BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022826
(291 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 131/225 (58%), Gaps = 14/225 (6%)
Query: 37 KGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
+GFC R L+Y +++NGS+ + E+ E+ L W +IA+G ARGL YLH
Sbjct: 101 RGFCMTPTERLLVYPYMANGSVASCLRERP--ESQPPLDWPKRQRIALGSARGLAYLHDH 158
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
C+ +I+H D+K NILLDE+F + DFGLAK+ ++ V RGT+G+IAPE
Sbjct: 159 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX-XAVRGTIGHIAPEYL-- 215
Query: 157 NFGEVSYKSDVYSYGMMVFEM-TGVKNNANVAVDRSSEIYFPHWVY-----KRLELEEDL 210
+ G+ S K+DV+ YG+M+ E+ TG + + ++ WV K+LE D+
Sbjct: 216 STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV 275
Query: 211 GLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGS 255
LQG +E+ E ++I V+L C Q++P +RP M+ VV MLEG
Sbjct: 276 DLQGNYKDEEVE---QLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 131/225 (58%), Gaps = 14/225 (6%)
Query: 37 KGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
+GFC R L+Y +++NGS+ + E+ E+ L W +IA+G ARGL YLH
Sbjct: 93 RGFCMTPTERLLVYPYMANGSVASCLRERP--ESQPPLDWPKRQRIALGSARGLAYLHDH 150
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
C+ +I+H D+K NILLDE+F + DFGLAK+ ++ V RG +G+IAPE
Sbjct: 151 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX-XAVRGXIGHIAPEYL-- 207
Query: 157 NFGEVSYKSDVYSYGMMVFEM-TGVKNNANVAVDRSSEIYFPHWVY-----KRLELEEDL 210
+ G+ S K+DV+ YG+M+ E+ TG + + ++ WV K+LE D+
Sbjct: 208 STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV 267
Query: 211 GLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGS 255
LQG N +D+E ++I V+L C Q++P +RP M+ VV MLEG
Sbjct: 268 DLQG--NYKDEE-VEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
GFC E + LIY+++ NG+L++ +Y L T + WE +I +G ARGL YLH
Sbjct: 102 GFCDERNEMILIYKYMENGNLKRHLYGS-DLPT-MSMSWEQRLEICIGAARGLHYLH--- 156
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
I+H D+K NILLDE+F PKI+DFG++K + +GT+GYI PE F +
Sbjct: 157 TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIK- 215
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGI-- 215
G ++ KSDVYS+G+++FE+ ++ ++ R + W +E + L+ I
Sbjct: 216 -GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM-VNLAEWA---VESHNNGQLEQIVD 270
Query: 216 ENEEDK---EYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSL 256
N DK E RK ++ C+ + DRP+M V+ LE +L
Sbjct: 271 PNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 122/224 (54%), Gaps = 16/224 (7%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
GFC E + LIY+++ NG+L++ +Y L T + WE +I +G ARGL YLH
Sbjct: 102 GFCDERNEMILIYKYMENGNLKRHLYGS-DLPT-MSMSWEQRLEICIGAARGLHYLH--- 156
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
I+H D+K NILLDE+F PKI+DFG++K +GT+GYI PE F +
Sbjct: 157 TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIK- 215
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGI-- 215
G ++ KSDVYS+G+++FE+ ++ ++ R + W +E + L+ I
Sbjct: 216 -GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM-VNLAEWA---VESHNNGQLEQIVD 270
Query: 216 ENEEDK---EYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSL 256
N DK E RK ++ C+ + DRP+M V+ LE +L
Sbjct: 271 PNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 112/225 (49%), Gaps = 18/225 (8%)
Query: 33 LNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEY 92
L E GF +G L+Y ++ NGSL + L+ L W + KIA G A G+ +
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSL---LDRLSCLDGTPPLSWHMRCKIAQGAANGINF 148
Query: 93 LHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE 152
LH + +H DIK NILLDE F KISDFGLA+ V + GT Y+APE
Sbjct: 149 LHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE 205
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFE-MTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLG 211
GE++ KSD+YS+G+++ E +TG+ AVD E + + +E EE
Sbjct: 206 AL---RGEITPKSDIYSFGVVLLEIITGLP-----AVDEHREPQLLLDIKEEIEDEEKTI 257
Query: 212 LQGIE---NEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
I+ N+ D M V+ C+ + RP + +V ++L+
Sbjct: 258 EDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 111/225 (49%), Gaps = 18/225 (8%)
Query: 33 LNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEY 92
L E GF +G L+Y ++ NGSL + L+ L W + KIA G A G+ +
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSL---LDRLSCLDGTPPLSWHMRCKIAQGAANGINF 148
Query: 93 LHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE 152
LH + +H DIK NILLDE F KISDFGLA+ V GT Y+APE
Sbjct: 149 LHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE 205
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFE-MTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLG 211
GE++ KSD+YS+G+++ E +TG+ AVD E + + +E EE
Sbjct: 206 AL---RGEITPKSDIYSFGVVLLEIITGLP-----AVDEHREPQLLLDIKEEIEDEEKTI 257
Query: 212 LQGIE---NEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
I+ N+ D M V+ C+ + RP + +V ++L+
Sbjct: 258 EDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 111/225 (49%), Gaps = 18/225 (8%)
Query: 33 LNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEY 92
L E GF +G L+Y ++ NGSL + L+ L W + KIA G A G+ +
Sbjct: 86 LVELLGFSSDGDDLCLVYVYMPNGSL---LDRLSCLDGTPPLSWHMRCKIAQGAANGINF 142
Query: 93 LHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE 152
LH + +H DIK NILLDE F KISDFGLA+ V GT Y+APE
Sbjct: 143 LHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE 199
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFE-MTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLG 211
GE++ KSD+YS+G+++ E +TG+ AVD E + + +E EE
Sbjct: 200 AL---RGEITPKSDIYSFGVVLLEIITGLP-----AVDEHREPQLLLDIKEEIEDEEKTI 251
Query: 212 LQGIE---NEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
I+ N+ D M V+ C+ + RP + +V ++L+
Sbjct: 252 EDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 108/225 (48%), Gaps = 18/225 (8%)
Query: 33 LNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEY 92
L E GF +G L+Y + NGSL + L+ L W KIA G A G+ +
Sbjct: 83 LVELLGFSSDGDDLCLVYVYXPNGSL---LDRLSCLDGTPPLSWHXRCKIAQGAANGINF 139
Query: 93 LHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE 152
LH + +H DIK NILLDE F KISDFGLA+ V + GT Y APE
Sbjct: 140 LHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE 196
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFE-MTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLG 211
GE++ KSD+YS+G+++ E +TG+ AVD E + + +E EE
Sbjct: 197 AL---RGEITPKSDIYSFGVVLLEIITGLP-----AVDEHREPQLLLDIKEEIEDEEKTI 248
Query: 212 LQGIE---NEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
I+ N+ D V+ C+ + RP + +V ++L+
Sbjct: 249 EDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 25/220 (11%)
Query: 33 LNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEY 92
L + G C E L++EF+ +G L ++ + L E L + + + G+ Y
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-----FAAETLLGMCLDVCEGMAY 118
Query: 93 LHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE 152
L C ++H D+ N L+ E+ K+SDFG+ + + S TG + V + +PE
Sbjct: 119 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 174
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGL 212
VF +F S KSDV+S+G++++E+ SE P+ E+ ED+
Sbjct: 175 VF--SFSRYSSKSDVWSFGVLMWEVF-------------SEGKIPYENRSNSEVVEDIS- 218
Query: 213 QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEML 252
G + + + + + C + P DRPA +R++ L
Sbjct: 219 TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 25/220 (11%)
Query: 33 LNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEY 92
L + G C E L++EF+ +G L ++ + L E L + + + G+ Y
Sbjct: 84 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-----FAAETLLGMCLDVCEGMAY 138
Query: 93 LHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE 152
L C ++H D+ N L+ E+ K+SDFG+ + + S TG + V + +PE
Sbjct: 139 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 194
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGL 212
VF +F S KSDV+S+G++++E+ SE P+ E+ ED+
Sbjct: 195 VF--SFSRYSSKSDVWSFGVLMWEVF-------------SEGKIPYENRSNSEVVEDIS- 238
Query: 213 QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEML 252
G + + + + + C + P DRPA +R++ L
Sbjct: 239 TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 25/220 (11%)
Query: 33 LNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEY 92
L + G C E L++EF+ +G L ++ + L E L + + + G+ Y
Sbjct: 62 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-----FAAETLLGMCLDVCEGMAY 116
Query: 93 LHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE 152
L C ++H D+ N L+ E+ K+SDFG+ + + S TG + V + +PE
Sbjct: 117 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 172
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGL 212
VF +F S KSDV+S+G++++E+ SE P+ E+ ED+
Sbjct: 173 VF--SFSRYSSKSDVWSFGVLMWEVF-------------SEGKIPYENRSNSEVVEDIS- 216
Query: 213 QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEML 252
G + + + + + C + P DRPA +R++ L
Sbjct: 217 TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 25/220 (11%)
Query: 33 LNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEY 92
L + G C E L++EF+ +G L ++ + L E L + + + G+ Y
Sbjct: 67 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-----FAAETLLGMCLDVCEGMAY 121
Query: 93 LHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE 152
L C ++H D+ N L+ E+ K+SDFG+ + + S TG + V + +PE
Sbjct: 122 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 177
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGL 212
VF +F S KSDV+S+G++++E+ SE P+ E+ ED+
Sbjct: 178 VF--SFSRYSSKSDVWSFGVLMWEVF-------------SEGKIPYENRSNSEVVEDIS- 221
Query: 213 QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEML 252
G + + + + + C + P DRPA +R++ L
Sbjct: 222 TGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + E N VL +A I+ +EYL +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMATQISSAMEYLEK-- 134
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 135 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYN 192
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 193 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 241
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 242 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 272
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + E N VL +A I+ +EYL +
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV----VLLYMATQISSAMEYLEK-- 134
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 135 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 192
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 193 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 241
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 242 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 272
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + E N VL +A I+ +EYL +
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMATQISSAMEYLEK-- 133
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 134 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 191
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 192 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 240
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 241 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 271
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + E N VL +A I+ +EYL +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMATQISSAMEYLEK-- 134
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 135 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 192
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 193 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 241
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 242 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 272
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + E N VL +A I+ +EYL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMATQISSAMEYLEK-- 129
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 130 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 187
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 188 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 236
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 237 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + E N VL +A I+ +EYL +
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV----VLLYMATQISSAMEYLEK-- 130
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 131 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYN 188
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 189 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 237
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 238 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 268
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + E N VL +A I+ +EYL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMATQISSAMEYLEK-- 129
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 130 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 187
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 188 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 236
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 237 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + E N VL +A I+ +EYL +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMATQISSAMEYLEK-- 134
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 135 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 192
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 193 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 241
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 242 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 272
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + E N VL +A I+ +EYL +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMATQISSAMEYLEK-- 131
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 132 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 189
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 190 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 238
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 239 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + E N VL +A I+ +EYL +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMATQISSAMEYLEK-- 131
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 132 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 189
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 190 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 238
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 239 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 269
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 33 LNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEY 92
L + G C E L+ EF+ +G L ++ + L E L + + + G+ Y
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL-----FAAETLLGMCLDVCEGMAY 119
Query: 93 LHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE 152
L C ++H D+ N L+ E+ K+SDFG+ + + S TG + V + +PE
Sbjct: 120 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 175
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGL 212
VF +F S KSDV+S+G++++E+ SE P+ E+ ED+
Sbjct: 176 VF--SFSRYSSKSDVWSFGVLMWEVF-------------SEGKIPYENRSNSEVVEDIS- 219
Query: 213 QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEML 252
G + + + + + C + P DRPA +R++ L
Sbjct: 220 TGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + E N VL +A I+ +EYL +
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMATQISSAMEYLEK-- 142
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 143 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 200
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 201 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 249
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 250 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 280
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + E N VL +A I+ +EYL +
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMATQISSAMEYLEK-- 130
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 131 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYN 188
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 189 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 237
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 238 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 268
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + Q++ VL +A I+ +EYL +
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECN----RQEVSAVVLLYMATQISSAMEYLEK-- 127
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 128 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYN 185
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D P VY+ LE+D ++ E
Sbjct: 186 --KFSIKSDVWAFGVLLWEIATYGMSPYPGID-------PSQVYEL--LEKDYRMERPEG 234
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 235 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 265
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + E N VL +A I+ +EYL +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMATQISSAMEYLEK-- 131
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 132 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYN 189
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 190 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 238
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 239 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 269
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + Q++ VL +A I+ +EYL +
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECN----RQEVSAVVLLYMATQISSAMEYLEK-- 127
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 128 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYN 185
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D P VY+ LE+D ++ E
Sbjct: 186 --KFSIKSDVWAFGVLLWEIATYGMSPYPGID-------PSQVYEL--LEKDYRMERPEG 234
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 235 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 265
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + Q++ VL +A I+ +EYL +
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECN----RQEVSAVVLLYMATQISSAMEYLEK-- 127
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 128 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYN 185
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D P VY+ LE+D ++ E
Sbjct: 186 --KFSIKSDVWAFGVLLWEIATYGMSPYPGID-------PSQVYEL--LEKDYRMERPEG 234
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 235 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 265
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 107/217 (49%), Gaps = 22/217 (10%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+++ E++S GSL + + H ++L +A +A+G+ YLH N I+H ++
Sbjct: 110 SIVTEYLSRGSLYRLL---HKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNL 165
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
K N+L+D+ + K+ DFGL+++ + +S A GT ++APEV + KSD
Sbjct: 166 KSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDE--PSNEKSD 221
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
VYS+G++++E+ ++ ++ + + + KRLE+ +L Q E
Sbjct: 222 VYSFGVILWELATLQQPWG-NLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEG------ 274
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLEGSLDSLRIPP 263
C N P RP+ ++++L + S PP
Sbjct: 275 -------CWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + Q++ VL +A I+ +EYL +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECN----RQEVSAVVLLYMATQISSAMEYLEK-- 134
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 135 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 192
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 193 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 241
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 242 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 272
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + Q++ VL +A I+ +EYL +
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECN----RQEVSAVVLLYMATQISSAMEYLEK-- 129
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 130 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 187
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 188 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 236
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 237 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + Q++ VL +A I+ +EYL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECN----RQEVSAVVLLYMATQISSAMEYLEK-- 129
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 130 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 187
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 188 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 236
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 237 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + Q++ VL +A I+ +EYL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECN----RQEVSAVVLLYMATQISSAMEYLEK-- 129
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 130 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 187
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 188 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 236
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 237 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + Q++ VL +A I+ +EYL +
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECN----RQEVSAVVLLYMATQISSAMEYLEK-- 129
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H D+ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 130 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 187
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 188 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 236
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 237 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 267
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP--LE--------TNQKLKWEVLYKIAVGIA 87
G C + +I E+ S G+L +++ + P LE ++L + L A +A
Sbjct: 101 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVA 160
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ ED KI+DFGLA+ H + T R V
Sbjct: 161 RGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVK 217
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 218 WMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSP----------------YPGVPV 258
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 259 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 33 LNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEY 92
L + G C E L++EF+ +G L ++ + L E L + + + G+ Y
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-----FAAETLLGMCLDVCEGMAY 118
Query: 93 LHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE 152
L ++H D+ N L+ E+ K+SDFG+ + + S TG + V + +PE
Sbjct: 119 LEEA---SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 174
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGL 212
VF +F S KSDV+S+G++++E+ SE P+ E+ ED+
Sbjct: 175 VF--SFSRYSSKSDVWSFGVLMWEVF-------------SEGKIPYENRSNSEVVEDIS- 218
Query: 213 QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEML 252
G + + + + + C + P DRPA +R++ L
Sbjct: 219 TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + E N VL +A I+ +EYL +
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMATQISSAMEYLEK-- 333
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H ++ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 334 -KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 391
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 392 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 440
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 441 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 471
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+++ E++S GSL + + H ++L +A +A+G+ YLH N I+H D+
Sbjct: 110 SIVTEYLSRGSLYRLL---HKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDL 165
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
K N+L+D+ + K+ DFGL+++ + A GT ++APEV + KSD
Sbjct: 166 KSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDE--PSNEKSD 221
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
VYS+G++++E+ ++ ++ + + + KRLE+ +L Q E
Sbjct: 222 VYSFGVILWELATLQQPWG-NLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEG------ 274
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLEGSLDSLRIPP 263
C N P RP+ ++++L + S PP
Sbjct: 275 -------CWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + E N VL +A I+ +EYL +
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMATQISSAMEYLEK-- 375
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H ++ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 376 -KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 433
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 434 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 482
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 483 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 513
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP--LETN--------QKLKWEVLYKIAVGIA 87
G C + +I E+ S G+L +++ + P LE + ++L + L A +A
Sbjct: 93 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVA 152
