTSLCRSDITAWETQ-----------AIFPRIFGHEASGIVESVGPGVTEFNEG 88
+ IK+ +C SD+ + + P GHE +G +E VG V +++G
Sbjct: 28 VLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSKG 87
Query: 89 EHV-LTVFIGE--CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV 145
+ V + + GE C CR + ++ LG+ G
Sbjct: 88 DLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYDG----------------------- 124
Query: 146 SSFSEYTVV-HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGT 204
+++EY +V H K+ ++ +E D SK + VVI G
Sbjct: 125 -AYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSK-TLVVIGAGGG 182
Query: 205 VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-G 263
+G Q AKA + IIGVD E E AK G +N + + +PV + I+RIT G G
Sbjct: 183 LGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINAS-SQDPVSE-IRRITQGKG 240
Query: 264 AD 265
AD
Sbjct: 241 AD 242
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 94/270 (34%), Gaps = 51/270 (18%)
Query: 40 IRIKVVCTSLCRSDITAWETQAI----------FPRIFGHEASGIVESVGPGV------T 83
I IKV +C SD+ +T FP GHE SG+V GP
Sbjct: 58 IIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNK 117
Query: 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYC 143
F GE V C CR C N CE L + F++ G
Sbjct: 118 RFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENL-----------NELGFNVDG------- 159
Query: 144 AVSSFSEYTVVHSGCAVKVSSIAPLEKIXX-----XXXXXXXXXXXXWNV-----ADISK 193
+F+EY V + A S+ LE + +N I
Sbjct: 160 ---AFAEYVKVDAKYA---WSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRP 213
Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ 253
G VVI G G +GL+ K GAS++I + + + AK G ++P N V+
Sbjct: 214 GDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENF-VE 272
Query: 254 QVIKRITDGGADYSFECIGDTGMITTALQS 283
V+ GA E G ++ ++
Sbjct: 273 AVLDYTNGLGAKLFLEATGVPQLVWPQIEE 302
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
+A+I G TV + G+G VGL GA GA RI V + C+ A +G T+ +N
Sbjct: 161 LANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIIN-YK 219
Query: 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQ 282
N + V+Q++K G D GD A++
Sbjct: 220 NGDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVK 254
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 42 IKVVCTSLCRSDITAWETQAIFPR--IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGEC 99
+KVV T++C SD + + I P+ + GHE +G V G V + G+ V F C
Sbjct: 37 LKVVSTNICGSDQHIYRGRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVAC 96
Query: 100 KTCRQCKSDKSNTCE 114
CR CK +S+ CE
Sbjct: 97 GRCRNCKEARSDVCE 111
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
+A+I G TV + G+G VGL GA GA RI V + C+ A +G T+ +N
Sbjct: 161 LANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIIN-YK 219
Query: 248 NNEPVQQVIKRITDGGAD 265
N + V+Q++K G D
Sbjct: 220 NGDIVEQILKATDGKGVD 237
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 32/260 (12%)
Query: 2 STSIKQPQVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWETQ- 60
STS+ + + KA A+ A Q ++I++ +C SD+ ++
Sbjct: 12 STSLYKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEW 71
Query: 61 --AIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLG 117
++P + GHE G V +VG V ++ G+ V + + CK C +C+ N C
Sbjct: 72 AGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYC---- 127
Query: 118 LERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-------SSIAPLEK 170
D T P + +S+ VVH +++ +++APL
Sbjct: 128 ---------DHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPL-- 176
Query: 171 IXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK 230
W K V I GLG +G+ +A A GA ++ T+ K
Sbjct: 177 --LCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAH---AMGA-HVVAFTTSEAK 230
Query: 231 CEKAKAFGVTEFLNPNDNNE 250
E AKA G E +N + +E
Sbjct: 231 REAAKALGADEVVNSRNADE 250
>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase
pdb|1KOL|B Chain B, Crystal Structure Of Formaldehyde Dehydrogenase
Length = 398
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 80/200 (40%), Gaps = 10/200 (5%)
Query: 42 IKVVCTSLCRSD--ITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGEC 99
+KVV T++C SD + T A + GHE +G V G V G+ V F C
Sbjct: 38 LKVVSTNICGSDQHMVRGRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVAC 97
Query: 100 KTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA 159
