Query 022819
Match_columns 291
No_of_seqs 110 out of 1443
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 06:22:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022819.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022819hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0022 Alcohol dehydrogenase, 100.0 9.9E-53 2.2E-57 362.1 26.1 280 8-287 3-286 (375)
2 COG1064 AdhP Zn-dependent alco 100.0 9.1E-53 2E-57 374.4 25.6 250 11-290 2-255 (339)
3 COG1062 AdhC Zn-dependent alco 100.0 1.8E-52 3.8E-57 365.8 25.4 277 11-290 1-281 (366)
4 KOG0024 Sorbitol dehydrogenase 100.0 1.6E-48 3.4E-53 338.3 23.0 257 11-290 3-269 (354)
5 PLN02827 Alcohol dehydrogenase 100.0 8.4E-46 1.8E-50 342.8 31.6 289 2-290 2-291 (378)
6 KOG0023 Alcohol dehydrogenase, 100.0 9.2E-46 2E-50 320.4 23.1 263 9-290 6-275 (360)
7 PLN02740 Alcohol dehydrogenase 100.0 1.3E-44 2.9E-49 335.2 29.7 287 4-290 2-296 (381)
8 TIGR02818 adh_III_F_hyde S-(hy 100.0 2.2E-44 4.8E-49 332.3 30.5 277 13-290 2-283 (368)
9 cd08300 alcohol_DH_class_III c 100.0 6.4E-44 1.4E-48 329.2 30.5 278 12-290 2-284 (368)
10 cd08301 alcohol_DH_plants Plan 100.0 7.7E-44 1.7E-48 328.6 30.7 280 11-290 1-285 (369)
11 cd08281 liver_ADH_like1 Zinc-d 100.0 7.1E-44 1.5E-48 329.2 30.1 275 13-290 1-286 (371)
12 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.5E-43 3.2E-48 325.5 28.8 269 12-290 1-272 (358)
13 cd08277 liver_alcohol_DH_like 100.0 5.6E-43 1.2E-47 322.6 30.5 279 11-290 1-282 (365)
14 cd08239 THR_DH_like L-threonin 100.0 2.3E-42 4.9E-47 315.1 28.3 253 13-290 1-258 (339)
15 COG0604 Qor NADPH:quinone redu 100.0 2E-42 4.2E-47 313.2 26.1 229 13-290 1-237 (326)
16 PRK09880 L-idonate 5-dehydroge 100.0 1.7E-41 3.7E-46 310.2 27.2 255 10-290 2-262 (343)
17 TIGR02819 fdhA_non_GSH formald 100.0 1.9E-41 4.1E-46 314.9 27.7 260 12-290 2-295 (393)
18 COG1063 Tdh Threonine dehydrog 100.0 1.8E-41 3.8E-46 310.4 26.5 258 13-290 1-265 (350)
19 PLN02586 probable cinnamyl alc 100.0 2.6E-40 5.6E-45 304.3 27.9 269 1-290 1-274 (360)
20 cd08299 alcohol_DH_class_I_II_ 100.0 3E-39 6.5E-44 298.6 30.2 280 10-290 5-288 (373)
21 TIGR03201 dearomat_had 6-hydro 100.0 1.4E-39 3E-44 298.2 26.8 251 16-290 2-268 (349)
22 cd08230 glucose_DH Glucose deh 100.0 1.1E-39 2.3E-44 299.6 25.8 250 13-290 1-265 (355)
23 cd05279 Zn_ADH1 Liver alcohol 100.0 8E-39 1.7E-43 294.9 30.0 277 13-290 1-281 (365)
24 PRK10309 galactitol-1-phosphat 100.0 4.6E-39 1E-43 294.3 28.1 251 13-290 1-256 (347)
25 PLN02178 cinnamyl-alcohol dehy 100.0 8.4E-39 1.8E-43 295.6 27.9 256 14-290 8-269 (375)
26 cd08233 butanediol_DH_like (2R 100.0 2E-38 4.3E-43 290.5 28.3 253 13-290 1-268 (351)
27 TIGR02822 adh_fam_2 zinc-bindi 100.0 2.1E-38 4.5E-43 288.3 26.1 242 15-290 1-250 (329)
28 PLN02514 cinnamyl-alcohol dehy 100.0 9.3E-38 2E-42 287.1 28.3 259 11-290 8-271 (357)
29 KOG1197 Predicted quinone oxid 100.0 3E-38 6.5E-43 265.2 22.3 230 9-290 5-241 (336)
30 cd08278 benzyl_alcohol_DH Benz 100.0 1.3E-37 2.8E-42 286.9 28.4 276 11-290 1-281 (365)
31 cd08231 MDR_TM0436_like Hypoth 100.0 1.7E-37 3.8E-42 285.3 28.6 263 14-290 2-276 (361)
32 cd08285 NADP_ADH NADP(H)-depen 100.0 4.6E-37 1E-41 281.5 28.2 256 13-290 1-262 (351)
33 cd08237 ribitol-5-phosphate_DH 100.0 3.2E-37 6.9E-42 281.8 24.2 238 11-290 1-252 (341)
34 cd08279 Zn_ADH_class_III Class 100.0 2.4E-36 5.3E-41 278.1 29.6 275 13-290 1-278 (363)
35 PRK10083 putative oxidoreducta 100.0 2.2E-36 4.7E-41 275.5 27.8 250 13-290 1-255 (339)
36 cd08256 Zn_ADH2 Alcohol dehydr 100.0 3.4E-36 7.4E-41 275.6 28.7 254 13-290 1-270 (350)
37 cd08296 CAD_like Cinnamyl alco 100.0 3.6E-36 7.8E-41 273.7 28.2 251 13-290 1-255 (333)
38 cd05278 FDH_like Formaldehyde 100.0 3.6E-36 7.7E-41 274.6 27.9 256 13-290 1-263 (347)
39 cd05284 arabinose_DH_like D-ar 100.0 5.3E-36 1.2E-40 272.9 27.4 253 13-290 1-262 (340)
40 cd08286 FDH_like_ADH2 formalde 100.0 2.4E-35 5.2E-40 269.3 27.9 255 13-290 1-262 (345)
41 cd08246 crotonyl_coA_red croto 100.0 1.8E-35 3.9E-40 275.1 27.2 260 9-290 9-311 (393)
42 PLN02702 L-idonate 5-dehydroge 100.0 4.9E-35 1.1E-39 269.5 29.6 258 10-290 15-281 (364)
43 cd08283 FDH_like_1 Glutathione 100.0 4.1E-35 8.8E-40 272.2 28.9 271 13-290 1-302 (386)
44 cd08240 6_hydroxyhexanoate_dh_ 100.0 4.1E-35 9E-40 268.4 27.1 255 13-290 1-270 (350)
45 PRK05396 tdh L-threonine 3-deh 100.0 5.6E-35 1.2E-39 266.6 27.4 252 13-290 1-259 (341)
46 cd08260 Zn_ADH6 Alcohol dehydr 100.0 9.4E-35 2E-39 265.4 28.9 255 13-290 1-260 (345)
47 cd08282 PFDH_like Pseudomonas 100.0 1.1E-34 2.4E-39 268.3 28.0 262 13-290 1-281 (375)
48 cd08238 sorbose_phosphate_red 100.0 9.1E-35 2E-39 271.9 27.4 246 11-290 1-284 (410)
49 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.4E-34 3.1E-39 266.6 28.3 275 13-290 1-283 (367)
50 TIGR01751 crot-CoA-red crotony 100.0 2.1E-34 4.5E-39 268.5 27.6 260 9-290 4-306 (398)
51 cd08261 Zn_ADH7 Alcohol dehydr 100.0 3.5E-34 7.6E-39 260.8 28.4 250 13-290 1-254 (337)
52 cd08284 FDH_like_2 Glutathione 100.0 3.9E-34 8.4E-39 261.0 28.1 256 13-290 1-262 (344)
53 cd08235 iditol_2_DH_like L-idi 100.0 5.1E-34 1.1E-38 260.1 28.5 252 13-290 1-261 (343)
54 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 5.8E-34 1.3E-38 258.6 27.6 253 13-290 1-259 (338)
55 PRK13771 putative alcohol dehy 100.0 2.8E-34 6E-39 261.0 25.0 247 13-290 1-251 (334)
56 cd08287 FDH_like_ADH3 formalde 100.0 9.4E-34 2E-38 258.7 28.3 253 13-290 1-264 (345)
57 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1E-33 2.2E-38 262.7 28.0 245 24-290 38-303 (384)
58 PRK09422 ethanol-active dehydr 100.0 1.2E-33 2.6E-38 257.2 27.5 253 13-290 1-257 (338)
59 cd08242 MDR_like Medium chain 100.0 1.1E-33 2.4E-38 255.5 26.9 240 13-290 1-241 (319)
60 cd05285 sorbitol_DH Sorbitol d 100.0 1.4E-33 2.9E-38 257.7 27.3 251 15-290 1-261 (343)
61 cd05281 TDH Threonine dehydrog 100.0 1.3E-33 2.8E-38 257.7 27.0 251 13-290 1-258 (341)
62 TIGR01202 bchC 2-desacetyl-2-h 100.0 5.3E-34 1.2E-38 257.1 23.3 220 12-290 1-227 (308)
63 cd05283 CAD1 Cinnamyl alcohol 100.0 1.6E-33 3.5E-38 256.7 26.7 255 14-290 1-259 (337)
64 cd08264 Zn_ADH_like2 Alcohol d 100.0 1.8E-33 3.9E-38 254.7 26.8 245 13-290 1-249 (325)
65 cd08236 sugar_DH NAD(P)-depend 100.0 2.8E-33 6E-38 255.4 27.7 251 13-290 1-254 (343)
66 cd08291 ETR_like_1 2-enoyl thi 100.0 1.5E-33 3.1E-38 255.6 25.0 225 13-290 1-238 (324)
67 cd08297 CAD3 Cinnamyl alcohol 100.0 7E-33 1.5E-37 252.5 29.0 253 13-290 1-261 (341)
68 cd08262 Zn_ADH8 Alcohol dehydr 100.0 5.2E-33 1.1E-37 253.4 27.5 242 13-290 1-260 (341)
69 TIGR03366 HpnZ_proposed putati 100.0 1.3E-33 2.9E-38 251.2 22.4 206 66-290 1-214 (280)
70 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1E-32 2.2E-37 249.7 27.5 248 13-290 1-252 (332)
71 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.2E-32 2.6E-37 249.4 27.9 253 13-290 1-261 (342)
72 cd08292 ETR_like_2 2-enoyl thi 100.0 8.3E-33 1.8E-37 249.8 26.1 225 13-290 1-234 (324)
73 cd08234 threonine_DH_like L-th 100.0 1.8E-32 4E-37 248.9 28.0 250 13-290 1-253 (334)
74 cd08294 leukotriene_B4_DH_like 100.0 1.1E-32 2.5E-37 249.5 26.2 221 12-290 2-237 (329)
75 cd08293 PTGR2 Prostaglandin re 100.0 1.1E-32 2.4E-37 251.6 25.9 213 25-290 23-250 (345)
76 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.8E-32 6E-37 245.6 28.0 252 13-290 1-260 (306)
77 cd08245 CAD Cinnamyl alcohol d 100.0 2E-32 4.4E-37 248.3 26.9 248 14-290 1-252 (330)
78 cd08298 CAD2 Cinnamyl alcohol 100.0 2.3E-32 5E-37 247.8 27.0 244 13-290 1-252 (329)
79 TIGR02817 adh_fam_1 zinc-bindi 100.0 2.6E-32 5.5E-37 248.1 24.8 228 14-290 1-243 (336)
80 cd08232 idonate-5-DH L-idonate 100.0 3.6E-32 7.8E-37 247.6 25.8 249 17-290 2-258 (339)
81 KOG0025 Zn2+-binding dehydroge 100.0 1.3E-32 2.9E-37 235.0 20.9 231 9-290 16-259 (354)
82 TIGR00692 tdh L-threonine 3-de 100.0 5.3E-32 1.2E-36 246.9 26.1 246 19-290 5-257 (340)
83 TIGR02825 B4_12hDH leukotriene 100.0 6.4E-32 1.4E-36 245.0 25.7 209 25-290 19-233 (325)
84 PLN03154 putative allyl alcoho 100.0 1.2E-31 2.6E-36 245.7 27.4 228 9-290 5-254 (348)
85 cd08295 double_bond_reductase_ 100.0 1.2E-31 2.7E-36 244.4 24.6 225 12-290 7-247 (338)
86 cd08290 ETR 2-enoyl thioester 100.0 2.2E-31 4.7E-36 242.6 24.6 227 13-290 1-247 (341)
87 PRK10754 quinone oxidoreductas 100.0 6.5E-31 1.4E-35 238.1 26.2 228 12-290 1-235 (327)
88 cd08274 MDR9 Medium chain dehy 100.0 6.8E-31 1.5E-35 240.0 26.1 241 13-290 1-269 (350)
89 PTZ00354 alcohol dehydrogenase 100.0 4.3E-30 9.4E-35 232.7 27.0 227 12-290 1-236 (334)
90 cd08249 enoyl_reductase_like e 100.0 8.4E-31 1.8E-35 239.1 22.0 234 13-290 1-250 (339)
91 cd08276 MDR7 Medium chain dehy 100.0 1.4E-29 3E-34 229.3 28.4 248 13-290 1-255 (336)
92 cd05188 MDR Medium chain reduc 100.0 5.8E-30 1.3E-34 224.5 24.0 223 39-290 1-228 (271)
93 cd08289 MDR_yhfp_like Yhfp put 100.0 1.4E-29 3E-34 229.1 26.1 229 13-290 1-239 (326)
94 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 2E-29 4.4E-34 227.6 26.8 229 13-290 1-239 (325)
95 cd08250 Mgc45594_like Mgc45594 100.0 1.3E-29 2.9E-34 229.6 25.7 224 12-290 1-233 (329)
96 cd08244 MDR_enoyl_red Possible 100.0 1.9E-29 4.1E-34 227.7 26.5 227 13-290 1-237 (324)
97 cd08252 AL_MDR Arginate lyase 100.0 3.8E-29 8.3E-34 227.1 26.1 229 13-290 1-244 (336)
98 cd08248 RTN4I1 Human Reticulon 100.0 1.9E-29 4.2E-34 230.4 24.1 226 13-290 1-253 (350)
99 cd08243 quinone_oxidoreductase 100.0 6.6E-29 1.4E-33 223.3 26.0 228 13-290 1-234 (320)
100 TIGR02823 oxido_YhdH putative 100.0 8.2E-29 1.8E-33 223.9 26.2 227 14-290 1-237 (323)
101 cd05282 ETR_like 2-enoyl thioe 100.0 6.2E-29 1.3E-33 224.2 25.0 214 25-290 14-233 (323)
102 KOG1198 Zinc-binding oxidoredu 100.0 3.4E-29 7.3E-34 227.5 20.9 225 12-289 4-250 (347)
103 cd08270 MDR4 Medium chain dehy 100.0 2.3E-28 5.1E-33 218.9 25.2 215 13-290 1-218 (305)
104 cd08269 Zn_ADH9 Alcohol dehydr 100.0 2.3E-28 5.1E-33 219.4 24.9 216 20-290 3-225 (312)
105 cd08247 AST1_like AST1 is a cy 100.0 4.1E-28 8.9E-33 222.2 26.6 231 14-290 2-255 (352)
106 cd05276 p53_inducible_oxidored 100.0 4.3E-28 9.3E-33 217.3 25.7 226 13-290 1-234 (323)
107 COG2130 Putative NADP-dependen 100.0 2.2E-28 4.7E-33 211.0 21.7 211 25-290 27-245 (340)
108 cd08253 zeta_crystallin Zeta-c 100.0 6.3E-28 1.4E-32 216.6 25.7 231 13-290 1-239 (325)
109 cd05288 PGDH Prostaglandin deh 100.0 7.8E-28 1.7E-32 217.9 25.4 221 13-290 2-240 (329)
110 cd05286 QOR2 Quinone oxidoredu 100.0 1.1E-27 2.5E-32 214.2 26.2 225 14-290 1-231 (320)
111 cd08272 MDR6 Medium chain dehy 100.0 9.5E-28 2.1E-32 215.9 25.8 229 13-290 1-237 (326)
112 cd08271 MDR5 Medium chain dehy 100.0 1.7E-27 3.7E-32 214.6 26.3 228 13-290 1-235 (325)
113 cd08273 MDR8 Medium chain dehy 100.0 1.2E-27 2.6E-32 216.7 25.0 222 13-290 1-229 (331)
114 cd08288 MDR_yhdh Yhdh putative 100.0 2.7E-27 5.8E-32 214.0 25.8 228 13-290 1-238 (324)
115 cd08268 MDR2 Medium chain dehy 100.0 1E-26 2.2E-31 209.2 26.9 231 13-290 1-239 (328)
116 cd08251 polyketide_synthase po 100.0 1.5E-26 3.3E-31 206.0 24.2 208 32-290 2-215 (303)
117 TIGR02824 quinone_pig3 putativ 100.0 2.6E-26 5.6E-31 206.3 25.9 226 13-290 1-234 (325)
118 cd05289 MDR_like_2 alcohol deh 99.9 4E-26 8.7E-31 203.6 23.4 224 13-290 1-234 (309)
119 cd08241 QOR1 Quinone oxidoredu 99.9 1.3E-25 2.9E-30 201.3 25.4 225 13-290 1-234 (323)
120 cd08275 MDR3 Medium chain dehy 99.9 2E-25 4.4E-30 202.0 26.3 224 14-290 1-232 (337)
121 cd05195 enoyl_red enoyl reduct 99.9 1.1E-25 2.3E-30 198.5 22.6 200 38-290 1-205 (293)
122 cd08267 MDR1 Medium chain dehy 99.9 1.4E-25 3E-30 201.5 22.1 213 26-290 15-236 (319)
123 smart00829 PKS_ER Enoylreducta 99.9 5.4E-25 1.2E-29 194.0 22.1 196 42-290 2-201 (288)
124 cd08255 2-desacetyl-2-hydroxye 99.9 1.2E-21 2.5E-26 173.5 18.7 166 62-290 19-186 (277)
125 KOG1196 Predicted NAD-dependen 99.9 9.1E-21 2E-25 163.5 22.5 223 12-290 3-249 (343)
126 PF08240 ADH_N: Alcohol dehydr 99.9 4.1E-22 8.9E-27 152.5 8.5 105 37-162 1-109 (109)
127 KOG1202 Animal-type fatty acid 99.8 6.5E-20 1.4E-24 179.5 11.8 204 25-290 1429-1651(2376)
128 PF00107 ADH_zinc_N: Zinc-bind 99.5 2.4E-13 5.2E-18 106.7 9.5 84 204-290 1-85 (130)
129 PRK09424 pntA NAD(P) transhydr 99.0 3.2E-09 7E-14 101.0 12.3 99 191-290 162-281 (509)
130 cd00401 AdoHcyase S-adenosyl-L 98.6 3.4E-07 7.5E-12 85.2 11.6 94 183-290 190-285 (413)
131 TIGR00561 pntA NAD(P) transhyd 98.4 2.4E-06 5.2E-11 81.4 10.8 98 192-290 162-280 (511)
132 TIGR01035 hemA glutamyl-tRNA r 98.2 1.3E-07 2.7E-12 88.9 -1.8 159 66-275 89-252 (417)
133 PRK05476 S-adenosyl-L-homocyst 98.1 2.8E-05 6E-10 72.8 11.8 95 182-290 199-295 (425)
134 cd05213 NAD_bind_Glutamyl_tRNA 98.1 8.8E-06 1.9E-10 73.6 7.9 109 157-276 139-251 (311)
135 TIGR00936 ahcY adenosylhomocys 98.0 5.1E-05 1.1E-09 70.6 11.5 92 185-290 185-278 (406)
136 COG2518 Pcm Protein-L-isoaspar 98.0 2.6E-05 5.6E-10 65.6 7.5 110 169-290 50-165 (209)
137 PRK08306 dipicolinate synthase 98.0 0.00013 2.7E-09 65.6 12.2 87 193-290 151-237 (296)
138 PLN02494 adenosylhomocysteinas 97.9 8.1E-05 1.8E-09 70.1 11.0 93 184-290 243-337 (477)
139 PRK11873 arsM arsenite S-adeno 97.9 1.8E-05 3.9E-10 70.1 6.1 95 188-290 72-179 (272)
140 PRK00517 prmA ribosomal protei 97.9 0.00023 4.9E-09 62.3 11.8 115 155-290 85-209 (250)
141 PRK12771 putative glutamate sy 97.8 5E-05 1.1E-09 74.2 6.8 81 190-275 133-234 (564)
142 PTZ00075 Adenosylhomocysteinas 97.7 0.00064 1.4E-08 64.3 12.1 92 185-290 244-337 (476)
143 PRK00045 hemA glutamyl-tRNA re 97.6 0.00011 2.4E-09 69.3 6.5 89 177-275 162-254 (423)
144 TIGR00518 alaDH alanine dehydr 97.6 0.0003 6.5E-09 65.2 9.1 91 193-290 166-263 (370)
145 COG4221 Short-chain alcohol de 97.4 0.00099 2.1E-08 57.3 9.3 79 193-273 5-91 (246)
146 TIGR02853 spore_dpaA dipicolin 97.4 0.0012 2.6E-08 59.0 10.2 85 193-288 150-234 (287)
147 PF01488 Shikimate_DH: Shikima 97.4 0.00089 1.9E-08 52.9 8.0 74 192-274 10-86 (135)
148 PRK08324 short chain dehydroge 97.4 0.0012 2.5E-08 66.2 10.4 113 147-272 386-507 (681)
149 PF11017 DUF2855: Protein of u 97.4 0.0095 2.1E-07 53.5 14.8 127 147-286 90-222 (314)
150 PRK11705 cyclopropane fatty ac 97.3 0.0012 2.6E-08 61.4 9.5 102 180-290 154-263 (383)
151 TIGR00406 prmA ribosomal prote 97.3 0.00091 2E-08 59.8 8.2 91 191-290 157-255 (288)
152 PRK00377 cbiT cobalt-precorrin 97.3 0.0022 4.7E-08 54.0 9.4 99 187-290 34-141 (198)
153 PRK13943 protein-L-isoaspartat 97.2 0.0026 5.6E-08 57.7 10.0 100 185-290 72-176 (322)
154 COG2242 CobL Precorrin-6B meth 97.2 0.0032 6.9E-08 52.1 9.4 98 187-290 28-131 (187)
155 TIGR00438 rrmJ cell division p 97.0 0.011 2.4E-07 49.3 10.7 97 188-290 27-142 (188)
156 TIGR02469 CbiT precorrin-6Y C5 97.0 0.0086 1.9E-07 45.7 9.3 98 186-290 12-118 (124)
157 PRK05993 short chain dehydroge 96.9 0.0079 1.7E-07 53.1 10.1 79 193-273 3-86 (277)
158 PRK04148 hypothetical protein; 96.9 0.013 2.8E-07 46.1 9.8 51 191-243 14-64 (134)
159 COG3967 DltE Short-chain dehyd 96.9 0.0067 1.5E-07 50.9 8.6 78 193-273 4-88 (245)
160 PRK06182 short chain dehydroge 96.9 0.0081 1.8E-07 52.8 9.8 79 193-273 2-84 (273)
161 PRK05693 short chain dehydroge 96.8 0.0095 2.1E-07 52.4 9.7 77 195-273 2-82 (274)
162 COG0300 DltE Short-chain dehyd 96.8 0.014 3E-07 51.3 10.3 81 192-273 4-94 (265)
163 PRK13944 protein-L-isoaspartat 96.8 0.0072 1.6E-07 51.2 8.1 98 185-290 64-169 (205)
164 PRK05786 fabG 3-ketoacyl-(acyl 96.8 0.025 5.5E-07 48.3 11.7 79 193-273 4-91 (238)
165 PF01135 PCMT: Protein-L-isoas 96.8 0.002 4.4E-08 54.8 4.7 99 185-290 64-168 (209)
166 PF01262 AlaDh_PNT_C: Alanine 96.7 0.0058 1.3E-07 50.1 7.2 48 193-241 19-66 (168)
167 PRK08177 short chain dehydroge 96.7 0.013 2.9E-07 49.9 9.6 77 195-273 2-81 (225)
168 PRK08017 oxidoreductase; Provi 96.7 0.014 3E-07 50.6 9.7 77 195-273 3-84 (256)
169 COG1748 LYS9 Saccharopine dehy 96.7 0.016 3.5E-07 53.7 10.2 84 195-285 2-89 (389)
170 PRK13942 protein-L-isoaspartat 96.7 0.018 4E-07 49.0 10.0 98 185-290 68-172 (212)
171 PRK06139 short chain dehydroge 96.6 0.011 2.4E-07 53.9 9.0 79 193-273 6-94 (330)
172 PRK13940 glutamyl-tRNA reducta 96.6 0.016 3.5E-07 54.5 10.2 76 192-276 179-255 (414)
173 PF12847 Methyltransf_18: Meth 96.6 0.0042 9.1E-08 46.7 5.3 90 193-290 1-107 (112)
174 PRK07060 short chain dehydroge 96.6 0.021 4.6E-07 49.0 10.3 77 193-273 8-87 (245)
175 PRK03369 murD UDP-N-acetylmura 96.6 0.014 3.1E-07 56.1 10.0 74 191-275 9-82 (488)
176 PF13460 NAD_binding_10: NADH( 96.5 0.041 8.8E-07 45.1 10.7 84 197-288 1-89 (183)
177 PRK06057 short chain dehydroge 96.5 0.026 5.7E-07 49.0 9.9 79 193-273 6-89 (255)
178 PRK12742 oxidoreductase; Provi 96.5 0.032 7E-07 47.6 10.3 77 193-273 5-85 (237)
179 COG4122 Predicted O-methyltran 96.4 0.033 7.1E-07 47.6 9.9 102 187-290 53-162 (219)
180 PRK14967 putative methyltransf 96.4 0.039 8.5E-07 47.3 10.6 94 188-290 31-155 (223)
181 PF02353 CMAS: Mycolic acid cy 96.4 0.0058 1.3E-07 54.2 5.3 95 185-290 54-162 (273)
182 PLN02780 ketoreductase/ oxidor 96.3 0.035 7.6E-07 50.4 10.1 80 193-273 52-142 (320)
183 PRK06949 short chain dehydroge 96.3 0.032 7E-07 48.3 9.5 79 193-273 8-96 (258)
184 PRK06953 short chain dehydroge 96.3 0.038 8.3E-07 46.9 9.7 77 195-273 2-80 (222)
185 PF00670 AdoHcyase_NAD: S-aden 96.3 0.026 5.7E-07 45.8 8.1 89 186-288 14-104 (162)
186 PRK12828 short chain dehydroge 96.3 0.035 7.5E-07 47.3 9.4 79 193-273 6-92 (239)
187 PF02826 2-Hacid_dh_C: D-isome 96.3 0.029 6.3E-07 46.4 8.6 46 192-238 34-79 (178)
188 PRK05872 short chain dehydroge 96.2 0.038 8.2E-07 49.4 9.8 79 193-273 8-95 (296)
189 TIGR00080 pimt protein-L-isoas 96.2 0.01 2.2E-07 50.6 5.8 98 185-290 69-173 (215)
190 PRK07831 short chain dehydroge 96.2 0.06 1.3E-06 46.9 10.7 81 191-273 14-107 (262)
191 TIGR02356 adenyl_thiF thiazole 96.2 0.054 1.2E-06 45.8 10.0 35 193-227 20-54 (202)
192 PRK07814 short chain dehydroge 96.2 0.038 8.3E-07 48.3 9.4 79 193-273 9-97 (263)
193 PRK06200 2,3-dihydroxy-2,3-dih 96.2 0.042 9.1E-07 47.9 9.6 79 193-273 5-90 (263)
194 TIGR01318 gltD_gamma_fam gluta 96.2 0.031 6.7E-07 53.5 9.3 78 193-275 140-238 (467)
195 PRK07326 short chain dehydroge 96.1 0.047 1E-06 46.6 9.6 79 193-273 5-92 (237)
196 PRK12829 short chain dehydroge 96.1 0.039 8.6E-07 47.9 9.3 83 189-273 6-96 (264)
197 TIGR03325 BphB_TodD cis-2,3-di 96.1 0.041 8.9E-07 48.0 9.4 79 193-273 4-89 (262)
198 PLN02476 O-methyltransferase 96.1 0.049 1.1E-06 48.4 9.6 102 186-290 111-224 (278)
199 PRK06841 short chain dehydroge 96.1 0.046 1E-06 47.3 9.4 79 193-273 14-99 (255)
200 PRK08217 fabG 3-ketoacyl-(acyl 96.0 0.081 1.7E-06 45.5 10.7 79 193-273 4-92 (253)
201 PF13602 ADH_zinc_N_2: Zinc-bi 96.0 0.0011 2.3E-08 51.4 -1.1 45 237-290 1-47 (127)
202 PRK06180 short chain dehydroge 96.0 0.052 1.1E-06 47.9 9.6 79 193-273 3-88 (277)
203 PRK12549 shikimate 5-dehydroge 96.0 0.065 1.4E-06 47.8 10.2 42 193-234 126-167 (284)
204 PRK07402 precorrin-6B methylas 96.0 0.085 1.8E-06 44.1 10.4 100 186-290 33-138 (196)
205 PLN02781 Probable caffeoyl-CoA 96.0 0.053 1.2E-06 46.9 9.2 102 186-290 61-174 (234)
206 PRK09291 short chain dehydroge 96.0 0.05 1.1E-06 47.1 9.1 74 194-273 2-83 (257)
207 PLN03209 translocon at the inn 96.0 0.06 1.3E-06 52.4 10.3 48 186-234 72-120 (576)
208 PLN02366 spermidine synthase 96.0 0.074 1.6E-06 48.0 10.3 99 191-290 89-202 (308)
209 PRK12809 putative oxidoreducta 96.0 0.041 8.8E-07 54.8 9.4 76 193-274 309-406 (639)
210 PRK07231 fabG 3-ketoacyl-(acyl 95.9 0.045 9.8E-07 47.1 8.7 79 193-273 4-91 (251)
211 PRK05866 short chain dehydroge 95.9 0.071 1.5E-06 47.6 10.1 79 193-273 39-127 (293)
212 PRK08339 short chain dehydroge 95.9 0.071 1.5E-06 46.7 9.9 79 193-273 7-95 (263)
213 COG2227 UbiG 2-polyprenyl-3-me 95.9 0.056 1.2E-06 46.5 8.7 92 192-290 58-157 (243)
214 PF02254 TrkA_N: TrkA-N domain 95.9 0.14 2.9E-06 38.8 10.2 73 197-274 1-73 (116)
215 PRK07825 short chain dehydroge 95.9 0.075 1.6E-06 46.6 9.9 78 194-273 5-88 (273)
216 COG2230 Cfa Cyclopropane fatty 95.9 0.05 1.1E-06 48.2 8.6 94 183-290 62-172 (283)
217 PRK07806 short chain dehydroge 95.9 0.11 2.3E-06 44.8 10.7 79 193-273 5-94 (248)
218 PRK05867 short chain dehydroge 95.9 0.062 1.4E-06 46.5 9.2 79 193-273 8-96 (253)
219 TIGR01809 Shik-DH-AROM shikima 95.9 0.031 6.7E-07 49.8 7.3 42 193-234 124-165 (282)
220 PRK06505 enoyl-(acyl carrier p 95.9 0.088 1.9E-06 46.4 10.2 79 193-273 6-95 (271)
221 COG2226 UbiE Methylase involve 95.8 0.1 2.2E-06 45.3 10.1 97 186-290 44-152 (238)
222 PRK00107 gidB 16S rRNA methylt 95.8 0.032 6.9E-07 46.6 6.8 93 191-290 43-141 (187)
223 KOG1209 1-Acyl dihydroxyaceton 95.8 0.054 1.2E-06 45.9 8.0 80 192-273 5-91 (289)
224 PRK06196 oxidoreductase; Provi 95.8 0.084 1.8E-06 47.5 10.1 79 193-273 25-109 (315)
225 TIGR01832 kduD 2-deoxy-D-gluco 95.8 0.084 1.8E-06 45.4 9.7 79 193-273 4-90 (248)
226 PRK08261 fabG 3-ketoacyl-(acyl 95.8 0.11 2.4E-06 49.3 11.3 79 193-273 209-294 (450)
227 PRK11207 tellurite resistance 95.8 0.027 5.9E-07 47.3 6.4 94 187-290 24-130 (197)
228 cd01075 NAD_bind_Leu_Phe_Val_D 95.8 0.11 2.5E-06 43.8 10.0 46 193-239 27-73 (200)
229 PRK12939 short chain dehydroge 95.7 0.11 2.5E-06 44.5 10.3 79 193-273 6-94 (250)
230 PRK06500 short chain dehydroge 95.7 0.088 1.9E-06 45.2 9.6 79 193-273 5-90 (249)
231 PRK07062 short chain dehydroge 95.7 0.094 2E-06 45.7 9.8 79 193-273 7-97 (265)
232 PRK07024 short chain dehydroge 95.7 0.092 2E-06 45.6 9.7 78 194-273 2-88 (257)
233 PRK07523 gluconate 5-dehydroge 95.7 0.073 1.6E-06 46.1 9.0 79 193-273 9-97 (255)
234 PRK09072 short chain dehydroge 95.7 0.099 2.1E-06 45.5 9.9 79 193-273 4-90 (263)
235 PRK08267 short chain dehydroge 95.7 0.11 2.4E-06 45.1 10.2 77 195-273 2-87 (260)
236 PRK07677 short chain dehydroge 95.7 0.088 1.9E-06 45.6 9.5 78 194-273 1-88 (252)
237 PRK07533 enoyl-(acyl carrier p 95.7 0.11 2.4E-06 45.3 10.1 79 193-273 9-98 (258)
238 PRK08317 hypothetical protein; 95.7 0.029 6.2E-07 47.9 6.3 98 185-290 11-120 (241)
239 PRK07774 short chain dehydroge 95.7 0.092 2E-06 45.2 9.5 79 193-273 5-93 (250)
240 PRK08703 short chain dehydroge 95.7 0.12 2.5E-06 44.3 10.1 80 193-273 5-97 (239)
241 COG0373 HemA Glutamyl-tRNA red 95.7 0.12 2.5E-06 48.4 10.4 73 192-274 176-249 (414)
242 COG2519 GCD14 tRNA(1-methylade 95.7 0.067 1.5E-06 46.4 8.3 99 185-290 86-191 (256)
243 PRK08265 short chain dehydroge 95.6 0.095 2.1E-06 45.7 9.5 79 193-273 5-90 (261)
244 PRK07454 short chain dehydroge 95.6 0.13 2.8E-06 44.1 10.2 80 192-273 4-93 (241)
245 PRK12769 putative oxidoreducta 95.6 0.06 1.3E-06 53.8 9.1 76 192-273 325-422 (654)
246 PRK06463 fabG 3-ketoacyl-(acyl 95.6 0.1 2.2E-06 45.2 9.6 79 193-273 6-89 (255)
247 PRK08628 short chain dehydroge 95.6 0.087 1.9E-06 45.7 9.2 79 193-273 6-93 (258)
248 PRK07478 short chain dehydroge 95.6 0.099 2.1E-06 45.2 9.5 79 193-273 5-93 (254)
249 PF01596 Methyltransf_3: O-met 95.6 0.025 5.5E-07 47.9 5.4 98 189-290 41-151 (205)
250 PRK05653 fabG 3-ketoacyl-(acyl 95.6 0.13 2.7E-06 43.9 9.9 79 193-273 4-92 (246)
251 PRK07890 short chain dehydroge 95.6 0.1 2.3E-06 45.1 9.5 80 192-273 3-92 (258)
252 PRK07109 short chain dehydroge 95.6 0.16 3.4E-06 46.4 11.0 79 193-273 7-95 (334)
253 cd01065 NAD_bind_Shikimate_DH 95.6 0.11 2.4E-06 41.4 8.9 48 192-239 17-65 (155)
254 PRK06483 dihydromonapterin red 95.5 0.14 2.9E-06 43.8 10.0 78 194-273 2-84 (236)
255 PRK08862 short chain dehydroge 95.5 0.19 4.1E-06 43.1 10.8 78 193-272 4-92 (227)
256 PRK14027 quinate/shikimate deh 95.5 0.16 3.5E-06 45.3 10.6 42 193-234 126-167 (283)
257 PRK07904 short chain dehydroge 95.5 0.14 3.1E-06 44.5 10.2 81 191-273 5-97 (253)
258 PRK06194 hypothetical protein; 95.5 0.099 2.2E-06 46.1 9.3 79 193-273 5-93 (287)
259 PRK01683 trans-aconitate 2-met 95.5 0.13 2.8E-06 45.0 9.8 95 186-290 24-126 (258)
260 PRK12823 benD 1,6-dihydroxycyc 95.5 0.11 2.5E-06 45.0 9.5 79 193-273 7-94 (260)
261 PLN02589 caffeoyl-CoA O-methyl 95.5 0.12 2.5E-06 45.2 9.3 100 188-290 74-186 (247)
262 PF00106 adh_short: short chai 95.5 0.12 2.6E-06 41.5 9.0 79 195-273 1-90 (167)
263 PRK05884 short chain dehydroge 95.5 0.14 3E-06 43.7 9.8 74 196-272 2-78 (223)
264 TIGR03840 TMPT_Se_Te thiopurin 95.5 0.096 2.1E-06 44.7 8.7 96 192-290 33-148 (213)
265 PRK06179 short chain dehydroge 95.5 0.056 1.2E-06 47.3 7.4 77 193-273 3-83 (270)
266 cd01078 NAD_bind_H4MPT_DH NADP 95.5 0.23 5.1E-06 41.4 10.9 75 193-274 27-108 (194)
267 PRK14103 trans-aconitate 2-met 95.5 0.16 3.4E-06 44.4 10.2 94 185-290 21-122 (255)
268 PRK06172 short chain dehydroge 95.5 0.12 2.5E-06 44.7 9.3 79 193-273 6-94 (253)
269 TIGR00477 tehB tellurite resis 95.4 0.05 1.1E-06 45.7 6.7 94 187-290 24-129 (195)
270 PRK06198 short chain dehydroge 95.4 0.15 3.3E-06 44.1 10.1 80 193-273 5-94 (260)
271 PRK05854 short chain dehydroge 95.4 0.13 2.8E-06 46.4 9.9 79 193-273 13-103 (313)
272 PRK06125 short chain dehydroge 95.4 0.2 4.3E-06 43.5 10.8 77 193-273 6-91 (259)
273 PRK07502 cyclohexadienyl dehyd 95.4 0.13 2.8E-06 46.3 9.8 45 195-239 7-52 (307)
274 PLN03075 nicotianamine synthas 95.4 0.082 1.8E-06 47.3 8.2 94 193-290 123-229 (296)
275 TIGR02355 moeB molybdopterin s 95.4 0.17 3.7E-06 44.0 10.1 35 194-228 24-58 (240)
276 PRK07063 short chain dehydroge 95.4 0.12 2.6E-06 44.9 9.3 79 193-273 6-96 (260)
277 cd01483 E1_enzyme_family Super 95.4 0.16 3.6E-06 40.1 9.3 32 196-227 1-32 (143)
278 PRK08589 short chain dehydroge 95.4 0.12 2.5E-06 45.5 9.3 79 193-273 5-92 (272)
279 PRK07576 short chain dehydroge 95.4 0.21 4.5E-06 43.7 10.8 79 193-273 8-96 (264)
280 PRK12481 2-deoxy-D-gluconate 3 95.4 0.2 4.4E-06 43.4 10.7 79 193-273 7-93 (251)
281 PRK00811 spermidine synthase; 95.4 0.081 1.8E-06 47.2 8.2 93 192-290 75-187 (283)
282 KOG0725 Reductases with broad 95.4 0.11 2.4E-06 46.0 8.9 80 192-273 6-99 (270)
283 PRK12475 thiamine/molybdopteri 95.4 0.13 2.8E-06 47.1 9.7 36 193-228 23-58 (338)
284 PRK06138 short chain dehydroge 95.4 0.12 2.6E-06 44.5 9.1 79 193-273 4-91 (252)
285 PRK08643 acetoin reductase; Va 95.4 0.17 3.7E-06 43.7 10.2 78 194-273 2-89 (256)
286 PRK08213 gluconate 5-dehydroge 95.4 0.14 3.1E-06 44.4 9.6 79 193-273 11-99 (259)
287 PRK13394 3-hydroxybutyrate deh 95.4 0.14 2.9E-06 44.4 9.5 79 193-273 6-94 (262)
288 PRK06482 short chain dehydroge 95.3 0.14 3E-06 45.0 9.6 77 195-273 3-86 (276)
289 COG0686 Ald Alanine dehydrogen 95.3 0.05 1.1E-06 48.6 6.5 90 194-290 168-264 (371)
290 PRK05876 short chain dehydroge 95.3 0.14 2.9E-06 45.3 9.5 79 193-273 5-93 (275)
291 cd00755 YgdL_like Family of ac 95.3 0.14 3.1E-06 44.2 9.1 34 194-227 11-44 (231)
292 PRK07832 short chain dehydroge 95.3 0.15 3.2E-06 44.7 9.6 76 196-273 2-88 (272)
293 cd05311 NAD_bind_2_malic_enz N 95.3 0.24 5.2E-06 42.6 10.6 36 192-227 23-60 (226)
294 PRK05717 oxidoreductase; Valid 95.3 0.18 4E-06 43.6 10.1 79 193-273 9-94 (255)
295 PRK08644 thiamine biosynthesis 95.3 0.16 3.5E-06 43.2 9.4 35 193-227 27-61 (212)
296 PRK07688 thiamine/molybdopteri 95.3 0.14 3.1E-06 46.9 9.5 35 193-227 23-57 (339)
297 PRK06079 enoyl-(acyl carrier p 95.2 0.11 2.4E-06 45.1 8.5 79 193-273 6-93 (252)
298 PRK07856 short chain dehydroge 95.2 0.11 2.4E-06 44.9 8.5 75 193-273 5-85 (252)
299 PRK06181 short chain dehydroge 95.2 0.16 3.4E-06 44.2 9.4 77 195-273 2-88 (263)
300 PRK12367 short chain dehydroge 95.2 0.15 3.2E-06 44.4 9.1 73 193-273 13-89 (245)
301 PRK07453 protochlorophyllide o 95.2 0.15 3.3E-06 45.9 9.6 78 193-272 5-92 (322)
302 PF03435 Saccharop_dh: Sacchar 95.2 0.13 2.9E-06 47.8 9.3 72 197-274 1-78 (386)
303 PRK07074 short chain dehydroge 95.2 0.18 4E-06 43.6 9.7 78 194-273 2-87 (257)
304 PRK07035 short chain dehydroge 95.2 0.16 3.5E-06 43.8 9.4 79 193-273 7-95 (252)
305 PRK06101 short chain dehydroge 95.2 0.2 4.2E-06 43.1 9.8 75 195-272 2-80 (240)
306 PRK01581 speE spermidine synth 95.2 0.27 6E-06 45.2 11.0 94 191-290 148-264 (374)
307 PRK08264 short chain dehydroge 95.1 0.11 2.4E-06 44.3 8.2 75 193-273 5-83 (238)
308 PF03446 NAD_binding_2: NAD bi 95.1 0.34 7.3E-06 39.3 10.6 43 196-239 3-45 (163)
309 PRK08226 short chain dehydroge 95.1 0.18 3.8E-06 43.8 9.5 79 193-273 5-92 (263)
310 PRK03562 glutathione-regulated 95.1 0.16 3.4E-06 50.5 10.0 78 194-276 400-477 (621)
311 PRK08251 short chain dehydroge 95.1 0.18 4E-06 43.3 9.5 78 194-273 2-91 (248)
312 PRK07067 sorbitol dehydrogenas 95.1 0.19 4.2E-06 43.5 9.6 79 193-273 5-90 (257)
313 PRK12384 sorbitol-6-phosphate 95.1 0.22 4.8E-06 43.1 10.0 78 194-273 2-91 (259)
314 PRK06914 short chain dehydroge 95.1 0.21 4.6E-06 43.8 10.0 77 194-273 3-91 (280)
315 PRK09186 flagellin modificatio 95.1 0.2 4.3E-06 43.2 9.7 78 193-272 3-92 (256)
316 PRK12548 shikimate 5-dehydroge 95.1 0.23 5E-06 44.4 10.2 36 193-228 125-160 (289)
317 PLN02253 xanthoxin dehydrogena 95.1 0.16 3.5E-06 44.6 9.2 79 193-273 17-104 (280)
318 PRK06197 short chain dehydroge 95.1 0.18 3.9E-06 45.1 9.6 79 193-273 15-105 (306)
319 COG0569 TrkA K+ transport syst 95.1 0.19 4.2E-06 43.2 9.3 73 196-273 2-76 (225)
320 PRK08277 D-mannonate oxidoredu 95.0 0.19 4E-06 44.2 9.5 79 193-273 9-97 (278)
321 PRK06114 short chain dehydroge 95.0 0.19 4E-06 43.6 9.3 79 193-273 7-96 (254)
322 PLN00203 glutamyl-tRNA reducta 95.0 0.14 3.1E-06 49.5 9.2 73 193-274 265-340 (519)
323 PRK12826 3-ketoacyl-(acyl-carr 95.0 0.18 4E-06 43.2 9.2 79 193-273 5-93 (251)
324 PLN02244 tocopherol O-methyltr 95.0 0.048 1E-06 50.0 5.8 90 192-290 117-219 (340)
325 PRK10669 putative cation:proto 95.0 0.18 3.9E-06 49.4 10.1 74 195-273 418-491 (558)
326 PRK08690 enoyl-(acyl carrier p 95.0 0.19 4.2E-06 43.8 9.4 79 193-273 5-94 (261)
327 PRK05690 molybdopterin biosynt 95.0 0.16 3.5E-06 44.3 8.8 35 193-227 31-65 (245)
328 PRK09242 tropinone reductase; 95.0 0.2 4.4E-06 43.4 9.5 79 193-273 8-98 (257)
329 PRK07666 fabG 3-ketoacyl-(acyl 95.0 0.19 4.2E-06 42.9 9.3 80 193-273 6-94 (239)
330 PRK08340 glucose-1-dehydrogena 95.0 0.23 5.1E-06 43.1 9.9 76 196-273 2-86 (259)
331 PRK06124 gluconate 5-dehydroge 95.0 0.23 5.1E-06 42.9 9.9 79 193-273 10-98 (256)
332 PRK06849 hypothetical protein; 95.0 0.21 4.6E-06 46.5 10.1 92 193-286 3-99 (389)
333 PRK05875 short chain dehydroge 95.0 0.29 6.3E-06 42.8 10.5 79 193-273 6-96 (276)
334 PRK04266 fibrillarin; Provisio 95.0 0.3 6.6E-06 42.0 10.3 99 187-290 66-172 (226)
335 PRK08415 enoyl-(acyl carrier p 95.0 0.3 6.5E-06 43.1 10.6 79 193-273 4-93 (274)
336 PRK06603 enoyl-(acyl carrier p 94.9 0.22 4.7E-06 43.5 9.6 79 193-273 7-96 (260)
337 PF01408 GFO_IDH_MocA: Oxidore 94.9 0.45 9.8E-06 36.0 10.2 82 196-288 2-87 (120)
338 PRK12429 3-hydroxybutyrate deh 94.9 0.18 4E-06 43.4 8.9 79 193-273 3-91 (258)
339 TIGR03206 benzo_BadH 2-hydroxy 94.9 0.31 6.8E-06 41.8 10.4 80 193-273 2-90 (250)
340 PRK08993 2-deoxy-D-gluconate 3 94.9 0.22 4.8E-06 43.1 9.5 80 193-273 9-95 (253)
341 PRK11036 putative S-adenosyl-L 94.9 0.27 5.9E-06 42.9 10.0 90 192-290 43-145 (255)
342 PRK15116 sulfur acceptor prote 94.9 0.44 9.6E-06 42.1 11.1 35 193-227 29-63 (268)
343 PRK03659 glutathione-regulated 94.8 0.19 4.2E-06 49.6 9.9 77 195-276 401-477 (601)
344 PRK10538 malonic semialdehyde 94.8 0.22 4.8E-06 42.9 9.2 76 196-273 2-84 (248)
345 PRK06720 hypothetical protein; 94.8 0.42 9.1E-06 39.1 10.3 80 193-273 15-103 (169)
346 CHL00194 ycf39 Ycf39; Provisio 94.8 0.19 4E-06 45.4 8.9 71 196-273 2-74 (317)
347 PRK06398 aldose dehydrogenase; 94.7 0.14 3E-06 44.7 7.7 74 193-273 5-82 (258)
348 KOG1014 17 beta-hydroxysteroid 94.7 0.27 5.9E-06 43.9 9.4 79 192-273 47-136 (312)
349 PRK07102 short chain dehydroge 94.7 0.35 7.7E-06 41.4 10.3 76 195-273 2-86 (243)
350 COG0421 SpeE Spermidine syntha 94.7 0.31 6.8E-06 43.4 9.9 94 195-290 78-186 (282)
351 PRK08762 molybdopterin biosynt 94.7 0.18 4E-06 46.8 8.9 35 193-227 134-168 (376)
352 PRK07577 short chain dehydroge 94.7 0.18 4E-06 42.8 8.4 73 194-273 3-78 (234)
353 PRK08945 putative oxoacyl-(acy 94.7 0.31 6.6E-06 41.9 9.8 82 191-273 9-102 (247)
354 cd00757 ThiF_MoeB_HesA_family 94.7 0.31 6.7E-06 41.9 9.7 33 194-226 21-53 (228)
355 PRK04457 spermidine synthase; 94.7 0.3 6.4E-06 43.1 9.8 92 192-290 65-173 (262)
356 PRK07791 short chain dehydroge 94.7 0.31 6.8E-06 43.2 10.1 80 192-273 4-102 (286)
357 cd01080 NAD_bind_m-THF_DH_Cycl 94.7 0.25 5.3E-06 40.5 8.6 39 191-230 41-80 (168)
358 PRK12936 3-ketoacyl-(acyl-carr 94.7 0.29 6.3E-06 41.8 9.6 79 193-273 5-90 (245)
359 PRK08261 fabG 3-ketoacyl-(acyl 94.7 0.053 1.1E-06 51.4 5.4 59 187-246 27-91 (450)
360 PRK13255 thiopurine S-methyltr 94.7 0.22 4.7E-06 42.7 8.6 97 190-289 34-150 (218)
361 PRK08085 gluconate 5-dehydroge 94.7 0.33 7.1E-06 41.9 10.0 79 193-273 8-96 (254)
362 PRK06484 short chain dehydroge 94.7 0.21 4.6E-06 48.2 9.5 79 193-273 4-89 (520)
363 PRK08159 enoyl-(acyl carrier p 94.7 0.37 8E-06 42.4 10.4 80 192-273 8-98 (272)
364 PF02670 DXP_reductoisom: 1-de 94.7 0.46 9.9E-06 37.1 9.5 92 197-289 1-116 (129)
365 PRK08328 hypothetical protein; 94.6 0.2 4.3E-06 43.3 8.3 35 193-227 26-60 (231)
366 KOG1205 Predicted dehydrogenas 94.6 0.16 3.5E-06 45.1 7.8 80 192-273 10-101 (282)
367 PF08704 GCD14: tRNA methyltra 94.6 0.051 1.1E-06 47.4 4.6 101 185-290 32-142 (247)
368 PRK08287 cobalt-precorrin-6Y C 94.6 0.4 8.6E-06 39.7 9.8 95 186-290 24-127 (187)
369 PRK06935 2-deoxy-D-gluconate 3 94.6 0.27 5.9E-06 42.6 9.2 78 193-273 14-101 (258)
370 PRK06484 short chain dehydroge 94.6 0.31 6.8E-06 47.0 10.5 79 193-273 268-353 (520)
371 PRK08263 short chain dehydroge 94.6 0.29 6.2E-06 43.0 9.4 78 194-273 3-87 (275)
372 PRK01438 murD UDP-N-acetylmura 94.6 0.24 5.1E-06 47.5 9.5 71 193-275 15-90 (480)
373 cd01492 Aos1_SUMO Ubiquitin ac 94.6 0.32 6.9E-06 40.9 9.2 35 193-227 20-54 (197)
374 PF05368 NmrA: NmrA-like famil 94.5 0.3 6.5E-06 41.7 9.2 71 197-273 1-74 (233)
375 PRK05447 1-deoxy-D-xylulose 5- 94.5 0.48 1E-05 43.9 10.9 94 195-289 2-117 (385)
376 PRK06940 short chain dehydroge 94.5 0.37 8.1E-06 42.4 10.0 77 194-273 2-86 (275)
377 PRK00312 pcm protein-L-isoaspa 94.5 0.085 1.8E-06 44.7 5.6 95 186-290 71-171 (212)
378 PF01113 DapB_N: Dihydrodipico 94.5 0.29 6.3E-06 37.9 8.2 33 196-228 2-36 (124)
379 PRK06719 precorrin-2 dehydroge 94.5 0.43 9.2E-06 38.6 9.4 79 193-284 12-90 (157)
380 TIGR00507 aroE shikimate 5-deh 94.5 0.32 7E-06 42.9 9.5 42 192-234 115-156 (270)
381 PRK08303 short chain dehydroge 94.4 0.32 6.8E-06 43.8 9.5 78 193-272 7-105 (305)
382 TIGR00563 rsmB ribosomal RNA s 94.4 0.27 5.9E-06 46.5 9.4 99 186-290 231-364 (426)
383 PRK00536 speE spermidine synth 94.4 0.12 2.6E-06 45.5 6.4 96 192-290 71-167 (262)
384 PTZ00098 phosphoethanolamine N 94.4 0.2 4.4E-06 44.1 8.1 97 185-290 44-152 (263)
385 PRK14903 16S rRNA methyltransf 94.4 0.42 9.2E-06 45.3 10.7 97 187-290 231-362 (431)
386 PF02558 ApbA: Ketopantoate re 94.4 0.025 5.3E-07 45.1 2.0 85 197-286 1-89 (151)
387 PRK12550 shikimate 5-dehydroge 94.4 0.23 4.9E-06 44.1 8.3 45 190-234 118-162 (272)
388 TIGR02354 thiF_fam2 thiamine b 94.4 0.16 3.4E-06 42.9 7.0 35 193-227 20-54 (200)
389 TIGR01963 PHB_DH 3-hydroxybuty 94.4 0.33 7.1E-06 41.7 9.2 77 195-273 2-88 (255)
390 TIGR01470 cysG_Nterm siroheme 94.3 0.63 1.4E-05 39.4 10.6 85 193-287 8-93 (205)
391 cd01487 E1_ThiF_like E1_ThiF_l 94.3 0.31 6.6E-06 40.2 8.4 33 196-228 1-33 (174)
392 COG0144 Sun tRNA and rRNA cyto 94.3 0.3 6.4E-06 45.1 9.1 98 187-290 150-284 (355)
393 PRK10258 biotin biosynthesis p 94.3 0.23 5E-06 43.2 8.1 92 189-290 38-136 (251)
394 PRK05597 molybdopterin biosynt 94.3 0.31 6.7E-06 45.0 9.2 36 193-228 27-62 (355)
395 TIGR03215 ac_ald_DH_ac acetald 94.3 0.53 1.1E-05 42.0 10.4 82 196-287 3-88 (285)
396 PRK00121 trmB tRNA (guanine-N( 94.3 0.53 1.1E-05 39.7 10.0 92 193-290 40-152 (202)
397 PLN00141 Tic62-NAD(P)-related 94.3 0.31 6.8E-06 42.2 8.9 76 193-273 16-95 (251)
398 PRK08278 short chain dehydroge 94.2 0.3 6.4E-06 43.0 8.8 79 193-273 5-100 (273)
399 KOG1201 Hydroxysteroid 17-beta 94.2 0.23 5.1E-06 44.1 7.9 78 193-273 37-124 (300)
400 PRK07097 gluconate 5-dehydroge 94.2 0.41 8.8E-06 41.7 9.6 79 193-273 9-97 (265)
401 PRK12938 acetyacetyl-CoA reduc 94.2 0.26 5.6E-06 42.3 8.2 79 193-273 2-91 (246)
402 PRK06113 7-alpha-hydroxysteroi 94.2 0.39 8.4E-06 41.5 9.4 79 193-273 10-98 (255)
403 PRK06523 short chain dehydroge 94.2 0.26 5.5E-06 42.7 8.2 76 193-273 8-87 (260)
404 TIGR00417 speE spermidine synt 94.2 0.47 1E-05 41.9 9.9 97 192-290 71-182 (270)
405 PRK05600 thiamine biosynthesis 94.2 0.38 8.3E-06 44.6 9.7 35 193-227 40-74 (370)
406 PRK08618 ornithine cyclodeamin 94.2 0.58 1.3E-05 42.5 10.7 86 192-289 125-216 (325)
407 PRK07984 enoyl-(acyl carrier p 94.2 0.48 1E-05 41.5 9.9 79 193-273 5-94 (262)
408 PRK06718 precorrin-2 dehydroge 94.1 0.76 1.7E-05 38.8 10.7 78 193-282 9-88 (202)
409 PF03807 F420_oxidored: NADP o 94.1 1 2.3E-05 32.6 10.2 76 196-284 1-81 (96)
410 TIGR02622 CDP_4_6_dhtase CDP-g 94.1 0.16 3.5E-06 46.3 7.1 77 193-273 3-85 (349)
411 PLN02657 3,8-divinyl protochlo 94.1 0.42 9E-06 44.6 9.8 81 190-273 56-146 (390)
412 PRK08063 enoyl-(acyl carrier p 94.1 0.38 8.3E-06 41.3 9.0 80 193-273 3-92 (250)
413 KOG1207 Diacetyl reductase/L-x 94.1 0.21 4.6E-06 41.0 6.7 44 193-237 6-50 (245)
414 PRK08300 acetaldehyde dehydrog 94.1 0.44 9.5E-06 42.8 9.4 87 195-287 5-94 (302)
415 PRK05650 short chain dehydroge 94.1 0.38 8.2E-06 42.0 9.1 76 196-273 2-87 (270)
416 PRK07574 formate dehydrogenase 94.1 0.42 9.2E-06 44.5 9.7 45 193-238 191-235 (385)
417 PRK12743 oxidoreductase; Provi 94.0 0.56 1.2E-05 40.6 10.0 78 194-273 2-90 (256)
418 TIGR00138 gidB 16S rRNA methyl 94.0 0.29 6.3E-06 40.6 7.7 89 193-290 42-138 (181)
419 PLN02233 ubiquinone biosynthes 94.0 0.36 7.7E-06 42.5 8.7 96 187-290 67-178 (261)
420 PRK07792 fabG 3-ketoacyl-(acyl 94.0 0.46 1E-05 42.6 9.6 79 193-273 11-99 (306)
421 PRK06128 oxidoreductase; Provi 94.0 0.39 8.4E-06 42.9 9.1 79 193-273 54-144 (300)
422 KOG4022 Dihydropteridine reduc 93.9 0.34 7.4E-06 39.3 7.6 73 195-273 4-82 (236)
423 PF07021 MetW: Methionine bios 93.9 0.58 1.3E-05 39.1 9.2 70 191-268 11-80 (193)
424 PRK08219 short chain dehydroge 93.9 0.33 7.2E-06 40.9 8.1 74 195-273 4-81 (227)
425 TIGR00446 nop2p NOL1/NOP2/sun 93.9 0.93 2E-05 39.9 11.1 97 188-290 66-195 (264)
426 PRK08594 enoyl-(acyl carrier p 93.9 0.54 1.2E-05 41.0 9.6 79 193-273 6-97 (257)
427 PRK08223 hypothetical protein; 93.9 0.28 6.1E-06 43.7 7.7 35 193-227 26-60 (287)
428 PRK00258 aroE shikimate 5-dehy 93.9 0.19 4.1E-06 44.6 6.7 44 192-235 121-164 (278)
429 PF00899 ThiF: ThiF family; I 93.8 0.29 6.3E-06 38.3 7.1 33 194-226 2-34 (135)
430 PLN03139 formate dehydrogenase 93.8 0.44 9.6E-06 44.4 9.3 45 193-238 198-242 (386)
431 PLN02823 spermine synthase 93.8 0.45 9.8E-06 43.5 9.2 96 193-290 103-216 (336)
432 PRK05557 fabG 3-ketoacyl-(acyl 93.8 0.64 1.4E-05 39.5 9.9 79 193-273 4-93 (248)
433 PRK07775 short chain dehydroge 93.8 0.78 1.7E-05 40.2 10.6 79 193-273 9-97 (274)
434 PF13659 Methyltransf_26: Meth 93.8 0.24 5.2E-06 37.3 6.4 90 194-290 1-111 (117)
435 COG2264 PrmA Ribosomal protein 93.7 0.41 8.9E-06 42.9 8.6 124 156-290 129-259 (300)
436 PRK11088 rrmA 23S rRNA methylt 93.7 0.67 1.5E-05 40.9 10.1 89 192-290 84-177 (272)
437 PRK07370 enoyl-(acyl carrier p 93.7 0.42 9.1E-06 41.6 8.7 79 193-273 5-97 (258)
438 PRK07424 bifunctional sterol d 93.7 0.45 9.7E-06 44.7 9.3 74 193-273 177-255 (406)
439 PRK09496 trkA potassium transp 93.7 0.53 1.2E-05 44.6 10.0 77 193-273 230-307 (453)
440 PRK06997 enoyl-(acyl carrier p 93.7 0.71 1.5E-05 40.3 10.1 79 193-273 5-94 (260)
441 COG0169 AroE Shikimate 5-dehyd 93.7 0.2 4.4E-06 44.6 6.6 43 193-235 125-167 (283)
442 PRK00216 ubiE ubiquinone/menaq 93.6 0.54 1.2E-05 40.1 9.1 95 188-290 46-154 (239)
443 PRK08416 7-alpha-hydroxysteroi 93.6 0.63 1.4E-05 40.4 9.5 78 193-272 7-96 (260)
444 PRK11933 yebU rRNA (cytosine-C 93.6 0.98 2.1E-05 43.2 11.3 96 190-290 110-238 (470)
445 PRK12937 short chain dehydroge 93.5 0.64 1.4E-05 39.7 9.4 80 193-273 4-93 (245)
446 PRK06171 sorbitol-6-phosphate 93.5 0.28 6E-06 42.7 7.2 76 193-273 8-87 (266)
447 TIGR00452 methyltransferase, p 93.5 0.26 5.7E-06 44.6 7.1 95 185-290 113-221 (314)
448 TIGR02752 MenG_heptapren 2-hep 93.5 0.21 4.6E-06 42.7 6.3 97 186-290 38-147 (231)
449 PRK02472 murD UDP-N-acetylmura 93.5 0.45 9.7E-06 45.1 9.1 72 193-274 4-79 (447)
450 PRK11188 rrmJ 23S rRNA methylt 93.5 0.86 1.9E-05 38.7 9.9 94 191-290 49-161 (209)
451 PRK12335 tellurite resistance 93.5 0.13 2.9E-06 45.8 5.1 87 193-290 120-219 (287)
452 TIGR02415 23BDH acetoin reduct 93.5 0.57 1.2E-05 40.3 9.1 77 195-273 1-87 (254)
453 TIGR00715 precor6x_red precorr 93.5 0.41 8.9E-06 42.0 8.0 73 196-273 2-75 (256)
454 TIGR01505 tartro_sem_red 2-hyd 93.5 0.62 1.3E-05 41.5 9.4 43 196-239 1-43 (291)
455 TIGR01289 LPOR light-dependent 93.5 0.86 1.9E-05 41.0 10.5 78 194-273 3-91 (314)
456 PRK09496 trkA potassium transp 93.4 0.66 1.4E-05 43.9 10.1 73 196-273 2-75 (453)
457 PRK12745 3-ketoacyl-(acyl-carr 93.4 0.73 1.6E-05 39.7 9.6 77 195-273 3-90 (256)
458 TIGR02632 RhaD_aldol-ADH rhamn 93.4 0.49 1.1E-05 47.5 9.5 79 193-273 413-503 (676)
459 PRK09135 pteridine reductase; 93.4 0.75 1.6E-05 39.3 9.6 79 193-273 5-95 (249)
460 PRK07417 arogenate dehydrogena 93.4 0.56 1.2E-05 41.6 9.0 43 196-239 2-44 (279)
461 PRK05855 short chain dehydroge 93.4 0.5 1.1E-05 45.9 9.4 79 193-273 314-402 (582)
462 PRK14175 bifunctional 5,10-met 93.3 0.59 1.3E-05 41.6 8.9 51 192-245 156-208 (286)
463 PRK06701 short chain dehydroge 93.3 0.6 1.3E-05 41.5 9.1 80 192-273 44-134 (290)
464 PF13241 NAD_binding_7: Putati 93.3 0.49 1.1E-05 35.3 7.2 80 193-288 6-85 (103)
465 PLN02336 phosphoethanolamine N 93.3 0.18 3.8E-06 48.3 6.0 95 187-290 260-365 (475)
466 COG0031 CysK Cysteine synthase 93.3 1.9 4.2E-05 38.6 12.0 61 186-246 54-116 (300)
467 PRK05565 fabG 3-ketoacyl-(acyl 93.2 0.88 1.9E-05 38.7 9.8 78 194-273 5-93 (247)
468 PRK14902 16S rRNA methyltransf 93.2 0.59 1.3E-05 44.4 9.3 97 187-290 244-375 (444)
469 COG0287 TyrA Prephenate dehydr 93.2 0.73 1.6E-05 41.0 9.3 46 194-239 3-49 (279)
470 PRK13984 putative oxidoreducta 93.2 0.56 1.2E-05 46.4 9.5 78 191-273 280-378 (604)
471 PRK13403 ketol-acid reductoiso 93.2 0.88 1.9E-05 41.3 9.7 83 192-288 14-100 (335)
472 PF08241 Methyltransf_11: Meth 93.1 0.2 4.3E-06 35.7 4.8 83 199-290 2-93 (95)
473 PLN02989 cinnamyl-alcohol dehy 93.1 0.68 1.5E-05 41.6 9.3 39 192-231 3-42 (325)
474 COG4106 Tam Trans-aconitate me 93.1 0.65 1.4E-05 39.5 8.2 96 186-290 23-125 (257)
475 PRK07066 3-hydroxybutyryl-CoA 93.0 1.4 3E-05 40.1 11.0 39 195-234 8-46 (321)
476 PRK05708 2-dehydropantoate 2-r 93.0 0.35 7.5E-06 43.6 7.2 85 196-284 4-90 (305)
477 TIGR01829 AcAcCoA_reduct aceto 93.0 0.84 1.8E-05 38.8 9.3 77 195-273 1-88 (242)
478 TIGR00091 tRNA (guanine-N(7)-) 93.0 1.2 2.5E-05 37.3 9.9 92 193-290 16-128 (194)
479 PF02737 3HCDH_N: 3-hydroxyacy 93.0 0.32 6.9E-06 40.3 6.3 40 196-236 1-40 (180)
480 PLN02490 MPBQ/MSBQ methyltrans 93.0 0.42 9.1E-06 43.8 7.6 92 192-290 112-211 (340)
481 PRK08220 2,3-dihydroxybenzoate 92.9 0.63 1.4E-05 40.0 8.4 74 193-273 7-86 (252)
482 PRK08936 glucose-1-dehydrogena 92.9 1.2 2.5E-05 38.7 10.1 79 193-273 6-95 (261)
483 PRK13243 glyoxylate reductase; 92.8 0.7 1.5E-05 42.2 8.8 37 193-230 149-185 (333)
484 cd02440 AdoMet_MTases S-adenos 92.8 0.59 1.3E-05 33.2 7.0 86 197-290 2-100 (107)
485 PRK07889 enoyl-(acyl carrier p 92.8 1.2 2.6E-05 38.7 10.1 79 193-273 6-95 (256)
486 PLN02986 cinnamyl-alcohol dehy 92.8 0.89 1.9E-05 40.9 9.5 38 193-231 4-42 (322)
487 PRK03612 spermidine synthase; 92.8 0.8 1.7E-05 44.5 9.7 97 192-290 296-411 (521)
488 PRK08642 fabG 3-ketoacyl-(acyl 92.8 1.3 2.9E-05 37.9 10.3 79 193-273 4-91 (253)
489 PRK14806 bifunctional cyclohex 92.8 0.62 1.3E-05 47.2 9.3 45 195-239 4-49 (735)
490 PRK15469 ghrA bifunctional gly 92.7 0.71 1.5E-05 41.8 8.7 36 193-229 135-170 (312)
491 PRK07878 molybdopterin biosynt 92.7 0.53 1.1E-05 44.0 8.1 35 193-227 41-75 (392)
492 PLN02256 arogenate dehydrogena 92.7 1.7 3.6E-05 39.2 11.0 53 185-239 27-79 (304)
493 PRK07819 3-hydroxybutyryl-CoA 92.7 0.75 1.6E-05 41.0 8.7 39 195-234 6-44 (286)
494 PRK11559 garR tartronate semia 92.7 1.1 2.4E-05 39.9 9.9 43 196-239 4-46 (296)
495 COG1179 Dinucleotide-utilizing 92.7 1.1 2.4E-05 38.7 9.2 93 193-286 29-144 (263)
496 PRK12825 fabG 3-ketoacyl-(acyl 92.7 1 2.2E-05 38.2 9.4 78 193-272 5-93 (249)
497 PF01209 Ubie_methyltran: ubiE 92.7 0.28 6E-06 42.5 5.7 97 186-290 40-149 (233)
498 PRK14106 murD UDP-N-acetylmura 92.6 0.74 1.6E-05 43.7 9.1 71 193-274 4-79 (450)
499 PRK05134 bifunctional 3-demeth 92.6 0.59 1.3E-05 40.0 7.8 94 189-290 44-147 (233)
500 PRK06522 2-dehydropantoate 2-r 92.6 0.41 8.9E-06 42.7 7.0 83 196-285 2-87 (304)
No 1
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.9e-53 Score=362.11 Aligned_cols=280 Identities=56% Similarity=1.017 Sum_probs=268.5
Q ss_pred CcceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCC
Q 022819 8 PQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE 84 (291)
Q Consensus 8 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~ 84 (291)
....++||.+++++++||.++|+.+++|+.+||+||++++++|.+|...|.|.. .+|.++|||++|+|+.+|..|.+
T Consensus 3 gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~ 82 (375)
T KOG0022|consen 3 GKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTT 82 (375)
T ss_pred CCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccc
Confidence 356899999999999999999999999999999999999999999999999885 78999999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCccccCCCCCcccccccc-ccccccCCcccceeccCCccccccCccceeeEEEeeccceEECC
Q 022819 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (291)
Q Consensus 85 ~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip 163 (291)
+++||+|+......|+.|.+|++++.|.|.....+ ..+.+.+||..|+.+||..+|||.+..+|+||.+++...+++|+
T Consensus 83 vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId 162 (375)
T KOG0022|consen 83 VKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID 162 (375)
T ss_pred cCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence 99999999999999999999999999999988876 47788789999999999999999999999999999999999999
Q ss_pred CCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEe
Q 022819 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (291)
Q Consensus 164 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i 243 (291)
+..+++.++++.|.++|+|.++++.+++++|+++.|+|.|++|+++++-||+.|+.+||++|.+++|.++++++|++.++
T Consensus 163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~i 242 (375)
T KOG0022|consen 163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFI 242 (375)
T ss_pred CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccC
Q 022819 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDV 287 (291)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~ 287 (291)
|..+......+.+.+.|++++|..|||+|..+.+.+++..+.+|
T Consensus 243 Np~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~G 286 (375)
T KOG0022|consen 243 NPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKG 286 (375)
T ss_pred ChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcC
Confidence 99865567899999999999999999999999999999999887
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=9.1e-53 Score=374.35 Aligned_cols=250 Identities=32% Similarity=0.485 Sum_probs=233.7
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCC
Q 022819 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (291)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~ 87 (291)
++|||+++.++++|+++++++.|+|+++||+|+|+++|+|.+|++.++|.. .+|+++|||.+|+|+++|++|++|++
T Consensus 2 ~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k~ 81 (339)
T COG1064 2 MTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLKV 81 (339)
T ss_pred cceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCCC
Confidence 679999999999999999999999999999999999999999999999988 68999999999999999999999999
Q ss_pred CCEEEe-ecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 88 GEHVLT-VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 88 GdrV~~-~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
||||.+ +...+|+.|.+|+++++++|+.... .|+. .+| +|+||++++++++++||+++
T Consensus 82 GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~--~gy~-~~G------------------Gyaeyv~v~~~~~~~iP~~~ 140 (339)
T COG1064 82 GDRVGVGWLVISCGECEYCRSGNENLCPNQKI--TGYT-TDG------------------GYAEYVVVPARYVVKIPEGL 140 (339)
T ss_pred CCEEEecCccCCCCCCccccCcccccCCCccc--ccee-ecC------------------cceeEEEEchHHeEECCCCC
Confidence 999988 8899999999999999999999766 4544 444 99999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~ 246 (291)
++++||.+.|+..|.|+++ +..+++++++|+|.|.|++|++++|+|+++|+ +|++++++++|++.++++|++++++.+
T Consensus 141 d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 141 DLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS 218 (339)
T ss_pred ChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC
Confidence 9999999999999999986 45999999999999999999999999999998 999999999999999999999999976
Q ss_pred CCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 247 ~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+ .+..+.+++. +|+++|+++ +..++.+++.|+++|++
T Consensus 219 ~--~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~G~~ 255 (339)
T COG1064 219 D--SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRGGTL 255 (339)
T ss_pred C--chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcCCEE
Confidence 4 6666666663 999999999 89999999999999986
No 3
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=1.8e-52 Score=365.85 Aligned_cols=277 Identities=47% Similarity=0.844 Sum_probs=264.5
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCCC
Q 022819 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEG 88 (291)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~G 88 (291)
|+++|.+++++++||+++|+.+++|++|||+||+.++|+|.+|...++|.. .+|.++|||++|+|++||+.|+.++||
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~~P~vLGHEgAGiVe~VG~gVt~vkpG 80 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEGFPAVLGHEGAGIVEAVGEGVTSVKPG 80 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCCCceecccccccEEEEecCCccccCCC
Confidence 467999999999999999999999999999999999999999999999988 789999999999999999999999999
Q ss_pred CEEEeecccCCCCCccccCCCCCcccccc-ccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCC
Q 022819 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLG-LERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (291)
Q Consensus 89 drV~~~~~~~~~~c~~~~~~~~~~c~~~~-~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~ 167 (291)
|+|+.....+|+.|..|.++++++|.... .+..|.+ .||..|+..++...+++.+.++|++|..++..+++++++..+
T Consensus 81 DhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p 159 (366)
T COG1062 81 DHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAP 159 (366)
T ss_pred CEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCCC
Confidence 99999999999999999999999999544 4467777 899999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCC
Q 022819 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (291)
Q Consensus 168 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~ 247 (291)
++.++++.|...|++.++.+.++++++++|.|+|.|++|++++|-|+..|+.+||++|.+++|++++++||+++++|..+
T Consensus 160 ~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~ 239 (366)
T COG1062 160 LEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE 239 (366)
T ss_pred ccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CCc-hHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 248 NNE-PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 248 ~~~-~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
. +..+.+.++|++++|.+|||+|....++++++++.++|+.
T Consensus 240 --~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~ 281 (366)
T COG1062 240 --VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTS 281 (366)
T ss_pred --hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeE
Confidence 4 6999999999999999999999999999999999998864
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-48 Score=338.33 Aligned_cols=257 Identities=27% Similarity=0.434 Sum_probs=232.3
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCC-CCCcEEEEEeEeeCChhhhhhhcccC------CCCcccCcceeEEEEEcCCCCC
Q 022819 11 ITCKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVT 83 (291)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~ 83 (291)
.+|+|+++.+++. +++++.|.|++ +|+||+|++.++|||++|+++|.... +.|+++|||.+|+|+++|+.|+
T Consensus 3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 4679999999986 99999999988 99999999999999999999997666 5799999999999999999999
Q ss_pred CCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECC
Q 022819 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (291)
Q Consensus 84 ~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip 163 (291)
++++||||++.|..+|+.|+.|++|.||.|+...|...+ +.+| ++++|++.++++++|+|
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atp--p~~G------------------~la~y~~~~~dfc~KLP 141 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATP--PVDG------------------TLAEYYVHPADFCYKLP 141 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccccCC--CcCC------------------ceEEEEEechHheeeCC
Confidence 999999999999999999999999999999999995443 3444 99999999999999999
Q ss_pred CCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEe
Q 022819 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (291)
Q Consensus 164 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i 243 (291)
++++++++|++. +++++|++ -++++++.|.+|||+|+|++|+.+...|+++|+.+|+.++..++|+++|+++|++.+.
T Consensus 142 d~vs~eeGAl~e-PLsV~~HA-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~ 219 (354)
T KOG0024|consen 142 DNVSFEEGALIE-PLSVGVHA-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTD 219 (354)
T ss_pred CCCchhhccccc-chhhhhhh-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEe
Confidence 999999999998 79999997 5899999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCC--chHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 244 NPNDNN--EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 244 ~~~~~~--~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+....+ +.+.+.++...+. .+|++|||+|....++.++..++.+|++
T Consensus 220 ~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~ 269 (354)
T KOG0024|consen 220 PSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTV 269 (354)
T ss_pred eccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEE
Confidence 654422 3444555554443 6999999999999999999999999974
No 5
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=8.4e-46 Score=342.83 Aligned_cols=289 Identities=80% Similarity=1.309 Sum_probs=244.9
Q ss_pred CccCCCCcceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccCCCCcccCcceeEEEEEcCCC
Q 022819 2 STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPG 81 (291)
Q Consensus 2 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~ 81 (291)
|.|+.+|+...|||+++.++++.++++++|.|.|+++||+|||.+++||++|+..+.+...+|.++|||++|+|+++|++
T Consensus 2 ~~~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~~~p~i~GhE~~G~V~~vG~~ 81 (378)
T PLN02827 2 SSSISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQALFPRIFGHEASGIVESIGEG 81 (378)
T ss_pred CccccCcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCCCCCeeecccceEEEEEcCCC
Confidence 45788888899999999998877999999999999999999999999999999998776557899999999999999999
Q ss_pred CCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEE
Q 022819 82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (291)
Q Consensus 82 ~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 161 (291)
+++|++||||++.+..+|+.|.+|.++.+++|+.......|.+..++..++...|..+.++...|+|++|+.++.+.+++
T Consensus 82 v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~ 161 (378)
T PLN02827 82 VTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
T ss_pred CcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEE
Confidence 99999999999999899999999999999999875432223221111111111111111122346999999999999999
Q ss_pred CCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCce
Q 022819 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (291)
Q Consensus 162 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~ 241 (291)
+|+++++++++.+.+.+.++|.++++..+++++++|||+|+|++|++++|+|+.+|+..|++++.+++++++++++|++.
T Consensus 162 iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~ 241 (378)
T PLN02827 162 VDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTD 241 (378)
T ss_pred CCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcE
Confidence 99999999999998888999988778888999999999999999999999999999967889988999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccC-ccc
Q 022819 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDV-RSI 290 (291)
Q Consensus 242 ~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~-G~i 290 (291)
++++++.+.++.+.+++++.+++|+|||++|....+..+++.++++ |++
T Consensus 242 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~i 291 (378)
T PLN02827 242 FINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLT 291 (378)
T ss_pred EEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEE
Confidence 9987642346777888887668999999999977899999999998 886
No 6
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.2e-46 Score=320.39 Aligned_cols=263 Identities=27% Similarity=0.414 Sum_probs=236.9
Q ss_pred cceeeeEEEEecCCC--CeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCC
Q 022819 9 QVITCKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVT 83 (291)
Q Consensus 9 ~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~ 83 (291)
.+.+.++|.+..++. +++++++++|+++++||+|+|+++|||.+|++.+.+.. .+|+++|||.+|+|+++|++|+
T Consensus 6 ~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~V~ 85 (360)
T KOG0023|consen 6 IPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSNVT 85 (360)
T ss_pred CchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCCcc
Confidence 567889999999988 46779999999999999999999999999999999888 7899999999999999999999
Q ss_pred CCCCCCEE-EeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEEC
Q 022819 84 EFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (291)
Q Consensus 84 ~~~~GdrV-~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 162 (291)
+|++|||| +-....+|..|++|.++++++|+...++.+|+. .||. -.+|+|++|++++..++++|
T Consensus 86 ~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~-~DGt-------------~~~ggf~~~~~v~~~~a~kI 151 (360)
T KOG0023|consen 86 GFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVY-HDGT-------------ITQGGFQEYAVVDEVFAIKI 151 (360)
T ss_pred cccccCeeeeeEEeccccCccccccCCcccCCceeEeccccc-cCCC-------------CccCccceeEEEeeeeEEEC
Confidence 99999999 666678999999999999999999999888877 5662 12468999999999999999
Q ss_pred CCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHHcCCce
Q 022819 163 SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTE 241 (291)
Q Consensus 163 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~-~~~~~a~~~g~~~ 241 (291)
|++++++.||-+.|+..|.|..| ...++.||+++-|.|+|++|.+++|+|+++|. +|+++++++ +|.+..+.||++.