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ ED KI+DFGLA+ H + T R V
Sbjct: 153 RGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK 209
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 210 WMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSP----------------YPGVPV 250
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 251 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 299
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP--LETN--------QKLKWEVLYKIAVGIA 87
G C + +I E+ S G+L +++ + P LE + ++L + L A +A
Sbjct: 94 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVA 153
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ ED KI+DFGLA+ H + T R V
Sbjct: 154 RGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK 210
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 211 WMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSP----------------YPGVPV 251
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 252 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 300
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP--LETN--------QKLKWEVLYKIAVGIA 87
G C + +I E+ S G+L +++ + P LE + ++L + L A +A
Sbjct: 101 GACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVA 160
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ ED KI+DFGLA+ H + T R V
Sbjct: 161 RGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK 217
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 218 WMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSP----------------YPGVPV 258
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 259 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP--LETN--------QKLKWEVLYKIAVGIA 87
G C + +I E+ S G+L +++ + P LE + ++L + L A +A
Sbjct: 101 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVA 160
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ ED KI+DFGLA+ H + T R V
Sbjct: 161 RGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK 217
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 218 WMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSP----------------YPGVPV 258
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 259 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP--LETN--------QKLKWEVLYKIAVGIA 87
G C + +I E+ S G+L +++ + P LE + ++L + L A +A
Sbjct: 90 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVA 149
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ ED KI+DFGLA+ H + T R V
Sbjct: 150 RGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK 206
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 207 WMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSP----------------YPGVPV 247
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 248 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 296
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP--LETN--------QKLKWEVLYKIAVGIA 87
G C + +I E+ S G+L +++ + P LE + ++L + L A +A
Sbjct: 142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVA 201
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ ED KI+DFGLA+ H + T R V
Sbjct: 202 RGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK 258
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 259 WMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSP----------------YPGVPV 299
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 300 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP--LE--------TNQKLKWEVLYKIAVGIA 87
G C + +I E+ S G+L +++ + P LE ++L + L A +A
Sbjct: 86 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVA 145
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ ED KI+DFGLA+ H + T R V
Sbjct: 146 RGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK 202
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 203 WMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSP----------------YPGVPV 243
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 244 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP--LE--------TNQKLKWEVLYKIAVGIA 87
G C + +I E+ S G+L +++ + P LE ++L + L A +A
Sbjct: 101 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVA 160
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ ED KI+DFGLA+ H + T R V
Sbjct: 161 RGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK 217
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 218 WMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSP----------------YPGVPV 258
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 259 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S GSL F+ ET + L+ L +A IA G+ Y+ R +H D++
Sbjct: 338 IVTEYMSKGSLLDFLKG----ETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 390
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 391 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 447
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 448 WSFGILLTELT 458
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C +I EF++ G+L ++ E + Q++ VL +A I+ +EYL +
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECN----RQEVSAVVLLYMATQISSAMEYLEK-- 336
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+H ++ N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N
Sbjct: 337 -KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN 394
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ S KSDV+++G++++E+ + +D S VY+ LE+D ++ E
Sbjct: 395 --KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYEL--LEKDYRMERPEG 443
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+K Y C Q NPSDRP+ + + E
Sbjct: 444 CPEKVYELMRA-----CWQWNPSDRPSFAEIHQAFE 474
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S GSL F+ ET + L+ L +A IA G+ Y+ R +H D++
Sbjct: 79 IVTEYMSKGSLLDFLKG----ETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 131
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 132 AANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKWTAPEAAL--YGRFTIKSDV 188
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 189 WSFGILLTELT 199
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S GSL F+ ET + L+ L +A IA G+ Y+ R +H D++
Sbjct: 255 IVTEYMSKGSLLDFLKG----ETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 307
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 364
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 365 WSFGILLTELT 375
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S GSL F+ ET + L+ L +A IA G+ Y+ R +H D++
Sbjct: 255 IVTEYMSKGSLLDFLKG----ETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 307
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 364
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 365 WSFGILLTELT 375
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S GSL F+ ET + L+ L +A IA G+ Y+ R +H D++
Sbjct: 82 IVTEYMSKGSLLDFLKG----ETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 134
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 135 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 191
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 192 WSFGILLTELT 202
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S GSL F+ ET + L+ L +A IA G+ Y+ R +H D++
Sbjct: 255 IVGEYMSKGSLLDFLKG----ETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 307
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 364
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 365 WSFGILLTELT 375
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 21/149 (14%)
Query: 37 KGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
+G C + L+ EF G L + + + +++ ++L AV IARG+ YLH
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVL-------SGKRIPPDILVNWAVQIARGMNYLHDE 124
Query: 97 CNTRILHFDIKPHNILLDEDF--------CPKISDFGLAKICHGRESIVSMTGARGTVGY 148
I+H D+K NIL+ + KI+DFGLA+ H R + +S GA +
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH-RTTKMSAAGA---YAW 180
Query: 149 IAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
+APEV + S SDV+SYG++++E+
Sbjct: 181 MAPEVIRASM--FSKGSDVWSYGVLLWEL 207
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 10/135 (7%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
A++ ++ SL K + H ET K + L IA A+G++YLH I+H D+
Sbjct: 107 AIVTQWCEGSSLYKHL---HVQET--KFQMFQLIDIARQTAQGMDYLH---AKNIIHRDM 158
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVSYKS 165
K +NI L E KI DFGLA + + G+V ++APEV ++ S++S
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 166 DVYSYGMMVFE-MTG 179
DVYSYG++++E MTG
Sbjct: 219 DVYSYGIVLYELMTG 233
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 10/142 (7%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
A++ ++ SL + H ET K + + L IA ARG++YLH I+H D+
Sbjct: 83 AIVTQWCEGSSL---YHHLHASET--KFEMKKLIDIARQTARGMDYLHAKS---IIHRDL 134
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVSYKS 165
K +NI L ED KI DFGLA + G++ ++APEV ++ S++S
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 166 DVYSYGMMVFE-MTGVKNNANV 186
DVY++G++++E MTG +N+
Sbjct: 195 DVYAFGIVLYELMTGQLPYSNI 216
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S GSL F+ E + L+ L +A IA G+ Y+ R +H D++
Sbjct: 89 IVIEYMSKGSLLDFLKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKWTAPEAAL--YGRFTIKSDV 198
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 199 WSFGILLTELT 209
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S GSL F+ E + L+ L +A IA G+ Y+ R +H D++
Sbjct: 80 IVTEYMSKGSLLDFLKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 132
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 133 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 189
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 190 WSFGILLTELT 200
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S GSL F+ E + L+ L +A IA G+ Y+ R +H D++
Sbjct: 89 IVIEYMSKGSLLDFLKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 198
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 199 WSFGILLTELT 209
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S GSL F+ E + L+ L +A IA G+ Y+ R +H D++
Sbjct: 78 IVTEYMSKGSLLDFLKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 130
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 131 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 187
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 188 WSFGILLTELT 198
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S GSL F+ E + L+ L +A IA G+ Y+ R +H D++
Sbjct: 89 IVTEYMSKGSLLDFLKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 198
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 199 WSFGILLTELT 209
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S GSL F+ E + L+ L +A IA G+ Y+ R +H D++
Sbjct: 89 IVTEYMSKGSLLDFLKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 198
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 199 WSFGILLTELT 209
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E+++ GSL F+ ET + L+ L ++ IA G+ Y+ R +H D++
Sbjct: 86 IVTEYMNKGSLLDFLKG----ETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLR 138
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 195
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 196 WSFGILLTELT 206
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E+++ GSL F+ ET + L+ L ++ IA G+ Y+ R +H D++
Sbjct: 86 IVTEYMNKGSLLDFLKG----ETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLR 138
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNE-WTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 195
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 196 WSFGILLTELT 206
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S GSL F+ E + L+ L +A IA G+ Y+ R +H D++
Sbjct: 89 IVCEYMSKGSLLDFLKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 198
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 199 WSFGILLTELT 209
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 10/142 (7%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
A++ ++ SL + H +ET K + L IA A+G++YLH I+H D+
Sbjct: 106 AIVTQWCEGSSL---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 157
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVSYKS 165
K +NI L ED KI DFGLA + G++ ++APEV ++ S++S
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 217
Query: 166 DVYSYGMMVFE-MTGVKNNANV 186
DVY++G++++E MTG +N+
Sbjct: 218 DVYAFGIVLYELMTGQLPYSNI 239
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 10/142 (7%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
A++ ++ SL + H +ET K + L IA A+G++YLH I+H D+
Sbjct: 107 AIVTQWCEGSSL---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 158
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVSYKS 165
K +NI L ED KI DFGLA + G++ ++APEV ++ S++S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 166 DVYSYGMMVFE-MTGVKNNANV 186
DVY++G++++E MTG +N+
Sbjct: 219 DVYAFGIVLYELMTGQLPYSNI 240
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL F+ K P + KL L +A IA G+ ++ +H D++
Sbjct: 92 IITEYMENGSLVDFL--KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 144
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ + KI+DFGLA++ E + GA+ + + APE N+G + KSDV
Sbjct: 145 AANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDV 201
Query: 168 YSYGMMVFEM 177
+S+G+++ E+
Sbjct: 202 WSFGILLTEI 211
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S GSL F+ E + L+ L +A IA G+ Y+ R +H D+
Sbjct: 89 IVTEYMSKGSLLDFLKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLA 141
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 198
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 199 WSFGILLTELT 209
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 30/211 (14%)
Query: 48 LIYEFVSNGSL-EKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
++ EFV G L + + + HP+ KW V ++ + IA G+EY+ + N I+H D+
Sbjct: 98 MVMEFVPCGDLYHRLLDKAHPI------KWSVKLRLMLDIALGIEYM-QNQNPPIVHRDL 150
Query: 107 KPHNILL---DED--FCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEV 161
+ NI L DE+ C K++DFGL++ +S+ S++G G ++APE
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESY 205
Query: 162 SYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDK 221
+ K+D YS+ M+++ + + E F + Y +++ + +G+ +
Sbjct: 206 TEKADTYSFAMILYTIL------------TGEGPFDEYSYGKIKFINMIREEGLRPTIPE 253
Query: 222 EYARKMILVSLWCIQNNPSDRPAMNRVVEML 252
+ ++ V C +P RP + +V+ L
Sbjct: 254 DCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL F+ K P + KL L +A IA G+ ++ +H D++
Sbjct: 90 IITEYMENGSLVDFL--KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 142
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ + KI+DFGLA++ E + GA+ + + APE N+G + KSDV
Sbjct: 143 AANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDV 199
Query: 168 YSYGMMVFEM 177
+S+G+++ E+
Sbjct: 200 WSFGILLTEI 209
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL F+ K P + KL L +A IA G+ ++ +H D++
Sbjct: 85 IITEYMENGSLVDFL--KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 137
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ + KI+DFGLA++ E + GA+ + + APE N+G + KSDV
Sbjct: 138 AANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDV 194
Query: 168 YSYGMMVFEM 177
+S+G+++ E+
Sbjct: 195 WSFGILLTEI 204
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL F+ K P + KL L +A IA G+ ++ +H D++
Sbjct: 86 IITEYMENGSLVDFL--KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 138
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ + KI+DFGLA++ E + GA+ + + APE N+G + KSDV
Sbjct: 139 AANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDV 195
Query: 168 YSYGMMVFEM 177
+S+G+++ E+
Sbjct: 196 WSFGILLTEI 205
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S GSL F+ E + L+ L +A IA G+ Y+ R +H D++
Sbjct: 256 IVTEYMSKGSLLDFLKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 308
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGL ++ E + GA+ + + APE +G + KSDV
Sbjct: 309 AANILVGENLVCKVADFGLGRLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 365
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 366 WSFGILLTELT 376
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 10/142 (7%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
A++ ++ SL + H +ET K + L IA A+G++YLH I+H D+
Sbjct: 84 AIVTQWCEGSSL---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 135
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVSYKS 165
K +NI L ED KI DFGLA + G++ ++APEV ++ S++S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 166 DVYSYGMMVFE-MTGVKNNANV 186
DVY++G++++E MTG +N+
Sbjct: 196 DVYAFGIVLYELMTGQLPYSNI 217
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL F+ K P + KL L +A IA G+ ++ +H D++
Sbjct: 93 IITEYMENGSLVDFL--KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 145
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ + KI+DFGLA++ E + GA+ + + APE N+G + KSDV
Sbjct: 146 AANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDV 202
Query: 168 YSYGMMVFEM 177
+S+G+++ E+
Sbjct: 203 WSFGILLTEI 212
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 10/142 (7%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
A++ ++ SL + H +ET K + L IA A+G++YLH I+H D+
Sbjct: 81 AIVTQWCEGSSL---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 132
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVSYKS 165
K +NI L ED KI DFGLA + G++ ++APEV ++ S++S
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 192
Query: 166 DVYSYGMMVFE-MTGVKNNANV 186
DVY++G++++E MTG +N+
Sbjct: 193 DVYAFGIVLYELMTGQLPYSNI 214
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL F+ K P + KL L +A IA G+ ++ +H D++
Sbjct: 84 IITEYMENGSLVDFL--KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 136
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ + KI+DFGLA++ E + GA+ + + APE N+G + KSDV
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDAEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDV 193
Query: 168 YSYGMMVFEM 177
+S+G+++ E+
Sbjct: 194 WSFGILLTEI 203
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL F+ K P + KL L +A IA G+ ++ +H D++
Sbjct: 84 IITEYMENGSLVDFL--KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 136
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ + KI+DFGLA++ E + GA+ + + APE N+G + KSDV
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDV 193
Query: 168 YSYGMMVFEM 177
+S+G+++ E+
Sbjct: 194 WSFGILLTEI 203
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL F+ K P + KL L +A IA G+ ++ +H D++
Sbjct: 84 IITEYMENGSLVDFL--KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 136
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ + KI+DFGLA++ E + GA+ + + APE N+G + KSDV
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAI--NYGTFTIKSDV 193
Query: 168 YSYGMMVFEM 177
+S+G+++ E+
Sbjct: 194 WSFGILLTEI 203
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 10/142 (7%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
A++ ++ SL + H +ET K + L IA A+G++YLH I+H D+
Sbjct: 84 AIVTQWCEGSSL---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 135
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVSYKS 165
K +NI L ED KI DFGLA + G++ ++APEV ++ S++S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 166 DVYSYGMMVFE-MTGVKNNANV 186
DVY++G++++E MTG +N+
Sbjct: 196 DVYAFGIVLYELMTGQLPYSNI 217
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 27/202 (13%)
Query: 51 EFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 110
E+ NG+L I+ ++ L + W + +I L Y+H + I+H D+KP N
Sbjct: 95 EYCENGTLYDLIHSEN-LNQQRDEYWRLFRQIL----EALSYIH---SQGIIHRDLKPMN 146
Query: 111 ILLDEDFCPKISDFGLAKICHGRESIV------------SMTGARGTVGYIAPEVFCRNF 158
I +DE KI DFGLAK H I+ ++T A GT Y+A EV
Sbjct: 147 IFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL-DGT 205
Query: 159 GEVSYKSDVYSYGMMVFEM-----TGVKNNANVAVDRSSEIYF-PHWVYKRLELEEDLGL 212
G + K D+YS G++ FEM TG++ + RS I F P + ++++E+ +
Sbjct: 206 GHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIR 265
Query: 213 QGIENEEDKEYARKMILVSLWC 234
I+++ +K + +L S W
Sbjct: 266 LLIDHDPNKRPGARTLLNSGWL 287
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 10/142 (7%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
A++ ++ SL + H +ET K + L IA A+G++YLH I+H D+
Sbjct: 79 AIVTQWCEGSSL---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 130
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVSYKS 165
K +NI L ED KI DFGLA + G++ ++APEV ++ S++S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 166 DVYSYGMMVFE-MTGVKNNANV 186
DVY++G++++E MTG +N+
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNI 212
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 10/142 (7%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
A++ ++ SL + H +ET K + L IA A+G++YLH I+H D+
Sbjct: 79 AIVTQWCEGSSL---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 130
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVSYKS 165
K +NI L ED KI DFGLA + G++ ++APEV ++ S++S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 166 DVYSYGMMVFE-MTGVKNNANV 186
DVY++G++++E MTG +N+
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNI 212
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL F+ K P + KL L +A IA G+ ++ +H D++
Sbjct: 89 IITEYMENGSLVDFL--KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 141
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ + KI+DFGLA++ E + GA+ + + APE N+G + KSDV
Sbjct: 142 AANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFTIKSDV 198
Query: 168 YSYGMMVFEM 177
+S+G+++ E+
Sbjct: 199 WSFGILLTEI 208
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL F+ K P + KL L +A IA G+ ++ +H D++
Sbjct: 90 IITEYMENGSLVDFL--KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 142
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ + KI+DFGLA++ E + GA+ + + APE N+G + KSDV
Sbjct: 143 AANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFTIKSDV 199
Query: 168 YSYGMMVFEM 177
+S+G+++ E+
Sbjct: 200 WSFGILLTEI 209
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E+++ GSL F+ + K+ L + IA G+ Y+ R +H D++
Sbjct: 85 IITEYMAKGSLLDFLKS----DEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLR 137
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
N+L+ E KI+DFGLA++ E + GA+ + + APE NFG + KSDV
Sbjct: 138 AANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NFGCFTIKSDV 194
Query: 168 YSYGMMVFEMT 178
+S+G++++E+
Sbjct: 195 WSFGILLYEIV 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL F+ K P + KL L +A IA G+ ++ +H D++
Sbjct: 84 IITEYMENGSLVDFL--KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 136
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ + KI+DFGLA++ E + GA+ + + APE N+G + KSDV
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFTIKSDV 193
Query: 168 YSYGMMVFEM 177
+S+G+++ E+
Sbjct: 194 WSFGILLTEI 203
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL F+ K P + KL L +A IA G+ ++ +H D++
Sbjct: 79 IITEYMENGSLVDFL--KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 131
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ + KI+DFGLA++ E + GA+ + + APE N+G + KSDV
Sbjct: 132 AANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFTIKSDV 188
Query: 168 YSYGMMVFEM 177
+S+G+++ E+
Sbjct: 189 WSFGILLTEI 198
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL F+ K P + KL L +A IA G+ ++ +H D++
Sbjct: 94 IITEYMENGSLVDFL--KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 146
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ + KI+DFGLA++ E + GA+ + + APE N+G + KSDV
Sbjct: 147 AANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFTIKSDV 203
Query: 168 YSYGMMVFEM 177
+S+G+++ E+
Sbjct: 204 WSFGILLTEI 213
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 10/142 (7%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
A++ ++ SL + H ET K + + L IA ARG++YLH I+H D+
Sbjct: 95 AIVTQWCEGSSL---YHHLHASET--KFEMKKLIDIARQTARGMDYLHAKS---IIHRDL 146
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVSYKS 165
K +NI L ED KI DFGLA G++ ++APEV ++ S++S
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 166 DVYSYGMMVFE-MTGVKNNANV 186
DVY++G++++E MTG +N+
Sbjct: 207 DVYAFGIVLYELMTGQLPYSNI 228
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S G L F+ E + L+ L +A IA G+ Y+ R +H D++
Sbjct: 89 IVMEYMSKGCLLDFLKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 198
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 199 WSFGILLTELT 209
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 10/142 (7%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
A++ ++ SL + H ET K + + L IA ARG++YLH I+H D+
Sbjct: 95 AIVTQWCEGSSL---YHHLHASET--KFEMKKLIDIARQTARGMDYLHAKS---IIHRDL 146
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVSYKS 165
K +NI L ED KI DFGLA G++ ++APEV ++ S++S
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 166 DVYSYGMMVFE-MTGVKNNANV 186
DVY++G++++E MTG +N+
Sbjct: 207 DVYAFGIVLYELMTGQLPYSNI 228
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++S G L F+ E + L+ L +A IA G+ Y+ R +H D++
Sbjct: 89 IVTEYMSKGCLLDFLKG----EMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ E+ K++DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL--YGRFTIKSDV 198
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+T
Sbjct: 199 WSFGILLTELT 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETN----------QKLKWEVLYKIAVGIARGLEYLHRGC 97