CR CK + C + R G + G+ Y + F+ + A
Sbjct: 98 GRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKA 157
Query: 160 V-KVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA 218
+ K+ + L I A + GSTV + G G VGL+ A A+ GA
Sbjct: 158 MEKIRDLTCLSDILPTGYHGAV-------TAGVGPGSTVYVAGAGPVGLAAAASARLLGA 210
Query: 219 SRIIGVDTNPEKCEKAKAFG 238
+ +I D NP + AKA G
Sbjct: 211 AVVIVGDLNPARLAHAKAQG 230
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 116 LGLERRGVMHS--DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXX 173
LG E GV+ + D+ TRF + + Y + ++SE V+ VK++ E+
Sbjct: 61 LGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAA 120
Query: 174 XXXXXXXXXXXXWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE 232
+ G ++ G VG Q AKA GA ++IG ++PEK
Sbjct: 121 LMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAA 179
Query: 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDG 262
AKA G E + + ++E V + + +TDG
Sbjct: 180 HAKALGAWETI--DYSHEDVAKRVLELTDG 207
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 83/226 (36%), Gaps = 63/226 (27%)
Query: 64 PRIFGHEASGIVESVGPGVTEFNEGEHVLTV----FIGECKTCRQ---CKSDKSNTCEVL 116
P + G EASG V + G GVT F G+ V + F K Q K K + E L
Sbjct: 64 PYVLGREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEEL 123
Query: 117 GLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXX 176
L G++ F+ YH
Sbjct: 124 KLYAAGLLQVLTALSFT---NEAYH----------------------------------- 145
Query: 177 XXXXXXXXXWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235
+ KG V++F G VGL + Q K +GA I V + EK + AK
Sbjct: 146 --------------VKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAK 190
Query: 236 AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG-DTGMITTA 280
+G E+L + ++QV+K G D SF+ +G DT I+ A
Sbjct: 191 EYG-AEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLA 235
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 94/260 (36%), Gaps = 50/260 (19%)
Query: 40 IRIKVVCTSLCRSDITAWETQAIFPRI------FGHEASGIVESVGPGVTEFNEGEHVLT 93
+ + V T +C SD+ W+ I P I GHE++G V +V P V G+ V
Sbjct: 43 VTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAI 102
Query: 94 VFIGECKTCRQCKSDKSNTCE---------VLGLERRGVMHSDQQTRFSIKGKPVYHYCA 144
C C C + + N CE V GL RR V H P
Sbjct: 103 EPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNH------------PAVWCHK 150
Query: 145 VSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGT 204
+ + S +G ++ S+A A + G V+I G G
Sbjct: 151 IGNMS----YENGAMLEPLSVA----------------LAGLQRAGVRLGDPVLICGAGP 190
Query: 205 VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF---GVTEFLNPNDNNEPVQQVIKRITD 261
+GL AKA GA ++ D + + + AK VT + E +++++
Sbjct: 191 IGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGG 250
Query: 262 GGADYSFECIGDTGMITTAL 281
+ EC G I A+
Sbjct: 251 IEPAVALECTGVESSIAAAI 270
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 95/255 (37%), Gaps = 41/255 (16%)
Query: 40 IRIKVVCTSLCRSDITAWETQAI------FPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
+ +K+ +C SD+ W+ I P + GHEASG V VG V G+ V
Sbjct: 33 VLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQPGDRVAI 92
Query: 94 VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVS----SFS 149
+T CK + N P +CA +
Sbjct: 93 QPGAPRQTDEFCKIGRYNL------------------------SPTIFFCATPPDDGNLC 128
Query: 150 EYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSV 209
+ ++ K+ E+ A ++ G+ V++ G G +GL
Sbjct: 129 RFYKHNANFCYKLPDNVTFEE--GALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVN 186
Query: 210 AQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN-PNDNNEPVQQVIKRITDGGADYSF 268
AKA GA++++ D + + KAK G L N++ E + + ++ + + +
Sbjct: 187 LLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGLLGSKPEVTI 246
Query: 269 ECIGDTGMITTALQS 283
EC G + T++Q+
Sbjct: 247 ECTG----VETSIQA 257
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN-EPV 252
G TVVI G G +GL A++ GA +I + +P + + A+ G LN + + E
Sbjct: 196 GKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEER 255
Query: 253 QQVIKRITDG-GADYSFECIGDT 274
++ I IT G GAD+ E GD+
Sbjct: 256 RKAIMDITHGRGADFILEATGDS 278
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 12/135 (8%)
Query: 142 YCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIF- 200