T Consensus 152 P~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~ 229 (360)
T KOG0023|consen 152 PENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADV 229 (360)
T ss_pred CCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcce
Confidence 99999999999999999999975 77778899999999997799999999999999 999999987 6777788899999
Q ss_pred EeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 242 ~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+++..+ ++++.+.+...+++.+|.|.+. ....++.++.+|+.+|++
T Consensus 230 fv~~~~-d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~Gt~ 275 (360)
T KOG0023|consen 230 FVDSTE-DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVNGTL 275 (360)
T ss_pred eEEecC-CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcCCEE
Confidence 998873 3888899999888888888876 445689999999999986
No 7
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.3e-44 Score=335.22 Aligned_cols=287 Identities=55% Similarity=1.019 Sum_probs=240.7
Q ss_pred cCCCCcceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcC
Q 022819 4 SIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVG 79 (291)
Q Consensus 4 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG 79 (291)
|..++.+++|||+++.++++++.++++|.|.|+++||+|||++++||++|++.+.|.. .+|.++|||++|+|+++|
T Consensus 2 ~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG 81 (381)
T PLN02740 2 SETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVG 81 (381)
T ss_pred ccccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeC
Confidence 4556678899999999998889999999999999999999999999999999998764 458899999999999999
Q ss_pred CCCCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccc-cccCCcccceecc--CCccccccCccceeeEEEeec
Q 022819 80 PGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRG-VMHSDQQTRFSIK--GKPVYHYCAVSSFSEYTVVHS 156 (291)
Q Consensus 80 ~~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g-~~~~~g~~~~~~~--~~~~~~~~~~g~~~~~~~~~~ 156 (291)
+++..|++||||++.+..+|+.|.+|.+++++.|+......+. ....+|-.++... +....++...|+|+||+.++.
T Consensus 82 ~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~ 161 (381)
T PLN02740 82 EGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDS 161 (381)
T ss_pred CCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEeh
Confidence 9999999999999999999999999999999999886532110 0000110000000 000011122469999999999
Q ss_pred cceEECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 022819 157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (291)
Q Consensus 157 ~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~ 236 (291)
++++++|+++++++++.+++.+.|||+++++..+++++++|||+|+|++|++++|+|+.+|+++|++++++++|++.+++
T Consensus 162 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~ 241 (381)
T PLN02740 162 ACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE 241 (381)
T ss_pred HHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH
Confidence 99999999999999999999999999988888999999999999999999999999999999679999999999999999
Q ss_pred cCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccC-ccc
Q 022819 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDV-RSI 290 (291)
Q Consensus 237 ~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~-G~i 290 (291)
+|++.++++++.+.++.+.+++++.+++|++||++|.+..+..++.+++++ |++
T Consensus 242 ~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~ 296 (381)
T PLN02740 242 MGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLT 296 (381)
T ss_pred cCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEE
Confidence 999999987652235777888887668999999999988899999999986 875
No 8
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2.2e-44 Score=332.25 Aligned_cols=277 Identities=48% Similarity=0.886 Sum_probs=236.5
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
|||+++..++++++++++|.|+|.++||+|||.+++||++|++.+.|.. .+|.++|||++|+|+++|+++++|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 7899999988889999999999999999999999999999999988764 4589999999999999999999999999
Q ss_pred EEEeecccCCCCCccccCCCCCcccccccc-ccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCCh
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~ 168 (291)
||++.+..+|+.|.+|..+.++.|+..... .+|+. .+|..++..+|..++++.+.|+|++|+.++.++++++|+++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 999998899999999999999999875321 12221 2222222222222233333479999999999999999999999
Q ss_pred hhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 022819 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (291)
Q Consensus 169 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~ 248 (291)
++++.+++++.|||+++.+..+++++++|||+|+|++|++++|+|+.+|+.+|++++.++++++.++++|++.++++.+.
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~ 240 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY 240 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence 99999999999999998888899999999999999999999999999999779999999999999999999999987642
Q ss_pred CchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccC-ccc
Q 022819 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDV-RSI 290 (291)
Q Consensus 249 ~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~-G~i 290 (291)
..++.+.+++++.+++|++||++|++..+..++++++++ |++
T Consensus 241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~ 283 (368)
T TIGR02818 241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGES 283 (368)
T ss_pred chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeE
Confidence 345667788887778999999999878899999999886 875
No 9
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=6.4e-44 Score=329.17 Aligned_cols=278 Identities=52% Similarity=0.959 Sum_probs=238.7
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCC
Q 022819 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (291)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~G 88 (291)
+|||+++.+++++++++++|.|.|+++||+|||++++||++|+..+.|.+ .+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 68999999888889999999999999999999999999999999888754 568899999999999999999999999
Q ss_pred CEEEeecccCCCCCccccCCCCCcccccccc-ccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCC
Q 022819 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (291)
Q Consensus 89 drV~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~ 167 (291)
|||++.+..+|+.|.+|.+++++.|.+.... ..|.. .+|..++.++|...+++.+.|+|++|+.++.+.++++|++++
T Consensus 82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 9999999999999999999999999864321 12222 222222222333333333457999999999999999999999
Q ss_pred hhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCC
Q 022819 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (291)
Q Consensus 168 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~ 247 (291)
+++++.+++.+.++|+++.+..+++++++|||+|+|++|++++|+|+.+|+.+|+++++++++++.++++|++.++++++
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 99999999999999998888889999999999999999999999999999967999999999999999999999998865
Q ss_pred CCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccC-ccc
Q 022819 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDV-RSI 290 (291)
Q Consensus 248 ~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~-G~i 290 (291)
.++++.+.+++++.+++|+|||++|++..+..++++++++ |++
T Consensus 241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~ 284 (368)
T cd08300 241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTS 284 (368)
T ss_pred cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeE
Confidence 3236778888888779999999999877899999999886 875
No 10
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=7.7e-44 Score=328.64 Aligned_cols=280 Identities=63% Similarity=1.129 Sum_probs=238.2
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCC
Q 022819 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (291)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~ 87 (291)
++|||+++.+++++++++++|.|+|+++||+|||.+++||++|+..+.|.. .+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 478999999988889999999999999999999999999999999988864 45889999999999999999999999
Q ss_pred CCEEEeecccCCCCCccccCCCCCcccccccc-ccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 88 GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
||||++.+..+|+.|.+|..++++.|...... ..|.+..++..++...|...+++...|+|++|+.++..+++++|+++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 99999999999999999999999999886432 11222112212222222222223234689999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~ 246 (291)
++++++++++.+.|+|.++++..+++++++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++.+++++
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~ 240 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence 99999999999999999888888999999999999999999999999999987799999999999999999999998876
Q ss_pred CCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccC-ccc
Q 022819 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDV-RSI 290 (291)
Q Consensus 247 ~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~-G~i 290 (291)
+.++++.+.+++++.+++|++||++|....+..++++++++ |++
T Consensus 241 ~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~ 285 (369)
T cd08301 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVT 285 (369)
T ss_pred ccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEE
Confidence 43345677788877668999999999877889999999996 875
No 11
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=7.1e-44 Score=329.18 Aligned_cols=275 Identities=36% Similarity=0.650 Sum_probs=233.8
Q ss_pred eeEEEEecCC--------CCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCC
Q 022819 13 CKAAVAWGAG--------QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGV 82 (291)
Q Consensus 13 ~~a~~~~~~~--------~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~ 82 (291)
|||+++.+++ +.++++++|.|.|+++||+|||.+++||++|++.+.|.. .+|.++|||++|+|+++|+++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~v 80 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPLPMALGHEAAGVVVEVGEGV 80 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCCCCCccCCccceeEEEEeCCCC
Confidence 6899999865 348999999999999999999999999999999998865 568899999999999999999
Q ss_pred CCCCCCCEEEeecccCCCCCccccCCCCCcccccccc-ccccccCCcccceeccCCccccccCccceeeEEEeeccceEE
Q 022819 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (291)
Q Consensus 83 ~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 161 (291)
++|++||||++.+..+|+.|..|..++++.|...... ..|.. .+|...+..++..+.+..+.|+|++|+.++.+++++
T Consensus 81 ~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~ 159 (371)
T cd08281 81 TDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVK 159 (371)
T ss_pred CcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceEE
Confidence 9999999999888889999999999999999875321 11211 111111111111111112236999999999999999
Q ss_pred CCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCce
Q 022819 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (291)
Q Consensus 162 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~ 241 (291)
+|+++++++|+.+++.+.|||.++.+..+++++++|||+|+|++|++++|+|+.+|+++|++++.+++|+++++++|++.
T Consensus 160 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~ 239 (371)
T cd08281 160 IDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATA 239 (371)
T ss_pred CCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCce
Confidence 99999999999999899999998888889999999999999999999999999999967999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 242 ~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++++++ .++.+.+++++.+++|++||++|.+..+..++++++++|++
T Consensus 240 ~i~~~~--~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~i 286 (371)
T cd08281 240 TVNAGD--PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTT 286 (371)
T ss_pred EeCCCc--hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEE
Confidence 998865 67888888887768999999999878899999999999986
No 12
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.5e-43 Score=325.54 Aligned_cols=269 Identities=32% Similarity=0.532 Sum_probs=233.8
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
+|||+++.+++++++++++|.|.|+++||+|||.++++|++|++.+.|.. .+|.++|||++|+|+++|+++.+|++||
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 80 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGINDEFPFLLGHEAAGVVEAVGEGVTDVAPGD 80 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccccCCcccccceEEEEEEeCCCCcccCCCC
Confidence 58999999999889999999999999999999999999999999988854 5688999999999999999999999999
Q ss_pred EEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChh
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~ 169 (291)
||++.+..+|+.|..|.++++++|.............+| .........|+|+||+.++.++++++|++++++
T Consensus 81 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g--------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~ 152 (358)
T TIGR03451 81 YVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDG--------TELSPALGIGAFAEKTLVHAGQCTKVDPAADPA 152 (358)
T ss_pred EEEEccCCCCCCChHHhCcCcccCcCccccccccccccC--------cccccccccccccceEEEehhheEECCCCCChh
Confidence 999999999999999999999999854321110000011 000000113699999999999999999999999
Q ss_pred hhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCC
Q 022819 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (291)
Q Consensus 170 ~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~ 249 (291)
+|+.+++.+.++|.++.+..+++++++|||+|+|++|++++|+|+.+|+++|+++++++++++.++++|++.++++++
T Consensus 153 ~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~-- 230 (358)
T TIGR03451 153 AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG-- 230 (358)
T ss_pred HhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC--
Confidence 999999999999988888889999999999999999999999999999966999999999999999999999998865
Q ss_pred chHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 250 ~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.++.+.+++.+++ ++|++||++|++..+..++++++++|++
T Consensus 231 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~i 272 (358)
T TIGR03451 231 TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTV 272 (358)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEE
Confidence 6777888888877 8999999999877899999999999986
No 13
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=5.6e-43 Score=322.56 Aligned_cols=279 Identities=53% Similarity=0.965 Sum_probs=239.1
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCCC
Q 022819 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEG 88 (291)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~G 88 (291)
++|||+++.+.+++++++++|.|.++++||+|||+++++|++|++.+.|.. .+|.++|||++|+|+++|+++..|++|
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 80 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATLFPVILGHEGAGIVESVGEGVTNLKPG 80 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCCCCCCeecccceeEEEEeeCCCCccCCCC
Confidence 467999999888889999999999999999999999999999999988765 567899999999999999999999999
Q ss_pred CEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCCh
Q 022819 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (291)
Q Consensus 89 drV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~ 168 (291)
|||++.+..+|+.|.+|.++.++.|+.......|.. .++..++...+...+++...|+|++|+.++.+.++++|+++++
T Consensus 81 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~ 159 (365)
T cd08277 81 DKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPL 159 (365)
T ss_pred CEEEECCCCCCCCCchhcCcCcccCcCccccccccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCCCH
Confidence 999999899999999999999999998765444543 2222222222222222333479999999999999999999999
Q ss_pred hhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 022819 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (291)
Q Consensus 169 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~ 248 (291)
++++.+++++.|||+++.+..+++++++|+|+|+|++|++++|+|+.+|+.+|+++++++++++.++++|++.++++++.
T Consensus 160 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~ 239 (365)
T cd08277 160 EHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDS 239 (365)
T ss_pred HHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccc
Confidence 99999999999999988888899999999999999999999999999999779999999999999999999999887642
Q ss_pred CchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccC-ccc
Q 022819 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDV-RSI 290 (291)
Q Consensus 249 ~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~-G~i 290 (291)
..++.+.+++++.+++|++||++|....+..++++++++ |++
T Consensus 240 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~ 282 (365)
T cd08277 240 DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVS 282 (365)
T ss_pred cchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEE
Confidence 334567777777678999999999878889999999885 775
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=2.3e-42 Score=315.08 Aligned_cols=253 Identities=32% Similarity=0.507 Sum_probs=225.4
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEG 88 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~~G 88 (291)
|||+++.+++. ++++++|.|.|+++||+||+.++++|++|++.+.+.+ .+|.++|||++|+|+++|+++++|++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 68999998764 9999999999999999999999999999999876653 257899999999999999999999999
Q ss_pred CEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCCh
Q 022819 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (291)
Q Consensus 89 drV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~ 168 (291)
|||++.+..+|+.|..|.+++++.|..... .+|.. .+ |+|++|+.++.++++++|+++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~-~~g~~-~~------------------G~~ae~~~v~~~~~~~~P~~~~~ 139 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA-AYGWN-RD------------------GGHAEYMLVPEKTLIPLPDDLSF 139 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc-ccccC-CC------------------CcceeEEEechHHeEECCCCCCH
Confidence 999999999999999999999999986543 23322 22 49999999999999999999999
Q ss_pred hhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 022819 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (291)
Q Consensus 169 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~ 248 (291)
++|+.+++++.|||+++ +...+.++++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|++.++++++
T Consensus 140 ~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~- 217 (339)
T cd08239 140 ADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ- 217 (339)
T ss_pred HHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc-
Confidence 99999999999999986 5677889999999999999999999999999954999999999999999999999998865
Q ss_pred CchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 249 ~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.+ .+.+.+++.+ ++|++||++|++..+..++++++++|++
T Consensus 218 -~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~ 258 (339)
T cd08239 218 -DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRL 258 (339)
T ss_pred -ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEE
Confidence 44 6677777777 8999999999987788999999999986
No 15
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=2e-42 Score=313.23 Aligned_cols=229 Identities=29% Similarity=0.411 Sum_probs=209.0
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
|+++++.+.+.| ++++|+|.|.|+++||||||.+++||+.|...++|.. .+|.++|.|++|+|+++|+++++|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 689999988776 8899999999999999999999999999999999853 4899999999999999999999999
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||||+... ..| . .|+|+||..++.+.++++|+++
T Consensus 81 ~GdrV~~~~-~~~--------------------------~------------------~G~~AEy~~v~a~~~~~~P~~l 115 (326)
T COG0604 81 VGDRVAALG-GVG--------------------------R------------------DGGYAEYVVVPADWLVPLPDGL 115 (326)
T ss_pred CCCEEEEcc-CCC--------------------------C------------------CCcceeEEEecHHHceeCCCCC
Confidence 999997763 100 1 1499999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~ 245 (291)
++++||++++.++|||+++.+..+++++++|||+|+ |++|.+++|+|+++|+ +++++.+++++.++++++|+++++++
T Consensus 116 s~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y 194 (326)
T COG0604 116 SFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINY 194 (326)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcC
Confidence 999999999999999999999999999999999975 9999999999999998 67777778888889999999999999
Q ss_pred CCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++ .++.+.+++++++ ++|+|||++|+ +.+..+++.|+++|++
T Consensus 195 ~~--~~~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~G~l 237 (326)
T COG0604 195 RE--EDFVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPGGRL 237 (326)
T ss_pred Cc--ccHHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccCCEE
Confidence 86 7799999999999 99999999999 6788899999999986
No 16
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.7e-41 Score=310.15 Aligned_cols=255 Identities=22% Similarity=0.369 Sum_probs=213.3
Q ss_pred ceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhc-ccC-----CCCcccCcceeEEEEEcCCCCC
Q 022819 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-TQA-----IFPRIFGHEASGIVESVGPGVT 83 (291)
Q Consensus 10 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~-g~~-----~~p~~~G~e~~G~V~~vG~~~~ 83 (291)
...+++++++++++ ++++++|.| +.++||||||.+++||++|++.+. |.. .+|.++|||++|+|+++ +++
T Consensus 2 ~~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~ 77 (343)
T PRK09880 2 QVKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSS 77 (343)
T ss_pred cccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCc
Confidence 35679999998877 999999987 689999999999999999999875 321 46899999999999999 678
Q ss_pred CCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECC
Q 022819 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (291)
Q Consensus 84 ~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip 163 (291)
+|++||||++.+..+|+.|.+|.++++++|+...+ +|.... .....|+|+||+.++.+.++++|
T Consensus 78 ~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~--~g~~~~--------------~~~~~G~~aey~~v~~~~~~~~P 141 (343)
T PRK09880 78 GLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF--FGSAMY--------------FPHVDGGFTRYKVVDTAQCIPYP 141 (343)
T ss_pred cCCCCCEEEECCCCCCcCChhhcCCChhhCCCcce--eecccc--------------cCCCCCceeeeEEechHHeEECC
Confidence 89999999999999999999999999999988654 221100 00012599999999999999999
Q ss_pred CCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEe
Q 022819 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (291)
Q Consensus 164 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i 243 (291)
+++++++++.. .++.++|+++. .....++++|+|+|+|++|++++|+|+.+|+++|++++++++++++++++|++.++
T Consensus 142 ~~l~~~~aa~~-~~~~~a~~al~-~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi 219 (343)
T PRK09880 142 EKADEKVMAFA-EPLAVAIHAAH-QAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV 219 (343)
T ss_pred CCCCHHHHHhh-cHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEe
Confidence 99998876644 47789999864 44556899999999999999999999999997799999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++++ .++.+.. +. .+++|+|||++|.+..+..++++++++|++
T Consensus 220 ~~~~--~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~i 262 (343)
T PRK09880 220 NPQN--DDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVM 262 (343)
T ss_pred cCCc--ccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEE
Confidence 8865 4443322 21 236999999999977899999999999986
No 17
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.9e-41 Score=314.91 Aligned_cols=260 Identities=25% Similarity=0.389 Sum_probs=216.8
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCC-------CCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCC
Q 022819 12 TCKAAVAWGAGQPLVVEEVEVNPPQ-------PEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGV 82 (291)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~~~~~-------~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~ 82 (291)
.|||+++.++++ ++++++|.|.|+ ++||||||++++||++|++.+.|.. .+|.++|||++|+|+++|+++
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~V 80 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTAPTGLVLGHEITGEVIEKGRDV 80 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCCCCCccccceeEEEEEEEcCcc
Confidence 479999998886 999999999874 6899999999999999999998864 568999999999999999999
Q ss_pred CCCCCCCEEEeecccCCCCCccccCCCCCcccccccc----ccccccCCcccceeccCCccccccCccceeeEEEeecc-
Q 022819 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE----RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG- 157 (291)
Q Consensus 83 ~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~----~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~- 157 (291)
.+|++||||++.+..+|+.|.+|++++++.|+..... .+|+... | ...|+|+||+.++..
T Consensus 81 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~-~--------------~~~G~~aey~~v~~~~ 145 (393)
T TIGR02819 81 EFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM-G--------------GWVGGQSEYVMVPYAD 145 (393)
T ss_pred ccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccccc-C--------------CCCCceEEEEEechhh
Confidence 9999999999999999999999999999999974321 1121100 0 002599999999964
Q ss_pred -ceEECCCCCCh----hhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 022819 158 -CAVKVSSIAPL----EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232 (291)
Q Consensus 158 -~~~~ip~~~~~----~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~ 232 (291)
+++++|++++. ..++.+...+.++|+++ +..+++++++|||.|+|++|++++|+|+.+|++.+++++.+++|++
T Consensus 146 ~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~ 224 (393)
T TIGR02819 146 FNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLA 224 (393)
T ss_pred CceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 79999998753 34667777888999976 4578999999999989999999999999999966777778889999
Q ss_pred HHHHcCCceEeCCCCCCchHHHHHHHHhcC-CccEEEEccCCh--------------HHHHHHHHhhccCccc
Q 022819 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT--------------GMITTALQSCCDVRSI 290 (291)
Q Consensus 233 ~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~--------------~~~~~~~~~l~~~G~i 290 (291)
+++++|++. +++.. ..++.+.+.+++.+ ++|++||++|.+ ..+++++++++++|++
T Consensus 225 ~a~~~Ga~~-v~~~~-~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i 295 (393)
T TIGR02819 225 QARSFGCET-VDLSK-DATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAI 295 (393)
T ss_pred HHHHcCCeE-EecCC-cccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEE
Confidence 999999974 44432 14566778888776 899999999985 4799999999999986
No 18
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.8e-41 Score=310.39 Aligned_cols=258 Identities=30% Similarity=0.428 Sum_probs=211.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCc-ccCcceeEEEEEcCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR-IFGHEASGIVESVGPGVTEFNEG 88 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~-~~G~e~~G~V~~vG~~~~~~~~G 88 (291)
|++++++.+....++++.+.|.+.++||+|||.++|||++|++.+.+.. ..|. ++|||++|+|+++| .+..|++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 5677888776544477777777899999999999999999999999865 3344 89999999999999 77789999
Q ss_pred CEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEE-CCCCCC
Q 022819 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK-VSSIAP 167 (291)
Q Consensus 89 drV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-ip~~~~ 167 (291)
|||++.+..+|+.|.+|+.+.++.|++..+ .|+....+ +-.|+|+||+.+|.++.+. +|++++
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~--~g~~~~~~--------------~~~G~~aEyv~vp~~~~~~~~pd~~~ 143 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGF--YGYAGLGG--------------GIDGGFAEYVRVPADFNLAKLPDGID 143 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccc--cccccccC--------------CCCCceEEEEEeccccCeecCCCCCC
Confidence 999999999999999999999999995543 22110000 0114999999999765555 578874
Q ss_pred hhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCceEeCCC
Q 022819 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPN 246 (291)
Q Consensus 168 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~g~~~~i~~~ 246 (291)
.+++++.-++.+++++........++.+|+|+|+|++|++++++++.+|+.+||+++.+++|++++++ .|++.+++..
T Consensus 144 -~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~ 222 (350)
T COG1063 144 -EEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPS 222 (350)
T ss_pred -hhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCc
Confidence 55555555999998874555555666699999999999999999999999999999999999999999 5666566554
Q ss_pred CCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 247 ~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
. ++....+.+.+.+ ++|++|||+|.+..+++++++++++|++
T Consensus 223 ~--~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v 265 (350)
T COG1063 223 E--DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTV 265 (350)
T ss_pred c--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEE
Confidence 3 3677788888988 9999999999988999999999999986
No 19
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=2.6e-40 Score=304.32 Aligned_cols=269 Identities=21% Similarity=0.324 Sum_probs=222.4
Q ss_pred CCccCCCCcceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEE
Q 022819 1 MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVES 77 (291)
Q Consensus 1 m~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~ 77 (291)
|-+|....-+++++++...+..+++++.+++.|.|+++||+|||.+++||++|++.+.|.. .+|.++|||++|+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~ 80 (360)
T PLN02586 1 MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTK 80 (360)
T ss_pred CCCChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEE
Confidence 5555544466888899988877779999999999999999999999999999999987754 4588999999999999
Q ss_pred cCCCCCCCCCCCEEEeecc-cCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeec
Q 022819 78 VGPGVTEFNEGEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS 156 (291)
Q Consensus 78 vG~~~~~~~~GdrV~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 156 (291)
+|+++++|++||||++.+. .+|+.|.+|.++++++|+...+...+.. .+|. ...|+|++|+.++.
T Consensus 81 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~-~~g~-------------~~~G~~aey~~v~~ 146 (360)
T PLN02586 81 LGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIG-HDGT-------------KNYGGYSDMIVVDQ 146 (360)
T ss_pred ECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccc-cCCC-------------cCCCccceEEEEch
Confidence 9999999999999986544 5799999999999999997643211000 0010 00249999999999
Q ss_pred cceEECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHH
Q 022819 157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAK 235 (291)
Q Consensus 157 ~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~-~~~a~ 235 (291)
+.++++|+++++++++.+++.+.|+|+++.+...++++++|+|.|+|++|++++|+|+.+|+ ++++++.++++ .+.++
T Consensus 147 ~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~ 225 (360)
T PLN02586 147 HFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAIN 225 (360)
T ss_pred HHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHH
Confidence 99999999999999999999999999987666777899999999999999999999999999 77777666655 45668
Q ss_pred HcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 236 AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 236 ~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++|++.++++.+ . +.+++.++ ++|+|||++|.+..++.++++++++|++
T Consensus 226 ~~Ga~~vi~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~i 274 (360)
T PLN02586 226 RLGADSFLVSTD--P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKL 274 (360)
T ss_pred hCCCcEEEcCCC--H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEE
Confidence 899999887653 2 24445443 6999999999877899999999999986
No 20
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=3e-39 Score=298.61 Aligned_cols=280 Identities=49% Similarity=0.863 Sum_probs=234.8
Q ss_pred ceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCC
Q 022819 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNE 87 (291)
Q Consensus 10 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~ 87 (291)
..+|++.++..++++++++++|.|.+.++||+||++++++|++|.+.+.|.. .+|.++|||++|+|+++|+++..|++
T Consensus 5 ~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~ 84 (373)
T cd08299 5 VIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVTPFPVILGHEAAGIVESVGEGVTTVKP 84 (373)
T ss_pred cceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCCCCCCccccccceEEEEEeCCCCccCCC
Confidence 4568999999988889999999999999999999999999999999988864 46789999999999999999999999
Q ss_pred CCEEEeecccCCCCCccccCCCCCccccccccc-cccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 88 GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
||+|++.+..+|+.|.+|.+++++.|+...... .|.+ .++..+..++|....+++..|+|++|+.++.+.++++|+++
T Consensus 85 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l 163 (373)
T cd08299 85 GDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA 163 (373)
T ss_pred CCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence 999999998999999999999999998754311 1221 12222222333222333345799999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~ 246 (291)
++++++++.+++.+||+++.+..+++++++|+|+|+|++|++++++|+.+|+.+|+++++++++++.++++|++.+++..
T Consensus 164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~ 243 (373)
T cd08299 164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQ 243 (373)
T ss_pred ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccc
Confidence 99999999999999999888889999999999999899999999999999986799999999999999999999888876
Q ss_pred CCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhh-ccCccc
Q 022819 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC-CDVRSI 290 (291)
Q Consensus 247 ~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l-~~~G~i 290 (291)
+.+.++.+.+.+++.+++|+++|++|++..+..++..+ +++|++
T Consensus 244 ~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~ 288 (373)
T cd08299 244 DYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVS 288 (373)
T ss_pred ccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEE
Confidence 42334667777776668999999999877788877766 457764
No 21
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.4e-39 Score=298.19 Aligned_cols=251 Identities=28% Similarity=0.469 Sum_probs=220.2
Q ss_pred EEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhccc-C---CCCcccCcceeEEEEEcCCCCCCCCCCCEE
Q 022819 16 AVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ-A---IFPRIFGHEASGIVESVGPGVTEFNEGEHV 91 (291)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~-~---~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV 91 (291)
+++.+++++++++++|.|.|+++||+|||.++++|++|++.+.+. . .+|.++|||++|+|+++|+++..+ +||||
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 567788877999999999999999999999999999999886332 2 468899999999999999999887 99999
Q ss_pred EeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCC------C
Q 022819 92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS------I 165 (291)
Q Consensus 92 ~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~------~ 165 (291)
++.+..+|+.|..|..++++.|....+ .|.. .+ |+|++|+.++.++++++|+ +
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~--~g~~-~~------------------G~~ae~~~v~~~~~~~ip~~~~~~~~ 139 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKM--PGND-MQ------------------GGFASHIVVPAKGLCVVDEARLAAAG 139 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCc--cCcC-CC------------------CcccceEEechHHeEECCcccccccC
Confidence 999999999999999999999987543 2321 12 4999999999999999999 8
Q ss_pred CChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCC
Q 022819 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 166 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~ 245 (291)
+++++++.+.+.+.++|+++. ..+++++++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.++++|++.++++
T Consensus 140 ~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~ 217 (349)
T TIGR03201 140 LPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNP 217 (349)
T ss_pred CCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecC
Confidence 999999999889999999864 5788999999999999999999999999999 89999999999999999999998887
Q ss_pred CCCC-chHHHHHHHHhcC-Ccc----EEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNN-EPVQQVIKRITDG-GAD----YSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~-~~~~~~~~~~~~g-~~d----~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.+.+ .++.+.+++++++ ++| ++|||+|+...+..++++++++|++
T Consensus 218 ~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~i 268 (349)
T TIGR03201 218 KDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTL 268 (349)
T ss_pred ccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeE
Confidence 5421 3577778888877 776 8999999988888999999999986
No 22
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=1.1e-39 Score=299.60 Aligned_cols=250 Identities=22% Similarity=0.297 Sum_probs=204.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC------CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
|||+++..++.+++++++|.|+|+++||||||++++||++|++.+.|.+ .+|.++|||++|+|+++|++ ++|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 5789988654449999999999999999999999999999999998864 24689999999999999999 9999
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||||+..+..+|+.|..|..+++++|....+...|....+ |+|++|+.++.+.++++|+++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~------------------G~~aey~~~~~~~~~~~P~~~ 141 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLH------------------GFMREYFVDDPEYLVKVPPSL 141 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCC------------------ccceeEEEeccccEEECCCCC
Confidence 99999999888999999999999999987654333321112 499999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHh------hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHHHHc
Q 022819 167 PLEKICLLSCGLSAGLGAAWN------VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT---NPEKCEKAKAF 237 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~------~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~---~~~~~~~a~~~ 237 (291)
+ +. +++..++.+++.++.. ..+.+++++|+|+|+|++|++++|+|+.+|+ +|+++++ +++|+++++++
T Consensus 142 ~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~ 218 (355)
T cd08230 142 A-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEEL 218 (355)
T ss_pred C-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHc
Confidence 8 43 4444455555443322 2235789999999999999999999999999 8999887 68899999999
Q ss_pred CCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 238 g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
|++. +++.+ +++.+ .+ ..+++|+|||++|.+..+..+++.++++|++
T Consensus 219 Ga~~-v~~~~--~~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~ 265 (355)
T cd08230 219 GATY-VNSSK--TPVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVV 265 (355)
T ss_pred CCEE-ecCCc--cchhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEE
Confidence 9986 56543 33333 21 1248999999999877899999999999986
No 23
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=8e-39 Score=294.90 Aligned_cols=277 Identities=48% Similarity=0.859 Sum_probs=245.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCCCCE
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~Gdr 90 (291)
++|+++.+.+++++++++|.|.+++++|+||+.++++|++|++.+.+.. ..|.++|||++|+|+++|+++..+++||+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPTPLPVILGHEGAGIVESIGPGVTTLKPGDK 80 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCCCE
Confidence 4788999888779999999999999999999999999999999887765 45679999999999999999999999999
Q ss_pred EEeecccCCCCCccccCCCCCcccccccc-ccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChh
Q 022819 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (291)
Q Consensus 91 V~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~ 169 (291)
|++.+..+|+.|.+|..+.+++|...... .+|.. .+|..++..||...+++.+.|+|++|+.++.+.++++|++++++
T Consensus 81 Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~ 159 (365)
T cd05279 81 VIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLE 159 (365)
T ss_pred EEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHH
Confidence 99998899999999999999999876543 33444 56777777888877787777899999999999999999999999
Q ss_pred hhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCC
Q 022819 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (291)
Q Consensus 170 ~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~ 249 (291)
+++.+.+.+.+||+++.+..+++++++|||+|+|++|++++++|+.+|+..++++++++++.+.++++|++.+++..+.+
T Consensus 160 ~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 239 (365)
T cd05279 160 KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQD 239 (365)
T ss_pred HhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccccc
Confidence 99999999999999888889999999999998899999999999999996688888899999999999999888876522
Q ss_pred chHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhc-cCccc
Q 022819 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC-DVRSI 290 (291)
Q Consensus 250 ~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~-~~G~i 290 (291)
.++.+.+.+++++++|++||++|....+..++++++ ++|++
T Consensus 240 ~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~ 281 (365)
T cd05279 240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTS 281 (365)
T ss_pred chHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEE
Confidence 267777888775589999999997788999999999 88875
No 24
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=4.6e-39 Score=294.34 Aligned_cols=251 Identities=28% Similarity=0.429 Sum_probs=216.6
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCcEEEEEeEeeCChhhhhhhc--ccCCCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWE--TQAIFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~--g~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
|||+++.+++. +++++.|.|.| +++||+|||.++++|++|...+. +...+|.++|||++|+|+++|+++++|++||
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGd 79 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGAHYYPITLGHEFSGYVEAVGSGVDDLHPGD 79 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 68999998875 99999999998 59999999999999999987532 2125688999999999999999999999999
Q ss_pred EEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChh
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~ 169 (291)
||++.+..+|+.|..|..+.++.|....+ .|.. .+ |+|++|+.++.+.++++|++++++
T Consensus 80 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~-~~------------------G~~aey~~v~~~~~~~lP~~~s~~ 138 (347)
T PRK10309 80 AVACVPLLPCFTCPECLRGFYSLCAKYDF--IGSR-RD------------------GGNAEYIVVKRKNLFALPTDMPIE 138 (347)
T ss_pred EEEECCCcCCCCCcchhCcCcccCCCcce--eccC-CC------------------CccceeEEeehHHeEECcCCCCHH
Confidence 99999999999999999999999976543 2221 12 499999999999999999999999
Q ss_pred hhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCC
Q 022819 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (291)
Q Consensus 170 ~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~ 249 (291)
+++++. .+.+++++ .+...++++++|+|+|+|++|++++|+|+.+|++.|+++++++++++.++++|++.++++++
T Consensus 139 ~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~-- 214 (347)
T PRK10309 139 DGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE-- 214 (347)
T ss_pred Hhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc--
Confidence 999874 45567776 46678899999999999999999999999999966899999999999999999999998764
Q ss_pred chHHHHHHHHhcC-Ccc-EEEEccCChHHHHHHHHhhccCccc
Q 022819 250 EPVQQVIKRITDG-GAD-YSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 250 ~~~~~~~~~~~~g-~~d-~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.+ .+.+.+++.+ ++| ++|||+|+...+..++++++++|++
T Consensus 215 ~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~i 256 (347)
T PRK10309 215 MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQL 256 (347)
T ss_pred cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEE
Confidence 33 4556777666 888 9999999988899999999999986
No 25
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=8.4e-39 Score=295.63 Aligned_cols=256 Identities=21% Similarity=0.298 Sum_probs=210.8
Q ss_pred eEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCCCE
Q 022819 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (291)
Q Consensus 14 ~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~Gdr 90 (291)
-+++..+..+++.+.+++.|.|+++||+|||.+++||++|++.+.|.+ .+|.++|||++|+|+++|+++.+|++|||
T Consensus 8 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdr 87 (375)
T PLN02178 8 FGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDR 87 (375)
T ss_pred EEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCE
Confidence 355555655568888999999999999999999999999999988764 45889999999999999999999999999
Q ss_pred EEeeccc-CCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChh
Q 022819 91 VLTVFIG-ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (291)
Q Consensus 91 V~~~~~~-~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~ 169 (291)
|++.+.. +|+.|.+|.+++++.|+...+...+.. ..| ....|+|++|+.++.+.++++|++++++
T Consensus 88 V~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~lP~~ls~~ 153 (375)
T PLN02178 88 VGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRS-SDG-------------TRNQGGYSDVIVVDHRFVLSIPDGLPSD 153 (375)
T ss_pred EEEcCccCCCCCChhHhCcchhcCCCccccccccc-cCC-------------CcCCCccccEEEEchHHeEECCCCCCHH
Confidence 9866554 699999999999999998643111000 000 0012599999999999999999999999
Q ss_pred hhhhhhhhhhhhHhHHHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHHcCCceEeCCCC
Q 022819 170 KICLLSCGLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPND 247 (291)
Q Consensus 170 ~aa~~~~~~~ta~~~l~~~~~-~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~-~~~~a~~~g~~~~i~~~~ 247 (291)
+++.+.+...|+|+++..... .+++++|+|.|+|++|++++|+|+.+|+ +|++++.+++ +.+.++++|++.++++.+
T Consensus 154 ~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~ 232 (375)
T PLN02178 154 SGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD 232 (375)
T ss_pred HcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC
Confidence 999999999999988655433 3689999999999999999999999999 7888877654 478889999999988653
Q ss_pred CCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 248 ~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
. +.+.+.+. ++|++||++|.+..+..++++++++|++
T Consensus 233 --~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~i 269 (375)
T PLN02178 233 --S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKL 269 (375)
T ss_pred --H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEE
Confidence 2 34555543 7999999999877889999999999986
No 26
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=2e-38 Score=290.48 Aligned_cols=253 Identities=33% Similarity=0.535 Sum_probs=223.6
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--------------CCCcccCcceeEEEEEc
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--------------IFPRIFGHEASGIVESV 78 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--------------~~p~~~G~e~~G~V~~v 78 (291)
|||+++.++++ ++++++|.|.|+++||+||+.++++|++|+..+.+.. .+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 68999998765 9999999999999999999999999999987654321 26889999999999999
Q ss_pred CCCCCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccc
Q 022819 79 GPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC 158 (291)
Q Consensus 79 G~~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 158 (291)
|+++++|++||+|+..+..+|++|.+|..+++++|+...+ .|+...+ |+|++|+.++.+.
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------------------g~~a~~~~~~~~~ 139 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF--IGLGGGG------------------GGFAEYVVVPAYH 139 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce--eccCCCC------------------CceeeEEEechHH
Confidence 9999999999999999999999999999999999987653 2221012 4999999999999
Q ss_pred eEECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC
Q 022819 159 AVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (291)
Q Consensus 159 ~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g 238 (291)
++++|+++++++++.+ ..+.+||.++ ...+++++++|+|+|+|++|.+++|+|+.+|+.+|+++++++++.++++++|
T Consensus 140 ~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~g 217 (351)
T cd08233 140 VHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELG 217 (351)
T ss_pred eEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC
Confidence 9999999999999876 4778999987 7888999999999999999999999999999978999999999999999999
Q ss_pred CceEeCCCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 239 VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 239 ~~~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++.++++++ .++.+.+++++.+ ++|++||++|.+..+..++++++++|++
T Consensus 218 a~~~i~~~~--~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~ 268 (351)
T cd08233 218 ATIVLDPTE--VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTA 268 (351)
T ss_pred CCEEECCCc--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEE
Confidence 999998876 6788888888877 7999999999877899999999999986
No 27
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2.1e-38 Score=288.31 Aligned_cols=242 Identities=24% Similarity=0.331 Sum_probs=211.1
Q ss_pred EEEEecCCC----CeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCC
Q 022819 15 AAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (291)
Q Consensus 15 a~~~~~~~~----~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~ 87 (291)
|+++.+++. +++++++|.|.|+++||+|||++++||++|.+.+.|.+ .+|.++|||++|+|+++|+++.+|++
T Consensus 1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAV 80 (329)
T ss_pred CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCC
Confidence 355666653 48999999999999999999999999999999998865 24689999999999999999999999
Q ss_pred CCEEEeecc-cCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 88 GEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 88 GdrV~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
||||++.+. .+|+.|.+|..++++.|+...+ .|.. .+ |+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~-~~------------------G~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRY--TGWD-TD------------------GGYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CCEEEEcCccCcCCCChHHhCcCcccCCCccc--CCcc-cC------------------CcceeEEEeccccEEECCCCC
Confidence 999987664 4799999999999999988654 3322 22 499999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~ 246 (291)
++++++.+++.+.|||+++ ...+++++++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++.+++..
T Consensus 140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 9999999999999999987 46889999999999999999999999999999 899999999999999999999998753
Q ss_pred CCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 247 ~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+ .. ..++|+++++.+....+..++++++++|++
T Consensus 218 ~--~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~ 250 (329)
T TIGR02822 218 D--TP---------PEPLDAAILFAPAGGLVPPALEALDRGGVL 250 (329)
T ss_pred c--cC---------cccceEEEECCCcHHHHHHHHHhhCCCcEE
Confidence 2 11 126899999888778899999999999986
No 28
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=9.3e-38 Score=287.05 Aligned_cols=259 Identities=24% Similarity=0.312 Sum_probs=216.6
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCC
Q 022819 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (291)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~ 87 (291)
++++|++++.+++++++++++.|+|+++||+|||.+++||++|+..+.|.+ .+|.++|||++|+|+++|+++++|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~ 87 (357)
T PLN02514 8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV 87 (357)
T ss_pred ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccC
Confidence 568999999999999999999999999999999999999999999888764 45889999999999999999999999
Q ss_pred CCEEEeecc-cCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 88 GEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 88 GdrV~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
||+|++.+. ..|+.|..|.++.++.|....+...+.. ..| ....|+|++|+.++.+.++++|+++
T Consensus 88 Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~iP~~~ 153 (357)
T PLN02514 88 GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY-TDG-------------KPTQGGFASAMVVDQKFVVKIPEGM 153 (357)
T ss_pred CCEEEEcCccccCCCChhHhCCCcccCCCccccccccc-cCC-------------ccCCCccccEEEEchHHeEECCCCC
Confidence 999986554 4699999999999999987643111000 000 0012599999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCceEeCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNP 245 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~~~~i~~ 245 (291)
++++++.+++.+.|||+++.+....+++++++|+|+|++|++++|+|+.+|+ ++++++.++++++.+ +++|++.+++.
T Consensus 154 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~ 232 (357)
T PLN02514 154 APEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVS 232 (357)
T ss_pred CHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecC
Confidence 9999999999999999987666667899999999999999999999999999 788787777766544 67999888775
Q ss_pred CCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.+ . ..+.+.+. ++|++||++|....++.++++++++|++
T Consensus 233 ~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~i 271 (357)
T PLN02514 233 SD--A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKL 271 (357)
T ss_pred CC--h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCCEE
Confidence 43 2 23444443 6999999999877899999999999986
No 29
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=3e-38 Score=265.16 Aligned_cols=230 Identities=27% Similarity=0.321 Sum_probs=213.4
Q ss_pred cceeeeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCC
Q 022819 9 QVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVT 83 (291)
Q Consensus 9 ~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~ 83 (291)
.+...+.+++++.|.+ +++++.|+|+|+++|++||-.++|+|+.|.-+..|-+ +.|+++|-|++|+|+++|++++
T Consensus 5 ~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvt 84 (336)
T KOG1197|consen 5 SPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVT 84 (336)
T ss_pred CCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCcc
Confidence 3455688888887765 8999999999999999999999999999999999988 6789999999999999999999
Q ss_pred CCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECC
Q 022819 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (291)
Q Consensus 84 ~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip 163 (291)
++++||||+.... .|.|+++..+|...++++|
T Consensus 85 drkvGDrVayl~~------------------------------------------------~g~yaee~~vP~~kv~~vp 116 (336)
T KOG1197|consen 85 DRKVGDRVAYLNP------------------------------------------------FGAYAEEVTVPSVKVFKVP 116 (336)
T ss_pred ccccccEEEEecc------------------------------------------------chhhheeccccceeeccCC
Confidence 9999999965421 2599999999999999999
Q ss_pred CCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceE
Q 022819 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (291)
Q Consensus 164 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G-~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~ 242 (291)
+.+++++||++.+.++|||..+.+..++++|++|||+. +|++|++++|+++..|+ ++|++.+..+|++.+++-|+.+.
T Consensus 117 e~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~ 195 (336)
T KOG1197|consen 117 EAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHP 195 (336)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcce
Confidence 99999999999999999999999999999999999996 49999999999999999 99999999999999999999999
Q ss_pred eCCCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 243 LNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 243 i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
|+++. +|+.+.++++|.| |+|+++|++|. +.++..+.+|++.|.+
T Consensus 196 I~y~~--eD~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~G~m 241 (336)
T KOG1197|consen 196 IDYST--EDYVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPMGKM 241 (336)
T ss_pred eeccc--hhHHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccCceE
Confidence 99987 9999999999988 99999999999 7899999999999975
No 30
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.3e-37 Score=286.86 Aligned_cols=276 Identities=35% Similarity=0.645 Sum_probs=230.5
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCCC
Q 022819 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEG 88 (291)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~G 88 (291)
|+|||+++.++++++++++.+.|.+.++||+|||.++++|++|+..+.+.. ..|.++|+|++|+|+++|+++..|++|
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~G 80 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPTPLPAVLGHEGAGVVEAVGSAVTGLKPG 80 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCC
Confidence 578999999987789999999999999999999999999999999987754 457799999999999999999999999
Q ss_pred CEEEeecccCCCCCccccCCCCCccccccccc-cccccCCcccceeccC-Cc-cccccCccceeeEEEeeccceEECCCC
Q 022819 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKG-KP-VYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (291)
Q Consensus 89 drV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~-~~-~~~~~~~g~~~~~~~~~~~~~~~ip~~ 165 (291)
|+|++.+. +|+.|..|..+++++|....... .|.. .+|..-+...+ -. ..+....|+|++|+.++.+.++++|++
T Consensus 81 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 81 DHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 99998765 89999999999999998654211 1111 11100000000 00 000112469999999999999999999
Q ss_pred CChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCC
Q 022819 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 166 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~ 245 (291)
+++++++.+++.+.+|+.++.+...++++++|+|+|+|++|++++|+|+.+|++.++++++++++.+.++++|++.++++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~ 238 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 99999999999999999988888899999999999889999999999999999779999999999999999999989887
Q ss_pred CCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++ .++.+.+.+++.+++|+++|++|.+..+..+++.++++|++
T Consensus 239 ~~--~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~ 281 (365)
T cd08278 239 KE--EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTL 281 (365)
T ss_pred CC--cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEE
Confidence 65 66777788877339999999999877899999999999875
No 31
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.7e-37 Score=285.29 Aligned_cols=263 Identities=28% Similarity=0.440 Sum_probs=225.8
Q ss_pred eEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCC------
Q 022819 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE------ 84 (291)
Q Consensus 14 ~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~------ 84 (291)
||+++.++++++++++.+.|.|+++||+|||.++++|++|+..+.|.. .+|.++|||++|+|+++|+++.+
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 789999988779999999999999999999999999999999887764 46789999999999999999986
Q ss_pred CCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeecc-ceEECC
Q 022819 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKVS 163 (291)
Q Consensus 85 ~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~ip 163 (291)
|++||+|+..+..+|+.|..|..+.+++|....+. |.....+ . ....|+|++|+.++.+ +++++|
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~--~~~~~~~----------~--~~~~g~~a~~~~v~~~~~~~~lP 147 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY--GHEASCD----------D--PHLSGGYAEHIYLPPGTAIVRVP 147 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchhc--ccccccc----------C--CCCCcccceEEEecCCCceEECC
Confidence 99999999999999999999999999999887542 2110000 0 0012599999999986 799999
Q ss_pred CCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEe
Q 022819 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (291)
Q Consensus 164 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i 243 (291)
++++++.++++++.+.|||+++.+....+++++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.++
T Consensus 148 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi 227 (361)
T cd08231 148 DNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATI 227 (361)
T ss_pred CCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEE
Confidence 99999999999889999999987777777999999999999999999999999987889999999999999999999888
Q ss_pred CCCCCC-chHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 244 NPNDNN-EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 244 ~~~~~~-~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+++... .++...+.+++++ ++|++||++|+...+..+++.++++|++
T Consensus 228 ~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~ 276 (361)
T cd08231 228 DIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTY 276 (361)
T ss_pred cCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEE
Confidence 876421 2234567888877 8999999999877889999999999986
No 32
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.6e-37 Score=281.46 Aligned_cols=256 Identities=27% Similarity=0.359 Sum_probs=224.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
|||+++.+++. +.+++.+.|.+.++||+|||.++++|++|+..+.+.. ..|.++|||++|+|+++|+++.+|++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 68999998875 8899999999999999999999999999998877654 4578999999999999999999999999
Q ss_pred EEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeecc--ceEECCCCCC
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~ 167 (291)
+|++.+..+|+.|..|..++++.|+.... .++.. ....|+|++|+.++.+ .++++|++++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~-~~~~~-----------------~~~~g~~~~y~~v~~~~~~~~~lP~~~~ 141 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLG-GWKFS-----------------NFKDGVFAEYFHVNDADANLAPLPDGLT 141 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCC-Ccccc-----------------CCCCcceeEEEEcchhhCceEECCCCCC
Confidence 99998888999999999999999987521 01000 0012599999999874 8999999999
Q ss_pred hhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCC
Q 022819 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (291)
Q Consensus 168 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~ 247 (291)
+++++.++..+.+||++ .+..+++++++|||+|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++++
T Consensus 142 ~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~ 220 (351)
T cd08285 142 DEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN 220 (351)
T ss_pred HHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC
Confidence 99999998899999998 47788999999999988999999999999999977999999999999999999999998865
Q ss_pred CCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 248 ~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.++.+.+.+++.+ ++|++||++|++..+..++++++++|++
T Consensus 221 --~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~ 262 (351)
T cd08285 221 --GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTI 262 (351)
T ss_pred --CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEE
Confidence 6677778887766 8999999999877889999999999976
No 33
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=3.2e-37 Score=281.81 Aligned_cols=238 Identities=18% Similarity=0.199 Sum_probs=193.6
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC-------CCCcccCcceeEEEEEcCCCCC
Q 022819 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-------IFPRIFGHEASGIVESVGPGVT 83 (291)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~-------~~p~~~G~e~~G~V~~vG~~~~ 83 (291)
|.+|++++.+|++ ++++++|.|. +++||+|||+++|||++|+++++|.+ .+|.++|||++|+|+++|.+
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~-- 76 (341)
T cd08237 1 MINQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG-- 76 (341)
T ss_pred CcccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--
Confidence 3568999999986 9999999995 99999999999999999999998864 35899999999999998764
Q ss_pred CCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECC
Q 022819 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (291)
Q Consensus 84 ~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip 163 (291)
+|++||||++.+..+|+ |..|. ..++|+...+. |.. .+ |+|+||+.++.++++++|
T Consensus 77 ~~~vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~~--g~~-~~------------------G~~aey~~v~~~~~~~vP 132 (341)
T cd08237 77 TYKVGTKVVMVPNTPVE-KDEII--PENYLPSSRFR--SSG-YD------------------GFMQDYVFLPPDRLVKLP 132 (341)
T ss_pred ccCCCCEEEECCCCCch-hcccc--hhccCCCccee--Eec-CC------------------CceEEEEEEchHHeEECC
Confidence 69999999998887777 33453 45678765432 211 22 499999999999999999
Q ss_pred CCCChhhhhhhhhhhhhhHhHHHhh--cCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHHcCCc
Q 022819 164 SIAPLEKICLLSCGLSAGLGAAWNV--ADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVT 240 (291)
Q Consensus 164 ~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~vlV~G~g~~G~~~i~~a~~-~g~~~vi~~~~~~~~~~~a~~~g~~ 240 (291)
+++++++|+++. .++++|+++... ..++++++|||+|+|++|++++|+|+. +|..+|++++++++|++++++++.+
T Consensus 133 ~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~ 211 (341)
T cd08237 133 DNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADET 211 (341)
T ss_pred CCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCce
Confidence 999999887665 788888876543 456889999999999999999999986 6655899999999999999886654
Q ss_pred eEeCCCCCCchHHHHHHHHhcC-CccEEEEccCC---hHHHHHHHHhhccCccc
Q 022819 241 EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD---TGMITTALQSCCDVRSI 290 (291)
Q Consensus 241 ~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~---~~~~~~~~~~l~~~G~i 290 (291)
..++ + +... ++|+|||++|+ +..+..++++++++|++
T Consensus 212 ~~~~------~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~i 252 (341)
T cd08237 212 YLID------D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTI 252 (341)
T ss_pred eehh------h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCCcEE
Confidence 3221 1 1122 69999999994 46789999999999986
No 34
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=2.4e-36 Score=278.10 Aligned_cols=275 Identities=40% Similarity=0.726 Sum_probs=231.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCCCCE
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~Gdr 90 (291)
|||+++.+++.+++++++|.|.++++||+||+.++++|+.|...+.+.. .+|.++|+|++|+|+++|++++.|++||+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPAPLPAVLGHEGAGVVEEVGPGVTGVKPGDH 80 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCCCCCccccccceEEEEEeCCCccccCCCCE
Confidence 6899999998889999999999999999999999999999999888765 45678999999999999999999999999
Q ss_pred EEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhh
Q 022819 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (291)
Q Consensus 91 V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~ 170 (291)
|+..+..+|++|.+|.+++.+.|......-+|.- .++..++.-.|.........|+|++|+.++.+.++++|+++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~ 159 (363)
T cd08279 81 VVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQL-PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR 159 (363)
T ss_pred EEECCCCCCCCChhhcCCCcccCccccccccccc-CCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence 9999999999999999999999987642111110 000000000000111112346999999999999999999999999
Q ss_pred hhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 022819 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (291)
Q Consensus 171 aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~ 250 (291)
++.+++.+.+||..+.+..++.++++|+|+|+|++|.+++++|+.+|+.+|+++++++++.+.++++|++.+++.+. .
T Consensus 160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~--~ 237 (363)
T cd08279 160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE--D 237 (363)
T ss_pred eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC--c
Confidence 99999999999999888899999999999988999999999999999955999999999999999999988888765 5
Q ss_pred hHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 251 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 251 ~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++...+.+++.+ ++|++||++++...+..++++++++|++
T Consensus 238 ~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~ 278 (363)
T cd08279 238 DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTA 278 (363)
T ss_pred cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeE
Confidence 677778887755 8999999999767889999999999876
No 35
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.2e-36 Score=275.45 Aligned_cols=250 Identities=25% Similarity=0.411 Sum_probs=216.6
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
|||+++.+++. ++++++|.|.|.++|++||+.++++|++|+..+.|.. .+|.++|||++|+|+++|+++..|++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 58999998874 9999999999999999999999999999999887765 3588999999999999999999999999
Q ss_pred EEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChh
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~ 169 (291)
+|++.+..+|+.|..|.++++++|....+ +++. .+ |+|++|+.++...++++|++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~~~~~~~~~ip~~~~~~ 138 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV--LGVH-RD------------------GGFSEYAVVPAKNAHRIPDAIADQ 138 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCce--EEEc-cC------------------CcceeeEEechHHeEECcCCCCHH
Confidence 99999999999999999999999976543 2211 12 489999999999999999999998
Q ss_pred hhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 022819 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (291)
Q Consensus 170 ~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~-~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~ 248 (291)
.++ +...+.++|. +.+..+++++++|+|+|+|++|++++|+|+. +|+..++++++++++.++++++|++.++++++
T Consensus 139 ~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~- 215 (339)
T PRK10083 139 YAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ- 215 (339)
T ss_pred HHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc-
Confidence 876 4457778885 5678899999999999999999999999996 69977888999999999999999999998764
Q ss_pred CchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 249 ~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.++.+.+.. .+ .+|++||++|++..+..++++++++|++
T Consensus 216 -~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~ 255 (339)
T PRK10083 216 -EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPAARI 255 (339)
T ss_pred -ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEE
Confidence 556555543 23 5689999999877899999999999986
No 36
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=3.4e-36 Score=275.60 Aligned_cols=254 Identities=28% Similarity=0.442 Sum_probs=222.7
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC------------CCCcccCcceeEEEEEcCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------------IFPRIFGHEASGIVESVGP 80 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~------------~~p~~~G~e~~G~V~~vG~ 80 (291)
|||+++.++++ +++++.|.|++.+++|+||+.++++|+.|+.++.|.. .+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 68999998875 9999999999999999999999999999998887752 2467899999999999999
Q ss_pred CCC--CCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeecc-
Q 022819 81 GVT--EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG- 157 (291)
Q Consensus 81 ~~~--~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~- 157 (291)
++. .|++||+|+..+..+|+.|..|..++.+.|+... .+|+... ..|+|++|+.++.+
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~-----------------~~g~~~~~~~~~~~~ 140 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD--LYGFQNN-----------------VNGGMAEYMRFPKEA 140 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc--ceeeccC-----------------CCCcceeeEEccccc
Confidence 998 8999999999999999999999999999997643 3443100 12599999999988
Q ss_pred ceEECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc
Q 022819 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (291)
Q Consensus 158 ~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~ 237 (291)
.++++|+++++++++.+ ..+.++|+++ +..++.++++|+|.|+|.+|.+++++|+.+|+..++++++++++.++++++
T Consensus 141 ~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~ 218 (350)
T cd08256 141 IVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKF 218 (350)
T ss_pred ceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHc
Confidence 57899999999999988 7889999986 788899999999988899999999999999986788999999999999999
Q ss_pred CCceEeCCCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 238 GVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 238 g~~~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
|++.+++.+. .++.+.+.+++.+ ++|++||++|+...+..++++++++|++
T Consensus 219 g~~~v~~~~~--~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~ 270 (350)
T cd08256 219 GADVVLNPPE--VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRF 270 (350)
T ss_pred CCcEEecCCC--cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEE
Confidence 9988888764 6777788888777 8999999999766789999999999886
No 37
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=3.6e-36 Score=273.75 Aligned_cols=251 Identities=25% Similarity=0.448 Sum_probs=220.9
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
|||+++.+++.+++++++|.|++.++||+||+.++++|++|...+.|.. .+|.++|||++|+|+++|+++.+|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 6899999996679999999999999999999999999999999887753 4577999999999999999999999999
Q ss_pred EEEeec-ccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCCh
Q 022819 90 HVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (291)
Q Consensus 90 rV~~~~-~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~ 168 (291)
+|++.+ ...|+.|..|..+.++.|....+ .|+. .+ |+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~--~~~~-~~------------------g~~a~~~~v~~~~~~~lp~~~~~ 139 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV--TGVT-RD------------------GGYAEYMLAPAEALARIPDDLDA 139 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc--cCcc-cC------------------CcceeEEEEchhheEeCCCCCCH
Confidence 998754 46799999999999999998764 2221 12 48999999999999999999999
Q ss_pred hhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 022819 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (291)
Q Consensus 169 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~ 248 (291)
++++.+++.+.++|+++.. ..+.++++|||+|+|++|++++++|+.+|+ +++++++++++++.++++|++.++++..
T Consensus 140 ~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~- 216 (333)
T cd08296 140 AEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK- 216 (333)
T ss_pred HHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC-
Confidence 9999999999999998754 489999999999999999999999999999 8999999999999999999988888765
Q ss_pred CchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 249 ~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.++.+.++++ +++|+++|++|....+..++++++++|++
T Consensus 217 -~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~ 255 (333)
T cd08296 217 -EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPRGKL 255 (333)
T ss_pred -ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccCCEE
Confidence 5566666665 47999999998667899999999999876
No 38
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=3.6e-36 Score=274.59 Aligned_cols=256 Identities=32% Similarity=0.453 Sum_probs=224.5
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~G 88 (291)
||++++.+++. +++.++|.|.| .++||+||+.++++|++|+..+.+.+ .+|.++|+|++|+|+++|+++.+|++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 57999998875 89999999999 89999999999999999998887754 457899999999999999999999999
Q ss_pred CEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeecc--ceEECCCCC
Q 022819 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIA 166 (291)
Q Consensus 89 drV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~ 166 (291)
|+|+..+..+|+.|.+|.+++.++|+.......... ...|+|++|+.++.+ .++++|+++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~g~~~~~~~v~~~~~~~~~lP~~~ 141 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGN------------------RIDGGQAEYVRVPYADMNLAKIPDGL 141 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCccccccc------------------CCCCeeeEEEEecchhCeEEECCCCC
Confidence 999999999999999999999999987653211100 012499999999987 899999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~ 246 (291)
++++++.+++.+.|||+++ ...+++++++|||.|+|.+|.+++|+|+.+|...++++++++++.++++++|++.+++++
T Consensus 142 ~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~ 220 (347)
T cd05278 142 PDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPK 220 (347)
T ss_pred CHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCC
Confidence 9999999999999999986 678899999999988899999999999999965788888889999999999999898886
Q ss_pred CCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 247 ~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
. .++.+.+++.+.+ ++|++||++++...+..++++|+++|++
T Consensus 221 ~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~ 263 (347)
T cd05278 221 N--GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTI 263 (347)
T ss_pred c--chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEE
Confidence 5 5677888887775 8999999999866889999999999976
No 39
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=5.3e-36 Score=272.85 Aligned_cols=253 Identities=30% Similarity=0.455 Sum_probs=226.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC------CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
|||+++.++++++++++.+.|.+++++|+||+.++++|++|+..+.|.+ .+|.++|+|++|+|+++|+++..|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 5899999887789999999999999999999999999999998887654 3468899999999999999999999
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||+|+..+...|+.|..|..+..++|++..+. |.. .+ |+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~------------------g~~~~~~~v~~~~~~~~P~~l 139 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFP--GIG-TD------------------GGFAEYLLVPSRRLVKLPRGL 139 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCccc--Ccc-CC------------------CcceeeEEecHHHeEECCCCC
Confidence 999999999889999999999999999988763 321 22 499999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHHcCCceEeC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~vlV~G~g~~G~~~i~~a~~~g-~~~vi~~~~~~~~~~~a~~~g~~~~i~ 244 (291)
++++++.+++.+.|||+++.+. ..+.++++|||+|+|++|++++|+|+.+| . +|+++++++++.+.++++|++++++
T Consensus 140 s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~ 218 (340)
T cd05284 140 DPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLN 218 (340)
T ss_pred CHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEc
Confidence 9999999999999999988776 46888999999999889999999999999 6 8898989999999999999998888
Q ss_pred CCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 245 ~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++. . +.+.+++++.+ ++|+++|++|+...+..++++++++|++
T Consensus 219 ~~~--~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~ 262 (340)
T cd05284 219 ASD--D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRY 262 (340)
T ss_pred CCc--c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEE
Confidence 865 4 77788888776 8999999999877889999999999876
No 40
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=2.4e-35 Score=269.32 Aligned_cols=255 Identities=29% Similarity=0.430 Sum_probs=224.9
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~G 88 (291)
|||+++.+++. ++++++|.|+| .++||+||++++++|+.|+.++.|.+ .+|.++|||++|+|+++|+++..+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 68999998875 99999999986 79999999999999999999988865 337889999999999999999999999
Q ss_pred CEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeecc--ceEECCCCC
Q 022819 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIA 166 (291)
Q Consensus 89 drV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~ 166 (291)
|+|++.+..+|+.|.+|..++++.|....+.. |.. .+ |+|++|+.++.+ .++++|+++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~------------------g~~~~~~~v~~~~~~~~~lp~~~ 139 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWIL-GNL-ID------------------GTQAEYVRIPHADNSLYKLPEGV 139 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCccccc-ccc-cC------------------CeeeeEEEcccccCceEECCCCC
Confidence 99999998899999999999999888775521 221 12 489999999987 899999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~ 246 (291)
++.+++.+.+.+.+||..+....++.++++++|+|+|.+|.+++|+|+.+|+.+++++++++++.++++++|++.+++++
T Consensus 140 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (345)
T cd08286 140 DEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSA 219 (345)
T ss_pred CHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccc
Confidence 99999999999999998877888899999999998899999999999999944889999999999999999999899886
Q ss_pred CCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 247 ~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+ .++...+.+++.+ ++|++||++|....+..+++.++++|++
T Consensus 220 ~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~ 262 (345)
T cd08286 220 K--GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHI 262 (345)
T ss_pred c--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEE
Confidence 5 5677777777766 8999999999877889999999999876
No 41
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.8e-35 Score=275.07 Aligned_cols=260 Identities=21% Similarity=0.230 Sum_probs=221.2
Q ss_pred cceeeeEEEEec--CCC---CeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC-------------CCCcccCcc
Q 022819 9 QVITCKAAVAWG--AGQ---PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-------------IFPRIFGHE 70 (291)
Q Consensus 9 ~~~~~~a~~~~~--~~~---~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~-------------~~p~~~G~e 70 (291)
.+.+|+|+++.. .+. .++++++|.|.++++||+||+.+++||.+|+..+.+.. ..+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 567899999863 222 37899999999999999999999999999988876641 122488999
Q ss_pred eeEEEEEcCCCCCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceee
Q 022819 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150 (291)
Q Consensus 71 ~~G~V~~vG~~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~ 150 (291)
++|+|+++|++++.|++||+|++.+...|+.|..|.++..++|+...+ +|+...+ |+|++
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~~~~------------------g~~a~ 148 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI--WGYETNY------------------GSFAQ 148 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc--ccccCCC------------------Cccee
Confidence 999999999999999999999999999999999999999999986543 4432122 49999
Q ss_pred EEEeeccceEECCCCCChhhhhhhhhhhhhhHhHHHhh--cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 151 YTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV--ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 151 ~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
|+.++...++++|+++++++++.+.+.+.+||+++... .+++++++|+|+|+ |++|++++++|+.+|+ .+++++++
T Consensus 149 y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s 227 (393)
T cd08246 149 FALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSS 227 (393)
T ss_pred EEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCC
Confidence 99999999999999999999999999999999987655 67899999999997 9999999999999999 77788889
Q ss_pred hhhHHHHHHcCCceEeCCCCCC--------------------chHHHHHHHHhcC--CccEEEEccCChHHHHHHHHhhc
Q 022819 228 PEKCEKAKAFGVTEFLNPNDNN--------------------EPVQQVIKRITDG--GADYSFECIGDTGMITTALQSCC 285 (291)
Q Consensus 228 ~~~~~~a~~~g~~~~i~~~~~~--------------------~~~~~~~~~~~~g--~~d~vld~~g~~~~~~~~~~~l~ 285 (291)
+++++.++++|++.++++++.+ ..+.+.+.+++++ ++|++||++|+ ..+..++++++
T Consensus 228 ~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l~ 306 (393)
T cd08246 228 EEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVCD 306 (393)
T ss_pred HHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHhc
Confidence 9999999999999988874311 1356677787776 69999999997 67889999999
Q ss_pred cCccc
Q 022819 286 DVRSI 290 (291)
Q Consensus 286 ~~G~i 290 (291)
++|++
T Consensus 307 ~~G~~ 311 (393)
T cd08246 307 RGGMV 311 (393)
T ss_pred cCCEE
Confidence 99975
No 42
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=4.9e-35 Score=269.49 Aligned_cols=258 Identities=28% Similarity=0.437 Sum_probs=213.8
Q ss_pred ceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhccc------CCCCcccCcceeEEEEEcCCCCC
Q 022819 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------AIFPRIFGHEASGIVESVGPGVT 83 (291)
Q Consensus 10 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~------~~~p~~~G~e~~G~V~~vG~~~~ 83 (291)
...+++.++.++. .+++++.+.|.+.++||+||++++++|++|+.++.+. ..+|.++|||++|+|+++|+++.
T Consensus 15 ~~~~~~~~~~~~~-~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (364)
T PLN02702 15 EEENMAAWLVGVN-TLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVK 93 (364)
T ss_pred ccccceEEEecCC-ceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCC
Confidence 3445555566664 4899999999999999999999999999999988762 13577899999999999999999
Q ss_pred CCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECC
Q 022819 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (291)
Q Consensus 84 ~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip 163 (291)
.|++||+|+..+..+|+.|..|..+.++.|+...+ ++.... .|+|++|+.++.+.++++|
T Consensus 94 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~--~~~~~~------------------~g~~~~y~~v~~~~~~~~P 153 (364)
T PLN02702 94 HLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF--FATPPV------------------HGSLANQVVHPADLCFKLP 153 (364)
T ss_pred CCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc--cCCCCC------------------CCcccceEEcchHHeEECC
Confidence 99999999999999999999999999999986432 111001 2499999999999999999
Q ss_pred CCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEe
Q 022819 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (291)
Q Consensus 164 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i 243 (291)
++++++++++.. .+.++|+++ +..++.++++++|+|+|++|++++|+|+.+|+..++++++++++.++++++|++.++
T Consensus 154 ~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~ 231 (364)
T PLN02702 154 ENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIV 231 (364)
T ss_pred CCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence 999999988632 445577765 778899999999999899999999999999997788898899999999999999887
Q ss_pred CCCCCCchHHHHHHHH---hcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 244 NPNDNNEPVQQVIKRI---TDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 244 ~~~~~~~~~~~~~~~~---~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+++....++.+.+.++ +.+++|++||++|+...+..++++++++|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~ 281 (364)
T PLN02702 232 LVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKV 281 (364)
T ss_pred ecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 6543234566666554 2348999999999777899999999999986
No 43
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=4.1e-35 Score=272.20 Aligned_cols=271 Identities=29% Similarity=0.420 Sum_probs=223.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~G 88 (291)
|||+++.++. .++++++|.|.| ++++|+||+.++++|++|...+.|.+ .+|.++|||++|+|+++|+++.+|++|
T Consensus 1 m~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKG-DVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCC-CceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 6899998875 499999999998 49999999999999999999988865 357899999999999999999999999
Q ss_pred CEEEeecccCCCCCccccCCCCCccccccccc--cccccCCcccceeccCCccccccCccceeeEEEeecc--ceEECCC
Q 022819 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER--RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSS 164 (291)
Q Consensus 89 drV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~--~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~ip~ 164 (291)
|+|+..+...|+.|.+|..+.++.|+++.... .+.+... ..++.+..-...+..|+|++|+.++.+ .++++|+
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~ 156 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHA---GAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD 156 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccc---cccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence 99999988899999999999999998765321 1100000 000000000000123699999999988 8999999
Q ss_pred CCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeC
Q 022819 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (291)
Q Consensus 165 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~ 244 (291)
++++++++.++..+.+||+++ +..++.++++|+|+|+|++|.+++++|+.+|+.+++++++++++.+.+++++...+++
T Consensus 157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~ 235 (386)
T cd08283 157 DLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETIN 235 (386)
T ss_pred CCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEc
Confidence 999999999999999999987 8889999999999988999999999999999856999999999999999985446777
Q ss_pred CCCCCc-hHHHHHHHHhcC-CccEEEEccCC---------------------hHHHHHHHHhhccCccc
Q 022819 245 PNDNNE-PVQQVIKRITDG-GADYSFECIGD---------------------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 245 ~~~~~~-~~~~~~~~~~~g-~~d~vld~~g~---------------------~~~~~~~~~~l~~~G~i 290 (291)
+.. . ++...+.+++.+ ++|++||++|+ ...++.++++++++|++
T Consensus 236 ~~~--~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~i 302 (386)
T cd08283 236 FEE--VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTV 302 (386)
T ss_pred CCc--chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEE
Confidence 654 4 477888888877 89999999975 24688899999999976
No 44
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=4.1e-35 Score=268.35 Aligned_cols=255 Identities=26% Similarity=0.401 Sum_probs=224.5
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---------------CCCcccCcceeEEEEE
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---------------IFPRIFGHEASGIVES 77 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---------------~~p~~~G~e~~G~V~~ 77 (291)
|||+++..++.+++++++|.|++.++||+||+.++++|++|+..+.+.+ .+|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 6899999888889999999999999999999999999999998876642 2357899999999999
Q ss_pred cCCCCCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeecc
Q 022819 78 VGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157 (291)
Q Consensus 78 vG~~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 157 (291)
+|+++.++++||+|+.++...|+.|..|.++.+++|....+. |.. . .|+|++|+.++.+
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~------------------~g~~~~~~~~~~~ 139 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL--GIF-Q------------------DGGYAEYVIVPHS 139 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce--eee-c------------------cCcceeeEEecHH
Confidence 999999999999999999999999999999999999775432 211 1 2489999999999
Q ss_pred ceEECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc
Q 022819 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (291)
Q Consensus 158 ~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~ 237 (291)
.++++|+++++.+++.+.+.+.+||+++.....+.++++|+|+|+|++|++++|+|+.+|+++|+++++++++.+.++++
T Consensus 140 ~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~ 219 (350)
T cd08240 140 RYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAA 219 (350)
T ss_pred HeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh
Confidence 99999999999999999999999999887777777899999998899999999999999997888998999999999999
Q ss_pred CCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 238 g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
|++.+++.++ .++.+.+.+...+++|++||++|.+..+..++++|+++|++
T Consensus 220 g~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~ 270 (350)
T cd08240 220 GADVVVNGSD--PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKL 270 (350)
T ss_pred CCcEEecCCC--ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeE
Confidence 9988887764 56666777766558999999999777899999999999876
No 45
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=5.6e-35 Score=266.59 Aligned_cols=252 Identities=27% Similarity=0.377 Sum_probs=217.0
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC------CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
||++++.++++++++.+.|.|.|+++||+||++++++|++|+.++.+.. .+|.++|||++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 5899999988789999999999999999999999999999998765421 3577899999999999999999999
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||+|+..+..+|..|.+|..+.+++|+...+ .|+. .+ |+|++|+.++.++++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~iP~~l 139 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG--VGVN-RP------------------GAFAEYLVIPAFNVWKIPDDI 139 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcce--eeec-CC------------------CcceeeEEechHHeEECcCCC
Confidence 99999999999999999999999999987543 2221 12 499999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~ 246 (291)
++++++.+ ..+.++++++.. ...++++|+|+|+|++|.+++|+|+.+|+++++++++++++.+.++++|++.+++++
T Consensus 140 ~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~ 216 (341)
T PRK05396 140 PDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVA 216 (341)
T ss_pred CHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCc
Confidence 99888755 455666655432 345899999998899999999999999986688888899999999999999999886
Q ss_pred CCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 247 ~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+ .++.+.+.+++.+ ++|++|||+|+...+..++++++++|++
T Consensus 217 ~--~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~ 259 (341)
T PRK05396 217 K--EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRI 259 (341)
T ss_pred c--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 5 6677888888766 8999999999877889999999999875
No 46
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=9.4e-35 Score=265.39 Aligned_cols=255 Identities=30% Similarity=0.498 Sum_probs=225.4
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
||||++.+++.++++++.|.|.+.+++|+||+.++++|+.|+..+.|.. .+|.++|+|++|+|+++|+++..|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 6999999888779999999999999999999999999999998887765 3478899999999999999999999999
Q ss_pred EEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeecc--ceEECCCCCC
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~ 167 (291)
+|+..+...|+.|.+|..+..+.|+...+ .|+. .+ |+|++|+.++.. .++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~~~iP~~~~ 139 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ--PGFT-HP------------------GSFAEYVAVPRADVNLVRLPDDVD 139 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc--cccC-CC------------------CcceeEEEcccccCceEECCCCCC
Confidence 99987778899999999999999998643 2221 12 489999999874 8999999999
Q ss_pred hhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCC
Q 022819 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (291)
Q Consensus 168 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~ 247 (291)
+++++.++..+.+||+++.+..++.++++++|+|+|++|++++++|+.+|+ +++++.+++++.+.++++|++.+++.+.
T Consensus 140 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 218 (345)
T cd08260 140 FVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE 218 (345)
T ss_pred HHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc
Confidence 999999998999999998788889999999999999999999999999999 8999999999999999999998988753
Q ss_pred CCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 248 ~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
..++...+..+..+++|++||++|+...+..++++++++|++
T Consensus 219 -~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~ 260 (345)
T cd08260 219 -VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRH 260 (345)
T ss_pred -chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEE
Confidence 246666777776558999999999767888999999999875
No 47
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.1e-34 Score=268.25 Aligned_cols=262 Identities=27% Similarity=0.417 Sum_probs=218.5
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
||++++.+++ +++++++|+|.+ +++||+||++++++|++|++.+.|.. .+|.++|||++|+|+++|+++..|++||
T Consensus 1 m~~~~~~~~~-~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (375)
T cd08282 1 MKAVVYGGPG-NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGAEPGLVLGHEAMGEVEEVGSAVESLKVGD 79 (375)
T ss_pred CceEEEecCC-ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCCCCCceeccccEEEEEEeCCCCCcCCCCC
Confidence 5789998876 599999999996 79999999999999999999988765 3588999999999999999999999999
Q ss_pred EEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeecc--ceEECCCCCC
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~ 167 (291)
+|+..+..+|+.|..|.++++++|....+...|.. .|... ..+ ..|+|++|+.++.+ .++++|++++
T Consensus 80 ~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~--~~g~~a~y~~v~~~~~~~~~lP~~~~ 148 (375)
T cd08282 80 RVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGA--YGYVD-------MGP--YGGGQAEYLRVPYADFNLLKLPDRDG 148 (375)
T ss_pred EEEEeCCCCCCCCHHHHCcCcccCCCCCccccccc--ccccc-------cCC--CCCeeeeEEEeecccCcEEECCCCCC
Confidence 99999999999999999999999986432211100 00000 000 12589999999976 8999999999
Q ss_pred hh---hhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeC
Q 022819 168 LE---KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (291)
Q Consensus 168 ~~---~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~ 244 (291)
++ +++.+...+.+||+++ +..++.++++|+|+|+|++|++++|+|+++|+.+++++++++++.++++++|+ ..++
T Consensus 149 ~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~v~ 226 (375)
T cd08282 149 AKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPID 226 (375)
T ss_pred hhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eEec
Confidence 98 5677777899999987 78889999999999889999999999999998678889999999999999998 4566
Q ss_pred CCCCCchHHHHHHHHhcCCccEEEEccCChH-----------HHHHHHHhhccCccc
Q 022819 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTG-----------MITTALQSCCDVRSI 290 (291)
Q Consensus 245 ~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~-----------~~~~~~~~l~~~G~i 290 (291)
+++ .++.+.+.+++.+++|++|||+|+.. .+..++++++++|++
T Consensus 227 ~~~--~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 281 (375)
T cd08282 227 FSD--GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGI 281 (375)
T ss_pred cCc--ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEE
Confidence 654 66777777776668999999999752 488999999999875
No 48
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=9.1e-35 Score=271.87 Aligned_cols=246 Identities=20% Similarity=0.284 Sum_probs=200.7
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhh-cccC---------CCCcccCcceeEEEEEcCC
Q 022819 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW-ETQA---------IFPRIFGHEASGIVESVGP 80 (291)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~-~g~~---------~~p~~~G~e~~G~V~~vG~ 80 (291)
|+|+++++.++++ ++++++|.|.|+++||+|||.+++||++|++.+ .|.. .+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 5689999999885 999999999999999999999999999999876 4431 3678999999999999999
Q ss_pred CCC-CCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeecc--
Q 022819 81 GVT-EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-- 157 (291)
Q Consensus 81 ~~~-~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-- 157 (291)
++. .|++||||++.+...|+.|..|. + +|+. .+ |+|++|+.++.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~------------~g~~-~~------------------G~~aey~~v~~~~~ 127 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCP-G------------YSYT-YP------------------GGLATYHIIPNEVM 127 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCC-C------------cccc-CC------------------CcceEEEEecHHhc
Confidence 998 59999999999888888887762 1 1211 12 499999999987
Q ss_pred --ceEECCCCCChhhhhhh-hhhh-hhhHhH--------HHhhcCCCCCCEEEEEc-CChHHHHHHHHHHHcC--CCeEE
Q 022819 158 --CAVKVSSIAPLEKICLL-SCGL-SAGLGA--------AWNVADISKGSTVVIFG-LGTVGLSVAQGAKARG--ASRII 222 (291)
Q Consensus 158 --~~~~ip~~~~~~~aa~~-~~~~-~ta~~~--------l~~~~~~~~~~~vlV~G-~g~~G~~~i~~a~~~g--~~~vi 222 (291)
.++++|+++++++++++ +... .+++.+ +.+..+++++++|+|+| +|++|++++|+|+.+| +.+|+
T Consensus 128 ~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi 207 (410)
T cd08238 128 EQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLV 207 (410)
T ss_pred cCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEE
Confidence 68999999999998865 2111 123322 22557889999999997 4999999999999975 45799
Q ss_pred EEcCChhhHHHHHHc--------CCc-eEeCCCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 223 GVDTNPEKCEKAKAF--------GVT-EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 223 ~~~~~~~~~~~a~~~--------g~~-~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+++++++|++.++++ |++ .++++++ ..++.+.+++++++ ++|++||++|.+..+..++++++++|++
T Consensus 208 ~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~ 284 (410)
T cd08238 208 VTDVNDERLARAQRLFPPEAASRGIELLYVNPAT-IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCL 284 (410)
T ss_pred EEcCCHHHHHHHHHhccccccccCceEEEECCCc-cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeE
Confidence 999999999999997 666 4676642 14577788888887 8999999999888999999999988864
No 49
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=1.4e-34 Score=266.62 Aligned_cols=275 Identities=35% Similarity=0.480 Sum_probs=228.6
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCC---CCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE---FNE 87 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~---~~~ 87 (291)
|+||++.+++.++++++.|+|.++++||+||+.++++|++|+..+.+.+ .+|.++|||++|+|+++|+++.+ |++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~ 80 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPFPPPFVLGHEISGEVVEVGPNVENPYGLSV 80 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCCCCCcccccccceEEEEeCCCCCCCCcCCC
Confidence 6899999987779999999999999999999999999999999887755 45779999999999999999988 999
Q ss_pred CCEEEeecccCCCCCccccCCCCCcccccccc-ccccccCCcccceeccCCccccc-cCccceeeEEEeeccceEECCCC
Q 022819 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHY-CAVSSFSEYTVVHSGCAVKVSSI 165 (291)
Q Consensus 88 GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~ 165 (291)
||+|+..+..+|+.|.+|..+.+++|++..+. ..+....+|-+.+..... .+.+ ...|+|++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~P~~ 159 (367)
T cd08263 81 GDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDG-GPVYMYSMGGLAEYAVVPATALAPLPES 159 (367)
T ss_pred CCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCC-CccccccCCcceeEEEechhhEEECCCC
Confidence 99999988889999999999999999987521 101000111000000000 0000 01258999999999999999999
Q ss_pred CChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCC
Q 022819 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 166 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~ 245 (291)
+++.+++.+++.+.|||.++.....+.++++|+|+|+|++|.+++++|+.+|+..++++++++++.+.++++|++.+++.