L E+ +G+L F+ + LET+ L + L A +ARG++YL +
Sbjct: 93 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-- 150
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ +H D+ NIL+ E++ KI+DFGL++ G+E V T R V ++A E N
Sbjct: 151 -KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESL--N 204
Query: 158 FGEVSYKSDVYSYGMMVFEMTGV 180
+ + SDV+SYG++++E+ +
Sbjct: 205 YSVYTTNSDVWSYGVLLWEIVSL 227
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP--LETN--------QKLKWEVLYKIAVGIA 87
G C + +I E+ S G+L +++ + P +E + +++ ++ L +A
Sbjct: 108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLA 167
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + + T R V
Sbjct: 168 RGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK 224
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 225 WMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSP----------------YPGIPV 265
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 266 EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETN----------QKLKWEVLYKIAVGIARGLEYLHRGC 97
L E+ +G+L F+ + LET+ L + L A +ARG++YL +
Sbjct: 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-- 160
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ +H D+ NIL+ E++ KI+DFGL++ G+E V T R V ++A E N
Sbjct: 161 -KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESL--N 214
Query: 158 FGEVSYKSDVYSYGMMVFEMTGV 180
+ + SDV+SYG++++E+ +
Sbjct: 215 YSVYTTNSDVWSYGVLLWEIVSL 237
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I EF++ GSL F+ + K+ L + IA G+ Y+ R +H D++
Sbjct: 84 IITEFMAKGSLLDFLKS----DEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLR 136
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
N+L+ E KI+DFGLA++ E + GA+ + + APE NFG + KS+V
Sbjct: 137 AANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NFGCFTIKSNV 193
Query: 168 YSYGMMVFEMT 178
+S+G++++E+
Sbjct: 194 WSFGILLYEIV 204
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP------LETNQKLKWEVLYKIAVG----IA 87
G C + +I E+ S G+L +++ + P + N+ + ++ +K V +A
Sbjct: 108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLA 167
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + + T R V
Sbjct: 168 RGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK 224
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 225 WMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSP----------------YPGIPV 265
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 266 EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP------LETNQKLKWEVLYKIAVG----IA 87
G C + +I E+ S G+L +++ + P + N+ + ++ +K V +A
Sbjct: 154 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLA 213
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + + T R V
Sbjct: 214 RGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 270
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 271 WMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSP----------------YPGIPV 311
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 312 EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAV--GIARGLEYLHRGCNTRILHFD 105
+I E++ NG+L+KF+ EK ++ VL + + GIA G++YL N +H D
Sbjct: 123 IITEYMENGALDKFLREKDG-------EFSVLQLVGMLRGIAAGMKYL---ANMNYVHRD 172
Query: 106 IKPHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYK 164
+ NIL++ + K+SDFGL+++ E+ + +G + + + APE ++ + +
Sbjct: 173 LAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI--SYRKFTSA 230
Query: 165 SDVYSYGMMVFEM 177
SDV+S+G++++E+
Sbjct: 231 SDVWSFGIVMWEV 243
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHR-------GCNTR 100
LI F GSL F L+ N + W L IA +ARGL YLH G
Sbjct: 99 LITAFHEKGSLSDF------LKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA 151
Query: 101 ILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF--CRNF 158
I H DIK N+LL + I+DFGLA +S G GT Y+APEV NF
Sbjct: 152 ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINF 211
Query: 159 GEVSY-KSDVYSYGMMVFEMTGVKNNANVAVD 189
++ + D+Y+ G++++E+ A+ VD
Sbjct: 212 QRDAFLRIDMYAMGLVLWELASRCTAADGPVD 243
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 112/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP------LETNQKLKWEVLYKIAVG----IA 87
G C + +I E+ S G+L +++ + P + N+ + ++ +K V +A
Sbjct: 108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLA 167
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + + + T R V
Sbjct: 168 RGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVK 224
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 225 WMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSP----------------YPGIPV 265
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 266 EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 48 LIYEFVSNGSL-EKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
++ EFV G L + + + HP+ KW V ++ + IA G+EY+ + N I+H D+
Sbjct: 98 MVMEFVPCGDLYHRLLDKAHPI------KWSVKLRLMLDIALGIEYM-QNQNPPIVHRDL 150
Query: 107 KPHNILL---DED--FCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEV 161
+ NI L DE+ C K++DFG ++ +S+ S++G G ++APE
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESY 205
Query: 162 SYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDK 221
+ K+D YS+ M+++ + + E F + Y +++ + +G+ +
Sbjct: 206 TEKADTYSFAMILYTIL------------TGEGPFDEYSYGKIKFINMIREEGLRPTIPE 253
Query: 222 EYARKMILVSLWCIQNNPSDRPAMNRVVEML 252
+ ++ V C +P RP + +V+ L
Sbjct: 254 DCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP------LETNQKLKWEVLYKIAVG----IA 87
G C + +I E+ S G+L +++ + P + N+ + ++ +K V +A
Sbjct: 97 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLA 156
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + + T R V
Sbjct: 157 RGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 213
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 214 WMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSP----------------YPGIPV 254
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 255 EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 303
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP------LETNQKLKWEVLYKIAVG----IA 87
G C + +I E+ S G+L +++ + P + N+ + ++ +K V +A
Sbjct: 95 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLA 154
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + + T R V
Sbjct: 155 RGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 211
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 212 WMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSP----------------YPGIPV 252
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 253 EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 301
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 14/131 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L+ E++ +L ++I PL + + + I G+++ H + RI+H DIK
Sbjct: 88 LVMEYIEGPTLSEYIESHGPLSVDTAINF------TNQILDGIKHAH---DMRIVHRDIK 138
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYK-SD 166
P NIL+D + KI DFG+AK S+ GTV Y +PE + GE + + +D
Sbjct: 139 PQNILIDSNKTLKIFDFGIAKAL-SETSLTQTNHVLGTVQYFSPE---QAKGEATDECTD 194
Query: 167 VYSYGMMVFEM 177
+YS G++++EM
Sbjct: 195 IYSIGIVLYEM 205
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP------LETNQKLKWEVLYKIAVG----IA 87
G C + +I E+ S G+L +++ + P + N+ + ++ +K V +A
Sbjct: 108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLA 167
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + + T R V
Sbjct: 168 RGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 225 WMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSP----------------YPGIPV 265
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 266 EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 18/135 (13%)
Query: 48 LIYEFVSNGSLEKFIYE----KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILH 103
+I EF++ GSL F+ K PL L + IA G+ ++ + +H
Sbjct: 86 IITEFMAKGSLLDFLKSDEGSKQPLPK--------LIDFSAQIAEGMAFIEQ---RNYIH 134
Query: 104 FDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSY 163
D++ NIL+ KI+DFGLA++ E + GA+ + + APE NFG +
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NFGSFTI 191
Query: 164 KSDVYSYGMMVFEMT 178
KSDV+S+G+++ E+
Sbjct: 192 KSDVWSFGILLMEIV 206
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP------LETNQKLKWEVLYKIAVG----IA 87
G C + +I E+ S G+L +++ + P + N+ + ++ +K V +A
Sbjct: 100 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLA 159
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + + T R V
Sbjct: 160 RGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 216
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 217 WMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSP----------------YPGIPV 257
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 258 EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 306
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP------LETNQKLKWEVLYKIAVG----IA 87
G C + +I E+ S G+L +++ + P + N+ + ++ +K V +A
Sbjct: 108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLA 167
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + + T R V
Sbjct: 168 RGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 225 WMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSP----------------YPGIPV 265
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 266 EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP------LETNQKLKWEVLYKIAVG----IA 87
G C + +I E+ S G+L +++ + P + N+ + ++ +K V +A
Sbjct: 108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLA 167
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + + T R V
Sbjct: 168 RGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 225 WMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSP----------------YPGIPV 265
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 266 EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 10/142 (7%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
A++ ++ SL + H +ET K + L IA A+G++YLH I+H D+
Sbjct: 107 AIVTQWCEGSSL---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 158
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVSYKS 165
K +NI L ED KI DFGLA G++ ++APEV ++ S++S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 166 DVYSYGMMVFE-MTGVKNNANV 186
DVY++G++++E MTG +N+
Sbjct: 219 DVYAFGIVLYELMTGQLPYSNI 240
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 10/142 (7%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
A++ ++ SL + H +ET K + L IA A+G++YLH I+H D+
Sbjct: 99 AIVTQWCEGSSL---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 150
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVSYKS 165
K +NI L ED KI DFGLA G++ ++APEV ++ S++S
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 210
Query: 166 DVYSYGMMVFE-MTGVKNNANV 186
DVY++G++++E MTG +N+
Sbjct: 211 DVYAFGIVLYELMTGQLPYSNI 232
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 48 LIYEFVSNGSL-EKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
++ EFV G L + + + HP+ KW V ++ + IA G+EY+ + N I+H D+
Sbjct: 98 MVMEFVPCGDLYHRLLDKAHPI------KWSVKLRLMLDIALGIEYM-QNQNPPIVHRDL 150
Query: 107 KPHNILL---DED--FCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEV 161
+ NI L DE+ C K++DF L++ +S+ S++G G ++APE
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESY 205
Query: 162 SYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDK 221
+ K+D YS+ M+++ + + E F + Y +++ + +G+ +
Sbjct: 206 TEKADTYSFAMILYTIL------------TGEGPFDEYSYGKIKFINMIREEGLRPTIPE 253
Query: 222 EYARKMILVSLWCIQNNPSDRPAMNRVVEML 252
+ ++ V C +P RP + +V+ L
Sbjct: 254 DCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 18/134 (13%)
Query: 48 LIYEFVSNGSLEKFIYE----KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILH 103
+I EF++ GSL F+ K PL L + IA G+ ++ + +H
Sbjct: 259 IITEFMAKGSLLDFLKSDEGSKQPLPK--------LIDFSAQIAEGMAFIEQ---RNYIH 307
Query: 104 FDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSY 163
D++ NIL+ KI+DFGLA++ E + GA+ + + APE NFG +
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NFGSFTI 364
Query: 164 KSDVYSYGMMVFEM 177
KSDV+S+G+++ E+
Sbjct: 365 KSDVWSFGILLMEI 378
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 10/142 (7%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
A++ ++ SL + H +ET K + L IA A+G++YLH I+H D+
Sbjct: 79 AIVTQWCEGSSL---YHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKS---IIHRDL 130
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVSYKS 165
K +NI L ED KI DFGLA G++ ++APEV ++ S++S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 166 DVYSYGMMVFE-MTGVKNNANV 186
DVY++G++++E MTG +N+
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNI 212
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETN----------QKLKWEVLYKIAVGIARGLEYLHRGC 97
L E+ +G+L F+ + LET+ L + L A +ARG++YL +
Sbjct: 100 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-- 157
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ +H ++ NIL+ E++ KI+DFGL++ G+E V T R V ++A E N
Sbjct: 158 -KQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESL--N 211
Query: 158 FGEVSYKSDVYSYGMMVFEMTGV 180
+ + SDV+SYG++++E+ +
Sbjct: 212 YSVYTTNSDVWSYGVLLWEIVSL 234
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL F+ K P + KL L +A IA G+ ++ +H +++
Sbjct: 80 IITEYMENGSLVDFL--KTP--SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNLR 132
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ + KI+DFGLA++ E + GA+ + + APE N+G + KSDV
Sbjct: 133 AANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NYGTFTIKSDV 189
Query: 168 YSYGMMVFEM 177
+S+G+++ E+
Sbjct: 190 WSFGILLTEI 199
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 22/171 (12%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEK-HPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + + ++ E++SNG L ++ LE +Q L E+ Y + G+A LE
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL--EMCYDVCEGMAF-LE----- 121
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ + +H D+ N L+D D C K+SDFG+ + + VS G + V + APEVF
Sbjct: 122 -SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPEVF-- 177
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-------NNANVA--VDRSSEIYFPH 198
++ + S KSDV+++G++++E+ + N+ V V + +Y PH
Sbjct: 178 HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPH 228
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 38/177 (21%)
Query: 28 VAIKVLNETKG------FCFEGHRRA--------------------LIYEFVSNGSLEKF 61
VAIK+LNET G F E A L+ + + +G L ++
Sbjct: 47 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEY 106
Query: 62 IYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPK 120
++E K + + L W V IA+G+ YL R++H D+ N+L+ K
Sbjct: 107 VHEHKDNIGSQLLLNW------CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVK 157
Query: 121 ISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
I+DFGLA++ G E + G + + ++A E C ++ + +++SDV+SYG+ ++E+
Sbjct: 158 ITDFGLARLLEGDEKEYNADGGKMPIKWMALE--CIHYRKFTHQSDVWSYGVTIWEL 212
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 37 KGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
+G G ++ EF+ NG+L+ F+ KH + + L + GIA G+ YL
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFL-RKH----DGQFTVIQLVGMLRGIAAGMRYL--- 161
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFC 155
+ +H D+ NIL++ + K+SDFGL+++ E++ + TG + V + APE
Sbjct: 162 ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI- 220
Query: 156 RNFGEVSYKSDVYSYGMMVFEM 177
+ + + SDV+SYG++++E+
Sbjct: 221 -QYRKFTSASDVWSYGIVMWEV 241
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 36/176 (20%)
Query: 28 VAIKVLNETKG------FCFEGHRRA--------------------LIYEFVSNGSLEKF 61
VAIK+LNET G F E A L+ + + +G L ++
Sbjct: 70 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEY 129
Query: 62 IYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKI 121
++E + ++L V IA+G+ YL R++H D+ N+L+ KI
Sbjct: 130 VHEH-----KDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKI 181
Query: 122 SDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
+DFGLA++ G E + G + + ++A E C ++ + +++SDV+SYG+ ++E+
Sbjct: 182 TDFGLARLLEGDEKEYNADGGKMPIKWMALE--CIHYRKFTHQSDVWSYGVTIWEL 235
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 111/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP------LETNQKLKWEVLYKIAVG----IA 87
G C + +I E+ S G+L +++ + P + N+ + ++ +K V +A
Sbjct: 108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLA 167
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ E+ +I+DFGLA+ + + T R V
Sbjct: 168 RGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 225 WMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSP----------------YPGIPV 265
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 266 EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 27/202 (13%)
Query: 51 EFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 110
E+ N +L I+ ++ L + W + +I L Y+H + I+H D+KP N
Sbjct: 95 EYCENRTLYDLIHSEN-LNQQRDEYWRLFRQIL----EALSYIH---SQGIIHRDLKPMN 146
Query: 111 ILLDEDFCPKISDFGLAKICHGRESIV------------SMTGARGTVGYIAPEVFCRNF 158
I +DE KI DFGLAK H I+ ++T A GT Y+A EV
Sbjct: 147 IFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL-DGT 205
Query: 159 GEVSYKSDVYSYGMMVFEM-----TGVKNNANVAVDRSSEIYF-PHWVYKRLELEEDLGL 212
G + K D+YS G++ FEM TG++ + RS I F P + ++++E+ +
Sbjct: 206 GHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIR 265
Query: 213 QGIENEEDKEYARKMILVSLWC 234
I+++ +K + +L S W
Sbjct: 266 LLIDHDPNKRPGARTLLNSGWL 287
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++ G+L ++ E + E VL +A I+ +EYL + +H D+
Sbjct: 105 IVTEYMPYGNLLDYLRECNREEVTAV----VLLYMATQISSAMEYLEK---KNFIHRDLA 157
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
N L+ E+ K++DFGL+++ G ++ + GA+ + + APE N S KSDV
Sbjct: 158 ARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYN--TFSIKSDV 214
Query: 168 YSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKM 227
+++G++++E+ + +D S VY LE +G E+ + K+
Sbjct: 215 WAFGVLLWEIATYGMSPYPGIDLSQ-------VYDLLE-------KGYRMEQPEGCPPKV 260
Query: 228 ILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ C + +P+DRP+ + E
Sbjct: 261 YELMRACWKWSPADRPSFAETHQAFE 286
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E+++ GSL F+ + + LK L +A +A G+ Y+ R +H D++
Sbjct: 80 IVTEYMNKGSLLDFLKDGE----GRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLR 132
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
NIL+ KI+DFGLA++ E + GA+ + + APE +G + KSDV
Sbjct: 133 SANILVGNGLICKIADFGLARLIEDNEX-TARQGAKFPIKWTAPEAAL--YGRFTIKSDV 189
Query: 168 YSYGMMVFEMT 178
+S+G+++ E+
Sbjct: 190 WSFGILLTELV 200
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 34/222 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGC 97
+I EF G+L ++ K N+ + ++ LYK + +A+G+E+L
Sbjct: 109 VIVEFCKFGNLSTYLRSKR----NEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---A 161
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCR 156
+ + +H D+ NILL E KI DFGLA+ + V AR + ++APE +F R
Sbjct: 162 SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 221
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIE 216
+ + +SDV+S+G++++E+ + + V E +RL+ +G
Sbjct: 222 VY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------XRRLK-------EGTR 265
Query: 217 NEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSLDS 258
+M L C PS RP + +VE L L +
Sbjct: 266 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 307
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 110/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP------LETNQKLKWEVLYKIAVG----IA 87
G C + +I + S G+L +++ + P + N+ + ++ +K V +A
Sbjct: 108 GACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLA 167
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + + T R V
Sbjct: 168 RGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 225 WMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSP----------------YPGIPV 265
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 266 EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGC 97
+I EF G+L ++ K K+ E LYK + +A+G+E+L
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---A 165
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCR 156
+ + +H D+ NILL E KI DFGLA+ + V AR + ++APE +F R
Sbjct: 166 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDR 225
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIE 216
+ + +SDV+S+G++++E+ + + V E +RL+ +G
Sbjct: 226 VY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTR 269
Query: 217 NEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSLDS 258
+M L C PS RP + +VE L L +
Sbjct: 270 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGC 97
+I EF G+L ++ K K+ E LYK + +A+G+E+L
Sbjct: 146 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---A 202
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCR 156
+ + +H D+ NILL E KI DFGLA+ + V AR + ++APE +F R
Sbjct: 203 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 262
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIE 216
+ + +SDV+S+G++++E+ + + V E +RL+ +G
Sbjct: 263 VY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTR 306
Query: 217 NEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSLDS 258
+M L C PS RP + +VE L L +
Sbjct: 307 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGC 97
+I EF G+L ++ K K+ E LYK + +A+G+E+L
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---A 165
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCR 156
+ + +H D+ NILL E KI DFGLA+ + V AR + ++APE +F R
Sbjct: 166 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 225
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIE 216
+ + +SDV+S+G++++E+ + + V E +RL+ +G
Sbjct: 226 VY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTR 269
Query: 217 NEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSLDS 258
+M L C PS RP + +VE L L +
Sbjct: 270 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGC 97
+I EF G+L ++ K K+ E LYK + +A+G+E+L
Sbjct: 100 VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---A 156
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCR 156
+ + +H D+ NILL E KI DFGLA+ + V AR + ++APE +F R
Sbjct: 157 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 216
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIE 216
+ + +SDV+S+G++++E+ + + V E +RL+ +G
Sbjct: 217 VY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTR 260
Query: 217 NEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSLDS 258
+M L C PS RP + +VE L L +
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGC 97
+I EF G+L ++ K K+ E LYK + +A+G+E+L
Sbjct: 100 VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---A 156
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCR 156
+ + +H D+ NILL E KI DFGLA+ + V AR + ++APE +F R
Sbjct: 157 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 216
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIE 216
+ + +SDV+S+G++++E+ + + V E +RL+ +G
Sbjct: 217 VY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTR 260
Query: 217 NEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSLDS 258
+M L C PS RP + +VE L L +
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 110/229 (48%), Gaps = 35/229 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP------LETNQKLKWEVLYKIAVG----IA 87
G C + +I + S G+L +++ + P + N+ + ++ +K V +A
Sbjct: 108 GACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLA 167
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
RG+EYL + + +H D+ N+L+ E+ KI+DFGLA+ + + T R V
Sbjct: 168 RGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLEL 206
++APE +F R + +++SDV+S+G++++E+ + + Y + +
Sbjct: 225 WMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSP----------------YPGIPV 265
Query: 207 EEDLGL--QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
EE L +G ++ ++ ++ C PS RP ++VE L+
Sbjct: 266 EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 34/222 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGC 97
+I EF G+L ++ K N+ + ++ LYK + +A+G+E+L
Sbjct: 109 VIVEFCKFGNLSTYLRSKR----NEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---A 161
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCR 156
+ + +H D+ NILL E KI DFGLA+ + V AR + ++APE +F R
Sbjct: 162 SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 221
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIE 216
+ + +SDV+S+G++++E+ + + V E +RL+ +G
Sbjct: 222 VY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTR 265
Query: 217 NEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSLDS 258
+M L C PS RP + +VE L L +
Sbjct: 266 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 307
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGC 97
+I EF G+L ++ K K+ E LYK + +A+G+E+L
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---A 165
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCR 156
+ + +H D+ NILL E KI DFGLA+ V AR + ++APE +F R
Sbjct: 166 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR 225
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIE 216
+ + +SDV+S+G++++E+ + + V E +RL+ +G
Sbjct: 226 VY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTR 269
Query: 217 NEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSLDS 258
+M L C PS RP + +VE L L +