Y A SF+EYTVV + A V S+ P + + +S+G V++
Sbjct: 93 YMAPGSFAEYTVVPASIATPVPSVKP--EYLTLLVSGTTAYISLKELGGLSEGKKVLVTA 150
Query: 201 ---GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIK 257
G G + +++ AK +IG ++ EK K+ G + N EPV V+K
Sbjct: 151 AAGGTGQFAMQLSKKAKC----HVIGTCSSDEKSAFLKSLGCDRPI--NYKTEPVGTVLK 204
Query: 258 RITDGGADYSFECIG 272
+ G D +E +G
Sbjct: 205 QEYPEGVDVVYESVG 219
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 12/135 (8%)
Query: 142 YCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIF- 200
Y A SF+EYTVV + A V S+ P + + +S+G V++
Sbjct: 114 YMAPGSFAEYTVVPASIATPVPSVKP--EYLTLLVSGTTAYISLKELGGLSEGKKVLVTA 171
Query: 201 ---GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIK 257
G G + +++ AK +IG ++ EK K+ G + N EPV V+K
Sbjct: 172 AAGGTGQFAMQLSKKAKC----HVIGTCSSDEKSAFLKSLGCDRPI--NYKTEPVGTVLK 225
Query: 258 RITDGGADYSFECIG 272
+ G D +E +G
Sbjct: 226 QEYPEGVDVVYESVG 240
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 12/135 (8%)
Query: 142 YCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIF- 200
Y A SF+EYTVV + A V S+ P + + +S+G V++
Sbjct: 122 YMAPGSFAEYTVVPASIATPVPSVKP--EYLTLLVSGTTAYISLKELGGLSEGKKVLVTA 179
Query: 201 ---GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIK 257
G G + +++ AK +IG ++ EK K+ G + N EPV V+K
Sbjct: 180 AAGGTGQFAMQLSKKAKC----HVIGTCSSDEKSAFLKSLGCDRPI--NYKTEPVGTVLK 233
Query: 258 RITDGGADYSFECIG 272
+ G D +E +G
Sbjct: 234 QEYPEGVDVVYESVG 248
>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CD9|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CDA|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
pdb|2CDA|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
Length = 366
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 11/109 (10%)
Query: 40 IRIKVVCTSLCRSD---ITAWETQAIFPR-----IFGHEASGIVESVGPGVTEFNEGEHV 91
I+I+ + +C +D + T + P+ + GHEA G+VE G F++G+ V
Sbjct: 29 IKIRTIYNGICGTDREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEESYHG---FSQGDLV 85
Query: 92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVY 140
+ V C CR C + + CE G+ D R P Y
Sbjct: 86 MPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKY 134
>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDC|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
Length = 366
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 11/109 (10%)
Query: 40 IRIKVVCTSLCRSD---ITAWETQAIFPR-----IFGHEASGIVESVGPGVTEFNEGEHV 91
I+I+ + +C +D + T + P+ + GHEA G+VE G F++G+ V
Sbjct: 29 IKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEESYHG---FSQGDLV 85
Query: 92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVY 140
+ V C CR C + + CE G+ D R P Y
Sbjct: 86 MPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKY 134
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 40 IRIKVVCTSLCRSDITAWETQAI------FPRIFGHEASGIVESVGPGVTEFNEGEHV 91
+ +++ +C SD+ WE I P + GHEASG VE VG V G+ V
Sbjct: 34 VLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRV 91
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250
++ G V++ G G +G+ AKA GA++++ D + + KAK G L + E
Sbjct: 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVL--QISKE 226
Query: 251 PVQQVIKRI 259
Q++ +++
Sbjct: 227 SPQEIARKV 235
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Query: 40 IRIKVVCTSLCRSDITAWETQAI------FPRIFGHEASGIVESVGPGVTEFNEGEHV 91
+ ++ +C SD+ WE I P + GHEASG VE VG V G+ V
Sbjct: 34 VLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVLGHEASGTVEKVGSSVKHLKPGDRV 91
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250
++ G V++ G G +G AKA GA++++ D + + KAK G L + E
Sbjct: 169 VTLGHKVLVCGAGPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVL--QISKE 226
Query: 251 PVQQVIKRI 259
Q++ +++
Sbjct: 227 SPQEIARKV 235
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 64 PRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
P + G EA+ +VE VGPGVT+F GE V T
Sbjct: 61 PIVVGFEAAAVVEEVGPGVTDFTVGERVCT 90
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 91/237 (38%), Gaps = 42/237 (17%)
Query: 40 IRIKVVCTSLCRSDITAWETQ-----------AIFPRIFGHEASGIVESVGPGVTEFNEG 88
+ IKV +C SD+ + + P GHE +G +E VG V +++G
Sbjct: 28 VLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKG 87