T Consensus 160 is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~ 239 (367)
T cd08263 160 LDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNA 239 (367)
T ss_pred CCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecC
Confidence 99999999999999999998888888999999999889999999999999999559999889999999999999989988
Q ss_pred CCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+. .++...+.+.+.+ ++|++||++++...+..++++++++|++
T Consensus 240 ~~--~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~ 283 (367)
T cd08263 240 AK--EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRA 283 (367)
T ss_pred Cc--ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEE
Confidence 65 6777778877765 8999999999865789999999999886
No 50
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=2.1e-34 Score=268.50 Aligned_cols=260 Identities=23% Similarity=0.300 Sum_probs=220.4
Q ss_pred cceeeeEEEEec--CCC---CeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC-------------CCC-cccCc
Q 022819 9 QVITCKAAVAWG--AGQ---PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-------------IFP-RIFGH 69 (291)
Q Consensus 9 ~~~~~~a~~~~~--~~~---~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~-------------~~p-~~~G~ 69 (291)
++.+||||++.. .++ .+++.++|.|.++++||+||++++++|.+|.....+.. ..| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 567899999954 443 38999999999999999999999999998876654421 123 37999
Q ss_pred ceeEEEEEcCCCCCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCcccee
Q 022819 70 EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFS 149 (291)
Q Consensus 70 e~~G~V~~vG~~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~ 149 (291)
|++|+|+++|+++..|++||+|++.....|++|.+|..+++++|+... .+|+...+ |+|+
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~------------------g~~a 143 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQR--IWGYETNF------------------GSFA 143 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccc--cccccCCC------------------ccce
Confidence 999999999999999999999999999999999999999999997653 24432222 4999
Q ss_pred eEEEeeccceEECCCCCChhhhhhhhhhhhhhHhHHHh--hcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 022819 150 EYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN--VADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT 226 (291)
Q Consensus 150 ~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~ 226 (291)
+|+.++.+.++++|+++++++++.+.+.+.+||.++.. ..++.++++++|+|+ |++|++++++|+.+|+ +++++++
T Consensus 144 e~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~ 222 (398)
T TIGR01751 144 EFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVS 222 (398)
T ss_pred EEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcC
Confidence 99999999999999999999999999999999998755 477889999999997 9999999999999999 7788888
Q ss_pred ChhhHHHHHHcCCceEeCCCCCC--------------------chHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhc
Q 022819 227 NPEKCEKAKAFGVTEFLNPNDNN--------------------EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCC 285 (291)
Q Consensus 227 ~~~~~~~a~~~g~~~~i~~~~~~--------------------~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~ 285 (291)
++++++.++++|++.++|+++.+ ..+.+.+.+++.+ ++|++|||+|. ..+..++++++
T Consensus 223 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l~ 301 (398)
T TIGR01751 223 SPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVCR 301 (398)
T ss_pred CHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhhc
Confidence 89999999999999999875410 1355667777776 89999999997 67889999999
Q ss_pred cCccc
Q 022819 286 DVRSI 290 (291)
Q Consensus 286 ~~G~i 290 (291)
++|++
T Consensus 302 ~~G~~ 306 (398)
T TIGR01751 302 RGGMV 306 (398)
T ss_pred cCCEE
Confidence 99875
No 51
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=3.5e-34 Score=260.81 Aligned_cols=250 Identities=34% Similarity=0.547 Sum_probs=219.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
|||+++.+++. +++.++|.|.+.++||+|||.++++|+.|+..+.+.. .+|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 58999988764 9999999999999999999999999999998887754 3477899999999999999999999999
Q ss_pred EEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChh
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~ 169 (291)
+|+..+..+|+.|..|+.++.++|..... .++. . .|+|++|+.++.+ ++++|++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~v~v~~~-~~~~p~~~~~~ 137 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV--LGVH-R------------------DGGFAEYIVVPAD-ALLVPEGLSLD 137 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe--eeec-C------------------CCcceeEEEechh-eEECCCCCCHH
Confidence 99998888999999999999999964432 1111 1 2489999999999 99999999999
Q ss_pred hhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCC
Q 022819 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (291)
Q Consensus 170 ~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~ 249 (291)
+++++ ..+.++++++ +..++.++++|||+|+|.+|.+++|+|+.+|+ +++++.+++++.++++++|++++++++.
T Consensus 138 ~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~-- 212 (337)
T cd08261 138 QAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD-- 212 (337)
T ss_pred Hhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc--
Confidence 99887 4677888876 78889999999999889999999999999999 8999988999999999999999998875
Q ss_pred chHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 250 ~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.++.+.+.+++.+ ++|++||++|+...+..+++.++++|++
T Consensus 213 ~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~ 254 (337)
T cd08261 213 EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRV 254 (337)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 5677888888776 8999999998877889999999999876
No 52
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=3.9e-34 Score=260.98 Aligned_cols=256 Identities=30% Similarity=0.435 Sum_probs=219.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCC-CCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~-~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
|+|+++..+. .++++++|+|.|. ++||+||+.++++|+.|...+.|.+ .+|.++|+|++|+|+++|+++..+++||
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTPGFVLGHEFVGEVVEVGPEVRTLKVGD 79 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCCCCCcccccceEEEEEeeCCCccccCCCC
Confidence 5789998774 5999999999985 9999999999999999998887754 3478899999999999999999999999
Q ss_pred EEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeecc--ceEECCCCCC
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~ 167 (291)
+|+..+...|+.|.+|.+++.+.|+.... +|.. + .....|+|++|+.++.+ .++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~------------~~~~~g~~~~~~~v~~~~~~~~~~p~~l~ 142 (344)
T cd08284 80 RVVSPFTIACGECFYCRRGQSGRCAKGGL--FGYA---G------------SPNLDGAQAEYVRVPFADGTLLKLPDGLS 142 (344)
T ss_pred EEEEcccCCCCCChHHhCcCcccCCCCcc--cccc---c------------cCCCCCceeEEEEcccccCceEECCCCCC
Confidence 99999888999999999999999987643 2210 0 00012589999999865 9999999999
Q ss_pred hhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCC
Q 022819 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (291)
Q Consensus 168 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~ 247 (291)
+++++.+++.+.|||+++. ..++.++++|+|+|+|.+|++++++|+.+|+.+++++++++++.++++++|+. .++.+.
T Consensus 143 ~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~ 220 (344)
T cd08284 143 DEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFED 220 (344)
T ss_pred HHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCC
Confidence 9999999999999999874 47888999999998899999999999999975789998889999999999975 455543
Q ss_pred CCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 248 ~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.++...+.+++.+ ++|++||++|+...+..++++++++|++
T Consensus 221 --~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~ 262 (344)
T cd08284 221 --AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVI 262 (344)
T ss_pred --cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEE
Confidence 5677778887776 8999999999877899999999999876
No 53
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=5.1e-34 Score=260.12 Aligned_cols=252 Identities=32% Similarity=0.469 Sum_probs=221.9
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
|||+++.+++ .+.+++.+.|.+.+++|+||++++++|+.|+..+.+.. ..|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPN-DVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCC-ceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 5899998876 49999999999999999999999999999999887764 4577999999999999999999999999
Q ss_pred EEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccc-----eEECCC
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC-----AVKVSS 164 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~ip~ 164 (291)
+|+..+..+|++|+.|..++.++|+...+. |.. .+ |+|++|+.++.+. ++++|+
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~------------------g~~~~~v~v~~~~~~~~~~~~lP~ 138 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF--GNL-YD------------------GGFAEYVRVPAWAVKRGGVLKLPD 138 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCccee--ccC-CC------------------CcceeeEEecccccccccEEECCC
Confidence 999999999999999999999999887652 221 12 4999999999998 999999
Q ss_pred CCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeC
Q 022819 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (291)
Q Consensus 165 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~ 244 (291)
++++.+++.+ ..+.+||+++. ..++.++++|+|+|+|.+|.+++|+|+.+|++.++++.+++++.+.++++|.+.+++
T Consensus 139 ~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~ 216 (343)
T cd08235 139 NVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTID 216 (343)
T ss_pred CCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEec
Confidence 9999999877 68889999874 458999999999988999999999999999943899989999999999999988888
Q ss_pred CCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 245 ~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+++ .++.+.+.+.+.+ ++|++||+++++..+..++++++++|++
T Consensus 217 ~~~--~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~ 261 (343)
T cd08235 217 AAE--EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRI 261 (343)
T ss_pred CCc--cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEE
Confidence 875 6777778887776 8999999999877889999999999875
No 54
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=5.8e-34 Score=258.61 Aligned_cols=253 Identities=32% Similarity=0.489 Sum_probs=223.0
Q ss_pred eeEEEEecCCCC-eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCCC
Q 022819 13 CKAAVAWGAGQP-LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (291)
Q Consensus 13 ~~a~~~~~~~~~-~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~~ 87 (291)
||++++..++++ +.+++.|.|.+.+++|+||+.++++|+.|...+.+.. ..|.++|+|++|+|+++|+++..|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 689999999888 6888889999999999999999999999998887754 34778999999999999999999999
Q ss_pred CCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCC
Q 022819 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (291)
Q Consensus 88 GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~ 167 (291)
||+|+.++..+|+.|.+|..++.+.|...... |.. .+ |+|++|+.++.+.++++|++++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~~ 139 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMP--GLG-ID------------------GGFAEYIVVPARALVPVPDGVP 139 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCcc--ccc-cC------------------CcceeeEEechHHeEECCCCCC
Confidence 99999999999999999999999999665432 211 11 4899999999999999999999
Q ss_pred hhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCC
Q 022819 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (291)
Q Consensus 168 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~ 247 (291)
+.+++.++..+.+||+++....++.++++|||.|+|.+|.+++++|+.+|+ +|+++++++++.+.++++|++.+++.++
T Consensus 140 ~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~ 218 (338)
T cd08254 140 FAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD 218 (338)
T ss_pred HHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCC
Confidence 999999999999999998888889999999999889999999999999999 8999999999999999999988887764
Q ss_pred CCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 248 ~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
......+ +.+.+ ++|+++|++|....+..++++|+++|++
T Consensus 219 --~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~ 259 (338)
T cd08254 219 --DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRI 259 (338)
T ss_pred --cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEE
Confidence 4555555 44444 8999999999878899999999999986
No 55
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.8e-34 Score=260.95 Aligned_cols=247 Identities=30% Similarity=0.423 Sum_probs=216.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
|||+++.+++++++++++|.|.+.++|++||++++++|+.|+..+.|.. .+|.++|+|++|+|+++|+++..+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 6899999999889999999999999999999999999999998887754 4567899999999999999998899999
Q ss_pred EEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChh
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~ 169 (291)
+|++....+|+.|++|..+++++|+...+ +|.. .+ |+|++|+.++.+.++++|+++++.
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~~~~ 139 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG--YGEE-LD------------------GFFAEYAKVKVTSLVKVPPNVSDE 139 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCccccc--cccc-cC------------------ceeeeeeecchhceEECCCCCCHH
Confidence 99999888999999999999999988654 2221 12 489999999999999999999999
Q ss_pred hhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 022819 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (291)
Q Consensus 170 ~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~ 248 (291)
+++.+.+.+.++|+++.+. .+.++++++|+|+ |.+|++++++|+.+|+ +++++++++++.+.++++ ++.+++.+
T Consensus 140 ~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~-- 214 (334)
T PRK13771 140 GAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS-- 214 (334)
T ss_pred HhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch--
Confidence 9999999999999987665 8899999999987 9999999999999999 899998999999999888 66666543
Q ss_pred CchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 249 ~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++.+.++++ +++|++||++|+ ..+..+++.++++|++
T Consensus 215 --~~~~~v~~~--~~~d~~ld~~g~-~~~~~~~~~l~~~G~~ 251 (334)
T PRK13771 215 --KFSEEVKKI--GGADIVIETVGT-PTLEESLRSLNMGGKI 251 (334)
T ss_pred --hHHHHHHhc--CCCcEEEEcCCh-HHHHHHHHHHhcCCEE
Confidence 344555554 379999999998 4678999999999975
No 56
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=9.4e-34 Score=258.67 Aligned_cols=253 Identities=32% Similarity=0.473 Sum_probs=216.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
||++++.+++. +++.+.|.|.| +++||+||+.++++|++|+..+.|.. ..|.++|||++|+|+++|+++.++++||
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPTRAPAPIGHEFVGVVEEVGSEVTSVKPGD 79 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCCCCCcccccceEEEEEEeCCCCCccCCCC
Confidence 68999998765 99999999996 89999999999999999998887764 3478999999999999999999999999
Q ss_pred EEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeecc--ceEECCCCCC
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~ 167 (291)
+|+.....+|+.|..|..++.+.|....+ +|.. .+ |+|++|+.++.+ .++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~~~lP~~l~ 138 (345)
T cd08287 80 FVIAPFAISDGTCPFCRAGFTTSCVHGGF--WGAF-VD------------------GGQGEYVRVPLADGTLVKVPGSPS 138 (345)
T ss_pred EEEeccccCCCCChhhhCcCcccCCCCCc--ccCC-CC------------------CceEEEEEcchhhCceEECCCCCC
Confidence 99886677899999999999999987543 3311 22 489999999875 9999999998
Q ss_pred hhhhh-----hhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceE
Q 022819 168 LEKIC-----LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (291)
Q Consensus 168 ~~~aa-----~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~ 242 (291)
++.+. .+...+.+||+++ ...++.++++++|.|+|++|++++|+|+.+|++.++++++++++.+.++++|++.+
T Consensus 139 ~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v 217 (345)
T cd08287 139 DDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDI 217 (345)
T ss_pred hhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceE
Confidence 72221 1224678888876 57788999999999889999999999999999669999989989999999999999
Q ss_pred eCCCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 243 LNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 243 i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++++. .++.+.+.+++.+ ++|++||++|++..+..+++.++++|++
T Consensus 218 ~~~~~--~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~ 264 (345)
T cd08287 218 VAERG--EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRV 264 (345)
T ss_pred ecCCc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEE
Confidence 98875 6677788888776 8999999999878899999999999876
No 57
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1e-33 Score=262.70 Aligned_cols=245 Identities=32% Similarity=0.509 Sum_probs=210.7
Q ss_pred CeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhccc----------CCCCcccCcceeEEEEEcCCCCCCCCCCCEEEe
Q 022819 24 PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ----------AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93 (291)
Q Consensus 24 ~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~----------~~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV~~ 93 (291)
+++++++|.|+++++||+||+.++++|++|+..+.+. ..+|.++|||++|+|+++|+++..|++||+|++
T Consensus 38 ~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 117 (384)
T cd08265 38 ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA 117 (384)
T ss_pred CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence 4999999999999999999999999999998877521 134689999999999999999999999999999
Q ss_pred ecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCC-------C
Q 022819 94 VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI-------A 166 (291)
Q Consensus 94 ~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~-------~ 166 (291)
.+..+|+.|..|..+.+++|..... .|+. .+ |+|++|+.++...++++|++ +
T Consensus 118 ~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~-~~------------------g~~~~~v~v~~~~~~~lP~~~~~~~~~~ 176 (384)
T cd08265 118 EEMMWCGMCRACRSGSPNHCKNLKE--LGFS-AD------------------GAFAEYIAVNARYAWEINELREIYSEDK 176 (384)
T ss_pred CCCCCCCCChhhhCcCcccCCCcce--eeec-CC------------------CcceeeEEechHHeEECCccccccccCC
Confidence 9999999999999999999987553 3321 12 48999999999999999986 3
Q ss_pred ChhhhhhhhhhhhhhHhHHHhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~ 245 (291)
+++ ++++...+.+||+++... .+++++++|+|+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.++++
T Consensus 177 ~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~ 255 (384)
T cd08265 177 AFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNP 255 (384)
T ss_pred CHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcc
Confidence 445 556666889999988666 689999999999889999999999999998779999989999999999999988887
Q ss_pred CCC-CchHHHHHHHHhcC-CccEEEEccCCh-HHHHHHHHhhccCccc
Q 022819 246 NDN-NEPVQQVIKRITDG-GADYSFECIGDT-GMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~-~~~~~~~~~~~~~g-~~d~vld~~g~~-~~~~~~~~~l~~~G~i 290 (291)
++. ..++...+.+++.+ ++|+|+|++|.+ ..+..++++|+++|++
T Consensus 256 ~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~ 303 (384)
T cd08265 256 TKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKI 303 (384)
T ss_pred cccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEE
Confidence 642 23677888888877 899999999973 4788999999999986
No 58
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.2e-33 Score=257.19 Aligned_cols=253 Identities=27% Similarity=0.388 Sum_probs=216.8
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCCCCE
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~Gdr 90 (291)
|||+++.+++....+++.|.|.+.++||+|||+++++|++|...+.|.. ..|.++|||++|+|+++|+++..|++||+
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~ 80 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTGRILGHEGIGIVKEVGPGVTSLKVGDR 80 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCCCCCccCCcccceEEEEECCCCccCCCCCE
Confidence 6899999887754589999999999999999999999999998887754 24678999999999999999999999999
Q ss_pred EEeec-ccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChh
Q 022819 91 VLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (291)
Q Consensus 91 V~~~~-~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~ 169 (291)
|++.+ ..+|+.|..|..+..+.|..... .|+. .+ |+|++|+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~~~ 139 (338)
T PRK09422 81 VSIAWFFEGCGHCEYCTTGRETLCRSVKN--AGYT-VD------------------GGMAEQCIVTADYAVKVPEGLDPA 139 (338)
T ss_pred EEEccCCCCCCCChhhcCCCcccCCCccc--cCcc-cc------------------CcceeEEEEchHHeEeCCCCCCHH
Confidence 98754 46899999999999999987643 3322 12 499999999999999999999999
Q ss_pred hhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 022819 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (291)
Q Consensus 170 ~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~-~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~ 248 (291)
+++.++..+.|||+++ +..+++++++|||+|+|++|++++++|+. +|+ +++++++++++++.++++|++.+++++.
T Consensus 140 ~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~- 216 (338)
T PRK09422 140 QASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR- 216 (338)
T ss_pred HeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-
Confidence 9999999999999986 77889999999999999999999999998 499 8999999999999999999988888742
Q ss_pred CchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 249 ~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
..++.+.+++.++ ++|.++++.++...+..+++.++++|++
T Consensus 217 ~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~ 257 (338)
T PRK09422 217 VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRV 257 (338)
T ss_pred cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEE
Confidence 1445666777655 6885555555667899999999999986
No 59
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1.1e-33 Score=255.53 Aligned_cols=240 Identities=27% Similarity=0.401 Sum_probs=207.8
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccCCCCcccCcceeEEEEEcCCCCCCCCCCCEEE
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVL 92 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV~ 92 (291)
|||+++.+++ +++++++|.|++.++||+||+.++++|++|...+.|.+..|.++|+|++|+|+++|++ +++||||.
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~~~~~~G~e~~G~Vv~~G~~---~~~G~~V~ 76 (319)
T cd08242 1 MKALVLDGGL-DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYPFPGVPGHEFVGIVEEGPEA---ELVGKRVV 76 (319)
T ss_pred CeeEEEeCCC-cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCCCCCccCceEEEEEEEeCCC---CCCCCeEE
Confidence 5899999875 5999999999999999999999999999999998887667889999999999999988 78999999
Q ss_pred eecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhhhh
Q 022819 93 TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIC 172 (291)
Q Consensus 93 ~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa 172 (291)
..+..+|+.|.+|..+.+++|..... .++...+ |+|++|+.++.++++++|+++++++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------------------g~~~~~~~v~~~~~~~lP~~~~~~~aa 136 (319)
T cd08242 77 GEINIACGRCEYCRRGLYTHCPNRTV--LGIVDRD------------------GAFAEYLTLPLENLHVVPDLVPDEQAV 136 (319)
T ss_pred ECCCcCCCCChhhhCcCcccCCCCcc--cCccCCC------------------CceEEEEEechHHeEECcCCCCHHHhh
Confidence 99999999999999999988887653 2221112 489999999999999999999998888
Q ss_pred hhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchH
Q 022819 173 LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV 252 (291)
Q Consensus 173 ~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~ 252 (291)
.+ ..+.++|. +.+..++.++++|+|+|+|.+|.+++|+|+.+|+ ++++++.++++++.++++|++.+++++. .
T Consensus 137 ~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~-- 209 (319)
T cd08242 137 FA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA--E-- 209 (319)
T ss_pred hh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc--c--
Confidence 64 34555665 5678889999999999989999999999999999 6999999999999999999988777642 1
Q ss_pred HHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 253 QQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 253 ~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+.+ ++|++||++|+...+..++++++++|++
T Consensus 210 -------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~ 241 (319)
T cd08242 210 -------SEGGGFDVVVEATGSPSGLELALRLVRPRGTV 241 (319)
T ss_pred -------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEE
Confidence 233 8999999999877889999999999876
No 60
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.4e-33 Score=257.75 Aligned_cols=251 Identities=31% Similarity=0.496 Sum_probs=215.0
Q ss_pred EEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhccc----C--CCCcccCcceeEEEEEcCCCCCCCCCC
Q 022819 15 AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ----A--IFPRIFGHEASGIVESVGPGVTEFNEG 88 (291)
Q Consensus 15 a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~----~--~~p~~~G~e~~G~V~~vG~~~~~~~~G 88 (291)
|+++.++. .+++++.|.|.+.++||+|||.++++|+.|...+.+. . .+|.++|+|++|+|+++|+++.+|++|
T Consensus 1 ~~~~~~~~-~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPG-DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCC-ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 45677774 4999999999999999999999999999998876321 1 356789999999999999999999999
Q ss_pred CEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCCh
Q 022819 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (291)
Q Consensus 89 drV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~ 168 (291)
|+|++.+..+|+.|.+|..+.+++|+...+. +.... .|+|++|+.++.+.++++|+++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------~g~~~~~~~v~~~~~~~lP~~~~~ 139 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATPPV------------------DGTLCRYVNHPADFCHKLPDNVSL 139 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc--ccccC------------------CCceeeeEEecHHHcEECcCCCCH
Confidence 9999999999999999999999999865431 10001 249999999999999999999999
Q ss_pred hhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 022819 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (291)
Q Consensus 169 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~ 248 (291)
++++.+ ..+.+|++++ +..+++++++++|+|+|++|.+++|+|+.+|+++|+++.+++++.++++++|++.+++++.
T Consensus 140 ~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~- 216 (343)
T cd05285 140 EEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT- 216 (343)
T ss_pred HHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc-
Confidence 999877 4778899875 8889999999999988999999999999999944899988999999999999999988765
Q ss_pred Cch---HHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 249 NEP---VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 249 ~~~---~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.+ +.+.+.+.+.+ ++|++|||+|+...+...+++++++|++
T Consensus 217 -~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~ 261 (343)
T cd05285 217 -EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTV 261 (343)
T ss_pred -ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEE
Confidence 34 36677777766 8999999999866889999999999876
No 61
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.3e-33 Score=257.69 Aligned_cols=251 Identities=34% Similarity=0.469 Sum_probs=214.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhccc------CCCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------AIFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~------~~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
||++++.+++..+++.+.|.|.|.++|++||+.++++|+.|...+.+. ...|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 589999988767999999999999999999999999999998875432 14567899999999999999999999
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||+|+..+..+|+.|..|.++++++|+...+ .|.. ..|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~v~v~~~~~~~lP~~~ 139 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKI--LGVD-------------------TDGCFAEYVVVPEENLWKNDKDI 139 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccce--Eecc-------------------CCCcceEEEEechHHcEECcCCC
Confidence 99999999999999999999999999976433 2211 12589999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~ 246 (291)
+++.+ ++...+.++++++. ...+++++|+|+|+|.+|++++|+|+.+|+.+++++++++++.+.++++|++.+++.+
T Consensus 140 ~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 216 (341)
T cd05281 140 PPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR 216 (341)
T ss_pred CHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc
Confidence 98555 55557788887654 4557899999998899999999999999986688888899999999999998888775
Q ss_pred CCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 247 ~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
. .++. .+.+++.+ ++|++||++|.......++++|+++|++
T Consensus 217 ~--~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~ 258 (341)
T cd05281 217 E--EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRV 258 (341)
T ss_pred c--ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEE
Confidence 4 5666 77777776 9999999999877889999999999875
No 62
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=5.3e-34 Score=257.05 Aligned_cols=220 Identities=24% Similarity=0.345 Sum_probs=177.4
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCC-hhhhhhhcccC------CCCcccCcceeEEEEEcCCCCCC
Q 022819 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLC-RSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE 84 (291)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~-~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~ 84 (291)
+||++++.+++. +++++.|.|+|+++||+|||++++|| ++|+.++.|.+ .+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 478999998865 99999999999999999999999996 69998888764 358999999999999999998 6
Q ss_pred CCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCC
Q 022819 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (291)
Q Consensus 85 ~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~ 164 (291)
|++||||++. +..|..|. .| .+ |+|+||+.++.+.++++|+
T Consensus 79 ~~vGdrV~~~----~~~c~~~~--------------~~---~~------------------G~~aey~~v~~~~~~~ip~ 119 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDV--------------RG---LF------------------GGASKRLVTPASRVCRLDP 119 (308)
T ss_pred CCCCCEEEEe----Cccccccc--------------cc---cC------------------CcccceEEcCHHHceeCCC
Confidence 9999999874 22232211 01 11 4999999999999999999
Q ss_pred CCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeC
Q 022819 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (291)
Q Consensus 165 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~ 244 (291)
+++++. +++. ...+||+++.+ . ..++++++|+|+|++|++++|+|+.+|+..|++++.++++++.++++ .++|
T Consensus 120 ~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~ 192 (308)
T TIGR01202 120 ALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLD 192 (308)
T ss_pred CCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccC
Confidence 999864 5554 56899998644 3 33688999999999999999999999996677888888887776653 3455
Q ss_pred CCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 245 ~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+.+ . ...++|+||||+|++..++.++++++++|++
T Consensus 193 ~~~--~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~i 227 (308)
T TIGR01202 193 PEK--D---------PRRDYRAIYDASGDPSLIDTLVRRLAKGGEI 227 (308)
T ss_pred hhh--c---------cCCCCCEEEECCCCHHHHHHHHHhhhcCcEE
Confidence 432 1 1238999999999977889999999999986
No 63
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1.6e-33 Score=256.70 Aligned_cols=255 Identities=24% Similarity=0.358 Sum_probs=215.5
Q ss_pred eEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCCCE
Q 022819 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (291)
Q Consensus 14 ~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~Gdr 90 (291)
++|+++.++..+++++.+.|.|.++||+||+.++++|++|+..+.+.. .+|.++|||++|+|+++|+++.+|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 478888887669999999999999999999999999999999887754 45789999999999999999999999999
Q ss_pred EE-eecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChh
Q 022819 91 VL-TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (291)
Q Consensus 91 V~-~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~ 169 (291)
|+ ......|++|.+|.++.+++|+...+.++|.. . ......|+|++|+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~ 146 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKY-P-------------DGTITQGGYADHIVVDERFVFKIPEGLDSA 146 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcccccc-c-------------CCCcCCCcceeEEEechhheEECCCCCCHH
Confidence 97 44456899999999999999988765433211 0 001112589999999999999999999999
Q ss_pred hhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCC
Q 022819 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (291)
Q Consensus 170 ~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~ 249 (291)
+++.+.+.+.+||+++.. ..+.++++++|.|+|++|++++++|+.+|+ +++++++++++.+.++++|++.+++.+.
T Consensus 147 ~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~-- 222 (337)
T cd05283 147 AAAPLLCAGITVYSPLKR-NGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD-- 222 (337)
T ss_pred HhhhhhhHHHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc--
Confidence 999999999999998644 468999999999889999999999999999 8999999999999999999988887653
Q ss_pred chHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 250 ~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.++.. . ..+++|++||++|....+..++++++++|++
T Consensus 223 ~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~ 259 (337)
T cd05283 223 PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPGGTL 259 (337)
T ss_pred hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCCCEE
Confidence 33222 1 2348999999999865689999999999875
No 64
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=1.8e-33 Score=254.66 Aligned_cols=245 Identities=29% Similarity=0.382 Sum_probs=210.4
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 13 ~~a~~~~~~~-~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
||++++.+++ +.+++++.+.|+++++||+||+.++++|++|+..+.+.. .+|.++|||++|+|+++|+++..|++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPMPHIPGAEFAGVVEEVGDHVKGVKKGD 80 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCCCCCCCeecccceeEEEEEECCCCCCCCCCC
Confidence 5889987776 458888888888999999999999999999998876532 3477899999999999999999999999
Q ss_pred EEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChh
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~ 169 (291)
+|++.+..+|+.|..|..+++++|+...+ .|+. . .|+|++|+.++.+.++++|++++++
T Consensus 81 ~V~~~~~~~~~~c~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~v~~~~~~~~p~~~~~~ 139 (325)
T cd08264 81 RVVVYNRVFDGTCDMCLSGNEMLCRNGGI--IGVV-S------------------NGGYAEYIVVPEKNLFKIPDSISDE 139 (325)
T ss_pred EEEECCCcCCCCChhhcCCCccccCccce--eecc-C------------------CCceeeEEEcCHHHceeCCCCCCHH
Confidence 99999888999999999999999987543 2221 1 2489999999999999999999999
Q ss_pred hhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 022819 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (291)
Q Consensus 170 ~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~ 248 (291)
+++.+++.+.+||+++.. .+++++++++|+|+ |++|++++++|+.+|+ +++++. +.+.++++|++.+++.++
T Consensus 140 ~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~----~~~~~~~~g~~~~~~~~~- 212 (325)
T cd08264 140 LAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVS----RKDWLKEFGADEVVDYDE- 212 (325)
T ss_pred HhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEe----HHHHHHHhCCCeeecchH-
Confidence 999999999999998754 88999999999987 9999999999999999 788875 236778899988887642
Q ss_pred CchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 249 ~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
..+.+++++ +++|+++|++|+ ..+..++++++++|++
T Consensus 213 ---~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~g~~ 249 (325)
T cd08264 213 ---VEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRGGRL 249 (325)
T ss_pred ---HHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccCCEE
Confidence 345566666 689999999997 6889999999999986
No 65
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=2.8e-33 Score=255.39 Aligned_cols=251 Identities=32% Similarity=0.508 Sum_probs=219.5
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCCCCE
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~Gdr 90 (291)
|||+++.+.++ +.+++.+.|+++++||+||+.++++|+.|...+.+.+ ..|.++|+|++|+|+++|+++..|++||+
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~ 79 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAYHPPLVLGHEFSGTVEEVGSGVDDLAVGDR 79 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCCCCCcccCcceEEEEEEECCCCCcCCCCCE
Confidence 68999998865 9999999999999999999999999999998877654 35788999999999999999999999999
Q ss_pred EEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhh
Q 022819 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (291)
Q Consensus 91 V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~ 170 (291)
|+..+...|..|.+|..+++..|+.... .|.. . .|+|++|+.++.+.++++|+++++++
T Consensus 80 V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~~~~~~~~~lP~~~~~~~ 138 (343)
T cd08236 80 VAVNPLLPCGKCEYCKKGEYSLCSNYDY--IGSR-R------------------DGAFAEYVSVPARNLIKIPDHVDYEE 138 (343)
T ss_pred EEEcCCCCCCCChhHHCcChhhCCCcce--Eecc-c------------------CCcccceEEechHHeEECcCCCCHHH
Confidence 9999888999999999999999988653 2211 1 24999999999999999999999999
Q ss_pred hhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 022819 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (291)
Q Consensus 171 aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~ 250 (291)
++++ ..+.+||.++. ...+.++++|+|+|+|.+|.+++|+|+.+|+..++++.+++++.++++++|++.+++++. .
T Consensus 139 aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--~ 214 (343)
T cd08236 139 AAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--E 214 (343)
T ss_pred HHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc--c
Confidence 9888 47789999875 778899999999988999999999999999944999988899999999999988888765 4
Q ss_pred hHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 251 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 251 ~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
. ...+..+..+ ++|++|||+|....+..++++|+++|++
T Consensus 215 ~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~ 254 (343)
T cd08236 215 D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKV 254 (343)
T ss_pred c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEE
Confidence 4 6667777766 7999999998877889999999999876
No 66
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.5e-33 Score=255.60 Aligned_cols=225 Identities=24% Similarity=0.290 Sum_probs=194.0
Q ss_pred eeEEEEecCCCC-----eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCC
Q 022819 13 CKAAVAWGAGQP-----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT 83 (291)
Q Consensus 13 ~~a~~~~~~~~~-----~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~ 83 (291)
|||+++.+++.| ++++++|.|.|+++||+||+.++++|++|+..+.|.+ .+|.++|||++|+|+++|+++.
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 689999988753 7888999999999999999999999999999887754 3578999999999999999999
Q ss_pred C-CCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEEC
Q 022819 84 E-FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (291)
Q Consensus 84 ~-~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 162 (291)
+ |++||+|+.... .+ |+|++|+.++.+.++++
T Consensus 81 ~~~~vGd~V~~~~~-----------------------------~~------------------g~~a~~~~v~~~~~~~i 113 (324)
T cd08291 81 AQSLIGKRVAFLAG-----------------------------SY------------------GTYAEYAVADAQQCLPL 113 (324)
T ss_pred ccCCCCCEEEecCC-----------------------------CC------------------CcchheeeecHHHeEEC
Confidence 6 999999975411 01 38999999999999999
Q ss_pred CCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEE--cCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCc
Q 022819 163 SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF--GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240 (291)
Q Consensus 163 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~--G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~ 240 (291)
|+++++++++.+++.+.|||. +.+..+. ++++++|+ |+|++|++++|+|+.+|+ +++++++++++++.++++|++
T Consensus 114 P~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~ 190 (324)
T cd08291 114 PDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAE 190 (324)
T ss_pred CCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCc
Confidence 999999999988888889975 4555555 45556665 459999999999999999 899999999999999999999
Q ss_pred eEeCCCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 241 EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 241 ~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.+++++. .++.+.+++++.+ ++|++||++|+. .....+++++++|++
T Consensus 191 ~~i~~~~--~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~ 238 (324)
T cd08291 191 YVLNSSD--PDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLAMPYGSTL 238 (324)
T ss_pred EEEECCC--ccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHhhCCCCEE
Confidence 9998875 6788888888877 899999999984 557789999999985
No 67
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=7e-33 Score=252.55 Aligned_cols=253 Identities=28% Similarity=0.422 Sum_probs=221.6
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccCC----CCcccCcceeEEEEEcCCCCCCCCC
Q 022819 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI----FPRIFGHEASGIVESVGPGVTEFNE 87 (291)
Q Consensus 13 ~~a~~~~~~~-~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~----~p~~~G~e~~G~V~~vG~~~~~~~~ 87 (291)
|||+++.+++ ..+++++++.|.+.++||+||+.++++|++|..++.+... .|.++|+|++|+|+++|+++..|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 6899998876 3499999999999999999999999999999988877652 3668999999999999999999999
Q ss_pred CCEEEeec-ccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 88 GEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 88 GdrV~~~~-~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
||+|+..+ ...|+.|.+|..++.++|+.... .|+. . .|+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~s~~~~~~~~~~~lp~~~ 139 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN--SGYT-V------------------DGTFAEYAIADARYVTPIPDGL 139 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCccc--cccc-c------------------CCcceeEEEeccccEEECCCCC
Confidence 99998776 46799999999999999988654 2321 1 2489999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~ 245 (291)
++++++.++..+.|||+++.. .++++++++||+|+ +.+|.+++++|+.+|+ +++++.+++++.+.++++|++.++++
T Consensus 140 ~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~ 217 (341)
T cd08297 140 SFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDF 217 (341)
T ss_pred CHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcC
Confidence 999999999999999998755 58999999999987 6799999999999999 89999999999999999999999888
Q ss_pred CCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+. .++.+.+.+++.+ ++|++||+.+....+..++++++++|++
T Consensus 218 ~~--~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~ 261 (341)
T cd08297 218 KK--SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTL 261 (341)
T ss_pred CC--ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEE
Confidence 65 5777788888766 8999999888778889999999999876
No 68
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=5.2e-33 Score=253.41 Aligned_cols=242 Identities=27% Similarity=0.434 Sum_probs=203.7
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhccc--------------CCCCcccCcceeEEEEEc
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--------------AIFPRIFGHEASGIVESV 78 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~--------------~~~p~~~G~e~~G~V~~v 78 (291)
|||+++.++ ++++++++.|++.++||+||+.++++|+.|...+.|. ..+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 588998866 6999999999999999999999999999999888762 124778999999999999
Q ss_pred CCCCCC-CCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeecc
Q 022819 79 GPGVTE-FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157 (291)
Q Consensus 79 G~~~~~-~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 157 (291)
|+++++ |++||+|+.++...|+.|..|..++.+ . . .|+|++|+.++.+
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~------------~-~------------------~g~~~~~~~v~~~ 127 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP------------E-A------------------PGGYAEYMLLSEA 127 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc------------C-C------------------CCceeeeEEechH
Confidence 999987 999999999999999999999322100 0 1 2489999999999
Q ss_pred ceEECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc
Q 022819 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (291)
Q Consensus 158 ~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~ 237 (291)
.++++|+++++++++ +...+.+||++ ....+++++++|+|+|+|++|.+++|+|+.+|++.++++++++++.++++++
T Consensus 128 ~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~ 205 (341)
T cd08262 128 LLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAM 205 (341)
T ss_pred HeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHc
Confidence 999999999999887 55688899987 5888999999999998899999999999999996688888899999999999
Q ss_pred CCceEeCCCCCCc--hHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 238 GVTEFLNPNDNNE--PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 238 g~~~~i~~~~~~~--~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
|++.+++++.... .+. .+.+...+ ++|++||++|++..+..++++++++|++
T Consensus 206 g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~ 260 (341)
T cd08262 206 GADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRI 260 (341)
T ss_pred CCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEE
Confidence 9988888754111 222 34444445 8999999999865788899999999875
No 69
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.3e-33 Score=251.16 Aligned_cols=206 Identities=26% Similarity=0.412 Sum_probs=174.7
Q ss_pred ccCcceeEEEEEcCCCCC------CCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCcc
Q 022819 66 IFGHEASGIVESVGPGVT------EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPV 139 (291)
Q Consensus 66 ~~G~e~~G~V~~vG~~~~------~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~ 139 (291)
++|||++|+|+++|++++ +|++||||++.+..+|+.|.+|+.++++.|+...+ +|.....+
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~~~~~----------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK--YGHEALDS----------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh--cCcccccC-----------
Confidence 589999999999999998 89999999999999999999999999999987654 23210000
Q ss_pred ccccCccceeeEEEeecc-ceEECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC
Q 022819 140 YHYCAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA 218 (291)
Q Consensus 140 ~~~~~~g~~~~~~~~~~~-~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~ 218 (291)
.....|+|+||+.++.. .++++|+++++++++.+++.+.|+|+++. .....++++|||+|+|++|++++|+|+.+|+
T Consensus 68 -~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~ 145 (280)
T TIGR03366 68 -GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGAGMLGLTAAAAAAAAGA 145 (280)
T ss_pred -CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 00012599999999997 79999999999999999989999999764 4455699999999999999999999999999
Q ss_pred CeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 219 SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 219 ~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.+|++++++++|+++++++|++.++++++ ..+.+++.+.+ ++|++||++|.+..++.++++++++|++
T Consensus 146 ~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~i 214 (280)
T TIGR03366 146 ARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTA 214 (280)
T ss_pred CEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEE
Confidence 55999999999999999999998887642 24556667766 8999999999888899999999999986
No 70
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1e-32 Score=249.65 Aligned_cols=248 Identities=33% Similarity=0.523 Sum_probs=215.8
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
|+|+++.++++++.++++|.|.+.++||+|+++++++|++|+..+.|.. ..|.++|+|++|+|+++|+++..|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 5899998766679999999999999999999999999999999887754 4567899999999999999999999999
Q ss_pred EEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChh
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~ 169 (291)
+|+.+....|+.|.+|..+.++.|+.. ..+|.. . .|+|++|+.++...++++|++++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~------------------~g~~~~~~~v~~~~~~~ip~~~~~~ 139 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNR--AEYGEE-V------------------DGGFAEYVKVPERSLVKLPDNVSDE 139 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCc--cccccc-c------------------CCeeeeEEEechhheEECCCCCCHH
Confidence 999999999999999999999999875 334432 1 2489999999999999999999999
Q ss_pred hhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 022819 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (291)
Q Consensus 170 ~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~ 248 (291)
+++.+++.+.+||+++.. ..+.++++++|+|+ |++|++++++++.+|. +++++.+++++.+.+++++.+.+++.+
T Consensus 140 ~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~-- 215 (332)
T cd08259 140 SAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS-- 215 (332)
T ss_pred HHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH--
Confidence 999999999999998766 88999999999987 9999999999999999 888888888999999888887777553
Q ss_pred CchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 249 ~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
. +.+.+.+.. ++|++++++|.. ....+++.++++|++
T Consensus 216 -~-~~~~~~~~~--~~d~v~~~~g~~-~~~~~~~~~~~~g~~ 252 (332)
T cd08259 216 -K-FSEDVKKLG--GADVVIELVGSP-TIEESLRSLNKGGRL 252 (332)
T ss_pred -H-HHHHHHhcc--CCCEEEECCChH-HHHHHHHHhhcCCEE
Confidence 2 555555543 799999999984 578899999988875
No 71
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.2e-32 Score=249.38 Aligned_cols=253 Identities=25% Similarity=0.410 Sum_probs=218.8
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
|||+++.+++.+ +.+++.+.|.+.+++|+||+.++++|++|...+.|.. ..|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 578888844332 7788888888999999999999999999998887754 2477899999999999999999999
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||+|++.+..+|+.|.+|..++++.|+...+ .|.. . .|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~-~------------------~g~~~~~~~~~~~~~~~~p~~~ 139 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI--LGEH-V------------------DGGYAEYVAVPARNLLPIPDNL 139 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc--cccc-c------------------CcceeEEEEechHHceeCCCCC
Confidence 99999999999999999999999999987543 2321 1 2489999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~ 245 (291)
++++++.+++.+.++|+++.+..++.++++++|+|+ +.+|++++++++.+|+ +++.+++++++.+.++.++.+..++.
T Consensus 140 ~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~ 218 (342)
T cd08266 140 SFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDY 218 (342)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEec
Confidence 999999999999999999888889999999999987 6999999999999999 88999899999999988888777766
Q ss_pred CCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.. .++.+.+.+.+.+ ++|++++++|. ..+..+++.++++|++
T Consensus 219 ~~--~~~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~G~~ 261 (342)
T cd08266 219 RK--EDFVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARGGRL 261 (342)
T ss_pred CC--hHHHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcCCEE
Confidence 54 5666667776665 89999999997 5788899999999875
No 72
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=8.3e-33 Score=249.80 Aligned_cols=225 Identities=21% Similarity=0.290 Sum_probs=198.9
Q ss_pred eeEEEEecCCCC---eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCC
Q 022819 13 CKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF 85 (291)
Q Consensus 13 ~~a~~~~~~~~~---~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~ 85 (291)
|||+++.+++.| ++++++|.|.+.++||+|||.++++|+.|+..+.|.. ..|.++|||++|+|+++|+++.+|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 589999887654 7889999999999999999999999999998887754 346789999999999999999999
Q ss_pred CCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCC
Q 022819 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (291)
Q Consensus 86 ~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~ 165 (291)
++||+|+.... .|+|++|+.++...++++|++
T Consensus 81 ~~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~ip~~ 112 (324)
T cd08292 81 QVGQRVAVAPV------------------------------------------------HGTWAEYFVAPADGLVPLPDG 112 (324)
T ss_pred CCCCEEEeccC------------------------------------------------CCcceeEEEEchHHeEECCCC
Confidence 99999976521 148999999999999999999
Q ss_pred CChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeC
Q 022819 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (291)
Q Consensus 166 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~ 244 (291)
+++++++.+++.+.++|+++ +..++.++++|||+|+ |.+|++++|+|+.+|+ .++++..++++.+.++++|++.+++
T Consensus 113 ~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (324)
T cd08292 113 ISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVS 190 (324)
T ss_pred CCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEc
Confidence 99999999988889999875 5688999999999986 9999999999999999 8888888888888888899988888
Q ss_pred CCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 245 ~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+++ .++...+.+++.+ ++|++||++|+ ..+..++++++++|++
T Consensus 191 ~~~--~~~~~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~g~~ 234 (324)
T cd08292 191 TEQ--PGWQDKVREAAGGAPISVALDSVGG-KLAGELLSLLGEGGTL 234 (324)
T ss_pred CCC--chHHHHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCCcEE
Confidence 765 6788888888887 99999999998 4678999999999886
No 73
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.8e-32 Score=248.85 Aligned_cols=250 Identities=33% Similarity=0.496 Sum_probs=216.5
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCCCCE
Q 022819 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (291)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~Gdr 90 (291)
|||+++.++++ +++.+.|.|.+.++||+||+.++++|+.|...+.|.. .+|.++|+|++|+|+++|+++.+|++||+
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~ 79 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAAPPLVPGHEFAGVVVAVGSKVTGFKVGDR 79 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCE
Confidence 68999998874 9999999999999999999999999999999887765 46779999999999999999999999999
Q ss_pred EEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhh
Q 022819 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (291)
Q Consensus 91 V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~ 170 (291)
|+..+..+|+.|..|..+++++|..... .|.. .+ |+|++|+.++.+.++++|+++++.+
T Consensus 80 V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~lP~~~~~~~ 138 (334)
T cd08234 80 VAVDPNIYCGECFYCRRGRPNLCENLTA--VGVT-RN------------------GGFAEYVVVPAKQVYKIPDNLSFEE 138 (334)
T ss_pred EEEcCCcCCCCCccccCcChhhCCCcce--eccC-CC------------------CcceeEEEecHHHcEECcCCCCHHH
Confidence 9998888999999999999999988763 2211 12 4899999999999999999999999
Q ss_pred hhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 022819 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (291)
Q Consensus 171 aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~ 250 (291)
++.+ ..+.++++++ +..++.++++++|+|+|.+|.+++++|+.+|+..++++++++++.+.++++|++.+++.+. .
T Consensus 139 aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~ 214 (334)
T cd08234 139 AALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR--E 214 (334)
T ss_pred Hhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC--C
Confidence 8876 6778888887 7889999999999988999999999999999944888989999999999999888887754 3
Q ss_pred hHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 251 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 251 ~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++... +.+.+ ++|++||++|....+..++++++++|++
T Consensus 215 ~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~ 253 (334)
T cd08234 215 DPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTV 253 (334)
T ss_pred CHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEE
Confidence 33333 33344 8999999998777889999999999876
No 74
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.1e-32 Score=249.53 Aligned_cols=221 Identities=22% Similarity=0.264 Sum_probs=190.0
Q ss_pred eeeEEEEecC--CCC----eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccCCCCcccCcceeEEEEEcCCCCCCC
Q 022819 12 TCKAAVAWGA--GQP----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEF 85 (291)
Q Consensus 12 ~~~a~~~~~~--~~~----~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~ 85 (291)
+|++|++.++ +.+ +++++.|.|+|+++||+|||++++||+.|..........|.++|+|++|+|++. +++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~~~~~p~v~G~e~~G~V~~~---~~~~ 78 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKRLNEGDTMIGTQVAKVIESK---NSKF 78 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccccCCCCCcEecceEEEEEecC---CCCC
Confidence 6899999983 333 889999999999999999999999999887643322246889999999999963 4579
Q ss_pred CCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeecc---ceEEC
Q 022819 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG---CAVKV 162 (291)
Q Consensus 86 ~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~i 162 (291)
++||||+.. ++|++|..++.+ .++++
T Consensus 79 ~~Gd~V~~~---------------------------------------------------~~~~~~~~~~~~~~~~~~~i 107 (329)
T cd08294 79 PVGTIVVAS---------------------------------------------------FGWRTHTVSDGKDQPDLYKL 107 (329)
T ss_pred CCCCEEEee---------------------------------------------------CCeeeEEEECCccccceEEC
Confidence 999999542 268899999999 99999
Q ss_pred CCCCC--h---hhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 022819 163 SSIAP--L---EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (291)
Q Consensus 163 p~~~~--~---~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~ 236 (291)
|++++ + ..+++++++++|||+++.+..+++++++|||+|+ |++|.+++|+|+.+|+ +|+++++++++.+++++
T Consensus 108 P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~ 186 (329)
T cd08294 108 PADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKE 186 (329)
T ss_pred CccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 99987 2 2334677899999999888899999999999985 9999999999999999 89999999999999999
Q ss_pred cCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 237 ~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+|++.++++++ .++.+.+++++.+++|++||++|+ ..+..++++++++|++
T Consensus 187 ~Ga~~vi~~~~--~~~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~G~i 237 (329)
T cd08294 187 LGFDAVFNYKT--VSLEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDFGRV 237 (329)
T ss_pred cCCCEEEeCCC--ccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccCCEE
Confidence 99999998875 677788888776689999999998 6789999999999986
No 75
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1.1e-32 Score=251.60 Aligned_cols=213 Identities=18% Similarity=0.236 Sum_probs=181.4
Q ss_pred eEEEEeecCCCC-CCcEEEEEeEeeCChhhhhhhc---cc---CCCCcccCcceeEEEEEcCCCCCCCCCCCEEEeeccc
Q 022819 25 LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWE---TQ---AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIG 97 (291)
Q Consensus 25 ~~~~~~~~~~~~-~~eVlVkv~~~~i~~~D~~~~~---g~---~~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV~~~~~~ 97 (291)
+++++.|.|.|. ++||||||.+++||+.|..... +. ..+|.++|||++|+|+++|+++++|++||||+...
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-- 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence 889999999875 9999999999999999863322 21 14578899999999999999999999999995420
Q ss_pred CCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhh----hhh
Q 022819 98 ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK----ICL 173 (291)
Q Consensus 98 ~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~----aa~ 173 (291)
++|++|+.++.+.++++|+++++.+ ++.
T Consensus 101 ------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~ 132 (345)
T cd08293 101 ------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGA 132 (345)
T ss_pred ------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhhh
Confidence 2799999999999999999864332 455
Q ss_pred hhhhhhhhHhHHHhhcCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCceEeCCCCCC
Q 022819 174 LSCGLSAGLGAAWNVADISKG--STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNN 249 (291)
Q Consensus 174 ~~~~~~ta~~~l~~~~~~~~~--~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~g~~~~i~~~~~~ 249 (291)
++.++.|||+++.+..+++++ ++|||+|+ |++|++++|+|+.+|+.+|+++++++++.+.+++ +|++.++++++
T Consensus 133 ~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~-- 210 (345)
T cd08293 133 VGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT-- 210 (345)
T ss_pred cCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--
Confidence 667899999998888888876 99999987 9999999999999998669999999999998876 99999998875
Q ss_pred chHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 250 ~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.++.+.+++++++++|++||++|+. .+..++++|+++|++
T Consensus 211 ~~~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~G~i 250 (345)
T cd08293 211 DNVAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNENSHI 250 (345)
T ss_pred CCHHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccCCEE
Confidence 6788888887766899999999984 579999999999986
No 76
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.8e-32 Score=245.58 Aligned_cols=252 Identities=31% Similarity=0.493 Sum_probs=215.3
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCC
Q 022819 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (291)
Q Consensus 13 ~~a~~~~~~~-~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~G 88 (291)
||+++..++. +.+++++++.|.+.++||+||+.++++|++|...+.+.. ..|.++|+|++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 5789988755 349999999999999999999999999999998877754 457889999999999999999999999
Q ss_pred CEEEeecc-cCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCC
Q 022819 89 EHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (291)
Q Consensus 89 drV~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~ 167 (291)
|+|+..+. ..|+.|..|..+.++.|+.-.. +|.. . .|+|++|+.++.+.++++|++++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~v~~~~~~~lp~~~~ 139 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKG--IGTQ-A------------------DGGFAEYVLVPEESLHELPENLS 139 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCce--eeec-C------------------CCceEEEEEcchHHeEECcCCCC
Confidence 99998875 6899999999998888876321 2221 1 24999999999999999999999
Q ss_pred hhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHHcCCceEeCC
Q 022819 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD--TNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 168 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~--~~~~~~~~a~~~g~~~~i~~ 245 (291)
+++++ +...+.++|+++....+++++++|+|.|+|.+|.+++|+|+.+|+ +|+++. +++++.++++++|++.+ ++
T Consensus 140 ~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~ 216 (306)
T cd08258 140 LEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NG 216 (306)
T ss_pred HHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CC
Confidence 99887 666888999998888999999999998889999999999999999 777763 35568888899999777 76
Q ss_pred CCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+. .++.+.+.+++.+ ++|.+||++|....+...++.|+++|++
T Consensus 217 ~~--~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~ 260 (306)
T cd08258 217 GE--EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRI 260 (306)
T ss_pred Cc--CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEE
Confidence 54 6777788887766 8999999998767889999999999986
No 77
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=2e-32 Score=248.30 Aligned_cols=248 Identities=29% Similarity=0.443 Sum_probs=214.5
Q ss_pred eEEEEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCCCCE
Q 022819 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (291)
Q Consensus 14 ~a~~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~Gdr 90 (291)
||+++.+++..+++++.|.|.+.+++|+||+.++++|++|...+.+.. .+|.++|+|++|+|+++|+++++|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 588999886669999999999999999999999999999998887754 45678999999999999999999999999
Q ss_pred EEeecc-cCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChh
Q 022819 91 VLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (291)
Q Consensus 91 V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~ 169 (291)
|++.+. .+|+.|.+|.++++++|++..+...+ .+ |+|++|+.++.+.++++|+++++.
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------g~~~~~~~v~~~~~~~~p~~~~~~ 139 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYT---TQ------------------GGYAEYMVADAEYTVLLPDGLPLA 139 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCccccCcc---cC------------------CccccEEEEcHHHeEECCCCCCHH
Confidence 988665 67999999999999999997653221 12 489999999999999999999999
Q ss_pred hhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCC
Q 022819 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (291)
Q Consensus 170 ~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~ 249 (291)
+++.+.+.+.+||.++.. ..+.++++|+|+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++...
T Consensus 140 ~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-- 215 (330)
T cd08245 140 QAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA-- 215 (330)
T ss_pred HhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC--
Confidence 999999999999998754 788999999999888899999999999999 8999999999999999999888877653
Q ss_pred chHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 250 ~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
...... ..+++|+++|+++.......+++.++++|++
T Consensus 216 ~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~ 252 (330)
T cd08245 216 ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRGGRI 252 (330)
T ss_pred cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccCCEE
Confidence 222222 2247999999988777889999999999875
No 78
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.3e-32 Score=247.82 Aligned_cols=244 Identities=29% Similarity=0.440 Sum_probs=213.7
Q ss_pred eeEEEEecCCC----CeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCC
Q 022819 13 CKAAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEF 85 (291)
Q Consensus 13 ~~a~~~~~~~~----~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~ 85 (291)
|+++++.+++. ++.+++.+.|.++++||+||+.++++|++|+..+.|.. ..|.++|||++|+|+++|+++.+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 68999998874 58888888888999999999999999999999887754 456799999999999999999999
Q ss_pred CCCCEEEeecc-cCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCC
Q 022819 86 NEGEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (291)
Q Consensus 86 ~~GdrV~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~ 164 (291)
++||+|++.+. .+|+.|..|..+.+++|+...+. |+. .+ |+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~------------------g~~~~~~~~~~~~~~~lp~ 139 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT--GYT-VD------------------GGYAEYMVADERFAYPIPE 139 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc--ccc-cC------------------CceEEEEEecchhEEECCC
Confidence 99999977654 57899999999999999877642 321 12 4899999999999999999
Q ss_pred CCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeC
Q 022819 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (291)
Q Consensus 165 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~ 244 (291)
++++.+++.+.+.+.+||+++ +..+++++++++|+|+|++|++++++++.+|+ +++++.+++++++.++++|++.+++
T Consensus 140 ~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 217 (329)
T cd08298 140 DYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGD 217 (329)
T ss_pred CCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEec
Confidence 999999999999999999987 88999999999999999999999999999998 8999999999999999999988777
Q ss_pred CCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 245 ~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.+. . ...++|+++++.+....++.++++++++|++
T Consensus 218 ~~~--~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~ 252 (329)
T cd08298 218 SDD--L---------PPEPLDAAIIFAPVGALVPAALRAVKKGGRV 252 (329)
T ss_pred cCc--c---------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEE
Confidence 653 1 1237999999877777899999999999876
No 79
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=2.6e-32 Score=248.10 Aligned_cols=228 Identities=19% Similarity=0.248 Sum_probs=196.7
Q ss_pred eEEEEecC---CCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCC
Q 022819 14 KAAVAWGA---GQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEF 85 (291)
Q Consensus 14 ~a~~~~~~---~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~ 85 (291)
|||++.++ +.+ ++++++|.|+|+++||+|||+++++|+.|..++.+.. .+|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57788876 444 7888999999999999999999999999998877654 456789999999999999999999
Q ss_pred CCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCC
Q 022819 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (291)
Q Consensus 86 ~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~ 165 (291)
++||+|+.... .. . .|+|++|+.++.+.++++|++
T Consensus 81 ~~Gd~V~~~~~--------------------------~~-~------------------~g~~~~~~~v~~~~~~~ip~~ 115 (336)
T TIGR02817 81 KPGDEVWYAGD--------------------------ID-R------------------PGSNAEFHLVDERIVGHKPKS 115 (336)
T ss_pred CCCCEEEEcCC--------------------------CC-C------------------CCcccceEEEcHHHcccCCCC
Confidence 99999965310 00 1 148999999999999999999
Q ss_pred CChhhhhhhhhhhhhhHhHHHhhcCCCC-----CCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHcC
Q 022819 166 APLEKICLLSCGLSAGLGAAWNVADISK-----GSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFG 238 (291)
Q Consensus 166 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~vlV~G~-g~~G~~~i~~a~~~-g~~~vi~~~~~~~~~~~a~~~g 238 (291)
+++++++.+++.+.|||+++.+..++.+ +++|||+|+ |++|++++|+|+.+ |+ +|+++.+++++.+.++++|
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g 194 (336)
T TIGR02817 116 LSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELG 194 (336)
T ss_pred CCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcC
Confidence 9999999999999999999888888877 999999986 99999999999998 99 8999989999999999999
Q ss_pred CceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 239 ~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++.+++++ .++...+++...+++|+++|++++...+...+++++++|++
T Consensus 195 ~~~~~~~~---~~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~ 243 (336)
T TIGR02817 195 AHHVIDHS---KPLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRF 243 (336)
T ss_pred CCEEEECC---CCHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEE
Confidence 99988764 35666777754448999999987767889999999999986
No 80
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=3.6e-32 Score=247.64 Aligned_cols=249 Identities=30% Similarity=0.479 Sum_probs=206.6
Q ss_pred EEecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhc-ccC-----CCCcccCcceeEEEEEcCCCCCCCCCCCE
Q 022819 17 VAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-TQA-----IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (291)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~-g~~-----~~p~~~G~e~~G~V~~vG~~~~~~~~Gdr 90 (291)
+++++++ +++++.|+|.++++||+||+.++++|++|...+. +.. .+|.++|+|++|+|+++|+++.+|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 5677755 9999999999999999999999999999987763 321 35778999999999999999999999999
Q ss_pred EEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhh
Q 022819 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (291)
Q Consensus 91 V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~ 170 (291)
|++.+...|+.|.+|..++.+.|+...+ .|....+ .+..|+|++|+.++.+.++++|+++++++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~--------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~~ 144 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF--LGSAMRF--------------PHVQGGFREYLVVDASQCVPLPDGLSLRR 144 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc--eeecccc--------------CCCCCceeeEEEechHHeEECcCCCCHHH
Confidence 9999999999999999999999997543 2211000 00125999999999999999999999999
Q ss_pred hhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 022819 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (291)
Q Consensus 171 aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~ 250 (291)
|+. ...+.++|+++.+...+ ++++|||.|+|.+|.+++|+|+.+|+.+++++++++++.++++++|++.++++++ .
T Consensus 145 aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--~ 220 (339)
T cd08232 145 AAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--D 220 (339)
T ss_pred hhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--h
Confidence 876 46888999887666666 8999999988999999999999999867899988899999999999988888764 3
Q ss_pred hHHHHHHHHh-cC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 251 PVQQVIKRIT-DG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 251 ~~~~~~~~~~-~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++ .++. .. ++|++||++|....+...++.|+++|++
T Consensus 221 ~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~ 258 (339)
T cd08232 221 PL----AAYAADKGDFDVVFEASGAPAALASALRVVRPGGTV 258 (339)
T ss_pred hh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 32 2222 22 6999999999767789999999999886
No 81
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=1.3e-32 Score=234.96 Aligned_cols=231 Identities=23% Similarity=0.314 Sum_probs=195.3
Q ss_pred cceeeeEEEEecCCCC---eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCC
Q 022819 9 QVITCKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPG 81 (291)
Q Consensus 9 ~~~~~~a~~~~~~~~~---~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~ 81 (291)
++...|++++...+.| ++++++++|....++|+||.+|+.|||+|+..++|.| .+|.+-|+|++|+|+.+|++
T Consensus 16 ~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~ 95 (354)
T KOG0025|consen 16 MPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSN 95 (354)
T ss_pred cccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCC
Confidence 6678899999999888 8899999999888889999999999999999999999 67889999999999999999
Q ss_pred CCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEE
Q 022819 82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (291)
Q Consensus 82 ~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 161 (291)
+.+|++||+|+....+ .|+|++|.+.+++.+++
T Consensus 96 vkgfk~Gd~VIp~~a~-----------------------------------------------lGtW~t~~v~~e~~Li~ 128 (354)
T KOG0025|consen 96 VKGFKPGDWVIPLSAN-----------------------------------------------LGTWRTEAVFSESDLIK 128 (354)
T ss_pred cCccCCCCeEeecCCC-----------------------------------------------CccceeeEeecccceEE
Confidence 9999999999776442 36999999999999999
Q ss_pred CCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HH
Q 022819 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KA 236 (291)
Q Consensus 162 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~ 236 (291)
++..++++.||++.++-+|||..|.+..++.+||+|+-.|+ +.+|.+++|+|+++|+ +.|.+.++....+.+ +.
T Consensus 129 vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~ 207 (354)
T KOG0025|consen 129 VDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKS 207 (354)
T ss_pred cCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHH
Confidence 99999999999999999999999999999999999988888 9999999999999999 666666766555444 56
Q ss_pred cCCceEeCCCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 237 FGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 237 ~g~~~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+|+++|+.-.+ -.-.+..+..... ++...|+|+|+. ......+.|.+||++
T Consensus 208 lGA~~ViTeee--l~~~~~~k~~~~~~~prLalNcVGGk-sa~~iar~L~~Ggtm 259 (354)
T KOG0025|consen 208 LGATEVITEEE--LRDRKMKKFKGDNPRPRLALNCVGGK-SATEIARYLERGGTM 259 (354)
T ss_pred cCCceEecHHH--hcchhhhhhhccCCCceEEEeccCch-hHHHHHHHHhcCceE
Confidence 89999985432 1111112222233 788999999995 456777888888865
No 82
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=5.3e-32 Score=246.93 Aligned_cols=246 Identities=30% Similarity=0.451 Sum_probs=211.1
Q ss_pred ecCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC------CCCcccCcceeEEEEEcCCCCCCCCCCCEEE
Q 022819 19 WGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFNEGEHVL 92 (291)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV~ 92 (291)
++|+.++++++.|.|.|.++||+||+.++++|+.|...+.+.. .+|.++|+|++|+|+++|+++++|++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 4678889999999999999999999999999999988754431 3467899999999999999999999999999
Q ss_pred eecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhhhh
Q 022819 93 TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIC 172 (291)
Q Consensus 93 ~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa 172 (291)
..+...|+.|..|..+..++|+...+. |.. .. |+|++|+.++.+.++++|++++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~~~~~a- 142 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKIF--GVD-TD------------------GCFAEYAVVPAQNIWKNPKSIPPEYA- 142 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcceE--eec-CC------------------CcceeEEEeehHHcEECcCCCChHhh-
Confidence 999999999999999999999987542 221 12 48999999999999999999998655
Q ss_pred hhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchH
Q 022819 173 LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV 252 (291)
Q Consensus 173 ~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~ 252 (291)
+++..+.++++++ .....++++++|.|+|++|.+++|+|+.+|++.|+++++++++.++++++|++.++++.. .++
T Consensus 143 ~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~ 218 (340)
T TIGR00692 143 TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDV 218 (340)
T ss_pred hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cCH
Confidence 4666888888865 345678999999888999999999999999944888888899999999999988888765 677
Q ss_pred HHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 253 QQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 253 ~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.+.+.+++.+ ++|++||++|+...+...+++|+++|++
T Consensus 219 ~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~ 257 (340)
T TIGR00692 219 VKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRV 257 (340)
T ss_pred HHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEE
Confidence 7888887766 8999999999877889999999999875
No 83
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=6.4e-32 Score=244.95 Aligned_cols=209 Identities=19% Similarity=0.258 Sum_probs=178.9
Q ss_pred eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccCCCCcccCcceeEEEEEcCCCCCCCCCCCEEEeecccCCCCCcc
Q 022819 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQ 104 (291)
Q Consensus 25 ~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV~~~~~~~~~~c~~ 104 (291)
+++++.|.|.|++|||||||.++++|+.+..........|.++|.|++|+|+++|+ +|++||||+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~---------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRVAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS---------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhcccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe----------
Confidence 88999999999999999999999999976543322224578999999999999874 59999999543
Q ss_pred ccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEEC----CCCCChhhh-hhhhhhhh
Q 022819 105 CKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV----SSIAPLEKI-CLLSCGLS 179 (291)
Q Consensus 105 ~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i----p~~~~~~~a-a~~~~~~~ 179 (291)
++|++|+.++.+.+.++ |++++++++ +++++++.
T Consensus 86 -----------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~ 124 (325)
T TIGR02825 86 -----------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGL 124 (325)
T ss_pred -----------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHH
Confidence 26888999998888777 999999987 67888999
Q ss_pred hhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHH
Q 022819 180 AGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR 258 (291)
Q Consensus 180 ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~ 258 (291)
|||+++.+..+++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|++.++++++ ..++.+.+++
T Consensus 125 TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~ 202 (325)
T TIGR02825 125 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT-VKSLEETLKK 202 (325)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc-cccHHHHHHH
Confidence 99999889999999999999986 9999999999999999 8999999999999999999999998864 1245555666
Q ss_pred HhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 259 ITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 259 ~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.+++++|++||++|+ ..+..++++++++|++
T Consensus 203 ~~~~gvdvv~d~~G~-~~~~~~~~~l~~~G~i 233 (325)
T TIGR02825 203 ASPDGYDCYFDNVGG-EFSNTVIGQMKKFGRI 233 (325)
T ss_pred hCCCCeEEEEECCCH-HHHHHHHHHhCcCcEE
Confidence 554589999999998 4679999999999986
No 84
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-31 Score=245.67 Aligned_cols=228 Identities=23% Similarity=0.303 Sum_probs=189.4
Q ss_pred cceeeeEEEEecCC--CC----eEEEEe---ecC-CCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCc--ceeE
Q 022819 9 QVITCKAAVAWGAG--QP----LVVEEV---EVN-PPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGH--EASG 73 (291)
Q Consensus 9 ~~~~~~a~~~~~~~--~~----~~~~~~---~~~-~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~--e~~G 73 (291)
..+++|+|++-+.. -| |++.+. +.| ++++||||||+.++++||.|...+.+.. ..|.++|+ |++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G 84 (348)
T PLN03154 5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFG 84 (348)
T ss_pred ccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeE
Confidence 45667999996532 11 777773 555 3579999999999999999886543311 35788998 8899
Q ss_pred EEEEcCCCCCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEE
Q 022819 74 IVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTV 153 (291)
Q Consensus 74 ~V~~vG~~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 153 (291)
+|+.+|+++++|++||+|+.. |+|++|..
T Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------~~~aey~~ 113 (348)
T PLN03154 85 VSKVVDSDDPNFKPGDLISGI---------------------------------------------------TGWEEYSL 113 (348)
T ss_pred EEEEEecCCCCCCCCCEEEec---------------------------------------------------CCcEEEEE
Confidence 999999999999999999432 37999988
Q ss_pred eecc--ceEE--CCCCCChh-hhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 154 VHSG--CAVK--VSSIAPLE-KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 154 ~~~~--~~~~--ip~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
++.. ++++ +|++++++ +++.+++++.|||+++.+..+++++++|||+|+ |++|++++|+|+.+|+ +|++++++
T Consensus 114 v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~ 192 (348)
T PLN03154 114 IRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGS 192 (348)
T ss_pred EeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCC
Confidence 8874 3544 59999986 688899999999999888889999999999987 9999999999999999 89999999
Q ss_pred hhhHHHHH-HcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 228 PEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 228 ~~~~~~a~-~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++++++++ ++|++.++++++ ..++.+.+++.+++++|++||++|+ ..+..++++++++|++
T Consensus 193 ~~k~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~G~i 254 (348)
T PLN03154 193 SQKVDLLKNKLGFDEAFNYKE-EPDLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIHGRI 254 (348)
T ss_pred HHHHHHHHHhcCCCEEEECCC-cccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccCCEE
Confidence 99999987 799999998863 1367777887766689999999998 5889999999999986
No 85
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.2e-31 Score=244.38 Aligned_cols=225 Identities=22% Similarity=0.287 Sum_probs=189.2
Q ss_pred eeeEEEEecCCC-CeEEEEeec----CCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcce--eEEEEEcCC
Q 022819 12 TCKAAVAWGAGQ-PLVVEEVEV----NPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEA--SGIVESVGP 80 (291)
Q Consensus 12 ~~~a~~~~~~~~-~~~~~~~~~----~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~--~G~V~~vG~ 80 (291)
-.|+|+...|.. .|++++.++ |+|+++||||||++++||+.|++.+.|.. ..|.++|++. .|.+..+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~ 86 (338)
T cd08295 7 ILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS 86 (338)
T ss_pred EEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence 345566444432 288898887 88999999999999999999999887743 3577889754 455556788
Q ss_pred CCCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeec-cce
Q 022819 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCA 159 (291)
Q Consensus 81 ~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~ 159 (291)
.+++|++||+|+.+ |+|+||+.++. +.+
T Consensus 87 ~v~~~~vGd~V~~~---------------------------------------------------g~~aey~~v~~~~~~ 115 (338)
T cd08295 87 GNPDFKVGDLVWGF---------------------------------------------------TGWEEYSLIPRGQDL 115 (338)
T ss_pred CCCCCCCCCEEEec---------------------------------------------------CCceeEEEecchhce
Confidence 88889999999532 38999999999 799
Q ss_pred EECC-CCCChh-hhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 022819 160 VKVS-SIAPLE-KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (291)
Q Consensus 160 ~~ip-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~ 236 (291)
+++| +.+++. +++.+++++.|||+++.+..+++++++|||+|+ |++|.+++|+|+.+|+ +|+++++++++.+.+++
T Consensus 116 ~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~ 194 (338)
T cd08295 116 RKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKN 194 (338)
T ss_pred eecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 9995 678876 788899999999999888899999999999987 9999999999999999 89999899999999998
Q ss_pred -cCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 237 -FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 237 -~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+|++.++++++ +.++.+.+++.+++++|++||++|+ ..+..++++++++|++
T Consensus 195 ~lGa~~vi~~~~-~~~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~G~i 247 (338)
T cd08295 195 KLGFDDAFNYKE-EPDLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLHGRI 247 (338)
T ss_pred hcCCceeEEcCC-cccHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccCcEE
Confidence 99999998653 1467777777765689999999998 6789999999999986
No 86
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=2.2e-31 Score=242.60 Aligned_cols=227 Identities=25% Similarity=0.348 Sum_probs=196.7
Q ss_pred eeEEEEecCCCC---eEEEEeecCCCCC-CcEEEEEeEeeCChhhhhhhcccCC--------CCcccCcceeEEEEEcCC
Q 022819 13 CKAAVAWGAGQP---LVVEEVEVNPPQP-EEIRIKVVCTSLCRSDITAWETQAI--------FPRIFGHEASGIVESVGP 80 (291)
Q Consensus 13 ~~a~~~~~~~~~---~~~~~~~~~~~~~-~eVlVkv~~~~i~~~D~~~~~g~~~--------~p~~~G~e~~G~V~~vG~ 80 (291)
|||+++.+++.| +.+++.|.|.|.+ +||+||+.++++|+.|...+.|... .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 689999998876 8999999999888 9999999999999999998877642 566899999999999999
Q ss_pred CCCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceE
Q 022819 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (291)
Q Consensus 81 ~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 160 (291)
++..|++||+|+.... . .|+|++|+.++.+.++
T Consensus 81 ~v~~~~~Gd~V~~~~~-----------------------------~------------------~g~~~~~~~v~~~~~~ 113 (341)
T cd08290 81 GVKSLKPGDWVIPLRP-----------------------------G------------------LGTWRTHAVVPADDLI 113 (341)
T ss_pred CCCCCCCCCEEEecCC-----------------------------C------------------CccchheEeccHHHeE
Confidence 9999999999976521 0 1489999999999999
Q ss_pred ECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHHH
Q 022819 161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----EKCEKAK 235 (291)
Q Consensus 161 ~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~----~~~~~a~ 235 (291)
++|+++++++++.+++.+.|||+++.....+.++++|||+|+ |++|++++|+|+++|+ +++++..++ ++.+.++
T Consensus 114 ~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~ 192 (341)
T cd08290 114 KVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLK 192 (341)
T ss_pred eCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHH
Confidence 999999999999999999999999877788999999999987 9999999999999999 777776655 6788889
Q ss_pred HcCCceEeCCCCCCc---hHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 236 AFGVTEFLNPNDNNE---PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 236 ~~g~~~~i~~~~~~~---~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++|++.+++++. . ++...+..++.+++|.+||++|+. .+..++++++++|++
T Consensus 193 ~~g~~~~~~~~~--~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~ 247 (341)
T cd08290 193 ALGADHVLTEEE--LRSLLATELLKSAPGGRPKLALNCVGGK-SATELARLLSPGGTM 247 (341)
T ss_pred hcCCCEEEeCcc--cccccHHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCCCEE
Confidence 999999888754 3 666777776655899999999985 567789999999875
No 87
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=6.5e-31 Score=238.11 Aligned_cols=228 Identities=21% Similarity=0.272 Sum_probs=202.0
Q ss_pred eeeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 12 TCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 12 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
+||++++.+++.+ +++++++.|.++++||+||+.++++|++|+....+.+ ..|.++|+|++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 4799999987765 8899999999999999999999999999998877754 3567899999999999999999999
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||+|+.... . .|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~-----------------------------~------------------~g~~~~~v~v~~~~~~~lp~~~ 113 (327)
T PRK10754 81 VGDRVVYAQS-----------------------------A------------------LGAYSSVHNVPADKAAILPDAI 113 (327)
T ss_pred CCCEEEECCC-----------------------------C------------------CcceeeEEEcCHHHceeCCCCC
Confidence 9999964211 0 1389999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~ 245 (291)
++++++.+++.+.++|.++.+..++.++++++|+|+ |.+|.+++++|+.+|+ ++++++.++++++.++++|++.+++.
T Consensus 114 ~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 192 (327)
T PRK10754 114 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINY 192 (327)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcC
Confidence 999999988899999998888889999999999975 9999999999999999 88999899999999999999888877
Q ss_pred CCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+. .++.+.+++++.+ ++|++||++|+ ..+...++.++++|++
T Consensus 193 ~~--~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~ 235 (327)
T PRK10754 193 RE--ENIVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRRGLM 235 (327)
T ss_pred CC--CcHHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccCCEE
Confidence 65 6788888888887 89999999998 5778899999999876
No 88
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.8e-31 Score=240.02 Aligned_cols=241 Identities=28% Similarity=0.341 Sum_probs=195.5
Q ss_pred eeEEEEecCCCC--eEEEE-eecCCCCCCcEEEEEeEeeCChhhhhhhcccC-----------------------CCCcc
Q 022819 13 CKAAVAWGAGQP--LVVEE-VEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-----------------------IFPRI 66 (291)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~-~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~-----------------------~~p~~ 66 (291)
||++++.+++.+ +.+.+ .+.|.+.+++|+|||.++++|++|...+.|.. ..|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 578888876643 55554 47778899999999999999999998876532 35689
Q ss_pred cCcceeEEEEEcCCCCCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCcc
Q 022819 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVS 146 (291)
Q Consensus 67 ~G~e~~G~V~~vG~~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g 146 (291)
+|||++|+|+++|+++.+|++||+|++.+..+|+.|..|.. | .+ .|.. .+ |
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~---~~--~~~~-~~------------------g 131 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----I---DY--IGSE-RD------------------G 131 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----c---cc--cCCC-CC------------------c
Confidence 99999999999999999999999999988877877655321 1 11 1110 11 4
Q ss_pred ceeeEEEeeccceEECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 022819 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 225 (291)
Q Consensus 147 ~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~ 225 (291)
+|++|+.++.+.++++|+++++.+++.+++.+.+||+++ +..++.++++++|+|+ |++|++++++|+.+|+ +++++.