Sbjct: 270 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 62/94 (65%), Gaps = 11/94 (11%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAK--ICHGRESIVSMTGAR 143
+A GL++LH + I++ D+KP NILLDE+ K++DFGL+K I H +++
Sbjct: 139 LALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC---- 191
Query: 144 GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GTV Y+APEV R G S+ +D +SYG+++FEM
Sbjct: 192 GTVEYMAPEVVNRQ-GH-SHSADWWSYGVLMFEM 223
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGC 97
+I EF G+L ++ K K+ E LYK + +A+G+E+L
Sbjct: 100 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---A 156
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCR 156
+ + +H D+ NILL E KI DFGLA+ V AR + ++APE +F R
Sbjct: 157 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR 216
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIE 216
+ + +SDV+S+G++++E+ + + V E +RL+ +G
Sbjct: 217 VY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTR 260
Query: 217 NEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSLDS 258
+M L C PS RP + +VE L L +
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGC 97
+I EF G+L ++ K K+ E LYK + +A+G+E+L
Sbjct: 100 VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---A 156
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCR 156
+ + +H D+ NILL E KI DFGLA+ V AR + ++APE +F R
Sbjct: 157 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR 216
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIE 216
+ + +SDV+S+G++++E+ + + V E +RL+ +G
Sbjct: 217 VY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTR 260
Query: 217 NEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSLDS 258
+M L C PS RP + +VE L L +
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL+ F+ + + + L + GI G++YL + +H D+
Sbjct: 107 IITEYMENGSLDAFLRK-----NDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLA 158
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFG++++ E+ + G + + + APE + + + SD
Sbjct: 159 ARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA--YRKFTSASD 216
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN------EED 220
V+SYG++++E+ P+W ++ ++ IE D
Sbjct: 217 VWSYGIVMWEVMSYGER-------------PYW-----DMSNQDVIKAIEEGYRLPPPMD 258
Query: 221 KEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
A +++ W Q SDRP ++V ML+
Sbjct: 259 CPIALHQLMLDCW--QKERSDRPKFGQIVNMLD 289
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C E L+ E G L K+ L+ N+ +K + + ++ ++ G++YL
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKY------LQQNRHVKDKNIIELVHQVSMGMKYLEE-- 145
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV-SMTGARGTVGYIAPEVFCR 156
+ +H D+ N+LL KISDFGL+K E+ + T + V + APE C
Sbjct: 146 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE--CI 202
Query: 157 NFGEVSYKSDVYSYGMMVFE 176
N+ + S KSDV+S+G++++E
Sbjct: 203 NYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C E L+ E G L K+ L+ N+ +K + + ++ ++ G++YL
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKY------LQQNRHVKDKNIIELVHQVSMGMKYLEE-- 145
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV-SMTGARGTVGYIAPEVFCR 156
+ +H D+ N+LL KISDFGL+K E+ + T + V + APE C
Sbjct: 146 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE--CI 202
Query: 157 NFGEVSYKSDVYSYGMMVFE 176
N+ + S KSDV+S+G++++E
Sbjct: 203 NYYKFSSKSDVWSFGVLMWE 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C E L+ E G L K+ L+ N+ +K + + ++ ++ G++YL
Sbjct: 93 GIC-EAESWMLVMEMAELGPLNKY------LQQNRHVKDKNIIELVHQVSMGMKYLEE-- 143
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV-SMTGARGTVGYIAPEVFCR 156
+ +H D+ N+LL KISDFGL+K E+ + T + V + APE C
Sbjct: 144 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE--CI 200
Query: 157 NFGEVSYKSDVYSYGMMVFE 176
N+ + S KSDV+S+G++++E
Sbjct: 201 NYYKFSSKSDVWSFGVLMWE 220
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYK----------IAVGIARGLEYLHRGC 97
+I EF G+L ++ K K E LYK + +A+G+E+L
Sbjct: 111 VIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---A 167
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCR 156
+ + +H D+ NILL E KI DFGLA+ + V AR + ++APE +F R
Sbjct: 168 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 227
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIE 216
+ + +SDV+S+G++++E+ + + V E +RL+ +G
Sbjct: 228 VY---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTR 271
Query: 217 NEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSLDS 258
+M L C PS RP + +VE L L +
Sbjct: 272 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 313
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 29/221 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKH----PLETNQKL-----KWEVLYKIAVGIARGLEYLHRGCN 98
+I EF G+L ++ K P +T + L E L + +A+G+E+L +
Sbjct: 110 VIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---AS 166
Query: 99 TRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCRN 157
+ +H D+ NILL E KI DFGLA+ V AR + ++APE +F R
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN 217
+ + +SDV+S+G++++E+ + + V E +RL+ +G
Sbjct: 227 Y---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTRM 270
Query: 218 EEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSLDS 258
+M L C PS RP + +VE L L +
Sbjct: 271 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C E L+ E G L K+ L+ N+ +K + + ++ ++ G++YL
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKY------LQQNRHVKDKNIIELVHQVSMGMKYLEE-- 135
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV-SMTGARGTVGYIAPEVFCR 156
+ +H D+ N+LL KISDFGL+K E+ + T + V + APE C
Sbjct: 136 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE--CI 192
Query: 157 NFGEVSYKSDVYSYGMMVFE 176
N+ + S KSDV+S+G++++E
Sbjct: 193 NYYKFSSKSDVWSFGVLMWE 212
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C E L+ E G L K+ L+ N+ +K + + ++ ++ G++YL
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKY------LQQNRHVKDKNIIELVHQVSMGMKYLEE-- 129
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV-SMTGARGTVGYIAPEVFCR 156
+ +H D+ N+LL KISDFGL+K E+ + T + V + APE C
Sbjct: 130 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE--CI 186
Query: 157 NFGEVSYKSDVYSYGMMVFE 176
N+ + S KSDV+S+G++++E
Sbjct: 187 NYYKFSSKSDVWSFGVLMWE 206
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 43/217 (19%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I EF+ NGSL+ F+ + + + L + GIA G++YL + +H D+
Sbjct: 111 IITEFMENGSLDSFLRQ-----NDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLA 162
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG---TVGYIAPEVFCRNFGEVSYK 164
NIL++ + K+SDFGL++ S + T A G + + APE + + +
Sbjct: 163 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI--QYRKFTSA 220
Query: 165 SDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY- 223
SDV+SYG++++E+ P+W D+ Q + N +++Y
Sbjct: 221 SDVWSYGIVMWEVMSYGER-------------PYW---------DMTNQDVINAIEQDYR 258
Query: 224 -------ARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + + RP ++V L+
Sbjct: 259 LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 295
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL+ F+ + + + L + GI G++YL + +H D+
Sbjct: 92 IITEYMENGSLDAFLRK-----NDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLA 143
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFG++++ E+ + G + + + APE + + + SD
Sbjct: 144 ARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA--YRKFTSASD 201
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN------EED 220
V+SYG++++E+ P+W ++ ++ IE D
Sbjct: 202 VWSYGIVMWEVMSYGER-------------PYW-----DMSNQDVIKAIEEGYRLPPPMD 243
Query: 221 KEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
A +++ W Q SDRP ++V ML+
Sbjct: 244 CPIALHQLMLDCW--QKERSDRPKFGQIVNMLD 274
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++ NGSL+ F+ KH + + L + GIA G++YL + +H D+
Sbjct: 123 IVTEYMENGSLDSFL-RKH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFGLA++ E+ + G + + + +PE + + + SD
Sbjct: 175 ARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASD 232
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
V+SYG++++E+ P+W ++ + + +G +
Sbjct: 233 VWSYGIVLWEVMSYGER-------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAA 278
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + ++RP ++V +L+
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C E L+ E G L K+ L+ N+ +K + + ++ ++ G++YL
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKY------LQQNRHVKDKNIIELVHQVSMGMKYLEE-- 129
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV-SMTGARGTVGYIAPEVFCR 156
+ +H D+ N+LL KISDFGL+K E+ + T + V + APE C
Sbjct: 130 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE--CI 186
Query: 157 NFGEVSYKSDVYSYGMMVFE 176
N+ + S KSDV+S+G++++E
Sbjct: 187 NYYKFSSKSDVWSFGVLMWE 206
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C E L+ E G L K+ L+ N+ +K + + ++ ++ G++YL
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKY------LQQNRHVKDKNIIELVHQVSMGMKYLEE-- 123
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV-SMTGARGTVGYIAPEVFCR 156
+ +H D+ N+LL KISDFGL+K E+ + T + V + APE C
Sbjct: 124 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE--CI 180
Query: 157 NFGEVSYKSDVYSYGMMVFE 176
N+ + S KSDV+S+G++++E
Sbjct: 181 NYYKFSSKSDVWSFGVLMWE 200
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C E L+ E G L K+ L+ N+ +K + + ++ ++ G++YL
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKY------LQQNRHVKDKNIIELVHQVSMGMKYLEE-- 125
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV-SMTGARGTVGYIAPEVFCR 156
+ +H D+ N+LL KISDFGL+K E+ + T + V + APE C
Sbjct: 126 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE--CI 182
Query: 157 NFGEVSYKSDVYSYGMMVFE 176
N+ + S KSDV+S+G++++E
Sbjct: 183 NYYKFSSKSDVWSFGVLMWE 202
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ NGSL+ F+ + + + L + GI G++YL + +H D+
Sbjct: 86 IITEYMENGSLDAFLRK-----NDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLA 137
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFG++++ E+ + G + + + APE + + + SD
Sbjct: 138 ARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA--YRKFTSASD 195
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIEN------EED 220
V+SYG++++E+ P+W ++ ++ IE D
Sbjct: 196 VWSYGIVMWEVMSYGER-------------PYW-----DMSNQDVIKAIEEGYRLPPPMD 237
Query: 221 KEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
A +++ W Q SDRP ++V ML+
Sbjct: 238 CPIALHQLMLDCW--QKERSDRPKFGQIVNMLD 268
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C E L+ E G L K+ L+ N+ +K + + ++ ++ G++YL
Sbjct: 437 GIC-EAESWMLVMEMAELGPLNKY------LQQNRHVKDKNIIELVHQVSMGMKYLEE-- 487
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV-SMTGARGTVGYIAPEVFCR 156
+ +H D+ N+LL KISDFGL+K E+ + T + V + APE C
Sbjct: 488 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE--CI 544
Query: 157 NFGEVSYKSDVYSYGMMVFE 176
N+ + S KSDV+S+G++++E
Sbjct: 545 NYYKFSSKSDVWSFGVLMWE 564
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 28/134 (20%)
Query: 48 LIYEFVSNGSLEKFIYE----KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILH 103
+I EF++ GSL F+ K PL L + IA G+ ++ + +H
Sbjct: 253 IITEFMAKGSLLDFLKSDEGSKQPLPK--------LIDFSAQIAEGMAFIEQ---RNYIH 301
Query: 104 FDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSY 163
D++ NIL+ KI+DFGLA++ GA+ + + APE NFG +
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARV-----------GAKFPIKWTAPEAI--NFGSFTI 348
Query: 164 KSDVYSYGMMVFEM 177
KSDV+S+G+++ E+
Sbjct: 349 KSDVWSFGILLMEI 362
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C E L+ E G L K+ L+ N+ +K + + ++ ++ G++YL
Sbjct: 438 GIC-EAESWMLVMEMAELGPLNKY------LQQNRHVKDKNIIELVHQVSMGMKYLEE-- 488
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV-SMTGARGTVGYIAPEVFCR 156
+ +H D+ N+LL KISDFGL+K E+ + T + V + APE C
Sbjct: 489 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE--CI 545
Query: 157 NFGEVSYKSDVYSYGMMVFE 176
N+ + S KSDV+S+G++++E
Sbjct: 546 NYYKFSSKSDVWSFGVLMWE 565
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 21/203 (10%)
Query: 52 FVSNGSLEKFIYEKHPLETNQK-LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 110
FV SL E+ P + + L E L + +A+G+E+L + + +H D+ N
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 228
Query: 111 ILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCRNFGEVSYKSDVYS 169
ILL E KI DFGLA+ + V AR + ++APE +F R + + +SDV+S
Sbjct: 229 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWS 285
Query: 170 YGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMIL 229
+G++++E+ + + V E +RL+ +G +M
Sbjct: 286 FGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTRMRAPDYTTPEMYQ 332
Query: 230 VSLWCIQNNPSDRPAMNRVVEML 252
L C PS RP + +VE L
Sbjct: 333 TMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 52 FVSNGSLEKFIYEKHPLETNQK-LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 110
FV SL E+ P + + L E L + +A+G+E+L + + +H D+ N
Sbjct: 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 223
Query: 111 ILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCRNFGEVSYKSDVYS 169
ILL E KI DFGLA+ + V AR + ++APE +F R + + +SDV+S
Sbjct: 224 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWS 280
Query: 170 YGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMIL 229
+G++++E+ + + V E +RL+ +G +M
Sbjct: 281 FGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTRMRAPDYTTPEMYQ 327
Query: 230 VSLWCIQNNPSDRPAMNRVVEMLEGSLDS 258
L C PS RP + +VE L L +
Sbjct: 328 TMLDCWHGEPSQRPTFSELVEHLGNLLQA 356
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 21/203 (10%)
Query: 52 FVSNGSLEKFIYEKHPLETNQK-LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 110
FV SL E+ P + + L E L + +A+G+E+L + + +H D+ N
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 230
Query: 111 ILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCRNFGEVSYKSDVYS 169
ILL E KI DFGLA+ + V AR + ++APE +F R + + +SDV+S
Sbjct: 231 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWS 287
Query: 170 YGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMIL 229
+G++++E+ + + V E +RL+ +G +M
Sbjct: 288 FGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTRMRAPDYTTPEMYQ 334
Query: 230 VSLWCIQNNPSDRPAMNRVVEML 252
L C PS RP + +VE L
Sbjct: 335 TMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 26/180 (14%)
Query: 77 EVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESI 136
E L + +ARG+E+L + + +H D+ NILL E+ KI DFGLA+ +
Sbjct: 199 EDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 137 VSMTGARGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIY 195
V R + ++APE +F + + S KSDV+SYG++++E+ + +
Sbjct: 256 VRKGDTRLPLKWMAPESIFDKIY---STKSDVWSYGVLLWEIFSLGGSP----------- 301
Query: 196 FPHWVYKRLELEEDLG---LQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEML 252
Y ++++ED +G+ + ++ + L C +P +RP +VE L
Sbjct: 302 -----YPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++ NGSL+ F+ KH + + L + GIA G++YL + +H D+
Sbjct: 123 IVTEYMENGSLDSFL-RKH----DAQFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLA 174
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFGL+++ E+ + G + + + +PE + + + SD
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASD 232
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
V+SYG++++E+ P+W ++ + + +G +
Sbjct: 233 VWSYGIVLWEVMSYGER-------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAA 278
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + ++RP ++V +L+
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 52 FVSNGSLEKFIYEKHPLETNQK-LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 110
FV SL E+ P + + L E L + +A+G+E+L + + +H D+ N
Sbjct: 165 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 221
Query: 111 ILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCRNFGEVSYKSDVYS 169
ILL E KI DFGLA+ + V AR + ++APE +F R + + +SDV+S
Sbjct: 222 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWS 278
Query: 170 YGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMIL 229
+G++++E+ + + V E +RL+ +G +M
Sbjct: 279 FGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTRMRAPDYTTPEMYQ 325
Query: 230 VSLWCIQNNPSDRPAMNRVVEMLEGSLDS 258
L C PS RP + +VE L L +
Sbjct: 326 TMLDCWHGEPSQRPTFSELVEHLGNLLQA 354
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI EF+ GSL +++ +KH +++ L + I +G+EYL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYL-QKH----KERIDHIKLLQYTSQICKGMEYL- 133
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H D+ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 192 LTES--KFSVASDVWSFGVVLYEL 213
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 37 KGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
+G G ++ E++ NGSL+ F+ + + L + G+ G+ YL
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTH-----DGQFTIMQLVGMLRGVGAGMRYL--- 167
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFC 155
+ +H D+ N+L+D + K+SDFGL+++ ++ + TG + + + APE
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA 227
Query: 156 RNFGEVSYKSDVYSYGMMVFEM 177
F S SDV+S+G++++E+
Sbjct: 228 --FRTFSSASDVWSFGVVMWEV 247
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 65 KHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 124
++ L+ N K E + + L+YL N RI+H D+KP NILLDE I+DF
Sbjct: 103 RYHLQQNVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDF 159
Query: 125 GLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGE-VSYKSDVYSYGMMVFEM 177
+A + I +M GT Y+APE+F G S+ D +S G+ +E+
Sbjct: 160 NIAAMLPRETQITTMA---GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYEL 210
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 37 KGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
+G G ++ E++ NGSL+ F+ + + L + G+ G+ YL
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTH-----DGQFTIMQLVGMLRGVGAGMRYL--- 167
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFC 155
+ +H D+ N+L+D + K+SDFGL+++ ++ + TG + + + APE
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227
Query: 156 RNFGEVSYKSDVYSYGMMVFEM 177
F S SDV+S+G++++E+
Sbjct: 228 --FRTFSSASDVWSFGVVMWEV 247
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPL---ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILH 103
LI E VS G L F+ EK L E Q LK I G+ YLH + RI H
Sbjct: 84 VLILELVSGGELFDFLAEKESLTEDEATQFLKQ---------ILDGVHYLH---SKRIAH 131
Query: 104 FDIKPHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNF 158
FD+KP NI+L + P K+ DFG+A KI G E GT ++APE+ N+
Sbjct: 132 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE----FKNIFGTPEFVAPEIV--NY 185
Query: 159 GEVSYKSDVYSYGMMVF 175
+ ++D++S G++ +
Sbjct: 186 EPLGLEADMWSIGVITY 202
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 27 NVAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVG 85
N++ + L + G C + +I E+++NG L ++ E +H +T Q L ++
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ------LLEMCKD 128
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +EYL + + LH D+ N L+++ K+SDFGL++ E S G++
Sbjct: 129 VCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE-TSSVGSKFP 184
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
V + PEV + + S KSD++++G++++E+
Sbjct: 185 VRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 214
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++ NGSL+ F+ KH + + L + GIA G++YL + +H D+
Sbjct: 123 IVTEYMENGSLDSFL-RKH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFGL+++ E+ + G + + + +PE + + + SD
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASD 232
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
V+SYG++++E+ P+W ++ + + +G +
Sbjct: 233 VWSYGIVLWEVMSYGER-------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAA 278
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + ++RP ++V +L+
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++ NGSL+ F+ KH + + L + GIA G++YL + +H D+
Sbjct: 123 IVTEYMENGSLDSFL-RKH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFGL+++ E+ + G + + + +PE + + + SD
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASD 232
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
V+SYG++++E+ P+W ++ + + +G +
Sbjct: 233 VWSYGIVLWEVMSYGER-------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAA 278
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + ++RP ++V +L+
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++ NGSL+ F+ KH + + L + GIA G++YL + +H D+
Sbjct: 123 IVTEYMENGSLDSFL-RKH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFGL+++ E+ + G + + + +PE + + + SD
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASD 232
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
V+SYG++++E+ P+W ++ + + +G +
Sbjct: 233 VWSYGIVLWEVMSYGER-------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAA 278
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + ++RP ++V +L+
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++ NGSL+ F+ KH + + L + GIA G++YL + +H D+
Sbjct: 123 IVTEYMENGSLDSFL-RKH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFGL+++ E+ + G + + + +PE + + + SD
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASD 232
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
V+SYG++++E+ P+W ++ + + +G +
Sbjct: 233 VWSYGIVLWEVMSYGER-------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAA 278
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + ++RP ++V +L+
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G++YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKYL-- 148
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 208 LQTQ--KFTTKSDVWSFGVLLWEL 229
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ S SD+++ G +++++
Sbjct: 198 AQYVSPELLTEK--SASKSSDLWALGCIIYQLVA 229
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 111/244 (45%), Gaps = 29/244 (11%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++ NGSL+ F+ KH + + L + GIA G++YL + +H D+
Sbjct: 94 IVTEYMENGSLDSFL-RKH----DAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLA 145
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFGL+++ E+ + G + + + +PE + + + SD
Sbjct: 146 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASD 203
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
V+SYG++++E+ P+W ++ + + +G +
Sbjct: 204 VWSYGIVLWEVMSYGER-------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAA 249
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLEGSLDSLRIPPRPFLLSSGSQPDSSGTLVRQTEP 286
+ + L C Q + ++RP ++V + LD L P + + + S L+ Q+
Sbjct: 250 LYQLMLDCWQKDRNNRPKFEQIVSI----LDKLIRNPGSLKIITSAAARPSNLLLDQSNV 305
Query: 287 SMAT 290
+ T
Sbjct: 306 DITT 309
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++ NGSL+ F+ KH + + L + GIA G++YL + +H D+
Sbjct: 121 IVTEYMENGSLDSFL-RKH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLA 172
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFGL+++ E+ + G + + + +PE + + + SD
Sbjct: 173 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASD 230
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
V+SYG++++E+ P+W ++ + + +G +
Sbjct: 231 VWSYGIVLWEVMSYGER-------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAA 276
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + ++RP ++V +L+
Sbjct: 277 LYQLMLDCWQKDRNNRPKFEQIVSILD 303
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPL---ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILH 103
LI E VS G L F+ EK L E Q LK I G+ YLH + RI H
Sbjct: 105 VLILELVSGGELFDFLAEKESLTEDEATQFLKQ---------ILDGVHYLH---SKRIAH 152
Query: 104 FDIKPHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNF 158
FD+KP NI+L + P K+ DFG+A KI G E GT ++APE+ N+
Sbjct: 153 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE----FKNIFGTPEFVAPEIV--NY 206
Query: 159 GEVSYKSDVYSYGMMVF 175
+ ++D++S G++ +
Sbjct: 207 EPLGLEADMWSIGVITY 223
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPL---ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILH 103
LI E VS G L F+ EK L E Q LK I G+ YLH + RI H
Sbjct: 91 VLILELVSGGELFDFLAEKESLTEDEATQFLKQ---------ILDGVHYLH---SKRIAH 138
Query: 104 FDIKPHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNF 158
FD+KP NI+L + P K+ DFG+A KI G E GT ++APE+ N+
Sbjct: 139 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE----FKNIFGTPEFVAPEIV--NY 192
Query: 159 GEVSYKSDVYSYGMMVF 175
+ ++D++S G++ +
Sbjct: 193 EPLGLEADMWSIGVITY 209
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++ NGSL+ F+ KH + + L + GIA G++YL + +H D+
Sbjct: 111 IVTEYMENGSLDSFL-RKH----DAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLA 162
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFGL+++ E+ + G + + + +PE + + + SD
Sbjct: 163 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASD 220
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
V+SYG++++E+ P+W ++ + + +G +
Sbjct: 221 VWSYGIVLWEVMSYGER-------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAA 266
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + ++RP ++V +L+
Sbjct: 267 LYQLMLDCWQKDRNNRPKFEQIVSILD 293
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 28/214 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKH-------PLETNQK-LKWEVLYKIAVGIARGLEYLHRGCNT 99
+I EF G+L ++ K P + + L E L + +A+G+E+L +
Sbjct: 111 VIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASR 167
Query: 100 RILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCRNF 158