Query: 89 EHVLTVFI---GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV 145
+ V + G C CR + ++ LG+ G
Sbjct: 88 DLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGINFDG----------------------- 124
Query: 146 SSFSEYTVV-HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGT 204
+++EY +V H K+ + +E D +K VV G G
Sbjct: 125 -AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGL 183
Query: 205 VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD 261
++V Q AKA + IIGVD E E AK G +N + +P+ + I+RIT+
Sbjct: 184 GTMAV-QIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS-MQDPLAE-IRRITE 237
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 64 PRIFGHEASGIVESVGPGVTEFNEGEHV 91
PR+ G +A G+VESVG VT FN+G+ V
Sbjct: 60 PRVLGFDAIGVVESVGNEVTMFNQGDIV 87
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 42/237 (17%)
Query: 40 IRIKVVCTSLCRSDITAWETQ-----------AIFPRIFGHEASGIVESVGPGVTEFNEG 88
+ IKV +C SD+ + + P GHE +G +E VG V +++G
Sbjct: 28 VLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKG 87
Query: 89 EHV-LTVFIGE--CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV 145
+ V + + GE C CR + ++ LG+ G
Sbjct: 88 DLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDG----------------------- 124
Query: 146 SSFSEYTVV-HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGT 204
+++EY +V H K+ + +E D +K VV G G
Sbjct: 125 -AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGL 183
Query: 205 VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD 261
++V Q AKA + IIGVD E E AK G +N + +P+ + I+RIT+
Sbjct: 184 GTMAV-QIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS-MQDPLAE-IRRITE 237
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 42/237 (17%)
Query: 40 IRIKVVCTSLCRSDITAWETQ-----------AIFPRIFGHEASGIVESVGPGVTEFNEG 88
+ IKV +C SD+ + + P GHE +G +E VG V +++G
Sbjct: 28 VLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKG 87
Query: 89 EHV-LTVFIGE--CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV 145
+ V + + GE C CR + ++ LG+ G
Sbjct: 88 DLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDG----------------------- 124
Query: 146 SSFSEYTVV-HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGT 204
+++EY +V H K+ + +E D +K VV G G
Sbjct: 125 -AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGL 183
Query: 205 VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD 261
++V Q AKA + IIGVD E E AK G +N + +P+ + I+RIT+
Sbjct: 184 GTMAV-QIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS-MQDPLAE-IRRITE 237
>pdb|3IUS|A Chain A, The Structure Of A Functionally Unknown Conserved Protein
From Silicibacter Pomeroyi Dss
pdb|3IUS|B Chain B, The Structure Of A Functionally Unknown Conserved Protein
From Silicibacter Pomeroyi Dss
Length = 286
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP---- 251
T++ FG G +++ +G RIIG NP++ E +A G L P + EP
Sbjct: 7 TLLSFGHGYTARVLSRALAPQG-WRIIGTSRNPDQXEAIRASGAEPLLWPGE--EPSLDG 63
Query: 252 -VQQVIKRITDGGADYSFECIGD 273
+I D G D +GD
Sbjct: 64 VTHLLISTAPDSGGDPVLAALGD 86
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 65 RIFGHEASGIVESVGPGVTEFNEGEHVL 92
++ G++A+GIV +VGP VT F G+ V
Sbjct: 83 KVIGYDAAGIVSAVGPDVTLFRPGDEVF 110
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 42/237 (17%)
Query: 40 IRIKVVCTSLCRSDITAWETQ-----------AIFPRIFGHEASGIVESVGPGVTEFNEG 88
+ IKV +C SD+ + + P GHE +G +E VG V +++G
Sbjct: 28 VLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKG 87
Query: 89 EHV-LTVFIGE--CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV 145
+ V + + GE C CR + ++ LG+ G
Sbjct: 88 DLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDG----------------------- 124
Query: 146 SSFSEYTVV-HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGT 204
+++EY +V H K+ + +E D +K + +V+ G
Sbjct: 125 -AYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTK-TLLVVGAGGG 182
Query: 205 VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD 261
+G Q AKA + IIGVD E E AK G +N + +P+ + I+RIT+
Sbjct: 183 LGTXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS-MQDPLAE-IRRITE 237
>pdb|3GGG|D Chain D, The Crystal Structure Of A. Aeolicus Prephenate
Dehydrogenase In Complex With Tyrosine And Nad+
pdb|3GGG|A Chain A, The Crystal Structure Of A. Aeolicus Prephenate
Dehydrogenase In Complex With Tyrosine And Nad+