T Consensus 132 ~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~ 209 (350)
T cd08274 132 GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVA 209 (350)
T ss_pred cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEe
Confidence 899999999999999999999999999999999999976 7788999999999997 9999999999999999 788887
Q ss_pred CChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 226 ~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.++ +++.++++|++.+++... ....+ ...+.+ ++|++||++|+ ..+..++++++++|++
T Consensus 210 ~~~-~~~~~~~~g~~~~~~~~~--~~~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~ 269 (350)
T cd08274 210 GAA-KEEAVRALGADTVILRDA--PLLAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPGGRY 269 (350)
T ss_pred Cch-hhHHHHhcCCeEEEeCCC--ccHHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccCCEE
Confidence 655 888889999876555432 33333 444555 89999999998 5789999999999876
No 89
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.98 E-value=4.3e-30 Score=232.68 Aligned_cols=227 Identities=23% Similarity=0.359 Sum_probs=197.8
Q ss_pred eeeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCC
Q 022819 12 TCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF 85 (291)
Q Consensus 12 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~ 85 (291)
||||+++.+++.+ +.+++.+.|.+.++||+|||.++++|+.|...+.+.. ..|.++|+|++|+|+++|+++.++
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 5899999988753 6777888888999999999999999999998887654 234689999999999999999999
Q ss_pred CCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCC
Q 022819 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (291)
Q Consensus 86 ~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~ 165 (291)
++||+|+.+.. + |+|++|+.++.+.++++|++
T Consensus 81 ~~Gd~V~~~~~------------------------------~------------------g~~~~~~~v~~~~~~~ip~~ 112 (334)
T PTZ00354 81 KEGDRVMALLP------------------------------G------------------GGYAEYAVAHKGHVMHIPQG 112 (334)
T ss_pred CCCCEEEEecC------------------------------C------------------CceeeEEEecHHHcEeCCCC
Confidence 99999965411 1 38999999999999999999
Q ss_pred CChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeC
Q 022819 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (291)
Q Consensus 166 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~ 244 (291)
+++.+++.+.+.+.+||+++.+...+.++++++|+|+ |++|++++++|+.+|+ .++.+.+++++.+.++++|++.+++
T Consensus 113 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (334)
T PTZ00354 113 YTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIR 191 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999999888889999999999986 9999999999999999 6677888999999999999988887
Q ss_pred CCCCCch-HHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 245 PNDNNEP-VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 245 ~~~~~~~-~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
... .+ +.+.+.+.+.+ ++|++||++++ ..+..++++++++|++
T Consensus 192 ~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~ 236 (334)
T PTZ00354 192 YPD--EEGFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVDGKW 236 (334)
T ss_pred cCC--hhHHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccCCeE
Confidence 754 33 77778887766 89999999987 6788999999999876
No 90
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.98 E-value=8.4e-31 Score=239.10 Aligned_cols=234 Identities=28% Similarity=0.410 Sum_probs=200.0
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 13 ~~a~~~~~~~-~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
|+|+++..++ +.++++++|.|.|+++||+||+.++++|++|+....+.. ..|.++|+|++|+|+.+|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFIPSYPAILGCDFAGTVVEVGSGVTRFKVGD 80 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccccCCCceeeeeeeEEEEEeCCCcCcCCCCC
Confidence 6899999884 348899999999999999999999999999988775543 3577899999999999999999999999
Q ss_pred EEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChh
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~ 169 (291)
+|+......|+ +.. . .|+|++|+.++.+.++++|++++++
T Consensus 81 ~V~~~~~~~~~---------------------~~~-~------------------~g~~~~~~~v~~~~~~~ip~~~~~~ 120 (339)
T cd08249 81 RVAGFVHGGNP---------------------NDP-R------------------NGAFQEYVVADADLTAKIPDNISFE 120 (339)
T ss_pred EEEEEeccccC---------------------CCC-C------------------CCcccceEEechhheEECCCCCCHH
Confidence 99876443211 000 1 2489999999999999999999999
Q ss_pred hhhhhhhhhhhhHhHHHhhcCC----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC
Q 022819 170 KICLLSCGLSAGLGAAWNVADI----------SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (291)
Q Consensus 170 ~aa~~~~~~~ta~~~l~~~~~~----------~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g 238 (291)
+++.+++.+.+||+++.+..++ .++++++|+|+ |++|++++++|+.+|+ +++++. ++++.+.++++|
T Consensus 121 ~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g 198 (339)
T cd08249 121 EAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLG 198 (339)
T ss_pred HceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcC
Confidence 9999999999999987766554 78999999987 8999999999999999 788776 568889999999
Q ss_pred CceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhcc--Cccc
Q 022819 239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCD--VRSI 290 (291)
Q Consensus 239 ~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~--~G~i 290 (291)
++.+++.+. .++.+.+++++.+++|++||++|++..+..+++++++ +|++
T Consensus 199 ~~~v~~~~~--~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~ 250 (339)
T cd08249 199 ADAVFDYHD--PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKL 250 (339)
T ss_pred CCEEEECCC--chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEE
Confidence 988888765 6777788877766899999999986788999999999 8875
No 91
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.4e-29 Score=229.34 Aligned_cols=248 Identities=27% Similarity=0.355 Sum_probs=207.6
Q ss_pred eeEEEEecCC--CCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAG--QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~--~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
|||+++.+.+ +.+++++.+.|.++++|++||+.++++|++|+....+.. ..|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 6899999664 348888888888999999999999999999999887654 2466899999999999999999999
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||+|+......|+. +.++.|... ...|.. . .|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~------~~~~~~~~~--~~~~~~-~------------------~g~~~~~~~~~~~~~~~lp~~~ 133 (336)
T cd08276 81 VGDRVVPTFFPNWLD------GPPTAEDEA--SALGGP-I------------------DGVLAEYVVLPEEGLVRAPDHL 133 (336)
T ss_pred CCCEEEEeccccccc------ccccccccc--cccccc-c------------------CceeeeEEEecHHHeEECCCCC
Confidence 999999877655533 333344322 122211 1 2489999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~ 246 (291)
++.+++.+.+.+.+||+++.+...++++++++|+|+|++|++++++|+++|+ ++++++.++++++.++++|++.+++.+
T Consensus 134 ~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 212 (336)
T cd08276 134 SFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYR 212 (336)
T ss_pred CHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCC
Confidence 9999999999999999998888899999999999889999999999999999 899999999999999999998888764
Q ss_pred CCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 247 ~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
. ..++...+.+++.+ ++|+++|+++. ..+..++++++++|++
T Consensus 213 ~-~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~G~~ 255 (336)
T cd08276 213 T-TPDWGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPGGVI 255 (336)
T ss_pred c-ccCHHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCCCEE
Confidence 2 14567778888876 89999999986 5788999999999875
No 92
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.97 E-value=5.8e-30 Score=224.49 Aligned_cols=223 Identities=33% Similarity=0.511 Sum_probs=192.6
Q ss_pred cEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCCCCCEEEeecccCCCCCccccCCCCCccc
Q 022819 39 EIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE 114 (291)
Q Consensus 39 eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~ 114 (291)
||+|||.++++|+.|...+.+.. .+|.++|+|++|+|+++|+++..|++||+|+..+..+|+.|.+|.. .|.
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 68999999999999999887754 3578899999999999999999999999999999999999999986 565
Q ss_pred cccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCC
Q 022819 115 VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKG 194 (291)
Q Consensus 115 ~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~ 194 (291)
..... +.. ..|+|++|+.++.+.++++|+++++++++.++..+.+||+++.+...+.++
T Consensus 77 ~~~~~--~~~-------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~ 135 (271)
T cd05188 77 GGGIL--GEG-------------------LDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPG 135 (271)
T ss_pred CCCEe--ccc-------------------cCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCC
Confidence 55431 111 124899999999999999999999999999999999999998777777999
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcC-CccEEEEccCC
Q 022819 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD 273 (291)
Q Consensus 195 ~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~ 273 (291)
++|+|+|+|++|++++++++.+|. +|+++++++++.+.++++|++.+++..+ .+..+.+. ...+ ++|+++++++.
T Consensus 136 ~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~-~~~~~~~d~vi~~~~~ 211 (271)
T cd05188 136 DTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELR-LTGGGGADVVIDAVGG 211 (271)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc--CCHHHHHH-HhcCCCCCEEEECCCC
Confidence 999999986699999999999998 9999999999999999999888887764 45555555 4444 89999999998
Q ss_pred hHHHHHHHHhhccCccc
Q 022819 274 TGMITTALQSCCDVRSI 290 (291)
Q Consensus 274 ~~~~~~~~~~l~~~G~i 290 (291)
......++++++++|++
T Consensus 212 ~~~~~~~~~~l~~~G~~ 228 (271)
T cd05188 212 PETLAQALRLLRPGGRI 228 (271)
T ss_pred HHHHHHHHHhcccCCEE
Confidence 66788999999999876
No 93
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.97 E-value=1.4e-29 Score=229.06 Aligned_cols=229 Identities=17% Similarity=0.203 Sum_probs=189.5
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
|||+++.+++.+ +++++.|.|.|.++||+||+.++++|++|.....+.. .+|.++|||++|+|+++| +.+|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 689999988764 8889999999999999999999999999986654221 348899999999999954 56799
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||+|+..... .|.. . .|+|++|+.++.+.++++|+++
T Consensus 79 ~Gd~V~~~~~~-----------------------~~~~-~------------------~g~~~~~~~v~~~~~~~~p~~~ 116 (326)
T cd08289 79 PGDEVIVTSYD-----------------------LGVS-H------------------HGGYSEYARVPAEWVVPLPKGL 116 (326)
T ss_pred CCCEEEEcccc-----------------------cCCC-C------------------CCcceeEEEEcHHHeEECCCCC
Confidence 99999765321 1110 1 2499999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcC---CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceE
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVAD---ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~---~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~ 242 (291)
++++++.+++.+.|||.++....+ ..++++|+|+|+ |++|.+++|+|+.+|+ +|+++++++++.+.++++|++.+
T Consensus 117 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v 195 (326)
T cd08289 117 TLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEV 195 (326)
T ss_pred CHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEE
Confidence 999999999999999987654332 345789999987 9999999999999999 89999999999999999999888
Q ss_pred eCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 243 i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++.++ . ..+.+.+++.+++|++||++|+ ..+..++++++++|++
T Consensus 196 ~~~~~--~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~ 239 (326)
T cd08289 196 IPREE--L-QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYGGSV 239 (326)
T ss_pred Ecchh--H-HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcCCEE
Confidence 88754 2 3455666654489999999998 6789999999999986
No 94
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.97 E-value=2e-29 Score=227.63 Aligned_cols=229 Identities=20% Similarity=0.251 Sum_probs=190.0
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~~--~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
|||+++.+++. ++++++.|.|.++++||+||+.++++|++|+..+.|.. .+|.++|||++|+|+++ +++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 68999998875 69999999999999999999999999999998887764 24778999999999998 456799
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||+|+..... .|.. . .|+|++|+.++.+.++++|+++
T Consensus 79 ~Gd~V~~~~~~-----------------------~g~~-~------------------~g~~~~~~~v~~~~~~~lp~~~ 116 (325)
T cd05280 79 EGDEVLVTGYD-----------------------LGMN-T------------------DGGFAEYVRVPADWVVPLPEGL 116 (325)
T ss_pred CCCEEEEcccc-----------------------cCCC-C------------------CceeEEEEEEchhhEEECCCCC
Confidence 99999765210 1211 1 1489999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCC--C-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceE
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADI--S-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~--~-~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~ 242 (291)
++++++.+++.+.++|.++....+. . .+++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.+
T Consensus 117 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 195 (325)
T cd05280 117 SLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEV 195 (325)
T ss_pred CHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEE
Confidence 9999999999999999987655433 5 4579999987 9999999999999999 79999999999999999999888
Q ss_pred eCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 243 i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++.++ . .....+....+++|++||++|+ ..+..++++++++|++
T Consensus 196 ~~~~~--~-~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~ 239 (325)
T cd05280 196 LDRED--L-LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYGGVV 239 (325)
T ss_pred Ecchh--H-HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCCCEE
Confidence 87643 2 1222233333489999999998 5789999999999876
No 95
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.97 E-value=1.3e-29 Score=229.58 Aligned_cols=224 Identities=27% Similarity=0.332 Sum_probs=194.5
Q ss_pred eeeEEEEecCCC----CeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCC
Q 022819 12 TCKAAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT 83 (291)
Q Consensus 12 ~~~a~~~~~~~~----~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~ 83 (291)
.||||++.+++. ++++++++.|.+.++||+|||.++++|+.|+..+.|.. .+|.++|+|++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 379999998765 48899999999999999999999999999998877653 4577899999999999999999
Q ss_pred CCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECC
Q 022819 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (291)
Q Consensus 84 ~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip 163 (291)
+|++||+|+... . |+|++|+.++.+.++++|
T Consensus 81 ~~~~Gd~V~~~~-------------------------------~------------------g~~~s~~~v~~~~~~~ip 111 (329)
T cd08250 81 DFKVGDAVATMS-------------------------------F------------------GAFAEYQVVPARHAVPVP 111 (329)
T ss_pred CCCCCCEEEEec-------------------------------C------------------cceeEEEEechHHeEECC
Confidence 999999997541 1 389999999999999999
Q ss_pred CCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceE
Q 022819 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (291)
Q Consensus 164 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~ 242 (291)
++ +.+++.++..+.+||+++.+..++.++++++|+|+ |.+|.+++++|+.+|+ .++++.+++++.+.++++|++.+
T Consensus 112 ~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v 188 (329)
T cd08250 112 EL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRP 188 (329)
T ss_pred CC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceE
Confidence 97 35677888899999999888889999999999986 9999999999999999 88998889999999999998888
Q ss_pred eCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 243 i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++.+. .++.+.+....++++|++||++|+ ..+..++++++++|++
T Consensus 189 ~~~~~--~~~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~g~~ 233 (329)
T cd08250 189 INYKT--EDLGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALKGRL 233 (329)
T ss_pred EeCCC--ccHHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccCCeE
Confidence 87654 556666666554589999999997 6789999999999875
No 96
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.97 E-value=1.9e-29 Score=227.71 Aligned_cols=227 Identities=23% Similarity=0.315 Sum_probs=195.5
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC------CCCcccCcceeEEEEEcCCCCCC
Q 022819 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE 84 (291)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~ 84 (291)
|||+++.+++.+ +.+.+.+.|.+.++||+||+.++++|+.|+..+.|.. ..|.++|||++|+|+++|+++..
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 588999876543 6677777777899999999999999999998887643 33578999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCC
Q 022819 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (291)
Q Consensus 85 ~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~ 164 (291)
+++||+|+..... .+ |+|++|+.++.+.++++|+
T Consensus 81 ~~~Gd~V~~~~~~----------------------------~~------------------g~~~~~~~v~~~~~~~lp~ 114 (324)
T cd08244 81 AWLGRRVVAHTGR----------------------------AG------------------GGYAELAVADVDSLHPVPD 114 (324)
T ss_pred CCCCCEEEEccCC----------------------------CC------------------ceeeEEEEEchHHeEeCCC
Confidence 9999999765210 11 4899999999999999999
Q ss_pred CCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEe
Q 022819 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (291)
Q Consensus 165 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i 243 (291)
++++++++.+++.+.+|| ++.+..+++++++++|+|+ |++|.+++++|+.+|+ +++++++++++.+.++++|++.++
T Consensus 115 ~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 192 (324)
T cd08244 115 GLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAV 192 (324)
T ss_pred CCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence 999999999999999995 5678889999999999985 9999999999999999 899999999999999999998888
Q ss_pred CCCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 244 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++++ .++.+.+.+.+.+ ++|+++|++|+. ....++++++++|++
T Consensus 193 ~~~~--~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~ 237 (324)
T cd08244 193 DYTR--PDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPGGRF 237 (324)
T ss_pred ecCC--ccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccCcEE
Confidence 7765 6677778877776 899999999985 568899999998875
No 97
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.97 E-value=3.8e-29 Score=227.12 Aligned_cols=229 Identities=23% Similarity=0.229 Sum_probs=195.6
Q ss_pred eeEEEEecCCCC-----eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCC
Q 022819 13 CKAAVAWGAGQP-----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE 84 (291)
Q Consensus 13 ~~a~~~~~~~~~-----~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~ 84 (291)
|||+++.+++.+ ++.+++|.|.+.+++|+||+.++++|+.|+..+.+.. ..|.++|||++|+|+++|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 578999988764 5666788888899999999999999999998877654 25678999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCC
Q 022819 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (291)
Q Consensus 85 ~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~ 164 (291)
|++||+|+..... ..+ |+|++|+.++.+.++++|+
T Consensus 81 ~~~Gd~V~~~~~~---------------------------~~~------------------g~~~~~~~v~~~~~~~ip~ 115 (336)
T cd08252 81 FKVGDEVYYAGDI---------------------------TRP------------------GSNAEYQLVDERIVGHKPK 115 (336)
T ss_pred CCCCCEEEEcCCC---------------------------CCC------------------ccceEEEEEchHHeeeCCC
Confidence 9999999654110 011 4899999999999999999
Q ss_pred CCChhhhhhhhhhhhhhHhHHHhhcCCCC-----CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHHc
Q 022819 165 IAPLEKICLLSCGLSAGLGAAWNVADISK-----GSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF 237 (291)
Q Consensus 165 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~vlV~G~-g~~G~~~i~~a~~~g-~~~vi~~~~~~~~~~~a~~~ 237 (291)
++++++++.+++.+.++|+++.+...+.+ +++|+|+|+ |++|++++++|+.+| + +++++++++++.++++++
T Consensus 116 ~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~ 194 (336)
T cd08252 116 SLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKEL 194 (336)
T ss_pred CCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhc
Confidence 99999999999999999998888888887 999999985 999999999999999 7 899999999999999999
Q ss_pred CCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 238 g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
|++.+++.+. ++...+.....+++|++||++|+...+..++++++++|++
T Consensus 195 g~~~~~~~~~---~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~ 244 (336)
T cd08252 195 GADHVINHHQ---DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHI 244 (336)
T ss_pred CCcEEEeCCc---cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEE
Confidence 9988887652 4555565443348999999999767899999999999876
No 98
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.97 E-value=1.9e-29 Score=230.41 Aligned_cols=226 Identities=24% Similarity=0.303 Sum_probs=191.3
Q ss_pred eeEEEEecCCCC---eEEEEeecCCC-CCCcEEEEEeEeeCChhhhhhhccc------------------CCCCcccCcc
Q 022819 13 CKAAVAWGAGQP---LVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQ------------------AIFPRIFGHE 70 (291)
Q Consensus 13 ~~a~~~~~~~~~---~~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~------------------~~~p~~~G~e 70 (291)
|||+++.++++| +++++++.|.| +++||+||++++++|++|...+.|. ..+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 688999888876 89999999999 4999999999999999999887663 1457799999
Q ss_pred eeEEEEEcCCCCCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceee
Q 022819 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150 (291)
Q Consensus 71 ~~G~V~~vG~~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~ 150 (291)
++|+|+++|+++.+|++||||+..+.. + . .|+|++
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~--------------------------~-~------------------~g~~~~ 115 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP--------------------------W-S------------------QGTHAE 115 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC--------------------------C-C------------------Ccccee
Confidence 999999999999999999999765321 0 1 148999
Q ss_pred EEEeeccceEECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCC----CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 022819 151 YTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISK----GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 225 (291)
Q Consensus 151 ~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~----~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~ 225 (291)
|+.++.+.++++|+++++++++.+++.+.++|+++.+...+.+ +++++|+|+ |++|++++++|+.+|+ +++++.
T Consensus 116 ~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~ 194 (350)
T cd08248 116 YVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTC 194 (350)
T ss_pred EEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEe
Confidence 9999999999999999999999999999999998877777654 999999986 9999999999999999 788776
Q ss_pred CChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 226 ~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++ ++.+.++++|++.+++... .++...+... +++|++||++|++ .+..++++++++|++
T Consensus 195 ~~-~~~~~~~~~g~~~~~~~~~--~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~G~~ 253 (350)
T cd08248 195 ST-DAIPLVKSLGADDVIDYNN--EDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKGGTY 253 (350)
T ss_pred Cc-chHHHHHHhCCceEEECCC--hhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccCCEE
Confidence 54 6788889999988887654 4444444331 3899999999985 789999999999986
No 99
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=6.6e-29 Score=223.29 Aligned_cols=228 Identities=27% Similarity=0.381 Sum_probs=193.6
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCC
Q 022819 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (291)
Q Consensus 13 ~~a~~~~~~~~--~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~ 87 (291)
||++++.+++. .+.+.+.+.|.+.++||+||+.++++|+.|+..+.+.. ..|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 57888887654 26777888888899999999999999999998887754 4467899999999999995 57999
Q ss_pred CCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCC
Q 022819 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (291)
Q Consensus 88 GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~ 167 (291)
||+|+.+... .|.. . .|+|++|+.++...++++|++++
T Consensus 79 Gd~V~~~~~~-----------------------~~~~-~------------------~g~~~~~~~~~~~~~~~ip~~~~ 116 (320)
T cd08243 79 GQRVATAMGG-----------------------MGRT-F------------------DGSYAEYTLVPNEQVYAIDSDLS 116 (320)
T ss_pred CCEEEEecCC-----------------------CCCC-C------------------CcccceEEEcCHHHcEeCCCCCC
Confidence 9999776321 0000 1 14899999999999999999999
Q ss_pred hhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCC
Q 022819 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (291)
Q Consensus 168 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~ 246 (291)
+++++.+++++.+||+++.+...+.++++|+|+|+ |++|.+++|+|+.+|+ +|+++..++++.+.++++|++.+++.
T Consensus 117 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~- 194 (320)
T cd08243 117 WAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID- 194 (320)
T ss_pred HHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-
Confidence 99999999999999999888888999999999987 9999999999999999 79999889999999999999887754
Q ss_pred CCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 247 ~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
. .++.+.+.++ ++++|++||++|+ ..+..++++++++|++
T Consensus 195 ~--~~~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~ 234 (320)
T cd08243 195 D--GAIAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPGGIV 234 (320)
T ss_pred C--ccHHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccCCEE
Confidence 2 4566677777 4489999999998 6789999999999886
No 100
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.97 E-value=8.2e-29 Score=223.88 Aligned_cols=227 Identities=20% Similarity=0.232 Sum_probs=187.5
Q ss_pred eEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCCC
Q 022819 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (291)
Q Consensus 14 ~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~~ 87 (291)
||+++.+.+.| ++++++|.|.+.++||+||+.++++|++|+..+.|.. ..|.++|||++|+|++ +++..|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 57888877664 7899999999999999999999999999998887754 3478899999999998 55678999
Q ss_pred CCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCC
Q 022819 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (291)
Q Consensus 88 GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~ 167 (291)
||+|+..... .|.. . .|+|++|+.++.+.++++|++++
T Consensus 79 Gd~V~~~~~~-----------------------~~~~-~------------------~g~~~~~~~~~~~~~~~iP~~~~ 116 (323)
T TIGR02823 79 GDEVIVTGYG-----------------------LGVS-H------------------DGGYSQYARVPADWLVPLPEGLS 116 (323)
T ss_pred CCEEEEccCC-----------------------CCCC-C------------------CccceEEEEEchhheEECCCCCC
Confidence 9999765321 1110 1 24899999999999999999999
Q ss_pred hhhhhhhhhhhhhhHhHHHhh--cCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEe
Q 022819 168 LEKICLLSCGLSAGLGAAWNV--ADISKGS-TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (291)
Q Consensus 168 ~~~aa~~~~~~~ta~~~l~~~--~~~~~~~-~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i 243 (291)
+++++.+++.+.+++.++... .++.+++ +|+|+|+ |++|.+++++|+.+|+ +++++..++++.+.++++|++.++
T Consensus 117 ~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~ 195 (323)
T TIGR02823 117 LREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVI 195 (323)
T ss_pred HHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEE
Confidence 999999999999998876443 3478898 9999987 9999999999999999 788887888888999999998888
Q ss_pred CCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+.++ .+. .++.+..+++|.++|++|+. .+..++++++++|++
T Consensus 196 ~~~~--~~~--~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~ 237 (323)
T TIGR02823 196 DRED--LSP--PGKPLEKERWAGAVDTVGGH-TLANVLAQLKYGGAV 237 (323)
T ss_pred cccc--HHH--HHHHhcCCCceEEEECccHH-HHHHHHHHhCCCCEE
Confidence 7643 222 44455444799999999984 688999999999986
No 101
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.97 E-value=6.2e-29 Score=224.23 Aligned_cols=214 Identities=24% Similarity=0.338 Sum_probs=189.7
Q ss_pred eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCCCCCEEEeecccCCC
Q 022819 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECK 100 (291)
Q Consensus 25 ~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV~~~~~~~~~ 100 (291)
+++++.|.|.+.+++|+||++++++|+.|...+.+.. .+|.++|+|++|+|+++|+++.++++||+|+..+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 6677888899999999999999999999998876654 34578999999999999999999999999976521
Q ss_pred CCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhhhhhhhhhhhh
Q 022819 101 TCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA 180 (291)
Q Consensus 101 ~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t 180 (291)
+ |+|++|+.++.+.++++|+++++.+++.+++.+.+
T Consensus 90 --------------------------~------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~t 125 (323)
T cd05282 90 --------------------------E------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLT 125 (323)
T ss_pred --------------------------C------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHHH
Confidence 1 38999999999999999999999999999999999
Q ss_pred hHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHH
Q 022819 181 GLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI 259 (291)
Q Consensus 181 a~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~ 259 (291)
+|+++.+...+.++++|+|+|+ |.+|++++++|+.+|+ .++++.+++++.+.++++|++.+++++. .++...+.+.
T Consensus 126 a~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~ 202 (323)
T cd05282 126 AWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKEA 202 (323)
T ss_pred HHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHHH
Confidence 9999888888899999999987 8999999999999999 8888888899999999999998888865 5677788888
Q ss_pred hcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 260 TDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 260 ~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+.+ ++|++||++|+. .....+++++++|++
T Consensus 203 ~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~ 233 (323)
T cd05282 203 TGGAGARLALDAVGGE-SATRLARSLRPGGTL 233 (323)
T ss_pred hcCCCceEEEECCCCH-HHHHHHHhhCCCCEE
Confidence 877 999999999985 467889999999876
No 102
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=3.4e-29 Score=227.49 Aligned_cols=225 Identities=28% Similarity=0.391 Sum_probs=180.4
Q ss_pred eeeEEEEecCCCC---eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccCCCCcccCcceeEEEEEcCCCCC-----
Q 022819 12 TCKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVT----- 83 (291)
Q Consensus 12 ~~~a~~~~~~~~~---~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~----- 83 (291)
+++.+.+..+..+ ...++.++|.|.+++++|++.++++||.|+++..|....+. +|.++.|+|...|+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~-~~~~~p~ii~~~g~~~~~~~~~ 82 (347)
T KOG1198|consen 4 KIRRVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIP-LGREFPGIIGRDGSGVVGAVES 82 (347)
T ss_pred ccceEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCC-CccCCCCccccccCCceeEEec
Confidence 4455555544333 55678999999999999999999999999999988872222 55555555555554432
Q ss_pred -------CCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeec
Q 022819 84 -------EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS 156 (291)
Q Consensus 84 -------~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 156 (291)
.+..||++... ...|+|+||..+|.
T Consensus 83 ~g~~~~~~~~~g~~~~~~------------------------------------------------~~~g~~aey~v~p~ 114 (347)
T KOG1198|consen 83 VGDDVVGGWVHGDAVVAF------------------------------------------------LSSGGLAEYVVVPE 114 (347)
T ss_pred cccccccceEeeeEEeec------------------------------------------------cCCCceeeEEEcch
Confidence 23334333211 11259999999999
Q ss_pred cceEECCCCCChhhhhhhhhhhhhhHhHHHhhc------CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022819 157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA------DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE 229 (291)
Q Consensus 157 ~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~------~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~ 229 (291)
..++++|+++++++||+++..+.|||.++.... ++++++.|||+|+ |++|.+++|+|+..++ ..+++.++++
T Consensus 115 ~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e 193 (347)
T KOG1198|consen 115 KLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKE 193 (347)
T ss_pred hhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccc
Confidence 999999999999999999999999999999999 9999999999976 8999999999999995 4555558999
Q ss_pred hHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCcc
Q 022819 230 KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRS 289 (291)
Q Consensus 230 ~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~ 289 (291)
+.++++++|++.++||++ .++.+.++..+++++|+||||+|++ .+...+.++..+|+
T Consensus 194 ~~~l~k~lGAd~vvdy~~--~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~g~ 250 (347)
T KOG1198|consen 194 KLELVKKLGADEVVDYKD--ENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKGGG 250 (347)
T ss_pred hHHHHHHcCCcEeecCCC--HHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccCCc
Confidence 999999999999999997 9999999998844999999999995 56666777766654
No 103
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=2.3e-28 Score=218.90 Aligned_cols=215 Identities=21% Similarity=0.278 Sum_probs=183.3
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccCCCCcccCcceeEEEEEcCCCCCCCCCCCE
Q 022819 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (291)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gdr 90 (291)
||++++.+.+ | +++++.|.|.++++||+||+.++++|+.|.....+. ..|.++|+|++|+|+++|+++..|++||+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~ 78 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER-PDGAVPGWDAAGVVERAAADGSGPAVGAR 78 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-CCCCcccceeEEEEEEeCCCCCCCCCCCE
Confidence 5789888754 4 667788889999999999999999999999876532 45778999999999999999999999999
Q ss_pred EEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhh
Q 022819 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (291)
Q Consensus 91 V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~ 170 (291)
|+.... + |+|++|+.++.+.++++|+++++++
T Consensus 79 V~~~~~------------------------------~------------------g~~~~~~~v~~~~~~~ip~~~~~~~ 110 (305)
T cd08270 79 VVGLGA------------------------------M------------------GAWAELVAVPTGWLAVLPDGVSFAQ 110 (305)
T ss_pred EEEecC------------------------------C------------------cceeeEEEEchHHeEECCCCCCHHH
Confidence 965410 1 4899999999999999999999999
Q ss_pred hhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCC
Q 022819 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (291)
Q Consensus 171 aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~ 249 (291)
++.+++.+.+||+++...... ++++++|+|+ |++|.+++++|+.+|+ +++.+.+++++.+.++++|++..++...
T Consensus 111 a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-- 186 (305)
T cd08270 111 AATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS-- 186 (305)
T ss_pred HHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc--
Confidence 999999999999987666655 5999999987 9999999999999999 8999989999999999999876554321
Q ss_pred chHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 250 ~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+ +..+++|+++|++|+. .+..++++++.+|++
T Consensus 187 -~-------~~~~~~d~vl~~~g~~-~~~~~~~~l~~~G~~ 218 (305)
T cd08270 187 -E-------LSGAPVDLVVDSVGGP-QLARALELLAPGGTV 218 (305)
T ss_pred -c-------ccCCCceEEEECCCcH-HHHHHHHHhcCCCEE
Confidence 1 2224799999999984 789999999999886
No 104
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=2.3e-28 Score=219.44 Aligned_cols=216 Identities=29% Similarity=0.455 Sum_probs=184.6
Q ss_pred cCCCCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhh-cccC-----CCCcccCcceeEEEEEcCCCCCCCCCCCEEEe
Q 022819 20 GAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW-ETQA-----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93 (291)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~-~g~~-----~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV~~ 93 (291)
++++ +++++++.|.+.++||+||+.++++|+.|...+ .+.. .+|.++|+|++|+|+++|+++.++++||+|+.
T Consensus 3 ~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 81 (312)
T cd08269 3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG 81 (312)
T ss_pred CCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence 4443 899999999999999999999999999998887 6543 13678999999999999999999999999976
Q ss_pred ecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhhhhh
Q 022819 94 VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL 173 (291)
Q Consensus 94 ~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~ 173 (291)
+.. |+|++|+.++.+.++++|+++ ..++.
T Consensus 82 ~~~-------------------------------------------------g~~~~~~~v~~~~~~~lP~~~--~~~~~ 110 (312)
T cd08269 82 LSG-------------------------------------------------GAFAEYDLADADHAVPLPSLL--DGQAF 110 (312)
T ss_pred ecC-------------------------------------------------CcceeeEEEchhheEECCCch--hhhHH
Confidence 521 389999999999999999998 23333
Q ss_pred hhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHH
Q 022819 174 LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ 253 (291)
Q Consensus 174 ~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~ 253 (291)
...++.++++++. ..+++++++++|+|+|.+|.+++++|+.+|++.++++.+++++.++++++|++.+++.+. .++.
T Consensus 111 ~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~ 187 (312)
T cd08269 111 PGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS--EAIV 187 (312)
T ss_pred hhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC--cCHH
Confidence 2367788888765 888999999999988999999999999999943999988999999999999988887654 6788
Q ss_pred HHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 254 QVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 254 ~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+.+.+++.+ ++|+++||+|....+..++++++++|++
T Consensus 188 ~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~ 225 (312)
T cd08269 188 ERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRL 225 (312)
T ss_pred HHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEE
Confidence 888888776 9999999998877889999999999876
No 105
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.97 E-value=4.1e-28 Score=222.23 Aligned_cols=231 Identities=18% Similarity=0.300 Sum_probs=189.3
Q ss_pred eEEEEecCCCCeEEEEeecCCC---CCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCC-CC
Q 022819 14 KAAVAWGAGQPLVVEEVEVNPP---QPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT-EF 85 (291)
Q Consensus 14 ~a~~~~~~~~~~~~~~~~~~~~---~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~-~~ 85 (291)
|++++.+++.++++++++.|.| .+++|+||+.++++|++|+..+.+.. ..|.++|+|++|+|+++|++++ .|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 6899999988888888888776 89999999999999999988765432 1377899999999999999998 89
Q ss_pred CCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeecc----ceEE
Q 022819 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG----CAVK 161 (291)
Q Consensus 86 ~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~ 161 (291)
++||+|+......|+ ..|+|++|+.++.. .+++
T Consensus 82 ~~Gd~V~~~~~~~~~-------------------------------------------~~g~~~~~~~v~~~~~~~~~~~ 118 (352)
T cd08247 82 KVGDEVCGIYPHPYG-------------------------------------------GQGTLSQYLLVDPKKDKKSITR 118 (352)
T ss_pred CCCCEEEEeecCCCC-------------------------------------------CCceeeEEEEEccccccceeEE
Confidence 999999766332110 12489999999987 7899
Q ss_pred CCCCCChhhhhhhhhhhhhhHhHHHhhc-CCCCCCEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcC
Q 022819 162 VSSIAPLEKICLLSCGLSAGLGAAWNVA-DISKGSTVVIFGL-GTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFG 238 (291)
Q Consensus 162 ip~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~~g 238 (291)
+|+++++++++.+++.+.+||+++.+.. +++++++++|+|+ |.+|.+++++|+.+|. +.++++. ++++.+.++++|
T Consensus 119 lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g 197 (352)
T cd08247 119 KPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLG 197 (352)
T ss_pred CCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhC
Confidence 9999999999999999999999887777 7999999999987 7999999999999854 3677775 456666888999
Q ss_pred CceEeCCCCCCch---HHHH-HHHHhcC-CccEEEEccCChHHHHHHHHhhc---cCccc
Q 022819 239 VTEFLNPNDNNEP---VQQV-IKRITDG-GADYSFECIGDTGMITTALQSCC---DVRSI 290 (291)
Q Consensus 239 ~~~~i~~~~~~~~---~~~~-~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~---~~G~i 290 (291)
++.+++.++ .+ +... ++..+++ ++|++|||+|+......++++++ ++|++
T Consensus 198 ~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~ 255 (352)
T cd08247 198 ADHFIDYDA--HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHY 255 (352)
T ss_pred CCEEEecCC--CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEE
Confidence 988888754 33 3333 4444424 89999999998667888999999 88865
No 106
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.97 E-value=4.3e-28 Score=217.27 Aligned_cols=226 Identities=29% Similarity=0.420 Sum_probs=196.1
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
||++++.+++.+ +++++.+.|.+.+++|+||+.++++|+.|+..+.+.. ..|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 689999886544 7777888888899999999999999999998876644 3568899999999999999999999
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||+|+.+.. + |+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~------------------------------~------------------g~~~~~~~~~~~~~~~~p~~~ 112 (323)
T cd05276 81 VGDRVCALLA------------------------------G------------------GGYAEYVVVPAGQLLPVPEGL 112 (323)
T ss_pred CCCEEEEecC------------------------------C------------------CceeEEEEcCHHHhccCCCCC
Confidence 9999965411 1 389999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~ 245 (291)
++.+++.+...+.++|+++.+...+.++++++|+|+ |++|++++++++.+|+ .++++++++++++.++++|++.+++.
T Consensus 113 ~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (323)
T cd05276 113 SLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINY 191 (323)
T ss_pred CHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeC
Confidence 999999999999999999888888999999999986 8999999999999999 89999899999999999998888777
Q ss_pred CCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.. .++...+.+++.+ ++|++++++|+. .+..+++.++++|++
T Consensus 192 ~~--~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~~~~g~~ 234 (323)
T cd05276 192 RT--EDFAEEVKEATGGRGVDVILDMVGGD-YLARNLRALAPDGRL 234 (323)
T ss_pred Cc--hhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHHhhccCCEE
Confidence 54 5677777777766 899999999984 478889999988875
No 107
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.96 E-value=2.2e-28 Score=211.02 Aligned_cols=211 Identities=22% Similarity=0.284 Sum_probs=179.7
Q ss_pred eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhccc--CCCCcccCcceeEEEEEc--CCCCCCCCCCCEEEeecccCCC
Q 022819 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--AIFPRIFGHEASGIVESV--GPGVTEFNEGEHVLTVFIGECK 100 (291)
Q Consensus 25 ~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~--~~~p~~~G~e~~G~V~~v--G~~~~~~~~GdrV~~~~~~~~~ 100 (291)
|+++|.++|+|+++|||+|+.+.+++|....-++.. +-.|.-+|-...|.++.. -|+..+|++||.|+..
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~------ 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV------ 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHHHeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec------
Confidence 999999999999999999999999999544322222 145666776655544332 2667889999999533
Q ss_pred CCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChh--hhhhhhhhh
Q 022819 101 TCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE--KICLLSCGL 178 (291)
Q Consensus 101 ~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~--~aa~~~~~~ 178 (291)
.+|++|..++.+.+.|++++.-+. ....+..+.
T Consensus 101 ---------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG 135 (340)
T COG2130 101 ---------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPG 135 (340)
T ss_pred ---------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCch
Confidence 289999999999999998764333 333467788
Q ss_pred hhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCceEeCCCCCCchHHHHH
Q 022819 179 SAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVI 256 (291)
Q Consensus 179 ~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~g~~~~i~~~~~~~~~~~~~ 256 (291)
.|||.+|.+.++.++|++|+|.++ |++|..+.|+||.+|+ +||++..++||.+++++ +|.+.+|||+. +++.+.+
T Consensus 136 ~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~~L 212 (340)
T COG2130 136 LTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQAL 212 (340)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHHHH
Confidence 999999999999999999999976 9999999999999999 99999999999999987 99999999998 7999999
Q ss_pred HHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 257 KRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 257 ~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
++.++.++|+.||++|+ +.+...+..|+..+||
T Consensus 213 ~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~aRi 245 (340)
T COG2130 213 KEACPKGIDVYFENVGG-EVLDAVLPLLNLFARI 245 (340)
T ss_pred HHHCCCCeEEEEEcCCc-hHHHHHHHhhccccce
Confidence 99999999999999999 7899999999999986
No 108
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.96 E-value=6.3e-28 Score=216.57 Aligned_cols=231 Identities=25% Similarity=0.338 Sum_probs=197.7
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
||++++..++.+ +.+.++|.|.+.+++|+|++.++++|++|...+.|.. ..|.++|||++|+|+++|+++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 477888765543 7788999999999999999999999999998876643 4577899999999999999999999
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||+|+...... .+ . .|++++|+.++.+.++++|+++
T Consensus 81 ~Gd~v~~~~~~~----------------------~~---~------------------~g~~~~~~~~~~~~~~~ip~~~ 117 (325)
T cd08253 81 VGDRVWLTNLGW----------------------GR---R------------------QGTAAEYVVVPADQLVPLPDGV 117 (325)
T ss_pred CCCEEEEecccc----------------------CC---C------------------CcceeeEEEecHHHcEeCCCCC
Confidence 999997764210 00 1 1489999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~ 245 (291)
++.+++.+++.+.++|+.+.+..++.++++++|+|+ |.+|++++++++.+|+ +++++++++++.+.++++|++.+++.
T Consensus 118 ~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 196 (325)
T cd08253 118 SFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNY 196 (325)
T ss_pred CHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence 999999999999999999888889999999999986 9999999999999999 89999999999999999999888876
Q ss_pred CCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.. .++...+.+++.+ ++|++++++++. .....++.++.+|++
T Consensus 197 ~~--~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~ 239 (325)
T cd08253 197 RA--EDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPGGRI 239 (325)
T ss_pred CC--cCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCCCEE
Confidence 54 5677777777666 899999999984 567888999888875
No 109
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.96 E-value=7.8e-28 Score=217.91 Aligned_cols=221 Identities=20% Similarity=0.214 Sum_probs=186.7
Q ss_pred eeEEEEecCCC------CeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC------CCCcccCcceeEEEEEcCC
Q 022819 13 CKAAVAWGAGQ------PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGP 80 (291)
Q Consensus 13 ~~a~~~~~~~~------~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~ 80 (291)
++||++...++ .++++++|.|.+.+++|+||+.++++|+.|.....+.. ..+.++|+|++|+|+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 57888876432 28899999999999999999999999998765554432 1245789999999999996
Q ss_pred CCCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeec-cce
Q 022819 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCA 159 (291)
Q Consensus 81 ~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~ 159 (291)
. +|++||||+.+ ++|++|+.++. +.+
T Consensus 82 ~--~~~~Gd~V~~~---------------------------------------------------~~~~~~~~v~~~~~~ 108 (329)
T cd05288 82 P--DFKVGDLVSGF---------------------------------------------------LGWQEYAVVDGASGL 108 (329)
T ss_pred C--CCCCCCEEecc---------------------------------------------------cceEEEEEecchhhc
Confidence 4 79999999532 27999999999 999
Q ss_pred EECCCCCC--hhhhhh-hhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022819 160 VKVSSIAP--LEKICL-LSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (291)
Q Consensus 160 ~~ip~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~ 235 (291)
+++|++++ +..++. +++.+.+||+++.+...+.++++|+|+|+ |++|++++|+|+.+|+ +++++++++++.+.++
T Consensus 109 ~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~ 187 (329)
T cd05288 109 RKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLV 187 (329)
T ss_pred EECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99999995 545555 88899999999888888999999999985 9999999999999999 8999989999999998
Q ss_pred H-cCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 236 A-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 236 ~-~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+ +|++.++++++ .++.+.+.+.+.+++|++||++|+ ..+..++++++++|++
T Consensus 188 ~~~g~~~~~~~~~--~~~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~ 240 (329)
T cd05288 188 EELGFDAAINYKT--PDLAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKGGRI 240 (329)
T ss_pred hhcCCceEEecCC--hhHHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCCceE
Confidence 8 99988888765 567777777775589999999998 6789999999999875
No 110
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.96 E-value=1.1e-27 Score=214.23 Aligned_cols=225 Identities=30% Similarity=0.390 Sum_probs=195.6
Q ss_pred eEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC--CCCcccCcceeEEEEEcCCCCCCCCCCC
Q 022819 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (291)
Q Consensus 14 ~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 89 (291)
+|+.+..++.+ +.+.+.+.+.+.++||+|+|.++++|+.|.....+.. .+|.++|||++|+|+.+|+++.+|++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPLPFVLGVEGAGVVEAVGPGVTGFKVGD 80 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCCCCCccCCcceeEEEEEECCCCCCCCCCC
Confidence 46777666544 5667777777899999999999999999998887754 3567899999999999999999999999
Q ss_pred EEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChh
Q 022819 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (291)
Q Consensus 90 rV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~ 169 (291)
+|+.... .|+|++|+.++.+.++++|+++++.
T Consensus 81 ~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~ 112 (320)
T cd05286 81 RVAYAGP------------------------------------------------PGAYAEYRVVPASRLVKLPDGISDE 112 (320)
T ss_pred EEEEecC------------------------------------------------CCceeEEEEecHHHceeCCCCCCHH
Confidence 9976420 1389999999999999999999999
Q ss_pred hhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 022819 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (291)
Q Consensus 170 ~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~ 248 (291)
+++.+.+.+.++|+++.+..++.++++|+|+|+ |++|.+++++++.+|+ .++++..++++.+.++++|++.+++...
T Consensus 113 ~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 190 (320)
T cd05286 113 TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRD- 190 (320)
T ss_pred HHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCCc-
Confidence 999999899999999888889999999999985 9999999999999999 8999989999999999999988887654
Q ss_pred CchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 249 ~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.++...+.+++.+ ++|++|+|+++ .....++++++++|++
T Consensus 191 -~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~ 231 (320)
T cd05286 191 -EDFVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPRGTL 231 (320)
T ss_pred -hhHHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccCcEE
Confidence 6777788888776 89999999998 5788999999999875
No 111
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=9.5e-28 Score=215.92 Aligned_cols=229 Identities=26% Similarity=0.370 Sum_probs=197.0
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
|||+++.+++.+ +.+++.+.|.+.+++|+|++.++++|++|.....+.. ..|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 689999988765 7788888888999999999999999999998876653 2377899999999999999999999
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||+|+..... ... ..|+|++|+.++...++++|+++
T Consensus 81 ~Gd~V~~~~~~-------------------------~~~------------------~~g~~~~~~~v~~~~~~~~p~~~ 117 (326)
T cd08272 81 VGDEVYGCAGG-------------------------LGG------------------LQGSLAEYAVVDARLLALKPANL 117 (326)
T ss_pred CCCEEEEccCC-------------------------cCC------------------CCCceeEEEEecHHHcccCCCCC
Confidence 99999765210 000 12489999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~ 245 (291)
++.+++.+++.+.+||+++.+..++.++++++|+|+ |++|++++++|+.+|+ +++++.++ ++.+.++++|++.+++.
T Consensus 118 ~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~ 195 (326)
T cd08272 118 SMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYY 195 (326)
T ss_pred CHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEec
Confidence 999999999999999998888899999999999985 9999999999999999 88888877 88899999998887776
Q ss_pred CCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.. . +...+.+++.+ ++|.++|++++ ..+..++++++++|++
T Consensus 196 ~~--~-~~~~~~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~ 237 (326)
T cd08272 196 RE--T-VVEYVAEHTGGRGFDVVFDTVGG-ETLDASFEAVALYGRV 237 (326)
T ss_pred ch--h-HHHHHHHhcCCCCCcEEEECCCh-HHHHHHHHHhccCCEE
Confidence 54 4 77778888776 89999999998 4678899999999875
No 112
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1.7e-27 Score=214.57 Aligned_cols=228 Identities=28% Similarity=0.365 Sum_probs=196.6
Q ss_pred eeEEEEecCC--CCeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC---CCCcccCcceeEEEEEcCCCCCCCCC
Q 022819 13 CKAAVAWGAG--QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (291)
Q Consensus 13 ~~a~~~~~~~--~~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~~ 87 (291)
|||+++.+++ +.+.++++|.|++.+++|+||+.++++|++|+..+.+.. ..|.++|||++|+|+.+|+++..+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 6899999988 359999999999999999999999999999988776654 23678999999999999999999999
Q ss_pred CCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCC
Q 022819 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (291)
Q Consensus 88 GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~ 167 (291)
||+|+..... . . .|+|++|+.++.+.++++|++++
T Consensus 81 Gd~V~~~~~~--------------------------~-~------------------~~~~~s~~~~~~~~~~~ip~~~~ 115 (325)
T cd08271 81 GDRVAYHASL--------------------------A-R------------------GGSFAEYTVVDARAVLPLPDSLS 115 (325)
T ss_pred CCEEEeccCC--------------------------C-C------------------CccceeEEEeCHHHeEECCCCCC
Confidence 9999765320 0 1 13899999999999999999999
Q ss_pred hhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCC
Q 022819 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (291)
Q Consensus 168 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~ 246 (291)
+.+++.+.+.+.++++++.+...+.++++++|+|+ |.+|++++++++.+|+ .++++. ++++.+.++++|++.+++..
T Consensus 116 ~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~ 193 (325)
T cd08271 116 FEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYN 193 (325)
T ss_pred HHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCC
Confidence 99999999999999999888889999999999987 7999999999999999 777775 67788888899998888765
Q ss_pred CCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 247 ~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
. .++...+++++.+ ++|.+++++++. .....+++++++|++
T Consensus 194 ~--~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~ 235 (325)
T cd08271 194 D--EDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFNGHL 235 (325)
T ss_pred C--ccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccCCEE
Confidence 4 5677778877766 899999999985 456789999999875
No 113
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1.2e-27 Score=216.68 Aligned_cols=222 Identities=21% Similarity=0.306 Sum_probs=189.1
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
+|||++.+.+.+ +++++.+.|.|.++||+||+.++++|+.|...+.+.. .+|.++|||++|+|+++|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (331)
T cd08273 1 NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFE 80 (331)
T ss_pred CeeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCC
Confidence 478999987654 8888899999999999999999999999998887654 3466899999999999999999999
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||+|+.... . |+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~------------------------------~------------------g~~~~~~~~~~~~~~~~p~~~ 112 (331)
T cd08273 81 VGDRVAALTR------------------------------V------------------GGNAEYINLDAKYLVPVPEGV 112 (331)
T ss_pred CCCEEEEeCC------------------------------C------------------cceeeEEEechHHeEECCCCC
Confidence 9999976521 0 389999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~ 245 (291)
++++++.+++.+.+||+++.+...+.++++++|+|+ |++|++++++|+.+|+ +|+++.. +++.+.++++|+.. ++.
T Consensus 113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~ 189 (331)
T cd08273 113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY 189 (331)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence 999999999999999999888888999999999987 9999999999999999 8888877 88899999999654 444
Q ss_pred CCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.. .++... ....+++|+++|++|+.. +..++++++++|++
T Consensus 190 ~~--~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~g~~ 229 (331)
T cd08273 190 RT--KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPGGTL 229 (331)
T ss_pred CC--cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCCCEE
Confidence 32 333333 333358999999999854 88999999999875
No 114
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.96 E-value=2.7e-27 Score=213.96 Aligned_cols=228 Identities=14% Similarity=0.194 Sum_probs=186.2
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~~--~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
|||+++.+++. .++++++|.|.|+++||+||+.++++|+.|...+.+.. .+|.++|||++|+|++ +++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 68999998775 38899999999999999999999999999998877653 3477899999999999 7777899
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||+|+..... .|.. ..|+|++|+.++.+.++++|+++
T Consensus 79 ~Gd~V~~~~~~-----------------------~~~~-------------------~~g~~~~~~~v~~~~~~~lp~~~ 116 (324)
T cd08288 79 PGDRVVLTGWG-----------------------VGER-------------------HWGGYAQRARVKADWLVPLPEGL 116 (324)
T ss_pred CCCEEEECCcc-----------------------CCCC-------------------CCCcceeEEEEchHHeeeCCCCC
Confidence 99999765211 0000 12489999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHH--hhcCCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceE
Q 022819 167 PLEKICLLSCGLSAGLGAAW--NVADIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~--~~~~~~-~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~ 242 (291)
++++++.+++.+++++.++. +..+.. ++++++|+|+ |++|.+++|+|+.+|+ +++++..++++.+.++++|++.+
T Consensus 117 ~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 195 (324)
T cd08288 117 SARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEI 195 (324)
T ss_pred CHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEE
Confidence 99999999999999887643 123444 6789999987 9999999999999999 88988889999999999999888
Q ss_pred eCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 243 i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+++++ ....++.++.+++|.++|++++ ..+..++..++.+|++
T Consensus 196 ~~~~~----~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~g~~ 238 (324)
T cd08288 196 IDRAE----LSEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYGGAV 238 (324)
T ss_pred EEcch----hhHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCCCEE
Confidence 88753 2224555555578999999997 4667778888877764
No 115
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1e-26 Score=209.24 Aligned_cols=231 Identities=27% Similarity=0.400 Sum_probs=197.3
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
||++++.+.+.+ +.+++.+.|.+.+++++|++.++++|+.|.....+.. ..|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 578888876543 6777888888999999999999999999988876654 2367899999999999999999999
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||+|+.++.... .. .|++++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~-------------------------~~------------------~g~~~~~~~~~~~~~~~~p~~~ 117 (328)
T cd08268 81 VGDRVSVIPAADL-------------------------GQ------------------YGTYAEYALVPAAAVVKLPDGL 117 (328)
T ss_pred CCCEEEecccccc-------------------------CC------------------CccceEEEEechHhcEeCCCCC
Confidence 9999977633100 01 1489999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~ 245 (291)
++++++.+.+.+.++|.++.+...+.++++++|+|+ |.+|++++++++..|+ .++.+++++++.+.++++|.+.+++.
T Consensus 118 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 196 (328)
T cd08268 118 SFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVT 196 (328)
T ss_pred CHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEec
Confidence 999999999999999999888889999999999987 9999999999999999 88999889999999988998888776
Q ss_pred CCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+. .++...+.+.+.+ ++|++++++|+ .....++++++++|++
T Consensus 197 ~~--~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~ 239 (328)
T cd08268 197 DE--EDLVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPGGTL 239 (328)
T ss_pred CC--ccHHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccCCEE
Confidence 54 5677777777766 89999999998 5778889999999875
No 116
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.95 E-value=1.5e-26 Score=205.99 Aligned_cols=208 Identities=28% Similarity=0.392 Sum_probs=182.8
Q ss_pred cCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCCCCCEEEeecccCCCCCccccC
Q 022819 32 VNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKS 107 (291)
Q Consensus 32 ~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV~~~~~~~~~~c~~~~~ 107 (291)
.|.+.+++|+||+.++++|+.|+..+.+.+ .+|.++|+|++|+|+++|+++.+|++||+|+.+...
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 577899999999999999999998887654 347789999999999999999999999999765221
Q ss_pred CCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhhhhhhhhhhhhhHhHHHh
Q 022819 108 DKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187 (291)
Q Consensus 108 ~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~ 187 (291)
. .|+|++|+.++.+.++++|+++++++++.++..+.++|+++ +
T Consensus 72 ------------------~------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~ 114 (303)
T cd08251 72 ------------------S------------------MGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-A 114 (303)
T ss_pred ------------------C------------------CcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-H
Confidence 1 13899999999999999999999999999999999999986 5
Q ss_pred hcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcC-Ccc
Q 022819 188 VADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GAD 265 (291)
Q Consensus 188 ~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g-~~d 265 (291)
..+++++++++|+++ |++|.+++|+++.+|+ +++++.+++++.+.++++|++.+++... .++...+.+++.+ ++|
T Consensus 115 ~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~~~~~d 191 (303)
T cd08251 115 RAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLTGGRGVD 191 (303)
T ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHcCCCCce
Confidence 788999999999965 9999999999999999 8999999999999999999988888765 6677778888776 899
Q ss_pred EEEEccCChHHHHHHHHhhccCccc
Q 022819 266 YSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 266 ~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+++|++++ ..+..++++++++|++
T Consensus 192 ~v~~~~~~-~~~~~~~~~l~~~g~~ 215 (303)
T cd08251 192 VVINTLSG-EAIQKGLNCLAPGGRY 215 (303)
T ss_pred EEEECCcH-HHHHHHHHHhccCcEE
Confidence 99999976 6788889999998875
No 117
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.95 E-value=2.6e-26 Score=206.28 Aligned_cols=226 Identities=27% Similarity=0.386 Sum_probs=194.0
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCC
Q 022819 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (291)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~ 86 (291)
|+|+.+..++.+ +.+++.+.+.+.+++++||+.++++|+.|...+.+.. .+|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 578888776655 6666777777899999999999999999988876654 2457899999999999999999999
Q ss_pred CCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCC
Q 022819 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (291)
Q Consensus 87 ~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~ 166 (291)
+||+|+.... + |+|++|+.++...++++|+++
T Consensus 81 ~Gd~V~~~~~------------------------------~------------------~~~~~~~~~~~~~~~~ip~~~ 112 (325)
T TIGR02824 81 VGDRVCALVA------------------------------G------------------GGYAEYVAVPAGQVLPVPEGL 112 (325)
T ss_pred CCCEEEEccC------------------------------C------------------CcceeEEEecHHHcEeCCCCC
Confidence 9999965411 1 389999999999999999999
Q ss_pred ChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCC
Q 022819 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 167 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~ 245 (291)
++..++.++..+.++|+++.+...+.++++++|+|+ |++|.+++++++.+|+ +++++.+++++.+.++++|++.+++.
T Consensus 113 ~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (325)
T TIGR02824 113 SLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINY 191 (325)
T ss_pred CHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 999999999999999998888899999999999986 9999999999999999 88899888999999999998777766
Q ss_pred CCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.. .++...+.....+ ++|++++++|+ ..+..++++++++|++
T Consensus 192 ~~--~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~ 234 (325)
T TIGR02824 192 RE--EDFVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALDGRI 234 (325)
T ss_pred Cc--hhHHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccCcEE
Confidence 54 5667777777665 89999999997 4778899999998875
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.95 E-value=4e-26 Score=203.64 Aligned_cols=224 Identities=26% Similarity=0.391 Sum_probs=187.6
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC------CCCcccCcceeEEEEEcCCCCCC
Q 022819 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE 84 (291)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~ 84 (291)
|+++++..++.. +.+++.+.|.++++||+||+.++++|+.|...+.+.. ..|.++|||++|+|+++|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 578888877654 5567777788899999999999999999998876642 34788999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCC
Q 022819 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (291)
Q Consensus 85 ~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~ 164 (291)
+++||+|+.++.. + .+ |+|++|+.++...++++|+
T Consensus 81 ~~~G~~V~~~~~~------------------------~---~~------------------g~~~~~~~~~~~~~~~~p~ 115 (309)
T cd05289 81 FKVGDEVFGMTPF------------------------T---RG------------------GAYAEYVVVPADELALKPA 115 (309)
T ss_pred CCCCCEEEEccCC------------------------C---CC------------------CcceeEEEecHHHhccCCC
Confidence 9999999765320 0 01 3899999999999999999
Q ss_pred CCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEe
Q 022819 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (291)
Q Consensus 165 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i 243 (291)
++++..++.+++.+.++++++.+...+.++++++|+|+ |.+|++++++++.+|+ +++++..++ +.+.++++|++..+
T Consensus 116 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~ 193 (309)
T cd05289 116 NLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVI 193 (309)
T ss_pred CCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEE
Confidence 99999999999999999998877777999999999987 9999999999999999 788887766 88888889987777
Q ss_pred CCCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 244 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+... .++.. .+.+ ++|+++|++++. ....++++++++|++
T Consensus 194 ~~~~--~~~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~ 234 (309)
T cd05289 194 DYTK--GDFER----AAAPGGVDAVLDTVGGE-TLARSLALVKPGGRL 234 (309)
T ss_pred eCCC--Cchhh----ccCCCCceEEEECCchH-HHHHHHHHHhcCcEE
Confidence 6654 33322 3333 899999999985 788999999999875
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.95 E-value=1.3e-25 Score=201.32 Aligned_cols=225 Identities=31% Similarity=0.464 Sum_probs=192.5
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCC-CCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCC
Q 022819 13 CKAAVAWGAGQP--LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF 85 (291)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~~~~~-~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~ 85 (291)
|+|+++..++.+ +.+.+.+ |.+. +++++|++.++++|+.|...+.+.. ..|.++|+|++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 578888755433 6676776 6666 4999999999999999998877654 236689999999999999999999
Q ss_pred CCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCC
Q 022819 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (291)
Q Consensus 86 ~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~ 165 (291)
++||+|+.+.. . |++++|+.++.+.++++|++
T Consensus 80 ~~G~~V~~~~~------------------------------~------------------~~~~~~~~~~~~~~~~ip~~ 111 (323)
T cd08241 80 KVGDRVVALTG------------------------------Q------------------GGFAEEVVVPAAAVFPLPDG 111 (323)
T ss_pred CCCCEEEEecC------------------------------C------------------ceeEEEEEcCHHHceeCCCC
Confidence 99999976520 1 38999999999999999999
Q ss_pred CChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeC
Q 022819 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (291)
Q Consensus 166 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~ 244 (291)
++..+++.+...+.+||..+.+...+.++++++|+|+ |++|.+++++|+.+|+ .++.++.++++.+.++++|+...++
T Consensus 112 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd08241 112 LSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVID 190 (323)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeee
Confidence 9999999898899999998877888999999999987 9999999999999999 7999989999999999999877777
Q ss_pred CCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 245 ~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
... .++.+.+...+.+ ++|.+++++|+ ..+..++++++++|++
T Consensus 191 ~~~--~~~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~g~~ 234 (323)
T cd08241 191 YRD--PDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWGGRL 234 (323)
T ss_pred cCC--ccHHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccCCEE
Confidence 654 6677788888776 89999999998 6778899999998875
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=2e-25 Score=202.00 Aligned_cols=224 Identities=23% Similarity=0.351 Sum_probs=187.6
Q ss_pred eEEEEecCCC--CeEEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccCcceeEEEEEcCCCCCCCCC
Q 022819 14 KAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (291)
Q Consensus 14 ~a~~~~~~~~--~~~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~~ 87 (291)
+++++.+++. .+.+.+.+.|.+.+++|+||+.++++|+.|...+.+.. ..|.++|||++|+|+.+|+++.+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4666666554 27777888888999999999999999999998887754 23668999999999999999999999
Q ss_pred CCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCC
Q 022819 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (291)
Q Consensus 88 GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~ 167 (291)
||+|+.+.. + |+|++|+.++.+.++++|++++
T Consensus 81 G~~V~~~~~------------------------------~------------------~~~~~~~~~~~~~~~~ip~~~~ 112 (337)
T cd08275 81 GDRVMGLTR------------------------------F------------------GGYAEVVNVPADQVFPLPDGMS 112 (337)
T ss_pred CCEEEEecC------------------------------C------------------CeeeeEEEecHHHeEECCCCCC
Confidence 999976521 0 3899999999999999999999
Q ss_pred hhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHcCCceEeCC
Q 022819 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (291)
Q Consensus 168 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~-g~~~vi~~~~~~~~~~~a~~~g~~~~i~~ 245 (291)
+.+++.+.+.+.++|+++.+..+++++++|+|+|+ |.+|++++++|+.+ +. .++.. ..+++.+.++++|++.+++.
T Consensus 113 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~ 190 (337)
T cd08275 113 FEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDY 190 (337)
T ss_pred HHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeC
Confidence 99999999999999999888889999999999987 99999999999999 43 33333 34567888888998888877
Q ss_pred CCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 246 ~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+. .++...+++.+.+++|+++|++|+ .....++++++++|++
T Consensus 191 ~~--~~~~~~~~~~~~~~~d~v~~~~g~-~~~~~~~~~l~~~g~~ 232 (337)
T cd08275 191 RT--QDYVEEVKKISPEGVDIVLDALGG-EDTRKSYDLLKPMGRL 232 (337)
T ss_pred CC--CcHHHHHHHHhCCCceEEEECCcH-HHHHHHHHhhccCcEE
Confidence 65 667777877775589999999998 4678899999998875
No 121
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.95 E-value=1.1e-25 Score=198.55 Aligned_cols=200 Identities=24% Similarity=0.325 Sum_probs=177.6
Q ss_pred CcEEEEEeEeeCChhhhhhhcccC-CCCcccCcceeEEEEEcCCCCCCCCCCCEEEeecccCCCCCccccCCCCCccccc
Q 022819 38 EEIRIKVVCTSLCRSDITAWETQA-IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVL 116 (291)
Q Consensus 38 ~eVlVkv~~~~i~~~D~~~~~g~~-~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~ 116 (291)
+||+||+.++++|++|+....+.. .+|.++|+|++|+|+++|+++..|++||+|+....
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~-------------------- 60 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAP-------------------- 60 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCCCCCCccceeeeEEEEeecCCccCCCCCCEEEEEec--------------------
Confidence 589999999999999999887764 35789999999999999999999999999976521
Q ss_pred cccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCE
Q 022819 117 GLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGST 196 (291)
Q Consensus 117 ~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~ 196 (291)
|+|++|+.++.+.++++|+++++.+++.+++.+.++|.++.+...++++++
T Consensus 61 -----------------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~ 111 (293)
T cd05195 61 -----------------------------GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGES 111 (293)
T ss_pred -----------------------------CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCE
Confidence 389999999999999999999999999999999999999888889999999
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC--CceEeCCCCCCchHHHHHHHHhcC-CccEEEEccC
Q 022819 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG--VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272 (291)
Q Consensus 197 vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g--~~~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g 272 (291)
++|+|+ |++|++++++|+.+|+ +++++..++++.+.+++++ ++.+++... .++.+.+.+.+.+ ++|.++|++|
T Consensus 112 vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~~ 188 (293)
T cd05195 112 VLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD--LSFADGILRATGGRGVDVVLNSLS 188 (293)
T ss_pred EEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc--hhHHHHHHHHhCCCCceEEEeCCC
Confidence 999975 9999999999999999 8999988889999998888 677777654 5677888888776 8999999999
Q ss_pred ChHHHHHHHHhhccCccc
Q 022819 273 DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 273 ~~~~~~~~~~~l~~~G~i 290 (291)
+. .+..+++.++++|++
T Consensus 189 ~~-~~~~~~~~l~~~g~~ 205 (293)
T cd05195 189 GE-LLRASWRCLAPFGRF 205 (293)
T ss_pred ch-HHHHHHHhcccCceE
Confidence 85 889999999999875
No 122
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=1.4e-25 Score=201.54 Aligned_cols=213 Identities=26% Similarity=0.331 Sum_probs=176.5
Q ss_pred EEEEeecCCCCCCcEEEEEeEeeCChhhhhhhcccC------CCCcccCcceeEEEEEcCCCCCCCCCCCEEEeecccCC
Q 022819 26 VVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGEC 99 (291)
Q Consensus 26 ~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV~~~~~~~~ 99 (291)
++++.|.|.+.++||+|++.++++|+.|...+.|.. ..|.++|||++|+|+++|+++.++++||+|+.....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 778899999999999999999999999998887754 246789999999999999999999999999765321
Q ss_pred CCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhhhhhhhhhhh
Q 022819 100 KTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS 179 (291)
Q Consensus 100 ~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ 179 (291)
+ . .|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 93 ----------------------~---~------------------~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 129 (319)
T cd08267 93 ----------------------K---G------------------GGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGL 129 (319)
T ss_pred ----------------------C---C------------------CceeeEEEEechhheEECCCCCCHHHHHhhhhHHH
Confidence 0 0 13899999999999999999999999999999999
Q ss_pred hhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHH
Q 022819 180 AGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR 258 (291)
Q Consensus 180 ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~ 258 (291)
+||+++.+...+.++++++|+|+ |++|++++++|+.+|+ +++++..+ ++.+.++++|++.+++.+. .++. ..
T Consensus 130 ~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~~ 202 (319)
T cd08267 130 TALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---AL 202 (319)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---hh
Confidence 99999888888999999999987 9999999999999999 88888764 8888889999888887654 3332 33
Q ss_pred HhcC-CccEEEEccCCh-HHHHHHHHhhccCccc
Q 022819 259 ITDG-GADYSFECIGDT-GMITTALQSCCDVRSI 290 (291)
Q Consensus 259 ~~~g-~~d~vld~~g~~-~~~~~~~~~l~~~G~i 290 (291)
.+.+ ++|++++|+|+. ......+..++++|++
T Consensus 203 ~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~ 236 (319)
T cd08267 203 TAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRY 236 (319)
T ss_pred ccCCCCCcEEEECCCchHHHHHHhhhccCCCCEE
Confidence 4444 899999999852 2333444448888775
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.94 E-value=5.4e-25 Score=194.04 Aligned_cols=196 Identities=22% Similarity=0.341 Sum_probs=174.0
Q ss_pred EEEeEeeCChhhhhhhcccCCCCcccCcceeEEEEEcCCCCCCCCCCCEEEeecccCCCCCccccCCCCCcccccccccc
Q 022819 42 IKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121 (291)
Q Consensus 42 Vkv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~ 121 (291)
||+.++++|+.|...+.+....|.++|+|++|+|+++|+.++.|++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-------------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLPGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-------------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCCCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc--------------------------
Confidence 899999999999999888765578999999999999999999999999996541
Q ss_pred ccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEc
Q 022819 122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFG 201 (291)
Q Consensus 122 g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G 201 (291)
+ |+|++|+.++.+.++++|+++++++++.+.+.+.++|.++.+...+.++++|+|+|
T Consensus 56 -----~------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g 112 (288)
T smart00829 56 -----P------------------GSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHA 112 (288)
T ss_pred -----C------------------CceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEec
Confidence 1 38999999999999999999999999999999999999887888999999999998
Q ss_pred C-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC--ceEeCCCCCCchHHHHHHHHhcC-CccEEEEccCChHHH
Q 022819 202 L-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--TEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMI 277 (291)
Q Consensus 202 ~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~--~~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~ 277 (291)
+ |.+|++++++++.+|+ +++++++++++++.++++|+ +.++++.. .++.+.+.+.+.+ ++|.++|++++ ..+
T Consensus 113 ~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~~~-~~~ 188 (288)
T smart00829 113 AAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD--LSFADEILRATGGRGVDVVLNSLAG-EFL 188 (288)
T ss_pred CCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC--ccHHHHHHHHhCCCCcEEEEeCCCH-HHH
Confidence 5 9999999999999999 89999989999999999998 66777654 5677778777766 89999999996 678
Q ss_pred HHHHHhhccCccc
Q 022819 278 TTALQSCCDVRSI 290 (291)
Q Consensus 278 ~~~~~~l~~~G~i 290 (291)
..+++.++++|++
T Consensus 189 ~~~~~~l~~~g~~ 201 (288)
T smart00829 189 DASLRCLAPGGRF 201 (288)
T ss_pred HHHHHhccCCcEE
Confidence 8899999998875
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.89 E-value=1.2e-21 Score=173.49 Aligned_cols=166 Identities=32% Similarity=0.419 Sum_probs=143.3
Q ss_pred CCCcccCcceeEEEEEcCCCCCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCcccc
Q 022819 62 IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYH 141 (291)
Q Consensus 62 ~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~ 141 (291)
++|.++|+|++|+|+++|+++++|++||+|+.+
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------------- 51 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------------- 51 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------------
Confidence 678999999999999999999999999999654
Q ss_pred ccCccceeeEEEeeccceEECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeE
Q 022819 142 YCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRI 221 (291)
Q Consensus 142 ~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~v 221 (291)
+.|++|+.++.+.++++|+++++.+++.+ ..+.+||+++ ...+++++++++|+|+|++|++++++|+.+|+.+|
T Consensus 52 ----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~v 125 (277)
T cd08255 52 ----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREV 125 (277)
T ss_pred ----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcE
Confidence 26889999999999999999999999988 7899999986 57889999999999889999999999999999439
Q ss_pred EEEcCChhhHHHHHHcC-CceEeCCCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 222 IGVDTNPEKCEKAKAFG-VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 222 i~~~~~~~~~~~a~~~g-~~~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+++++++++.++++++| ++.+++... ..+.+ ++|++||+++....+..++++++++|++
T Consensus 126 i~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~ 186 (277)
T cd08255 126 VGVDPDAARRELAEALGPADPVAADTA----------DEIGGRGADVVIEASGSPSALETALRLLRDRGRV 186 (277)
T ss_pred EEECCCHHHHHHHHHcCCCccccccch----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCCcEE
Confidence 99999999999999998 444443321 11233 8999999999877889999999999876
No 125
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.88 E-value=9.1e-21 Score=163.47 Aligned_cols=223 Identities=24% Similarity=0.299 Sum_probs=173.2
Q ss_pred eeeEEEEecC--CCC----eEEE--Eeec-CCCCCCcEEEEEeEeeCChhhhhhhcccC----CCCcccC----cceeEE
Q 022819 12 TCKAAVAWGA--GQP----LVVE--EVEV-NPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFG----HEASGI 74 (291)
Q Consensus 12 ~~~a~~~~~~--~~~----~~~~--~~~~-~~~~~~eVlVkv~~~~i~~~D~~~~~g~~----~~p~~~G----~e~~G~ 74 (291)
+++.|++-.. +-| +.++ ++++ .++++++|+||.++-+.+|....-+.... -.|..+| ..++|+
T Consensus 3 ~nkqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~k 82 (343)
T KOG1196|consen 3 TNKQVILKNYVTGFPTESDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAK 82 (343)
T ss_pred cccEEEEeccCCCCCccccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEE
Confidence 3466776652 222 4443 3443 45688899999999999987654332221 2334444 378899
Q ss_pred EEEcCCCCCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEe
Q 022819 75 VESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154 (291)
Q Consensus 75 V~~vG~~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 154 (291)
|++ ++.++|++||.| +|+. +|.+|.++
T Consensus 83 Vi~--S~~~~~~~GD~v-----------------------------~g~~----------------------gWeeysii 109 (343)
T KOG1196|consen 83 VID--SGHPNYKKGDLV-----------------------------WGIV----------------------GWEEYSVI 109 (343)
T ss_pred EEe--cCCCCCCcCceE-----------------------------EEec----------------------cceEEEEe
Confidence 999 567889999999 4444 79999998
Q ss_pred ecc--ceEECCC--CCChhhhh-hhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022819 155 HSG--CAVKVSS--IAPLEKIC-LLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP 228 (291)
Q Consensus 155 ~~~--~~~~ip~--~~~~~~aa-~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~ 228 (291)
++. ..++|+. ++++.... ++..+.+|||..+.+....++++||+|-|| |++|..+.|+|+.+|+ .||++..++
T Consensus 110 ~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~ 188 (343)
T KOG1196|consen 110 TPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSK 188 (343)
T ss_pred cCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCCh
Confidence 663 4445544 44443333 356788999999999999999999999986 9999999999999999 999999999
Q ss_pred hhHHHHH-HcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 229 EKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 229 ~~~~~a~-~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
||.++++ ++|.+..+||++ +.+..+++++..+.++|+.||.+|+ .++...+..|+..|||
T Consensus 189 EKv~ll~~~~G~d~afNYK~-e~~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~gri 249 (343)
T KOG1196|consen 189 EKVDLLKTKFGFDDAFNYKE-ESDLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLHGRI 249 (343)
T ss_pred hhhhhhHhccCCccceeccC-ccCHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhccce
Confidence 9999887 579999999986 3488888998777799999999999 7899999999999986
No 126
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.87 E-value=4.1e-22 Score=152.52 Aligned_cols=105 Identities=38% Similarity=0.653 Sum_probs=92.0
Q ss_pred CCcEEEEEeEeeCChhhhhhhccc----CCCCcccCcceeEEEEEcCCCCCCCCCCCEEEeecccCCCCCccccCCCCCc
Q 022819 37 PEEIRIKVVCTSLCRSDITAWETQ----AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNT 112 (291)
Q Consensus 37 ~~eVlVkv~~~~i~~~D~~~~~g~----~~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~ 112 (291)
|+||||||++++||++|++++.+. ...|.++|||++|+|+++|+++++|++||||++.+...|+.|.+|..+.++.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 689999999999999999999983 2889999999999999999999999999999999998999999999999999
Q ss_pred cccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEEC
Q 022819 113 CEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (291)
Q Consensus 113 c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 162 (291)
|+.......+ .+ |+|++|+.++.++++|+
T Consensus 81 c~~~~~~g~~---~~------------------G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLG---LD------------------GGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTS---ST------------------CSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcC---CC------------------CcccCeEEEehHHEEEC
Confidence 9887764443 33 49999999999999975
No 127
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.82 E-value=6.5e-20 Score=179.49 Aligned_cols=204 Identities=21% Similarity=0.193 Sum_probs=172.0
Q ss_pred eEEEEeecC---CCCCCcEEEEEeEeeCChhhhhhhcccC----------CCCcccCcceeEEEEEcCCCCCCCCCCCEE
Q 022819 25 LVVEEVEVN---PPQPEEIRIKVVCTSLCRSDITAWETQA----------IFPRIFGHEASGIVESVGPGVTEFNEGEHV 91 (291)
Q Consensus 25 ~~~~~~~~~---~~~~~eVlVkv~~~~i~~~D~~~~~g~~----------~~p~~~G~e~~G~V~~vG~~~~~~~~GdrV 91 (291)
+++.|-|.. +..++.=+.-|-|+.||+.|+....|+. ...+++|-|++|| .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 445555543 3467788999999999999999988877 2346889999988 4559999
Q ss_pred EeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCccceeeEEEeeccceEECCCCCChhhh
Q 022819 92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI 171 (291)
Q Consensus 92 ~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a 171 (291)
..... .-++++.+.++++++|.+|++..+++|
T Consensus 1499 M~mvp------------------------------------------------AksLATt~l~~rd~lWevP~~WTleeA 1530 (2376)
T KOG1202|consen 1499 MGMVP------------------------------------------------AKSLATTVLASRDFLWEVPSKWTLEEA 1530 (2376)
T ss_pred EEeee------------------------------------------------hhhhhhhhhcchhhhhhCCcccchhhc
Confidence 54311 027889999999999999999999999
Q ss_pred hhhhhhhhhhHhHHHhhcCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCceEeCCC
Q 022819 172 CLLSCGLSAGLGAAWNVADISKGSTVVIF-GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPN 246 (291)
Q Consensus 172 a~~~~~~~ta~~~l~~~~~~~~~~~vlV~-G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~----g~~~~i~~~ 246 (291)
++.++.|+|+||+++.+.+.++|+++||+ |+|++|.+++.+|.+.|+ +|+.+..+.||++++.+. -...+-|.+
T Consensus 1531 stVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSR 1609 (2376)
T KOG1202|consen 1531 STVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSR 1609 (2376)
T ss_pred ccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhcccccc
Confidence 99999999999999999999999999999 569999999999999999 999999999999988653 223344554
Q ss_pred CCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCccc
Q 022819 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 247 ~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
+ .+|-.-+.+.|.| |+|+|+++... +.++..++||+.+|||
T Consensus 1610 d--tsFEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~GRF 1651 (2376)
T KOG1202|consen 1610 D--TSFEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALHGRF 1651 (2376)
T ss_pred c--ccHHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhcCee
Confidence 4 7888889999999 99999999887 6889999999999987
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.47 E-value=2.4e-13 Score=106.74 Aligned_cols=84 Identities=32% Similarity=0.493 Sum_probs=79.5
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcC-CccEEEEccCChHHHHHHHH
Q 022819 204 TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQ 282 (291)
Q Consensus 204 ~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~~~~~~~~~~ 282 (291)
++|++++|+|+.+|+ +||+++++++|+++++++|++.++++++ .++.+++++++++ ++|+||||+|....++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999996 9999999999999999999999999976 7799999999998 99999999998899999999
Q ss_pred hhccCccc
Q 022819 283 SCCDVRSI 290 (291)
Q Consensus 283 ~l~~~G~i 290 (291)
+++++|++
T Consensus 78 ~l~~~G~~ 85 (130)
T PF00107_consen 78 LLRPGGRI 85 (130)
T ss_dssp HEEEEEEE
T ss_pred HhccCCEE
Confidence 99999986
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.01 E-value=3.2e-09 Score=101.02 Aligned_cols=99 Identities=20% Similarity=0.267 Sum_probs=78.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceE-eCCCCC-----------CchHHHHHHH
Q 022819 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDN-----------NEPVQQVIKR 258 (291)
Q Consensus 191 ~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~-i~~~~~-----------~~~~~~~~~~ 258 (291)
..++++|+|+|+|++|+++++.|+.+|+ +|+++|.++++++.++++|++.+ ++..+. ..++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4679999999999999999999999999 89999999999999999999854 555321 1233333333
Q ss_pred H-hc--CCccEEEEccCChH-----H-HHHHHHhhccCccc
Q 022819 259 I-TD--GGADYSFECIGDTG-----M-ITTALQSCCDVRSI 290 (291)
Q Consensus 259 ~-~~--g~~d~vld~~g~~~-----~-~~~~~~~l~~~G~i 290 (291)
. .. +++|+||+|++.+. . .+++++.++++|+|
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvI 281 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVI 281 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEE
Confidence 2 33 37999999999633 5 49999999999986
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.63 E-value=3.4e-07 Score=85.19 Aligned_cols=94 Identities=22% Similarity=0.330 Sum_probs=75.8
Q ss_pred hHHHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhc
Q 022819 183 GAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD 261 (291)
Q Consensus 183 ~~l~~~~~-~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~ 261 (291)
.++.+..+ .-+|++|+|+|+|++|+.+++.++.+|+ +|++++.++.|++.++++|+..+ +. .+.+
T Consensus 190 ~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~~-------~e~v----- 255 (413)
T cd00401 190 DGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-TM-------EEAV----- 255 (413)
T ss_pred HHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-cH-------HHHH-----
Confidence 33444444 3689999999999999999999999999 89999999999999999998432 11 1122
Q ss_pred CCccEEEEccCChHHHHHH-HHhhccCccc
Q 022819 262 GGADYSFECIGDTGMITTA-LQSCCDVRSI 290 (291)
Q Consensus 262 g~~d~vld~~g~~~~~~~~-~~~l~~~G~i 290 (291)
.++|+||+++|.+..+... ++.++++|++
T Consensus 256 ~~aDVVI~atG~~~~i~~~~l~~mk~Ggil 285 (413)
T cd00401 256 KEGDIFVTTTGNKDIITGEHFEQMKDGAIV 285 (413)
T ss_pred cCCCEEEECCCCHHHHHHHHHhcCCCCcEE
Confidence 2589999999998888876 9999999876
No 131
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.39 E-value=2.4e-06 Score=81.41 Aligned_cols=98 Identities=20% Similarity=0.273 Sum_probs=75.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceE-eCCCC-----------CCchHHHHHHHH
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPND-----------NNEPVQQVIKRI 259 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~-i~~~~-----------~~~~~~~~~~~~ 259 (291)
.++++++|+|+|.+|++++++++.+|+ .|++++.++++++.++++|+..+ ++..+ .++++.+..++.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467899999999999999999999999 79999999999999999998763 33211 113444443443
Q ss_pred hc---CCccEEEEcc---CChH---HHHHHHHhhccCccc
Q 022819 260 TD---GGADYSFECI---GDTG---MITTALQSCCDVRSI 290 (291)
Q Consensus 260 ~~---g~~d~vld~~---g~~~---~~~~~~~~l~~~G~i 290 (291)
.. .++|++|+|+ |.+. ..++.++.+++|+.|
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvI 280 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVI 280 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEE
Confidence 33 3799999999 5433 678889999999865
No 132
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.23 E-value=1.3e-07 Score=88.90 Aligned_cols=159 Identities=16% Similarity=0.178 Sum_probs=103.7
Q ss_pred ccCcceeEEEEEcCCCCCCCCCCCEEEeecccCCCCCccccCCCCCccccccccccccccCCcccceeccCCccccccCc
Q 022819 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV 145 (291)
Q Consensus 66 ~~G~e~~G~V~~vG~~~~~~~~GdrV~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 145 (291)
.-|.|+++.+.+|++++.+ +|+..+.+ |+.|..| +..|......... .+
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~g~~---l~------------------ 137 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTVGKV---LE------------------ 137 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCchHH---HH------------------
Confidence 4688999999999998766 56666677 8888888 4556555442221 11
Q ss_pred cceeeEEEeeccceEE---C-CCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeE
Q 022819 146 SSFSEYTVVHSGCAVK---V-SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRI 221 (291)
Q Consensus 146 g~~~~~~~~~~~~~~~---i-p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~v 221 (291)
+.|++++.++. .+.. | +..++...+|.- ...+..+..++++++|+|+|.+|..+++.++..|+.+|
T Consensus 138 ~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~Av~---------la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V 207 (417)
T TIGR01035 138 RLFQKAFSVGK-RVRTETDISAGAVSISSAAVE---------LAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKI 207 (417)
T ss_pred HHHHHHHHHhh-hhhhhcCCCCCCcCHHHHHHH---------HHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEE
Confidence 27888777765 3332 3 223333322211 01233334678999999999999999999999996689
Q ss_pred EEEcCChhhHH-HHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChH
Q 022819 222 IGVDTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 275 (291)
Q Consensus 222 i~~~~~~~~~~-~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~ 275 (291)
++++++.++.+ +++++|.. .+.. .+..+.+ .++|+||+|++.+.