+ +H D+ NILL E KI DFGLA+ V AR + ++APE +F R +
Sbjct: 168 KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY 227
Query: 159 GEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENE 218
+ +SDV+S+G++++E+ + + V E +RL+ +G
Sbjct: 228 ---TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------CRRLK-------EGTRMR 271
Query: 219 EDKEYARKMILVSLWCIQNNPSDRPAMNRVVEML 252
+M L C PS RP + +VE L
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHR--------GCNT 99
LI F GSL ++ + W L +A ++RGL YLH G
Sbjct: 90 LITAFHDKGSLTDYL-------KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKP 142
Query: 100 RILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF--CRN 157
I H D K N+LL D ++DFGLA + G GT Y+APEV N
Sbjct: 143 SIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAIN 202
Query: 158 FGEVSY-KSDVYSYGMMVFEMTGVKNNANVAVD 189
F ++ + D+Y+ G++++E+ A+ VD
Sbjct: 203 FQRDAFLRIDMYAMGLVLWELVSRCKAADGPVD 235
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G++YL
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKYL-- 167
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 227 LQTQ--KFTTKSDVWSFGVLLWEL 248
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 85/156 (54%), Gaps = 15/156 (9%)
Query: 26 RNVAIKVLNETKGFCFE--GHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKI 82
RN+ + + + KG C E G+ LI EF+ +GSL++++ + K+ + Q+LK+
Sbjct: 66 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY------ 119
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
AV I +G++YL + + +H D+ N+L++ + KI DFGL K + ++
Sbjct: 120 AVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDD 176
Query: 143 RGT-VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + V + APE C + SDV+S+G+ + E+
Sbjct: 177 RDSPVFWYAPE--CLMQSKFYIASDVWSFGVTLHEL 210
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 85/156 (54%), Gaps = 15/156 (9%)
Query: 26 RNVAIKVLNETKGFCFE--GHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKI 82
RN+ + + + KG C E G+ LI EF+ +GSL++++ + K+ + Q+LK+
Sbjct: 78 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY------ 131
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
AV I +G++YL + + +H D+ N+L++ + KI DFGL K + ++
Sbjct: 132 AVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDD 188
Query: 143 RGT-VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + V + APE C + SDV+S+G+ + E+
Sbjct: 189 RDSPVFWYAPE--CLMQSKFYIASDVWSFGVTLHEL 222
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G++YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKYL-- 149
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 209 LQTQ--KFTTKSDVWSFGVLLWEL 230
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 98/207 (47%), Gaps = 25/207 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++ NGSL+ F+ KH + + L + GIA G++YL + +H D+
Sbjct: 123 IVTEYMENGSLDSFL-RKH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFGL ++ E+ + G + + + +PE + + + SD
Sbjct: 175 ARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASD 232
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
V+SYG++++E+ P+W ++ + + +G +
Sbjct: 233 VWSYGIVLWEVMSYGER-------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAA 278
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + ++RP ++V +L+
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 27 NVAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVG 85
N++ + L + G C + +I E+++NG L ++ E +H +T Q L ++
Sbjct: 59 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ------LLEMCKD 112
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +EYL + + LH D+ N L+++ K+SDFGL++ E S G++
Sbjct: 113 VCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFP 168
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
V + PEV + + S KSD++++G++++E+
Sbjct: 169 VRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 198
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G++YL
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKYL-- 141
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 201 LQTQ--KFTTKSDVWSFGVLLWEL 222
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 27 NVAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVG 85
N++ + L + G C + +I E+++NG L ++ E +H +T Q L ++
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ------LLEMCKD 128
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +EYL + + LH D+ N L+++ K+SDFGL++ E S G++
Sbjct: 129 VCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFP 184
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
V + PEV + + S KSD++++G++++E+
Sbjct: 185 VRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 214
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G++YL
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKYL-- 168
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 228 LQTQ--KFTTKSDVWSFGVLLWEL 249
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 27 NVAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVG 85
N++ + L + G C + +I E+++NG L ++ E +H +T Q L ++
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ------LLEMCKD 113
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +EYL + + LH D+ N L+++ K+SDFGL++ E S G++
Sbjct: 114 VCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFP 169
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
V + PEV + + S KSD++++G++++E+
Sbjct: 170 VRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 199
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G++YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKYL-- 148
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 208 LQTQ--KFTTKSDVWSFGVLLWEL 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G++YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKYL-- 149
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 209 LQTQ--KFTTKSDVWSFGVLLWEL 230
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 27 NVAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVG 85
N++ + L + G C + +I E+++NG L ++ E +H +T Q L ++
Sbjct: 55 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ------LLEMCKD 108
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +EYL + + LH D+ N L+++ K+SDFGL++ E S G++
Sbjct: 109 VCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFP 164
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
V + PEV + + S KSD++++G++++E+
Sbjct: 165 VRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 194
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G++YL
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKYL-- 146
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 206 LQTQ--KFTTKSDVWSFGVLLWEL 227
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G++YL
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKYL-- 147
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 207 LQTQ--KFTTKSDVWSFGVLLWEL 228
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 26/200 (13%)
Query: 55 NGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 114
+ SL+KF K ++ Q + ++L KIAV I + LE+LH + ++H D+KP N+L++
Sbjct: 133 DTSLDKFY--KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLIN 188
Query: 115 EDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSY--KSDVYSYGM 172
K+ DFG++ V+ T G Y+APE + Y KSD++S G+
Sbjct: 189 ALGQVKMCDFGISGYLVDS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGI 245
Query: 173 MVFEMTGVKNNANVAVDRSSEIYFPH--WVYKRLELEEDLGLQGIENEEDKEYARKMILV 230
+ E+ ++ FP+ W +L++ + + DK ++ + +
Sbjct: 246 TMIELAILR--------------FPYDSWGTPFQQLKQVVEEPSPQLPADK-FSAEFVDF 290
Query: 231 SLWCIQNNPSDRPAMNRVVE 250
+ C++ N +RP +++
Sbjct: 291 TSQCLKKNSKERPTYPELMQ 310
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
LI E VS G L F+ +K L + + I G+ YLH +I HFD+
Sbjct: 91 VLILELVSGGELFDFLAQKESLSEEEATSF------IKQILDGVNYLH---TKKIAHFDL 141
Query: 107 KPHNILLDEDFCP----KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
KP NI+L + P K+ DFGLA H E V GT ++APE+ N+ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFKNIFGTPEFVAPEIV--NYEPLG 196
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 197 LEADMWSIGVITY 209
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E++ NGSL+ F+ + + + L + GI+ G++YL + +H D+
Sbjct: 100 IVTEYMENGSLDTFLKK-----NDGQFTVIQLVGMLRGISAGMKYL---SDMGYVHRDLA 151
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFGL+++ E+ + G + + + APE F + + SD
Sbjct: 152 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA--FRKFTSASD 209
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
V+SYG++++E+ P+W ++ + + +G +
Sbjct: 210 VWSYGIVMWEVVSYGER-------------PYWEMTNQDVIKAVE-EGYRLPSPMDCPAA 255
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + RP + +V ML+
Sbjct: 256 LYQLMLDCWQKERNSRPKFDEIVNMLD 282
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G++YL
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKYL-- 144
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 204 LQTQ--KFTTKSDVWSFGVLLWEL 225
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 27 NVAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVG 85
N++ + L + G C + +I E+++NG L ++ E +H +T Q L ++
Sbjct: 66 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ------LLEMCKD 119
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +EYL + + LH D+ N L+++ K+SDFGL++ E S G++
Sbjct: 120 VCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFP 175
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
V + PEV + + S KSD++++G++++E+
Sbjct: 176 VRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 205
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L+ ++ G L+ IY H + V Y A I GLE LHR RI++ D+K
Sbjct: 261 LVLTLMNGGDLKFHIY--HMGQAGFPEARAVFY--AAEICCGLEDLHR---ERIVYRDLK 313
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
P NILLD+ +ISD GLA H E ++ G GTVGY+APEV ++ D
Sbjct: 314 PENILLDDHGHIRISDLGLA--VHVPEG-QTIKGRVGTVGYMAPEVVKNE--RYTFSPDW 368
Query: 168 YSYGMMVFEM 177
++ G +++EM
Sbjct: 369 WALGCLLYEM 378
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI E++ GSL ++ +KH +++ L + I +G+EYL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKH----KERIDHIKLLQYTSQICKGMEYL- 133
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H D+ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 192 LTES--KFSVASDVWSFGVVLYEL 213
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E V+ G L F+ EK L + ++ I G+ YLH + +I HFD+K
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEF------LKQILNGVYYLH---SLQIAHFDLK 141
Query: 108 PHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
P NI+L + P KI DFGLA KI G E GT ++APE+ N+ +
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPAFVAPEIV--NYEPLG 195
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 196 LEADMWSIGVITY 208
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 27 NVAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVG 85
N++ + L + G C + +I E+++NG L ++ E +H +T Q L ++
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ------LLEMCKD 113
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +EYL + + LH D+ N L+++ K+SDFGL++ E S G++
Sbjct: 114 VCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSRGSKFP 169
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
V + PEV + + S KSD++++G++++E+
Sbjct: 170 VRWSPPEVLM--YSKFSSKSDIWAFGVLMWEI 199
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 77 EVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESI 136
E+L KI + + L +L N +I+H DIKP NILLD K+ DFG++ +SI
Sbjct: 125 EILGKITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISG--QLVDSI 180
Query: 137 VSMTGARGTVGYIAPEVFCRNFGEVSY--KSDVYSYGMMVFEMTGVKNNANVAVDRSSEI 194
A G Y+APE + Y +SDV+S G+ ++E+ +
Sbjct: 181 AKTRDA-GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELA------------TGRF 227
Query: 195 YFPHW--VYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
+P W V+ +L + N E++E++ I C+ + S RP +++
Sbjct: 228 PYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 12/131 (9%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
L+ ++ G L+ IY H + V Y A I GLE LHR RI++ D+
Sbjct: 260 CLVLTLMNGGDLKFHIY--HMGQAGFPEARAVFY--AAEICCGLEDLHR---ERIVYRDL 312
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
KP NILLD+ +ISD GLA H E ++ G GTVGY+APEV ++ D
Sbjct: 313 KPENILLDDHGHIRISDLGLA--VHVPEG-QTIKGRVGTVGYMAPEVVKNE--RYTFSPD 367
Query: 167 VYSYGMMVFEM 177
++ G +++EM
Sbjct: 368 WWALGCLLYEM 378
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI E++ GSL ++ +KH +++ L + I +G+EYL
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKH----KERIDHIKLLQYTSQICKGMEYL- 134
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H D+ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 135 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 193 LTES--KFSVASDVWSFGVVLYEL 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI E++ GSL ++ +KH +++ L + I +G+EYL
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKH----KERIDHIKLLQYTSQICKGMEYL- 128
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H D+ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 129 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 187 LTES--KFSVASDVWSFGVVLYEL 208
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI E++ GSL ++ +KH +++ L + I +G+EYL
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKH----KERIDHIKLLQYTSQICKGMEYL- 161
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H D+ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 162 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 220 LTES--KFSVASDVWSFGVVLYEL 241
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI E++ GSL ++ +KH +++ L + I +G+EYL
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKH----KERIDHIKLLQYTSQICKGMEYL- 129
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H D+ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 130 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 188 LTES--KFSVASDVWSFGVVLYEL 209
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 41/236 (17%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEK--------------------HPLETNQKLKWE 77
G C + LI E+ GSL F+ E HP E + L
Sbjct: 93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE--RALTMG 150
Query: 78 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV 137
L A I++G++YL +++H D+ NIL+ E KISDFGL++ + +S V
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFP 197
+ R V ++A E + + +SDV+S+G++++E+ + N + P
Sbjct: 208 KRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTLGGNPYPGIP-------P 258
Query: 198 HWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
++ L+ G E + +M + L C + P RP + + LE
Sbjct: 259 ERLFNLLK-------TGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI E++ GSL ++ +KH +++ L + I +G+EYL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKH----KERIDHIKLLQYTSQICKGMEYL- 130
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H D+ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 189 LTES--KFSVASDVWSFGVVLYEL 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI E++ GSL ++ +KH +++ L + I +G+EYL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKH----KERIDHIKLLQYTSQICKGMEYL- 130
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H D+ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 189 LTES--KFSVASDVWSFGVVLYEL 210
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
LI E VS G L F+ +K L + + I G+ YLH +I HFD+
Sbjct: 91 VLILELVSGGELFDFLAQKESLSEEEATSF------IKQILDGVNYLH---TKKIAHFDL 141
Query: 107 KPHNILLDEDFCP----KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
KP NI+L + P K+ DFGLA H E V GT ++APE+ N+ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFKNIFGTPEFVAPEIV--NYEPLG 196
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 197 LEADMWSIGVITY 209
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 41/236 (17%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEK--------------------HPLETNQKLKWE 77
G C + LI E+ GSL F+ E HP E + L
Sbjct: 93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE--RALTMG 150
Query: 78 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV 137
L A I++G++YL +++H D+ NIL+ E KISDFGL++ + +S V
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFP 197
+ R V ++A E + + +SDV+S+G++++E+ + N + P
Sbjct: 208 KRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTLGGNPYPGIP-------P 258
Query: 198 HWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
++ L+ G E + +M + L C + P RP + + LE
Sbjct: 259 ERLFNLLK-------TGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI E++ GSL ++ +KH +++ L + I +G+EYL
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKH----KERIDHIKLLQYTSQICKGMEYL- 136
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H D+ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 137 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 195 LTES--KFSVASDVWSFGVVLYEL 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI E++ GSL ++ +KH +++ L + I +G+EYL
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKH----KERIDHIKLLQYTSQICKGMEYL- 135
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H D+ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 136 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 194 LTES--KFSVASDVWSFGVVLYEL 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI E++ GSL ++ +KH +++ L + I +G+EYL
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKH----KERIDHIKLLQYTSQICKGMEYL- 137
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H D+ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 138 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 196 LTES--KFSVASDVWSFGVVLYEL 217
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI E++ GSL ++ +KH +++ L + I +G+EYL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKH----KERIDHIKLLQYTSQICKGMEYL- 148
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H D+ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 207 LTES--KFSVASDVWSFGVVLYEL 228
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI E++ GSL ++ +KH +++ L + I +G+EYL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKH----KERIDHIKLLQYTSQICKGMEYL- 148
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H D+ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 207 LTES--KFSVASDVWSFGVVLYEL 228
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
LI E VS G L F+ +K L + + I G+ YLH +I HFD+
Sbjct: 91 VLILELVSGGELFDFLAQKESLSEEEATSF------IKQILDGVNYLH---TKKIAHFDL 141
Query: 107 KPHNILLDEDFCP----KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
KP NI+L + P K+ DFGLA H E V GT ++APE+ N+ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFKNIFGTPEFVAPEIV--NYEPLG 196
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 197 LEADMWSIGVITY 209
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ S SD+++ G +++++
Sbjct: 198 AQYVSPELLTEKSAXKS--SDLWALGCIIYQLVA 229
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
LI E VS G L F+ +K L + + I G+ YLH +I HFD+
Sbjct: 91 VLILELVSGGELFDFLAQKESLSEEEATSF------IKQILDGVNYLH---TKKIAHFDL 141
Query: 107 KPHNILLDEDFCP----KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
KP NI+L + P K+ DFGLA H E V GT ++APE+ N+ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFKNIFGTPEFVAPEIV--NYEPLG 196
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 197 LEADMWSIGVITY 209
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
LI E VS G L F+ +K L + + I G+ YLH +I HFD+
Sbjct: 91 VLILELVSGGELFDFLAQKESLSEEEATSF------IKQILDGVNYLH---TKKIAHFDL 141
Query: 107 KPHNILLDEDFCP----KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
KP NI+L + P K+ DFGLA H E V GT ++APE+ N+ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFKNIFGTPEFVAPEIV--NYEPLG 196
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 197 LEADMWSIGVITY 209
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
LI E VS G L F+ +K L + + I G+ YLH +I HFD+
Sbjct: 91 VLILELVSGGELFDFLAQKESLSEEEATSF------IKQILDGVNYLH---TKKIAHFDL 141
Query: 107 KPHNILLDEDFCP----KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
KP NI+L + P K+ DFGLA H E V GT ++APE+ N+ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFKNIFGTPEFVAPEIV--NYEPLG 196
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 197 LEADMWSIGVITY 209
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI E++ GSL ++ +KH +++ L + I +G+EYL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKH----KERIDHIKLLQYTSQICKGMEYL- 130
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H D+ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 189 LTES--KFSVASDVWSFGVVLYEL 210
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 98/207 (47%), Gaps = 25/207 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E + NGSL+ F+ KH + + L + GIA G++YL + +H D+
Sbjct: 123 IVTEXMENGSLDSFL-RKH----DAQFTVIQLVGMLRGIASGMKYL---SDMGAVHRDLA 174
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFGL+++ E+ + G + + + +PE + + + SD
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASD 232
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
V+SYG++++E+ P+W ++ + + +G +
Sbjct: 233 VWSYGIVLWEVMSYGER-------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAA 278
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + ++RP ++V +L+
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C + ++ E V G F+ + +L+ + L ++ A G+EYL C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTE-----GARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG-----TVGYIAPE 152
+H D+ N L+ E KISDFG++ RE + A G V + APE
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMS-----REEADGVXAASGGLRQVPVKWTAPE 285
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFE 176
N+G S +SDV+S+G++++E
Sbjct: 286 AL--NYGRYSSESDVWSFGILLWE 307
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 196 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 110/244 (45%), Gaps = 29/244 (11%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E + NGSL+ F+ KH + + L + GIA G++YL + +H D+
Sbjct: 94 IVTEXMENGSLDSFL-RKH----DAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLA 145
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFGL+++ E+ + G + + + +PE + + + SD
Sbjct: 146 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASD 203
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
V+SYG++++E+ P+W ++ + + +G +
Sbjct: 204 VWSYGIVLWEVMSYGER-------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAA 249
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLEGSLDSLRIPPRPFLLSSGSQPDSSGTLVRQTEP 286
+ + L C Q + ++RP ++V + LD L P + + + S L+ Q+
Sbjct: 250 LYQLMLDCWQKDRNNRPKFEQIVSI----LDKLIRNPGSLKIITSAAARPSNLLLDQSNV 305
Query: 287 SMAT 290
+ T
Sbjct: 306 DITT 309
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G+++L
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKFL-- 208
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 268 LQTQ--KFTTKSDVWSFGVLLWEL 289
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 14/143 (9%)
Query: 39 FCFEGHRRALI-YEFVSNGSLEKFIYEKHPL-ETNQKLKWEVLYKIAVGIARGLEYLHRG 96
FCF+ + + NG L K+I + ET + I LEYLH
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-------YTAEIVSALEYLH-- 154
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
I+H D+KP NILL+ED +I+DFG AK+ GT Y++PE+
Sbjct: 155 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 157 NFGEVSYKSDVYSYGMMVFEMTG 179
SD+++ G +++++
Sbjct: 214 K--SACKSSDLWALGCIIYQLVA 234
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 43/217 (19%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I EF+ NGSL+ F+ + + + L + GIA G++YL + +H +
Sbjct: 85 IITEFMENGSLDSFLRQ-----NDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRALA 136
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG---TVGYIAPEVFCRNFGEVSYK 164
NIL++ + K+SDFGL++ S + T A G + + APE + + +
Sbjct: 137 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI--QYRKFTSA 194
Query: 165 SDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY- 223
SDV+SYG++++E+ P+W D+ Q + N +++Y
Sbjct: 195 SDVWSYGIVMWEVMSYGER-------------PYW---------DMTNQDVINAIEQDYR 232
Query: 224 -------ARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + + RP ++V L+
Sbjct: 233 LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 269
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 98/207 (47%), Gaps = 25/207 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E + NGSL+ F+ KH + + L + GIA G++YL + +H D+
Sbjct: 123 IVTEXMENGSLDSFL-RKH----DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLA 174
Query: 108 PHNILLDEDFCPKISDFGLAKICHGR-ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + K+SDFGL+++ E+ + G + + + +PE + + + SD
Sbjct: 175 ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA--YRKFTSASD 232
Query: 167 VYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARK 226
V+SYG++++E+ P+W ++ + + +G +
Sbjct: 233 VWSYGIVLWEVMSYGER-------------PYWEMSNQDVIKAVD-EGYRLPPPMDCPAA 278
Query: 227 MILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + ++RP ++V +L+
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G+++L
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKFL-- 147
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 207 LQTQ--KFTTKSDVWSFGVLLWEL 228