pdb|3GGO|A Chain A, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus With Hpp And Nadh
pdb|3GGO|B Chain B, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus With Hpp And Nadh
pdb|3GGO|C Chain C, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus With Hpp And Nadh
pdb|3GGO|D Chain D, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus With Hpp And Nadh
pdb|3GGP|A Chain A, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus In Complex With Hydroxyphenyl Propionate And
Nad+
pdb|3GGP|B Chain B, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus In Complex With Hydroxyphenyl Propionate And
Nad+
pdb|3GGP|C Chain C, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus In Complex With Hydroxyphenyl Propionate And
Nad+
pdb|3GGP|D Chain D, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus In Complex With Hydroxyphenyl Propionate And
Nad+
pdb|3GGG|B Chain B, The Crystal Structure Of A. Aeolicus Prephenate
Dehydrogenase In Complex With Tyrosine And Nad+
pdb|3GGG|C Chain C, The Crystal Structure Of A. Aeolicus Prephenate
Dehydrogenase In Complex With Tyrosine And Nad+
Length = 314
Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGVTE 241
V+I G+G +G S A+ + G +I G D NPE KA G+ +
Sbjct: 35 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIID 81
>pdb|3GG9|A Chain A, Crystal Structure Of Putative D-3-Phosphoglycerate
Dehydrogenase Oxidoreductase From Ralstonia Solanacearum
pdb|3GG9|B Chain B, Crystal Structure Of Putative D-3-Phosphoglycerate
Dehydrogenase Oxidoreductase From Ralstonia Solanacearum
pdb|3GG9|C Chain C, Crystal Structure Of Putative D-3-Phosphoglycerate
Dehydrogenase Oxidoreductase From Ralstonia Solanacearum
pdb|3GG9|D Chain D, Crystal Structure Of Putative D-3-Phosphoglycerate
Dehydrogenase Oxidoreductase From Ralstonia Solanacearum
Length = 352
Score = 30.8 bits (68), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
+ + + KG T+ IFG G +G VA +A G + ++ N ++ +A F V E +
Sbjct: 152 FGIGRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDA 211
Query: 246 NDNNEPVQQVIKRITD 261
V V R+ D
Sbjct: 212 LFEQSDVLSVHLRLND 227
>pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
pdb|3ZWB|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
Length = 742
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235
W A S+V + GLGT+G +A + AR ++ V+++P++ + AK
Sbjct: 308 WKTASAQPVSSVGVLGLGTMGRGIAI-SFARVGISVVAVESDPKQLDAAK 356
>pdb|2G5C|A Chain A, Crystal Structure Of Prephenate Dehydrogenase From Aquifex
Aeolicus
pdb|2G5C|B Chain B, Crystal Structure Of Prephenate Dehydrogenase From Aquifex
Aeolicus
pdb|2G5C|C Chain C, Crystal Structure Of Prephenate Dehydrogenase From Aquifex
Aeolicus
pdb|2G5C|D Chain D, Crystal Structure Of Prephenate Dehydrogenase From Aquifex
Aeolicus
Length = 281
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGVTE 241
V+I G+G G S A+ + G +I G D NPE KA G+ +
Sbjct: 3 NVLIVGVGFXGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIID 49
>pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW8|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW9|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZW9|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZWA|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWA|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWC|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
pdb|3ZWC|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
Length = 742
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235
W A S+V + GLGT+G +A + AR ++ V+++P++ + AK
Sbjct: 308 WKTASAQPVSSVGVLGLGTMGRGIAI-SFARVGISVVAVESDPKQLDAAK 356
>pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa
pdb|2X58|B Chain B, The Crystal Structure Of Mfe1 Liganded With Coa
Length = 727
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235
W A S+V + GLGT+G +A + AR ++ V+++P++ + AK
Sbjct: 293 WKTASAQPVSSVGVLGLGTMGRGIAI-SFARVGISVVAVESDPKQLDAAK 341
>pdb|1ZCJ|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Length = 463
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235
W A S+V + GLGT+G +A + AR ++ V+++P++ + AK
Sbjct: 29 WKTASAQPVSSVGVLGLGTMGRGIAI-SFARVGISVVAVESDPKQLDAAK 77