T Consensus 208 ~v~~rs~~ra~~la~~~g~~-~i~~----~~l~~~l-----~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 208 LIANRTYERAEDLAKELGGE-AVKF----EDLEEYL-----AEADIVISSTGAPH 252 (417)
T ss_pred EEEeCCHHHHHHHHHHcCCe-EeeH----HHHHHHH-----hhCCEEEECCCCCC
Confidence 99999888754 66777753 2222 2222222 25899999998754
No 133
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.14 E-value=2.8e-05 Score=72.78 Aligned_cols=95 Identities=23% Similarity=0.334 Sum_probs=71.4
Q ss_pred HhHHHhhcCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHh
Q 022819 182 LGAAWNVADIS-KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT 260 (291)
Q Consensus 182 ~~~l~~~~~~~-~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~ 260 (291)
|.++.+..++. .+++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+. +.+ +.+.+
T Consensus 199 ~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal---- 265 (425)
T PRK05476 199 LDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA---- 265 (425)
T ss_pred HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH----
Confidence 44444443544 89999999999999999999999999 999999988887776666654 221 11111
Q ss_pred cCCccEEEEccCChHHHH-HHHHhhccCccc
Q 022819 261 DGGADYSFECIGDTGMIT-TALQSCCDVRSI 290 (291)
Q Consensus 261 ~g~~d~vld~~g~~~~~~-~~~~~l~~~G~i 290 (291)
.++|+|++++|....+. ..+..+++++.+
T Consensus 266 -~~aDVVI~aTG~~~vI~~~~~~~mK~Gail 295 (425)
T PRK05476 266 -ELGDIFVTATGNKDVITAEHMEAMKDGAIL 295 (425)
T ss_pred -hCCCEEEECCCCHHHHHHHHHhcCCCCCEE
Confidence 26899999999877776 677888888754
No 134
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.12 E-value=8.8e-06 Score=73.59 Aligned_cols=109 Identities=23% Similarity=0.250 Sum_probs=79.3
Q ss_pred cceEECCCCCChhhhhhhhhhhhhhHhHHHhhcCC---CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH-H
Q 022819 157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADI---SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC-E 232 (291)
Q Consensus 157 ~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~---~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~-~ 232 (291)
+..+++|+.+..+.+.... +.+.++.++...... -++.+|+|+|+|.+|..+++.++..|...|++++++.++. +
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 4677889999888877765 666777664333222 4789999999999999999999998877899999988765 6
Q ss_pred HHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHH
Q 022819 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM 276 (291)
Q Consensus 233 ~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~ 276 (291)
+++++|.. +++. .++.+.+ ..+|+||.+++.+..
T Consensus 218 la~~~g~~-~~~~----~~~~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL----DELLELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH----HHHHHHH-----hcCCEEEECCCCCch
Confidence 77888873 3322 2222222 248999999998654
No 135
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.04 E-value=5.1e-05 Score=70.62 Aligned_cols=92 Identities=22% Similarity=0.340 Sum_probs=70.1
Q ss_pred HHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCC
Q 022819 185 AWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGG 263 (291)
Q Consensus 185 l~~~~~-~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~ 263 (291)
+.+..+ .-.+++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...++..|+. +.+ ..+.+ ..
T Consensus 185 i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal-----~~ 250 (406)
T TIGR00936 185 ILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA-----KI 250 (406)
T ss_pred HHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH-----hc
Confidence 334334 3689999999999999999999999999 899998888887777777762 221 11122 25
Q ss_pred ccEEEEccCChHHHHH-HHHhhccCccc
Q 022819 264 ADYSFECIGDTGMITT-ALQSCCDVRSI 290 (291)
Q Consensus 264 ~d~vld~~g~~~~~~~-~~~~l~~~G~i 290 (291)
.|++|+++|....++. .+..+++++.|
T Consensus 251 aDVVItaTG~~~vI~~~~~~~mK~Gail 278 (406)
T TIGR00936 251 GDIFITATGNKDVIRGEHFENMKDGAIV 278 (406)
T ss_pred CCEEEECCCCHHHHHHHHHhcCCCCcEE
Confidence 7999999999887765 78888888764
No 136
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.98 E-value=2.6e-05 Score=65.62 Aligned_cols=110 Identities=15% Similarity=0.179 Sum_probs=80.9
Q ss_pred hhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCceE-e
Q 022819 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF-L 243 (291)
Q Consensus 169 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~~-i 243 (291)
...-++.-+...|. +.+...++++++||-+|+| .|+.++.+|+..+ +|+.+++.++-.+.| +++|...+ +
T Consensus 50 ~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v 124 (209)
T COG2518 50 GCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTV 124 (209)
T ss_pred CCCceecCcHHHHH--HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEE
Confidence 33444444555554 5688899999999999987 7999999999988 899999988754444 55787443 3
Q ss_pred CCCCCCchHHHHHHHHhc-CCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 244 NPNDNNEPVQQVIKRITD-GGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~-g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
...|.... +.. +.||.|+-+.+.+.....++++|++||++
T Consensus 125 ~~gDG~~G-------~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrl 165 (209)
T COG2518 125 RHGDGSKG-------WPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRL 165 (209)
T ss_pred EECCcccC-------CCCCCCcCEEEEeeccCCCCHHHHHhcccCCEE
Confidence 33332222 222 38999999888877889999999999986
No 137
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.96 E-value=0.00013 Score=65.56 Aligned_cols=87 Identities=22% Similarity=0.341 Sum_probs=66.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g 272 (291)
.+++++|+|.|.+|+.+++.++.+|+ +|++++++.++.+.++++|+..+ .. .++ .+.. ..+|+||++++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~~l----~~~l-~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----SEL----AEEV-GKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----HHH----HHHh-CCCCEEEECCC
Confidence 68999999999999999999999999 99999999988888888886432 21 122 2221 26899999988
Q ss_pred ChHHHHHHHHhhccCccc
Q 022819 273 DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 273 ~~~~~~~~~~~l~~~G~i 290 (291)
.....+..++.+++++.|
T Consensus 220 ~~~i~~~~l~~~~~g~vI 237 (296)
T PRK08306 220 ALVLTKEVLSKMPPEALI 237 (296)
T ss_pred hhhhhHHHHHcCCCCcEE
Confidence 654456677778877643
No 138
>PLN02494 adenosylhomocysteinase
Probab=97.95 E-value=8.1e-05 Score=70.09 Aligned_cols=93 Identities=25% Similarity=0.363 Sum_probs=71.6
Q ss_pred HHHhhcCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcC
Q 022819 184 AAWNVADI-SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG 262 (291)
Q Consensus 184 ~l~~~~~~-~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g 262 (291)
++.+..++ -.|++++|+|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+.. .+ ..+.++
T Consensus 243 ~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v~-------leEal~----- 308 (477)
T PLN02494 243 GLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-LT-------LEDVVS----- 308 (477)
T ss_pred HHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-cc-------HHHHHh-----
Confidence 34445444 579999999999999999999999999 8999998887777777777642 11 112222
Q ss_pred CccEEEEccCChHH-HHHHHHhhccCccc
Q 022819 263 GADYSFECIGDTGM-ITTALQSCCDVRSI 290 (291)
Q Consensus 263 ~~d~vld~~g~~~~-~~~~~~~l~~~G~i 290 (291)
.+|++++++|.... ....++.|++++.|
T Consensus 309 ~ADVVI~tTGt~~vI~~e~L~~MK~GAiL 337 (477)
T PLN02494 309 EADIFVTTTGNKDIIMVDHMRKMKNNAIV 337 (477)
T ss_pred hCCEEEECCCCccchHHHHHhcCCCCCEE
Confidence 47999999998765 48899999999765
No 139
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=97.93 E-value=1.8e-05 Score=70.09 Aligned_cols=95 Identities=25% Similarity=0.348 Sum_probs=67.6
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHHc----CCceEeCCCCCCchHHHHHHHH--h
Q 022819 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRI--T 260 (291)
Q Consensus 188 ~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~-~vi~~~~~~~~~~~a~~~----g~~~~i~~~~~~~~~~~~~~~~--~ 260 (291)
...++++++||.+|+|+ |..++++++..|.. +|++++.+++.++.+++. +...+.... .+ +.++ .
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d----~~~l~~~ 143 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GE----IEALPVA 143 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cc----hhhCCCC
Confidence 45678999999999987 88888888887752 799999999999988763 332211110 11 1222 2
Q ss_pred cCCccEEEEcc------CChHHHHHHHHhhccCccc
Q 022819 261 DGGADYSFECI------GDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 261 ~g~~d~vld~~------g~~~~~~~~~~~l~~~G~i 290 (291)
++.||+|+... .....++.+.+.|++||+|
T Consensus 144 ~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l 179 (272)
T PRK11873 144 DNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRF 179 (272)
T ss_pred CCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEE
Confidence 34799888543 2356799999999999986
No 140
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.86 E-value=0.00023 Score=62.35 Aligned_cols=115 Identities=19% Similarity=0.213 Sum_probs=74.4
Q ss_pred eccceEECCCCCChhhhhhhhhhhhhhHhHHHhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 022819 155 HSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK 233 (291)
Q Consensus 155 ~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~ 233 (291)
+...++.+++++.+..+..-. |.. ++... ....++++||.+|+|. |..++.+++ .|..+|+++|.++...+.
T Consensus 85 ~~~~~i~i~p~~afgtg~h~t----t~~-~l~~l~~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis~~~l~~ 157 (250)
T PRK00517 85 PDEINIELDPGMAFGTGTHPT----TRL-CLEALEKLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDIDPQAVEA 157 (250)
T ss_pred CCeEEEEECCCCccCCCCCHH----HHH-HHHHHHhhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECCHHHHHH
Confidence 556778899888877655322 221 12111 1256889999999986 877776554 677579999999998887
Q ss_pred HHHc----CCceEeCCCCCCchHHHHHHHHhcC--CccEEEEccCCh---HHHHHHHHhhccCccc
Q 022819 234 AKAF----GVTEFLNPNDNNEPVQQVIKRITDG--GADYSFECIGDT---GMITTALQSCCDVRSI 290 (291)
Q Consensus 234 a~~~----g~~~~i~~~~~~~~~~~~~~~~~~g--~~d~vld~~g~~---~~~~~~~~~l~~~G~i 290 (291)
+++. +....+. +..+ .||+|+-+.... ..+..+.+.|+++|++
T Consensus 158 A~~n~~~~~~~~~~~--------------~~~~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~l 209 (250)
T PRK00517 158 ARENAELNGVELNVY--------------LPQGDLKADVIVANILANPLLELAPDLARLLKPGGRL 209 (250)
T ss_pred HHHHHHHcCCCceEE--------------EccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEE
Confidence 7652 2211010 0111 589998766542 3467788889999975
No 141
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.77 E-value=5e-05 Score=74.25 Aligned_cols=81 Identities=21% Similarity=0.278 Sum_probs=59.6
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---------------------hhhHHHHHHcCCceEeCCCCC
Q 022819 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN---------------------PEKCEKAKAFGVTEFLNPNDN 248 (291)
Q Consensus 190 ~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~---------------------~~~~~~a~~~g~~~~i~~~~~ 248 (291)
...++++|+|+|+|+.|+++++.++.+|+ +|++++.. +.+++.++++|++..++....
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 35789999999999999999999999999 78888742 356778888998877765321
Q ss_pred CchHHHHHHHHhcCCccEEEEccCChH
Q 022819 249 NEPVQQVIKRITDGGADYSFECIGDTG 275 (291)
Q Consensus 249 ~~~~~~~~~~~~~g~~d~vld~~g~~~ 275 (291)
.+-..+.+. .++|+||+++|...
T Consensus 212 ~~~~~~~~~----~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 EDITLEQLE----GEFDAVFVAIGAQL 234 (564)
T ss_pred CcCCHHHHH----hhCCEEEEeeCCCC
Confidence 111111221 26899999999754
No 142
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.67 E-value=0.00064 Score=64.26 Aligned_cols=92 Identities=25% Similarity=0.395 Sum_probs=67.7
Q ss_pred HHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCC
Q 022819 185 AWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGG 263 (291)
Q Consensus 185 l~~~~~-~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~ 263 (291)
+.+..+ .-.|++++|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+.. . ++.+.+ ..
T Consensus 244 ~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~-------~leell-----~~ 309 (476)
T PTZ00075 244 IFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V-------TLEDVV-----ET 309 (476)
T ss_pred HHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c-------cHHHHH-----hc
Confidence 344433 3479999999999999999999999999 8999988777665555555431 1 122222 25
Q ss_pred ccEEEEccCChHHHH-HHHHhhccCccc
Q 022819 264 ADYSFECIGDTGMIT-TALQSCCDVRSI 290 (291)
Q Consensus 264 ~d~vld~~g~~~~~~-~~~~~l~~~G~i 290 (291)
+|+|+.++|....+. ..++.|++++.|
T Consensus 310 ADIVI~atGt~~iI~~e~~~~MKpGAiL 337 (476)
T PTZ00075 310 ADIFVTATGNKDIITLEHMRRMKNNAIV 337 (476)
T ss_pred CCEEEECCCcccccCHHHHhccCCCcEE
Confidence 899999999877764 888899998764
No 143
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.62 E-value=0.00011 Score=69.28 Aligned_cols=89 Identities=21% Similarity=0.301 Sum_probs=62.4
Q ss_pred hhhhhHhHHHhhcC---CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHHcCCceEeCCCCCCchH
Q 022819 177 GLSAGLGAAWNVAD---ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAFGVTEFLNPNDNNEPV 252 (291)
Q Consensus 177 ~~~ta~~~l~~~~~---~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~-~a~~~g~~~~i~~~~~~~~~ 252 (291)
+.+.++.++..... -.++++|+|+|+|.+|..+++.++..|+..|+++.++.++.+ +++++|.. +++. .+.
T Consensus 162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~----~~~ 236 (423)
T PRK00045 162 AVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL----DEL 236 (423)
T ss_pred CcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH----HHH
Confidence 44555555432222 257899999999999999999999999878999999888855 67777753 3322 122
Q ss_pred HHHHHHHhcCCccEEEEccCChH
Q 022819 253 QQVIKRITDGGADYSFECIGDTG 275 (291)
Q Consensus 253 ~~~~~~~~~g~~d~vld~~g~~~ 275 (291)
.+.+ ..+|+||++++.+.
T Consensus 237 ~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 237 PEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred HHHh-----ccCCEEEECCCCCC
Confidence 1222 26899999999754
No 144
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.62 E-value=0.0003 Score=65.17 Aligned_cols=91 Identities=20% Similarity=0.195 Sum_probs=62.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEcc
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~ 271 (291)
++.+|+|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+. .++......... ..+ +.+.. ..+|++++++
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-~~~----l~~~l-~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-AYE----IEDAV-KRADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-HHH----HHHHH-ccCCEEEEcc
Confidence 34569999999999999999999999 8999999988877665 455432222221 122 22222 2689999997
Q ss_pred C---C--hH-HHHHHHHhhccCccc
Q 022819 272 G---D--TG-MITTALQSCCDVRSI 290 (291)
Q Consensus 272 g---~--~~-~~~~~~~~l~~~G~i 290 (291)
+ . +. ..++.++.+++++.|
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g~vI 263 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPGAVI 263 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCCCEE
Confidence 3 2 21 236777778877654
No 145
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.45 E-value=0.00099 Score=57.28 Aligned_cols=79 Identities=22% Similarity=0.329 Sum_probs=60.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCC----ceEeCCCCCCchHHHHHHHHhcC--Cc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV----TEFLNPNDNNEPVQQVIKRITDG--GA 264 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~----~~~i~~~~~~~~~~~~~~~~~~g--~~ 264 (291)
+++.++|.|+ +++|.++++.+...|+ +|+.++++.++++.+ .+++. ...+|..+ .......+..+... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence 4578899998 8999999999999999 999999999998866 46772 22455554 23444455555444 79
Q ss_pred cEEEEccCC
Q 022819 265 DYSFECIGD 273 (291)
Q Consensus 265 d~vld~~g~ 273 (291)
|+.+++.|.
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999999886
No 146
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.44 E-value=0.0012 Score=59.04 Aligned_cols=85 Identities=18% Similarity=0.310 Sum_probs=60.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g 272 (291)
.+++++|+|.|.+|.+++..++.+|+ +|+++++++++.+.+.++|... +.. .++.+.+ ..+|+|+++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~-~~~----~~l~~~l-----~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIP-FPL----NKLEEKV-----AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee-ecH----HHHHHHh-----ccCCEEEECCC
Confidence 57899999999999999999999999 9999999988877777766432 111 1222222 25899999987
Q ss_pred ChHHHHHHHHhhccCc
Q 022819 273 DTGMITTALQSCCDVR 288 (291)
Q Consensus 273 ~~~~~~~~~~~l~~~G 288 (291)
..-.-...++.++++.
T Consensus 219 ~~ii~~~~l~~~k~~a 234 (287)
T TIGR02853 219 ALVLTADVLSKLPKHA 234 (287)
T ss_pred hHHhCHHHHhcCCCCe
Confidence 5322344556666543
No 147
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.40 E-value=0.00089 Score=52.89 Aligned_cols=74 Identities=27% Similarity=0.403 Sum_probs=53.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCc--eEeCCCCCCchHHHHHHHHhcCCccEEE
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVT--EFLNPNDNNEPVQQVIKRITDGGADYSF 268 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~~--~~i~~~~~~~~~~~~~~~~~~g~~d~vl 268 (291)
-++++++|+|+|++|.+++..+..+|+++|+.+.|+.+|.+.+ ++++.. ..+.++ ++.+.+. .+|+|+
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~~~~~-----~~DivI 80 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLEEALQ-----EADIVI 80 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHCHHHH-----TESEEE
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHHHHHh-----hCCeEE
Confidence 3688999999999999999999999998899999998886655 455322 234442 2222222 589999
Q ss_pred EccCCh
Q 022819 269 ECIGDT 274 (291)
Q Consensus 269 d~~g~~ 274 (291)
.+++..
T Consensus 81 ~aT~~~ 86 (135)
T PF01488_consen 81 NATPSG 86 (135)
T ss_dssp E-SSTT
T ss_pred EecCCC
Confidence 998874
No 148
>PRK08324 short chain dehydrogenase; Validated
Probab=97.37 E-value=0.0012 Score=66.17 Aligned_cols=113 Identities=22% Similarity=0.278 Sum_probs=71.7
Q ss_pred ceeeEEEeeccceEECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 022819 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 225 (291)
Q Consensus 147 ~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~ 225 (291)
++++|..++...++.+ +..+.+++..... ......+++++||+|+ |++|+.+++.+...|+ +|+.++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 4566777776666666 5566566542110 0112236789999986 9999999999999999 899999
Q ss_pred CChhhHHHHH-HcCC--c-e--EeCCCCCCchHHHHHHHHh--cCCccEEEEccC
Q 022819 226 TNPEKCEKAK-AFGV--T-E--FLNPNDNNEPVQQVIKRIT--DGGADYSFECIG 272 (291)
Q Consensus 226 ~~~~~~~~a~-~~g~--~-~--~i~~~~~~~~~~~~~~~~~--~g~~d~vld~~g 272 (291)
++.++.+.+. +++. . . ..|..+ .......+.+.. .+++|++|++.|
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 9888766543 3432 1 1 224332 123333333322 247999999998
No 149
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.35 E-value=0.0095 Score=53.48 Aligned_cols=127 Identities=15% Similarity=0.181 Sum_probs=77.7
Q ss_pred ceeeEEEeeccceEECCCCCChhhhhhhhhhhhhhHhHHHhhcC---CCCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeE
Q 022819 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD---ISKGSTVVIFGL-GTVGLSVAQGAK-ARGASRI 221 (291)
Q Consensus 147 ~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~~~~vlV~G~-g~~G~~~i~~a~-~~g~~~v 221 (291)
.|-+|.++..+... .+.....++.+-+ -+.|+|.. .+... .-..+.|||.++ +-.++.++..++ ..+..++
T Consensus 90 ~YN~Y~r~~~d~~y--~~~~e~~~~LlrP-Lf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAY--DPEREDWQMLLRP-LFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCccc--CcchhHHHHHHHH-HHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 45566666544433 1122223333334 56677753 33322 334566777776 777777777777 5555599
Q ss_pred EEEcCChhhHHHHHHcCC-ceEeCCCCCCchHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhcc
Q 022819 222 IGVDTNPEKCEKAKAFGV-TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCD 286 (291)
Q Consensus 222 i~~~~~~~~~~~a~~~g~-~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~ 286 (291)
|++ ++..+.+..+.+|. +.++.|++ |.++....--+++|+.|.......+-+.+++
T Consensus 166 vgl-TS~~N~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d 222 (314)
T PF11017_consen 166 VGL-TSARNVAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGD 222 (314)
T ss_pred EEE-ecCcchhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhh
Confidence 999 46667778888885 66777754 3443334556899999997776666665543
No 150
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.34 E-value=0.0012 Score=61.38 Aligned_cols=102 Identities=16% Similarity=0.129 Sum_probs=70.7
Q ss_pred hhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHH
Q 022819 180 AGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI 259 (291)
Q Consensus 180 ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~ 259 (291)
..+..+.+..+++++++||.+|+| .|..+..+++..|+ +|++++.+++.++.+++......+.... .++. ++
T Consensus 154 ~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~~----~l 225 (383)
T PRK11705 154 AKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDYR----DL 225 (383)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cchh----hc
Confidence 344445677788999999999986 67777888888898 9999999999999988643211111110 1221 11
Q ss_pred hcCCccEEEE-----ccCC---hHHHHHHHHhhccCccc
Q 022819 260 TDGGADYSFE-----CIGD---TGMITTALQSCCDVRSI 290 (291)
Q Consensus 260 ~~g~~d~vld-----~~g~---~~~~~~~~~~l~~~G~i 290 (291)
.+.+|.|+. .+|. +..++.+.+.|+++|++
T Consensus 226 -~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~l 263 (383)
T PRK11705 226 -NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLF 263 (383)
T ss_pred -CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEE
Confidence 347898764 3343 35688899999999975
No 151
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.33 E-value=0.00091 Score=59.82 Aligned_cols=91 Identities=20% Similarity=0.222 Sum_probs=60.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCce-EeCCCCCCchHHHHHHHHhcCCcc
Q 022819 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTE-FLNPNDNNEPVQQVIKRITDGGAD 265 (291)
Q Consensus 191 ~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~----g~~~-~i~~~~~~~~~~~~~~~~~~g~~d 265 (291)
..++++||-+|+|. |..++.+++ +|..+|++++.++...+.+++. +... +.... .+ +.....+.||
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~---~~----~~~~~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL---IY----LEQPIEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe---cc----cccccCCCce
Confidence 45789999999986 777776665 5766999999999888877652 2211 11111 11 1112234799
Q ss_pred EEEEccCCh---HHHHHHHHhhccCccc
Q 022819 266 YSFECIGDT---GMITTALQSCCDVRSI 290 (291)
Q Consensus 266 ~vld~~g~~---~~~~~~~~~l~~~G~i 290 (291)
+|+...... ..+..+.+.|+++|.+
T Consensus 228 lVvan~~~~~l~~ll~~~~~~LkpgG~l 255 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPGGWL 255 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCCcEE
Confidence 998765442 4567778999999976
No 152
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.27 E-value=0.0022 Score=54.01 Aligned_cols=99 Identities=18% Similarity=0.281 Sum_probs=68.0
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCC-ceEeCCCCCCchHHHHHHHHh
Q 022819 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGV-TEFLNPNDNNEPVQQVIKRIT 260 (291)
Q Consensus 187 ~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~----~g~-~~~i~~~~~~~~~~~~~~~~~ 260 (291)
...++.++++|+.+|+|. |..++.+++.++. .+|++++.+++.++.+++ ++. +.+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFTI- 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhhc-
Confidence 446788999999999987 8888899887642 389999999998887643 552 2222111 1222222221
Q ss_pred cCCccEEEEccCC---hHHHHHHHHhhccCccc
Q 022819 261 DGGADYSFECIGD---TGMITTALQSCCDVRSI 290 (291)
Q Consensus 261 ~g~~d~vld~~g~---~~~~~~~~~~l~~~G~i 290 (291)
.+.+|.||...+. ...++.+.+.|+++|++
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~l 141 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRI 141 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEE
Confidence 2379999985543 45688889999999985
No 153
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.23 E-value=0.0026 Score=57.71 Aligned_cols=100 Identities=18% Similarity=0.203 Sum_probs=70.5
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCceEeCCCCCCchHHHHHHHH
Q 022819 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI 259 (291)
Q Consensus 185 l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~----~g~~~~i~~~~~~~~~~~~~~~~ 259 (291)
+.+..+++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.+++ .|.+.+.... .+..+.+..
T Consensus 72 ll~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~~- 146 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVPE- 146 (322)
T ss_pred HHHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhcccc-
Confidence 3455678899999999997 59999999998763 269999999987766654 5654432221 122111111
Q ss_pred hcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 260 TDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 260 ~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
.+.+|+|+.+.+.+.......+.|+++|++
T Consensus 147 -~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~L 176 (322)
T PRK13943 147 -FAPYDVIFVTVGVDEVPETWFTQLKEGGRV 176 (322)
T ss_pred -cCCccEEEECCchHHhHHHHHHhcCCCCEE
Confidence 136999999888766777889999999985
No 154
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.21 E-value=0.0032 Score=52.07 Aligned_cols=98 Identities=17% Similarity=0.203 Sum_probs=67.2
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCceEeCCCCCCchHHHHHHHHhcC
Q 022819 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITDG 262 (291)
Q Consensus 187 ~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~~i~~~~~~~~~~~~~~~~~~g 262 (291)
...++++++.++-+|+| .|..++++++..-..+|++++++++..++. ++||.+.+..... +..+.+..+.
T Consensus 28 s~L~~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g---~Ap~~L~~~~-- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG---DAPEALPDLP-- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec---cchHhhcCCC--
Confidence 45678999988888885 466677888544344999999999988766 4588765433322 2222333221
Q ss_pred CccEEEEccCC--hHHHHHHHHhhccCccc
Q 022819 263 GADYSFECIGD--TGMITTALQSCCDVRSI 290 (291)
Q Consensus 263 ~~d~vld~~g~--~~~~~~~~~~l~~~G~i 290 (291)
.+|.+|-.=|. +..++.++..|+++|+|
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~ggrl 131 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPGGRL 131 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcCCeE
Confidence 58988853332 56799999999999986
No 155
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.96 E-value=0.011 Score=49.26 Aligned_cols=97 Identities=23% Similarity=0.184 Sum_probs=60.8
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceE-eCCCCCCchHHHHHHHHhcC-Ccc
Q 022819 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDG-GAD 265 (291)
Q Consensus 188 ~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~-i~~~~~~~~~~~~~~~~~~g-~~d 265 (291)
...+.++++||.+|+|+-+.+.....+..+..+|++++.++.. +..++..+ .|..+ ....+.+.+.... ++|
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~--~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD--EEVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC--hhHHHHHHHHhCCCCcc
Confidence 3456899999999987666544444444444489999998754 11233221 13222 3334455554544 899
Q ss_pred EEEEcc-----CC------------hHHHHHHHHhhccCccc
Q 022819 266 YSFECI-----GD------------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 266 ~vld~~-----g~------------~~~~~~~~~~l~~~G~i 290 (291)
+|+... |. ...+..+.+.|+++|++
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 142 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNF 142 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEE
Confidence 999521 21 35688889999999986
No 156
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.95 E-value=0.0086 Score=45.67 Aligned_cols=98 Identities=15% Similarity=0.228 Sum_probs=65.0
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCce--EeCCCCCCchHHHHHHHH
Q 022819 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRI 259 (291)
Q Consensus 186 ~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~--~i~~~~~~~~~~~~~~~~ 259 (291)
.....+.++++++-+|+|. |..+..+++..+..++++++.++...+.+++ ++... ++..+. .. .+..
T Consensus 12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~--~~---~~~~- 84 (124)
T TIGR02469 12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA--PE---ALED- 84 (124)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc--cc---cChh-
Confidence 3445667788999999875 8888888887653489999999988877653 34332 221111 11 0111
Q ss_pred hcCCccEEEEccCC---hHHHHHHHHhhccCccc
Q 022819 260 TDGGADYSFECIGD---TGMITTALQSCCDVRSI 290 (291)
Q Consensus 260 ~~g~~d~vld~~g~---~~~~~~~~~~l~~~G~i 290 (291)
....+|+|+-..+. ...++.+.+.|+++|++
T Consensus 85 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~l 118 (124)
T TIGR02469 85 SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRI 118 (124)
T ss_pred hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEE
Confidence 12379998865433 34788999999999986
No 157
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0079 Score=53.14 Aligned_cols=79 Identities=19% Similarity=0.316 Sum_probs=55.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceE-eCCCCCCchHHHHHHH---HhcCCccEE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKR---ITDGGADYS 267 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~-i~~~~~~~~~~~~~~~---~~~g~~d~v 267 (291)
.++++||+|+ |++|..+++.+...|+ +|+++++++++++.+.+.+...+ .|..+ ..++...+.+ ...+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE-PESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC-HHHHHHHHHHHHHHcCCCccEE
Confidence 3578999987 9999999999888999 99999999888877766655432 34433 1223233332 233579999
Q ss_pred EEccCC
Q 022819 268 FECIGD 273 (291)
Q Consensus 268 ld~~g~ 273 (291)
+.+.|.
T Consensus 81 i~~Ag~ 86 (277)
T PRK05993 81 FNNGAY 86 (277)
T ss_pred EECCCc
Confidence 998763
No 158
>PRK04148 hypothetical protein; Provisional
Probab=96.90 E-value=0.013 Score=46.06 Aligned_cols=51 Identities=33% Similarity=0.529 Sum_probs=41.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEe
Q 022819 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (291)
Q Consensus 191 ~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i 243 (291)
..++.+++++|.| .|..++..+..+|. .|+++|.+++..+.+++.+...+.
T Consensus 14 ~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~ 64 (134)
T PRK04148 14 KGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFV 64 (134)
T ss_pred cccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEE
Confidence 3456789999999 88766666668898 999999999999999888765544
No 159
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.90 E-value=0.0067 Score=50.88 Aligned_cols=78 Identities=23% Similarity=0.287 Sum_probs=55.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC---ceEeCCCCCCchHHHH-HHHHhcC--Ccc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV---TEFLNPNDNNEPVQQV-IKRITDG--GAD 265 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~---~~~i~~~~~~~~~~~~-~~~~~~g--~~d 265 (291)
.|.||||.|+ +++|+..++-...+|= +||..++++++++.++..-. ..+.|..+ .+.... +.++-.. ..+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d--~~~~~~lvewLkk~~P~lN 80 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD--RDSRRELVEWLKKEYPNLN 80 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc--hhhHHHHHHHHHhhCCchh
Confidence 4679999965 8999999999999998 99999999999999887432 22455544 332222 2222222 578
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++++.|-
T Consensus 81 vliNNAGI 88 (245)
T COG3967 81 VLINNAGI 88 (245)
T ss_pred eeeecccc
Confidence 99988774
No 160
>PRK06182 short chain dehydrogenase; Validated
Probab=96.89 E-value=0.0081 Score=52.81 Aligned_cols=79 Identities=20% Similarity=0.354 Sum_probs=55.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCce-EeCCCCCCchHHHHHHHHh--cCCccEEE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~-~i~~~~~~~~~~~~~~~~~--~g~~d~vl 268 (291)
++++++|+|+ |.+|..+++.+...|. +|+++++++++++.+...+... ..|..+ .+++.+.+++.. .+++|+++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence 3578999987 9999999999988999 9999999888876665545433 234432 233334444332 24799999
Q ss_pred EccCC
Q 022819 269 ECIGD 273 (291)
Q Consensus 269 d~~g~ 273 (291)
.+.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99884
No 161
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0095 Score=52.40 Aligned_cols=77 Identities=26% Similarity=0.391 Sum_probs=54.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceE-eCCCCCCchHHHHHHHHh--cCCccEEEEc
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSFEC 270 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~-i~~~~~~~~~~~~~~~~~--~g~~d~vld~ 270 (291)
+++||+|+ |++|..+++.+...|+ +|+++++++++.+.+...+...+ .|..+ ...+.+.+.+.. .+++|+++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND-GAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEEEC
Confidence 47899987 9999999999999999 99999998888777666554332 34432 233333333332 2479999999
Q ss_pred cCC
Q 022819 271 IGD 273 (291)
Q Consensus 271 ~g~ 273 (291)
.|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 884
No 162
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.79 E-value=0.014 Score=51.30 Aligned_cols=81 Identities=22% Similarity=0.289 Sum_probs=57.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCce-EeCCCCCCchHHHHHHH-Hh-cC
Q 022819 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE-FLNPNDNNEPVQQVIKR-IT-DG 262 (291)
Q Consensus 192 ~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-----~g~~~-~i~~~~~~~~~~~~~~~-~~-~g 262 (291)
..+.++||.|+ +++|...+..+...|. ++|.+.|+++|++.+.+ .|... ++..|-.+.+-...+.. +- .+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 46789999998 8999999999999999 99999999999886632 23322 33333222443444443 22 22
Q ss_pred -CccEEEEccCC
Q 022819 263 -GADYSFECIGD 273 (291)
Q Consensus 263 -~~d~vld~~g~ 273 (291)
.+|+.+++.|-
T Consensus 83 ~~IdvLVNNAG~ 94 (265)
T COG0300 83 GPIDVLVNNAGF 94 (265)
T ss_pred CcccEEEECCCc
Confidence 79999999885
No 163
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.76 E-value=0.0072 Score=51.21 Aligned_cols=98 Identities=14% Similarity=0.151 Sum_probs=66.0
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCc---eEeCCCCCCchHHHHH
Q 022819 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVI 256 (291)
Q Consensus 185 l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g-~~~vi~~~~~~~~~~~a~~----~g~~---~~i~~~~~~~~~~~~~ 256 (291)
+.+..+++++++||-+|+| .|..+..+++..+ ..+|++++.+++-.+.+++ .+.. .++..+. ... +
T Consensus 64 ~~~~l~~~~~~~VLDiG~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~-~~~----~ 137 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG-KRG----L 137 (205)
T ss_pred HHHhcCCCCCCEEEEECcC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc-ccC----C
Confidence 3456677899999999986 5777777787764 2389999999887776653 3432 1222221 111 1
Q ss_pred HHHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 257 KRITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 257 ~~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
. ..+.+|.|+-+.......+.+.+.|++||++
T Consensus 138 ~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~l 169 (205)
T PRK13944 138 E--KHAPFDAIIVTAAASTIPSALVRQLKDGGVL 169 (205)
T ss_pred c--cCCCccEEEEccCcchhhHHHHHhcCcCcEE
Confidence 1 1247998887666556678888999999986
No 164
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.75 E-value=0.025 Score=48.34 Aligned_cols=79 Identities=25% Similarity=0.371 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHc---CCceEe--CCCCCCchHHHHHHHHh--cCC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF---GVTEFL--NPNDNNEPVQQVIKRIT--DGG 263 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~---g~~~~i--~~~~~~~~~~~~~~~~~--~g~ 263 (291)
++++++|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++ +....+ |..+ .+...+.+++.. .++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4679999987 8999999999999999 899999988876655 222 222233 2222 123333333322 136
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|.++.+.+.
T Consensus 82 id~ii~~ag~ 91 (238)
T PRK05786 82 IDGLVVTVGG 91 (238)
T ss_pred CCEEEEcCCC
Confidence 8999988874
No 165
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.75 E-value=0.002 Score=54.77 Aligned_cols=99 Identities=20% Similarity=0.280 Sum_probs=65.8
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHH----cCCceE-eCCCCCCchHHHHHHH
Q 022819 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKA----FGVTEF-LNPNDNNEPVQQVIKR 258 (291)
Q Consensus 185 l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~-~vi~~~~~~~~~~~a~~----~g~~~~-i~~~~~~~~~~~~~~~ 258 (291)
+.+..+++++++||-+|+| .|+.++-+++..|.. +|+.++..++-.+.+++ ++...+ +...+....+
T Consensus 64 ~l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~------ 136 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGW------ 136 (209)
T ss_dssp HHHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTT------
T ss_pred HHHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcc------
Confidence 4677789999999999886 688888888887753 68999988876665543 455432 2222111111
Q ss_pred HhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 259 ITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 259 ~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
...+.||.|+-+.+.+......+++|++||++
T Consensus 137 ~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrL 168 (209)
T PF01135_consen 137 PEEAPFDRIIVTAAVPEIPEALLEQLKPGGRL 168 (209)
T ss_dssp GGG-SEEEEEESSBBSS--HHHHHTEEEEEEE
T ss_pred ccCCCcCEEEEeeccchHHHHHHHhcCCCcEE
Confidence 11238999999888877788999999999986
No 166
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.75 E-value=0.0058 Score=50.09 Aligned_cols=48 Identities=31% Similarity=0.450 Sum_probs=40.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCce
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~ 241 (291)
++.+|+|+|+|.+|..++.+++.+|+ +++..+...++.+..+..+...
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~ 66 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYF 66 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEE
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCce
Confidence 44789999999999999999999999 9999999999988888877654
No 167
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.013 Score=49.87 Aligned_cols=77 Identities=22% Similarity=0.331 Sum_probs=52.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceE--eCCCCCCchHHHHHHHHhcCCccEEEEcc
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF--LNPNDNNEPVQQVIKRITDGGADYSFECI 271 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~--i~~~~~~~~~~~~~~~~~~g~~d~vld~~ 271 (291)
++++|.|+ |++|...+..+...|+ +|+++++++++.+.+++++...+ .|..+ .++..+.++++..+++|+++.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcC
Confidence 57889987 9999999988888999 99999988877666655532222 23322 23333444444334799999987
Q ss_pred CC
Q 022819 272 GD 273 (291)
Q Consensus 272 g~ 273 (291)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 64
No 168
>PRK08017 oxidoreductase; Provisional
Probab=96.70 E-value=0.014 Score=50.56 Aligned_cols=77 Identities=27% Similarity=0.422 Sum_probs=54.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceE-eCCCCCCchHH---HHHHHHhcCCccEEEE
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQ---QVIKRITDGGADYSFE 269 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~-i~~~~~~~~~~---~~~~~~~~g~~d~vld 269 (291)
++++|+|+ |++|..+++.+...|. +|++++++.++.+.+++.++..+ .|..+ ..... +.+.+...+.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD-PESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeEEEE
Confidence 57999988 9999999999999998 89999999988888777775443 34332 12222 2333323347888888
Q ss_pred ccCC
Q 022819 270 CIGD 273 (291)
Q Consensus 270 ~~g~ 273 (291)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8763
No 169
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.68 E-value=0.016 Score=53.69 Aligned_cols=84 Identities=23% Similarity=0.350 Sum_probs=59.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC---C-ceEeCCCCCCchHHHHHHHHhcCCccEEEEc
Q 022819 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG---V-TEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (291)
Q Consensus 195 ~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g---~-~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~ 270 (291)
.+|||+|+|.+|..+++.+...+-.+|+..+++.++++.+.... . ...+|..+ .+...+.|++ +|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-~~al~~li~~-----~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-VDALVALIKD-----FDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-hHHHHHHHhc-----CCEEEEe
Confidence 47899999999999999988888559999999999998887653 2 22455443 1233333333 5999999
Q ss_pred cCChHHHHHHHHhhc
Q 022819 271 IGDTGMITTALQSCC 285 (291)
Q Consensus 271 ~g~~~~~~~~~~~l~ 285 (291)
.+..... .+++.+.
T Consensus 76 ~p~~~~~-~i~ka~i 89 (389)
T COG1748 76 APPFVDL-TILKACI 89 (389)
T ss_pred CCchhhH-HHHHHHH
Confidence 9985554 4444433
No 170
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.66 E-value=0.018 Score=49.00 Aligned_cols=98 Identities=18% Similarity=0.264 Sum_probs=67.4
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCce--EeCCCCCCchHHHHHH
Q 022819 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIK 257 (291)
Q Consensus 185 l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~----~g~~~--~i~~~~~~~~~~~~~~ 257 (291)
+.+..+++++++||-+|+| .|..+..+++..+. .+|++++.+++-.+.+++ .|... ++.-+. ...+
T Consensus 68 ~~~~l~~~~g~~VLdIG~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~-~~~~----- 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG-TLGY----- 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc-ccCC-----
Confidence 4566778999999999886 57777788887653 389999999988777654 34332 222211 1111
Q ss_pred HHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 258 RITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 258 ~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
...+.||.|+-....+.......+.|++||++
T Consensus 141 -~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~l 172 (212)
T PRK13942 141 -EENAPYDRIYVTAAGPDIPKPLIEQLKDGGIM 172 (212)
T ss_pred -CcCCCcCEEEECCCcccchHHHHHhhCCCcEE
Confidence 11237999887655566778889999999986
No 171
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.011 Score=53.92 Aligned_cols=79 Identities=24% Similarity=0.382 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHH--hcC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRI--TDG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~--i~~~~~~~~~~~~~~~~--~~g 262 (291)
+++++||+|+ |++|.++++.+...|+ +|+.+++++++++.+ ++.|... + .|..+ .++..+.+.+. ..+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhcC
Confidence 5688999987 8999999999999999 899999988876543 3345443 2 23332 12222222222 125
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 172
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.64 E-value=0.016 Score=54.45 Aligned_cols=76 Identities=18% Similarity=0.210 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEc
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK-AKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~-a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~ 270 (291)
-++.+++|+|+|.+|.+++..+...|+..++.+.++.++.+. +.+++...++.+ .+ +.+.. ..+|+||.|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~----~~----l~~~l-~~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL----SE----LPQLI-KKADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH----HH----HHHHh-ccCCEEEEC
Confidence 467899999999999999999999998789999888777544 445542223222 11 22211 258999999
Q ss_pred cCChHH
Q 022819 271 IGDTGM 276 (291)
Q Consensus 271 ~g~~~~ 276 (291)
++.+..
T Consensus 250 T~a~~~ 255 (414)
T PRK13940 250 VNVLEY 255 (414)
T ss_pred cCCCCe
Confidence 998644
No 173
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.63 E-value=0.0042 Score=46.71 Aligned_cols=90 Identities=20% Similarity=0.158 Sum_probs=59.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhhHHHHHHc----CC-ce-EeCCCCCCchHHHHHHHHhcCCcc
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAK-ARGASRIIGVDTNPEKCEKAKAF----GV-TE-FLNPNDNNEPVQQVIKRITDGGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~-~~g~~~vi~~~~~~~~~~~a~~~----g~-~~-~i~~~~~~~~~~~~~~~~~~g~~d 265 (291)
|+++||-+|+| .|..++.+++ ..++ ++++++.+++.++.+++. +. +. .+... ++ .. .......+|
T Consensus 1 p~~~vLDlGcG-~G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~----d~-~~-~~~~~~~~D 72 (112)
T PF12847_consen 1 PGGRVLDLGCG-TGRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG----DA-EF-DPDFLEPFD 72 (112)
T ss_dssp TTCEEEEETTT-TSHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES----CC-HG-GTTTSSCEE
T ss_pred CCCEEEEEcCc-CCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC----cc-cc-CcccCCCCC
Confidence 57899999987 4777888888 4677 999999999998888653 21 11 11111 11 01 111122799
Q ss_pred EEEEcc-CC---h------HHHHHHHHhhccCccc
Q 022819 266 YSFECI-GD---T------GMITTALQSCCDVRSI 290 (291)
Q Consensus 266 ~vld~~-g~---~------~~~~~~~~~l~~~G~i 290 (291)
+|+... .. . ..++.+.+.|++||++
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l 107 (112)
T PF12847_consen 73 LVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRL 107 (112)
T ss_dssp EEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEE
T ss_pred EEEECCCccccccchhHHHHHHHHHHHhcCCCcEE
Confidence 999876 21 1 2378899999999986
No 174
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.021 Score=49.01 Aligned_cols=77 Identities=22% Similarity=0.410 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCce-EeCCCCCCchHHHHHHHHhcCCccEEEE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFE 269 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~~g~~~-~i~~~~~~~~~~~~~~~~~~g~~d~vld 269 (291)
++++++|+|+ |.+|..+++.+...|. +|+.++++.++.+.+. +.+... ..|..+ .......+.. .+++|++|.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~--~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD-DAAIRAALAA--AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC-HHHHHHHHHH--hCCCCEEEE
Confidence 4678999987 8999999999999999 8999988887765543 344332 234332 1122222222 237899999
Q ss_pred ccCC
Q 022819 270 CIGD 273 (291)
Q Consensus 270 ~~g~ 273 (291)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 9875
No 175
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.62 E-value=0.014 Score=56.07 Aligned_cols=74 Identities=23% Similarity=0.284 Sum_probs=55.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEc
Q 022819 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (291)
Q Consensus 191 ~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~ 270 (291)
+.++++|+|+|.|..|++++++++..|+ .|++.|.++++.+.++++|+..+ .... ..+.+ ..+|+|+.+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~~~----~~~~l-----~~~D~VV~S 77 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-STSD----AVQQI-----ADYALVVTS 77 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cCcc----hHhHh-----hcCCEEEEC
Confidence 5578999999999999999999999999 89999987777777777777433 2211 11122 147999999
Q ss_pred cCChH
Q 022819 271 IGDTG 275 (291)
Q Consensus 271 ~g~~~ 275 (291)
.|.+.
T Consensus 78 pGi~~ 82 (488)
T PRK03369 78 PGFRP 82 (488)
T ss_pred CCCCC
Confidence 88753
No 176
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.48 E-value=0.041 Score=45.13 Aligned_cols=84 Identities=21% Similarity=0.337 Sum_probs=56.6
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCC--
Q 022819 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD-- 273 (291)
Q Consensus 197 vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~-- 273 (291)
|+|+|+ |.+|..+++.+...|. +|+++.+++++.+. ..++.. +..+. .+. +.+.+... ++|+||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~-~~~d~--~d~-~~~~~al~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEI-IQGDL--FDP-DSVKAALK-GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEE-EESCT--TCH-HHHHHHHT-TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--cccccc-ceeee--hhh-hhhhhhhh-hcchhhhhhhhhc
Confidence 688997 9999999999999998 99999999998776 333333 22221 122 23333322 79999999984
Q ss_pred --hHHHHHHHHhhccCc
Q 022819 274 --TGMITTALQSCCDVR 288 (291)
Q Consensus 274 --~~~~~~~~~~l~~~G 288 (291)
.......++.++..|
T Consensus 73 ~~~~~~~~~~~a~~~~~ 89 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAG 89 (183)
T ss_dssp THHHHHHHHHHHHHHTT
T ss_pred ccccccccccccccccc
Confidence 233555555555443
No 177
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.026 Score=48.98 Aligned_cols=79 Identities=27% Similarity=0.403 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCceE-eCCCCCCchHHHHHHHHhc--CCccEE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF-LNPNDNNEPVQQVIKRITD--GGADYS 267 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~~~~-i~~~~~~~~~~~~~~~~~~--g~~d~v 267 (291)
++++++|+|+ |++|..+++.+...|+ +|+.+++++++.+.. ++++...+ .|..+ .......+.+... +.+|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD-EDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 5789999987 9999999999999999 899998887766544 34443222 23332 1233333333221 378999
Q ss_pred EEccCC
Q 022819 268 FECIGD 273 (291)
Q Consensus 268 ld~~g~ 273 (291)
+.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 178
>PRK12742 oxidoreductase; Provisional
Probab=96.45 E-value=0.032 Score=47.62 Aligned_cols=77 Identities=19% Similarity=0.322 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH-HHcCCceE-eCCCCCCchHHHHHHHHhcCCccEEE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA-KAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSF 268 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~-~~~~~~~a-~~~g~~~~-i~~~~~~~~~~~~~~~~~~g~~d~vl 268 (291)
+++++||+|+ |++|..+++.+...|+ +|+.+.+ ++++.+.+ ++++...+ .|..+ ...+.+.+.+. +.+|+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~~--~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD-RDAVIDVVRKS--GALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC-HHHHHHHHHHh--CCCcEEE
Confidence 4689999987 9999999999999999 7776644 44444433 44554332 23322 12333333332 4689999
Q ss_pred EccCC
Q 022819 269 ECIGD 273 (291)
Q Consensus 269 d~~g~ 273 (291)
++.|.
T Consensus 81 ~~ag~ 85 (237)
T PRK12742 81 VNAGI 85 (237)
T ss_pred ECCCC
Confidence 99875
No 179
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.44 E-value=0.033 Score=47.59 Aligned_cols=102 Identities=22% Similarity=0.228 Sum_probs=71.1
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCceEeCCCCCCchHHHHHHHHhc
Q 022819 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD 261 (291)
Q Consensus 187 ~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g-~~~vi~~~~~~~~~~~a~~----~g~~~~i~~~~~~~~~~~~~~~~~~ 261 (291)
...+.+..+++|=+|.+ +|+.++.+|..+. -.+++.++.++++.+.|++ .|....+..-.. -+..+.+.+...
T Consensus 53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~~~~ 130 (219)
T COG4122 53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSRLLD 130 (219)
T ss_pred HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHhccC
Confidence 34455678889888864 6888999999886 3389999999999888865 466552211110 245555555444
Q ss_pred CCccEEE-EccC--ChHHHHHHHHhhccCccc
Q 022819 262 GGADYSF-ECIG--DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 262 g~~d~vl-d~~g--~~~~~~~~~~~l~~~G~i 290 (291)
+.||.|| |+-- -+..++.++++|++||-|
T Consensus 131 ~~fDliFIDadK~~yp~~le~~~~lLr~GGli 162 (219)
T COG4122 131 GSFDLVFIDADKADYPEYLERALPLLRPGGLI 162 (219)
T ss_pred CCccEEEEeCChhhCHHHHHHHHHHhCCCcEE
Confidence 6899766 4332 267899999999999965
No 180
>PRK14967 putative methyltransferase; Provisional
Probab=96.43 E-value=0.039 Score=47.28 Aligned_cols=94 Identities=17% Similarity=0.127 Sum_probs=61.5
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCceEeCCCCCCchHHHHHHHHhcCC
Q 022819 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDGG 263 (291)
Q Consensus 188 ~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~~i~~~~~~~~~~~~~~~~~~g~ 263 (291)
...++++++||-.|+|. |..++.+++. +..++++++.+++.++.+++ .+....+.. .++.+. +..+.
T Consensus 31 ~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~----~d~~~~---~~~~~ 101 (223)
T PRK14967 31 AEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR----GDWARA---VEFRP 101 (223)
T ss_pred hcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE----Cchhhh---ccCCC
Confidence 34567889999999986 8888888875 55589999999988876654 343322211 122221 12247
Q ss_pred ccEEEEccCC---------------------------hHHHHHHHHhhccCccc
Q 022819 264 ADYSFECIGD---------------------------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 264 ~d~vld~~g~---------------------------~~~~~~~~~~l~~~G~i 290 (291)
||+|+...+- ...+..+.+.|+++|++
T Consensus 102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l 155 (223)
T PRK14967 102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSL 155 (223)
T ss_pred eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEE
Confidence 9988865210 12456788899999986
No 181
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.38 E-value=0.0058 Score=54.18 Aligned_cols=95 Identities=16% Similarity=0.221 Sum_probs=59.8
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCce--EeCCCCCCchHHHHHHH
Q 022819 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKR 258 (291)
Q Consensus 185 l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~--~i~~~~~~~~~~~~~~~ 258 (291)
+.+.+++++|++||-+|+| -|..++.+|+..|+ +|+++..+++..+++++ .|... .+.. .++ ++
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~----~D~----~~ 123 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL----QDY----RD 123 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE----S-G----GG
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE----eec----cc
Confidence 5688899999999999987 56677788888899 99999999999888754 45321 1111 111 11
Q ss_pred HhcCCccEEEE-----ccCC---hHHHHHHHHhhccCccc
Q 022819 259 ITDGGADYSFE-----CIGD---TGMITTALQSCCDVRSI 290 (291)
Q Consensus 259 ~~~g~~d~vld-----~~g~---~~~~~~~~~~l~~~G~i 290 (291)
+. +.+|.|+. .+|. +..++.+.+.|+|||++
T Consensus 124 ~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~ 162 (273)
T PF02353_consen 124 LP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRL 162 (273)
T ss_dssp ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEE
T ss_pred cC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEE
Confidence 11 16887553 4543 45689999999999985
No 182
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.31 E-value=0.035 Score=50.36 Aligned_cols=80 Identities=19% Similarity=0.297 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-H----cCCce----EeCCCCCCchHHHHHHHHhcC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A----FGVTE----FLNPNDNNEPVQQVIKRITDG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~----~g~~~----~i~~~~~~~~~~~~~~~~~~g 262 (291)
.+++++|+|+ +++|.+.+..+...|+ +|+.+++++++++.+. + .+... ..|..++..+..+.+.+...+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 5789999987 8999999988888899 8999999998876542 2 12111 234432113334445544444
Q ss_pred -CccEEEEccCC
Q 022819 263 -GADYSFECIGD 273 (291)
Q Consensus 263 -~~d~vld~~g~ 273 (291)
.+|+++++.|.
T Consensus 131 ~didilVnnAG~ 142 (320)
T PLN02780 131 LDVGVLINNVGV 142 (320)
T ss_pred CCccEEEEecCc
Confidence 57799998874
No 183
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.032 Score=48.30 Aligned_cols=79 Identities=18% Similarity=0.290 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCc-eEe--CCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFL--NPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~-~~i--~~~~~~~~~~~~~~~~~--~g 262 (291)
++++++|+|+ |.+|..++..+...|+ +|+++.+++++++.+.. .+.. .++ |..+ ..++.+.+.+.. .+
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhcC
Confidence 5789999987 9999999999999999 89999998887654432 1221 222 3322 233434333322 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 78999999884
No 184
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.038 Score=46.89 Aligned_cols=77 Identities=21% Similarity=0.288 Sum_probs=52.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCce-EeCCCCCCchHHHHHHHHhcCCccEEEEccC
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~-~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g 272 (291)
++++|+|+ |.+|..+++.+...|+ +|+.++++.++.+.++..+... ..|..+ ..++...+.+...+.+|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD-PASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEECCC
Confidence 46888886 9999999988888898 8999998888777666665432 233332 123333333332237999999877
Q ss_pred C
Q 022819 273 D 273 (291)
Q Consensus 273 ~ 273 (291)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 5
No 185
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.28 E-value=0.026 Score=45.76 Aligned_cols=89 Identities=20% Similarity=0.336 Sum_probs=55.9
Q ss_pred HhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCc
Q 022819 186 WNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGA 264 (291)
Q Consensus 186 ~~~~~-~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~ 264 (291)
.+..+ .-.+++++|.|-|-+|...++.++.+|+ +|++++.++-+.-.|..-|.... . +.+.. ...
T Consensus 14 ~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v~--------~----~~~a~-~~a 79 (162)
T PF00670_consen 14 MRATNLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEVM--------T----LEEAL-RDA 79 (162)
T ss_dssp HHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EEE-------------HHHHT-TT-
T ss_pred HhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEec--------C----HHHHH-hhC
Confidence 33334 3578999999999999999999999999 99999999877766666565321 1 11211 257
Q ss_pred cEEEEccCChHH-HHHHHHhhccCc
Q 022819 265 DYSFECIGDTGM-ITTALQSCCDVR 288 (291)
Q Consensus 265 d~vld~~g~~~~-~~~~~~~l~~~G 288 (291)
|+++.++|..+. -.+-++.|+++.
T Consensus 80 di~vtaTG~~~vi~~e~~~~mkdga 104 (162)
T PF00670_consen 80 DIFVTATGNKDVITGEHFRQMKDGA 104 (162)
T ss_dssp SEEEE-SSSSSSB-HHHHHHS-TTE
T ss_pred CEEEECCCCccccCHHHHHHhcCCe
Confidence 999999998554 345566777663
No 186
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.035 Score=47.29 Aligned_cols=79 Identities=22% Similarity=0.261 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHHcCCceE-eCCCCCCchHHHHHHHHh--cCCc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGA 264 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~----a~~~g~~~~-i~~~~~~~~~~~~~~~~~--~g~~ 264 (291)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++... ++..+...+ .|..+ ..++.+.+.+.. .+++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence 4789999987 9999999999988899 89999887655322 222333221 23322 133333333322 1378
Q ss_pred cEEEEccCC
Q 022819 265 DYSFECIGD 273 (291)
Q Consensus 265 d~vld~~g~ 273 (291)
|+++.+.|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998774
No 187
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.26 E-value=0.029 Score=46.38 Aligned_cols=46 Identities=46% Similarity=0.702 Sum_probs=37.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g 238 (291)
-.+++|.|+|.|.+|..+++.++.+|+ +|++.+++..........+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~ 79 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFG 79 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccc
Confidence 368999999999999999999999999 9999998887665344433
No 188
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.038 Score=49.36 Aligned_cols=79 Identities=24% Similarity=0.293 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCC--ce-E--eCCCCCCchHHHHHHHHh--cCC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--TE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~--~~-~--i~~~~~~~~~~~~~~~~~--~g~ 263 (291)
+++++||+|+ |++|..+++.+...|+ +|+.+++++++++.+ ++++. .. . .|..+ .++....+.+.. .+.
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999987 8999999999999999 899999988876654 44542 11 1 34332 123333333322 247
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++++.|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999999885
No 189
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.22 E-value=0.01 Score=50.61 Aligned_cols=98 Identities=16% Similarity=0.209 Sum_probs=64.9
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCce--EeCCCCCCchHHHHHH
Q 022819 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIK 257 (291)
Q Consensus 185 l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~----~g~~~--~i~~~~~~~~~~~~~~ 257 (291)
+.+...++++++||-+|+| .|..++.+++..+. .+|++++.+++..+.+++ .|.+. ++..+ ..+...
T Consensus 69 ~~~~l~~~~~~~VLDiG~G-sG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d-----~~~~~~ 142 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTG-SGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD-----GTQGWE 142 (215)
T ss_pred HHHHhCCCCcCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC-----cccCCc
Confidence 4456678899999999886 56667777776553 269999999988777653 44432 22211 100000
Q ss_pred HHhcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 258 RITDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 258 ~~~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
....||.|+-....+.......+.|++||++
T Consensus 143 --~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~l 173 (215)
T TIGR00080 143 --PLAPYDRIYVTAAGPKIPEALIDQLKEGGIL 173 (215)
T ss_pred --ccCCCCEEEEcCCcccccHHHHHhcCcCcEE
Confidence 1137998876555556677888999999986
No 190
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.20 E-value=0.06 Score=46.89 Aligned_cols=81 Identities=20% Similarity=0.308 Sum_probs=52.9
Q ss_pred CCCCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCce--Ee--CCCCCCchHHHHHHHH
Q 022819 191 ISKGSTVVIFGL-G-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE--FL--NPNDNNEPVQQVIKRI 259 (291)
Q Consensus 191 ~~~~~~vlV~G~-g-~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-----~g~~~--~i--~~~~~~~~~~~~~~~~ 259 (291)
+.+++++||+|+ | ++|.++++.+...|+ +|+.+++++++++...+ ++... .+ |..+ .++....+.+.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHH
Confidence 345789999986 6 799999999999999 89988888776654422 34322 22 3322 12233333322
Q ss_pred h--cCCccEEEEccCC
Q 022819 260 T--DGGADYSFECIGD 273 (291)
Q Consensus 260 ~--~g~~d~vld~~g~ 273 (291)
. .+.+|+++.+.|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 1 2478999999984
No 191
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.19 E-value=0.054 Score=45.77 Aligned_cols=35 Identities=31% Similarity=0.411 Sum_probs=31.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
.+.+|+|+|+|++|..+++.+..+|..++..+|.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45679999999999999999999999889999876
No 192
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.038 Score=48.26 Aligned_cols=79 Identities=14% Similarity=0.199 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCce-E--eCCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~-~--i~~~~~~~~~~~~~~~~~--~g 262 (291)
+++++||.|+ |++|..+++.+...|+ +|+.+++++++.+.+.+ .+... + .|..+ .....+.+.+.. .+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5788999987 8999999999999999 99999998876554322 23222 2 23332 122323333321 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 193
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.17 E-value=0.042 Score=47.92 Aligned_cols=79 Identities=20% Similarity=0.268 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCc-eEe--CCCCCCchHHHHHHHHh--cCCcc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT-EFL--NPNDNNEPVQQVIKRIT--DGGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~g~~-~~i--~~~~~~~~~~~~~~~~~--~g~~d 265 (291)
+++++||.|+ +++|..+++.+...|+ +|+.+++++++.+.+.+ ++.. ..+ |..+ ..+....+.+.. .+.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence 4678999987 8999999999999999 89999998887766543 3321 122 3222 123333333332 24799
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99999884
No 194
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.16 E-value=0.031 Score=53.49 Aligned_cols=78 Identities=23% Similarity=0.366 Sum_probs=55.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHHHHcCCceEeCCCCCCch
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP---------------------EKCEKAKAFGVTEFLNPNDNNEP 251 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~---------------------~~~~~a~~~g~~~~i~~~~~~~~ 251 (291)
.+++|+|+|+|+.|+.++..++.+|. .|+.++..+ ...++++++|++..++.... .+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG-RD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC-Cc
Confidence 57899999999999999999999999 788887653 24567788898766554321 11
Q ss_pred HHHHHHHHhcCCccEEEEccCChH
Q 022819 252 VQQVIKRITDGGADYSFECIGDTG 275 (291)
Q Consensus 252 ~~~~~~~~~~g~~d~vld~~g~~~ 275 (291)
+ .+.++. ..+|.||.++|...
T Consensus 218 ~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 218 I--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred c--CHHHHH-hcCCEEEEEeCCCC
Confidence 1 112221 26999999999743
No 195
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.047 Score=46.63 Aligned_cols=79 Identities=24% Similarity=0.337 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcC---CceEe--CCCCCCchHHHHHHHHhc--CC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFG---VTEFL--NPNDNNEPVQQVIKRITD--GG 263 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g---~~~~i--~~~~~~~~~~~~~~~~~~--g~ 263 (291)
.+.+++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +++. ....+ |..+ ..++.+.+++... ++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD-EADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 4688999987 9999999998888899 899999888766544 3332 11222 3322 2334444443322 37
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|++|.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 8999998764
No 196
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.039 Score=47.87 Aligned_cols=83 Identities=20% Similarity=0.223 Sum_probs=54.1
Q ss_pred cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCc--eEe--CCCCCCchHHHHHHHHh--
Q 022819 189 ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT--EFL--NPNDNNEPVQQVIKRIT-- 260 (291)
Q Consensus 189 ~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~g~~--~~i--~~~~~~~~~~~~~~~~~-- 260 (291)
...-++.++||+|+ |.+|..++..+...|. +|+.+++++++.+.+.+ ..-. ..+ |..+ +......+.+..
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 83 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVER 83 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHH
Confidence 34457789999987 9999999999999999 89999988776655433 2211 222 3322 122322233221
Q ss_pred cCCccEEEEccCC
Q 022819 261 DGGADYSFECIGD 273 (291)
Q Consensus 261 ~g~~d~vld~~g~ 273 (291)
.+++|+|+.+.|.
T Consensus 84 ~~~~d~vi~~ag~ 96 (264)
T PRK12829 84 FGGLDVLVNNAGI 96 (264)
T ss_pred hCCCCEEEECCCC
Confidence 1479999998875
No 197
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.14 E-value=0.041 Score=47.98 Aligned_cols=79 Identities=20% Similarity=0.236 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCce-E--eCCCCCCchHHHHHHHHhc--CCcc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTE-F--LNPNDNNEPVQQVIKRITD--GGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~-g~~~-~--i~~~~~~~~~~~~~~~~~~--g~~d 265 (291)
++++++|.|+ |++|..+++.+...|+ +|+.+++++++.+.+++. +... . .|..+ ..+..+.+.+... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 4688999987 8999999999999999 899999888776665543 3211 2 23322 1223333333322 4789
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 82 ~li~~Ag~ 89 (262)
T TIGR03325 82 CLIPNAGI 89 (262)
T ss_pred EEEECCCC
Confidence 99999873
No 198
>PLN02476 O-methyltransferase
Probab=96.11 E-value=0.049 Score=48.35 Aligned_cols=102 Identities=17% Similarity=0.144 Sum_probs=67.8
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCceEeCCCCCCchHHHHHHHHh
Q 022819 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT 260 (291)
Q Consensus 186 ~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~----~g~~~~i~~~~~~~~~~~~~~~~~ 260 (291)
....+..+.++||=+|.+ +|..++.+|+.++. .+++.++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 111 ~~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l~ 187 (278)
T PLN02476 111 AMLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSMI 187 (278)
T ss_pred HHHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHH
Confidence 444566778999999874 67788888887742 279999999998887754 46543222211 33444454432
Q ss_pred ----cCCccEEEEccCC---hHHHHHHHHhhccCccc
Q 022819 261 ----DGGADYSFECIGD---TGMITTALQSCCDVRSI 290 (291)
Q Consensus 261 ----~g~~d~vld~~g~---~~~~~~~~~~l~~~G~i 290 (291)
.+.||.||--... ...++.++++|++||.|
T Consensus 188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvI 224 (278)
T PLN02476 188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVI 224 (278)
T ss_pred hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEE
Confidence 2379976643332 46688999999999975
No 199
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.046 Score=47.28 Aligned_cols=79 Identities=22% Similarity=0.265 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCce--E--eCCCCCCchHHHHHHHHh--cCCcc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~--~--i~~~~~~~~~~~~~~~~~--~g~~d 265 (291)
+++++||+|+ |.+|..+++.+...|+ +|+.+.++++..+.+.++.... . .|..+ ..++...+.+.. .+++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4679999987 9999999999988999 8999988877655554442211 2 23322 123333333321 13789
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99999885
No 200
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.04 E-value=0.081 Score=45.47 Aligned_cols=79 Identities=29% Similarity=0.352 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHhc--C
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~--i~~~~~~~~~~~~~~~~~~--g 262 (291)
+++++||.|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.+... . .|..+ .....+.+..... +
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4788999987 9999999999999998 899998887765443 2234332 2 23222 1233333333322 4
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
++|.+|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (253)
T PRK08217 82 QLNGLINNAGI 92 (253)
T ss_pred CCCEEEECCCc
Confidence 78999998873
No 201
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=96.04 E-value=0.0011 Score=51.35 Aligned_cols=45 Identities=16% Similarity=0.343 Sum_probs=31.6
Q ss_pred cCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccC--ChHHHHHHHHhhccCccc
Q 022819 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG--DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 237 ~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g--~~~~~~~~~~~l~~~G~i 290 (291)
||+++++|++. .++ ...+++|+|||++| ++..+..++++| ++|++
T Consensus 1 LGAd~vidy~~--~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~ 47 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRV 47 (127)
T ss_dssp CT-SEEEETTC--SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEE
T ss_pred CCcCEEecCCC--ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEE
Confidence 68999999975 655 22349999999999 655557777788 88875
No 202
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.052 Score=47.86 Aligned_cols=79 Identities=23% Similarity=0.276 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCc-e-E--eCCCCCCchHHHHHHHHhc--CCcc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-E-F--LNPNDNNEPVQQVIKRITD--GGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~-~-~--i~~~~~~~~~~~~~~~~~~--g~~d 265 (291)
.++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+.+.... . . .|..+ .......+++... +++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 3578999987 9999999999988999 899999988877665543221 1 2 23332 1233333333221 3689
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999885
No 203
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.03 E-value=0.065 Score=47.84 Aligned_cols=42 Identities=26% Similarity=0.384 Sum_probs=37.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a 234 (291)
.+++++|+|+|+.|.+++..+..+|+.+|+.++++.+|.+.+
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 467899999999999999999999998899999998876654
No 204
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.03 E-value=0.085 Score=44.15 Aligned_cols=100 Identities=13% Similarity=0.156 Sum_probs=58.7
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCceEeCCCCCCchHHHHHHHHhc
Q 022819 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD 261 (291)
Q Consensus 186 ~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~~i~~~~~~~~~~~~~~~~~~ 261 (291)
....++.++++||-+|+| .|..++.+++.....+|++++.+++..+.+++ ++...+.... .+..+.+..+.
T Consensus 33 ~~~l~~~~~~~VLDiG~G-~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~~- 107 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAG-TGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQLA- 107 (196)
T ss_pred HHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhCC-
Confidence 344567788999888775 34455556655432399999999988877754 4543221111 11111222221
Q ss_pred CCcc-EEEEccCC-hHHHHHHHHhhccCccc
Q 022819 262 GGAD-YSFECIGD-TGMITTALQSCCDVRSI 290 (291)
Q Consensus 262 g~~d-~vld~~g~-~~~~~~~~~~l~~~G~i 290 (291)
..+| ++++.... ...++.+.+.|++||++
T Consensus 108 ~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~l 138 (196)
T PRK07402 108 PAPDRVCIEGGRPIKEILQAVWQYLKPGGRL 138 (196)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHhcCCCeEE
Confidence 2234 44543222 46788899999999986
No 205
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=96.00 E-value=0.053 Score=46.93 Aligned_cols=102 Identities=18% Similarity=0.133 Sum_probs=66.3
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCceEeCCCCCCchHHHHHHHHh
Q 022819 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT 260 (291)
Q Consensus 186 ~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g-~~~vi~~~~~~~~~~~a~~----~g~~~~i~~~~~~~~~~~~~~~~~ 260 (291)
....+..+.++||-+|.| .|..++.+++.++ ..++++++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 61 ~~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~--gda~~~L~~l~ 137 (234)
T PLN02781 61 SMLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ--SDALSALDQLL 137 (234)
T ss_pred HHHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHH
Confidence 344556678899999875 5777777777663 3499999999998887765 35432121111 23344444442
Q ss_pred ----cCCccEEEEccC---ChHHHHHHHHhhccCccc
Q 022819 261 ----DGGADYSFECIG---DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 261 ----~g~~d~vld~~g---~~~~~~~~~~~l~~~G~i 290 (291)
.+.||+||--.. -...++.+++.+++||.|
T Consensus 138 ~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~i 174 (234)
T PLN02781 138 NNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGII 174 (234)
T ss_pred hCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEE
Confidence 237998875432 246788899999999975
No 206
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.05 Score=47.07 Aligned_cols=74 Identities=19% Similarity=0.189 Sum_probs=49.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCce-E--eCCCCCCchHHHHHHHHhcCCcc
Q 022819 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRITDGGAD 265 (291)
Q Consensus 194 ~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~-~--i~~~~~~~~~~~~~~~~~~g~~d 265 (291)
++++||.|+ |.+|..+++.+...|+ +|+++.+++++.+.+++ .+... + .|..+ . +.+.....+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~---~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD--A---IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC--H---HHHHHHhcCCCC
Confidence 457999987 9999999999999999 89999887766554432 23222 2 23322 2 223333334899
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
++|.+.|.
T Consensus 76 ~vi~~ag~ 83 (257)
T PRK09291 76 VLLNNAGI 83 (257)
T ss_pred EEEECCCc
Confidence 99998873
No 207
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=95.97 E-value=0.06 Score=52.40 Aligned_cols=48 Identities=17% Similarity=0.168 Sum_probs=39.9
Q ss_pred HhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022819 186 WNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (291)
Q Consensus 186 ~~~~~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a 234 (291)
-...+.+.++++||+|+ |.+|..+++.+...|. +|++++++.++.+.+
T Consensus 72 ~~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 72 PKELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred ccccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 34456678999999987 9999999999988998 899998988876543
No 208
>PLN02366 spermidine synthase
Probab=95.96 E-value=0.074 Score=48.01 Aligned_cols=99 Identities=14% Similarity=0.094 Sum_probs=62.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCC-----CchHHHHHHHHhcCCcc
Q 022819 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN-----NEPVQQVIKRITDGGAD 265 (291)
Q Consensus 191 ~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~-----~~~~~~~~~~~~~g~~d 265 (291)
..+.++||++|+|. |..+..+++.-+..+|.+++.+++-.+.++++-...-...++. ..+..+.+++...+.+|
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD 167 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD 167 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence 35678999998764 5556677777666689999999888888877411100000000 03344455543344799
Q ss_pred EEEEccCC----------hHHHHHHHHhhccCccc
Q 022819 266 YSFECIGD----------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 266 ~vld~~g~----------~~~~~~~~~~l~~~G~i 290 (291)
+||--... .+.++.+.+.|+++|.+
T Consensus 168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvl 202 (308)
T PLN02366 168 AIIVDSSDPVGPAQELFEKPFFESVARALRPGGVV 202 (308)
T ss_pred EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEE
Confidence 77653222 34688899999999976
No 209
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.96 E-value=0.041 Score=54.80 Aligned_cols=76 Identities=25% Similarity=0.330 Sum_probs=55.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHHcCCceEeCCCCCC-c
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE---------------------KCEKAKAFGVTEFLNPNDNN-E 250 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~---------------------~~~~a~~~g~~~~i~~~~~~-~ 250 (291)
.+++|+|+|+|+.|+.++..++.+|. .|++++..+. +.++++++|++..++..-.. .
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 47999999999999999999999999 7888876652 45677888887666553211 1
Q ss_pred hHHHHHHHHhcCCccEEEEccCCh
Q 022819 251 PVQQVIKRITDGGADYSFECIGDT 274 (291)
Q Consensus 251 ~~~~~~~~~~~g~~d~vld~~g~~ 274 (291)
.+ .++. ..+|.||.++|..
T Consensus 388 ~~----~~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TF----SDLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CH----HHHH-hcCCEEEEeCCCC
Confidence 22 2221 2689999999973
No 210
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.95 E-value=0.045 Score=47.06 Aligned_cols=79 Identities=22% Similarity=0.328 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcC--Cce-Ee--CCCCCCchHHHHHHHHh--cCC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFG--VTE-FL--NPNDNNEPVQQVIKRIT--DGG 263 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~~g--~~~-~i--~~~~~~~~~~~~~~~~~--~g~ 263 (291)
+++++||+|+ |.+|..+++.+...|. +|+.+++++++.+.+. .+. ... .+ |..+ ..++...+.+.. .+.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4578999987 9999999999989999 7999999887765442 222 111 22 3222 233333333321 237
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 8999998875
No 211
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.071 Score=47.62 Aligned_cols=79 Identities=19% Similarity=0.349 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCce-Ee--CCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~----~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g 262 (291)
.+++++|+|+ |++|...++.+...|+ +|++++++.++.+.+. +.+... ++ |..+ .++..+.+.+.. .+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 3578999987 9999999999988999 9999999887765442 223322 22 3322 123333333221 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 78999999875
No 212
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.071 Score=46.70 Aligned_cols=79 Identities=23% Similarity=0.337 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc----CCce-E--eCCCCCCchHHHHHHHHh-cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF----GVTE-F--LNPNDNNEPVQQVIKRIT-DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~~----g~~~-~--i~~~~~~~~~~~~~~~~~-~g 262 (291)
+++++||.|+ +++|.++++.+...|+ +|+.+++++++++.+. ++ +... . .|..+ ..+..+.+.+.. .+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhhC
Confidence 4788999987 8999999999999999 8999998887765443 22 3221 2 23332 233333333322 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
++|+++.+.|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 79999998875
No 213
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.91 E-value=0.056 Score=46.53 Aligned_cols=92 Identities=17% Similarity=0.196 Sum_probs=61.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCce--EeCCCCCCchHHHHHHHHhcCCccEEEE
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--FLNPNDNNEPVQQVIKRITDGGADYSFE 269 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~--~i~~~~~~~~~~~~~~~~~~g~~d~vld 269 (291)
-++.+||-+|+| .|++..-+|+ +|+ .|.++|-+++..+.++...... -++|. ....+.+.+. ++.||+|+.
T Consensus 58 l~g~~vLDvGCG-gG~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~---~~~~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCG-GGILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYR---QATVEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCC-ccHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccch---hhhHHHHHhc-CCCccEEEE
Confidence 478899999985 2555555555 477 9999999999999998643222 24453 2222232221 148999875
Q ss_pred -----ccCCh-HHHHHHHHhhccCccc
Q 022819 270 -----CIGDT-GMITTALQSCCDVRSI 290 (291)
Q Consensus 270 -----~~g~~-~~~~~~~~~l~~~G~i 290 (291)
-+..+ ..+..+.++++|+|.+
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~G~l 157 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPGGIL 157 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCCcEE
Confidence 44443 4688899999999975
No 214
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.90 E-value=0.14 Score=38.78 Aligned_cols=73 Identities=27% Similarity=0.415 Sum_probs=52.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCCh
Q 022819 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (291)
Q Consensus 197 vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~ 274 (291)
|+|.|.|.+|...++.++..+. .+++++.++++.+.+++.|...+. -+. .-.+.+++..-..++.++-+++..