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G+++L
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKFL-- 154
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 214 LQTQ--KFTTKSDVWSFGVLLWEL 235
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 26/228 (11%)
Query: 38 GFCFEGHRRAL-----IYEFVSNGSLEKFIYEKHPLETNQK-LKWEVLYKIAVGIARGLE 91
G C E + + I F+ G L ++ LET K + + L K V IA G+E
Sbjct: 103 GVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSR-LETGPKHIPLQTLLKFMVDIALGME 161
Query: 92 YLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAP 151
YL N LH D+ N +L +D ++DFGL+K + + A+ V +IA
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLG 211
E + KSDV+++G+ ++E+ V ++ E+Y D
Sbjct: 219 ESLADRV--YTSKSDVWAFGVTMWEIATRGMTPYPGV-QNHEMY-------------DYL 262
Query: 212 LQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSLDSL 259
L G ++ ++ ++ + C + +P DRP + + LE L+SL
Sbjct: 263 LHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G+++L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKFL-- 149
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 209 LQTQ--KFTTKSDVWSFGVLLWEL 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G+++L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKFL-- 150
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 210 LQTQ--KFTTKSDVWSFGVLLWEL 231
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G+++L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKFL-- 149
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ + +E S+ + TGA+ V ++A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 209 LQTQ--KFTTKSDVWSFGVLLWEL 230
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E V+ G L F+ EK L + ++ I G+ YLH + +I HFD+K
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEF------LKQILNGVYYLH---SLQIAHFDLK 141
Query: 108 PHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
P NI+L + P KI DFGLA KI G E GT ++APE+ N+ +
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIV--NYEPLG 195
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 196 LEADMWSIGVITY 208
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 142 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 199 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 230
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L+ E+V GSL ++ +H + Q L A I G+ YLH +H D+
Sbjct: 112 LVMEYVPLGSLRDYL-PRHSIGLAQ------LLLFAQQICEGMAYLH---AQHYIHRDLA 161
Query: 108 PHNILLDEDFCPKISDFGLAK-ICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
N+LLD D KI DFGLAK + G E V + APE C + Y SD
Sbjct: 162 ARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPE--CLKEYKFYYASD 219
Query: 167 VYSYGMMVFEM 177
V+S+G+ ++E+
Sbjct: 220 VWSFGVTLYEL 230
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 15/96 (15%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLAKICHGRESIVSMTGARG 144
L Y H + ++H D+KP NIL +D P KI DFGLA++ E T A G
Sbjct: 136 ALAYFH---SQHVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEH---STNAAG 188
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYG-MMVFEMTG 179
T Y+APEVF R+ V++K D++S G +M F +TG
Sbjct: 189 TALYMAPEVFKRD---VTFKCDIWSAGVVMYFLLTG 221
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 138 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 195 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 226
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C + ++ E V G F+ + +L+ + L ++ A G+EYL C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTE-----GARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG-----TVGYIAPE 152
+H D+ N L+ E KISDFG++ RE + A G V + APE
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMS-----REEADGVYAASGGLRQVPVKWTAPE 285
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFE 176
N+G S +SDV+S+G++++E
Sbjct: 286 AL--NYGRYSSESDVWSFGILLWE 307
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 35/211 (16%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQK----LKWEVLYKIAVGIARGLEYLHRGCNTRILH 103
L+ + +S GS+ I KH + + L + I + GLEYLH+ +H
Sbjct: 85 LVMKLLSGGSVLDII--KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IH 139
Query: 104 FDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG---YIAPEVFCRNFGE 160
D+K NILL ED +I+DFG++ I + VG ++APEV + G
Sbjct: 140 RDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG- 198
Query: 161 VSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED-----LGLQGI 215
+K+D++S+G+ E+ A + +P L L+ D G+Q
Sbjct: 199 YDFKADIWSFGITAIEL---------ATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ-- 247
Query: 216 ENEEDKEYA---RKMILVSLWCIQNNPSDRP 243
+ E K+Y RKMI + C+Q +P RP
Sbjct: 248 DKEMLKKYGKSFRKMISL---CLQKDPEKRP 275
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 35/211 (16%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQK----LKWEVLYKIAVGIARGLEYLHRGCNTRILH 103
L+ + +S GS+ I KH + + L + I + GLEYLH+ +H
Sbjct: 90 LVMKLLSGGSVLDII--KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IH 144
Query: 104 FDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG---YIAPEVFCRNFGE 160
D+K NILL ED +I+DFG++ I + VG ++APEV + G
Sbjct: 145 RDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG- 203
Query: 161 VSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED-----LGLQGI 215
+K+D++S+G+ E+ A + +P L L+ D G+Q
Sbjct: 204 YDFKADIWSFGITAIEL---------ATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ-- 252
Query: 216 ENEEDKEYA---RKMILVSLWCIQNNPSDRP 243
+ E K+Y RKMI + C+Q +P RP
Sbjct: 253 DKEMLKKYGKSFRKMISL---CLQKDPEKRP 280
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 41/236 (17%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEK--------------------HPLETNQKLKWE 77
G C + LI E+ GSL F+ E HP E + L
Sbjct: 93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE--RALTMG 150
Query: 78 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV 137
L A I++G++YL ++H D+ NIL+ E KISDFGL++ + +S V
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFP 197
+ R V ++A E + + +SDV+S+G++++E+ + N + P
Sbjct: 208 KRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTLGGNPYPGIP-------P 258
Query: 198 HWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
++ L+ G E + +M + L C + P RP + + LE
Sbjct: 259 ERLFNLLK-------TGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 119 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 176 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 207
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 118 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 175 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 206
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 196 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 198 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 142 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 199 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 230
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 117 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 174 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 205
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 196 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 116 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 173 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 204
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 196 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 227
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E V+ G L F+ EK L + ++ I G+ YLH + +I HFD+K
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEF------LKQILNGVYYLH---SLQIAHFDLK 141
Query: 108 PHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
P NI+L + P KI DFGLA KI G E GT ++APE+ N+ +
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIV--NYEPLG 195
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 196 LEADMWSIGVITY 208
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 198 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 123 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 180 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 211
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 198 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 144 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 201 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 232
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 138 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 195 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 226
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ GT
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
Y++PE+ SD+++ G +++++
Sbjct: 198 AQYVSPELLTEK--SACKSSDLWALGCIIYQLVA 229
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E V+ G L F+ EK L + ++ I G+ YLH + +I HFD+K
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEF------LKQILNGVYYLH---SLQIAHFDLK 141
Query: 108 PHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
P NI+L + P KI DFGLA KI G E GT ++APE+ N+ +
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIV--NYEPLG 195
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 196 LEADMWSIGVITY 208
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E V+ G L F+ EK L + ++ I G+ YLH + +I HFD+K
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEF------LKQILNGVYYLH---SLQIAHFDLK 141
Query: 108 PHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
P NI+L + P KI DFGLA KI G E GT ++APE+ N+ +
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIV--NYEPLG 195
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 196 LEADMWSIGVITY 208
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 27/202 (13%)
Query: 51 EFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 110
E+ N +L I+ ++ L + W + +I L Y+H + I+H ++KP N
Sbjct: 95 EYCENRTLYDLIHSEN-LNQQRDEYWRLFRQIL----EALSYIH---SQGIIHRNLKPXN 146
Query: 111 ILLDEDFCPKISDFGLAKICHGRESIV------------SMTGARGTVGYIAPEVFCRNF 158
I +DE KI DFGLAK H I+ ++T A GT Y+A EV
Sbjct: 147 IFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVL-DGT 205
Query: 159 GEVSYKSDVYSYGMMVFEM-----TGVKNNANVAVDRSSEIYF-PHWVYKRLELEEDLGL 212
G + K D YS G++ FE TG + + RS I F P + + ++E+ +
Sbjct: 206 GHYNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKLRSVSIEFPPDFDDNKXKVEKKIIR 265
Query: 213 QGIENEEDKEYARKMILVSLWC 234
I+++ +K + +L S W
Sbjct: 266 LLIDHDPNKRPGARTLLNSGWL 287
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLE---TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHF 104
L+ E+ GSL ++ PL + W + ++G+ YLH ++H
Sbjct: 77 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKALIHR 130
Query: 105 DIKPHNILL-DEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVS 162
D+KP N+LL KI DFG A C + MT +G+ ++APEVF N+ E
Sbjct: 131 DLKPPNLLLVAGGTVLKICDFGTA--C---DIQTHMTNNKGSAAWMAPEVFEGSNYSE-- 183
Query: 163 YKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKE 222
K DV+S+G++++E+ + + + I + R L ++L + IE+ +
Sbjct: 184 -KCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLP-KPIESLMTR- 240
Query: 223 YARKMILVSLWCIQNNPSDRPAMNRVVEML 252
C +PS RP+M +V+++
Sbjct: 241 -----------CWSKDPSQRPSMEEIVKIM 259
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 24/135 (17%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ EF+ G+L + T+ ++ E + + + + R L YLH N ++H DIK
Sbjct: 119 VVMEFLEGGALTDIV-------THTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIK 168
Query: 108 PHNILLDEDFCPKISDFG----LAKICHGRESIVSMTGARGTVGYIAPEVFCR-NFGEVS 162
+ILL D K+SDFG ++K R+ +V GT ++APEV R +G
Sbjct: 169 SDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV------GTPYWMAPEVISRLPYGT-- 220
Query: 163 YKSDVYSYGMMVFEM 177
+ D++S G+MV EM
Sbjct: 221 -EVDIWSLGIMVIEM 234
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQK--LKWEVLYKIAVGIARGLEYLHRGCNTRILHFD 105
+IYE++ N S+ KF L+ N + +V+ I + Y+H N I H D
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRD 177
Query: 106 IKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
+KP NIL+D++ K+SDFG ++ ++ + G+RGT ++ PE F K
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESEYMVDKK----IKGSRGTYEFMPPEFFSNESSYNGAKV 233
Query: 166 DVYSYGMMVFEM 177
D++S G+ ++ M
Sbjct: 234 DIWSLGICLYVM 245
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E V+ G L F+ EK L + ++ I G+ YLH + +I HFD+K
Sbjct: 90 LILELVAGGELFDFLAEKESLTEEEATEF------LKQILNGVYYLH---SLQIAHFDLK 140
Query: 108 PHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
P NI+L + P KI DFGLA KI G E GT ++APE+ N+ +
Sbjct: 141 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIV--NYEPLG 194
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 195 LEADMWSIGVITY 207
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E V+ G L F+ EK L + ++ I G+ YLH + +I HFD+K
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEF------LKQILNGVYYLH---SLQIAHFDLK 141
Query: 108 PHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
P NI+L + P KI DFGLA KI G E GT ++APE+ N+ +
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIV--NYEPLG 195
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 196 LEADMWSIGVITY 208
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E V+ G L F+ EK L + ++ I G+ YLH + +I HFD+K
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEF------LKQILNGVYYLH---SLQIAHFDLK 141
Query: 108 PHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
P NI+L + P KI DFGLA KI G E GT ++APE+ N+ +
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIV--NYEPLG 195
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 196 LEADMWSIGVITY 208
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E V+ G L F+ EK L + ++ I G+ YLH + +I HFD+K
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEF------LKQILNGVYYLH---SLQIAHFDLK 141
Query: 108 PHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
P NI+L + P KI DFGLA KI G E GT ++APE+ N+ +
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIV--NYEPLG 195
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 196 LEADMWSIGVITY 208
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E V+ G L F+ EK L + ++ I G+ YLH + +I HFD+K
Sbjct: 90 LILELVAGGELFDFLAEKESLTEEEATEF------LKQILNGVYYLH---SLQIAHFDLK 140
Query: 108 PHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
P NI+L + P KI DFGLA KI G E GT ++APE+ N+ +
Sbjct: 141 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIV--NYEPLG 194
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 195 LEADMWSIGVITY 207
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 33/228 (14%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLK----WEVLYKIAVGIARGLEYL 93
G +G ++ E +++G L+ ++ P N + + + ++A IA G+ YL
Sbjct: 87 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 146
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ DF KI DFG+ + + E+ G +G V ++AP
Sbjct: 147 N---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETAYYRKGGKGLLPVRWMAP 201
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLG 211
E G + SD++S+G++++E+T + Y+ L E+ L
Sbjct: 202 ESL--KDGVFTTSSDMWSFGVVLWEITSLAEQP----------------YQGLSNEQVLK 243
Query: 212 L---QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSL 256
G ++ D R L+ + C Q NP RP +V +L+ L
Sbjct: 244 FVMDGGYLDQPDNCPERVTDLMRM-CWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 20/133 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E V+ G L F+ EK L + E L +I G+ YLH + +I HFD+K
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEAT--EFLKQILNGVY----YLH---SLQIAHFDLK 141
Query: 108 PHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
P NI+L + P KI DFGLA KI G E GT ++APE+ N+ +
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIV--NYEPLG 195
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 196 LEADMWSIGVITY 208
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E V+ G L F+ EK L + ++ I G+ YLH + +I HFD+K
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEF------LKQILNGVYYLH---SLQIAHFDLK 141
Query: 108 PHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
P NI+L + P KI DFGLA KI G E GT ++APE+ N+ +
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIV--NYEPLG 195
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 196 LEADMWSIGVITY 208
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E V+ G L F+ EK L + ++ I G+ YLH + +I HFD+K
Sbjct: 91 LILELVAGGELFDFLAEKESLTEEEATEF------LKQILNGVYYLH---SLQIAHFDLK 141
Query: 108 PHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
P NI+L + P KI DFGLA KI G E GT ++APE+ N+ +
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIV--NYEPLG 195
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 196 LEADMWSIGVITY 208
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ ++ +G L +FI + N +K L + +ARG+EYL + +H D+
Sbjct: 100 VLLPYMCHGDLLQFIRSP---QRNPTVK--DLISFGLQVARGMEYL---AEQKFVHRDLA 151
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
N +LDE F K++DFGLA+ RE S+ AR V + A E + KS
Sbjct: 152 ARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL--QTYRFTTKS 209
Query: 166 DVYSYGMMVFEM 177
DV+S+G++++E+
Sbjct: 210 DVWSFGVLLWEL 221
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 26/224 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEK-HPLET-------NQKLKWEVLYKIAVGIARG 89
G C G +I E+ G L F+ K LET N L L + +A+G
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQG 176
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYI 149
+ +L + +H D+ N+LL KI DFGLA+ + + AR V ++
Sbjct: 177 MAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 233
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED 209
APE V +SDV+SYG++++E+ + N + +S+ Y +L +D
Sbjct: 234 APESIFDCVYTV--QSDVWSYGILLWEIFSLGLNPYPGILVNSKFY---------KLVKD 282
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
G + + + + + C P+ RP ++ L+
Sbjct: 283 ----GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 13/95 (13%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR-- 143
+A L++LH + I++ D+KP NILLDE+ K++DFGL+K ESI A
Sbjct: 135 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK-----ESIDHEKKAYSF 186
Query: 144 -GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GTV Y+APEV R S +D +S+G+++FEM
Sbjct: 187 CGTVEYMAPEVVNRRGHTQS--ADWWSFGVLMFEM 219
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 13/95 (13%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR-- 143
+A L++LH + I++ D+KP NILLDE+ K++DFGL+K ESI A
Sbjct: 136 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK-----ESIDHEKKAYSF 187
Query: 144 -GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GTV Y+APEV R S +D +S+G+++FEM
Sbjct: 188 CGTVEYMAPEVVNRRGHTQS--ADWWSFGVLMFEM 220
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQK----LKWEVLYKIAVGIARGLEYL 93
G C G +I E+ G L F+ K + +++ L+ L + +A+G+ +L
Sbjct: 109 GACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL 168
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEV 153
+ +H D+ N+LL KI DFGLA+ + + AR V ++APE
Sbjct: 169 ---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPES 225
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQ 213
V +SDV+SYG++++E+ + N + +S+ Y +L +D
Sbjct: 226 IFDCVYTV--QSDVWSYGILLWEIFSLGLNPYPGILVNSKFY---------KLVKD---- 270
Query: 214 GIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
G + + + + + C P+ RP ++ L+
Sbjct: 271 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 310
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLE---TNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHF 104
L+ E+ GSL ++ PL + W + ++G+ YLH ++H
Sbjct: 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKALIHR 129
Query: 105 DIKPHNILL-DEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CRNFGEVS 162
D+KP N+LL KI DFG A C + MT +G+ ++APEVF N+ E
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFGTA--C---DIQTHMTNNKGSAAWMAPEVFEGSNYSE-- 182
Query: 163 YKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKE 222
K DV+S+G++++E+ + + + I + R L ++L + IE+ +
Sbjct: 183 -KCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLP-KPIESLMTR- 239
Query: 223 YARKMILVSLWCIQNNPSDRPAMNRVVEML 252
C +PS RP+M +V+++
Sbjct: 240 -----------CWSKDPSQRPSMEEIVKIM 258
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I GLE+LH+ I++ D+KP N+LLD+D +ISD GLA + G GT
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGT 352
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKN 182
G++APE+ E + D ++ G+ ++EM +
Sbjct: 353 PGFMAPELLLGE--EYDFSVDYFALGVTLYEMIAARG 387
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I GLE+LH+ I++ D+KP N+LLD+D +ISD GLA + G GT
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGT 352
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKN 182
G++APE+ E + D ++ G+ ++EM +
Sbjct: 353 PGFMAPELLLGE--EYDFSVDYFALGVTLYEMIAARG 387
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 13/95 (13%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR-- 143
+A L++LH + I++ D+KP NILLDE+ K++DFGL+K ESI A
Sbjct: 135 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK-----ESIDHEKKAYSF 186
Query: 144 -GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GTV Y+APEV R S +D +S+G+++FEM
Sbjct: 187 CGTVEYMAPEVVNRRGHTQS--ADWWSFGVLMFEM 219
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I GLE+LH+ I++ D+KP N+LLD+D +ISD GLA + G GT
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGT 352
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKN 182
G++APE+ E + D ++ G+ ++EM +
Sbjct: 353 PGFMAPELLLGE--EYDFSVDYFALGVTLYEMIAARG 387
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 28/226 (12%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP--LETN--------QKLKWEVLYKIAVGIA 87
G C G +I E+ G L F+ K P LE + ++L L + +A
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVA 176
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
+G+ +L + +H D+ N+LL KI DFGLA+ + + AR V
Sbjct: 177 QGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 233
Query: 148 YIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELE 207
++APE V +SDV+SYG++++E+ + N + +S+ Y +L
Sbjct: 234 WMAPESIFDCVYTV--QSDVWSYGILLWEIFSLGLNPYPGILVNSKFY---------KLV 282
Query: 208 EDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+D G + + + + + C P+ RP ++ L+
Sbjct: 283 KD----GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 324
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L+ E++ +G L F+ ++H +L L + I +G+EYL + R +H D+
Sbjct: 87 LVMEYLPSGCLRDFL-QRH----RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLA 138
Query: 108 PHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + KI+DFGLAK+ ++ V + + + APE N S +SD
Sbjct: 139 ARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNI--FSRQSD 196
Query: 167 VYSYGMMVFEM 177
V+S+G++++E+
Sbjct: 197 VWSFGVVLYEL 207
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 78/135 (57%), Gaps = 14/135 (10%)
Query: 51 EFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 110
EF G+LE++I ++ + ++ L E+ +I +G++Y+H + +++H D+KP N
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT----KGVDYIH---SKKLIHRDLKPSN 166
Query: 111 ILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCRNFGEVSYKSDVYS 169
I L + KI DFGL ++ T ++GT+ Y++PE + +++G+ + D+Y+
Sbjct: 167 IFLVDTKQVKIGDFGLVT---SLKNDGKRTRSKGTLRYMSPEQISSQDYGK---EVDLYA 220
Query: 170 YGMMVFEMTGVKNNA 184
G+++ E+ V + A
Sbjct: 221 LGLILAELLHVCDTA 235
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I GLE+LH+ I++ D+KP N+LLD+D +ISD GLA + G GT
Sbjct: 298 IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGT 352
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKN 182
G++APE+ E + D ++ G+ ++EM +
Sbjct: 353 PGFMAPELLLGE--EYDFSVDYFALGVTLYEMIAARG 387
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI E++ GSL ++ + H +++ L + I +G+EYL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHA----ERIDHIKLLQYTSQICKGMEYL- 133
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H D+ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 192 LTES--KFSVASDVWSFGVVLYEL 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 37 KGFCFEGHRRAL--IYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C + ++L + E+V GSL ++ +H + Q L A I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQ------LLLFAQQICEGMAYLH 134
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICHGRESIVSMTGARGTVGYIAPEV 153
+ +H ++ N+LLD D KI DFGLAK + G E V + APE
Sbjct: 135 ---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE- 190
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
C + Y SDV+S+G+ ++E+
Sbjct: 191 -CLKEYKFYYASDVWSFGVTLYEL 213
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 15/144 (10%)
Query: 38 GFCFEGHRRALI-YEFVSNGSLEKFIY-EKHPLETNQKLKWEVLYKIAVGIARGLEYLHR 95
G C L+ ++ +G L FI E H N +K L + +A+G+++L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVK--DLIGFGLQVAKGMKFL-- 150
Query: 96 GCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--SIVSMTGARGTVGYIAPEV 153
+ + +H D+ N +LDE F K++DFGLA+ +E S+ + TGA+ V ++A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + KSDV+S+G++++E+
Sbjct: 210 LQTQ--KFTTKSDVWSFGVLLWEL 231
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 85 GICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 135