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 40 IRIKVVCTSLCRSDIT----AWETQAIFPRIFGHEASGIVESVGPGVTE-FNEGEHV-LT 93
I IK+ +C SDI W + P + GHE G V +GP G+ V +
Sbjct: 36 IDIKIEACGVCGSDIHCAAGHWGNMKM-PLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVG 94
Query: 94 VFIGECKTCRQCKSDKSNTC 113
+ C C +CK+D C
Sbjct: 95 AQVFSCLECDRCKNDNEPYC 114
>pdb|4GSK|A Chain A, Crystal Structure Of An Atg7-Atg10 Crosslinked Complex
pdb|4GSK|B Chain B, Crystal Structure Of An Atg7-Atg10 Crosslinked Complex
Length = 615
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 17/74 (22%)
Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249
DI K + V++ G GT+G V++ A G +I VD G + N
Sbjct: 322 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDN-----------GTVSYSN----- 365
Query: 250 EPVQQVIKRITDGG 263
PV+Q + D G
Sbjct: 366 -PVRQALYNFEDAG 378
>pdb|4GSL|A Chain A, Crystal Structure Of An Atg7-Atg3 Crosslinked Complex
pdb|4GSL|B Chain B, Crystal Structure Of An Atg7-Atg3 Crosslinked Complex
Length = 615
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 14/61 (22%)
Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD------TNP--------EKCEKAK 235
DI K + V++ G GT+G V++ A G +I VD +NP E C K K
Sbjct: 322 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPK 381
Query: 236 A 236
A
Sbjct: 382 A 382
>pdb|3VH1|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Atg7 (1-595)
Length = 598
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 14/61 (22%)
Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD------TNP--------EKCEKAK 235
DI K + V++ G GT+G V++ A G +I VD +NP E C K K
Sbjct: 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPK 382
Query: 236 A 236
A
Sbjct: 383 A 383
>pdb|3VH2|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Atg7 (1-613)
Length = 616
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 14/61 (22%)
Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD------TNP--------EKCEKAK 235
DI K + V++ G GT+G V++ A G +I VD +NP E C K K
Sbjct: 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPK 382
Query: 236 A 236
A
Sbjct: 383 A 383
>pdb|3VH3|A Chain A, Crystal Structure Of Atg7ctd-Atg8 Complex
pdb|3VH4|A Chain A, Crystal Structure Of Atg7ctd-Atg8-Mgatp Complex
Length = 340
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 14/61 (22%)
Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD------TNP--------EKCEKAK 235
DI K + V++ G GT+G V++ A G +I VD +NP E C K K
Sbjct: 30 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPK 89
Query: 236 A 236
A
Sbjct: 90 A 90
>pdb|3T7E|A Chain A, Atg8 Transfer From Atg7 To Atg3: A Distinctive E1-E2
Architecture And Mechanism In The Autophagy Pathway
Length = 344
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 14/61 (22%)
Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD------TNP--------EKCEKAK 235
DI K + V++ G GT+G V++ A G +I VD +NP E C K K
Sbjct: 34 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPK 93
Query: 236 A 236
A
Sbjct: 94 A 94
>pdb|3VTF|A Chain A, Structure Of A Udp-Glucose Dehydrogenase From The
Hyperthermophilic Archaeon Pyrobaculum Islandicum
Length = 444
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
S +++ + GLG VG+ A G G R++G D NP E+ +A
Sbjct: 19 SHMASLSVLGLGYVGVVHAVGFALLG-HRVVGYDVNPSIVERLRA 62
>pdb|2WJP|A Chain A, Crystal Structure Of Murd Ligase In Complex With D-Glu
Containing Rhodanine Inhibitor
pdb|2X5O|A Chain A, Discovery Of Novel 5-Benzylidenerhodanine- And
5-Benzylidene- Thiazolidine-2,4-Dione Inhibitors Of Murd
Ligase
pdb|2XPC|A Chain A, Second-Generation Sulfonamide Inhibitors Of Murd: Activity
Optimisation With Conformationally Rigid Analogues Of D-
Glutamic Acid
Length = 439
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 10/91 (10%)
Query: 193 KGSTVVIFGLGTVGLSVAQGAKARGAS-RII-------GVDTNPEKCEKAKAFGVTEFLN 244
+G VVI GLG GLS ARG + R++ G+D PE E+ E+L
Sbjct: 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLM 63
Query: 245 PNDN--NEPVQQVIKRITDGGADYSFECIGD 273
D P + AD E +GD
Sbjct: 64 AADLIVASPGIALAHPSLSAAADAGIEIVGD 94
>pdb|3RUI|A Chain A, Crystal Structure Of Atg7c-Atg8 Complex
Length = 340
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 14/61 (22%)
Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD------TNP--------EKCEKAK 235