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~i~-gd~---~~~~~l~~a~i~~a~~vv~~~~~d 73 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEVIY-GDA---TDPEVLERAGIEKADAVVILTDDD 73 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEEEE-S-T---TSHHHHHHTTGGCESEEEEESSSH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccccc-ccc---hhhhHHhhcCccccCEEEEccCCH
Confidence 5788999999999999999775 899999999999999998855333 221 222344444333788888887764
No 215
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.075 Score=46.58 Aligned_cols=78 Identities=23% Similarity=0.283 Sum_probs=52.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCceE--eCCCCCCchHHHHHHHHh--cCCccEE
Q 022819 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRIT--DGGADYS 267 (291)
Q Consensus 194 ~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~~~~--i~~~~~~~~~~~~~~~~~--~g~~d~v 267 (291)
+.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++++.... .|..+ .+++.+.+.+.. .+++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD-PASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 578999987 9999999998888999 888888888876654 34441222 24332 233333333332 2478999
Q ss_pred EEccCC
Q 022819 268 FECIGD 273 (291)
Q Consensus 268 ld~~g~ 273 (291)
+.+.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 998874
No 216
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=95.88 E-value=0.05 Score=48.19 Aligned_cols=94 Identities=18% Similarity=0.219 Sum_probs=67.7
Q ss_pred hHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCce---Ee--CCCCCCchHH
Q 022819 183 GAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE---FL--NPNDNNEPVQ 253 (291)
Q Consensus 183 ~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~---~i--~~~~~~~~~~ 253 (291)
..+.+..++++|+++|=+|+| =|.+++-+|+..|. +|++++-+++..+.+++ .|... ++ |+.+ +
T Consensus 62 ~~~~~kl~L~~G~~lLDiGCG-WG~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd----~- 134 (283)
T COG2230 62 DLILEKLGLKPGMTLLDIGCG-WGGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD----F- 134 (283)
T ss_pred HHHHHhcCCCCCCEEEEeCCC-hhHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc----c-
Confidence 346788999999999999997 46677888888899 99999999999887765 45431 11 2221 1
Q ss_pred HHHHHHhcCCccEE-----EEccCC---hHHHHHHHHhhccCccc
Q 022819 254 QVIKRITDGGADYS-----FECIGD---TGMITTALQSCCDVRSI 290 (291)
Q Consensus 254 ~~~~~~~~g~~d~v-----ld~~g~---~~~~~~~~~~l~~~G~i 290 (291)
. +.||-| |+-+|. +..++.+.+.|+++|++
T Consensus 135 ------~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~ 172 (283)
T COG2230 135 ------E-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRM 172 (283)
T ss_pred ------c-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceE
Confidence 1 135543 344554 56789999999999985
No 217
>PRK07806 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.11 Score=44.76 Aligned_cols=79 Identities=20% Similarity=0.268 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHhc--
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD-- 261 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~-~~~~a----~~~g~~~-~--i~~~~~~~~~~~~~~~~~~-- 261 (291)
++++++|+|+ |.+|..++..+...|. +|+++.++.+ +.+.+ +..+... . .|..+ .++....+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 4578999987 9999999999888998 8888777543 33222 2223221 2 23332 2333333333322
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+.+|+++.+.|.
T Consensus 83 ~~~d~vi~~ag~ 94 (248)
T PRK07806 83 GGLDALVLNASG 94 (248)
T ss_pred CCCcEEEECCCC
Confidence 368998888764
No 218
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.062 Score=46.52 Aligned_cols=79 Identities=22% Similarity=0.251 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-H---cCCce-E--eCCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A---FGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~---~g~~~-~--i~~~~~~~~~~~~~~~~~--~g 262 (291)
+++++||.|+ +++|..++..+...|+ +|+.++++.++.+.+. + .+... . .|..+ ..+..+.+.+.. .+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4788999987 8999999999999999 8999988877665442 2 23221 2 23332 233333333322 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 219
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.86 E-value=0.031 Score=49.83 Aligned_cols=42 Identities=19% Similarity=0.342 Sum_probs=37.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a 234 (291)
++++++|+|+|+.+.+++..+..+|+++++.+.++.+|.+.+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~L 165 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRL 165 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 578899999999999999999999998899999988876654
No 220
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.86 E-value=0.088 Score=46.41 Aligned_cols=79 Identities=20% Similarity=0.354 Sum_probs=50.4
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCceEe--CCCCCCchHHHHHHHHhc--
Q 022819 193 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFL--NPNDNNEPVQQVIKRITD-- 261 (291)
Q Consensus 193 ~~~~vlV~G~g---~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~~i--~~~~~~~~~~~~~~~~~~-- 261 (291)
+++++||.|++ ++|.++++.+...|+ +|+.++++++..+.+ +++|....+ |..+ ..+..+.+.+...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED-IASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC-HHHHHHHHHHHHHHh
Confidence 46889999874 899999999999999 888887765322222 334533322 3332 1233333333322
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+.+|+++++.|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 479999999884
No 221
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=95.83 E-value=0.1 Score=45.25 Aligned_cols=97 Identities=16% Similarity=0.162 Sum_probs=67.5
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCc----e--EeCCCCCCchHHHHHHHH
Q 022819 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT----E--FLNPNDNNEPVQQVIKRI 259 (291)
Q Consensus 186 ~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~----~--~i~~~~~~~~~~~~~~~~ 259 (291)
.......+|++||-+++| .|..++.+++..|-.+|+++|-+++-++.+++--.+ . .+.-+. +.+- +
T Consensus 44 i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dA------e~LP-f 115 (238)
T COG2226 44 ISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDA------ENLP-F 115 (238)
T ss_pred HHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEech------hhCC-C
Confidence 344456689999999776 788999999998766999999999999988763221 1 111110 1111 2
Q ss_pred hcCCccEEEEccCC------hHHHHHHHHhhccCccc
Q 022819 260 TDGGADYSFECIGD------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 260 ~~g~~d~vld~~g~------~~~~~~~~~~l~~~G~i 290 (291)
.+..||+|.-+.|- +..+++..+.|+|||++
T Consensus 116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~ 152 (238)
T COG2226 116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRL 152 (238)
T ss_pred CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEE
Confidence 33378887765553 56789999999999975
No 222
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.82 E-value=0.032 Score=46.62 Aligned_cols=93 Identities=15% Similarity=0.133 Sum_probs=58.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCceEeCCCCCCchHHHHHHHHhcCCccE
Q 022819 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDGGADY 266 (291)
Q Consensus 191 ~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~ 266 (291)
+.++.+||-+|+| .|..++.+++.....+|++++.+++..+.+++ .+.+.+ .... .+..+ +.. .+.+|+
T Consensus 43 l~~g~~VLDiGcG-tG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~--~d~~~-~~~--~~~fDl 115 (187)
T PRK00107 43 LPGGERVLDVGSG-AGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVH--GRAEE-FGQ--EEKFDV 115 (187)
T ss_pred cCCCCeEEEEcCC-CCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe--ccHhh-CCC--CCCccE
Confidence 4458899999875 35555566654433399999999988777754 344321 1110 11111 111 237998
Q ss_pred EEEccCC--hHHHHHHHHhhccCccc
Q 022819 267 SFECIGD--TGMITTALQSCCDVRSI 290 (291)
Q Consensus 267 vld~~g~--~~~~~~~~~~l~~~G~i 290 (291)
|+-.... +..++.+.+.|+++|++
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpGG~l 141 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPGGRF 141 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCCeEE
Confidence 8864322 46788899999999986
No 223
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.82 E-value=0.054 Score=45.86 Aligned_cols=80 Identities=23% Similarity=0.345 Sum_probs=58.8
Q ss_pred CCCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCce-EeCCCCCCch---HHHHHHHHhcCCc
Q 022819 192 SKGSTVVIFGL--GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-FLNPNDNNEP---VQQVIKRITDGGA 264 (291)
Q Consensus 192 ~~~~~vlV~G~--g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~~g~~~-~i~~~~~~~~---~~~~~~~~~~g~~ 264 (291)
+..+.|||.|+ |++|.+...=....|+ .|+++.++-+..+.+. ++|... -+|..+ +++ +...++..++|..
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~-~~~V~~v~~evr~~~~Gkl 82 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSK-PEEVVTVSGEVRANPDGKL 82 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCC-hHHHHHHHHHHhhCCCCce
Confidence 45678999975 8999999988889999 9999999988877665 666432 344433 122 3445556677789
Q ss_pred cEEEEccCC
Q 022819 265 DYSFECIGD 273 (291)
Q Consensus 265 d~vld~~g~ 273 (291)
|+.++..|.
T Consensus 83 d~L~NNAG~ 91 (289)
T KOG1209|consen 83 DLLYNNAGQ 91 (289)
T ss_pred EEEEcCCCC
Confidence 999998775
No 224
>PRK06196 oxidoreductase; Provisional
Probab=95.81 E-value=0.084 Score=47.54 Aligned_cols=79 Identities=24% Similarity=0.337 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCceE--eCCCCCCchHHHHHHHHhc--CCccE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRITD--GGADY 266 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~~~~--i~~~~~~~~~~~~~~~~~~--g~~d~ 266 (291)
.+++++|+|+ |++|..++..+...|+ +|+.++++.++.+.+ +++..... .|..+ ..+..+.+.+... +++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD-LESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC-HHHHHHHHHHHHhcCCCCCE
Confidence 4678999987 8999999998888999 899998888766543 22221122 23332 1333333443322 47999
Q ss_pred EEEccCC
Q 022819 267 SFECIGD 273 (291)
Q Consensus 267 vld~~g~ 273 (291)
++.+.|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9998874
No 225
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.80 E-value=0.084 Score=45.41 Aligned_cols=79 Identities=22% Similarity=0.363 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHHcCCce-Ee--CCCCCCchHHHHHHHHhc--CCc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTE-FL--NPNDNNEPVQQVIKRITD--GGA 264 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~--~~~~a~~~g~~~-~i--~~~~~~~~~~~~~~~~~~--g~~ 264 (291)
+++++||.|+ |++|..++..+...|+ +|+.+++++. ..+.+++++... .+ |..+ ..++...+.+... +++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4788999987 8999999999999999 8998887652 223334444322 22 3322 2333333333322 378
Q ss_pred cEEEEccCC
Q 022819 265 DYSFECIGD 273 (291)
Q Consensus 265 d~vld~~g~ 273 (291)
|+++.+.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998875
No 226
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.80 E-value=0.11 Score=49.27 Aligned_cols=79 Identities=20% Similarity=0.332 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhH-HHHHHcCCce-EeCCCCCCchHHHHHHHHh--cCCcc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKC-EKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~--~~~-~~a~~~g~~~-~i~~~~~~~~~~~~~~~~~--~g~~d 265 (291)
+++++||+|+ |++|..+++.+...|+ +|+.+++++ +++ +..++++... ..|..+ .......+.... .+++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhCCCCC
Confidence 5789999987 9999999999999999 888887643 222 2334455433 234433 122222222222 23789
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
++|.+.|.
T Consensus 287 ~vi~~AG~ 294 (450)
T PRK08261 287 IVVHNAGI 294 (450)
T ss_pred EEEECCCc
Confidence 99999884
No 227
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.79 E-value=0.027 Score=47.33 Aligned_cols=94 Identities=17% Similarity=0.209 Sum_probs=59.5
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCceEeCCCCCCchHHHHHHHHh-c
Q 022819 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRIT-D 261 (291)
Q Consensus 187 ~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~----g~~~~i~~~~~~~~~~~~~~~~~-~ 261 (291)
+.....++.+||-+|+| .|..++.+++. |. +|+++|.+++-++.+++. +... +.... .++ .++. .
T Consensus 24 ~~l~~~~~~~vLDiGcG-~G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~--~d~----~~~~~~ 93 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCG-NGRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDN-LHTAV--VDL----NNLTFD 93 (197)
T ss_pred HhcccCCCCcEEEECCC-CCHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEe--cCh----hhCCcC
Confidence 33445567899999987 37777777774 77 999999999877766543 2221 11100 111 1111 2
Q ss_pred CCccEEEEccCC--------hHHHHHHHHhhccCccc
Q 022819 262 GGADYSFECIGD--------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 262 g~~d~vld~~g~--------~~~~~~~~~~l~~~G~i 290 (291)
+.+|+|+.+..- ...+....+.|++||.+
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~ 130 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYN 130 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEE
Confidence 369999875331 35677888899999973
No 228
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.75 E-value=0.11 Score=43.75 Aligned_cols=46 Identities=39% Similarity=0.636 Sum_probs=39.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGV 239 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~g~ 239 (291)
++.+++|+|.|.+|..+++.+...|+ +|++++.++++.+.+++ +++
T Consensus 27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~ 73 (200)
T cd01075 27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGA 73 (200)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCC
Confidence 67899999999999999999999999 89999998887766543 454
No 229
>PRK12939 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.11 Score=44.49 Aligned_cols=79 Identities=20% Similarity=0.225 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCce-Ee--CCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~----~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g 262 (291)
++++++|+|+ |++|..++..+...|+ +++++++++++.+.+. +.+... ++ |..+ ..+..+.+.+.. .+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4688999987 9999999999999999 8888888877655332 223222 22 3332 122222222221 14
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
++|+++.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999885
No 230
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.088 Score=45.21 Aligned_cols=79 Identities=25% Similarity=0.342 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCce-E--eCCCCCCchHHHHHHHHh--cCCcc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g~~d 265 (291)
++++++|.|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++... . .|..+ ..+....+.+.. .+.+|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4678999987 9999999999999999 899998887765544 3455432 2 23222 122222222221 24789
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998874
No 231
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.094 Score=45.68 Aligned_cols=79 Identities=22% Similarity=0.254 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCC-ce-E--eCCCCCCchHHHHHHHHh--
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGV-TE-F--LNPNDNNEPVQQVIKRIT-- 260 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-----~g~-~~-~--i~~~~~~~~~~~~~~~~~-- 260 (291)
++++++|.|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ .+. .. . .|..+ .++..+.+.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4688999987 8999999999999999 89999998876654321 111 11 1 23332 123333333322
Q ss_pred cCCccEEEEccCC
Q 022819 261 DGGADYSFECIGD 273 (291)
Q Consensus 261 ~g~~d~vld~~g~ 273 (291)
.+.+|+++.+.|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 2479999999884
No 232
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.092 Score=45.63 Aligned_cols=78 Identities=17% Similarity=0.167 Sum_probs=51.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCC--c-eE--eCCCCCCchHHHHHHHHhc--CCc
Q 022819 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGV--T-EF--LNPNDNNEPVQQVIKRITD--GGA 264 (291)
Q Consensus 194 ~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~g~--~-~~--i~~~~~~~~~~~~~~~~~~--g~~ 264 (291)
+.++||+|+ |++|...+..+...|+ +|+.+++++++.+.+.+ +.. . .. .|..+ .+++.+.+.+... +.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCC
Confidence 468999986 9999999999888999 89999998887665433 221 1 12 23322 2333333333322 368
Q ss_pred cEEEEccCC
Q 022819 265 DYSFECIGD 273 (291)
Q Consensus 265 d~vld~~g~ 273 (291)
|+++.+.|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998874
No 233
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.71 E-value=0.073 Score=46.12 Aligned_cols=79 Identities=25% Similarity=0.390 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-Ee--CCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g 262 (291)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +..|... .+ |..+ .+++.+.+.+.. .+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5789999987 9999999999888999 899998887765433 2223222 22 3332 233333333322 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 78999999875
No 234
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.099 Score=45.53 Aligned_cols=79 Identities=27% Similarity=0.384 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c--CCc-eEe--CCCCCCchHHHHHHHHh-cCCc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F--GVT-EFL--NPNDNNEPVQQVIKRIT-DGGA 264 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~--g~~-~~i--~~~~~~~~~~~~~~~~~-~g~~ 264 (291)
++.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+ + +.. ..+ |..+ .....+.+.... .+.+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS-EAGREAVLARAREMGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence 4678999986 9999999999989998 89999998877665532 2 211 122 3322 122222222211 2578
Q ss_pred cEEEEccCC
Q 022819 265 DYSFECIGD 273 (291)
Q Consensus 265 d~vld~~g~ 273 (291)
|+++.+.|.
T Consensus 82 d~lv~~ag~ 90 (263)
T PRK09072 82 NVLINNAGV 90 (263)
T ss_pred CEEEECCCC
Confidence 999999875
No 235
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.11 Score=45.09 Aligned_cols=77 Identities=22% Similarity=0.230 Sum_probs=52.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cC-Cc-e--EeCCCCCCchHHHHHHHHh---cCCcc
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG-VT-E--FLNPNDNNEPVQQVIKRIT---DGGAD 265 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~g-~~-~--~i~~~~~~~~~~~~~~~~~---~g~~d 265 (291)
+++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.+ ++ .. . ..|..+ ..++.+.+.+.. .+.+|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence 57899987 9999999998888998 89999988887665543 32 11 1 234432 233333333321 34789
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999885
No 236
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.088 Score=45.56 Aligned_cols=78 Identities=24% Similarity=0.293 Sum_probs=51.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCce-Ee--CCCCCCchHHHHHHHHh--cCC
Q 022819 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FL--NPNDNNEPVQQVIKRIT--DGG 263 (291)
Q Consensus 194 ~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~-~i--~~~~~~~~~~~~~~~~~--~g~ 263 (291)
++++||.|+ |++|...++.+...|+ +|+++++++++.+.+.+ .+... .+ |..+ +.+..+.+.+.. .+.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN-PEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence 468999987 8999999999999999 99999888776554432 22222 23 3322 233333333332 247
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++.+.|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 8999998874
No 237
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.70 E-value=0.11 Score=45.29 Aligned_cols=79 Identities=22% Similarity=0.324 Sum_probs=49.3
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhH---H-HHHHcCCceEe--CCCCCCchHHHHHHHHh--c
Q 022819 193 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKC---E-KAKAFGVTEFL--NPNDNNEPVQQVIKRIT--D 261 (291)
Q Consensus 193 ~~~~vlV~G~g---~~G~~~i~~a~~~g~~~vi~~~~~~~~~---~-~a~~~g~~~~i--~~~~~~~~~~~~~~~~~--~ 261 (291)
+++++||.|++ ++|.++++.+...|+ +|+.++++++.. + ..++++....+ |..+ ..+..+.+.+.. .
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE-PGQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC-HHHHHHHHHHHHHHc
Confidence 46889999863 899999999888999 888887775432 2 22334432333 3322 233333333322 2
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+.+|+++.+.|.
T Consensus 87 g~ld~lv~nAg~ 98 (258)
T PRK07533 87 GRLDFLLHSIAF 98 (258)
T ss_pred CCCCEEEEcCcc
Confidence 479999998874
No 238
>PRK08317 hypothetical protein; Provisional
Probab=95.69 E-value=0.029 Score=47.93 Aligned_cols=98 Identities=17% Similarity=0.268 Sum_probs=65.1
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHHc----CCce-EeCCCCCCchHHHHHHH
Q 022819 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF----GVTE-FLNPNDNNEPVQQVIKR 258 (291)
Q Consensus 185 l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g-~~~vi~~~~~~~~~~~a~~~----g~~~-~i~~~~~~~~~~~~~~~ 258 (291)
+.+..++.++++||.+|+|. |..+..+++..+ ..++++++.+++.++.+++. +... ++..+. .+. .
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~--~~~-----~ 82 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA--DGL-----P 82 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc--ccC-----C
Confidence 34567788999999999975 888888888763 23899999999988888764 1111 111111 110 1
Q ss_pred HhcCCccEEEEc-----cC-ChHHHHHHHHhhccCccc
Q 022819 259 ITDGGADYSFEC-----IG-DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 259 ~~~g~~d~vld~-----~g-~~~~~~~~~~~l~~~G~i 290 (291)
+..+.+|.|+-. .. ....+..+.++|+++|.+
T Consensus 83 ~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l 120 (241)
T PRK08317 83 FPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRV 120 (241)
T ss_pred CCCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEE
Confidence 222478877753 22 245788999999999975
No 239
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.092 Score=45.17 Aligned_cols=79 Identities=23% Similarity=0.339 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HH---cCCc-e--EeCCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA---FGVT-E--FLNPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~---~g~~-~--~i~~~~~~~~~~~~~~~~~--~g 262 (291)
++++++|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++ .+.. . ..|..+ .......+.+.. .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAFG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4678999987 9999999998888998 899998887654333 22 2221 1 223322 122222222221 13
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 68999999884
No 240
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.12 Score=44.33 Aligned_cols=80 Identities=26% Similarity=0.321 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCce----EeCCCCC-Cch---HHHHHHHH
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE----FLNPNDN-NEP---VQQVIKRI 259 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~----~~g~~~----~i~~~~~-~~~---~~~~~~~~ 259 (291)
++++++|+|+ |++|...++.+...|+ +|+.+++++++.+.+. +.+... ..|..+. ..+ +.+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4578999987 9999999999988999 8999999887655432 222111 1232211 122 23333333
Q ss_pred hcCCccEEEEccCC
Q 022819 260 TDGGADYSFECIGD 273 (291)
Q Consensus 260 ~~g~~d~vld~~g~ 273 (291)
..+.+|+++.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 32578999999884
No 241
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.67 E-value=0.12 Score=48.42 Aligned_cols=73 Identities=23% Similarity=0.336 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEc
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~-~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~ 270 (291)
-.+.++||+|+|-+|..++..+...|...|+..-++.+|.. +++++|+. ++.. ++....+. .+|+||-+
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l----~el~~~l~-----~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVAL----EELLEALA-----EADVVISS 245 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecH----HHHHHhhh-----hCCEEEEe
Confidence 36788999999999999999999999878888888877744 67888843 3322 22333333 48999999
Q ss_pred cCCh
Q 022819 271 IGDT 274 (291)
Q Consensus 271 ~g~~ 274 (291)
++.+
T Consensus 246 Tsa~ 249 (414)
T COG0373 246 TSAP 249 (414)
T ss_pred cCCC
Confidence 9874
No 242
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.66 E-value=0.067 Score=46.41 Aligned_cols=99 Identities=18% Similarity=0.167 Sum_probs=69.2
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCceEeCCCCCCchHHHHHHHH
Q 022819 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI 259 (291)
Q Consensus 185 l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~----~g~~~~i~~~~~~~~~~~~~~~~ 259 (291)
+....++.++++|+=.|.| .|.++.-+|++.|. .+|+..+..++..+.|++ +|....+.... .|. .+.
T Consensus 86 I~~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~--~Dv----~~~ 158 (256)
T COG2519 86 IVARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL--GDV----REG 158 (256)
T ss_pred HHHHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe--ccc----ccc
Confidence 3456788999999888775 57788888887765 599999999998887754 44433221111 222 221
Q ss_pred hcC-Ccc-EEEEccCChHHHHHHHHhhccCccc
Q 022819 260 TDG-GAD-YSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 260 ~~g-~~d-~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
... .+| +++|--.....++.+.+.|++||++
T Consensus 159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~ 191 (256)
T COG2519 159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPGGVV 191 (256)
T ss_pred ccccccCEEEEcCCChHHHHHHHHHHhCCCcEE
Confidence 122 687 5677777778999999999999875
No 243
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.095 Score=45.71 Aligned_cols=79 Identities=20% Similarity=0.344 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCce-E--eCCCCCCchHHHHHHHHh--cCCcc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g~~d 265 (291)
++++++|.|+ |++|..++..+...|+ +|+.++++.++.+.+ ++++... . .|..+ +.++.+.+.+.. .+.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4678999987 8999999999999999 999999887765544 4444322 2 23332 233333333322 24789
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998874
No 244
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.13 Score=44.08 Aligned_cols=80 Identities=18% Similarity=0.173 Sum_probs=52.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCce-Ee--CCCCCCchHHHHHHHHh--c
Q 022819 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (291)
Q Consensus 192 ~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~----~~g~~~-~i--~~~~~~~~~~~~~~~~~--~ 261 (291)
.+.++++|.|+ |.+|..++..+...|. +|+++++++++.+.+. +.+... ++ |..+ .+++...+.+.. .
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQF 81 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 35678999987 9999999999999999 8999999877654432 222222 22 3322 133333333322 1
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+.+|+++.+.|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 368999999884
No 245
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.63 E-value=0.06 Score=53.77 Aligned_cols=76 Identities=25% Similarity=0.324 Sum_probs=52.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHHcCCceEeCCCCCC-
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE---------------------KCEKAKAFGVTEFLNPNDNN- 249 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~---------------------~~~~a~~~g~~~~i~~~~~~- 249 (291)
..+++|+|+|+|+.|++++..+..+|. .|++++..+. +.+.++++|+....+..-..
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 357899999999999999999999999 7888876532 34566777875544432111
Q ss_pred chHHHHHHHHhcCCccEEEEccCC
Q 022819 250 EPVQQVIKRITDGGADYSFECIGD 273 (291)
Q Consensus 250 ~~~~~~~~~~~~g~~d~vld~~g~ 273 (291)
... +.+. ..+|.||.++|.
T Consensus 404 i~~-~~~~----~~~DavilAtGa 422 (654)
T PRK12769 404 ISL-ESLL----EDYDAVFVGVGT 422 (654)
T ss_pred CCH-HHHH----hcCCEEEEeCCC
Confidence 111 1111 268999998886
No 246
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.63 E-value=0.1 Score=45.23 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHHHcCCce-EeCCCCCCchHHHHHHHHh--cCCccEE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYS 267 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~-~~~~~~~a~~~g~~~-~i~~~~~~~~~~~~~~~~~--~g~~d~v 267 (291)
.+++++|.|+ |++|..+++.+...|+ +|+.+.+ +++..+.++..+... ..|..+ ..+..+.+.+.. .+++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4688999987 9999999999999999 7776644 344444444433322 223332 233333343332 2478999
Q ss_pred EEccCC
Q 022819 268 FECIGD 273 (291)
Q Consensus 268 ld~~g~ 273 (291)
+.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998875
No 247
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.62 E-value=0.087 Score=45.68 Aligned_cols=79 Identities=16% Similarity=0.215 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH---cCCce-E--eCCCCCCchHHHHHHHHh--cCC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~---~g~~~-~--i~~~~~~~~~~~~~~~~~--~g~ 263 (291)
+++++||+|+ |++|..+++.+...|+ +++.+++++++.+..++ .+... . .|..+ .......+.+.. .++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcCC
Confidence 4678999987 8999999999888999 78888887776544433 23222 2 23322 122333333322 247
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++.+.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 8999999884
No 248
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.099 Score=45.25 Aligned_cols=79 Identities=20% Similarity=0.290 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCce-Ee--CCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~----~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g 262 (291)
++++++|.|+ |++|..++..+...|+ +|+.+++++++.+.+. +.+... .+ |..+ .++....+.+.. .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4678999987 8999999999888999 8999988887765442 233322 22 3322 122333333322 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 249
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=95.59 E-value=0.025 Score=47.95 Aligned_cols=98 Identities=19% Similarity=0.270 Sum_probs=64.9
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHH----cCCceEeCCCCCCchHHHHHHHHhc-
Q 022819 189 ADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD- 261 (291)
Q Consensus 189 ~~~~~~~~vlV~G~g~~G~~~i~~a~~~--g~~~vi~~~~~~~~~~~a~~----~g~~~~i~~~~~~~~~~~~~~~~~~- 261 (291)
.+....++||-+|.+ .|+.++.+|+.+ +. +|+.++.++++.+.+++ .|...-+.... .+..+.+.++..
T Consensus 41 ~~~~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~ 116 (205)
T PF01596_consen 41 VRLTRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELAND 116 (205)
T ss_dssp HHHHT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHT
T ss_pred HHhcCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhc
Confidence 334566899999875 688999999987 45 99999999999888855 45433222211 334444554432
Q ss_pred ---CCccEEE-EccCC--hHHHHHHHHhhccCccc
Q 022819 262 ---GGADYSF-ECIGD--TGMITTALQSCCDVRSI 290 (291)
Q Consensus 262 ---g~~d~vl-d~~g~--~~~~~~~~~~l~~~G~i 290 (291)
+.||.|| |+--. ...++.++++|++||.|
T Consensus 117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvi 151 (205)
T PF01596_consen 117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVI 151 (205)
T ss_dssp TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEE
T ss_pred cCCCceeEEEEcccccchhhHHHHHhhhccCCeEE
Confidence 3699665 44332 45688899999999865
No 250
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.58 E-value=0.13 Score=43.92 Aligned_cols=79 Identities=25% Similarity=0.396 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHhc--C
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~--i~~~~~~~~~~~~~~~~~~--g 262 (291)
+++++||+|+ |.+|...+..+...|. +|+.+.+++++.+.+ +..+... . .|..+ ...+...+.+... +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 3568999987 9999999999888999 799999887765433 2334322 2 23332 2333333433321 3
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|.++.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999998865
No 251
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.1 Score=45.06 Aligned_cols=80 Identities=20% Similarity=0.266 Sum_probs=52.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c---CCce---EeCCCCCCchHHHHHHHHhc--
Q 022819 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F---GVTE---FLNPNDNNEPVQQVIKRITD-- 261 (291)
Q Consensus 192 ~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~---g~~~---~i~~~~~~~~~~~~~~~~~~-- 261 (291)
-++++++|.|+ |++|..++..+...|+ +|+.+++++++.+.+.+ + +... ..|..+ ..++...+.+...
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD-EDQCANLVALALERF 80 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC-HHHHHHHHHHHHHHc
Confidence 35688999987 8999999999999999 89999888876554422 2 3221 223322 2333333333221
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+.+|+++.+.|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 478999998874
No 252
>PRK07109 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.16 Score=46.36 Aligned_cols=79 Identities=27% Similarity=0.238 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g 262 (291)
++++++|+|+ |++|..+++.+...|+ +|+.+++++++++.+ ++.|... . .|..+ ..+..+.+.+.. .+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence 4678999987 9999999999999999 899998988776543 2345433 2 24332 123333333222 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
++|+++++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 253
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.55 E-value=0.11 Score=41.43 Aligned_cols=48 Identities=35% Similarity=0.502 Sum_probs=37.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHHcCC
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK-AKAFGV 239 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~-a~~~g~ 239 (291)
.++.+++|+|+|.+|...++.+...|...+++++++.++.+. +++++.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~ 65 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGE 65 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence 456889999999999999998888874489999988877654 445543
No 254
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.54 E-value=0.14 Score=43.84 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=50.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHHcCCce-EeCCCCCCchHHHHHHHHhc--CCccEEE
Q 022819 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAKAFGVTE-FLNPNDNNEPVQQVIKRITD--GGADYSF 268 (291)
Q Consensus 194 ~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~-~~~a~~~g~~~-~i~~~~~~~~~~~~~~~~~~--g~~d~vl 268 (291)
++++||.|+ +++|..+++.+...|+ +|+.+++++++ .+.++..++.. ..|..+ ..+....+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEEE
Confidence 468999987 8999999999888999 88888876643 33344455322 223322 2333333333322 3689999
Q ss_pred EccCC
Q 022819 269 ECIGD 273 (291)
Q Consensus 269 d~~g~ 273 (291)
.+.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98874
No 255
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.19 Score=43.10 Aligned_cols=78 Identities=15% Similarity=0.173 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-Ee--CCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g 262 (291)
++++++|.|+ +++|++++..+...|+ +|+.+++++++++.+ ++.+... .+ |..+ .++..+.+.+.. -+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4678999987 7999999999989999 899999888876543 2334332 22 3222 233333333322 14
Q ss_pred -CccEEEEccC
Q 022819 263 -GADYSFECIG 272 (291)
Q Consensus 263 -~~d~vld~~g 272 (291)
.+|+++.+.|
T Consensus 82 ~~iD~li~nag 92 (227)
T PRK08862 82 RAPDVLVNNWT 92 (227)
T ss_pred CCCCEEEECCc
Confidence 7999999986
No 256
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.53 E-value=0.16 Score=45.31 Aligned_cols=42 Identities=26% Similarity=0.352 Sum_probs=36.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a 234 (291)
++++++|+|+|+.+++++..+..+|+.+++.+.++.+|.+.+
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L 167 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL 167 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence 468899999999999999988889998899999988876654
No 257
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.14 Score=44.54 Aligned_cols=81 Identities=20% Similarity=0.347 Sum_probs=50.7
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhh-HHH----HHHcCC-c-eEe--CCCCCCchHHHHHHHH
Q 022819 191 ISKGSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEK-CEK----AKAFGV-T-EFL--NPNDNNEPVQQVIKRI 259 (291)
Q Consensus 191 ~~~~~~vlV~G~-g~~G~~~i~~a~~~g-~~~vi~~~~~~~~-~~~----a~~~g~-~-~~i--~~~~~~~~~~~~~~~~ 259 (291)
+..++++||.|+ |++|..+++-+...| + +|+.+++++++ ++. +++.+. . .++ |..+ ..+..+.+.+.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHHH
Confidence 456789999987 899999998777775 7 89998887764 332 233332 1 222 3322 23333333333
Q ss_pred hc-CCccEEEEccCC
Q 022819 260 TD-GGADYSFECIGD 273 (291)
Q Consensus 260 ~~-g~~d~vld~~g~ 273 (291)
.. +.+|+++.+.|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 22 479999887765
No 258
>PRK06194 hypothetical protein; Provisional
Probab=95.52 E-value=0.099 Score=46.12 Aligned_cols=79 Identities=22% Similarity=0.314 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHc---CCce-Ee--CCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF---GVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~---g~~~-~i--~~~~~~~~~~~~~~~~~--~g 262 (291)
+++++||+|+ |++|..++..+...|+ +|+.++++.++++.+ +++ +... ++ |..+ ..++.+.+.+.. .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 3578999987 9999999999988999 899998877654433 222 3322 22 3322 123333333221 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 78999999885
No 259
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.51 E-value=0.13 Score=44.96 Aligned_cols=95 Identities=18% Similarity=0.214 Sum_probs=62.7
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCc-eEeCCCCCCchHHHHHHHHh-cCC
Q 022819 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRIT-DGG 263 (291)
Q Consensus 186 ~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~-~~i~~~~~~~~~~~~~~~~~-~g~ 263 (291)
.....+.++++||-+|+| .|..+..+++.....+|++++.+++.++.+++.-.. .++..+ . ..+. ...
T Consensus 24 l~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d-----~----~~~~~~~~ 93 (258)
T PRK01683 24 LARVPLENPRYVVDLGCG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD-----I----ASWQPPQA 93 (258)
T ss_pred HhhCCCcCCCEEEEEccc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc-----h----hccCCCCC
Confidence 344566788999999886 466677777776434999999999988888764221 122211 1 1111 237
Q ss_pred ccEEEEccC-----C-hHHHHHHHHhhccCccc
Q 022819 264 ADYSFECIG-----D-TGMITTALQSCCDVRSI 290 (291)
Q Consensus 264 ~d~vld~~g-----~-~~~~~~~~~~l~~~G~i 290 (291)
+|+|+-... . ...+..+.+.|++||++
T Consensus 94 fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~ 126 (258)
T PRK01683 94 LDLIFANASLQWLPDHLELFPRLVSLLAPGGVL 126 (258)
T ss_pred ccEEEEccChhhCCCHHHHHHHHHHhcCCCcEE
Confidence 888875433 1 35688888999999975
No 260
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.50 E-value=0.11 Score=44.96 Aligned_cols=79 Identities=27% Similarity=0.278 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH---cCCce---EeCCCCCCchHHHHHHHHh--cCC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE---FLNPNDNNEPVQQVIKRIT--DGG 263 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~---~g~~~---~i~~~~~~~~~~~~~~~~~--~g~ 263 (291)
+++++||.|+ |++|.++++.+...|+ +|+.+++++...+..++ .+... ..|..+ ..+....+.+.. .+.
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence 4678999987 8999999999999999 89999887543333333 23322 223332 123333333332 247
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++.+.|.
T Consensus 85 id~lv~nAg~ 94 (260)
T PRK12823 85 IDVLINNVGG 94 (260)
T ss_pred CeEEEECCcc
Confidence 9999998873
No 261
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=95.49 E-value=0.12 Score=45.20 Aligned_cols=100 Identities=18% Similarity=0.226 Sum_probs=66.3
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCceEeCCCCCCchHHHHHHHHh--
Q 022819 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT-- 260 (291)
Q Consensus 188 ~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~----~g~~~~i~~~~~~~~~~~~~~~~~-- 260 (291)
..+....++||-+|.+ +|+.++.+|+.++. .+++.++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 74 l~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~--G~a~e~L~~l~~~ 150 (247)
T PLN02589 74 LLKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE--GPALPVLDQMIED 150 (247)
T ss_pred HHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--ccHHHHHHHHHhc
Confidence 3445566789999874 78888889987732 289999999988877754 45433222222 33445555543
Q ss_pred ---cCCccEEEEccCC---hHHHHHHHHhhccCccc
Q 022819 261 ---DGGADYSFECIGD---TGMITTALQSCCDVRSI 290 (291)
Q Consensus 261 ---~g~~d~vld~~g~---~~~~~~~~~~l~~~G~i 290 (291)
.+.||.||-=... ...++.++++|++||.|
T Consensus 151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGvi 186 (247)
T PLN02589 151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVI 186 (247)
T ss_pred cccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEE
Confidence 1479976643222 45688889999999875
No 262
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.49 E-value=0.12 Score=41.46 Aligned_cols=79 Identities=25% Similarity=0.347 Sum_probs=50.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC--hhhHHHH----HHcCCce-EeCCCC-CCchHHHHHHHHh--cCC
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN--PEKCEKA----KAFGVTE-FLNPND-NNEPVQQVIKRIT--DGG 263 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~--~~~~~~a----~~~g~~~-~i~~~~-~~~~~~~~~~~~~--~g~ 263 (291)
+++||+|+ +++|+..++.+...|..+|+.+.++ .++.+.+ +..+... ++..+- +.++....+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 47899987 8999999988888877688888888 4443322 3344322 222221 1234444444443 248
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999886
No 263
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.14 Score=43.65 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=49.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCceE-eCCCCCCchHHHHHHHHhcCCccEEEEccC
Q 022819 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (291)
Q Consensus 196 ~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~~~~-i~~~~~~~~~~~~~~~~~~g~~d~vld~~g 272 (291)
+++|.|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+ ..++.+.+++.. +.+|+++.+.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD-PASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC-HHHHHHHHHHHh-hcCcEEEECCC
Confidence 4788887 8999999999988999 899998988876654 34443322 33332 123333333332 26899998865
No 264
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.48 E-value=0.096 Score=44.67 Aligned_cols=96 Identities=19% Similarity=0.130 Sum_probs=59.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCceEeC-------CCCCCch-HHHHHHHHh--
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLN-------PNDNNEP-VQQVIKRIT-- 260 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~~~~i~-------~~~~~~~-~~~~~~~~~-- 260 (291)
.++.+||+.|+| .|.-++-+|. .|. .|+++|.++.-++.+ ++.+...... +.....+ ....+.++.
T Consensus 33 ~~~~rvLd~GCG-~G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLCG-KSLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCCC-chhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 567899999987 6777777775 699 999999999988875 3333221100 0000000 000000111
Q ss_pred -cCCccEEEEccCC--------hHHHHHHHHhhccCccc
Q 022819 261 -DGGADYSFECIGD--------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 261 -~g~~d~vld~~g~--------~~~~~~~~~~l~~~G~i 290 (291)
.+.+|.|+|+..- +..++...++|++||++
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ 148 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQ 148 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeE
Confidence 1368999996531 34688999999999974
No 265
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.056 Score=47.28 Aligned_cols=77 Identities=22% Similarity=0.375 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCce-EeCCCCCCchHHHHHHHHh--cCCccEEE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~-~i~~~~~~~~~~~~~~~~~--~g~~d~vl 268 (291)
.+++++|.|+ |.+|..+++.+...|+ +|++++++.++.+... +... ..|..+ .+++.+.+.+.. .+.+|+++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d-~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD-DASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC-HHHHHHHHHHHHHhCCCCCEEE
Confidence 3568999987 9999999999888999 8999988776543321 2222 223332 233444444332 24789999
Q ss_pred EccCC
Q 022819 269 ECIGD 273 (291)
Q Consensus 269 d~~g~ 273 (291)
.+.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99885
No 266
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.47 E-value=0.23 Score=41.40 Aligned_cols=75 Identities=31% Similarity=0.408 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c----CCce-EeCCCCCCchHHHHHHHHhcCCcc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVTE-FLNPNDNNEPVQQVIKRITDGGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~----g~~~-~i~~~~~~~~~~~~~~~~~~g~~d 265 (291)
++.+++|+|+ |.+|..++..+...|. +|+.+.++.++.+.+.+ + +... ..+..+ ..+..+.+ .++|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~-----~~~d 99 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-DAARAAAI-----KGAD 99 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-HHHHHHHH-----hcCC
Confidence 5678999986 9999999888888887 89888888877655432 2 2221 112211 12222222 2579
Q ss_pred EEEEccCCh
Q 022819 266 YSFECIGDT 274 (291)
Q Consensus 266 ~vld~~g~~ 274 (291)
+||.+++..
T Consensus 100 iVi~at~~g 108 (194)
T cd01078 100 VVFAAGAAG 108 (194)
T ss_pred EEEECCCCC
Confidence 999887753
No 267
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.46 E-value=0.16 Score=44.45 Aligned_cols=94 Identities=19% Similarity=0.200 Sum_probs=64.6
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHh-cC
Q 022819 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT-DG 262 (291)
Q Consensus 185 l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~-g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~-~g 262 (291)
+.......++++||-+|+|. |..+..+++.. +. +|+++|.+++-++.+++.+... +.. +. .++. .+
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~-~~~-----d~----~~~~~~~ 88 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDA-RTG-----DV----RDWKPKP 88 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcE-EEc-----Ch----hhCCCCC
Confidence 34555667889999998863 66677777765 55 8999999999998888765432 221 11 1111 23
Q ss_pred CccEEEEccC-----C-hHHHHHHHHhhccCccc
Q 022819 263 GADYSFECIG-----D-TGMITTALQSCCDVRSI 290 (291)
Q Consensus 263 ~~d~vld~~g-----~-~~~~~~~~~~l~~~G~i 290 (291)
.||+|+-... . ...+..+.+.|++||++
T Consensus 89 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l 122 (255)
T PRK14103 89 DTDVVVSNAALQWVPEHADLLVRWVDELAPGSWI 122 (255)
T ss_pred CceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEE
Confidence 7998887432 2 45678888999999986
No 268
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.12 Score=44.71 Aligned_cols=79 Identities=20% Similarity=0.387 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-Ee--CCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g 262 (291)
++++++|.|+ |++|..++..+...|+ +|+.+++++++.+.+ ++.+... .+ |..+ ..+....+.+.. .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAYG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4689999987 8999999998888898 899999887765433 2334322 22 3322 122323332221 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 269
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.45 E-value=0.05 Score=45.67 Aligned_cols=94 Identities=11% Similarity=0.091 Sum_probs=57.4
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCceEeCCCCCCchHHHHHHHHhcC
Q 022819 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITDG 262 (291)
Q Consensus 187 ~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~----g~~~~i~~~~~~~~~~~~~~~~~~g 262 (291)
+.....++.+||-+|+| .|..++.+++ .|. +|+++|.+++-++.+++. +....... .+... . .+ .+
T Consensus 24 ~~~~~~~~~~vLDiGcG-~G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~----~d~~~-~-~~-~~ 93 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGCG-QGRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPLRTDA----YDINA-A-AL-NE 93 (195)
T ss_pred HHhccCCCCcEEEeCCC-CCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCceeEe----ccchh-c-cc-cC
Confidence 34444556789999886 5666666666 477 999999999877766542 32211100 11100 0 11 23
Q ss_pred CccEEEEccC-----C---hHHHHHHHHhhccCccc
Q 022819 263 GADYSFECIG-----D---TGMITTALQSCCDVRSI 290 (291)
Q Consensus 263 ~~d~vld~~g-----~---~~~~~~~~~~l~~~G~i 290 (291)
.+|+|+.+.- . +..+..+.+.|++||.+
T Consensus 94 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 129 (195)
T TIGR00477 94 DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYN 129 (195)
T ss_pred CCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEE
Confidence 6898876421 1 35677888899999973
No 270
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.15 Score=44.10 Aligned_cols=80 Identities=24% Similarity=0.322 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH----HHHHcCCce---EeCCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE----KAKAFGVTE---FLNPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~----~a~~~g~~~---~i~~~~~~~~~~~~~~~~~--~g 262 (291)
++++++|.|+ |++|..+++.+...|++.|+.++++.++.. .+++.+... ..|..+ .+.+.+.+.... .+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5688999987 899999999999999944999988776554 223344332 123332 122333333221 14
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
++|+++.+.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 79999999885
No 271
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.13 Score=46.37 Aligned_cols=79 Identities=23% Similarity=0.257 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc-----CCc-eE--eCCCCCCchHHHHHHHHh--
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF-----GVT-EF--LNPNDNNEPVQQVIKRIT-- 260 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~~-----g~~-~~--i~~~~~~~~~~~~~~~~~-- 260 (291)
++++++|+|+ +++|.+++..+...|+ +|+.+.++.++.+.+. ++ +.. .+ .|..+ ..+..+.+.++.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4688999987 8999999998888999 8998888877654332 22 111 12 23332 122333333332
Q ss_pred cCCccEEEEccCC
Q 022819 261 DGGADYSFECIGD 273 (291)
Q Consensus 261 ~g~~d~vld~~g~ 273 (291)
.+.+|+++.+.|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 2378999998874
No 272
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.42 E-value=0.2 Score=43.48 Aligned_cols=77 Identities=23% Similarity=0.315 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c----CCce-Ee--CCCCCCchHHHHHHHHhcCC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVTE-FL--NPNDNNEPVQQVIKRITDGG 263 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~----g~~~-~i--~~~~~~~~~~~~~~~~~~g~ 263 (291)
+++++||.|+ +++|..+++.+...|+ +|+.+++++++.+.+.+ + +... .+ |..+ ..+..+.+.++ +.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~--g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAEA--GD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHh--CC
Confidence 4689999987 8999999999989999 99999988776654321 1 3221 22 3322 23333333332 47
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++.+.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999998875
No 273
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.41 E-value=0.13 Score=46.30 Aligned_cols=45 Identities=29% Similarity=0.614 Sum_probs=38.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCC
Q 022819 195 STVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGV 239 (291)
Q Consensus 195 ~~vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~~g~ 239 (291)
.+|.|+|+|.+|.+.+..++..|. .+|+++++++++.+.+++.|.
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~ 52 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGL 52 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCC
Confidence 579999999999999998888884 379999999998888888775
No 274
>PLN03075 nicotianamine synthase; Provisional
Probab=95.41 E-value=0.082 Score=47.29 Aligned_cols=94 Identities=15% Similarity=0.093 Sum_probs=63.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCC-----ceEeCCCCCCchHHHHHHHHhcCCccE
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGV-----TEFLNPNDNNEPVQQVIKRITDGGADY 266 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~~g~-----~~~i~~~~~~~~~~~~~~~~~~g~~d~ 266 (291)
++++|+-+|+|+.++.++.+++.+.. .+++.+|.+++..+.+++.-. ..-+.+.. .+..+.... .+.||+
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~~~~~--l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMDVTES--LKEYDV 198 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhhcccc--cCCcCE
Confidence 77899999999999988888875532 389999999999988877431 11111111 122111101 247998
Q ss_pred EEEcc-------CChHHHHHHHHhhccCccc
Q 022819 267 SFECI-------GDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 267 vld~~-------g~~~~~~~~~~~l~~~G~i 290 (291)
||-.+ .-...+....+.|++||.+
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPGG~L 229 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPGALL 229 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCCcEE
Confidence 88764 2246788999999999975
No 275
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.41 E-value=0.17 Score=43.99 Aligned_cols=35 Identities=31% Similarity=0.456 Sum_probs=30.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022819 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (291)
Q Consensus 194 ~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~ 228 (291)
+.+|+|+|+|++|..++..+..+|..+++.+|.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 36799999999999999999999998888887543
No 276
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.12 Score=44.91 Aligned_cols=79 Identities=20% Similarity=0.276 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc-----CCce-Ee--CCCCCCchHHHHHHHHh--
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF-----GVTE-FL--NPNDNNEPVQQVIKRIT-- 260 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~~-----g~~~-~i--~~~~~~~~~~~~~~~~~-- 260 (291)
+++++||.|+ |++|..++..+...|+ +|+.+++++++.+.+. ++ +... .+ |..+ ..++...+.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 4688999987 8999999999999999 8999988877655432 22 2211 22 3322 233333333322
Q ss_pred cCCccEEEEccCC
Q 022819 261 DGGADYSFECIGD 273 (291)
Q Consensus 261 ~g~~d~vld~~g~ 273 (291)
.+.+|+++.+.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 2479999998884
No 277
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.40 E-value=0.16 Score=40.10 Aligned_cols=32 Identities=28% Similarity=0.511 Sum_probs=28.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 196 ~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
+|+|+|+|++|...+..+...|..++..+|.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 47899999999999999999999888888754
No 278
>PRK08589 short chain dehydrogenase; Validated
Probab=95.40 E-value=0.12 Score=45.49 Aligned_cols=79 Identities=23% Similarity=0.304 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH---cCCce---EeCCCCCCchHHHHHHHHh--cCC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE---FLNPNDNNEPVQQVIKRIT--DGG 263 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~---~g~~~---~i~~~~~~~~~~~~~~~~~--~g~ 263 (291)
+++++||.|+ +++|.++++.+...|+ +|+.++++++..+.+++ .+... ..|..+ ..+....+.+.. .+.
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence 4678999987 8999999998888999 89999888333233333 23221 233332 123333333332 247
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++.+.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998874
No 279
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.21 Score=43.67 Aligned_cols=79 Identities=23% Similarity=0.270 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g 262 (291)
+++++||.|+ |++|..+++.+...|+ +|+.+++++++.+.. .+.+... . .|..+ ..+....+++.. .+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999987 8999999999999999 899998887765433 2223221 2 23332 233334444432 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
++|+++.+.|.
T Consensus 86 ~iD~vi~~ag~ 96 (264)
T PRK07576 86 PIDVLVSGAAG 96 (264)
T ss_pred CCCEEEECCCC
Confidence 78999988763
No 280
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.39 E-value=0.2 Score=43.39 Aligned_cols=79 Identities=22% Similarity=0.341 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHHcCCce-E--eCCCCCCchHHHHHHHHh--cCCc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CEKAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGA 264 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~--~~~a~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g~~ 264 (291)
+++++||.|+ +++|.++++.+...|+ +|+.+++++.. .+.+++.+... . .|..+ +.+..+.+.+.. .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4788999987 8999999999999999 88888765422 22334444332 2 24332 233333333322 2479
Q ss_pred cEEEEccCC
Q 022819 265 DYSFECIGD 273 (291)
Q Consensus 265 d~vld~~g~ 273 (291)
|+++.+.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999998874
No 281
>PRK00811 spermidine synthase; Provisional
Probab=95.38 E-value=0.081 Score=47.16 Aligned_cols=93 Identities=14% Similarity=0.118 Sum_probs=61.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC------C---ceE-eCCCCCCchHHHHHHHHhc
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG------V---TEF-LNPNDNNEPVQQVIKRITD 261 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g------~---~~~-i~~~~~~~~~~~~~~~~~~ 261 (291)
.++++||++|+|. |..+..+++..+.++|.+++.+++-.+.+++.- . +.+ +.. .+..+.+.. ..
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~----~Da~~~l~~-~~ 148 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI----GDGIKFVAE-TE 148 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE----CchHHHHhh-CC
Confidence 4568899998763 666667777767779999999999888887631 1 111 111 233344443 34
Q ss_pred CCccEEEEccCC----------hHHHHHHHHhhccCccc
Q 022819 262 GGADYSFECIGD----------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 262 g~~d~vld~~g~----------~~~~~~~~~~l~~~G~i 290 (291)
+.+|+|+--... .+.++.+.+.|+++|.+
T Consensus 149 ~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvl 187 (283)
T PRK00811 149 NSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIF 187 (283)
T ss_pred CcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEE
Confidence 489987753211 34567888999999975
No 282
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.38 E-value=0.11 Score=46.04 Aligned_cols=80 Identities=16% Similarity=0.193 Sum_probs=53.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCc------eEeCCCCCCch---HHHHHH
Q 022819 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT------EFLNPNDNNEP---VQQVIK 257 (291)
Q Consensus 192 ~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~------~~i~~~~~~~~---~~~~~~ 257 (291)
-+++++||.|+ .++|.+++..+...|+ +|+.+++++++.+...+ .+.. ...|... +++ ..+...
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK-EVDVEKLVEFAV 83 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC-HHHHHHHHHHHH
Confidence 36788999987 7999999999999999 99999999887655432 2222 1233332 122 222223
Q ss_pred HHhcCCccEEEEccCC
Q 022819 258 RITDGGADYSFECIGD 273 (291)
Q Consensus 258 ~~~~g~~d~vld~~g~ 273 (291)
+...|.+|+.+++.|.
T Consensus 84 ~~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGA 99 (270)
T ss_pred HHhCCCCCEEEEcCCc
Confidence 3334689999998875
No 283
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.38 E-value=0.13 Score=47.08 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=31.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~ 228 (291)
.+.+|+|+|+|++|..++..+..+|..++..+|.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 346799999999999999999999998888888753
No 284
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.12 Score=44.49 Aligned_cols=79 Identities=22% Similarity=0.290 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc--CCc-eEe--CCCCCCchHHHHHHHHh--cCC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF--GVT-EFL--NPNDNNEPVQQVIKRIT--DGG 263 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~~--g~~-~~i--~~~~~~~~~~~~~~~~~--~g~ 263 (291)
++++++|.|+ |.+|..+++.+...|+ +|+.+.++.++.+... ++ +.. ..+ |..+ .....+.+.+.. .+.
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS-AEAVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 4678999987 9999999998888898 8999988876654332 22 222 122 3322 123333333322 147
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 8999998884
No 285
>PRK08643 acetoin reductase; Validated
Probab=95.37 E-value=0.17 Score=43.73 Aligned_cols=78 Identities=18% Similarity=0.280 Sum_probs=50.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCce-Ee--CCCCCCchHHHHHHHHh--cCC
Q 022819 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FL--NPNDNNEPVQQVIKRIT--DGG 263 (291)
Q Consensus 194 ~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~-~i--~~~~~~~~~~~~~~~~~--~g~ 263 (291)
++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+.+ .+... .+ |..+ .+...+.+.+.. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 568899987 8999999999999999 89999888776544322 23222 22 3322 123333333322 247
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++.+.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 286
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.36 E-value=0.14 Score=44.39 Aligned_cols=79 Identities=23% Similarity=0.414 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCce-E--eCCCCCCchHHHHHHHHhc--C
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~----~~g~~~-~--i~~~~~~~~~~~~~~~~~~--g 262 (291)
+++++||.|+ |.+|..+++.+...|+ +|+.++++.++.+.+. ..+... . .|..+ .+++.+.+.+... +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4688999987 9999999999988999 8999998887765443 223221 2 23332 2333333333222 3
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 287
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.35 E-value=0.14 Score=44.42 Aligned_cols=79 Identities=20% Similarity=0.275 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-Ee--CCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g 262 (291)
+++++||.|+ |.+|..++..+...|+ +|+.+++++++.+.+ ++.+... .+ |..+ ...+.+.+.+.. .+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4689999987 9999999999999999 888888888655433 3334332 22 3322 122223333221 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998875
No 288
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.14 Score=44.95 Aligned_cols=77 Identities=26% Similarity=0.313 Sum_probs=51.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCce-E--eCCCCCCchHHHHHHHHh--cCCccEE
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTE-F--LNPNDNNEPVQQVIKRIT--DGGADYS 267 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~-g~~~-~--i~~~~~~~~~~~~~~~~~--~g~~d~v 267 (291)
+++||+|+ |.+|..+++.+...|. +|+++.+++++.+.+++. +... + .|..+ ...+.+.+.+.. .+++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 57899987 9999999998888898 899998988877665442 2211 1 23332 122333333322 2478999
Q ss_pred EEccCC
Q 022819 268 FECIGD 273 (291)
Q Consensus 268 ld~~g~ 273 (291)
|.+.|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 998874
No 289
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=95.34 E-value=0.05 Score=48.58 Aligned_cols=90 Identities=19% Similarity=0.197 Sum_probs=61.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCceEeCCCCCCchHHHHHHHHhcCCccEEEEccC
Q 022819 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (291)
Q Consensus 194 ~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~-g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g 272 (291)
..+|.|+|.|.+|.-+..+|.-+|+ .|..++.+.+|++.++.+ +.....-+.. ..++.+.++ .+|+++..+=
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st-~~~iee~v~-----~aDlvIgaVL 240 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST-PSNIEEAVK-----KADLVIGAVL 240 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC-HHHHHHHhh-----hccEEEEEEE
Confidence 3457788999999999999999999 999999999999988764 4432222211 133433333 3677776431
Q ss_pred --C----hHHHHHHHHhhccCccc
Q 022819 273 --D----TGMITTALQSCCDVRSI 290 (291)
Q Consensus 273 --~----~~~~~~~~~~l~~~G~i 290 (291)
+ ....++.++.|++|+.|
T Consensus 241 IpgakaPkLvt~e~vk~MkpGsVi 264 (371)
T COG0686 241 IPGAKAPKLVTREMVKQMKPGSVI 264 (371)
T ss_pred ecCCCCceehhHHHHHhcCCCcEE
Confidence 1 23466778888888654
No 290
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.33 E-value=0.14 Score=45.29 Aligned_cols=79 Identities=25% Similarity=0.293 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-Ee--CCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g 262 (291)
+++++||.|+ |++|.+++..+...|+ +|+.+++++++++.+ +..+... .+ |..+ ..++.+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 4678999987 8999999999999999 888888887665533 2234322 22 3322 123333333321 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 78999998874
No 291
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.29 E-value=0.14 Score=44.21 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=29.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 194 ~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
+.+|+|+|+|++|..++..+-..|..+++.+|.+
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4679999999999999999999999899888754
No 292
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.29 E-value=0.15 Score=44.74 Aligned_cols=76 Identities=22% Similarity=0.316 Sum_probs=48.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce----EeCCCCCCchHHHHHHHHh--cCCc
Q 022819 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE----FLNPNDNNEPVQQVIKRIT--DGGA 264 (291)
Q Consensus 196 ~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~----~i~~~~~~~~~~~~~~~~~--~g~~ 264 (291)
+++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... ..|..+ .......+.+.. .+++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCCC
Confidence 6889987 9999999999989998 888888887665433 2233322 234432 122222233322 2378
Q ss_pred cEEEEccCC
Q 022819 265 DYSFECIGD 273 (291)
Q Consensus 265 d~vld~~g~ 273 (291)
|+++.+.|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999999874
No 293
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.28 E-value=0.24 Score=42.63 Aligned_cols=36 Identities=33% Similarity=0.492 Sum_probs=32.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCC--eEEEEcCC
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGAS--RIIGVDTN 227 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~--~vi~~~~~ 227 (291)
-++.+++|+|+|..|..++..+...|+. +++.++++
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 4567999999999999999999999997 89999887
No 294
>PRK05717 oxidoreductase; Validated
Probab=95.28 E-value=0.18 Score=43.59 Aligned_cols=79 Identities=23% Similarity=0.322 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCce-E--eCCCCCCchHHHHHHHHhc--CCcc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRITD--GGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~~~-~--i~~~~~~~~~~~~~~~~~~--g~~d 265 (291)
++++++|+|+ |.+|..++..+...|+ +|+.++++.++.+.+ ++++... . .|..+ ..+..+.+.+... +.+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4688999987 9999999999988998 888888776654433 4444322 2 23322 1233333333322 3689
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998875
No 295
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.28 E-value=0.16 Score=43.22 Aligned_cols=35 Identities=29% Similarity=0.355 Sum_probs=30.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
+..+|+|+|+|++|..+++.+...|..+++.+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 44679999999999999999999999889998876
No 296
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.26 E-value=0.14 Score=46.86 Aligned_cols=35 Identities=26% Similarity=0.429 Sum_probs=30.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
...+|+|+|+|++|..++..+...|..++..+|.+
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34679999999999999999999999899999875
No 297
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.23 E-value=0.11 Score=45.13 Aligned_cols=79 Identities=19% Similarity=0.276 Sum_probs=50.2
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCc--eE--eCCCCCCchHHHHHHHHh--cCC
Q 022819 193 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT--EF--LNPNDNNEPVQQVIKRIT--DGG 263 (291)
Q Consensus 193 ~~~~vlV~G~g---~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~--~~--i~~~~~~~~~~~~~~~~~--~g~ 263 (291)
++++++|.|++ ++|.++++.+...|+ +|+.+.++++..+.++++... .. .|..+ .++..+.+.+.. .+.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhCC
Confidence 57889999864 899999999988999 888888775434444444221 12 23332 233333333322 247
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++.+.|.
T Consensus 84 iD~lv~nAg~ 93 (252)
T PRK06079 84 IDGIVHAIAY 93 (252)
T ss_pred CCEEEEcccc
Confidence 9999998874
No 298
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.22 E-value=0.11 Score=44.88 Aligned_cols=75 Identities=23% Similarity=0.354 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCc-eE--eCCCCCCchHHHHHHHHh--cCCccE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EF--LNPNDNNEPVQQVIKRIT--DGGADY 266 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~-~~--i~~~~~~~~~~~~~~~~~--~g~~d~ 266 (291)
+++++||.|+ |++|..+++.+...|+ +|+.+++++++ +..+.. .. .|..+ ..+..+.+.+.. .+.+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD-PDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4788999987 8999999999988999 89999887655 112221 12 23322 123333333322 247899
Q ss_pred EEEccCC
Q 022819 267 SFECIGD 273 (291)
Q Consensus 267 vld~~g~ 273 (291)
++.+.|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9998874
No 299
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.16 Score=44.17 Aligned_cols=77 Identities=21% Similarity=0.314 Sum_probs=49.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-Ee--CCCCCCchHHHHHHHHhc--CCc
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRITD--GGA 264 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~i--~~~~~~~~~~~~~~~~~~--g~~ 264 (291)
.++||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +..+... ++ |..+ ...+...+.+... +++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD-AEACERLIEAAVARFGGI 79 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 57899987 9999999999999998 899999887665433 2233322 22 3222 1333333333321 378
Q ss_pred cEEEEccCC
Q 022819 265 DYSFECIGD 273 (291)
Q Consensus 265 d~vld~~g~ 273 (291)
|+++.+.|.
T Consensus 80 d~vi~~ag~ 88 (263)
T PRK06181 80 DILVNNAGI 88 (263)
T ss_pred CEEEECCCc
Confidence 999999874
No 300
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.15 Score=44.38 Aligned_cols=73 Identities=21% Similarity=0.336 Sum_probs=46.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHHcCCceE--eCCCCCCchHHHHHHHHhcCCccEEE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEF--LNPNDNNEPVQQVIKRITDGGADYSF 268 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~-~~~~~a~~~g~~~~--i~~~~~~~~~~~~~~~~~~g~~d~vl 268 (291)
.+++++|.|+ |++|..+++.+...|+ +|+++++++ ++.+... .+.... .|..+ .+ .+.+. -+.+|+++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~--~~---~~~~~-~~~iDilV 84 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECGK--EE---SLDKQ-LASLDVLI 84 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCCC--HH---HHHHh-cCCCCEEE
Confidence 3578999987 8999999999999999 888888765 2222211 111122 23322 21 22222 24699999
Q ss_pred EccCC
Q 022819 269 ECIGD 273 (291)
Q Consensus 269 d~~g~ 273 (291)
++.|.
T Consensus 85 nnAG~ 89 (245)
T PRK12367 85 LNHGI 89 (245)
T ss_pred ECCcc
Confidence 99875
No 301
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.20 E-value=0.15 Score=45.95 Aligned_cols=78 Identities=24% Similarity=0.298 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcC---Cc-eE--eCCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFG---VT-EF--LNPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g---~~-~~--i~~~~~~~~~~~~~~~~~--~g 262 (291)
++++++|+|+ |++|..+++.+...|+ +|+.++++.++.+.+ +++. .. .. .|..+ ..+..+.+.++. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 4678999987 9999999998888998 899998888775543 3332 11 12 23322 122333333321 23
Q ss_pred CccEEEEccC
Q 022819 263 GADYSFECIG 272 (291)
Q Consensus 263 ~~d~vld~~g 272 (291)
.+|+++.+.|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999887
No 302
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.18 E-value=0.13 Score=47.75 Aligned_cols=72 Identities=28% Similarity=0.531 Sum_probs=45.9
Q ss_pred EEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH--cCC--ce-EeCCCCCCchHHHHHHHHhcCCccEEEEc
Q 022819 197 VVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA--FGV--TE-FLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (291)
Q Consensus 197 vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~--~g~--~~-~i~~~~~~~~~~~~~~~~~~g~~d~vld~ 270 (291)
|+|+|+|.+|..+++.+....- .+|++.+++.++.+.+.+ .+. .. .+|..+ . +.+.++.. +.|+|++|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~--~---~~l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND--P---ESLAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT--H---HHHHHHHT-TSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC--H---HHHHHHHh-cCCEEEEC
Confidence 6788889999999999887764 379999999999776653 222 11 233322 2 22444433 46999999
Q ss_pred cCCh
Q 022819 271 IGDT 274 (291)
Q Consensus 271 ~g~~ 274 (291)
+|..
T Consensus 75 ~gp~ 78 (386)
T PF03435_consen 75 AGPF 78 (386)
T ss_dssp SSGG
T ss_pred Cccc
Confidence 9975
No 303
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.18 Score=43.56 Aligned_cols=78 Identities=19% Similarity=0.283 Sum_probs=50.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCC--ceE--eCCCCCCchHHHHHHHHhc--CCcc
Q 022819 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--TEF--LNPNDNNEPVQQVIKRITD--GGAD 265 (291)
Q Consensus 194 ~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~--~~~--i~~~~~~~~~~~~~~~~~~--g~~d 265 (291)
++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ +++.. ... .|..+ ..++...+.+... +++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 468999987 8999999988888898 899998887766543 33321 112 23322 1223333333221 3689
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
No 304
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.16 Score=43.76 Aligned_cols=79 Identities=19% Similarity=0.318 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCc-eEe--CCCCCCchHHHHHHHHhc--C
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFL--NPNDNNEPVQQVIKRITD--G 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~-~~i--~~~~~~~~~~~~~~~~~~--g 262 (291)
++++++|.|+ |.+|..+++.+...|+ +|+.++++.++.+.+.+ .+.. ..+ |..+ ..+....+.+... +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 3578999987 8999999999999999 99999988776544322 2322 122 3322 1223333333221 3
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 85 ~id~li~~ag~ 95 (252)
T PRK07035 85 RLDILVNNAAA 95 (252)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 305
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.2 Score=43.08 Aligned_cols=75 Identities=13% Similarity=0.168 Sum_probs=48.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCc-eE--eCCCCCCchHHHHHHHHhcCCccEEEEc
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EF--LNPNDNNEPVQQVIKRITDGGADYSFEC 270 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~-~~--i~~~~~~~~~~~~~~~~~~g~~d~vld~ 270 (291)
.+++|.|+ |++|...+..+...|+ +|+.+++++++.+.+.+.+.. .. .|..+ .++..+.+++. ....|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~-~~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD-HPGTKAALSQL-PFIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC-HHHHHHHHHhc-ccCCCEEEEc
Confidence 56889987 9999998888888999 899999988887766543321 12 23332 23333333332 2245776666
Q ss_pred cC
Q 022819 271 IG 272 (291)
Q Consensus 271 ~g 272 (291)
.|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 65
No 306
>PRK01581 speE spermidine synthase; Validated
Probab=95.16 E-value=0.27 Score=45.23 Aligned_cols=94 Identities=13% Similarity=0.095 Sum_probs=61.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC-----------ceE-eCCCCCCchHHHHHHH
Q 022819 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-----------TEF-LNPNDNNEPVQQVIKR 258 (291)
Q Consensus 191 ~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~-----------~~~-i~~~~~~~~~~~~~~~ 258 (291)
....++|||+|+| .|.++..+++..+.++|++++.+++-.+.++++.. +.+ +.. .+..+.+.+
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi----~Da~~fL~~ 222 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHV----CDAKEFLSS 222 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEE----CcHHHHHHh
Confidence 3556799999875 56667777776666699999999999999986310 111 101 233444543
Q ss_pred HhcCCccEEEEccCC-----------hHHHHHHHHhhccCccc
Q 022819 259 ITDGGADYSFECIGD-----------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 259 ~~~g~~d~vld~~g~-----------~~~~~~~~~~l~~~G~i 290 (291)
..+.+|+||--... .+.++.+.+.|+++|.+
T Consensus 223 -~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~ 264 (374)
T PRK01581 223 -PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAF 264 (374)
T ss_pred -cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEE
Confidence 23479976654322 34678889999999975
No 307
>PRK08264 short chain dehydrogenase; Validated
Probab=95.15 E-value=0.11 Score=44.32 Aligned_cols=75 Identities=21% Similarity=0.325 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCce-Ee--CCCCCCchHHHHHHHHhcCCccEEE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FL--NPNDNNEPVQQVIKRITDGGADYSF 268 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~-~i--~~~~~~~~~~~~~~~~~~g~~d~vl 268 (291)
.+++++|+|+ |.+|..+++.+...|.++|+.++++.++.+. .+... ++ |..+ .+++.+.+... +.+|+++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~-~~~~~~~~~~~--~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD-PASVAAAAEAA--SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC-HHHHHHHHHhc--CCCCEEE
Confidence 4578999986 9999999999999998678888887766543 22221 22 3322 12222222221 3689999
Q ss_pred EccCC
Q 022819 269 ECIGD 273 (291)
Q Consensus 269 d~~g~ 273 (291)
.+.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 98876
No 308
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.14 E-value=0.34 Score=39.31 Aligned_cols=43 Identities=28% Similarity=0.461 Sum_probs=36.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 022819 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (291)
Q Consensus 196 ~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~ 239 (291)
+|-++|.|.+|...+.-+...|. .|.+.++++++.+.+.+.|+
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~ 45 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGA 45 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTE
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhh
Confidence 67889999999999999999999 99999999999888877663
No 309
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.18 Score=43.85 Aligned_cols=79 Identities=28% Similarity=0.359 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc---CCce-Ee--CCCCCCchHHHHHHHHh--cCC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF---GVTE-FL--NPNDNNEPVQQVIKRIT--DGG 263 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~---g~~~-~i--~~~~~~~~~~~~~~~~~--~g~ 263 (291)
++++++|+|+ |.+|..++..+...|+ +|+.++++++..+.++++ +... .+ |..+ ..+....+.+.. .+.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 4688999987 9999999999999999 899998877544433332 3221 22 3322 122333333322 247
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999998884
No 310
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.12 E-value=0.16 Score=50.50 Aligned_cols=78 Identities=21% Similarity=0.380 Sum_probs=58.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCC
Q 022819 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (291)
Q Consensus 194 ~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~ 273 (291)
.+.|+|.|.|.+|+.+++.++..|. .++++|.++++.+.+++.|...++ -+ ..-.+.+++..-..+|.++-+++.
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GD---at~~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GD---ATRMDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-Ee---CCCHHHHHhcCCCcCCEEEEEeCC
Confidence 3679999999999999999999999 899999999999999998865433 11 112234444433378999988887
Q ss_pred hHH
Q 022819 274 TGM 276 (291)
Q Consensus 274 ~~~ 276 (291)
.+.
T Consensus 475 ~~~ 477 (621)
T PRK03562 475 PQT 477 (621)
T ss_pred HHH
Confidence 443
No 311
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.18 Score=43.28 Aligned_cols=78 Identities=24% Similarity=0.343 Sum_probs=50.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----c--CCce-E--eCCCCCCchHHHHHHHHh--c
Q 022819 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F--GVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (291)
Q Consensus 194 ~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~--g~~~-~--i~~~~~~~~~~~~~~~~~--~ 261 (291)
+++++|.|+ |++|..++..+...|+ +|+.+++++++.+.+.. . +... + .|..+ ..++.+.+.+.. .
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 468999987 9999999988888898 89998888877654422 1 2211 2 23332 233333344332 2
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+++|+++.+.|.
T Consensus 80 ~~id~vi~~ag~ 91 (248)
T PRK08251 80 GGLDRVIVNAGI 91 (248)
T ss_pred CCCCEEEECCCc
Confidence 478999998873
No 312
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.10 E-value=0.19 Score=43.50 Aligned_cols=79 Identities=22% Similarity=0.388 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCce-Ee--CCCCCCchHHHHHHHHh--cCCcc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g~~d 265 (291)
.++++||.|+ |.+|...++.+...|+ +|+.++++.++.+.+. +++... .+ |..+ ..+....+.+.. .+.+|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR-QDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 3578999987 9999999999999999 8999998887765543 333221 22 3222 233333333322 24789
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 83 ~li~~ag~ 90 (257)
T PRK07067 83 ILFNNAAL 90 (257)
T ss_pred EEEECCCc
Confidence 99998774
No 313
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.10 E-value=0.22 Score=43.11 Aligned_cols=78 Identities=21% Similarity=0.293 Sum_probs=49.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-H----cCC--ceEe--CCCCCCchHHHHHHHHh--c
Q 022819 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A----FGV--TEFL--NPNDNNEPVQQVIKRIT--D 261 (291)
Q Consensus 194 ~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~----~g~--~~~i--~~~~~~~~~~~~~~~~~--~ 261 (291)
++++||.|+ |.+|..++..+...|+ +|+.++++.++.+.+. + .+. ...+ |..+ ..+....+.+.. .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 468999987 8999999999988999 8999988876554332 2 221 1122 3322 122333333322 2
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+.+|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 478999998874
No 314
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.21 Score=43.84 Aligned_cols=77 Identities=19% Similarity=0.322 Sum_probs=50.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCC--c-eE--eCCCCCCchHHHHHHHHhc--
Q 022819 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGV--T-EF--LNPNDNNEPVQQVIKRITD-- 261 (291)
Q Consensus 194 ~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~--~-~~--i~~~~~~~~~~~~~~~~~~-- 261 (291)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ .+. . .+ .|..+ ..++.. +.+...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKEI 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHhc
Confidence 568899987 9999999998888999 89999888776544322 221 1 12 23332 223333 443322
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+.+|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 478999998874
No 315
>PRK09186 flagellin modification protein A; Provisional
Probab=95.08 E-value=0.2 Score=43.22 Aligned_cols=78 Identities=22% Similarity=0.425 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHc----CCce----EeCCCCCCchHHHHHHHHhc-
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF----GVTE----FLNPNDNNEPVQQVIKRITD- 261 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~----g~~~----~i~~~~~~~~~~~~~~~~~~- 261 (291)
+++++||.|+ |.+|...+..+...|+ +|+.+.+++++.+.+ +++ +... ..|..+ ..++.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence 4688999987 8999999999999999 899998887765543 222 2211 223332 2333333443221
Q ss_pred -CCccEEEEccC
Q 022819 262 -GGADYSFECIG 272 (291)
Q Consensus 262 -g~~d~vld~~g 272 (291)
+++|+++.+.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 46899999875
No 316
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.07 E-value=0.23 Score=44.38 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=31.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~ 228 (291)
++++++|+|+|++|++++..+...|+++|+.+.++.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 568899999999999999888899996698888875
No 317
>PLN02253 xanthoxin dehydrogenase
Probab=95.07 E-value=0.16 Score=44.63 Aligned_cols=79 Identities=18% Similarity=0.220 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCC--c-eE--eCCCCCCchHHHHHHHHh--cCC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--T-EF--LNPNDNNEPVQQVIKRIT--DGG 263 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~--~-~~--i~~~~~~~~~~~~~~~~~--~g~ 263 (291)
.++++||.|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++. . .. .|..+ .+...+.+.+.. .++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 4678999987 8999999998888899 899998876654433 33321 1 12 23332 122333333221 147
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++.+.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 318
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.18 Score=45.10 Aligned_cols=79 Identities=19% Similarity=0.246 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHc-----CCce-Ee--CCCCCCchHHHHHHHHhc-
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF-----GVTE-FL--NPNDNNEPVQQVIKRITD- 261 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~-----g~~~-~i--~~~~~~~~~~~~~~~~~~- 261 (291)
.++++||.|+ |++|..+++.+...|+ +|+.+.++.++.+.+ +++ +... .+ |..+ ..+..+.+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHhh
Confidence 5688999987 9999999998888899 888888887765432 121 1111 22 3322 1333333443322
Q ss_pred -CCccEEEEccCC
Q 022819 262 -GGADYSFECIGD 273 (291)
Q Consensus 262 -g~~d~vld~~g~ 273 (291)
+.+|+++.+.|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 378999998874
No 319
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.06 E-value=0.19 Score=43.18 Aligned_cols=73 Identities=22% Similarity=0.371 Sum_probs=54.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH--HcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCC
Q 022819 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK--AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (291)
Q Consensus 196 ~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~--~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~ 273 (291)
+++|+|+|.+|...++.+...|. .|+.++.++++.+... ++....+. -+ ..-.+.++++.-..+|+++-++|.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~-gd---~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVI-GD---ATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEE-ec---CCCHHHHHhcCCCcCCEEEEeeCC
Confidence 57889999999999999999998 9999999999877733 35443332 22 222345666533489999998887
No 320
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.04 E-value=0.19 Score=44.19 Aligned_cols=79 Identities=29% Similarity=0.383 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HH---cCCce-E--eCCCCCCchHHHHHHHHhc--C
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA---FGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~---~g~~~-~--i~~~~~~~~~~~~~~~~~~--g 262 (291)
++++++|.|+ |++|++++..+...|+ +|+.+++++++.+.+ ++ .+... . .|..+ ..+....+.+... +
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4688999987 8999999999999999 899998887655433 22 23221 2 23322 1233333333222 4
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 87 ~id~li~~ag~ 97 (278)
T PRK08277 87 PCDILINGAGG 97 (278)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 321
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.03 E-value=0.19 Score=43.59 Aligned_cols=79 Identities=16% Similarity=0.265 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH-H---HHHcCCce-Ee--CCCCCCchHHHHHHHHh--c
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCE-K---AKAFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~-~~~-~---a~~~g~~~-~i--~~~~~~~~~~~~~~~~~--~ 261 (291)
+++++||.|+ +++|..+++.+...|+ +|+.++++++ ..+ . ++..+... .+ |..+ +++..+.+.+.. .
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS-KADLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4678999987 8999999999999999 8888877643 222 2 22334322 22 3322 233333333322 2
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+.+|+++.+.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 478999999884
No 322
>PLN00203 glutamyl-tRNA reductase
Probab=95.03 E-value=0.14 Score=49.48 Aligned_cols=73 Identities=16% Similarity=0.343 Sum_probs=51.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcC-Cce-EeCCCCCCchHHHHHHHHhcCCccEEEE
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFG-VTE-FLNPNDNNEPVQQVIKRITDGGADYSFE 269 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~~g-~~~-~i~~~~~~~~~~~~~~~~~~g~~d~vld 269 (291)
.+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+. +++ ... ++.. .+..+.+ ..+|+||.
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~----~dl~~al-----~~aDVVIs 335 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPL----DEMLACA-----AEADVVFT 335 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecH----hhHHHHH-----hcCCEEEE
Confidence 3688999999999999999999999878999999988866554 453 211 1121 1221222 26899999
Q ss_pred ccCCh
Q 022819 270 CIGDT 274 (291)
Q Consensus 270 ~~g~~ 274 (291)
+++.+
T Consensus 336 AT~s~ 340 (519)
T PLN00203 336 STSSE 340 (519)
T ss_pred ccCCC
Confidence 98763
No 323
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.02 E-value=0.18 Score=43.16 Aligned_cols=79 Identities=20% Similarity=0.269 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-Ee--CCCCCCchHHHHHHHHhc--C
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRITD--G 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~i--~~~~~~~~~~~~~~~~~~--g 262 (291)
.++++||+|+ |.+|...+..+...|. +|++++++.++...+ ++.+... .+ |..+ ..++...+.+... +
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 4578999987 9999999998888898 899998886554332 2233222 22 3322 1233333333221 3
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.+.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998865
No 324
>PLN02244 tocopherol O-methyltransferase
Probab=95.02 E-value=0.048 Score=49.96 Aligned_cols=90 Identities=20% Similarity=0.306 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCce---EeCCCCCCchHHHHHHHHhcCCc
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTE---FLNPNDNNEPVQQVIKRITDGGA 264 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~----g~~~---~i~~~~~~~~~~~~~~~~~~g~~ 264 (291)
+++++||-+|+| .|..+..+++..|+ +|++++.+++..+.+++. +... ++..+. .+. .+.++.|
T Consensus 117 ~~~~~VLDiGCG-~G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~--~~~-----~~~~~~F 187 (340)
T PLN02244 117 KRPKRIVDVGCG-IGGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA--LNQ-----PFEDGQF 187 (340)
T ss_pred CCCCeEEEecCC-CCHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc--ccC-----CCCCCCc
Confidence 678899999986 46677788887788 999999999887776553 3211 221111 110 1223478
Q ss_pred cEEEEccCC------hHHHHHHHHhhccCccc
Q 022819 265 DYSFECIGD------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 265 d~vld~~g~------~~~~~~~~~~l~~~G~i 290 (291)
|+|+-.-.. ...+.++.+.|++||+|
T Consensus 188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~l 219 (340)
T PLN02244 188 DLVWSMESGEHMPDKRKFVQELARVAAPGGRI 219 (340)
T ss_pred cEEEECCchhccCCHHHHHHHHHHHcCCCcEE
Confidence 988853221 35678899999999986
No 325
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=95.02 E-value=0.18 Score=49.38 Aligned_cols=74 Identities=15% Similarity=0.298 Sum_probs=55.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCC
Q 022819 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (291)
Q Consensus 195 ~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~ 273 (291)
+.++|.|.|.+|+..++.++..|. .++++|.++++.+.+++.|...+.-.. .-.+.+++..-..+|.++-+++.