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 136 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 195 RI--YTHQSDVWSYGVTVWEL 213
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQK----LKWEVLYKIAVGIARGLEYL 93
G C G +I E+ G L F+ K + +++ L+ L + +A+G+ +L
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL 176
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEV 153
+ +H D+ N+LL KI DFGLA+ + + AR V ++APE
Sbjct: 177 ---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPES 233
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQ 213
V +SDV+SYG++++E+ + N + +S+ Y +L +D
Sbjct: 234 IFDCVYTV--QSDVWSYGILLWEIFSLGLNPYPGILVNSKFY---------KLVKD---- 278
Query: 214 GIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
G + + + + + C P+ RP ++ L+
Sbjct: 279 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 318
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 33/228 (14%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLK----WEVLYKIAVGIARGLEYL 93
G +G ++ E +++G L+ ++ P N + + + ++A IA G+ YL
Sbjct: 87 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 146
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ DF KI DFG+ + E+ G +G V ++AP
Sbjct: 147 NA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--XETDXXRKGGKGLLPVRWMAP 201
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLG 211
E G + SD++S+G++++E+T + Y+ L E+ L
Sbjct: 202 ESL--KDGVFTTSSDMWSFGVVLWEITSLAEQP----------------YQGLSNEQVLK 243
Query: 212 L---QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSL 256
G ++ D R L+ + C Q NP+ RP +V +L+ L
Sbjct: 244 FVMDGGYLDQPDNCPERVTDLMRM-CWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 118 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 168
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 169 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 227
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 228 RI--YTHQSDVWSYGVTVWEL 246
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 16/133 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
++ E + GSL++ + E +++ E+L K+++ + RGL YL +I+H D+
Sbjct: 90 SICMEHMDGGSLDQVLKEA------KRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDV 141
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA-RGTVGYIAPEVFCRNFGEVSYKS 165
KP NIL++ K+ DFG++ + I SM + GT Y+APE S +S
Sbjct: 142 KPSNILVNSRGEIKLCDFGVSG-----QLIDSMANSFVGTRSYMAPERL--QGTHYSVQS 194
Query: 166 DVYSYGMMVFEMT 178
D++S G+ + E+
Sbjct: 195 DIWSMGLSLVELA 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 114
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR 143
G+ YLH I H DIKP N+LLDE KISDFGLA + +
Sbjct: 115 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 144 GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 168 GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 200
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 114
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR 143
G+ YLH I H DIKP N+LLDE KISDFGLA + +
Sbjct: 115 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 144 GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 168 GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 200
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 85 GICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 135
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 136 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 195 RI--YTHQSDVWSYGVTVWEL 213
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 33/228 (14%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLK----WEVLYKIAVGIARGLEYL 93
G +G ++ E +++G L+ ++ P N + + + ++A IA G+ YL
Sbjct: 87 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 146
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ DF KI DFG+ + + E+ G +G V ++AP
Sbjct: 147 N---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWMAP 201
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLG 211
E G + SD++S+G++++E+T + Y+ L E+ L
Sbjct: 202 ESL--KDGVFTTSSDMWSFGVVLWEITSLAEQP----------------YQGLSNEQVLK 243
Query: 212 L---QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSL 256
G ++ D R L+ + C Q NP RP +V +L+ L
Sbjct: 244 FVMDGGYLDQPDNCPERVTDLMRM-CWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 87 GICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 137
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 197 RI--YTHQSDVWSYGVTVWEL 215
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 33/228 (14%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLK----WEVLYKIAVGIARGLEYL 93
G +G ++ E +++G L+ ++ P N + + + ++A IA G+ YL
Sbjct: 87 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 146
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ DF KI DFG+ + E+ G +G V ++AP
Sbjct: 147 N---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX--ETDXXRKGGKGLLPVRWMAP 201
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLG 211
E G + SD++S+G++++E+T + Y+ L E+ L
Sbjct: 202 ESL--KDGVFTTSSDMWSFGVVLWEITSLAEQP----------------YQGLSNEQVLK 243
Query: 212 L---QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSL 256
G ++ D R L+ + C Q NP RP +V +L+ L
Sbjct: 244 FVMDGGYLDQPDNCPERVTDLMRM-CWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 91 GICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 141
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 201 RI--YTHQSDVWSYGVTVWEL 219
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 84 GICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 134
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 194 RI--YTHQSDVWSYGVTVWEL 212
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 88 GICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 138
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 139 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 198 RI--YTHQSDVWSYGVTVWEL 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 86 GICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 136
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 196 RI--YTHQSDVWSYGVTVWEL 214
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 37 KGFCFEGHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C+ RR LI E++ GSL ++ +KH +++ L + I +G+EYL
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKH----KERIDHIKLLQYTSQICKGMEYL- 131
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-HGRESIVSMTGARGTVGYIAPEV 153
R +H ++ NIL++ + KI DFGL K+ +E + + APE
Sbjct: 132 --GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
+ + S SDV+S+G++++E+
Sbjct: 190 LTES--KFSVASDVWSFGVVLYEL 211
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 115
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR 143
G+ YLH I H DIKP N+LLDE KISDFGLA + +
Sbjct: 116 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 168
Query: 144 GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 169 GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 201
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E G L + I KH + + + ++K V + LE++H + R++H DIK
Sbjct: 109 IVLELADAGDLSRMI--KHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIK 163
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG---YIAPEVFCRNFGEVSYK 164
P N+ + K+ D GL GR T A VG Y++PE N ++K
Sbjct: 164 PANVFITATGVVKLGDLGL-----GRFFSSKTTAAHSLVGTPYYMSPERIHEN--GYNFK 216
Query: 165 SDVYSYGMMVFEMTGVKN 182
SD++S G +++EM +++
Sbjct: 217 SDIWSLGCLLYEMAALQS 234
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 17/95 (17%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR---- 143
+G++YLH N R++H D+K N+ L++D KI DFGLA + + G R
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKDL 202
Query: 144 -GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT YIAPEV C+ G S++ D++S G +++ +
Sbjct: 203 CGTPNYIAPEVLCKK-GH-SFEVDIWSLGCILYTL 235
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 55 NGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 114
+ SL+KF K ++ Q + ++L KIAV I + LE+LH + ++H D+KP N+L++
Sbjct: 89 DTSLDKFY--KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLIN 144
Query: 115 EDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSY--KSDVYSYGM 172
K+ DFG++ V+ G Y+APE + Y KSD++S G+
Sbjct: 145 ALGQVKMCDFGISGYLVDD---VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGI 201
Query: 173 MVFEMT 178
+ E+
Sbjct: 202 TMIELA 207
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 33/228 (14%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLK----WEVLYKIAVGIARGLEYL 93
G +G ++ E +++G L+ ++ P N + + + ++A IA G+ YL
Sbjct: 84 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 143
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ DF KI DFG+ + E+ G +G V ++AP
Sbjct: 144 N---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--XETDXXRKGGKGLLPVRWMAP 198
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLG 211
E G + SD++S+G++++E+T + Y+ L E+ L
Sbjct: 199 ESL--KDGVFTTSSDMWSFGVVLWEITSLAEQP----------------YQGLSNEQVLK 240
Query: 212 L---QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSL 256
G ++ D R L+ + C Q NP RP +V +L+ L
Sbjct: 241 FVMDGGYLDQPDNCPERVTDLMRM-CWQFNPKMRPTFLEIVNLLKDDL 287
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 84 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 134
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 194 RI--YTHQSDVWSYGVTVWEL 212
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 114
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR 143
G+ YLH I H DIKP N+LLDE KISDFGLA + +
Sbjct: 115 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 144 GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 168 GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 200
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 86 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 136
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 196 RI--YTHQSDVWSYGVTVWEL 214
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E V+ G L F+ EK L + ++ I G+ YLH + +I HFD+K
Sbjct: 91 LIGELVAGGELFDFLAEKESLTEEEATEF------LKQILNGVYYLH---SLQIAHFDLK 141
Query: 108 PHNILLDEDFCP----KISDFGLA-KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
P NI+L + P KI DFGLA KI G E GT ++APE+ N+ +
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIV--NYEPLG 195
Query: 163 YKSDVYSYGMMVF 175
++D++S G++ +
Sbjct: 196 LEADMWSIGVITY 208
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 17/95 (17%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR---- 143
+G++YLH N R++H D+K N+ L++D KI DFGLA + + G R
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKXL 202
Query: 144 -GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT YIAPEV C+ G S++ D++S G +++ +
Sbjct: 203 CGTPNYIAPEVLCKK-GH-SFEVDIWSLGCILYTL 235
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 17/95 (17%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR---- 143
+G++YLH N R++H D+K N+ L++D KI DFGLA + + G R
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKTL 202
Query: 144 -GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT YIAPEV C+ G S++ D++S G +++ +
Sbjct: 203 CGTPNYIAPEVLCKK-GH-SFEVDIWSLGCILYTL 235
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 84 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 134
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 194 RI--YTHQSDVWSYGVTVWEL 212
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 87 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 137
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 197 RI--YTHQSDVWSYGVTVWEL 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 84 GICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 134
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 194 RI--YTHQSDVWSYGVTVWEL 212
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 94 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 144
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 145 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 203
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 204 RI--YTHQSDVWSYGVTVWEL 222
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 33/228 (14%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLK----WEVLYKIAVGIARGLEYL 93
G +G ++ E +++G L+ ++ P N + + + ++A IA G+ YL
Sbjct: 86 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 145
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ DF KI DFG+ + + E+ G +G V ++AP
Sbjct: 146 N---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWMAP 200
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLG 211
E G + SD++S+G++++E+T + Y+ L E+ L
Sbjct: 201 ESL--KDGVFTTSSDMWSFGVVLWEITSLAEQP----------------YQGLSNEQVLK 242
Query: 212 L---QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSL 256
G ++ D R L+ + C Q NP RP +V +L+ L
Sbjct: 243 FVMDGGYLDQPDNCPERVTDLMRM-CWQFNPKMRPTFLEIVNLLKDDL 289
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 91 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 141
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 201 RI--YTHQSDVWSYGVTVWEL 219
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 87 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 137
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 197 RI--YTHQSDVWSYGVTVWEL 215
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 87 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 137
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 197 RI--YTHQSDVWSYGVTVWEL 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 84 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 134
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 194 RI--YTHQSDVWSYGVTVWEL 212
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 179
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 180 -RHTADEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 223
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 17/95 (17%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR---- 143
+G++YLH N R++H D+K N+ L++D KI DFGLA + + G R
Sbjct: 137 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKDL 186
Query: 144 -GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT YIAPEV C+ G S++ D++S G +++ +
Sbjct: 187 CGTPNYIAPEVLCKK-GH-SFEVDIWSLGCILYTL 219
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 114
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR 143
G+ YLH I H DIKP N+LLDE KISDFGLA + +
Sbjct: 115 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 144 GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 168 GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 200
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 91 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 141
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 201 RI--YTHQSDVWSYGVTVWEL 219
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 179
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 180 -RHTADEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 223
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 90 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 140
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 141 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 199
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 200 RI--YTHQSDVWSYGVTVWEL 218
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 32/206 (15%)
Query: 48 LIYEFVSNGSLEKFIYEKHPL--ETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFD 105
++ ++ G L K I + + + +Q L W V I L+++H + +ILH D
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDW------FVQICLALKHVH---DRKILHRD 150
Query: 106 IKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA-RGTVGYIAPEVFCRNFGEVSYK 164
IK NI L +D ++ DFG+A++ + S V + A GT Y++PE+ C N + K
Sbjct: 151 IKSQNIFLTKDGTVQLGDFGIARVLN---STVELARACIGTPYYLSPEI-CEN-KPYNNK 205
Query: 165 SDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYA 224
SD+++ G +++E+ +K+ ++ + + + L L+ + ++
Sbjct: 206 SDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQ------ 259
Query: 225 RKMILVSLWCIQNNPSDRPAMNRVVE 250
+ NP DRP++N ++E
Sbjct: 260 ---------LFKRNPRDRPSVNSILE 276
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 26/162 (16%)
Query: 48 LIYEFVSNGSL--------EKFIYEKHPLETNQKLK---------WEVLYKIAVGIARGL 90
LI+E+ G L EKF ++ E ++L+ +E L A +A+G+
Sbjct: 126 LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGM 185
Query: 91 EYLH-RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYI 149
E+L + C +H D+ N+L+ KI DFGLA+ + V AR V ++
Sbjct: 186 EFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWM 241
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEM--TGVKNNANVAVD 189
APE G + KSDV+SYG++++E+ GV + VD
Sbjct: 242 APESLFE--GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 281
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E+V +L ++ + P+ + ++ IA + L+ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---------IADACQALNFSHQNGIIHRDVK 143
Query: 108 PHNILLDEDFCPKISDFGLAK-ICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
P NIL+ K+ DFG+A+ I S+ GT Y++PE + V +SD
Sbjct: 144 PANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 167 VYSYGMMVFE-MTG 179
VYS G +++E +TG
Sbjct: 202 VYSLGCVLYEVLTG 215
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 78 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 128
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 129 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 187
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 188 RI--YTHQSDVWSYGVTVWEL 206
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 179
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 180 -RHTADEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 223
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 66 HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFG 125
H E +L + L + IA+G+ YL + R++H D+ N+L+ KI+DFG
Sbjct: 108 HVRENRGRLGSQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFG 164
Query: 126 LAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
LA++ E+ G + + ++A E R +++SDV+SYG+ V+E+
Sbjct: 165 LARLLDIDETEYHADGGKVPIKWMALESILRR--RFTHQSDVWSYGVTVWEL 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 109 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 159
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 160 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 218
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 219 RI--YTHQSDVWSYGVTVWEL 237
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA---- 177
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 178 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 221
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 37 KGFCFEGHRRAL--IYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C + ++L + E+V GSL ++ +H + Q L A I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQ------LLLFAQQICEGMAYLH 134
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICHGRESIVSMTGARGTVGYIAPEV 153
+H ++ N+LLD D KI DFGLAK + G E V + APE
Sbjct: 135 ---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE- 190
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
C + Y SDV+S+G+ ++E+
Sbjct: 191 -CLKEYKFYYASDVWSFGVTLYEL 213
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA---- 183
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 184 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA---- 177
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 178 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 221
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L+ E++ +G L F+ ++H +L L + I +G+EYL + R +H D+
Sbjct: 90 LVMEYLPSGCLRDFL-QRH----RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLA 141
Query: 108 PHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + KI+DFGLAK+ ++ V + + + APE N S +SD
Sbjct: 142 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI--FSRQSD 199
Query: 167 VYSYGMMVFEM 177
V+S+G++++E+
Sbjct: 200 VWSFGVVLYEL 210
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGXVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILL---DEDFCPKISDFGLAKICHGRESIVSMTGA 142
+ G+ YLH+ I+H D+KP N+LL ++D KI DFGL+ + ++ M
Sbjct: 145 VLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---KMKER 198
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
GT YIAPEV + + E K DV+S G+++F
Sbjct: 199 LGTAYYIAPEVLRKKYDE---KCDVWSIGVILF 228
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L+ E++ +G L F+ ++H +L L + I +G+EYL + R +H D+
Sbjct: 91 LVMEYLPSGCLRDFL-QRH----RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLA 142
Query: 108 PHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + KI+DFGLAK+ ++ V + + + APE N S +SD
Sbjct: 143 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI--FSRQSD 200
Query: 167 VYSYGMMVFEM 177
V+S+G++++E+
Sbjct: 201 VWSFGVVLYEL 211
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 31/224 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRG 96
G + R ++ E ++ G L+ F+ E P + L L +A IA G +YL
Sbjct: 92 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE-- 149
Query: 97 CNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRESIVSMTG-ARGTVGYI 149
+H DI N LL CP KI DFG+A+ + R S G A V ++
Sbjct: 150 -ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWM 204
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED 209
PE F G + K+D +S+G++++E+ + Y P+ E+ E
Sbjct: 205 PPEAFME--GIFTSKTDTWSFGVLLWEIFSLG-------------YMPYPSKSNQEVLEF 249
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ G + K + + C Q+ P DRP ++E +E
Sbjct: 250 V-TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C + L+ E G L KF+ K E E+L+++++G ++YL
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMG----MKYLE--- 127
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA-RGTVGYIAPEVFCR 156
+H D+ N+LL KISDFGL+K +S + A + + + APE C
Sbjct: 128 EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE--CI 185
Query: 157 NFGEVSYKSDVYSYGMMVFE 176
NF + S +SDV+SYG+ ++E
Sbjct: 186 NFRKFSSRSDVWSYGVTMWE 205
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L+ E++ +G L F+ ++H +L L + I +G+EYL + R +H D+
Sbjct: 103 LVMEYLPSGCLRDFL-QRH----RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLA 154
Query: 108 PHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
NIL++ + KI+DFGLAK+ ++ V + + + APE N S +SD
Sbjct: 155 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI--FSRQSD 212
Query: 167 VYSYGMMVFEM 177
V+S+G++++E+
Sbjct: 213 VWSFGVVLYEL 223
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 31/224 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRG 96
G + R ++ E ++ G L+ F+ E P + L L +A IA G +YL
Sbjct: 101 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE-- 158
Query: 97 CNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRESIVSMTG-ARGTVGYI 149
+H DI N LL CP KI DFG+A+ + R S G A V ++
Sbjct: 159 -ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWM 213
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED 209
PE F G + K+D +S+G++++E+ + Y P+ E+ E
Sbjct: 214 PPEAFME--GIFTSKTDTWSFGVLLWEIFSLG-------------YMPYPSKSNQEVLEF 258
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ G + K + + C Q+ P DRP ++E +E
Sbjct: 259 V-TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 31/224 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRG 96
G + R ++ E ++ G L+ F+ E P + L L +A IA G +YL
Sbjct: 101 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE-- 158
Query: 97 CNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRESIVSMTG-ARGTVGYI 149
+H DI N LL CP KI DFG+A+ + R S G A V ++
Sbjct: 159 -ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWM 213
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED 209
PE F G + K+D +S+G++++E+ + Y P+ E+ E
Sbjct: 214 PPEAFME--GIFTSKTDTWSFGVLLWEIFSLG-------------YMPYPSKSNQEVLEF 258
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ G + K + + C Q+ P DRP ++E +E
Sbjct: 259 V-TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 43/217 (19%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ EF+ NG+L+ F+ L Q + L + GIA G+ YL +H D+
Sbjct: 92 ILTEFMENGALDSFLR----LNDGQFTVIQ-LVGMLRGIASGMRYL---AEMSYVHRDLA 143
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMT---GARGTVGYIAPEVFCRNFGEVSYK 164
NIL++ + K+SDFGL++ S + T G + + + APE F + +
Sbjct: 144 ARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA--FRKFTSA 201
Query: 165 SDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY- 223
SD +SYG++++E+ P+W D+ Q + N +++Y
Sbjct: 202 SDAWSYGIVMWEVMSFGER-------------PYW---------DMSNQDVINAIEQDYR 239
Query: 224 -------ARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + + RP +VV L+
Sbjct: 240 LPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 276
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 31/224 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRG 96
G + R ++ E ++ G L+ F+ E P + L L +A IA G +YL
Sbjct: 115 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE- 173
Query: 97 CNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRESIVSMTG-ARGTVGYI 149
+H DI N LL CP KI DFG+A+ + R S G A V ++
Sbjct: 174 --NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWM 227