DI K + V++ G GT+G V++ A G +I VD +NP E C K K
Sbjct: 30 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPK 89
Query: 236 A 236
A
Sbjct: 90 A 90
>pdb|2JFF|A Chain A, Crystal Structure Of Murd Ligase In Complex With D-Glu
Containing Sulfonamide Inhibitor
pdb|2JFG|A Chain A, Crystal Structure Of Murd Ligase In Complex With Uma And
Adp
pdb|2JFH|A Chain A, Crystal Structure Of Murd Ligase In Complex With L-Glu
Containing Sulfonamide Inhibitor
pdb|2UUO|A Chain A, Crystal Structure Of Murd Ligase In Complex With D-Glu
Containing Sulfonamide Inhibitor
pdb|2UUP|A Chain A, Crystal Structure Of Murd Ligase In Complex With D-Glu
Containing Sulfonamide Inhibitor
pdb|2VTD|A Chain A, Crystal Structure Of Murd Ligase In Complex With D-Glu
Containing Sulfonamide Inhibitor
pdb|2VTE|A Chain A, Crystal Structure Of Murd Ligase In Complex With D-Glu
Containing Sulfonamide Inhibitor
pdb|2Y68|A Chain A, Structure-Based Design Of A New Series Of D-Glutamic Acid-
Based Inhibitors Of Bacterial Murd Ligase
pdb|2Y66|A Chain A, New 5-Benzylidenethiazolidine-4-One Inhibitors Of
Bacterial Murd Ligase: Design, Synthesis, Crystal
Structures, And Biological Evaluation
pdb|2Y67|A Chain A, New 5-Benzylidenethiazolidine-4-One Inhibitors Of
Bacterial Murd Ligase: Design, Synthesis, Crystal
Structures, And Biological Evaluation
pdb|2Y1O|A Chain A, Dual-target Inhibitor Of Murd And Mure Ligases: Design,
Synthesis And Binding Mode Studies
Length = 445
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 10/91 (10%)
Query: 193 KGSTVVIFGLGTVGLSVAQGAKARGAS-RII-------GVDTNPEKCEKAKAFGVTEFLN 244
+G VVI GLG GLS ARG + R++ G+D PE E+ E+L
Sbjct: 5 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLM 64
Query: 245 PNDN--NEPVQQVIKRITDGGADYSFECIGD 273
D P + AD E +GD
Sbjct: 65 AADLIVASPGIALAHPSLSAAADAGIEIVGD 95
>pdb|2UAG|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
pdb|3UAG|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
pdb|4UAG|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
pdb|1UAG|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
Length = 437
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 10/91 (10%)
Query: 193 KGSTVVIFGLGTVGLSVAQGAKARGAS-RII-------GVDTNPEKCEKAKAFGVTEFLN 244
+G VVI GLG GLS ARG + R++ G+D PE E+ E+L
Sbjct: 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLM 63
Query: 245 PNDN--NEPVQQVIKRITDGGADYSFECIGD 273
D P + AD E +GD
Sbjct: 64 AADLIVASPGIALAHPSLSAAADAGIEIVGD 94
>pdb|1E0D|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
pdb|1EEH|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
Length = 437
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 10/91 (10%)
Query: 193 KGSTVVIFGLGTVGLSVAQGAKARGAS-RII-------GVDTNPEKCEKAKAFGVTEFLN 244
+G VVI GLG GLS ARG + R++ G+D PE E+ E+L
Sbjct: 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLM 63
Query: 245 PNDN--NEPVQQVIKRITDGGADYSFECIGD 273
D P + AD E +GD
Sbjct: 64 AADLIVASPGIALAHPSLSAAADAGIEIVGD 94
>pdb|4ECG|A Chain A, Crystal Structure Of A Putative Iron-Regulated Protein A
Precursor (Bdi_2603) From Parabacteroides Distasonis
Atcc 8503 At 2.30 A Resolution
Length = 381
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 223 GVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGA-DYSF-ECIGDTGMITTA 280
G D + E ++ +T+ +NP ++ V Q+ K I A Y F +GDT I TA
Sbjct: 302 GRDLDEESASESSLHALTKXINPTLDSLXVVQIDKTIDAINAIGYPFRNNLGDTEHINTA 361
Query: 281 LQSCCDV 287
++C D+
Sbjct: 362 TEACADL 368
>pdb|1TUF|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase From M.
Jannaschi
pdb|1TUF|B Chain B, Crystal Structure Of Diaminopimelate Decarboxylase From M.
Jannaschi
Length = 434
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRII 222
G + IF +G G+S+A ARG R++
Sbjct: 376 GDVLAIFDVGAYGISMANNYNARGRPRMV 404
>pdb|1TWI|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase From M.
Jannaschii In Co-Complex With L-Lysine
pdb|1TWI|B Chain B, Crystal Structure Of Diaminopimelate Decarboxylase From M.
Jannaschii In Co-Complex With L-Lysine
pdb|1TWI|C Chain C, Crystal Structure Of Diaminopimelate Decarboxylase From M.
Jannaschii In Co-Complex With L-Lysine
pdb|1TWI|D Chain D, Crystal Structure Of Diaminopimelate Decarboxylase From M.