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~----~~~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNA----ANEEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCC----CCHHHHHhcCccccCEEEEEcCC
Confidence 678999999999999999999998 899999999999999988866544221 11233444322378877777665
No 326
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.02 E-value=0.19 Score=43.84 Aligned_cols=79 Identities=16% Similarity=0.294 Sum_probs=48.7
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCceEe--CCCCCCchHHHHHHHHh--c
Q 022819 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFL--NPNDNNEPVQQVIKRIT--D 261 (291)
Q Consensus 193 ~~~~vlV~G~---g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~~i--~~~~~~~~~~~~~~~~~--~ 261 (291)
+++++||.|+ +++|++.++.+...|+ +|+.+.+.+...+.+++ .+....+ |..+ .++..+.+.+.. .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS-DDEINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC-HHHHHHHHHHHHHHh
Confidence 5678999983 5899999999989999 88877655432233322 2332222 3332 233333333322 2
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+++|+++++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 479999999875
No 327
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.00 E-value=0.16 Score=44.26 Aligned_cols=35 Identities=31% Similarity=0.477 Sum_probs=30.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
...+|+|+|+|++|..++..+...|..++..+|.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45789999999999999999999999888888653
No 328
>PRK09242 tropinone reductase; Provisional
Probab=95.00 E-value=0.2 Score=43.35 Aligned_cols=79 Identities=20% Similarity=0.304 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc-----CCce-Ee--CCCCCCchHHHHHHHHh--
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF-----GVTE-FL--NPNDNNEPVQQVIKRIT-- 260 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~~-----g~~~-~i--~~~~~~~~~~~~~~~~~-- 260 (291)
++++++|.|+ |++|..++..+...|+ +|+.++++.++.+.+. ++ +... .+ |..+ ..+....+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence 4788999987 8999999999999999 8999988887655442 21 2222 22 3322 123333333322
Q ss_pred cCCccEEEEccCC
Q 022819 261 DGGADYSFECIGD 273 (291)
Q Consensus 261 ~g~~d~vld~~g~ 273 (291)
.+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 2479999999885
No 329
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.00 E-value=0.19 Score=42.91 Aligned_cols=80 Identities=21% Similarity=0.327 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-EeCCCCC-CchHHHHHHHHhc--CC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FLNPNDN-NEPVQQVIKRITD--GG 263 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~i~~~~~-~~~~~~~~~~~~~--g~ 263 (291)
.+.+++|.|+ |.+|..++..+...|+ +|+.+++++++.+.+ +..+... .+..+.. ..++.+.+++... ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999987 8999999998888999 899999887665433 2223222 2222211 1233333333221 37
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998874
No 330
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.00 E-value=0.23 Score=43.08 Aligned_cols=76 Identities=25% Similarity=0.365 Sum_probs=49.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-H---cCCceEe--CCCCCCchHHHHHHHHh--cCCccE
Q 022819 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A---FGVTEFL--NPNDNNEPVQQVIKRIT--DGGADY 266 (291)
Q Consensus 196 ~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~---~g~~~~i--~~~~~~~~~~~~~~~~~--~g~~d~ 266 (291)
++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+. + .+....+ |..+ .++..+.+.+.. .+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD-KDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC-HHHHHHHHHHHHHhcCCCCE
Confidence 5889987 8999999999988999 8999988887654432 2 2322222 3322 133333333322 247899
Q ss_pred EEEccCC
Q 022819 267 SFECIGD 273 (291)
Q Consensus 267 vld~~g~ 273 (291)
++.+.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998874
No 331
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.00 E-value=0.23 Score=42.88 Aligned_cols=79 Identities=24% Similarity=0.377 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g 262 (291)
++++++|.|+ |.+|..++..+...|+ +|+.+++++++.+.+ ++.+... . .|..+ +.++...+.+.. .+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5789999987 8999999988888899 899999887765433 2334222 2 23332 233333333332 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 78999998885
No 332
>PRK06849 hypothetical protein; Provisional
Probab=95.00 E-value=0.21 Score=46.48 Aligned_cols=92 Identities=17% Similarity=0.182 Sum_probs=59.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceE--eC-CCCCCchHHHHHHHHhcC-CccEE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF--LN-PNDNNEPVQQVIKRITDG-GADYS 267 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~--i~-~~~~~~~~~~~~~~~~~g-~~d~v 267 (291)
...+|||+|+ .+.++..++.++..|. +|++++.++.......+ .++.. +. .+.+.+.+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 4588999998 5799999999999999 99999887654432222 12222 21 222235577777777666 89999
Q ss_pred EEccCChHHHHHHHHhhcc
Q 022819 268 FECIGDTGMITTALQSCCD 286 (291)
Q Consensus 268 ld~~g~~~~~~~~~~~l~~ 286 (291)
+-+......+....+.+..
T Consensus 81 IP~~e~~~~~a~~~~~l~~ 99 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSA 99 (389)
T ss_pred EECChHHHhHHhhhhhhcC
Confidence 9776543223333344433
No 333
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.98 E-value=0.29 Score=42.84 Aligned_cols=79 Identities=25% Similarity=0.397 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHc---C--Cc-eEe--CCCCCCchHHHHHHHHhc-
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF---G--VT-EFL--NPNDNNEPVQQVIKRITD- 261 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~---g--~~-~~i--~~~~~~~~~~~~~~~~~~- 261 (291)
+++++||.|+ |.+|..+++.+...|+ +|+.+.++.++.+.. +++ + .. .++ |..+ ..+....+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 3678999987 9999999999999999 899998887664432 222 1 11 122 3322 1233333333221
Q ss_pred -CCccEEEEccCC
Q 022819 262 -GGADYSFECIGD 273 (291)
Q Consensus 262 -g~~d~vld~~g~ 273 (291)
+++|+++.+.|.
T Consensus 84 ~~~~d~li~~ag~ 96 (276)
T PRK05875 84 HGRLHGVVHCAGG 96 (276)
T ss_pred cCCCCEEEECCCc
Confidence 378999998873
No 334
>PRK04266 fibrillarin; Provisional
Probab=94.97 E-value=0.3 Score=42.02 Aligned_cols=99 Identities=14% Similarity=0.096 Sum_probs=58.5
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCceEeCCCCCCchHHHHHHHHhcC
Q 022819 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITDG 262 (291)
Q Consensus 187 ~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~----g~~~~i~~~~~~~~~~~~~~~~~~g 262 (291)
+...++++++||=+|+| .|..+..+++..+..+|++++.+++.++.+.+. .--..+.-+. .+. .....+ ..
T Consensus 66 ~~l~i~~g~~VlD~G~G-~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~--~~~-~~~~~l-~~ 140 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAA-SGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA--RKP-ERYAHV-VE 140 (226)
T ss_pred hhCCCCCCCEEEEEccC-CCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC--CCc-chhhhc-cc
Confidence 44678999999999875 344555666665433899999999876644322 1111221111 110 000011 12
Q ss_pred CccEEEEccCCh----HHHHHHHHhhccCccc
Q 022819 263 GADYSFECIGDT----GMITTALQSCCDVRSI 290 (291)
Q Consensus 263 ~~d~vld~~g~~----~~~~~~~~~l~~~G~i 290 (291)
.+|+++-....+ ..++.+.+.|++||++
T Consensus 141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~l 172 (226)
T PRK04266 141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYL 172 (226)
T ss_pred cCCEEEECCCChhHHHHHHHHHHHhcCCCcEE
Confidence 599998544432 2367888899999986
No 335
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.96 E-value=0.3 Score=43.12 Aligned_cols=79 Identities=18% Similarity=0.301 Sum_probs=50.7
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHHHH-HHcCCceE--eCCCCCCchHHHHHHHHh--c
Q 022819 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRIT--D 261 (291)
Q Consensus 193 ~~~~vlV~G~---g~~G~~~i~~a~~~g~~~vi~~~~~~~---~~~~a-~~~g~~~~--i~~~~~~~~~~~~~~~~~--~ 261 (291)
.++++||.|+ +++|+++++.+...|+ +|+.++++++ +.+.+ ++++.... .|..+ .+.....+.+.. .
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK-PEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4688999986 4899999999988999 8888887742 33322 34453322 34432 233333333332 2
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+.+|+++++.|.
T Consensus 82 g~iDilVnnAG~ 93 (274)
T PRK08415 82 GKIDFIVHSVAF 93 (274)
T ss_pred CCCCEEEECCcc
Confidence 479999999884
No 336
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.94 E-value=0.22 Score=43.49 Aligned_cols=79 Identities=18% Similarity=0.304 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCceE--eCCCCCCchHHHHHHHHhc--
Q 022819 193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF--LNPNDNNEPVQQVIKRITD-- 261 (291)
Q Consensus 193 ~~~~vlV~G~-g--~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~~--i~~~~~~~~~~~~~~~~~~-- 261 (291)
+++++||.|+ + ++|.++++.+...|+ +|+..+++++..+.+ ++.|.... .|..+ ..+..+.+++...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN-PKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC-HHHHHHHHHHHHHHc
Confidence 5688999987 3 799999988888899 888877764222222 23343332 24332 2333333333322
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+.+|+++++.|.
T Consensus 85 g~iDilVnnag~ 96 (260)
T PRK06603 85 GSFDFLLHGMAF 96 (260)
T ss_pred CCccEEEEcccc
Confidence 479999998774
No 337
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.92 E-value=0.45 Score=36.01 Aligned_cols=82 Identities=16% Similarity=0.270 Sum_probs=56.4
Q ss_pred EEEEEcCChHHHHHHHHHHHc--CCCeEE-EEcCChhhHHH-HHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEcc
Q 022819 196 TVVIFGLGTVGLSVAQGAKAR--GASRII-GVDTNPEKCEK-AKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (291)
Q Consensus 196 ~vlV~G~g~~G~~~i~~a~~~--g~~~vi-~~~~~~~~~~~-a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~ 271 (291)
++.|+|.|.+|......++.. +. .++ ++++++++.+. ++++|.. .+ .++.+.+.. ..+|+|+-++
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~------~~~~~ll~~---~~~D~V~I~t 70 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY------TDLEELLAD---EDVDAVIIAT 70 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE------SSHHHHHHH---TTESEEEEES
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch------hHHHHHHHh---hcCCEEEEec
Confidence 578899999999888666655 45 444 55777776665 4567776 33 223333332 2689999999
Q ss_pred CChHHHHHHHHhhccCc
Q 022819 272 GDTGMITTALQSCCDVR 288 (291)
Q Consensus 272 g~~~~~~~~~~~l~~~G 288 (291)
......+.+..+++.|-
T Consensus 71 p~~~h~~~~~~~l~~g~ 87 (120)
T PF01408_consen 71 PPSSHAEIAKKALEAGK 87 (120)
T ss_dssp SGGGHHHHHHHHHHTTS
T ss_pred CCcchHHHHHHHHHcCC
Confidence 98888888888887663
No 338
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.91 E-value=0.18 Score=43.41 Aligned_cols=79 Identities=27% Similarity=0.360 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-H---cCCce-E--eCCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A---FGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~---~g~~~-~--i~~~~~~~~~~~~~~~~~--~g 262 (291)
+++++||.|+ |.+|...++.+...|. +|+.+++++++.+.+. + .+... . .|..+ ..+..+.+.+.. .+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD-EEAINAGIDYAVETFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 3578999987 9999999998888898 8999988887655432 2 23222 2 23332 233333333322 23
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
++|+++.+.+.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 339
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.90 E-value=0.31 Score=41.77 Aligned_cols=80 Identities=23% Similarity=0.270 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCce-EeCCCCC-CchHHHHHHHHhc--CC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-FLNPNDN-NEPVQQVIKRITD--GG 263 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~----~~g~~~-~i~~~~~-~~~~~~~~~~~~~--g~ 263 (291)
+++++||.|+ |.+|..++..+...|. +|+.++++.++.+.+. +.+... ++..+-. .....+.+.+... ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 9999999999999998 8999988877655432 223222 2222211 1233333333322 37
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++.+.|.
T Consensus 81 ~d~vi~~ag~ 90 (250)
T TIGR03206 81 VDVLVNNAGW 90 (250)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 340
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.90 E-value=0.22 Score=43.11 Aligned_cols=80 Identities=21% Similarity=0.312 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHHcCCce-EeCCCCC-CchHHHHHHHHh--cCCcc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTE-FLNPNDN-NEPVQQVIKRIT--DGGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~--~~~~a~~~g~~~-~i~~~~~-~~~~~~~~~~~~--~g~~d 265 (291)
+++++||.|+ |++|.++++.+...|+ +|+.+++++. ..+.+++.+... .+..+-. .++....+.+.. .+.+|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999987 8999999999999999 8888765432 223333444322 2222211 233333333322 23789
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999875
No 341
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=94.88 E-value=0.27 Score=42.93 Aligned_cols=90 Identities=21% Similarity=0.227 Sum_probs=58.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCc---eEeCCCCCCchHHHHHHHHhcCCc
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVT---EFLNPNDNNEPVQQVIKRITDGGA 264 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~----g~~---~~i~~~~~~~~~~~~~~~~~~g~~ 264 (291)
.++.+||-+|+| .|..+..+++. |. +|++++.+++.++.+++. |.. .++.. +.. .+.....+.+
T Consensus 43 ~~~~~vLDiGcG-~G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-----d~~-~l~~~~~~~f 113 (255)
T PRK11036 43 PRPLRVLDAGGG-EGQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-----AAQ-DIAQHLETPV 113 (255)
T ss_pred CCCCEEEEeCCC-chHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-----CHH-HHhhhcCCCC
Confidence 456788888886 56677777764 77 999999999988887653 321 12211 111 1222233479
Q ss_pred cEEEEcc-----CC-hHHHHHHHHhhccCccc
Q 022819 265 DYSFECI-----GD-TGMITTALQSCCDVRSI 290 (291)
Q Consensus 265 d~vld~~-----g~-~~~~~~~~~~l~~~G~i 290 (291)
|+|+-.. .. ...+..+.+.|++||++
T Consensus 114 D~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l 145 (255)
T PRK11036 114 DLILFHAVLEWVADPKSVLQTLWSVLRPGGAL 145 (255)
T ss_pred CEEEehhHHHhhCCHHHHHHHHHHHcCCCeEE
Confidence 9888432 22 35688999999999986
No 342
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=94.86 E-value=0.44 Score=42.11 Aligned_cols=35 Identities=23% Similarity=0.407 Sum_probs=30.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
.+.+|+|+|+|++|..++..+-..|..++..+|.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45679999999999999999999998788888754
No 343
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=94.85 E-value=0.19 Score=49.63 Aligned_cols=77 Identities=13% Similarity=0.227 Sum_probs=58.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCCh
Q 022819 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (291)
Q Consensus 195 ~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~~ 274 (291)
+.|+|.|.|.+|..+++.++..|. .++++|.++++.+.+++.|...++- + ..-.+.+++..-..+|.++-+++..
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-D---at~~~~L~~agi~~A~~vv~~~~d~ 475 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYG-D---ATQLELLRAAGAEKAEAIVITCNEP 475 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEe-e---CCCHHHHHhcCCccCCEEEEEeCCH
Confidence 578899999999999999999999 8999999999999999988654431 1 1222344444333789999888885
Q ss_pred HH
Q 022819 275 GM 276 (291)
Q Consensus 275 ~~ 276 (291)
..
T Consensus 476 ~~ 477 (601)
T PRK03659 476 ED 477 (601)
T ss_pred HH
Confidence 43
No 344
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.83 E-value=0.22 Score=42.93 Aligned_cols=76 Identities=14% Similarity=0.295 Sum_probs=50.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCce-E--eCCCCCCchHHHHHHHHhc--CCccEEE
Q 022819 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-F--LNPNDNNEPVQQVIKRITD--GGADYSF 268 (291)
Q Consensus 196 ~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~g~~~-~--i~~~~~~~~~~~~~~~~~~--g~~d~vl 268 (291)
+++|.|+ |.+|...+..+...|+ +|+++++++++.+.+.. ++... . .|..+ ..++.+.+.+... +++|+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 5888887 9999999999999999 89999998887665533 34322 2 23322 1233333333322 3789999
Q ss_pred EccCC
Q 022819 269 ECIGD 273 (291)
Q Consensus 269 d~~g~ 273 (291)
.+.|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98774
No 345
>PRK06720 hypothetical protein; Provisional
Probab=94.80 E-value=0.42 Score=39.14 Aligned_cols=80 Identities=21% Similarity=0.246 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-H---HcCCce-EeCCCCC-CchHHHHHHHHh--cCC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-K---AFGVTE-FLNPNDN-NEPVQQVIKRIT--DGG 263 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~---~~g~~~-~i~~~~~-~~~~~~~~~~~~--~g~ 263 (291)
++++++|.|+ +++|...+..+...|+ +|+.+++++++.+.+ + +.+... .+..+-. ..++.+.+.+.. .++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5678999987 7899999998888898 899998877655332 2 234322 2222211 123333332221 247
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++.+.|.
T Consensus 94 iDilVnnAG~ 103 (169)
T PRK06720 94 IDMLFQNAGL 103 (169)
T ss_pred CCEEEECCCc
Confidence 9999999875
No 346
>CHL00194 ycf39 Ycf39; Provisional
Probab=94.77 E-value=0.19 Score=45.37 Aligned_cols=71 Identities=15% Similarity=0.225 Sum_probs=48.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEe-CCCCCCchHHHHHHHHhcCCccEEEEccCC
Q 022819 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (291)
Q Consensus 196 ~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i-~~~~~~~~~~~~~~~~~~g~~d~vld~~g~ 273 (291)
+|+|+|+ |.+|..++..+...|. +|+++.++.++...+...++..+. |..+ .+ .+.+... ++|+||.+++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d--~~---~l~~al~-g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL--PE---TLPPSFK-GVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC--HH---HHHHHHC-CCCEEEECCCC
Confidence 6899987 9999999999999998 899998887665554445554332 3222 21 2333222 58999998663
No 347
>PRK06398 aldose dehydrogenase; Validated
Probab=94.75 E-value=0.14 Score=44.66 Aligned_cols=74 Identities=20% Similarity=0.267 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCce-EeCCCCCCchHHHHHHHHh--cCCccEEE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~-~i~~~~~~~~~~~~~~~~~--~g~~d~vl 268 (291)
+++++||+|+ +++|.+++..+...|+ +|+.+++++++.. .... ..|..+ ..+..+.+.+.. .+.+|+++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN-KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4678999987 8999999999999999 8998887765432 1111 224332 133333333332 24789999
Q ss_pred EccCC
Q 022819 269 ECIGD 273 (291)
Q Consensus 269 d~~g~ 273 (291)
.+.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98874
No 348
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=94.74 E-value=0.27 Score=43.89 Aligned_cols=79 Identities=23% Similarity=0.289 Sum_probs=56.2
Q ss_pred CCCCEEEEEcC-ChHHHHHH-HHHHHcCCCeEEEEcCChhhHHHHHH-----cCCce---EeCCCCCCchHHHHHHHHhc
Q 022819 192 SKGSTVVIFGL-GTVGLSVA-QGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE---FLNPNDNNEPVQQVIKRITD 261 (291)
Q Consensus 192 ~~~~~vlV~G~-g~~G~~~i-~~a~~~g~~~vi~~~~~~~~~~~a~~-----~g~~~---~i~~~~~~~~~~~~~~~~~~ 261 (291)
+-|++.+|.|+ .++|.+.+ ++|+ .|. +|+.+.|+++|++..++ .++.. .+|+...+. .-+.+++.+.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence 34688999998 68998766 5555 999 89999999999886643 44321 457765333 3455565555
Q ss_pred C-CccEEEEccCC
Q 022819 262 G-GADYSFECIGD 273 (291)
Q Consensus 262 g-~~d~vld~~g~ 273 (291)
+ .+-+.++++|-
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 5 78899999995
No 349
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.74 E-value=0.35 Score=41.42 Aligned_cols=76 Identities=17% Similarity=0.255 Sum_probs=48.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc----CCc-eEe--CCCCCCchHHHHHHHHhcCCcc
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF----GVT-EFL--NPNDNNEPVQQVIKRITDGGAD 265 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~~----g~~-~~i--~~~~~~~~~~~~~~~~~~g~~d 265 (291)
++++|.|+ |++|..+++.+...|. +|+++++++++.+.+. ++ +.. .++ |..+ ..+..+.+.+. ...+|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~-~~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILD-TASHAAFLDSL-PALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC-hHHHHHHHHHH-hhcCC
Confidence 57899987 9999999999999998 8999999887654332 11 111 122 3222 12333333332 22579
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 79 ~vv~~ag~ 86 (243)
T PRK07102 79 IVLIAVGT 86 (243)
T ss_pred EEEECCcC
Confidence 99987764
No 350
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=94.74 E-value=0.31 Score=43.38 Aligned_cols=94 Identities=15% Similarity=0.121 Sum_probs=63.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCceEe--CCCC--CCchHHHHHHHHhcCCccEE-E
Q 022819 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTEFL--NPND--NNEPVQQVIKRITDGGADYS-F 268 (291)
Q Consensus 195 ~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~-g~~~~i--~~~~--~~~~~~~~~~~~~~g~~d~v-l 268 (291)
++|||+|.| -|-.+-.+++....+++++++-+++=.++++++ +..... |.+- .-.|-.+.+++... .+|+| +
T Consensus 78 k~VLiiGgG-dG~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGG-DGGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCC-ccHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 599999765 455566778888788999999999999999874 221111 1110 01455566666433 79954 5
Q ss_pred EccCC---------hHHHHHHHHhhccCccc
Q 022819 269 ECIGD---------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 269 d~~g~---------~~~~~~~~~~l~~~G~i 290 (291)
|++.. ++.++.+.+.|+++|.+
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~ 186 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKEDGIF 186 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCCcEE
Confidence 55554 67889999999999865
No 351
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.73 E-value=0.18 Score=46.80 Aligned_cols=35 Identities=26% Similarity=0.310 Sum_probs=31.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
.+.+|+|+|+|++|..++..+...|..++..+|.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 55679999999999999999999999899999876
No 352
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.72 E-value=0.18 Score=42.80 Aligned_cols=73 Identities=19% Similarity=0.240 Sum_probs=48.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCc-eEeCCCCCCchHHHHHHHHhcC-CccEEEEc
Q 022819 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDG-GADYSFEC 270 (291)
Q Consensus 194 ~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~-~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~ 270 (291)
+++++|.|+ |.+|..+++.+...|. +|+.+.++.++. .... ...|..+ .....+.+.+.... ++|+++.+
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPGELFACDLAD-IEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEEEEC
Confidence 578999987 9999999999999998 899998876541 1111 1223322 13333334443333 68999998
Q ss_pred cCC
Q 022819 271 IGD 273 (291)
Q Consensus 271 ~g~ 273 (291)
.|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 874
No 353
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.72 E-value=0.31 Score=41.94 Aligned_cols=82 Identities=23% Similarity=0.276 Sum_probs=52.6
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce--E--eCCCC-CCchHHHHHHHHh
Q 022819 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE--F--LNPND-NNEPVQQVIKRIT 260 (291)
Q Consensus 191 ~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~--~--i~~~~-~~~~~~~~~~~~~ 260 (291)
..++++++|.|+ |.+|...++.+...|+ +|+.++++.++.+.+ ++.+... + .|.+. ...++.+.+..+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 457889999987 9999999988888899 899999887664333 2333221 1 23321 1233333333332
Q ss_pred c--CCccEEEEccCC
Q 022819 261 D--GGADYSFECIGD 273 (291)
Q Consensus 261 ~--g~~d~vld~~g~ 273 (291)
. +.+|+++.+.+.
T Consensus 88 ~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 88 EQFGRLDGVLHNAGL 102 (247)
T ss_pred HHhCCCCEEEECCcc
Confidence 2 378999988764
No 354
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.71 E-value=0.31 Score=41.95 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=29.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 022819 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226 (291)
Q Consensus 194 ~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~ 226 (291)
..+|+|+|+|++|..++..+..+|..+++.+|.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~ 53 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDD 53 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 568999999999999999999999988888854
No 355
>PRK04457 spermidine synthase; Provisional
Probab=94.71 E-value=0.3 Score=43.05 Aligned_cols=92 Identities=12% Similarity=0.113 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCc----e--EeCCCCCCchHHHHHHHHhcCCc
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVT----E--FLNPNDNNEPVQQVIKRITDGGA 264 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~-g~~----~--~i~~~~~~~~~~~~~~~~~~g~~ 264 (291)
.++++||++|+| .|..+..+++.....++++++.+++-.+.+++. +.. . ++. .+..+.+.+. .+.+
T Consensus 65 ~~~~~vL~IG~G-~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~-----~Da~~~l~~~-~~~y 137 (262)
T PRK04457 65 PRPQHILQIGLG-GGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE-----ADGAEYIAVH-RHST 137 (262)
T ss_pred CCCCEEEEECCC-HhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE-----CCHHHHHHhC-CCCC
Confidence 456789999886 377777777776444899999999999998874 321 1 121 2344444432 2378
Q ss_pred cEEE-EccCC---------hHHHHHHHHhhccCccc
Q 022819 265 DYSF-ECIGD---------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 265 d~vl-d~~g~---------~~~~~~~~~~l~~~G~i 290 (291)
|+|+ |.... .+.++.+.+.|+++|.+
T Consensus 138 D~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvl 173 (262)
T PRK04457 138 DVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIF 173 (262)
T ss_pred CEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEE
Confidence 9766 33221 47789999999999986
No 356
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.71 E-value=0.31 Score=43.22 Aligned_cols=80 Identities=23% Similarity=0.262 Sum_probs=49.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh---------hhHH-HHH---HcCCce-E--eCCCCCCchHHH
Q 022819 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP---------EKCE-KAK---AFGVTE-F--LNPNDNNEPVQQ 254 (291)
Q Consensus 192 ~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~---------~~~~-~a~---~~g~~~-~--i~~~~~~~~~~~ 254 (291)
-+++++||.|+ +++|.++++.+...|+ +|+.++++. ++.+ .++ +.+... . .|..+ .++..+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD-WDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC-HHHHHH
Confidence 46789999987 8999999998888999 888876653 3322 222 223322 2 23322 233333
Q ss_pred HHHHHh--cCCccEEEEccCC
Q 022819 255 VIKRIT--DGGADYSFECIGD 273 (291)
Q Consensus 255 ~~~~~~--~g~~d~vld~~g~ 273 (291)
.+++.. .+.+|+++.+.|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 343332 2479999998875
No 357
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=94.70 E-value=0.25 Score=40.54 Aligned_cols=39 Identities=23% Similarity=0.270 Sum_probs=32.1
Q ss_pred CCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhh
Q 022819 191 ISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEK 230 (291)
Q Consensus 191 ~~~~~~vlV~G~g~-~G~~~i~~a~~~g~~~vi~~~~~~~~ 230 (291)
--.+++|+|+|+|. +|..++..++..|+ +|..+.++.++
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~~ 80 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTKN 80 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCchh
Confidence 35789999999986 59989999999999 78888776543
No 358
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.70 E-value=0.29 Score=41.79 Aligned_cols=79 Identities=24% Similarity=0.287 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCce-Ee--CCCCCCchHHHHHHHHh--cCCcc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g~~d 265 (291)
++.++||.|+ |.+|..++..+...|. .|+..+++.++++.+ ..++... .+ |..+ .+.+.+.+.+.. .+++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD-RDEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4678999987 9999999999888998 888887877766544 3333222 22 3222 123333333322 14789
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999884
No 359
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.70 E-value=0.053 Score=51.45 Aligned_cols=59 Identities=8% Similarity=0.112 Sum_probs=42.2
Q ss_pred hhcCCCCCCEEE----EEc-CChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCc-eEeCCC
Q 022819 187 NVADISKGSTVV----IFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPN 246 (291)
Q Consensus 187 ~~~~~~~~~~vl----V~G-~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~-~~i~~~ 246 (291)
...++++++.+| |+| +|++|.+++|+++.+|+ .|+++...+++....+..+.. .+.|.+
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~ 91 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDAT 91 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECC
Confidence 456678888877 775 49999999999999999 888887666644444444444 245444
No 360
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.70 E-value=0.22 Score=42.66 Aligned_cols=97 Identities=13% Similarity=0.081 Sum_probs=59.0
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCceEeC-------CCCCCch-HHHHHHHH-
Q 022819 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLN-------PNDNNEP-VQQVIKRI- 259 (291)
Q Consensus 190 ~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~~~~i~-------~~~~~~~-~~~~~~~~- 259 (291)
...++.+||+.|+| .|.-++-+|. .|+ .|++++.+++-++.+ ++.+...... +.....+ +...+.++
T Consensus 34 ~~~~~~rvL~~gCG-~G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~ 110 (218)
T PRK13255 34 ALPAGSRVLVPLCG-KSLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT 110 (218)
T ss_pred CCCCCCeEEEeCCC-ChHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence 44567899999987 6777777775 799 999999999887765 3333221100 0000000 00001111
Q ss_pred --hcCCccEEEEccC--------ChHHHHHHHHhhccCcc
Q 022819 260 --TDGGADYSFECIG--------DTGMITTALQSCCDVRS 289 (291)
Q Consensus 260 --~~g~~d~vld~~g--------~~~~~~~~~~~l~~~G~ 289 (291)
..+.||.|+|..- .+..++.+.++|++||+
T Consensus 111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~ 150 (218)
T PRK13255 111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCR 150 (218)
T ss_pred cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCe
Confidence 1136899998653 14568888999999986
No 361
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.69 E-value=0.33 Score=41.93 Aligned_cols=79 Identities=28% Similarity=0.357 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HH---cCCce-Ee--CCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA---FGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~---~g~~~-~i--~~~~~~~~~~~~~~~~~--~g 262 (291)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++ .+... .+ |..+ ..++...+.+.. .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhcC
Confidence 4678999987 8999999999998999 899999887765433 22 23222 22 3322 123333333322 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 78999999874
No 362
>PRK06484 short chain dehydrogenase; Validated
Probab=94.68 E-value=0.21 Score=48.19 Aligned_cols=79 Identities=18% Similarity=0.339 Sum_probs=54.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCce---EeCCCCCCchHHHHHHHHh--cCCcc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE---FLNPNDNNEPVQQVIKRIT--DGGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g~~~---~i~~~~~~~~~~~~~~~~~--~g~~d 265 (291)
+++++||+|+ +++|.++++.+...|+ +|+.++++.++++.+ ++++... ..|..+ .+++.+.+.+.. .+.+|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 5788999987 8999999999999999 999998888876544 4455432 234332 233434443332 24799
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99998874
No 363
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.66 E-value=0.37 Score=42.43 Aligned_cols=80 Identities=19% Similarity=0.310 Sum_probs=49.8
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHH-HHcCCceEe--CCCCCCchHHHHHHHHh--
Q 022819 192 SKGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP---EKCEKA-KAFGVTEFL--NPNDNNEPVQQVIKRIT-- 260 (291)
Q Consensus 192 ~~~~~vlV~G~---g~~G~~~i~~a~~~g~~~vi~~~~~~---~~~~~a-~~~g~~~~i--~~~~~~~~~~~~~~~~~-- 260 (291)
-.++++||.|+ +++|++++..+...|+ +|+.+.+++ ++.+.+ ++++....+ |..+ ..+..+.+.+..
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD-EASIDAVFETLEKK 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC-HHHHHHHHHHHHHh
Confidence 35688999986 5899999999999999 888776653 333322 344532222 3322 233333333332
Q ss_pred cCCccEEEEccCC
Q 022819 261 DGGADYSFECIGD 273 (291)
Q Consensus 261 ~g~~d~vld~~g~ 273 (291)
.+.+|+++.+.|.
T Consensus 86 ~g~iD~lv~nAG~ 98 (272)
T PRK08159 86 WGKLDFVVHAIGF 98 (272)
T ss_pred cCCCcEEEECCcc
Confidence 2478999999874
No 364
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.65 E-value=0.46 Score=37.13 Aligned_cols=92 Identities=14% Similarity=0.281 Sum_probs=56.5
Q ss_pred EEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCCh--hh-HHHHHHcCCceEeCCCCCC-chHH----------------
Q 022819 197 VVIFGL-GTVGLSVAQGAKARG--ASRIIGVDTNP--EK-CEKAKAFGVTEFLNPNDNN-EPVQ---------------- 253 (291)
Q Consensus 197 vlV~G~-g~~G~~~i~~a~~~g--~~~vi~~~~~~--~~-~~~a~~~g~~~~i~~~~~~-~~~~---------------- 253 (291)
|.|+|+ |.+|..++.+.+... + +|+++.... ++ .+.++++....+...++.. ..+.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 568898 999999999999887 5 677664433 22 3455678877766554210 1111
Q ss_pred HHHHHHhc-CCccEEEEccCChHHHHHHHHhhccCcc
Q 022819 254 QVIKRITD-GGADYSFECIGDTGMITTALQSCCDVRS 289 (291)
Q Consensus 254 ~~~~~~~~-g~~d~vld~~g~~~~~~~~~~~l~~~G~ 289 (291)
+.+.++.. ..+|+|+..+.+...+.-.+..++.+-+
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ 116 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKD 116 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSE
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCe
Confidence 11223333 3789999988887777777887776644
No 365
>PRK08328 hypothetical protein; Provisional
Probab=94.64 E-value=0.2 Score=43.31 Aligned_cols=35 Identities=34% Similarity=0.510 Sum_probs=30.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
.+.+|+|+|+|++|..++..+...|..++..+|.+
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 34679999999999999999999999888888743
No 366
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.63 E-value=0.16 Score=45.09 Aligned_cols=80 Identities=25% Similarity=0.385 Sum_probs=52.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-Ee----CCCCCCchHHHHHHHH--
Q 022819 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL----NPNDNNEPVQQVIKRI-- 259 (291)
Q Consensus 192 ~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~i----~~~~~~~~~~~~~~~~-- 259 (291)
..+++|+|.|+ +++|.+.+.-.-.+|+ .++.+.+...+++.. ++.+... ++ |..+ .++..+.+.+.
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~-~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD-EESVKKFVEWAIR 87 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC-HHHHHHHHHHHHH
Confidence 46789999998 8999988888888899 666666777666555 4444443 22 2221 23444444332
Q ss_pred hcCCccEEEEccCC
Q 022819 260 TDGGADYSFECIGD 273 (291)
Q Consensus 260 ~~g~~d~vld~~g~ 273 (291)
..|++|+.+++.|-
T Consensus 88 ~fg~vDvLVNNAG~ 101 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGI 101 (282)
T ss_pred hcCCCCEEEecCcc
Confidence 23589999998875
No 367
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.61 E-value=0.051 Score=47.40 Aligned_cols=101 Identities=21% Similarity=0.208 Sum_probs=62.1
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCce-E-eCCCCC-CchHHHHH
Q 022819 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTE-F-LNPNDN-NEPVQQVI 256 (291)
Q Consensus 185 l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~----~g~~~-~-i~~~~~-~~~~~~~~ 256 (291)
+....++.+|++|+=.|.| .|.++..+++..|. .+|+..+.++++.+.|++ .|... + +...+- .+.+
T Consensus 32 I~~~l~i~pG~~VlEaGtG-SG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~---- 106 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTG-SGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGF---- 106 (247)
T ss_dssp HHHHTT--TT-EEEEE--T-TSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG------
T ss_pred HHHHcCCCCCCEEEEecCC-cHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccc----
Confidence 4567889999999888754 45666677776652 389999999999887754 55543 1 211110 1112
Q ss_pred HHHhcCCcc-EEEEccCChHHHHHHHHhh-ccCccc
Q 022819 257 KRITDGGAD-YSFECIGDTGMITTALQSC-CDVRSI 290 (291)
Q Consensus 257 ~~~~~g~~d-~vld~~g~~~~~~~~~~~l-~~~G~i 290 (291)
.+.....+| +++|--.....+..+.+.| ++||+|
T Consensus 107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i 142 (247)
T PF08704_consen 107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRI 142 (247)
T ss_dssp STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEE
T ss_pred cccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceE
Confidence 111123677 6677777778899999999 889876
No 368
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=94.58 E-value=0.4 Score=39.71 Aligned_cols=95 Identities=17% Similarity=0.203 Sum_probs=60.3
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCce--EeCCCCCCchHHHHHHHH
Q 022819 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRI 259 (291)
Q Consensus 186 ~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~--~i~~~~~~~~~~~~~~~~ 259 (291)
.....+.++++||-+|+| .|..++.+++.....++++++.+++.++.+++ .+... ++..+ ... .
T Consensus 24 ~~~l~~~~~~~vLDiG~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d-----~~~----~ 93 (187)
T PRK08287 24 LSKLELHRAKHLIDVGAG-TGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGE-----API----E 93 (187)
T ss_pred HHhcCCCCCCEEEEECCc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecC-----chh----h
Confidence 345566788999999875 36666666666532389999999988777754 33322 22211 101 1
Q ss_pred hcCCccEEEEccC---ChHHHHHHHHhhccCccc
Q 022819 260 TDGGADYSFECIG---DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 260 ~~g~~d~vld~~g---~~~~~~~~~~~l~~~G~i 290 (291)
..+.+|+|+.... -...+..+.+.|+++|++
T Consensus 94 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~l 127 (187)
T PRK08287 94 LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRL 127 (187)
T ss_pred cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEE
Confidence 1236898885432 134678889999999976
No 369
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.58 E-value=0.27 Score=42.59 Aligned_cols=78 Identities=21% Similarity=0.273 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g 262 (291)
.++++||.|+ |++|...++.+...|+ +|+.+.++ ++.+.+ .+.+... . .|..+ .......+.+.. .+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFG 90 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 5689999987 8999999999999999 88888776 332222 2233322 2 23332 122333333322 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 91 ~id~li~~ag~ 101 (258)
T PRK06935 91 KIDILVNNAGT 101 (258)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 370
>PRK06484 short chain dehydrogenase; Validated
Probab=94.56 E-value=0.31 Score=46.98 Aligned_cols=79 Identities=24% Similarity=0.283 Sum_probs=54.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCce---EeCCCCCCchHHHHHHHHh--cCCcc
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE---FLNPNDNNEPVQQVIKRIT--DGGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~g~~~---~i~~~~~~~~~~~~~~~~~--~g~~d 265 (291)
.++++||.|+ +++|+.+++.+...|+ +|+.+++++++.+.+.+ ++... ..|..+ .++....+.+.. .+.+|
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRLD 345 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5788999987 8999999999999999 99999998887766543 44332 223332 233333333332 24799
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 346 ~li~nAg~ 353 (520)
T PRK06484 346 VLVNNAGI 353 (520)
T ss_pred EEEECCCC
Confidence 99998875
No 371
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.55 E-value=0.29 Score=42.99 Aligned_cols=78 Identities=18% Similarity=0.220 Sum_probs=50.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCc-eEe--CCCCCCchHHHHHHHHh--cCCccE
Q 022819 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT-EFL--NPNDNNEPVQQVIKRIT--DGGADY 266 (291)
Q Consensus 194 ~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~g~~-~~i--~~~~~~~~~~~~~~~~~--~g~~d~ 266 (291)
++++||.|+ |.+|..+++.+...|. +|+.++++.++++.+.+ ++.. ..+ |..+ ..++...+.+.. .+++|+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 468999987 9999999998888898 89999888877665443 2221 122 3221 123333333321 247899
Q ss_pred EEEccCC
Q 022819 267 SFECIGD 273 (291)
Q Consensus 267 vld~~g~ 273 (291)
++.+.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999885
No 372
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.55 E-value=0.24 Score=47.51 Aligned_cols=71 Identities=28% Similarity=0.359 Sum_probs=49.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-----hHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEE
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-----KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYS 267 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~-----~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~v 267 (291)
.+++|+|+|+|.+|+.++.+++.+|. .|.+++.++. ..+.+++.|+........ . ....+|.|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~--~---------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP--T---------LPEDTDLV 82 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc--c---------ccCCCCEE
Confidence 56789999999999999999999999 8888875542 234456677765543321 1 01257888
Q ss_pred EEccCChH
Q 022819 268 FECIGDTG 275 (291)
Q Consensus 268 ld~~g~~~ 275 (291)
+.+.|.++
T Consensus 83 v~s~Gi~~ 90 (480)
T PRK01438 83 VTSPGWRP 90 (480)
T ss_pred EECCCcCC
Confidence 88887643
No 373
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.55 E-value=0.32 Score=40.95 Aligned_cols=35 Identities=17% Similarity=0.402 Sum_probs=30.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
.+.+|+|+|+|++|.-++..+-..|..++..+|..
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 35679999999999999999999999888888754
No 374
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.53 E-value=0.3 Score=41.75 Aligned_cols=71 Identities=17% Similarity=0.325 Sum_probs=48.6
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCC
Q 022819 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (291)
Q Consensus 197 vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~--~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~ 273 (291)
|+|+|+ |.+|..+++.+...+. +|.++.++.. ..+.++..|+..+ ..+. .+ .+.+.+.. .++|.||-+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~--~~-~~~l~~al-~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADY--DD-PESLVAAL-KGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-T--T--HHHHHHHH-TTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-eccc--CC-HHHHHHHH-cCCceEEeecCc
Confidence 688987 9999999999999888 7888877753 3555677888654 2221 11 22333322 279999998883
No 375
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=94.52 E-value=0.48 Score=43.93 Aligned_cols=94 Identities=15% Similarity=0.241 Sum_probs=59.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEc--CChhh-HHHHHHcCCceEeCCCCCC-chHH--------------
Q 022819 195 STVVIFGL-GTVGLSVAQGAKAR--GASRIIGVD--TNPEK-CEKAKAFGVTEFLNPNDNN-EPVQ-------------- 253 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~--g~~~vi~~~--~~~~~-~~~a~~~g~~~~i~~~~~~-~~~~-------------- 253 (291)
++|.|+|+ |.+|..++.+.+.. .+ +|+++. ++.++ .+.+++++...+...++.. ..+.
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 57899996 99999999988765 45 677774 44444 3455678877765443200 1111
Q ss_pred HHHHHHhcC-CccEEEEccCChHHHHHHHHhhccCcc
Q 022819 254 QVIKRITDG-GADYSFECIGDTGMITTALQSCCDVRS 289 (291)
Q Consensus 254 ~~~~~~~~g-~~d~vld~~g~~~~~~~~~~~l~~~G~ 289 (291)
+.+.++... .+|+|+..+++...+.-.+..++.|-+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~ 117 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKR 117 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCc
Confidence 112222222 689999999986667777787776644
No 376
>PRK06940 short chain dehydrogenase; Provisional
Probab=94.50 E-value=0.37 Score=42.43 Aligned_cols=77 Identities=23% Similarity=0.321 Sum_probs=48.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HH---cCCce-E--eCCCCCCchHHHHHHHHh-cCCcc
Q 022819 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA---FGVTE-F--LNPNDNNEPVQQVIKRIT-DGGAD 265 (291)
Q Consensus 194 ~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~---~g~~~-~--i~~~~~~~~~~~~~~~~~-~g~~d 265 (291)
+++++|.|+|++|..++..+. .|. +|+.+++++++++.+ ++ .+... . .|..+ .++....+.+.. .+++|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCC
Confidence 357888898999999998875 788 899998887765433 22 23322 2 23332 233333333321 24799
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 79 ~li~nAG~ 86 (275)
T PRK06940 79 GLVHTAGV 86 (275)
T ss_pred EEEECCCc
Confidence 99999885
No 377
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.49 E-value=0.085 Score=44.72 Aligned_cols=95 Identities=15% Similarity=0.122 Sum_probs=61.2
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCce--EeCCCCCCchHHHHHHHH
Q 022819 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRI 259 (291)
Q Consensus 186 ~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~--~i~~~~~~~~~~~~~~~~ 259 (291)
.+..+++++++||-+|+| .|..+..+++.. . ++++++.+++..+.+++ .+... ++..+. ... +.
T Consensus 71 ~~~l~~~~~~~VLeiG~G-sG~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~----~~-- 140 (212)
T PRK00312 71 TELLELKPGDRVLEIGTG-SGYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDG-WKG----WP-- 140 (212)
T ss_pred HHhcCCCCCCEEEEECCC-ccHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCc-ccC----CC--
Confidence 456678899999999886 355555566653 3 89999999887766653 34332 221111 011 00
Q ss_pred hcCCccEEEEccCChHHHHHHHHhhccCccc
Q 022819 260 TDGGADYSFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 260 ~~g~~d~vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
..+.+|.|+-............+.|++||++
T Consensus 141 ~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~l 171 (212)
T PRK00312 141 AYAPFDRILVTAAAPEIPRALLEQLKEGGIL 171 (212)
T ss_pred cCCCcCEEEEccCchhhhHHHHHhcCCCcEE
Confidence 1147998887655556678888999999986
No 378
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.49 E-value=0.29 Score=37.86 Aligned_cols=33 Identities=30% Similarity=0.451 Sum_probs=25.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCCh
Q 022819 196 TVVIFGL-GTVGLSVAQGAKA-RGASRIIGVDTNP 228 (291)
Q Consensus 196 ~vlV~G~-g~~G~~~i~~a~~-~g~~~vi~~~~~~ 228 (291)
+|+|+|+ |-+|..+++.+.. .+.+-+-++++++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKP 36 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTT
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCC
Confidence 5889999 9999999999998 5774455555554
No 379
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=94.48 E-value=0.43 Score=38.64 Aligned_cols=79 Identities=20% Similarity=0.331 Sum_probs=48.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g 272 (291)
++.+|+|+|+|.+|.--++.+...|+ .|.+++ ++..+.+++++.... +.+ .+ .+..-.++|+|+-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~----~~----~~~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQK----TF----SNDDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-Eec----cc----ChhcCCCceEEEECCC
Confidence 57889999999999999998888999 777773 333344444542111 111 11 1111126899999888
Q ss_pred ChHHHHHHHHhh
Q 022819 273 DTGMITTALQSC 284 (291)
Q Consensus 273 ~~~~~~~~~~~l 284 (291)
..+ .+..+..+
T Consensus 80 d~e-~N~~i~~~ 90 (157)
T PRK06719 80 QHA-VNMMVKQA 90 (157)
T ss_pred CHH-HHHHHHHH
Confidence 854 44444433
No 380
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=94.48 E-value=0.32 Score=42.95 Aligned_cols=42 Identities=21% Similarity=0.242 Sum_probs=35.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a 234 (291)
.++++++|+|+|++|.+++..+...|+ +|+++.+++++.+.+
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~l 156 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEEL 156 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 457889999999999999988888898 888888887775433
No 381
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.43 E-value=0.32 Score=43.78 Aligned_cols=78 Identities=24% Similarity=0.299 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----------hhHH----HHHHcCCce-Ee--CCCCCCchHHH
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----------EKCE----KAKAFGVTE-FL--NPNDNNEPVQQ 254 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~----------~~~~----~a~~~g~~~-~i--~~~~~~~~~~~ 254 (291)
+++++||.|+ +++|+++++.+...|+ +|+.++++. ++.+ .++..|... .+ |..+ ..+...
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 84 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLV-PEQVRA 84 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCC-HHHHHH
Confidence 4688999987 8999999999999999 888887763 2322 223334322 22 3322 233333
Q ss_pred HHHHHhc--CCccEEEEcc-C
Q 022819 255 VIKRITD--GGADYSFECI-G 272 (291)
Q Consensus 255 ~~~~~~~--g~~d~vld~~-g 272 (291)
.+.+... +.+|+++++. |
T Consensus 85 ~~~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 85 LVERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHHHcCCccEEEECCcc
Confidence 3333322 4789999988 5
No 382
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.43 E-value=0.27 Score=46.46 Aligned_cols=99 Identities=8% Similarity=0.051 Sum_probs=60.5
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCce-E--eCCCCCCchHHHHHHH
Q 022819 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKR 258 (291)
Q Consensus 186 ~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~----~~g~~~-~--i~~~~~~~~~~~~~~~ 258 (291)
.....++++++||-+|+| -|..++++++.++..+|++++.++++++.++ ++|... + ++.+. ......
T Consensus 231 ~~~L~~~~g~~VLDlcag-~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~--~~~~~~--- 304 (426)
T TIGR00563 231 ATWLAPQNEETILDACAA-PGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG--RGPSQW--- 304 (426)
T ss_pred HHHhCCCCCCeEEEeCCC-ccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc--cccccc---
Confidence 344567889999998765 2444445566554339999999999987664 356542 2 22111 111000
Q ss_pred HhcCCccEEEE---ccCC-------------------------hHHHHHHHHhhccCccc
Q 022819 259 ITDGGADYSFE---CIGD-------------------------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 259 ~~~g~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~i 290 (291)
...+.||.||- |+|. ...+..+++.|++||++
T Consensus 305 ~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~l 364 (426)
T TIGR00563 305 AENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTL 364 (426)
T ss_pred ccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 01236998763 4442 24678889999999986
No 383
>PRK00536 speE spermidine synthase; Provisional
Probab=94.42 E-value=0.12 Score=45.54 Aligned_cols=96 Identities=11% Similarity=-0.142 Sum_probs=60.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccE-EEEc
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADY-SFEC 270 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~-vld~ 270 (291)
...++|||+|+| =|.++-.++|.- ++|..++-+++-.+.++++=....-..++-+-.+...+.+...+.+|+ ++|+
T Consensus 71 ~~pk~VLIiGGG-DGg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs 147 (262)
T PRK00536 71 KELKEVLIVDGF-DLELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ 147 (262)
T ss_pred CCCCeEEEEcCC-chHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence 556899999764 244555777765 389999999999999888311100001111111112233333347995 5666
Q ss_pred cCChHHHHHHHHhhccCccc
Q 022819 271 IGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 271 ~g~~~~~~~~~~~l~~~G~i 290 (291)
+-.++..+.+.+.|+++|.+
T Consensus 148 ~~~~~fy~~~~~~L~~~Gi~ 167 (262)
T PRK00536 148 EPDIHKIDGLKRMLKEDGVF 167 (262)
T ss_pred CCChHHHHHHHHhcCCCcEE
Confidence 77778889999999999975
No 384
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.42 E-value=0.2 Score=44.07 Aligned_cols=97 Identities=16% Similarity=0.183 Sum_probs=63.3
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCc--e--EeCCCCCCchHHHHHHHHh
Q 022819 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT--E--FLNPNDNNEPVQQVIKRIT 260 (291)
Q Consensus 185 l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~--~--~i~~~~~~~~~~~~~~~~~ 260 (291)
+....++.++.+||-+|+| .|..+..+++..++ ++++++.+++..+.+++.... . ++.. ++.. ..+.
T Consensus 44 ~l~~l~l~~~~~VLDiGcG-~G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-----D~~~--~~~~ 114 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSG-LGGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAN-----DILK--KDFP 114 (263)
T ss_pred HHHhCCCCCCCEEEEEcCC-CChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEEC-----Cccc--CCCC
Confidence 4456678899999999886 35556667776788 999999999888888764211 1 1111 1100 0112
Q ss_pred cCCccEEEEc--c---C---ChHHHHHHHHhhccCccc
Q 022819 261 DGGADYSFEC--I---G---DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 261 ~g~~d~vld~--~---g---~~~~~~~~~~~l~~~G~i 290 (291)
.+.||+|+.. . + ....++.+.+.|++||+|
T Consensus 115 ~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~l 152 (263)
T PTZ00098 115 ENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGIL 152 (263)
T ss_pred CCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEE
Confidence 2378988852 1 1 135678888999999986
No 385
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=94.41 E-value=0.42 Score=45.26 Aligned_cols=97 Identities=13% Similarity=0.131 Sum_probs=60.5
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCce--EeCCCCCCchHHHHHHHH
Q 022819 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRI 259 (291)
Q Consensus 187 ~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g-~~~vi~~~~~~~~~~~a~~----~g~~~--~i~~~~~~~~~~~~~~~~ 259 (291)
...+++++++||=.++|+ |..+++++..++ ..+|+++|.++++++.+++ +|... ++..+. ..+ ...
T Consensus 231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da--~~l----~~~ 303 (431)
T PRK14903 231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADA--ERL----TEY 303 (431)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECch--hhh----hhh
Confidence 345678899998887653 444555666652 2389999999999887753 56543 222211 122 112
Q ss_pred hcCCccEEEE---ccCC-------------------------hHHHHHHHHhhccCccc
Q 022819 260 TDGGADYSFE---CIGD-------------------------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 260 ~~g~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~i 290 (291)
..+.||.|+- |+|. ...+..+++.|++||++
T Consensus 304 ~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~L 362 (431)
T PRK14903 304 VQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGIL 362 (431)
T ss_pred hhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 2347998774 4332 12367888999999976
No 386
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.41 E-value=0.025 Score=45.13 Aligned_cols=85 Identities=22% Similarity=0.238 Sum_probs=51.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCC----CchHHHHHHHHhcCCccEEEEccC
Q 022819 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN----NEPVQQVIKRITDGGADYSFECIG 272 (291)
Q Consensus 197 vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~----~~~~~~~~~~~~~g~~d~vld~~g 272 (291)
|+|+|+|.+|...+..++..|. .|..+.+.+ +.+..++.|........+. ....... ......+|++|-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6789999999999888888998 888888877 7777776654322211000 0000000 112247999999987
Q ss_pred ChHHHHHHHHhhcc
Q 022819 273 DTGMITTALQSCCD 286 (291)
Q Consensus 273 ~~~~~~~~~~~l~~ 286 (291)
... ...+++.+++
T Consensus 77 a~~-~~~~l~~l~~ 89 (151)
T PF02558_consen 77 AYQ-LEQALQSLKP 89 (151)
T ss_dssp GGG-HHHHHHHHCT
T ss_pred ccc-hHHHHHHHhh
Confidence 743 3445554443
No 387
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.40 E-value=0.23 Score=44.06 Aligned_cols=45 Identities=18% Similarity=0.178 Sum_probs=38.0
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022819 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (291)
Q Consensus 190 ~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a 234 (291)
+...+++++|+|+|+.+++++..+..+|+.++..+.++.++.+.+
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~l 162 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKAL 162 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 344567899999999999999999999997899999988876654
No 388
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.39 E-value=0.16 Score=42.92 Aligned_cols=35 Identities=37% Similarity=0.522 Sum_probs=30.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
...+|+|+|+|++|...++.+...|..+++.+|.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34679999999999999999999999889999876
No 389
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.37 E-value=0.33 Score=41.72 Aligned_cols=77 Identities=22% Similarity=0.325 Sum_probs=49.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCce-E--eCCCCCCchHHHHHHHHh--cCCc
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRIT--DGGA 264 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~-~--i~~~~~~~~~~~~~~~~~--~g~~ 264 (291)
+++||.|+ |.+|..++..+...|. +|+++++++++.+.+.. .+... . .|..+ ..++...+.+.. .+++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGGL 79 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCCC
Confidence 57999987 9999999999888999 89999998876655432 22221 1 23332 233333333322 2368
Q ss_pred cEEEEccCC
Q 022819 265 DYSFECIGD 273 (291)
Q Consensus 265 d~vld~~g~ 273 (291)
|++|.+.+.
T Consensus 80 d~vi~~a~~ 88 (255)
T TIGR01963 80 DILVNNAGI 88 (255)
T ss_pred CEEEECCCC
Confidence 999987764
No 390
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=94.34 E-value=0.63 Score=39.42 Aligned_cols=85 Identities=18% Similarity=0.181 Sum_probs=52.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEcc
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~-~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~ 271 (291)
++++|||+|+|.+|..-++.+...|+ .|++++.... .+..+.+.|--..+. .+ .. ...+ .++++|+-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~--~~-~~dl-----~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RC--FD-ADIL-----EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CC--CC-HHHh-----CCcEEEEECC
Confidence 46799999999999999999999999 8888865432 333333333212222 11 11 0111 2688999998
Q ss_pred CChHHHHHHHHhhccC
Q 022819 272 GDTGMITTALQSCCDV 287 (291)
Q Consensus 272 g~~~~~~~~~~~l~~~ 287 (291)
+.+..-......++..
T Consensus 78 ~d~~ln~~i~~~a~~~ 93 (205)
T TIGR01470 78 DDEELNRRVAHAARAR 93 (205)
T ss_pred CCHHHHHHHHHHHHHc
Confidence 8864444444444433
No 391
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.33 E-value=0.31 Score=40.18 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=28.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022819 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (291)
Q Consensus 196 ~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~ 228 (291)
+|+|+|+|++|...++.+...|..++..+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 488999999999999999899998888888764
No 392
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=94.31 E-value=0.3 Score=45.07 Aligned_cols=98 Identities=21% Similarity=0.350 Sum_probs=62.3
Q ss_pred hhcCCCCCCEEEEE-cC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce--EeCCCCCCchHHHHHHH
Q 022819 187 NVADISKGSTVVIF-GL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE--FLNPNDNNEPVQQVIKR 258 (291)
Q Consensus 187 ~~~~~~~~~~vlV~-G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~--~i~~~~~~~~~~~~~~~ 258 (291)
...+.++|++||-. ++ |+--...+++....|. .|+++|.++.|++.+ +++|... +++.++ ..+ ...
T Consensus 150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~-iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~--~~~---~~~ 223 (355)
T COG0144 150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENEGA-IVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDA--RRL---AEL 223 (355)
T ss_pred HHcCCCCcCEEEEECCCCCCHHHHHHHhcCCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCceEEEeccc--ccc---ccc
Confidence 56788999999888 33 6444444444444455 789999999998766 4578874 444332 111 111
Q ss_pred HhcC-CccEEE-E--ccCC-------------------------hHHHHHHHHhhccCccc
Q 022819 259 ITDG-GADYSF-E--CIGD-------------------------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 259 ~~~g-~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~G~i 290 (291)
...+ .||.|+ | |+|. ...+..+++++++||+|
T Consensus 224 ~~~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~GG~L 284 (355)
T COG0144 224 LPGGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGGVL 284 (355)
T ss_pred ccccCcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 1222 488544 4 5554 45788889999999986
No 393
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=94.30 E-value=0.23 Score=43.17 Aligned_cols=92 Identities=14% Similarity=0.183 Sum_probs=58.8
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCc-eEeCCCCCCchHHHHHHHHhcCCccEE
Q 022819 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDGGADYS 267 (291)
Q Consensus 189 ~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~-~~i~~~~~~~~~~~~~~~~~~g~~d~v 267 (291)
....++.+||-+|+|. |..+..+++ .|. +++++|.+++.++.+++.... .++..+. .++ .+.++.+|+|
T Consensus 38 l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~--~~~-----~~~~~~fD~V 107 (251)
T PRK10258 38 LPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI--ESL-----PLATATFDLA 107 (251)
T ss_pred cCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc--ccC-----cCCCCcEEEE
Confidence 3344678899999874 555555554 576 999999999999888775321 2222211 110 1122368988
Q ss_pred EEccC------ChHHHHHHHHhhccCccc
Q 022819 268 FECIG------DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 268 ld~~g------~~~~~~~~~~~l~~~G~i 290 (291)
+.... ....+..+.+.|+++|.+
T Consensus 108 ~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l 136 (251)
T PRK10258 108 WSNLAVQWCGNLSTALRELYRVVRPGGVV 136 (251)
T ss_pred EECchhhhcCCHHHHHHHHHHHcCCCeEE
Confidence 86432 135688888999999875
No 394
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.29 E-value=0.31 Score=44.96 Aligned_cols=36 Identities=19% Similarity=0.293 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~ 228 (291)
.+.+|+|+|+|++|..++..+...|..++..+|.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 347899999999999999999999998988887653
No 395
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=94.29 E-value=0.53 Score=41.99 Aligned_cols=82 Identities=17% Similarity=0.261 Sum_probs=52.9
Q ss_pred EEEEEcCChHHHHH-HHHHHHcCCCeEEEE-cCChhh--HHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEcc
Q 022819 196 TVVIFGLGTVGLSV-AQGAKARGASRIIGV-DTNPEK--CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (291)
Q Consensus 196 ~vlV~G~g~~G~~~-i~~a~~~g~~~vi~~-~~~~~~--~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~ 271 (291)
++.|+|+|.+|... ..+.+..+. .+.++ +.++++ ++.++++|...... ++...+.. ..+|+||+++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e~ll~~---~dIDaV~iaT 72 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE------GVDGLLAN---PDIDIVFDAT 72 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC------CHHHHhcC---CCCCEEEECC
Confidence 57889999999865 455555567 55544 444443 56778888654431 22222221 3799999999
Q ss_pred CChHHHHHHHHhhccC
Q 022819 272 GDTGMITTALQSCCDV 287 (291)
Q Consensus 272 g~~~~~~~~~~~l~~~ 287 (291)
+.....+.+..++..|
T Consensus 73 p~~~H~e~a~~al~aG 88 (285)
T TIGR03215 73 SAKAHARHARLLAELG 88 (285)
T ss_pred CcHHHHHHHHHHHHcC
Confidence 9977777776666654
No 396
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=94.29 E-value=0.53 Score=39.67 Aligned_cols=92 Identities=20% Similarity=0.222 Sum_probs=59.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCce--EeCCCCCCchHHHHHHH-HhcCCcc
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKR-ITDGGAD 265 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~--~i~~~~~~~~~~~~~~~-~~~g~~d 265 (291)
++.+||-+|+| .|..+..+++.....++++++.+++.++.+++ .+... ++.. +..+.+.. +..+.+|
T Consensus 40 ~~~~VLDiGcG-tG~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~~-----d~~~~l~~~~~~~~~D 113 (202)
T PRK00121 40 DAPIHLEIGFG-KGEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLCG-----DAVEVLLDMFPDGSLD 113 (202)
T ss_pred CCCeEEEEccC-CCHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEec-----CHHHHHHHHcCccccc
Confidence 66788889986 46677777776543489999999998887764 23222 2221 22122332 2234789
Q ss_pred EEEEccC--------------ChHHHHHHHHhhccCccc
Q 022819 266 YSFECIG--------------DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 266 ~vld~~g--------------~~~~~~~~~~~l~~~G~i 290 (291)
.|+-... .+..++.+.+.|+++|.|
T Consensus 114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l 152 (202)
T PRK00121 114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEI 152 (202)
T ss_pred eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEE
Confidence 8775332 245789999999999976
No 397
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.26 E-value=0.31 Score=42.21 Aligned_cols=76 Identities=14% Similarity=0.162 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC--CceE-eCCCCCCchHHHHHHHHhcCCccEEE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG--VTEF-LNPNDNNEPVQQVIKRITDGGADYSF 268 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g--~~~~-i~~~~~~~~~~~~~~~~~~g~~d~vl 268 (291)
.+.+|||+|+ |.+|..++..+...|. +|+++.++.++.......+ +..+ .|..+ . . ..+.+....++|+||
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d--~-~-~~l~~~~~~~~d~vi 90 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE--G-S-DKLVEAIGDDSDAVI 90 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC--C-H-HHHHHHhhcCCCEEE
Confidence 4678999997 9999999988888898 8888888777654332111 2111 23322 1 1 122222212689999
Q ss_pred EccCC
Q 022819 269 ECIGD 273 (291)
Q Consensus 269 d~~g~ 273 (291)
.+.|.
T Consensus 91 ~~~g~ 95 (251)
T PLN00141 91 CATGF 95 (251)
T ss_pred ECCCC
Confidence 88764
No 398
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.25 E-value=0.3 Score=42.95 Aligned_cols=79 Identities=24% Similarity=0.306 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-------HH-H---HHHcCCce-E--eCCCCCCchHHHHHH
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-------CE-K---AKAFGVTE-F--LNPNDNNEPVQQVIK 257 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~-------~~-~---a~~~g~~~-~--i~~~~~~~~~~~~~~ 257 (291)
+++++||.|+ |++|..++..+...|+ +|++++++.++ ++ . +++.+... . .|..+ .....+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~ 82 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD-EDQVAAAVA 82 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHH
Confidence 4578999987 8999999999888999 88888876532 11 1 22233322 2 23332 223333333
Q ss_pred HHh--cCCccEEEEccCC
Q 022819 258 RIT--DGGADYSFECIGD 273 (291)
Q Consensus 258 ~~~--~g~~d~vld~~g~ 273 (291)
+.. .+.+|++|.+.|.
T Consensus 83 ~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 83 KAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 221 1479999998875
No 399
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.25 E-value=0.23 Score=44.10 Aligned_cols=78 Identities=23% Similarity=0.326 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh----HHHHHHcCCce--EeCCCCCCch---HHHHHHHHhcC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK----CEKAKAFGVTE--FLNPNDNNEP---VQQVIKRITDG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~----~~~a~~~g~~~--~i~~~~~~~~---~~~~~~~~~~g 262 (291)
+|+.|||.|+ +++|++.++=...+|+ +++.+|.+++. .+.+++.|-.+ ..|-.+ .++ ..+++++.. |
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~-G 113 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEV-G 113 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhc-C
Confidence 6899999987 7999988887778898 88888877653 33444445222 344443 233 344444432 4
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|++++..|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 78999998885
No 400
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.24 E-value=0.41 Score=41.73 Aligned_cols=79 Identities=27% Similarity=0.373 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g 262 (291)
++++++|.|+ +++|..++..+...|+ +++.+++++++.+.+ ++.+... . .|..+ .......+.+.. .+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 5678999987 8999999988888999 888888887765433 2334322 2 23322 122222333221 14
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999998875
No 401
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.22 E-value=0.26 Score=42.27 Aligned_cols=79 Identities=19% Similarity=0.260 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhh-HHHH---HHcCCceE---eCCCCCCchHHHHHHHHh--c
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEK-CEKA---KAFGVTEF---LNPNDNNEPVQQVIKRIT--D 261 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~-~~~~~~-~~~a---~~~g~~~~---i~~~~~~~~~~~~~~~~~--~ 261 (291)
++++++|+|+ |++|..+++.+...|+ +++.+ .+++.+ .+.+ ++.+.... .|..+ ..+..+.+.+.. .
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 3578899987 9999999999999999 66664 333332 2222 33344332 23322 123333333322 1
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+++|+++.+.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 478999999885
No 402
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.22 E-value=0.39 Score=41.55 Aligned_cols=79 Identities=16% Similarity=0.253 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g 262 (291)
++++++|.|+ +++|..++..+...|+ +++.+++++++.+.+ ++.+... . .|..+ ..+..+.+.... .+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4789999987 8999999998889999 888888777665433 2233322 2 23332 123333333322 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 403
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.21 E-value=0.26 Score=42.74 Aligned_cols=76 Identities=18% Similarity=0.239 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCce-EeCCCCCCchHHHHHHHHh--cCCccEEE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~-~i~~~~~~~~~~~~~~~~~--~g~~d~vl 268 (291)
+++++||.|+ |++|..+++.+...|+ +|+.+++++++.. .-.... ..|..+ .++....+.+.. .+.+|+++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTT-AEGCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999987 8999999999988999 8999987754321 001111 123322 122222222221 24789999
Q ss_pred EccCC
Q 022819 269 ECIGD 273 (291)
Q Consensus 269 d~~g~ 273 (291)
.+.|.
T Consensus 83 ~~ag~ 87 (260)
T PRK06523 83 HVLGG 87 (260)
T ss_pred ECCcc
Confidence 98873
No 404
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.20 E-value=0.47 Score=41.90 Aligned_cols=97 Identities=11% Similarity=0.058 Sum_probs=57.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCc--eEeCCCC---CCchHHHHHHHHhcCCccE
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT--EFLNPND---NNEPVQQVIKRITDGGADY 266 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~--~~i~~~~---~~~~~~~~~~~~~~g~~d~ 266 (291)
..+++||++|+|. |..+..+++.....++.+++.+++-.+.+++.-.. ..++... ...+..+.+++. .+.+|+
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~-~~~yDv 148 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADT-ENTFDV 148 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhC-CCCccE
Confidence 4556999998764 44455666665556899999988887777763100 0000000 002333344332 348997
Q ss_pred EEEccC----------ChHHHHHHHHhhccCccc
Q 022819 267 SFECIG----------DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 267 vld~~g----------~~~~~~~~~~~l~~~G~i 290 (291)
|+-... ..+.++.+.+.|+++|.+
T Consensus 149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~l 182 (270)
T TIGR00417 149 IIVDSTDPVGPAETLFTKEFYELLKKALNEDGIF 182 (270)
T ss_pred EEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEE
Confidence 764222 235567889999999976
No 405
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.19 E-value=0.38 Score=44.60 Aligned_cols=35 Identities=23% Similarity=0.446 Sum_probs=30.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
.+.+|+|+|+|++|..++..+...|..+++.+|.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45679999999999999999999999899888765
No 406
>PRK08618 ornithine cyclodeaminase; Validated
Probab=94.18 E-value=0.58 Score=42.55 Aligned_cols=86 Identities=13% Similarity=0.105 Sum_probs=56.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHH-HHcCCCeEEEEcCChhhHHHHH-H----cCCceEeCCCCCCchHHHHHHHHhcCCcc
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGA-KARGASRIIGVDTNPEKCEKAK-A----FGVTEFLNPNDNNEPVQQVIKRITDGGAD 265 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a-~~~g~~~vi~~~~~~~~~~~a~-~----~g~~~~i~~~~~~~~~~~~~~~~~~g~~d 265 (291)
...++++|+|+|..|...+..+ ...++++|.++++++++.+.+. + ++.. +..+ .+..+.+ ...|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~----~~~~~~~-----~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV----NSADEAI-----EEAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe----CCHHHHH-----hcCC
Confidence 4567899999999998777554 4678889999999988866443 2 2432 2222 2222223 2589
Q ss_pred EEEEccCChHHHHHHHHhhccCcc
Q 022819 266 YSFECIGDTGMITTALQSCCDVRS 289 (291)
Q Consensus 266 ~vld~~g~~~~~~~~~~~l~~~G~ 289 (291)
+|+.|++...-+- . +.+++|-.
T Consensus 195 iVi~aT~s~~p~i-~-~~l~~G~h 216 (325)
T PRK08618 195 IIVTVTNAKTPVF-S-EKLKKGVH 216 (325)
T ss_pred EEEEccCCCCcch-H-HhcCCCcE
Confidence 9999998753322 2 67777643
No 407
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.17 E-value=0.48 Score=41.54 Aligned_cols=79 Identities=15% Similarity=0.271 Sum_probs=48.5
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCceEe--CCCCCCchHHHHHHHHhc--
Q 022819 193 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFL--NPNDNNEPVQQVIKRITD-- 261 (291)
Q Consensus 193 ~~~~vlV~G~g---~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~~i--~~~~~~~~~~~~~~~~~~-- 261 (291)
+++++||.|++ ++|.++++.+...|+ +|+.+++++...+.+++ .+....+ |..+ .++..+.+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhc
Confidence 46889999873 799999988888999 88888776321222222 2322222 3332 2333334433322
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+.+|+++++.|.
T Consensus 83 g~iD~linnAg~ 94 (262)
T PRK07984 83 PKFDGFVHSIGF 94 (262)
T ss_pred CCCCEEEECCcc
Confidence 479999999874
No 408
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=94.15 E-value=0.76 Score=38.80 Aligned_cols=78 Identities=18% Similarity=0.148 Sum_probs=46.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hhH-HHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEc
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKC-EKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~-~~~-~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~ 270 (291)
++.+|||+|+|.+|...+..+...|+ .|+++.... +.+ +++.+ +.- ...... +. +..-.++|+|+-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i-~~~~~~----~~----~~~l~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKI-RWKQKE----FE----PSDIVDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCE-EEEecC----CC----hhhcCCceEEEEc
Confidence 56899999999999999988888998 788875432 122 22222 211 111111 10 0001268999999
Q ss_pred cCChHHHHHHHH
Q 022819 271 IGDTGMITTALQ 282 (291)
Q Consensus 271 ~g~~~~~~~~~~ 282 (291)
++.+.. +..+.
T Consensus 78 T~d~el-N~~i~ 88 (202)
T PRK06718 78 TNDPRV-NEQVK 88 (202)
T ss_pred CCCHHH-HHHHH
Confidence 988543 44443
No 409
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.14 E-value=1 Score=32.59 Aligned_cols=76 Identities=24% Similarity=0.398 Sum_probs=49.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcC---CCeEE-EEcCChhhHHHH-HHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEc
Q 022819 196 TVVIFGLGTVGLSVAQGAKARG---ASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (291)
Q Consensus 196 ~vlV~G~g~~G~~~i~~a~~~g---~~~vi-~~~~~~~~~~~a-~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~ 270 (291)
+|.++|+|.+|.+.+.-....| . +|+ +..+++++.+.+ ++++..... .+..+.+++ .|+||-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~-----advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQE-----ADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHHH-----TSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhhcc-----CCEEEEE
Confidence 4677899999999999999888 6 677 548999887766 556643222 123334443 7999999
Q ss_pred cCChHHHHHHHHhh
Q 022819 271 IGDTGMITTALQSC 284 (291)
Q Consensus 271 ~g~~~~~~~~~~~l 284 (291)
+... .+.+.++.+
T Consensus 69 v~p~-~~~~v~~~i 81 (96)
T PF03807_consen 69 VKPQ-QLPEVLSEI 81 (96)
T ss_dssp S-GG-GHHHHHHHH
T ss_pred ECHH-HHHHHHHHH
Confidence 8874 344444433
No 410
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.11 E-value=0.16 Score=46.33 Aligned_cols=77 Identities=13% Similarity=0.168 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcC--Cce-EeCCCCCCchHHHHHHHHhcC-CccE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFG--VTE-FLNPNDNNEPVQQVIKRITDG-GADY 266 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a-~~~g--~~~-~i~~~~~~~~~~~~~~~~~~g-~~d~ 266 (291)
++.+|||.|+ |.+|..+++.+...|. +|++++++++..... +.++ ... .+..+-.+. +.+.++... .+|+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~d~ 78 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA---AKLRKAIAEFKPEI 78 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH---HHHHHHHhhcCCCE
Confidence 4689999987 9999999999999998 898888766543221 2222 111 121111111 223333333 6899
Q ss_pred EEEccCC
Q 022819 267 SFECIGD 273 (291)
Q Consensus 267 vld~~g~ 273 (291)
||.+.+.
T Consensus 79 vih~A~~ 85 (349)
T TIGR02622 79 VFHLAAQ 85 (349)
T ss_pred EEECCcc
Confidence 9998873
No 411
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.11 E-value=0.42 Score=44.64 Aligned_cols=81 Identities=20% Similarity=0.331 Sum_probs=50.3
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-------HHHHc-CCceE-eCCCCCCchHHHHHHHH
Q 022819 190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE-------KAKAF-GVTEF-LNPNDNNEPVQQVIKRI 259 (291)
Q Consensus 190 ~~~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~-------~a~~~-g~~~~-i~~~~~~~~~~~~~~~~ 259 (291)
+-..+.+|||+|+ |.+|..++..+...|. +|+++.++..+.+ ..+.. ++..+ .|..+ .+.+...++..
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~~ 133 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFSE 133 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHHh
Confidence 3456778999987 9999999999988998 8999988765432 11112 22222 23332 12233333322
Q ss_pred hcCCccEEEEccCC
Q 022819 260 TDGGADYSFECIGD 273 (291)
Q Consensus 260 ~~g~~d~vld~~g~ 273 (291)
..++|+||.|.+.
T Consensus 134 -~~~~D~Vi~~aa~ 146 (390)
T PLN02657 134 -GDPVDVVVSCLAS 146 (390)
T ss_pred -CCCCcEEEECCcc
Confidence 1169999998874
No 412
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.09 E-value=0.38 Score=41.27 Aligned_cols=80 Identities=18% Similarity=0.246 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH----HHcCCce-EeCCCCC-CchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEKA----KAFGVTE-FLNPNDN-NEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~-~~~~~~~~~~a----~~~g~~~-~i~~~~~-~~~~~~~~~~~~--~g 262 (291)
++++++|.|+ |.+|+.++..+...|+ +|+. ..++.++.+.+ ++.+... .+..+.. +.+....+.+.. .+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4578999987 9999999999999998 6655 46666554332 2334322 2222211 233333333332 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 413
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.09 E-value=0.21 Score=40.99 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=37.8
Q ss_pred CCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc
Q 022819 193 KGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (291)
Q Consensus 193 ~~~~vlV~G~g-~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~ 237 (291)
.|..|++.|+| ++|...++-+...|+ +||++.++++.+..+-+.
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e 50 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKE 50 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhh
Confidence 56788898884 899999999999999 999999999988766543
No 414
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=94.08 E-value=0.44 Score=42.81 Aligned_cols=87 Identities=17% Similarity=0.195 Sum_probs=51.2
Q ss_pred CEEEEEcCChHHHHHH-HHHHHcCCCeEEEEcCChh--hHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEcc
Q 022819 195 STVVIFGLGTVGLSVA-QGAKARGASRIIGVDTNPE--KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (291)
Q Consensus 195 ~~vlV~G~g~~G~~~i-~~a~~~g~~~vi~~~~~~~--~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~ 271 (291)
-++.|+|.|.+|...+ .+.+..+.+-+.+++.+++ .++.++++|..... .++...+.......+|+||+++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~~~~~dIDiVf~AT 78 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAMPEFDDIDIVFDAT 78 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhCcCCCCCCEEEECC
Confidence 4688999999998744 4444446633444455443 34667788764322 2232233221013699999999
Q ss_pred CChHHHHHHHHhhccC
Q 022819 272 GDTGMITTALQSCCDV 287 (291)
Q Consensus 272 g~~~~~~~~~~~l~~~ 287 (291)
+.....+.+..++..|
T Consensus 79 ~a~~H~e~a~~a~eaG 94 (302)
T PRK08300 79 SAGAHVRHAAKLREAG 94 (302)
T ss_pred CHHHHHHHHHHHHHcC
Confidence 9865555555555444
No 415
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.08 E-value=0.38 Score=42.05 Aligned_cols=76 Identities=22% Similarity=0.267 Sum_probs=48.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-Ee--CCCCCCchHHHHHHHHh--cCCcc
Q 022819 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD 265 (291)
Q Consensus 196 ~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g~~d 265 (291)
+++|+|+ |++|..++..+...|. +|+.++++.++.+.+ +..+... .+ |..+ ..++.+.+.+.. .+++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 6889987 9999999988888999 898888887765533 2223322 22 2221 122333333222 13799
Q ss_pred EEEEccCC
Q 022819 266 YSFECIGD 273 (291)
Q Consensus 266 ~vld~~g~ 273 (291)
+++.+.|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99998884
No 416
>PRK07574 formate dehydrogenase; Provisional
Probab=94.08 E-value=0.42 Score=44.51 Aligned_cols=45 Identities=29% Similarity=0.382 Sum_probs=35.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g 238 (291)
.+++|.|+|.|.+|..+++.++.+|+ +|++.+++....+..+.++
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g 235 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG 235 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence 56789999999999999999999999 9999988653333333343
No 417
>PRK12743 oxidoreductase; Provisional
Probab=94.00 E-value=0.56 Score=40.61 Aligned_cols=78 Identities=17% Similarity=0.191 Sum_probs=47.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHH----HHHcCCce-E--eCCCCCCchHHHHHHHHh--cC
Q 022819 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEK----AKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 194 ~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~-~~~~~~~~----a~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g 262 (291)
++++||.|+ +++|..+++.+...|+ +|+.+. ++.++.+. +++.+... . .|..+ ..+....+.+.. .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 468999987 8999999999999999 777664 34443332 23345332 2 23322 122223333322 13
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 418
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=93.99 E-value=0.29 Score=40.59 Aligned_cols=89 Identities=16% Similarity=0.150 Sum_probs=54.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCce--EeCCCCCCchHHHHHHHHhcCCccE
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE--FLNPNDNNEPVQQVIKRITDGGADY 266 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~----~~g~~~--~i~~~~~~~~~~~~~~~~~~g~~d~ 266 (291)
++++||-+|+| .|..++.+++.....+|++++.+++..+.++ +.+.+. ++.. +..+ + ...+.+|+
T Consensus 42 ~~~~vLDiGcG-tG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~-----d~~~-~--~~~~~fD~ 112 (181)
T TIGR00138 42 DGKKVIDIGSG-AGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG-----RAED-F--QHEEQFDV 112 (181)
T ss_pred CCCeEEEecCC-CCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec-----chhh-c--cccCCccE
Confidence 37889999875 3555556565543338999999998766654 345432 2221 1111 1 11247998
Q ss_pred EEEcc-C-ChHHHHHHHHhhccCccc
Q 022819 267 SFECI-G-DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 267 vld~~-g-~~~~~~~~~~~l~~~G~i 290 (291)
|+-.. . -+..++.+.+.|+++|++
T Consensus 113 I~s~~~~~~~~~~~~~~~~LkpgG~l 138 (181)
T TIGR00138 113 ITSRALASLNVLLELTLNLLKVGGYF 138 (181)
T ss_pred EEehhhhCHHHHHHHHHHhcCCCCEE
Confidence 87543 1 245667778899999976
No 419
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=93.99 E-value=0.36 Score=42.49 Aligned_cols=96 Identities=14% Similarity=0.116 Sum_probs=60.9
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcC-------Cc--eEeCCCCCCchHHHHH
Q 022819 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFG-------VT--EFLNPNDNNEPVQQVI 256 (291)
Q Consensus 187 ~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~~g-------~~--~~i~~~~~~~~~~~~~ 256 (291)
+..++.++++||-+|+| .|..+..+++..+. .+|+++|.+++-++.+++.. .. .++..+. .++
T Consensus 67 ~~~~~~~~~~VLDlGcG-tG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~--~~l---- 139 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCG-SGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA--TDL---- 139 (261)
T ss_pred HHhCCCCCCEEEEECCc-CCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc--ccC----
Confidence 34467789999999886 35566677776652 38999999999888886421 11 1121111 110
Q ss_pred HHHhcCCccEEEEccC------ChHHHHHHHHhhccCccc
Q 022819 257 KRITDGGADYSFECIG------DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 257 ~~~~~g~~d~vld~~g------~~~~~~~~~~~l~~~G~i 290 (291)
.+.++.||.|+-..+ ....++++.+.|++||++
T Consensus 140 -p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l 178 (261)
T PLN02233 140 -PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRV 178 (261)
T ss_pred -CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEE
Confidence 111236898875322 135688999999999986
No 420
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.98 E-value=0.46 Score=42.61 Aligned_cols=79 Identities=19% Similarity=0.281 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHH-H---HHHcCCceE-e--CCCCCCchHHHHHHHHh-cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCE-K---AKAFGVTEF-L--NPNDNNEPVQQVIKRIT-DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~-~~~~-~---a~~~g~~~~-i--~~~~~~~~~~~~~~~~~-~g 262 (291)
+++++||+|+ +++|...+..+...|+ +|+.+++.. ++.+ . ++..|.... + |..+ .+...+.+.+.. .+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d-~~~~~~~~~~~~~~g 88 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ-RATADELVATAVGLG 88 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHhC
Confidence 4678999987 8999999999888999 888887643 2222 2 223343322 2 2222 122222222211 25
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
++|+++.+.|.
T Consensus 89 ~iD~li~nAG~ 99 (306)
T PRK07792 89 GLDIVVNNAGI 99 (306)
T ss_pred CCCEEEECCCC
Confidence 89999998875
No 421
>PRK06128 oxidoreductase; Provisional
Probab=93.97 E-value=0.39 Score=42.87 Aligned_cols=79 Identities=24% Similarity=0.276 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--h----HHHHHHcCCce-Ee--CCCCCCchHHHHHHHHh--
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--K----CEKAKAFGVTE-FL--NPNDNNEPVQQVIKRIT-- 260 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~--~----~~~a~~~g~~~-~i--~~~~~~~~~~~~~~~~~-- 260 (291)
+++++||.|+ |++|..++..+...|+ +|+.+.++.+ + .+.+++.+... .+ |..+ ..+..+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHHH
Confidence 4689999987 9999999999999999 7777654332 1 12233344332 22 3322 122333333322
Q ss_pred cCCccEEEEccCC
Q 022819 261 DGGADYSFECIGD 273 (291)
Q Consensus 261 ~g~~d~vld~~g~ 273 (291)
.+++|+++.+.|.
T Consensus 132 ~g~iD~lV~nAg~ 144 (300)
T PRK06128 132 LGGLDILVNIAGK 144 (300)
T ss_pred hCCCCEEEECCcc
Confidence 2479999998874
No 422
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=93.94 E-value=0.34 Score=39.30 Aligned_cols=73 Identities=18% Similarity=0.323 Sum_probs=51.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCC----CCchHHHHHHHHhcC-CccEEE
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND----NNEPVQQVIKRITDG-GADYSF 268 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~----~~~~~~~~~~~~~~g-~~d~vl 268 (291)
.+|+|.|+ |.+|.+.++..++.+. -|..++.++.... ....+++.+. .++...+++.+...+ .+|.||
T Consensus 4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~A-----d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~ 77 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQA-----DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF 77 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeecccccc-----cceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence 56888877 9999999999999998 8888887665431 1223343321 234455556666667 999999
Q ss_pred EccCC
Q 022819 269 ECIGD 273 (291)
Q Consensus 269 d~~g~ 273 (291)
...|+
T Consensus 78 CVAGG 82 (236)
T KOG4022|consen 78 CVAGG 82 (236)
T ss_pred Eeecc
Confidence 88776
No 423
>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells [].
Probab=93.91 E-value=0.58 Score=39.05 Aligned_cols=70 Identities=24% Similarity=0.358 Sum_probs=53.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEE
Q 022819 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF 268 (291)
Q Consensus 191 ~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vl 268 (291)
++++.+||-+|+| -|.....+.+.+++ ...+++.++++...+.+-|.. |+.. +.-+.+..+.++.||.|+
T Consensus 11 I~pgsrVLDLGCG-dG~LL~~L~~~k~v-~g~GvEid~~~v~~cv~rGv~-Viq~-----Dld~gL~~f~d~sFD~VI 80 (193)
T PF07021_consen 11 IEPGSRVLDLGCG-DGELLAYLKDEKQV-DGYGVEIDPDNVAACVARGVS-VIQG-----DLDEGLADFPDQSFDYVI 80 (193)
T ss_pred cCCCCEEEecCCC-chHHHHHHHHhcCC-eEEEEecCHHHHHHHHHcCCC-EEEC-----CHHHhHhhCCCCCccEEe
Confidence 6899999999997 46666667777888 999999999999988888876 4432 233356666666888877
No 424
>PRK08219 short chain dehydrogenase; Provisional
Probab=93.86 E-value=0.33 Score=40.89 Aligned_cols=74 Identities=14% Similarity=0.137 Sum_probs=46.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCceEeCCCCCCchHHHHHHHHhcC--CccEEEEc
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDG--GADYSFEC 270 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~g~~~~i~~~~~~~~~~~~~~~~~~g--~~d~vld~ 270 (291)
+++||.|+ |.+|..++..+... . +|++++++.++.+.+.+ .....++..+-.+. +.+.++... ++|.++.+
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTDP---EAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCCH---HHHHHHHHhcCCCCEEEEC
Confidence 57999987 99999998877766 6 89999998877655543 21112222221112 233333222 68999999
Q ss_pred cCC
Q 022819 271 IGD 273 (291)
Q Consensus 271 ~g~ 273 (291)
.|.
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 875
No 425
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=93.86 E-value=0.93 Score=39.92 Aligned_cols=97 Identities=12% Similarity=0.072 Sum_probs=58.6
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHH----HcCCceEeCCCCCCchHHHHHHHHhcC
Q 022819 188 VADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITDG 262 (291)
Q Consensus 188 ~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g-~~~vi~~~~~~~~~~~a~----~~g~~~~i~~~~~~~~~~~~~~~~~~g 262 (291)
...++++++||-.++|+ |..++.+++.++ ...|++++.++++++.++ +.|...+..... +... +.. ..+
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~---D~~~-~~~-~~~ 139 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF---DGRV-FGA-AVP 139 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC---CHHH-hhh-hcc
Confidence 34668899998887753 444455555543 238999999999987764 356543221111 1111 111 123
Q ss_pred CccEEEE---ccCC-------------------------hHHHHHHHHhhccCccc
Q 022819 263 GADYSFE---CIGD-------------------------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 263 ~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~i 290 (291)
.||.||- |+|. ...+..++++|++||+|
T Consensus 140 ~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~l 195 (264)
T TIGR00446 140 KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVL 195 (264)
T ss_pred CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 6897764 3332 23678888999999986
No 426
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.86 E-value=0.54 Score=40.98 Aligned_cols=79 Identities=16% Similarity=0.339 Sum_probs=48.4
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHH-HHc-CCc-eE--eCCCCCCchHHHHHHHHhc
Q 022819 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP---EKCEKA-KAF-GVT-EF--LNPNDNNEPVQQVIKRITD 261 (291)
Q Consensus 193 ~~~~vlV~G~---g~~G~~~i~~a~~~g~~~vi~~~~~~---~~~~~a-~~~-g~~-~~--i~~~~~~~~~~~~~~~~~~ 261 (291)
.+++++|.|+ +++|.++++.+...|+ +|+.+.++. ++++.+ +++ +.. .. .|..+ .++..+.+++...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence 4688999986 5999999998888999 888876542 333333 333 221 12 23332 2333333443322
Q ss_pred --CCccEEEEccCC
Q 022819 262 --GGADYSFECIGD 273 (291)
Q Consensus 262 --g~~d~vld~~g~ 273 (291)
+.+|+++.+.|.
T Consensus 84 ~~g~ld~lv~nag~ 97 (257)
T PRK08594 84 EVGVIHGVAHCIAF 97 (257)
T ss_pred hCCCccEEEECccc
Confidence 579999998763
No 427
>PRK08223 hypothetical protein; Validated
Probab=93.86 E-value=0.28 Score=43.69 Aligned_cols=35 Identities=29% Similarity=0.283 Sum_probs=30.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
...+|+|+|+|++|..++..+..+|..++..+|.+
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 45679999999999999999999999888888754
No 428
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=93.85 E-value=0.19 Score=44.65 Aligned_cols=44 Identities=25% Similarity=0.333 Sum_probs=37.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~ 235 (291)
..+++++|+|+|++|.+++..+..+|+.+|+++.++.++.+.+.
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~ 164 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELA 164 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 35678999999999999999999999669999999988765543
No 429
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=93.84 E-value=0.29 Score=38.32 Aligned_cols=33 Identities=36% Similarity=0.523 Sum_probs=28.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 022819 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226 (291)
Q Consensus 194 ~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~ 226 (291)
..+|+|+|+|++|..++..+...|..++..+|.
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~ 34 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDD 34 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCC
Confidence 468999999999999999999999988888875
No 430
>PLN03139 formate dehydrogenase; Provisional
Probab=93.83 E-value=0.44 Score=44.40 Aligned_cols=45 Identities=27% Similarity=0.259 Sum_probs=36.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g 238 (291)
.+++|.|+|.|.+|...++.++.+|+ +|++.+++....+..++.|
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g 242 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETG 242 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcC
Confidence 57899999999999999999999999 8999987654434444444
No 431
>PLN02823 spermine synthase
Probab=93.83 E-value=0.45 Score=43.49 Aligned_cols=96 Identities=10% Similarity=0.099 Sum_probs=59.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC-ce-Ee-CCCC--CCchHHHHHHHHhcCCccEE
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-TE-FL-NPND--NNEPVQQVIKRITDGGADYS 267 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~-~~-~i-~~~~--~~~~~~~~~~~~~~g~~d~v 267 (291)
..++|||+|+| -|..+..+++..+.+++++++.+++-.+.++++-. .. .. +.+- ...|....+++ ..+.+|+|
T Consensus 103 ~pk~VLiiGgG-~G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGG-EGSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCC-chHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 45789999875 34555667777666799999999999999987521 10 01 1000 01334445543 33489965
Q ss_pred E-EccC-----------ChHHHH-HHHHhhccCccc
Q 022819 268 F-ECIG-----------DTGMIT-TALQSCCDVRSI 290 (291)
Q Consensus 268 l-d~~g-----------~~~~~~-~~~~~l~~~G~i 290 (291)
| |... ..+.++ .+.+.|+++|.+
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvl 216 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIF 216 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCCcEE
Confidence 5 4221 123565 788899999975
No 432
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.81 E-value=0.64 Score=39.54 Aligned_cols=79 Identities=23% Similarity=0.359 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH-H---HHHcCCce-Ee--CCCCCCchHHHHHHHHhc--
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCE-K---AKAFGVTE-FL--NPNDNNEPVQQVIKRITD-- 261 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~-~~~-~---a~~~g~~~-~i--~~~~~~~~~~~~~~~~~~-- 261 (291)
+++++||.|+ |.+|...+..+...|+ +|+++.++.+ +.+ . ++..+... .+ |..+ ..++.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4578999987 9999999999999999 7766655443 222 1 22223222 22 3322 1233333333322
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+++|.++.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 368999998874
No 433
>PRK07775 short chain dehydrogenase; Provisional
Probab=93.78 E-value=0.78 Score=40.24 Aligned_cols=79 Identities=20% Similarity=0.269 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-Ee--CCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g 262 (291)
+.++++|+|+ |.+|..+++.+...|+ +|+++.++.++.+.+ +..+... .+ |..+ ..+..+.+.+.. .+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 3468999987 9999999998888999 888888877654432 2234322 22 3322 123333333321 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|++|.+.|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 78999998875
No 434
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=93.77 E-value=0.24 Score=37.29 Aligned_cols=90 Identities=22% Similarity=0.282 Sum_probs=54.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCc---eEeCCCCCCchHHHHHHHHhcCCccE
Q 022819 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVT---EFLNPNDNNEPVQQVIKRITDGGADY 266 (291)
Q Consensus 194 ~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~----g~~---~~i~~~~~~~~~~~~~~~~~~g~~d~ 266 (291)
|.+||-.|+| .|...+.+++.. ..++++++.++...++++.. +.. .++. .++.+....+..+.+|+
T Consensus 1 g~~vlD~~~G-~G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~D~ 73 (117)
T PF13659_consen 1 GDRVLDPGCG-SGTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIV-----GDARDLPEPLPDGKFDL 73 (117)
T ss_dssp TEEEEEETST-TCHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE-----SHHHHHHHTCTTT-EEE
T ss_pred CCEEEEcCcc-hHHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEE-----CchhhchhhccCceeEE
Confidence 4577777654 344444555544 34999999999998888652 221 1221 34444443444458998
Q ss_pred EEEccCC--------------hHHHHHHHHhhccCccc
Q 022819 267 SFECIGD--------------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 267 vld~~g~--------------~~~~~~~~~~l~~~G~i 290 (291)
|+-+..- ...++.+.+.|+++|.+
T Consensus 74 Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~ 111 (117)
T PF13659_consen 74 IVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVL 111 (117)
T ss_dssp EEE--STTSBTT----GGCHHHHHHHHHHHHEEEEEEE
T ss_pred EEECCCCccccccchhhHHHHHHHHHHHHHHcCCCeEE
Confidence 8864332 23478899999999975
No 435
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=93.75 E-value=0.41 Score=42.86 Aligned_cols=124 Identities=18% Similarity=0.188 Sum_probs=67.7
Q ss_pred ccceEECCCCCChhhhhhhhhhhhhhHhHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022819 156 SGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (291)
Q Consensus 156 ~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~ 235 (291)
...++++.+++-|- ...+-.|++..-+.....+++.++|-+|+| .|.+++. |..+|+++++++|.++--.+.++
T Consensus 129 ~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le~~~~~g~~vlDvGcG-SGILaIA-a~kLGA~~v~g~DiDp~AV~aa~ 202 (300)
T COG2264 129 DELNIELDPGLAFG----TGTHPTTSLCLEALEKLLKKGKTVLDVGCG-SGILAIA-AAKLGAKKVVGVDIDPQAVEAAR 202 (300)
T ss_pred CceEEEEccccccC----CCCChhHHHHHHHHHHhhcCCCEEEEecCC-hhHHHHH-HHHcCCceEEEecCCHHHHHHHH
Confidence 34556666666432 233444444422222345799999999985 3544443 44568879999999886665554
Q ss_pred H----cCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCC---hHHHHHHHHhhccCccc
Q 022819 236 A----FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD---TGMITTALQSCCDVRSI 290 (291)
Q Consensus 236 ~----~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~---~~~~~~~~~~l~~~G~i 290 (291)
+ =+..... ... ... .......+.+|+|+-++=. -....+....++++|++
T Consensus 203 eNa~~N~v~~~~-~~~-~~~---~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~l 259 (300)
T COG2264 203 ENARLNGVELLV-QAK-GFL---LLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRL 259 (300)
T ss_pred HHHHHcCCchhh-hcc-ccc---chhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceE
Confidence 3 1222100 000 000 0111122479988865532 13456677788888865
No 436
>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional
Probab=93.75 E-value=0.67 Score=40.90 Aligned_cols=89 Identities=13% Similarity=0.083 Sum_probs=56.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHc----CCCeEEEEcCChhhHHHHHHcCCc-eEeCCCCCCchHHHHHHHHhcCCccE
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKAR----GASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDGGADY 266 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~----g~~~vi~~~~~~~~~~~a~~~g~~-~~i~~~~~~~~~~~~~~~~~~g~~d~ 266 (291)
.+..+||-+|+| .|..+..+++.. +. .++++|.+++-++.+++.... .++..+. .++ .+.++.+|+
T Consensus 84 ~~~~~vLDiGcG-~G~~~~~l~~~~~~~~~~-~v~giD~s~~~l~~A~~~~~~~~~~~~d~--~~l-----p~~~~sfD~ 154 (272)
T PRK11088 84 EKATALLDIGCG-EGYYTHALADALPEITTM-QLFGLDISKVAIKYAAKRYPQVTFCVASS--HRL-----PFADQSLDA 154 (272)
T ss_pred CCCCeEEEECCc-CCHHHHHHHHhcccccCC-eEEEECCCHHHHHHHHHhCCCCeEEEeec--ccC-----CCcCCceeE
Confidence 345678888885 455666666553 23 799999999988888754221 1221111 110 112337999
Q ss_pred EEEccCChHHHHHHHHhhccCccc
Q 022819 267 SFECIGDTGMITTALQSCCDVRSI 290 (291)
Q Consensus 267 vld~~g~~~~~~~~~~~l~~~G~i 290 (291)
|+.... +..+++..+.|+++|.+
T Consensus 155 I~~~~~-~~~~~e~~rvLkpgG~l 177 (272)
T PRK11088 155 IIRIYA-PCKAEELARVVKPGGIV 177 (272)
T ss_pred EEEecC-CCCHHHHHhhccCCCEE
Confidence 987554 45678899999999976
No 437
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=93.75 E-value=0.42 Score=41.64 Aligned_cols=79 Identities=18% Similarity=0.254 Sum_probs=46.8
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh------hhHHHHHHcCC-ceE--eCCCCCCchHHHHHHHHh
Q 022819 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP------EKCEKAKAFGV-TEF--LNPNDNNEPVQQVIKRIT 260 (291)
Q Consensus 193 ~~~~vlV~G~---g~~G~~~i~~a~~~g~~~vi~~~~~~------~~~~~a~~~g~-~~~--i~~~~~~~~~~~~~~~~~ 260 (291)
++++++|.|+ +++|.+++..+...|+ +|+.+.++. +..+.+++.+. ... .|..+ .++..+.+.+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD-DAQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC-HHHHHHHHHHHH
Confidence 4688999985 4899999999888999 777664322 22333322221 122 23322 233333333332
Q ss_pred --cCCccEEEEccCC
Q 022819 261 --DGGADYSFECIGD 273 (291)
Q Consensus 261 --~g~~d~vld~~g~ 273 (291)
.+.+|+++++.|.
T Consensus 83 ~~~g~iD~lv~nag~ 97 (258)
T PRK07370 83 QKWGKLDILVHCLAF 97 (258)
T ss_pred HHcCCCCEEEEcccc
Confidence 2479999999874
No 438
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=93.73 E-value=0.45 Score=44.70 Aligned_cols=74 Identities=20% Similarity=0.316 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCc-eE--eCCCCCCchHHHHHHHHhcCCccEE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVT-EF--LNPNDNNEPVQQVIKRITDGGADYS 267 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~~g~~-~~--i~~~~~~~~~~~~~~~~~~g~~d~v 267 (291)
++++++|.|+ |++|.+.+..+...|+ +|+++++++++.+... ..... .. .|..+ . +.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd--~---~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ--E---AALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC--H---HHHHHHh-CCCCEE
Confidence 4689999987 9999999998888999 8998988776654321 11111 12 23322 2 1233322 369999
Q ss_pred EEccCC
Q 022819 268 FECIGD 273 (291)
Q Consensus 268 ld~~g~ 273 (291)
+.+.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 988774
No 439
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=93.73 E-value=0.53 Score=44.55 Aligned_cols=77 Identities=19% Similarity=0.210 Sum_probs=54.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCc-eEeCCCCCCchHHHHHHHHhcCCccEEEEcc
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~-~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~ 271 (291)
+..+++|+|.|.+|..+++.+...|. .+++++.++++.+.+++.+.. .++.-+ ..-.+.+++..-..+|.|+-++
T Consensus 230 ~~~~iiIiG~G~~g~~l~~~L~~~~~-~v~vid~~~~~~~~~~~~~~~~~~i~gd---~~~~~~L~~~~~~~a~~vi~~~ 305 (453)
T PRK09496 230 PVKRVMIVGGGNIGYYLAKLLEKEGY-SVKLIERDPERAEELAEELPNTLVLHGD---GTDQELLEEEGIDEADAFIALT 305 (453)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHCCCCeEEECC---CCCHHHHHhcCCccCCEEEECC
Confidence 46789999999999999999999998 899999999988877764322 223222 1122344444333788888777
Q ss_pred CC
Q 022819 272 GD 273 (291)
Q Consensus 272 g~ 273 (291)
+.
T Consensus 306 ~~ 307 (453)
T PRK09496 306 ND 307 (453)
T ss_pred CC
Confidence 75
No 440
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.72 E-value=0.71 Score=40.28 Aligned_cols=79 Identities=19% Similarity=0.334 Sum_probs=48.8
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCC---hhhHHHH-HHcCCceE--eCCCCCCchHHHHHHHHhc--
Q 022819 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTN---PEKCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRITD-- 261 (291)
Q Consensus 193 ~~~~vlV~G~---g~~G~~~i~~a~~~g~~~vi~~~~~---~~~~~~a-~~~g~~~~--i~~~~~~~~~~~~~~~~~~-- 261 (291)
+++++||.|+ +++|+++++.+...|+ +|+.+.+. +++++.+ ++++.... .|..+ .++..+.+.+...
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS-DEQIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC-HHHHHHHHHHHHHHh
Confidence 4688999983 5899999988888999 78776543 3333332 33443222 23332 2334444443322
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+.+|+++++.|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 579999998874
No 441
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=93.72 E-value=0.2 Score=44.59 Aligned_cols=43 Identities=33% Similarity=0.455 Sum_probs=38.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~ 235 (291)
++++++|+|+|+.+.+++..+...|+.+++++.|+.+|.+.+.
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La 167 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELA 167 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 5799999999999999999999999879999999888866554
No 442
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=93.63 E-value=0.54 Score=40.07 Aligned_cols=95 Identities=18% Similarity=0.175 Sum_probs=60.4
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHHcCCc-------eEeCCCCCCchHHHHHHHH
Q 022819 188 VADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGVT-------EFLNPNDNNEPVQQVIKRI 259 (291)
Q Consensus 188 ~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g-~~~vi~~~~~~~~~~~a~~~g~~-------~~i~~~~~~~~~~~~~~~~ 259 (291)
.....++.+||.+|+|. |..+..+++..+ ..++++++.+++..+.+++.-.. .++..+. .+. ..
T Consensus 46 ~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~--~~~-----~~ 117 (239)
T PRK00216 46 WLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDA--EAL-----PF 117 (239)
T ss_pred HhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEeccc--ccC-----CC
Confidence 34456778999999876 778888888775 23999999999888877664211 1111111 110 01
Q ss_pred hcCCccEEEEccC------ChHHHHHHHHhhccCccc
Q 022819 260 TDGGADYSFECIG------DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 260 ~~g~~d~vld~~g------~~~~~~~~~~~l~~~G~i 290 (291)
..+.+|+|+-... ....+..+.+.|+++|++
T Consensus 118 ~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~l 154 (239)
T PRK00216 118 PDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRL 154 (239)
T ss_pred CCCCccEEEEecccccCCCHHHHHHHHHHhccCCcEE
Confidence 2236888764221 245678888999999975
No 443
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=93.59 E-value=0.63 Score=40.43 Aligned_cols=78 Identities=24% Similarity=0.302 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH-HH----cCCce-E--eCCCCCCchHHHHHHHHh--
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA-KA----FGVTE-F--LNPNDNNEPVQQVIKRIT-- 260 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~-~~~~~~~a-~~----~g~~~-~--i~~~~~~~~~~~~~~~~~-- 260 (291)
+++++||.|+ +++|.+++..+...|+ +|+.+.+ ++++.+.+ ++ .+... . .|..+ .++..+.+.+..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 5789999987 8999999999999999 7777643 44443322 22 23221 2 23332 233333333332
Q ss_pred cCCccEEEEccC
Q 022819 261 DGGADYSFECIG 272 (291)
Q Consensus 261 ~g~~d~vld~~g 272 (291)
.+.+|+++.+.|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 247899999875
No 444
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=93.56 E-value=0.98 Score=43.25 Aligned_cols=96 Identities=13% Similarity=0.120 Sum_probs=59.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHH----HHcCCceEeCCCCCCchHHHHHHHHhcCCc
Q 022819 190 DISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITDGGA 264 (291)
Q Consensus 190 ~~~~~~~vlV~G~g~~G~~~i~~a~~~g-~~~vi~~~~~~~~~~~a----~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~ 264 (291)
.++++++||-..+++=|. +.++|..++ -..+++.+.++.|++.+ +++|...+.....+...+ .+...+.|
T Consensus 110 ~~~pg~~VLD~CAAPGgK-Tt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~~~----~~~~~~~f 184 (470)
T PRK11933 110 DDNAPQRVLDMAAAPGSK-TTQIAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHFDGRVF----GAALPETF 184 (470)
T ss_pred CCCCCCEEEEeCCCccHH-HHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCchhhh----hhhchhhc
Confidence 668999998886543343 345555553 23899999999997766 457876643222211222 11222368
Q ss_pred cEEE-E--ccCC-------------------------hHHHHHHHHhhccCccc
Q 022819 265 DYSF-E--CIGD-------------------------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 265 d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~G~i 290 (291)
|.|+ | |+|. ...+..+++.|++||+|
T Consensus 185 D~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpGG~L 238 (470)
T PRK11933 185 DAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPGGTL 238 (470)
T ss_pred CeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCCcEE
Confidence 8655 4 5553 34577888999999986
No 445
>PRK12937 short chain dehydrogenase; Provisional
Probab=93.53 E-value=0.64 Score=39.66 Aligned_cols=80 Identities=14% Similarity=0.172 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HHHHcCCce-EeCCCCC-CchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCE----KAKAFGVTE-FLNPNDN-NEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~-~~~----~a~~~g~~~-~i~~~~~-~~~~~~~~~~~~--~g 262 (291)
++++++|+|+ |++|..++..+...|+ +++.+.++.+ +.+ .+++.+... .+..+-. ..+..+.+.+.. .+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5678999987 9999999999999999 7766655432 222 222333322 2222211 123333333321 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
++|+++.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (245)
T PRK12937 83 RIDVLVNNAGV 93 (245)
T ss_pred CCCEEEECCCC
Confidence 78999998884
No 446
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=93.52 E-value=0.28 Score=42.73 Aligned_cols=76 Identities=18% Similarity=0.251 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCce-EeCCCCCCchHHHHHHHHh--cCCccEEE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~-~i~~~~~~~~~~~~~~~~~--~g~~d~vl 268 (291)
+++++||.|+ |++|.++++.+...|+ +|+.+++++++.+. ..... ..|..+ ..++.+.+.+.. .+.+|+++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS-AEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4678999987 8999999999999999 88888877655321 11111 223332 133333333322 24789999
Q ss_pred EccCC
Q 022819 269 ECIGD 273 (291)
Q Consensus 269 d~~g~ 273 (291)
.+.|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 98874
No 447
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=93.52 E-value=0.26 Score=44.60 Aligned_cols=95 Identities=14% Similarity=0.127 Sum_probs=57.8
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHH---HHHc-CC---ceEeCCCCCCchHHHHHH
Q 022819 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK---AKAF-GV---TEFLNPNDNNEPVQQVIK 257 (291)
Q Consensus 185 l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~---a~~~-g~---~~~i~~~~~~~~~~~~~~ 257 (291)
+.......++++||-+|+|. |..+..++. .|+..|++++.++.-+.. ++++ +. ..++..+ +.
T Consensus 113 ~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~-~g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~~---------ie 181 (314)
T TIGR00452 113 VLPHLSPLKGRTILDVGCGS-GYHMWRMLG-HGAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPLG---------IE 181 (314)
T ss_pred HHHhcCCCCCCEEEEeccCC-cHHHHHHHH-cCCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEECC---------HH
Confidence 34444567789999999874 666666654 476689999988865432 2332 21 1122111 12
Q ss_pred HHhc-CCccEEEEcc-----CC-hHHHHHHHHhhccCccc
Q 022819 258 RITD-GGADYSFECI-----GD-TGMITTALQSCCDVRSI 290 (291)
Q Consensus 258 ~~~~-g~~d~vld~~-----g~-~~~~~~~~~~l~~~G~i 290 (291)
++.. ..||+|+-.- .. ...+..+.+.|++||+|
T Consensus 182 ~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpGG~L 221 (314)
T TIGR00452 182 QLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIKGEL 221 (314)
T ss_pred HCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCCCEE
Confidence 2222 2689887531 12 36789999999999986
No 448
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=93.51 E-value=0.21 Score=42.73 Aligned_cols=97 Identities=15% Similarity=0.206 Sum_probs=60.6
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHc----CCce--EeCCCCCCchHHHHHHH
Q 022819 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAF----GVTE--FLNPNDNNEPVQQVIKR 258 (291)
Q Consensus 186 ~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~~----g~~~--~i~~~~~~~~~~~~~~~ 258 (291)
.....++++++||-+|+| .|..+..+++..+. .++++++.+++..+.+++. +.+. ++..+. .++ .
T Consensus 38 l~~l~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~--~~~-----~ 109 (231)
T TIGR02752 38 MKRMNVQAGTSALDVCCG-TADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNA--MEL-----P 109 (231)
T ss_pred HHhcCCCCCCEEEEeCCC-cCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEech--hcC-----C
Confidence 344567889999999886 45566777776542 2899999999888777642 2221 121111 110 1
Q ss_pred HhcCCccEEEEccC-----C-hHHHHHHHHhhccCccc
Q 022819 259 ITDGGADYSFECIG-----D-TGMITTALQSCCDVRSI 290 (291)
Q Consensus 259 ~~~g~~d~vld~~g-----~-~~~~~~~~~~l~~~G~i 290 (291)
+..+.+|+|+-+.. . ...++.+.+.|++||++
T Consensus 110 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l 147 (231)
T TIGR02752 110 FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKV 147 (231)
T ss_pred CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEE
Confidence 12237898874321 1 34577888999999976
No 449
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.50 E-value=0.45 Score=45.07 Aligned_cols=72 Identities=18% Similarity=0.248 Sum_probs=48.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh----hHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEE
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE----KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF 268 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~----~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vl 268 (291)
.+++++|+|.|.+|++++.++...|+ +|++.+.+.. ..+.+++.|.......+. .+. + ..++|+|+
T Consensus 4 ~~k~v~v~G~g~~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~---~----~~~~d~vV 73 (447)
T PRK02472 4 QNKKVLVLGLAKSGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIKVICGSHP--LEL---L----DEDFDLMV 73 (447)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCEEEeCCCC--HHH---h----cCcCCEEE
Confidence 46789999998899999999999999 8999886542 223445566644332211 111 1 11478888
Q ss_pred EccCCh
Q 022819 269 ECIGDT 274 (291)
Q Consensus 269 d~~g~~ 274 (291)
.+.|-+
T Consensus 74 ~s~gi~ 79 (447)
T PRK02472 74 KNPGIP 79 (447)
T ss_pred ECCCCC
Confidence 887653
No 450
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=93.50 E-value=0.86 Score=38.65 Aligned_cols=94 Identities=19% Similarity=0.208 Sum_probs=55.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHH-HhcCCccEEE
Q 022819 191 ISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR-ITDGGADYSF 268 (291)
Q Consensus 191 ~~~~~~vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~-~~~g~~d~vl 268 (291)
++++++||=+|+|+ |..+..+++..+. .+|+++|.++-. .+.-..++.-+-.+....+.+.+ +..+.+|+|+
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~-----~~~~v~~i~~D~~~~~~~~~i~~~~~~~~~D~V~ 122 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD-----PIVGVDFLQGDFRDELVLKALLERVGDSKVQVVM 122 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc-----CCCCcEEEecCCCChHHHHHHHHHhCCCCCCEEe
Confidence 57888998898752 4455556665542 389999987621 11111233332212333344444 3334899998
Q ss_pred Ecc-----CC------------hHHHHHHHHhhccCccc
Q 022819 269 ECI-----GD------------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 269 d~~-----g~------------~~~~~~~~~~l~~~G~i 290 (291)
... |. ...++.+.+.|++||++
T Consensus 123 S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG~~ 161 (209)
T PRK11188 123 SDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSF 161 (209)
T ss_pred cCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCEE
Confidence 643 21 23578888999999976
No 451
>PRK12335 tellurite resistance protein TehB; Provisional
Probab=93.49 E-value=0.13 Score=45.82 Aligned_cols=87 Identities=14% Similarity=0.087 Sum_probs=54.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCce-EeCCCCCCchHHHHHHHHhcCCccEE
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTE-FLNPNDNNEPVQQVIKRITDGGADYS 267 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~----g~~~-~i~~~~~~~~~~~~~~~~~~g~~d~v 267 (291)
++.+||-+|+| .|..++.+++ .|. +|+++|.+++.++.+++. +... +...+ .... . ..+.+|+|
T Consensus 120 ~~~~vLDlGcG-~G~~~~~la~-~g~-~V~avD~s~~ai~~~~~~~~~~~l~v~~~~~D-----~~~~--~-~~~~fD~I 188 (287)
T PRK12335 120 KPGKALDLGCG-QGRNSLYLAL-LGF-DVTAVDINQQSLENLQEIAEKENLNIRTGLYD-----INSA--S-IQEEYDFI 188 (287)
T ss_pred CCCCEEEeCCC-CCHHHHHHHH-CCC-EEEEEECCHHHHHHHHHHHHHcCCceEEEEec-----hhcc--c-ccCCccEE
Confidence 44589999886 4556666666 477 999999999887776542 3321 11111 1000 0 12479998
Q ss_pred EEccC--------ChHHHHHHHHhhccCccc
Q 022819 268 FECIG--------DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 268 ld~~g--------~~~~~~~~~~~l~~~G~i 290 (291)
+.+.- .+..+..+.+.|++||.+
T Consensus 189 ~~~~vl~~l~~~~~~~~l~~~~~~LkpgG~~ 219 (287)
T PRK12335 189 LSTVVLMFLNRERIPAIIKNMQEHTNPGGYN 219 (287)
T ss_pred EEcchhhhCCHHHHHHHHHHHHHhcCCCcEE
Confidence 86531 134678888899999973
No 452
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=93.48 E-value=0.57 Score=40.27 Aligned_cols=77 Identities=19% Similarity=0.252 Sum_probs=48.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCce-Ee--CCCCCCchHHHHHHHHh--cCCc
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGA 264 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a----~~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g~~ 264 (291)
++++|.|+ |.+|...++.+...|+ +|+.+.+++++.+.+ ++.+... .+ |..+ .....+.+.+.. .+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCC
Confidence 46889987 9999999999989999 888888876654332 2233322 22 3322 133333333332 2368
Q ss_pred cEEEEccCC
Q 022819 265 DYSFECIGD 273 (291)
Q Consensus 265 d~vld~~g~ 273 (291)
|+++.+.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999998875
No 453
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=93.47 E-value=0.41 Score=42.04 Aligned_cols=73 Identities=15% Similarity=0.132 Sum_probs=50.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcC-CccEEEEccCC
Q 022819 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD 273 (291)
Q Consensus 196 ~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g-~~d~vld~~g~ 273 (291)
+|||+|+.+-|..++..+...|. +|+++.+++.+.+.+.+.|...++.-..+..+ +.++... ++|+|+|++-.
T Consensus 2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~----l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGALDPQE----LREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEECCCCHHH----HHHHHHhcCCCEEEEcCCH
Confidence 68999884459999888888897 88888888888777777665554422221223 3333333 89999998775
No 454
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=93.46 E-value=0.62 Score=41.52 Aligned_cols=43 Identities=23% Similarity=0.345 Sum_probs=36.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 022819 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (291)
Q Consensus 196 ~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~ 239 (291)
+|.|+|.|.+|...+..+...|. +|+++++++++.+.+.+.|.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 43 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA 43 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 36788999999988888888898 89999999999888877664
No 455
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.46 E-value=0.86 Score=41.04 Aligned_cols=78 Identities=24% Similarity=0.285 Sum_probs=50.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHH-HHcCC---c-eE--eCCCCCCchHHHHHHHHh--cC
Q 022819 194 GSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKA-KAFGV---T-EF--LNPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 194 ~~~vlV~G~-g~~G~~~i~~a~~~g-~~~vi~~~~~~~~~~~a-~~~g~---~-~~--i~~~~~~~~~~~~~~~~~--~g 262 (291)
+++++|.|+ +++|.+++..+...| . +|+.+.+++++.+.+ +++.. . .. .|..+ ..+....+.+.. .+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 568999987 899999998888889 7 888888888766543 33321 1 12 23322 123333333332 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
++|+++.+.|.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 79999998874
No 456
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=93.43 E-value=0.66 Score=43.91 Aligned_cols=73 Identities=19% Similarity=0.379 Sum_probs=52.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccCC
Q 022819 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (291)
Q Consensus 196 ~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~-~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~ 273 (291)
+|+|+|+|.+|...++.+...|. .++++++++++.+.+++ .+...+.- +. .-...+.+..-..+|.++-+++.
T Consensus 2 ~viIiG~G~ig~~~a~~L~~~g~-~v~vid~~~~~~~~~~~~~~~~~~~g-d~---~~~~~l~~~~~~~a~~vi~~~~~ 75 (453)
T PRK09496 2 KIIIVGAGQVGYTLAENLSGENN-DVTVIDTDEERLRRLQDRLDVRTVVG-NG---SSPDVLREAGAEDADLLIAVTDS 75 (453)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhhcCEEEEEe-CC---CCHHHHHHcCCCcCCEEEEecCC
Confidence 58889999999999999999998 88999999998888876 55443321 11 11223444323378888888876
No 457
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.42 E-value=0.73 Score=39.66 Aligned_cols=77 Identities=19% Similarity=0.295 Sum_probs=47.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HHHHcCCce-Ee--CCCCCCchHHHHHHHHhc--CC
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCE----KAKAFGVTE-FL--NPNDNNEPVQQVIKRITD--GG 263 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~-~~~----~a~~~g~~~-~i--~~~~~~~~~~~~~~~~~~--g~ 263 (291)
+++||.|+ |++|..++..+...|+ +|+.++++.+ +.+ .++..+... ++ |..+ ..+..+.+.+... +.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 57899987 9999999999999999 8888876532 221 222233222 22 3322 2333333333322 37
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++.+.|.
T Consensus 81 id~vi~~ag~ 90 (256)
T PRK12745 81 IDCLVNNAGV 90 (256)
T ss_pred CCEEEECCcc
Confidence 8999998874
No 458
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=93.39 E-value=0.49 Score=47.49 Aligned_cols=79 Identities=24% Similarity=0.371 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-H----cCCce--E--eCCCCCCchHHHHHHHHh--
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A----FGVTE--F--LNPNDNNEPVQQVIKRIT-- 260 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~-~----~g~~~--~--i~~~~~~~~~~~~~~~~~-- 260 (291)
.++++||.|+ |++|.++++.+...|+ +|+.++++.++.+.+. + .+... . .|..+ ..++.+.+.+..
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence 4688999987 9999999999999999 9999988877655432 2 23211 2 23322 233333333332
Q ss_pred cCCccEEEEccCC
Q 022819 261 DGGADYSFECIGD 273 (291)
Q Consensus 261 ~g~~d~vld~~g~ 273 (291)
.+++|+++.+.|.
T Consensus 491 ~g~iDilV~nAG~ 503 (676)
T TIGR02632 491 YGGVDIVVNNAGI 503 (676)
T ss_pred cCCCcEEEECCCC
Confidence 2479999999884
No 459
>PRK09135 pteridine reductase; Provisional
Probab=93.38 E-value=0.75 Score=39.25 Aligned_cols=79 Identities=14% Similarity=0.155 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHH----HHcCC--ceE--eCCCCCCchHHHHHHHHh--
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCEKA----KAFGV--TEF--LNPNDNNEPVQQVIKRIT-- 260 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~-~~~~~a----~~~g~--~~~--i~~~~~~~~~~~~~~~~~-- 260 (291)
.++++||.|+ |.+|..++..+...|+ +|+.++++. ++.+.+ +.... ... .|..+ .......+++..
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD-PDALPELVAACVAA 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4578999987 9999999988888999 888888753 333322 12211 112 23332 122333333221
Q ss_pred cCCccEEEEccCC
Q 022819 261 DGGADYSFECIGD 273 (291)
Q Consensus 261 ~g~~d~vld~~g~ 273 (291)
.+.+|++|.+.|.
T Consensus 83 ~~~~d~vi~~ag~ 95 (249)
T PRK09135 83 FGRLDALVNNASS 95 (249)
T ss_pred cCCCCEEEECCCC
Confidence 2368999999884
No 460
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.38 E-value=0.56 Score=41.58 Aligned_cols=43 Identities=30% Similarity=0.546 Sum_probs=37.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 022819 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (291)
Q Consensus 196 ~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~ 239 (291)
+|.|+|.|.+|...+..++..|. +|+++++++++.+.+.+.|.
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~ 44 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGL 44 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCC
Confidence 57889999999999888888898 89999999998888877764
No 461
>PRK05855 short chain dehydrogenase; Validated
Probab=93.35 E-value=0.5 Score=45.89 Aligned_cols=79 Identities=20% Similarity=0.337 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCce-E--eCCCCCCchHHHHHHHHh--cC
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~----~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g 262 (291)
.+.++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+. +.|... . .|..+ .....+.+.+.. .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAEHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4578999987 9999999999889999 8999999887765432 234322 2 23332 123333333332 24
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
.+|+++++.|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 78999999885
No 462
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.35 E-value=0.59 Score=41.65 Aligned_cols=51 Identities=16% Similarity=0.237 Sum_probs=36.5
Q ss_pred CCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHHcCCceEeCC
Q 022819 192 SKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAFGVTEFLNP 245 (291)
Q Consensus 192 ~~~~~vlV~G~g~-~G~~~i~~a~~~g~~~vi~~~~~~~~~~-~a~~~g~~~~i~~ 245 (291)
-.|++++|+|.|. +|.-++.++...|+ +|+.+.+....+. .++ .++.++..
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~~l~~~~~--~ADIVIsA 208 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSKDMASYLK--DADVIVSA 208 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCchhHHHHHh--hCCEEEEC
Confidence 3789999999865 99999999999999 8888866443332 222 34555544
No 463
>PRK06701 short chain dehydrogenase; Provisional
Probab=93.34 E-value=0.6 Score=41.51 Aligned_cols=80 Identities=20% Similarity=0.203 Sum_probs=48.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HH----HHHHcCCce-Ee--CCCCCCchHHHHHHHHh--
Q 022819 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CE----KAKAFGVTE-FL--NPNDNNEPVQQVIKRIT-- 260 (291)
Q Consensus 192 ~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~-~~----~a~~~g~~~-~i--~~~~~~~~~~~~~~~~~-- 260 (291)
-+++++||.|+ |.+|..++..+...|+ +|+.+.++.++ .+ .++..+... ++ |..+ ...+.+.+.+..
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~~~ 121 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETVRE 121 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 35688999987 8999999988888999 88888776432 21 222234322 22 3322 122333333321
Q ss_pred cCCccEEEEccCC
Q 022819 261 DGGADYSFECIGD 273 (291)
Q Consensus 261 ~g~~d~vld~~g~ 273 (291)
.+.+|+++.+.|.
T Consensus 122 ~~~iD~lI~~Ag~ 134 (290)
T PRK06701 122 LGRLDILVNNAAF 134 (290)
T ss_pred cCCCCEEEECCcc
Confidence 1478999998874
No 464
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=93.31 E-value=0.49 Score=35.27 Aligned_cols=80 Identities=20% Similarity=0.277 Sum_probs=49.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEccC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g 272 (291)
++.+|||+|+|.+|..-++.+...|+ +|.++.... +..+ +.-.... ..+ .+. -.++++|+-+++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-----~~~----~~~-l~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR-----REF----EED-LDGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE-----SS-----GGG-CTTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh-----hhH----HHH-HhhheEEEecCC
Confidence 57889999999999999999999999 888887664 1112 1111221 112 110 126899999998
Q ss_pred ChHHHHHHHHhhccCc
Q 022819 273 DTGMITTALQSCCDVR 288 (291)
Q Consensus 273 ~~~~~~~~~~~l~~~G 288 (291)
.+..-+...+.++..|
T Consensus 70 d~~~n~~i~~~a~~~~ 85 (103)
T PF13241_consen 70 DPELNEAIYADARARG 85 (103)
T ss_dssp -HHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhhCC
Confidence 8665555555555444
No 465
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=93.30 E-value=0.18 Score=48.33 Aligned_cols=95 Identities=16% Similarity=0.150 Sum_probs=61.7
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc--CCc---eEeCCCCCCchHHHHHHHHhc
Q 022819 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF--GVT---EFLNPNDNNEPVQQVIKRITD 261 (291)
Q Consensus 187 ~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~--g~~---~~i~~~~~~~~~~~~~~~~~~ 261 (291)
+...++++++||-+|+|. |..++.+++..++ ++++++.+++.++.+++. +.. .++..+-... .+..
T Consensus 260 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~d~~~~-------~~~~ 330 (475)
T PLN02336 260 DKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEVADCTKK-------TYPD 330 (475)
T ss_pred HhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEEcCcccC-------CCCC
Confidence 334567888999998863 5566778887788 999999999888887642 211 1111111000 1112
Q ss_pred CCccEEEEccC------ChHHHHHHHHhhccCccc
Q 022819 262 GGADYSFECIG------DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 262 g~~d~vld~~g------~~~~~~~~~~~l~~~G~i 290 (291)
+.||+|+..-. ....+..+.+.|++||+|
T Consensus 331 ~~fD~I~s~~~l~h~~d~~~~l~~~~r~LkpgG~l 365 (475)
T PLN02336 331 NSFDVIYSRDTILHIQDKPALFRSFFKWLKPGGKV 365 (475)
T ss_pred CCEEEEEECCcccccCCHHHHHHHHHHHcCCCeEE
Confidence 36898886311 145788999999999986
No 466
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=93.26 E-value=1.9 Score=38.58 Aligned_cols=61 Identities=26% Similarity=0.333 Sum_probs=46.7
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHHcCCceEeCCC
Q 022819 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD--TNPEKCEKAKAFGVTEFLNPN 246 (291)
Q Consensus 186 ~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~--~~~~~~~~a~~~g~~~~i~~~ 246 (291)
.+...+++|.+|+=--+|..|.+.+.+|+.+|.+.++++. .+.+|.++++.+|+..+....
T Consensus 54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 3456689999665545699999999999999995555553 367899999999998766554
No 467
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.25 E-value=0.88 Score=38.75 Aligned_cols=78 Identities=22% Similarity=0.378 Sum_probs=48.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHHH----HcCCce-Ee--CCCCCCchHHHHHHHHhc--C
Q 022819 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRITD--G 262 (291)
Q Consensus 194 ~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~-~~~~~~~~~a~----~~g~~~-~i--~~~~~~~~~~~~~~~~~~--g 262 (291)
++++||.|+ |.+|..++..+...|+ +++.+ +++.++.+.+. ..+... ++ |..+ ..++.+.+.+... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 468999987 9999999988888899 78887 88776654332 222212 22 3322 1223333332211 3
Q ss_pred CccEEEEccCC
Q 022819 263 GADYSFECIGD 273 (291)
Q Consensus 263 ~~d~vld~~g~ 273 (291)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 68999998874
No 468
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=93.22 E-value=0.59 Score=44.45 Aligned_cols=97 Identities=15% Similarity=0.160 Sum_probs=58.8
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHH----cCCce--EeCCCCCCchHHHHHHHH
Q 022819 187 NVADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRI 259 (291)
Q Consensus 187 ~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~-g~~~vi~~~~~~~~~~~a~~----~g~~~--~i~~~~~~~~~~~~~~~~ 259 (291)
...+++++++||-.|+| .|..++.+++.+ +..+|++++.++++.+.+++ .|... ++..+. .++. ..+
T Consensus 244 ~~l~~~~g~~VLDlgaG-~G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~D~--~~~~---~~~ 317 (444)
T PRK14902 244 PALDPKGGDTVLDACAA-PGGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIETKALDA--RKVH---EKF 317 (444)
T ss_pred HHhCCCCCCEEEEeCCC-CCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCCc--cccc---chh
Confidence 34567888999888764 244445556554 22389999999998877653 56543 222211 1111 111
Q ss_pred hcCCccEEEE---ccCC-------------------------hHHHHHHHHhhccCccc
Q 022819 260 TDGGADYSFE---CIGD-------------------------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 260 ~~g~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~i 290 (291)
.+.||.|+- |+|. ...+..+++.|++||++
T Consensus 318 -~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~l 375 (444)
T PRK14902 318 -AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGIL 375 (444)
T ss_pred -cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEE
Confidence 146897764 3321 13578889999999986
No 469
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=93.21 E-value=0.73 Score=40.99 Aligned_cols=46 Identities=37% Similarity=0.473 Sum_probs=36.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCe-EEEEcCChhhHHHHHHcCC
Q 022819 194 GSTVVIFGLGTVGLSVAQGAKARGASR-IIGVDTNPEKCEKAKAFGV 239 (291)
Q Consensus 194 ~~~vlV~G~g~~G~~~i~~a~~~g~~~-vi~~~~~~~~~~~a~~~g~ 239 (291)
..+|+|.|.|.+|......++..|... ++..+.+.+++..+.++|.
T Consensus 3 ~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv 49 (279)
T COG0287 3 SMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGV 49 (279)
T ss_pred CcEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCc
Confidence 357888899999999999999999833 5677777777777777775
No 470
>PRK13984 putative oxidoreductase; Provisional
Probab=93.18 E-value=0.56 Score=46.36 Aligned_cols=78 Identities=23% Similarity=0.227 Sum_probs=53.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHHHHcCCceEeCCCCCC
Q 022819 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP---------------------EKCEKAKAFGVTEFLNPNDNN 249 (291)
Q Consensus 191 ~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~---------------------~~~~~a~~~g~~~~i~~~~~~ 249 (291)
.+++++|+|+|+|+.|+.++..++.+|. .|++++..+ ...+.++++|+...++..-..
T Consensus 280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 358 (604)
T PRK13984 280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK 358 (604)
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence 4578889999999999999999999998 788876543 124566777876555432111
Q ss_pred chHHHHHHHHhcCCccEEEEccCC
Q 022819 250 EPVQQVIKRITDGGADYSFECIGD 273 (291)
Q Consensus 250 ~~~~~~~~~~~~g~~d~vld~~g~ 273 (291)
+...+.++ ..+|.+|-++|.
T Consensus 359 ~~~~~~~~----~~yD~vilAtGa 378 (604)
T PRK13984 359 DIPLEELR----EKHDAVFLSTGF 378 (604)
T ss_pred cCCHHHHH----hcCCEEEEEcCc
Confidence 11112222 268999999985
No 471
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=93.15 E-value=0.88 Score=41.28 Aligned_cols=83 Identities=20% Similarity=0.255 Sum_probs=55.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEEEEcc
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~vld~~ 271 (291)
=.+++|.|+|-|.+|.+.++.++..|. +|++..+.....+.++..|+. +. ++.+.++ ..|+|+-++
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~-------sl~Eaak-----~ADVV~llL 79 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM-------SVSEAVR-----TAQVVQMLL 79 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC-------CHHHHHh-----cCCEEEEeC
Confidence 368899999999999999999999999 887776655555666666652 11 1222222 478888887
Q ss_pred CChHH---H-HHHHHhhccCc
Q 022819 272 GDTGM---I-TTALQSCCDVR 288 (291)
Q Consensus 272 g~~~~---~-~~~~~~l~~~G 288 (291)
..+.. + ...+..|+++.
T Consensus 80 Pd~~t~~V~~~eil~~MK~Ga 100 (335)
T PRK13403 80 PDEQQAHVYKAEVEENLREGQ 100 (335)
T ss_pred CChHHHHHHHHHHHhcCCCCC
Confidence 75322 2 23445555554
No 472
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=93.14 E-value=0.2 Score=35.75 Aligned_cols=83 Identities=23% Similarity=0.207 Sum_probs=52.4
Q ss_pred EEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCce---EeCCCCCCchHHHHHHHHhcCCccEEEEccCC--
Q 022819 199 IFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE---FLNPNDNNEPVQQVIKRITDGGADYSFECIGD-- 273 (291)
Q Consensus 199 V~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~---~i~~~~~~~~~~~~~~~~~~g~~d~vld~~g~-- 273 (291)
-+|+| .|..+..+++..+. ++++++.+++.++.+++..... ++..+. .++ .+.++.||+|+....-
T Consensus 2 diG~G-~G~~~~~l~~~~~~-~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~--~~l-----~~~~~sfD~v~~~~~~~~ 72 (95)
T PF08241_consen 2 DIGCG-TGRFAAALAKRGGA-SVTGIDISEEMLEQARKRLKNEGVSFRQGDA--EDL-----PFPDNSFDVVFSNSVLHH 72 (95)
T ss_dssp EET-T-TSHHHHHHHHTTTC-EEEEEES-HHHHHHHHHHTTTSTEEEEESBT--TSS-----SS-TT-EEEEEEESHGGG
T ss_pred EecCc-CCHHHHHHHhccCC-EEEEEeCCHHHHHHHHhcccccCchheeehH--HhC-----ccccccccccccccceee
Confidence 35665 67888888888444 9999999999999888754322 222221 111 1223478888763221
Q ss_pred ----hHHHHHHHHhhccCccc
Q 022819 274 ----TGMITTALQSCCDVRSI 290 (291)
Q Consensus 274 ----~~~~~~~~~~l~~~G~i 290 (291)
...++++.+.|+++|++
T Consensus 73 ~~~~~~~l~e~~rvLk~gG~l 93 (95)
T PF08241_consen 73 LEDPEAALREIYRVLKPGGRL 93 (95)
T ss_dssp SSHHHHHHHHHHHHEEEEEEE
T ss_pred ccCHHHHHHHHHHHcCcCeEE
Confidence 35689999999999976
No 473
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=93.10 E-value=0.68 Score=41.62 Aligned_cols=39 Identities=21% Similarity=0.260 Sum_probs=31.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 022819 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC 231 (291)
Q Consensus 192 ~~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~ 231 (291)
..++++||+|+ |.+|..++..+...|. +|+++.++.++.
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~-~V~~~~r~~~~~ 42 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKDR 42 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCCcch
Confidence 35789999987 9999999999999998 887776665543
No 474
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]
Probab=93.09 E-value=0.65 Score=39.54 Aligned_cols=96 Identities=16% Similarity=0.139 Sum_probs=67.5
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhcC-Cc
Q 022819 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GA 264 (291)
Q Consensus 186 ~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g-~~ 264 (291)
.....+....+|+-+|+| -|.++-.+++......|.++|++++-++.+++...+..... . .+..+... ..
T Consensus 23 la~Vp~~~~~~v~DLGCG-pGnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f~~----a----Dl~~w~p~~~~ 93 (257)
T COG4106 23 LARVPLERPRRVVDLGCG-PGNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATFEE----A----DLRTWKPEQPT 93 (257)
T ss_pred HhhCCccccceeeecCCC-CCHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCceec----c----cHhhcCCCCcc
Confidence 334445677888888998 48888999998865599999999999999987655432221 1 24444444 56
Q ss_pred cEEEEccC------ChHHHHHHHHhhccCccc
Q 022819 265 DYSFECIG------DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 265 d~vld~~g------~~~~~~~~~~~l~~~G~i 290 (291)
|++|-+.- .+..+..++..|++||.+
T Consensus 94 dllfaNAvlqWlpdH~~ll~rL~~~L~Pgg~L 125 (257)
T COG4106 94 DLLFANAVLQWLPDHPELLPRLVSQLAPGGVL 125 (257)
T ss_pred chhhhhhhhhhccccHHHHHHHHHhhCCCceE
Confidence 66664322 256789999999999975
No 475
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.05 E-value=1.4 Score=40.10 Aligned_cols=39 Identities=23% Similarity=0.319 Sum_probs=34.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022819 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (291)
Q Consensus 195 ~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a 234 (291)
++|.|+|+|.+|...++.+...|. .|+..+.+++..+.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence 679999999999999999999999 999999988765543
No 476
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=93.04 E-value=0.35 Score=43.57 Aligned_cols=85 Identities=13% Similarity=0.052 Sum_probs=50.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCceEeCCCCCCchHHH-HHHHHhcCCccEEEEccCC
Q 022819 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTEFLNPNDNNEPVQQ-VIKRITDGGADYSFECIGD 273 (291)
Q Consensus 196 ~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~-g~~~~i~~~~~~~~~~~-~~~~~~~g~~d~vld~~g~ 273 (291)
+|+|+|+|++|....-.+...|. .|..+++..++++..++- |.. +..... ...+.. .......+.+|+||-|+-.
T Consensus 4 ~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~-~~~~~~~~~~~~~~~~~D~viv~vK~ 80 (305)
T PRK05708 4 TWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ-ASLYAIPAETADAAEPIHRLLLACKA 80 (305)
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc-ceeeccCCCCcccccccCEEEEECCH
Confidence 68999999999877777777788 788888887787777653 332 211111 010000 0000011368999998877
Q ss_pred hHHHHHHHHhh
Q 022819 274 TGMITTALQSC 284 (291)
Q Consensus 274 ~~~~~~~~~~l 284 (291)
.+ ...+++.+
T Consensus 81 ~~-~~~al~~l 90 (305)
T PRK05708 81 YD-AEPAVASL 90 (305)
T ss_pred Hh-HHHHHHHH
Confidence 43 34444443
No 477
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=93.04 E-value=0.84 Score=38.81 Aligned_cols=77 Identities=18% Similarity=0.229 Sum_probs=46.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH-HHHc---CCce-E--eCCCCCCchHHHHHHHHh--cCC
Q 022819 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEK-AKAF---GVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (291)
Q Consensus 195 ~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~-~~~~~~~-a~~~---g~~~-~--i~~~~~~~~~~~~~~~~~--~g~ 263 (291)
+++||+|+ |.+|..++..+...|+ +++++.+ ++++.+. ..++ +... . .|..+ ..++.+.+.+.. .+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS-FESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 46889987 9999999999999999 7887766 4443322 2222 2211 2 23322 223333333322 247
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|++|.+.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 8999999874
No 478
>TIGR00091 tRNA (guanine-N(7)-)-methyltransferase. In E. coli, this protein flanks the DNA repair protein MutY, also called micA.
Probab=93.01 E-value=1.2 Score=37.27 Aligned_cols=92 Identities=14% Similarity=0.180 Sum_probs=59.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCce--EeCCCCCCchHHHHHHHHhcC-Ccc
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRITDG-GAD 265 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~----~g~~~--~i~~~~~~~~~~~~~~~~~~g-~~d 265 (291)
....+|-+|+|. |..+..+|+......+++++.+++.++.+++ .+... ++. .+..+....+... .+|
T Consensus 16 ~~~~ilDiGcG~-G~~~~~la~~~p~~~v~gvD~~~~~l~~a~~~~~~~~l~ni~~i~-----~d~~~~~~~~~~~~~~d 89 (194)
T TIGR00091 16 KAPLHLEIGCGK-GRFLIDMAKQNPDKNFLGIEIHTPIVLAANNKANKLGLKNLHVLC-----GDANELLDKFFPDGSLS 89 (194)
T ss_pred CCceEEEeCCCc-cHHHHHHHHhCCCCCEEEEEeeHHHHHHHHHHHHHhCCCCEEEEc-----cCHHHHHHhhCCCCcee
Confidence 445677788874 8888888887643489999999987776643 23322 222 2222233333333 688
Q ss_pred EEEEccCC--------------hHHHHHHHHhhccCccc
Q 022819 266 YSFECIGD--------------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 266 ~vld~~g~--------------~~~~~~~~~~l~~~G~i 290 (291)
.++-.... +..++.+.+.|++||+|
T Consensus 90 ~v~~~~pdpw~k~~h~~~r~~~~~~l~~~~r~LkpgG~l 128 (194)
T TIGR00091 90 KVFLNFPDPWPKKRHNKRRITQPHFLKEYANVLKKGGVI 128 (194)
T ss_pred EEEEECCCcCCCCCccccccCCHHHHHHHHHHhCCCCEE
Confidence 77654432 35788999999999986
No 479
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=93.00 E-value=0.32 Score=40.29 Aligned_cols=40 Identities=30% Similarity=0.444 Sum_probs=33.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 022819 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (291)
Q Consensus 196 ~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~ 236 (291)
+|.|+|+|.+|...++++...|. .|..++.+++.++.+++
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~~~ 40 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERARK 40 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhhhh
Confidence 57899999999999999999999 99999999988766543
No 480
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=93.00 E-value=0.42 Score=43.77 Aligned_cols=92 Identities=18% Similarity=0.067 Sum_probs=58.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHH--hcCCccEEEE
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI--TDGGADYSFE 269 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~~~~~~~~~~~~--~~g~~d~vld 269 (291)
.++.+||-+|+|. |..+..+++..+..+++++|.+++-++.+++.....-+.... .+ +.++ ..+.+|+|+.
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~--gD----~e~lp~~~~sFDvVIs 184 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE--GD----AEDLPFPTDYADRYVS 184 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe--cc----HHhCCCCCCceeEEEE
Confidence 4678899998864 667777777765448999999998888877642111010100 11 1111 1236898876
Q ss_pred ccC------ChHHHHHHHHhhccCccc
Q 022819 270 CIG------DTGMITTALQSCCDVRSI 290 (291)
Q Consensus 270 ~~g------~~~~~~~~~~~l~~~G~i 290 (291)
+-. ....++++.+.|++||++
T Consensus 185 ~~~L~~~~d~~~~L~e~~rvLkPGG~L 211 (340)
T PLN02490 185 AGSIEYWPDPQRGIKEAYRVLKIGGKA 211 (340)
T ss_pred cChhhhCCCHHHHHHHHHHhcCCCcEE
Confidence 321 135678899999999985
No 481
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=92.92 E-value=0.63 Score=39.95 Aligned_cols=74 Identities=27% Similarity=0.324 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCce-Ee--CCCCCCchHHHHHHHHhc--CCccE
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FL--NPNDNNEPVQQVIKRITD--GGADY 266 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~-~i--~~~~~~~~~~~~~~~~~~--g~~d~ 266 (291)
+++++||.|+ |.+|...+..+...|. +|+.++++. .+..+... .+ |..+ .+.+.+.+.+... +.+|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4678999987 8999999999888998 899988765 22222211 22 3322 1333333333222 36899
Q ss_pred EEEccCC
Q 022819 267 SFECIGD 273 (291)
Q Consensus 267 vld~~g~ 273 (291)
++.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9998875
No 482
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=92.88 E-value=1.2 Score=38.66 Aligned_cols=79 Identities=20% Similarity=0.159 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhhHHH----HHHcCCce-E--eCCCCCCchHHHHHHHHh--c
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-PEKCEK----AKAFGVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~-~~~~~~----a~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~ 261 (291)
+++++||.|+ |++|..+++.+...|+ +++.+.++ +++.+. +++.+... . .|..+ .....+.+.+.. .
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 5789999987 8999999999999998 77666553 333222 22233322 2 24332 123333333322 2
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+.+|+++.+.|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 478999998884
No 483
>PRK13243 glyoxylate reductase; Reviewed
Probab=92.80 E-value=0.7 Score=42.23 Aligned_cols=37 Identities=35% Similarity=0.524 Sum_probs=32.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK 230 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~ 230 (291)
.+++|.|+|.|.+|...++.++.+|+ +|++.+++.+.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 57899999999999999999999999 89999876543
No 484
>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Probab=92.80 E-value=0.59 Score=33.17 Aligned_cols=86 Identities=22% Similarity=0.191 Sum_probs=51.5
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH---cCC-c--eEeCCCCCCchHHHHHHHHhcCCccEEEEc
Q 022819 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGV-T--EFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (291)
Q Consensus 197 vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~---~g~-~--~~i~~~~~~~~~~~~~~~~~~g~~d~vld~ 270 (291)
++-+|+|. |..+.++++... .++++++.+++..+.+++ ... . .++. .++.+... ...+.+|+++..
T Consensus 2 ildig~G~-G~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~d~i~~~ 73 (107)
T cd02440 2 VLDLGCGT-GALALALASGPG-ARVTGVDISPVALELARKAAAALLADNVEVLK-----GDAEELPP-EADESFDVIISD 73 (107)
T ss_pred eEEEcCCc-cHHHHHHhcCCC-CEEEEEeCCHHHHHHHHHHHhcccccceEEEE-----cChhhhcc-ccCCceEEEEEc
Confidence 55667764 666667776334 499999999888777762 111 1 1221 12222211 122478988875
Q ss_pred cCC-------hHHHHHHHHhhccCccc
Q 022819 271 IGD-------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 271 ~g~-------~~~~~~~~~~l~~~G~i 290 (291)
... ...++...+.++++|.+
T Consensus 74 ~~~~~~~~~~~~~l~~~~~~l~~~g~~ 100 (107)
T cd02440 74 PPLHHLVEDLARFLEEARRLLKPGGVL 100 (107)
T ss_pred cceeehhhHHHHHHHHHHHHcCCCCEE
Confidence 442 45577788889998875
No 485
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.80 E-value=1.2 Score=38.69 Aligned_cols=79 Identities=22% Similarity=0.360 Sum_probs=48.9
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHH-HHHcCCc-eE--eCCCCCCchHHHHHHHHh--c
Q 022819 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP--EKCEK-AKAFGVT-EF--LNPNDNNEPVQQVIKRIT--D 261 (291)
Q Consensus 193 ~~~~vlV~G~---g~~G~~~i~~a~~~g~~~vi~~~~~~--~~~~~-a~~~g~~-~~--i~~~~~~~~~~~~~~~~~--~ 261 (291)
++++++|.|+ +++|.++++.+...|+ +|+.++++. +..+. .++++.. .. .|..+ ..+..+.+.+.. .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 4678999985 6999999998888999 888887653 33333 3334321 12 23332 123333333322 2
Q ss_pred CCccEEEEccCC
Q 022819 262 GGADYSFECIGD 273 (291)
Q Consensus 262 g~~d~vld~~g~ 273 (291)
+.+|+++++.|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 479999998875
No 486
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=92.78 E-value=0.89 Score=40.86 Aligned_cols=38 Identities=16% Similarity=0.161 Sum_probs=31.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC 231 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~~~~~~ 231 (291)
.+++|||.|+ |.+|..++..+...|. +|+++.++.++.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~ 42 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDR 42 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcch
Confidence 4689999987 9999999998888898 888776765543
No 487
>PRK03612 spermidine synthase; Provisional
Probab=92.77 E-value=0.8 Score=44.52 Aligned_cols=97 Identities=15% Similarity=0.175 Sum_probs=59.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC-Cce----EeCCCC---CCchHHHHHHHHhcCC
Q 022819 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG-VTE----FLNPND---NNEPVQQVIKRITDGG 263 (291)
Q Consensus 192 ~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g-~~~----~i~~~~---~~~~~~~~~~~~~~g~ 263 (291)
.++++||++|+| -|..+..+++....+++.+++.+++-.+.+++.. ... ..+... ...|..+.+++. .+.
T Consensus 296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~~-~~~ 373 (521)
T PRK03612 296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKL-AEK 373 (521)
T ss_pred CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHHhC-CCC
Confidence 567889999875 4555566666544369999999999999988721 000 000000 012333444432 348
Q ss_pred ccEEEEccCC-----------hHHHHHHHHhhccCccc
Q 022819 264 ADYSFECIGD-----------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 264 ~d~vld~~g~-----------~~~~~~~~~~l~~~G~i 290 (291)
+|+|+-.... .+.++.+.+.|+++|.+
T Consensus 374 fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~l 411 (521)
T PRK03612 374 FDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLL 411 (521)
T ss_pred CCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEE
Confidence 9977654332 13577889999999975
No 488
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.77 E-value=1.3 Score=37.91 Aligned_cols=79 Identities=22% Similarity=0.233 Sum_probs=46.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH-HHcCCce-Ee--CCCCCCchHHHHHHHHh--cC-C
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA-KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG-G 263 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~-~~~~~~~a-~~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g-~ 263 (291)
.++++||+|+ |.+|..++..+...|+ +|+.+.+ ++++.+.+ .+++... ++ |..+ ..++.+.+.+.. .+ +
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTD-REQVQAMFATATEHFGKP 81 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHhCCC
Confidence 3578999987 9999999998888999 7766543 44443333 3343221 22 3322 123333333321 13 4
Q ss_pred ccEEEEccCC
Q 022819 264 ADYSFECIGD 273 (291)
Q Consensus 264 ~d~vld~~g~ 273 (291)
+|+++.+.|.
T Consensus 82 id~li~~ag~ 91 (253)
T PRK08642 82 ITTVVNNALA 91 (253)
T ss_pred CeEEEECCCc
Confidence 9999998763
No 489
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=92.77 E-value=0.62 Score=47.20 Aligned_cols=45 Identities=36% Similarity=0.601 Sum_probs=39.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCC
Q 022819 195 STVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGV 239 (291)
Q Consensus 195 ~~vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~~g~ 239 (291)
++|.|+|.|.+|.+.++.++..|. .+|+++++++++.+.++++|+
T Consensus 4 ~~I~IIG~G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~ 49 (735)
T PRK14806 4 GRVVVIGLGLIGGSFAKALRERGLAREVVAVDRRAKSLELAVSLGV 49 (735)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCC
Confidence 678999999999999999999883 379999999999888888775
No 490
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=92.72 E-value=0.71 Score=41.77 Aligned_cols=36 Identities=25% Similarity=0.317 Sum_probs=32.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~ 229 (291)
.+++|.|+|.|.+|...++.++.+|+ +|+++++..+
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~ 170 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK 170 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence 57899999999999999999999999 9999976543
No 491
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=92.69 E-value=0.53 Score=44.02 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=30.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~ 227 (291)
...+|+|+|+|++|..++..+..+|..++..+|.+
T Consensus 41 ~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 41 KNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 34679999999999999999999999888888753
No 492
>PLN02256 arogenate dehydrogenase
Probab=92.69 E-value=1.7 Score=39.24 Aligned_cols=53 Identities=19% Similarity=0.281 Sum_probs=40.2
Q ss_pred HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 022819 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (291)
Q Consensus 185 l~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~ 239 (291)
+.+..+-....+|.|+|.|.+|...+..++..|. .|+++++++. .+.++++|+
T Consensus 27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv 79 (304)
T PLN02256 27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGV 79 (304)
T ss_pred HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCC
Confidence 3444444566789999999999999998888887 8888988764 355666665
No 493
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.69 E-value=0.75 Score=41.03 Aligned_cols=39 Identities=21% Similarity=0.359 Sum_probs=34.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022819 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (291)
Q Consensus 195 ~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a 234 (291)
.+|.|+|+|.+|...++.+...|. .|+..+.+++.++.+
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~~ 44 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATAG 44 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHH
Confidence 478899999999999988888899 999999999987763
No 494
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=92.68 E-value=1.1 Score=39.93 Aligned_cols=43 Identities=28% Similarity=0.438 Sum_probs=36.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 022819 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (291)
Q Consensus 196 ~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~ 239 (291)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~ 46 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA 46 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 68889999999988888888898 88999999988887776654
No 495
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=92.67 E-value=1.1 Score=38.71 Aligned_cols=93 Identities=17% Similarity=0.296 Sum_probs=55.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh------hhHH--HHHHcCCceE---------------eCCCCCC
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP------EKCE--KAKAFGVTEF---------------LNPNDNN 249 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~------~~~~--~a~~~g~~~~---------------i~~~~~~ 249 (291)
+...|+|+|.|++|..++..+-..|+.++..+|-++ .|+- +....|-..+ +...+ .
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~-~ 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN-D 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH-h
Confidence 457799999999999999999999998888876533 1111 1111221111 11110 0
Q ss_pred chHHHHHHHHhcCCccEEEEccCChHHHHHHHHhhcc
Q 022819 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCD 286 (291)
Q Consensus 250 ~~~~~~~~~~~~g~~d~vld~~g~~~~~~~~~~~l~~ 286 (291)
.-..+.+.++...++|.|+|++..-..=..++..+.+
T Consensus 108 f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~ 144 (263)
T COG1179 108 FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRR 144 (263)
T ss_pred hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHH
Confidence 1123445566666999999998874443344444443
No 496
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.66 E-value=1 Score=38.22 Aligned_cols=78 Identities=18% Similarity=0.298 Sum_probs=45.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HHcCCce-Ee--CCCCCCchHHHHHHHHhc--
Q 022819 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRITD-- 261 (291)
Q Consensus 193 ~~~~vlV~G~-g~~G~~~i~~a~~~g~~~vi~~~~-~~~~~~~a----~~~g~~~-~i--~~~~~~~~~~~~~~~~~~-- 261 (291)
+.+++||+|+ |.+|..++..+...|. +++.+.+ +++..+.+ +..+... ++ |..+ ..++.+.+.+...
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD-KAALEAAVAAAVERF 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC-HHHHHHHHHHHHHHc
Confidence 3468999987 9999999999999999 6655444 34333322 2223221 22 3322 2333333333221
Q ss_pred CCccEEEEccC
Q 022819 262 GGADYSFECIG 272 (291)
Q Consensus 262 g~~d~vld~~g 272 (291)
+.+|+++.+.|
T Consensus 83 ~~id~vi~~ag 93 (249)
T PRK12825 83 GRIDILVNNAG 93 (249)
T ss_pred CCCCEEEECCc
Confidence 37899999887
No 497
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=92.65 E-value=0.28 Score=42.48 Aligned_cols=97 Identities=19% Similarity=0.263 Sum_probs=56.9
Q ss_pred HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHc----CCce--EeCCCCCCchHHHHHHH
Q 022819 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAF----GVTE--FLNPNDNNEPVQQVIKR 258 (291)
Q Consensus 186 ~~~~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~-~~vi~~~~~~~~~~~a~~~----g~~~--~i~~~~~~~~~~~~~~~ 258 (291)
.+....+++++||-+|+| .|..+..+++..+. .+|+++|.+++-++.+++. +... .+.-+. .++ .
T Consensus 40 ~~~~~~~~g~~vLDv~~G-tG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da--~~l-----p 111 (233)
T PF01209_consen 40 IKLLGLRPGDRVLDVACG-TGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDA--EDL-----P 111 (233)
T ss_dssp HHHHT--S--EEEEET-T-TSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BT--TB-------
T ss_pred HhccCCCCCCEEEEeCCC-hHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCH--HHh-----c
Confidence 344567889999999876 56777788887653 3899999999988888642 2211 121111 111 1
Q ss_pred HhcCCccEEEEccCC------hHHHHHHHHhhccCccc
Q 022819 259 ITDGGADYSFECIGD------TGMITTALQSCCDVRSI 290 (291)
Q Consensus 259 ~~~g~~d~vld~~g~------~~~~~~~~~~l~~~G~i 290 (291)
+.+..||+|.-+.|- ...+.+..+.|+|||++
T Consensus 112 ~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l 149 (233)
T PF01209_consen 112 FPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRL 149 (233)
T ss_dssp S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEE
T ss_pred CCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEE
Confidence 112368988876553 45688999999999986
No 498
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.64 E-value=0.74 Score=43.66 Aligned_cols=71 Identities=27% Similarity=0.377 Sum_probs=48.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hhH----HHHHHcCCceEeCCCCCCchHHHHHHHHhcCCccEE
Q 022819 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKC----EKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYS 267 (291)
Q Consensus 193 ~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~-~~~----~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~g~~d~v 267 (291)
.+++++|+|+|.+|+.++..+...|+ .|++++.++ +.. +.+++.|........ .+ .. .+.+|+|
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~---~~---~~----~~~~d~v 72 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIELVLGEY---PE---EF----LEGVDLV 72 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCEEEeCCc---ch---hH----hhcCCEE
Confidence 46889999999999999999999999 899998764 222 333455654322211 11 11 1368999
Q ss_pred EEccCCh
Q 022819 268 FECIGDT 274 (291)
Q Consensus 268 ld~~g~~ 274 (291)
+.+.|.+
T Consensus 73 v~~~g~~ 79 (450)
T PRK14106 73 VVSPGVP 79 (450)
T ss_pred EECCCCC
Confidence 9988863
No 499
>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional
Probab=92.64 E-value=0.59 Score=40.04 Aligned_cols=94 Identities=19% Similarity=0.224 Sum_probs=58.1
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCceEeCCCCCCchHHHHHHHHhcCCc
Q 022819 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITDGGA 264 (291)
Q Consensus 189 ~~~~~~~~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~----g~~~~i~~~~~~~~~~~~~~~~~~g~~ 264 (291)
....++.+||-+|+|. |..+..+++ .++ ++++++.+++..+.+++. +... +... .+..+.. ....+.+
T Consensus 44 ~~~~~~~~vLdiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~--~~~~--~~~~~~~-~~~~~~f 115 (233)
T PRK05134 44 AGGLFGKRVLDVGCGG-GILSESMAR-LGA-DVTGIDASEENIEVARLHALESGLKI--DYRQ--TTAEELA-AEHPGQF 115 (233)
T ss_pred ccCCCCCeEEEeCCCC-CHHHHHHHH-cCC-eEEEEcCCHHHHHHHHHHHHHcCCce--EEEe--cCHHHhh-hhcCCCc
Confidence 3455788899998863 666666666 477 899999998887777642 2211 1111 1222221 1123489
Q ss_pred cEEEE-----ccCC-hHHHHHHHHhhccCccc
Q 022819 265 DYSFE-----CIGD-TGMITTALQSCCDVRSI 290 (291)
Q Consensus 265 d~vld-----~~g~-~~~~~~~~~~l~~~G~i 290 (291)
|+|+- .... ...++.+.+.|+++|++
T Consensus 116 D~Ii~~~~l~~~~~~~~~l~~~~~~L~~gG~l 147 (233)
T PRK05134 116 DVVTCMEMLEHVPDPASFVRACAKLVKPGGLV 147 (233)
T ss_pred cEEEEhhHhhccCCHHHHHHHHHHHcCCCcEE
Confidence 98854 3333 34578888999999975
No 500
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=92.62 E-value=0.41 Score=42.65 Aligned_cols=83 Identities=14% Similarity=0.193 Sum_probs=52.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCceEeCCCCC-Cc--hHHHHHHHHhcCCccEEEEccC
Q 022819 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN-NE--PVQQVIKRITDGGADYSFECIG 272 (291)
Q Consensus 196 ~vlV~G~g~~G~~~i~~a~~~g~~~vi~~~~~~~~~~~a~~~g~~~~i~~~~~-~~--~~~~~~~~~~~g~~d~vld~~g 272 (291)
+|.|+|+|.+|...+..+...|. .|..+++++++.+.+++.|... + +.. .. .......+. ..+|+||-++.
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~~~--~~~d~vila~k 75 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPAEL--GPQDLVILAVK 75 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChhHc--CCCCEEEEecc
Confidence 58899999999998888888898 8888888788877777655422 1 000 00 000001111 36899998888
Q ss_pred ChHHHHHHHHhhc
Q 022819 273 DTGMITTALQSCC 285 (291)
Q Consensus 273 ~~~~~~~~~~~l~ 285 (291)
.. .+..+++.++
T Consensus 76 ~~-~~~~~~~~l~ 87 (304)
T PRK06522 76 AY-QLPAALPSLA 87 (304)
T ss_pred cc-cHHHHHHHHh
Confidence 63 2344444443
Done!