Jannaschii In Co-Complex With L-Lysine
Length = 434
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRII 222
G + IF +G G+S+A ARG R++
Sbjct: 376 GDVLAIFDVGAYGISMANNYNARGRPRMV 404
>pdb|3L4B|C Chain C, Crystal Structure Of An Octomeric Two-Subunit Trka K+
Channel Ring Gating Assembly, Tm1088a:tm1088b, From
Thermotoga Maritima
pdb|3L4B|D Chain D, Crystal Structure Of An Octomeric Two-Subunit Trka K+
Channel Ring Gating Assembly, Tm1088a:tm1088b, From
Thermotoga Maritima
pdb|3L4B|G Chain G, Crystal Structure Of An Octomeric Two-Subunit Trka K+
Channel Ring Gating Assembly, Tm1088a:tm1088b, From
Thermotoga Maritima
pdb|3L4B|H Chain H, Crystal Structure Of An Octomeric Two-Subunit Trka K+
Channel Ring Gating Assembly, Tm1088a:tm1088b, From
Thermotoga Maritima
Length = 218
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 189 ADISKGSTVVIFG-LGTVGLSVAQGA-KARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
A++SK VVI V L +AQ K G R++ + +P E K G+T LN
Sbjct: 61 AEVSKNDVVVILTPRDEVNLFIAQLVMKDFGVKRVVSLVNDPGNMEIFKKMGITTVLN 118
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 57 WETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
+ + + P G + +G++E+VG + F +G+ V T
Sbjct: 81 YSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFT 117
>pdb|2GCG|A Chain A, Ternary Crystal Structure Of Human Glyoxylate
ReductaseHYDROXYPYRUVATE REDUCTASE
pdb|2GCG|B Chain B, Ternary Crystal Structure Of Human Glyoxylate
ReductaseHYDROXYPYRUVATE REDUCTASE
pdb|2GCG|C Chain C, Ternary Crystal Structure Of Human Glyoxylate
ReductaseHYDROXYPYRUVATE REDUCTASE
pdb|2GCG|D Chain D, Ternary Crystal Structure Of Human Glyoxylate
ReductaseHYDROXYPYRUVATE REDUCTASE
pdb|2WWR|A Chain A, Crystal Structure Of Human Glyoxylate Reductase
Hydroxypyruvate Reductase
pdb|2WWR|B Chain B, Crystal Structure Of Human Glyoxylate Reductase
Hydroxypyruvate Reductase
pdb|2WWR|C Chain C, Crystal Structure Of Human Glyoxylate Reductase
Hydroxypyruvate Reductase
pdb|2WWR|D Chain D, Crystal Structure Of Human Glyoxylate Reductase
Hydroxypyruvate Reductase
Length = 330
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235
STV I GLG +G ++A+ K G R + P E A+
Sbjct: 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAE 196
>pdb|2H1S|A Chain A, Crystal Structure Of A GlyoxylateHYDROXYPYRUVATE REDUCTASE
FROM HOMO Sapiens
pdb|2H1S|B Chain B, Crystal Structure Of A GlyoxylateHYDROXYPYRUVATE REDUCTASE
FROM HOMO Sapiens
pdb|2H1S|C Chain C, Crystal Structure Of A GlyoxylateHYDROXYPYRUVATE REDUCTASE
FROM HOMO Sapiens
pdb|2H1S|D Chain D, Crystal Structure Of A GlyoxylateHYDROXYPYRUVATE REDUCTASE
FROM HOMO Sapiens
pdb|2Q50|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of A
GlyoxylateHYDROXYPYRUVATE REDUCTASE FROM HOMO SAPIENS
pdb|2Q50|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of A
GlyoxylateHYDROXYPYRUVATE REDUCTASE FROM HOMO SAPIENS
pdb|2Q50|C Chain C, Ensemble Refinement Of The Protein Crystal Structure Of A
GlyoxylateHYDROXYPYRUVATE REDUCTASE FROM HOMO SAPIENS
pdb|2Q50|D Chain D, Ensemble Refinement Of The Protein Crystal Structure Of A
GlyoxylateHYDROXYPYRUVATE REDUCTASE FROM HOMO SAPIENS
Length = 328
Score = 27.7 bits (60), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235
STV I GLG +G ++A+ K G R + P E A+
Sbjct: 154 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAE 194
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 27.7 bits (60), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 68/202 (33%), Gaps = 53/202 (26%)
Query: 63 FPRIFGHEASGIVESVGPGVTEFNEGEHVLTV--FIGECKTCRQCKSDKSNTCEVLGLER 120
P G EA+GIV VG GV G+ V+ +G + +DK+
Sbjct: 57 LPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILP------ 110
Query: 121 RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXX 180
+ +Q +KG VY+ K I P E+
Sbjct: 111 -AAISFEQAAASFLKGLTVYYLLR----------------KTYEIKPDEQFLFHAAA--- 150
Query: 181 XXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
G VGL Q AKA GA ++IG +K + A G
Sbjct: 151 ----------------------GGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAW 187
Query: 241 EFLNPNDNNEPVQQVIKRITDG 262
+ +N + E + + +K IT G
Sbjct: 188 QVINYRE--EDLVERLKEITGG 207
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,504,036
Number of Sequences: 62578
Number of extensions: 268318
Number of successful extensions: 1009
Number of sequences better than 100.0: 131
Number of HSP's better than 100.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 734
Number of HSP's gapped (non-prelim): 151
length of query: 291
length of database: 14,973,337
effective HSP length: 98
effective length of query: 193
effective length of database: 8,840,693
effective search space: 1706253749
effective search space used: 1706253749
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)