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED 209
PE F G + K+D +S+G++++E+ + Y P+ E+ E
Sbjct: 228 PPEAFME--GIFTSKTDTWSFGVLLWEIFSLG-------------YMPYPSKSNQEVLEF 272
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ G + K + + C Q+ P DRP ++E +E
Sbjct: 273 V-TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E+V +L ++ + P+ + ++ IA + L+ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---------IADACQALNFSHQNGIIHRDVK 143
Query: 108 PHNILLDEDFCPKISDFGLAK-ICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
P NI++ K+ DFG+A+ I S+ GT Y++PE + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 167 VYSYGMMVFE-MTG 179
VYS G +++E +TG
Sbjct: 202 VYSLGCVLYEVLTG 215
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 31/224 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRG 96
G + R ++ E ++ G L+ F+ E P + L L +A IA G +YL
Sbjct: 115 GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE- 173
Query: 97 CNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRESIVSMTG-ARGTVGYI 149
+H DI N LL CP KI DFG+A+ + R S G A V ++
Sbjct: 174 --NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWM 227
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED 209
PE F G + K+D +S+G++++E+ + Y P+ E+ E
Sbjct: 228 PPEAFME--GIFTSKTDTWSFGVLLWEIFSLG-------------YMPYPSKSNQEVLEF 272
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ G + K + + C Q+ P DRP ++E +E
Sbjct: 273 V-TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E+V +L ++ + P+ + ++ IA + L+ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---------IADACQALNFSHQNGIIHRDVK 143
Query: 108 PHNILLDEDFCPKISDFGLAK-ICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
P NI++ K+ DFG+A+ I S+ GT Y++PE + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 167 VYSYGMMVFE-MTG 179
VYS G +++E +TG
Sbjct: 202 VYSLGCVLYEVLTG 215
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 31/224 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRG 96
G + R ++ E ++ G L+ F+ E P + L L +A IA G +YL
Sbjct: 107 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE-- 164
Query: 97 CNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRESIVSMTG-ARGTVGYI 149
+H DI N LL CP KI DFG+A+ + R S G A V ++
Sbjct: 165 -ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWM 219
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED 209
PE F G + K+D +S+G++++E+ + Y P+ E+ E
Sbjct: 220 PPEAFME--GIFTSKTDTWSFGVLLWEIFSLG-------------YMPYPSKSNQEVLEF 264
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ G + K + + C Q+ P DRP ++E +E
Sbjct: 265 V-TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 20/148 (13%)
Query: 30 IKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARG 89
+ V+ E KG + ++ E+++ GSL ++ + L + L K ++ +
Sbjct: 80 LGVIVEEKGGLY------IVTEYMAKGSLVDYLRSR----GRSVLGGDCLLKFSLDVCEA 129
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYI 149
+EYL +H D+ N+L+ ED K+SDFGL K E+ + + V +
Sbjct: 130 MEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWT 181
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEM 177
APE + S KSDV+S+G++++E+
Sbjct: 182 APEALREK--KFSTKSDVWSFGILLWEI 207
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLA---- 178
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 179 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 222
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E+V +L ++ + P+ + ++ IA + L+ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---------IADACQALNFSHQNGIIHRDVK 143
Query: 108 PHNILLDEDFCPKISDFGLAK-ICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
P NI++ K+ DFG+A+ I S+ GT Y++PE + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 167 VYSYGMMVFE-MTG 179
VYS G +++E +TG
Sbjct: 202 VYSLGCVLYEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E+V +L ++ + P+ + ++ IA + L+ I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---------IADACQALNFSHQNGIIHRDVK 143
Query: 108 PHNILLDEDFCPKISDFGLAK-ICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
P NI++ K+ DFG+A+ I S+ GT Y++PE + V +SD
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 201
Query: 167 VYSYGMMVFE-MTG 179
VYS G +++E +TG
Sbjct: 202 VYSLGCVLYEVLTG 215
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 31/224 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRG 96
G + R ++ E ++ G L+ F+ E P + L L +A IA G +YL
Sbjct: 100 GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE- 158
Query: 97 CNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRESIVSMTG-ARGTVGYI 149
+H DI N LL CP KI DFG+A+ + R S G A V ++
Sbjct: 159 --NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWM 212
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED 209
PE F G + K+D +S+G++++E+ + Y P+ E+ E
Sbjct: 213 PPEAFME--GIFTSKTDTWSFGVLLWEIFSLG-------------YMPYPSKSNQEVLEF 257
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ G + K + + C Q+ P DRP ++E +E
Sbjct: 258 V-TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 149 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 201
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 202 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNMTVDIWSVGCIMAEL 245
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 20/148 (13%)
Query: 30 IKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARG 89
+ V+ E KG + ++ E+++ GSL ++ + L + L K ++ +
Sbjct: 65 LGVIVEEKGGLY------IVTEYMAKGSLVDYLRSR----GRSVLGGDCLLKFSLDVCEA 114
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYI 149
+EYL +H D+ N+L+ ED K+SDFGL K E+ + + V +
Sbjct: 115 MEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWT 166
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEM 177
APE + S KSDV+S+G++++E+
Sbjct: 167 APEALREK--KFSTKSDVWSFGILLWEI 192
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 31/224 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRG 96
G + R ++ E ++ G L+ F+ E P + L L +A IA G +YL
Sbjct: 100 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE- 158
Query: 97 CNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRESIVSMTG-ARGTVGYI 149
+H DI N LL CP KI DFG+A+ + R S G A V ++
Sbjct: 159 --NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWM 212
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED 209
PE F G + K+D +S+G++++E+ + Y P+ E+ E
Sbjct: 213 PPEAFME--GIFTSKTDTWSFGVLLWEIFSLG-------------YMPYPSKSNQEVLEF 257
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ G + K + + C Q+ P DRP ++E +E
Sbjct: 258 V-TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 31/224 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRG 96
G + R ++ E ++ G L+ F+ E P + L L +A IA G +YL
Sbjct: 101 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE- 159
Query: 97 CNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRESIVSMTG-ARGTVGYI 149
+H DI N LL CP KI DFG+A+ + R S G A V ++
Sbjct: 160 --NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMAQDIY-RASYYRKGGCAMLPVKWM 213
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED 209
PE F G + K+D +S+G++++E+ + Y P+ E+ E
Sbjct: 214 PPEAFME--GIFTSKTDTWSFGVLLWEIFSLG-------------YMPYPSKSNQEVLEF 258
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ G + K + + C Q+ P DRP ++E +E
Sbjct: 259 V-TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLA---- 174
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 175 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 218
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 43/217 (19%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ EF+ NG+L+ F+ L Q + L + GIA G+ YL +H D+
Sbjct: 94 ILTEFMENGALDSFLR----LNDGQFTVIQ-LVGMLRGIASGMRYL---AEMSYVHRDLA 145
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMT---GARGTVGYIAPEVFCRNFGEVSYK 164
NIL++ + K+SDFGL++ S + T G + + + APE F + +
Sbjct: 146 ARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA--FRKFTSA 203
Query: 165 SDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEY- 223
SD +SYG++++E+ P+W D+ Q + N +++Y
Sbjct: 204 SDAWSYGIVMWEVMSFGER-------------PYW---------DMSNQDVINAIEQDYR 241
Query: 224 -------ARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ + L C Q + + RP +VV L+
Sbjct: 242 LPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 278
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 178
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 179 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 222
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 31/224 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRG 96
G + R ++ E ++ G L+ F+ E P + L L +A IA G +YL
Sbjct: 115 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE- 173
Query: 97 CNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRESIVSMTG-ARGTVGYI 149
+H DI N LL CP KI DFG+A+ + R S G A V ++
Sbjct: 174 --NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWM 227
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED 209
PE F G + K+D +S+G++++E+ + Y P+ E+ E
Sbjct: 228 PPEAFME--GIFTSKTDTWSFGVLLWEIFSLG-------------YMPYPSKSNQEVLEF 272
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ G + K + + C Q+ P DRP ++E +E
Sbjct: 273 V-TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 114
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC--HGRESIVSMTG 141
G+ YLH I H DIKP N+LLDE KISDFGLA + + RE +++
Sbjct: 115 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 142 ARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 168 --GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 200
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 174
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 175 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 218
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 130 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 182
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 183 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 226
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 13/129 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+++E V+ G + + K E + ++ L K G+EYLH +I+H DIK
Sbjct: 115 MVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIK-------GIEYLHY---QKIIHRDIK 164
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS-D 166
P N+L+ ED KI+DFG++ G ++++S T GT ++APE S K+ D
Sbjct: 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT--VGTPAFMAPESLSETRKIFSGKALD 222
Query: 167 VYSYGMMVF 175
V++ G+ ++
Sbjct: 223 VWAMGVTLY 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 177
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 178 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 184
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 185 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 119 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 171
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 172 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 215
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 184
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 185 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 184
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 185 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 228
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 174
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 175 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 218
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 115
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC--HGRESIVSMTG 141
G+ YLH I H DIKP N+LLDE KISDFGLA + + RE +++
Sbjct: 116 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 142 ARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 169 --GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 201
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 178
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 179 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 222
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 31/224 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRG 96
G + R ++ E ++ G L+ F+ E P + L L +A IA G +YL
Sbjct: 117 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE-- 174
Query: 97 CNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRESIVSMTG-ARGTVGYI 149
+H DI N LL CP KI DFG+A+ + R S G A V ++
Sbjct: 175 -ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWM 229
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED 209
PE F G + K+D +S+G++++E+ + Y P+ E+ E
Sbjct: 230 PPEAFME--GIFTSKTDTWSFGVLLWEIFSLG-------------YMPYPSKSNQEVLEF 274
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+ G + K + + C Q+ P DRP ++E +E
Sbjct: 275 V-TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 127 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 179
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 180 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 223
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 114
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC--HGRESIVSMTG 141
G+ YLH I H DIKP N+LLDE KISDFGLA + + RE +++
Sbjct: 115 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 142 ARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 168 --GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 200
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 58 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 113
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC--HGRESIVSMTG 141
G+ YLH I H DIKP N+LLDE KISDFGLA + + RE +++
Sbjct: 114 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 166
Query: 142 ARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 167 --GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 199
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 114
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC--HGRESIVSMTG 141
G+ YLH I H DIKP N+LLDE KISDFGLA + + RE +++
Sbjct: 115 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 142 ARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 168 --GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 200
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 178
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 179 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 139 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 191
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 192 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 235
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 174
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 175 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 125 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 177
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 178 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 221
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 192
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 193 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 236
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 114
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC--HGRESIVSMTG 141
G+ YLH I H DIKP N+LLDE KISDFGLA + + RE +++
Sbjct: 115 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 142 ARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 168 --GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 200
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 115
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC--HGRESIVSMTG 141
G+ YLH I H DIKP N+LLDE KISDFGLA + + RE +++
Sbjct: 116 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 142 ARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 169 --GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 201
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 131 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 183
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 184 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 227
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 24/147 (16%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH----RGCNTR--I 101
L+ E+ NGSL K++ L T+ W ++A + RGL YLH RG + + I
Sbjct: 89 LVMEYYPNGSLXKYL----SLHTSD---WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141
Query: 102 LHFDIKPHNILLDEDFCPKISDFGLA------KICHGRESIVSMTGARGTVGYIAPEVF- 154
H D+ N+L+ D ISDFGL+ ++ E + GT+ Y+APEV
Sbjct: 142 SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLE 201
Query: 155 ----CRNFGEVSYKSDVYSYGMMVFEM 177
R+ + D+Y+ G++ +E+
Sbjct: 202 GAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 195
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 196 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 239
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 117 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 169
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 170 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 213
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 20/148 (13%)
Query: 30 IKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARG 89
+ V+ E KG + ++ E+++ GSL ++ + L + L K ++ +
Sbjct: 71 LGVIVEEKGGLY------IVTEYMAKGSLVDYLRSR----GRSVLGGDCLLKFSLDVCEA 120
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYI 149
+EYL +H D+ N+L+ ED K+SDFGL K E+ + + V +
Sbjct: 121 MEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWT 172
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEM 177
APE S KSDV+S+G++++E+
Sbjct: 173 APEALRE--AAFSTKSDVWSFGILLWEI 198
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 139 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 191
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 192 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 235
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 115
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC--HGRESIVSMTG 141
G+ YLH I H DIKP N+LLDE KISDFGLA + + RE +++
Sbjct: 116 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 142 ARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 169 --GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 201
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 115
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC--HGRESIVSMTG 141
G+ YLH I H DIKP N+LLDE KISDFGLA + + RE +++
Sbjct: 116 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 142 ARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 169 --GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 201
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 168
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 169 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 212
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 115
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC--HGRESIVSMTG 141
G+ YLH I H DIKP N+LLDE KISDFGLA + + RE +++
Sbjct: 116 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 142 ARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 169 --GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 201
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 192
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 193 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 236
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 117 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 169
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 170 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 213
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E+V +L ++ + P+ + ++ IA + L+ I+H D+K
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEV---------IADACQALNFSHQNGIIHRDVK 160
Query: 108 PHNILLDEDFCPKISDFGLAK-ICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
P NI++ K+ DFG+A+ I S+ GT Y++PE + V +SD
Sbjct: 161 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSD 218
Query: 167 VYSYGMMVFE-MTG 179
VYS G +++E +TG
Sbjct: 219 VYSLGCVLYEVLTG 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 118 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 170
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 171 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA G+ YL
Sbjct: 81 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGMNYLE-- 131
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFGLAK+ E G + + ++A E
Sbjct: 132 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 190
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 191 RI--YTHQSDVWSYGVTVWEL 209
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 168
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 169 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 212
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 114
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR 143
G+ YLH I H DIKP N+LLDE KISDFGLA + +
Sbjct: 115 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 144 GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 168 GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLA 202
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 20/148 (13%)
Query: 30 IKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARG 89
+ V+ E KG + ++ E+++ GSL ++ + L + L K ++ +
Sbjct: 252 LGVIVEEKGGLY------IVTEYMAKGSLVDYLRSR----GRSVLGGDCLLKFSLDVCEA 301
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYI 149
+EYL +H D+ N+L+ ED K+SDFGL K E+ + + V +
Sbjct: 302 MEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWT 353
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEM 177
APE + S KSDV+S+G++++E+
Sbjct: 354 APEALREK--KFSTKSDVWSFGILLWEI 379
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 93/224 (41%), Gaps = 31/224 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRG 96
G + R ++ E ++ G L+ F+ E P + L L +A IA G +YL
Sbjct: 127 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE-- 184
Query: 97 CNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRESIVSMTG-ARGTVGYI 149
+H DI N LL CP KI DFG+A+ + R S G A V ++
Sbjct: 185 -ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIY-RASYYRKGGCAMLPVKWM 239
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED 209
PE F G + K+D +S+G++++E+ + Y P+ E+ E
Sbjct: 240 PPEAFME--GIFTSKTDTWSFGVLLWEIFSLG-------------YMPYPSKSNQEVLE- 283
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
G + K + + C Q+ P DRP ++E +E
Sbjct: 284 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 115
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR 143
G+ YLH I H DIKP N+LLDE KISDFGLA + +
Sbjct: 116 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 144 GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 169 GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLA 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 114
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR 143
G+ YLH I H DIKP N+LLDE KISDFGLA + +
Sbjct: 115 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 144 GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 168 GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLA 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 114
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR 143
G+ YLH I H DIKP N+LLDE KISDFGLA + +
Sbjct: 115 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 144 GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 168 GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 200
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I GLE++H N +++ D+KP NILLDE +ISD GLA ++ S+
Sbjct: 297 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 350
Query: 143 RGTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
GT GY+APEV + V+Y S D +S G M+F++
Sbjct: 351 -GTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKL 383
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 93/224 (41%), Gaps = 26/224 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEK-HPLET-------NQKLKWEVLYKIAVGIARG 89
G C G +I E+ G L F+ K LET N L + +A+G
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQG 176
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYI 149
+ +L + +H D+ N+LL KI DFGLA+ + + AR V ++
Sbjct: 177 MAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 233
Query: 150 APEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEED 209
APE V +SDV+SYG++++E+ + N + +S+ Y +L +D
Sbjct: 234 APESIFDCVYTV--QSDVWSYGILLWEIFSLGLNPYPGILVNSKFY---------KLVKD 282
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
G + + + + + C P+ RP ++ L+
Sbjct: 283 ----GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I GLE++H N +++ D+KP NILLDE +ISD GLA ++ S+
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 143 RGTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
GT GY+APEV + V+Y S D +S G M+F++
Sbjct: 352 -GTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKL 384
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I GLE++H N +++ D+KP NILLDE +ISD GLA ++ S+
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 143 RGTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
GT GY+APEV + V+Y S D +S G M+F++
Sbjct: 352 -GTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKL 384
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I GLE++H N +++ D+KP NILLDE +ISD GLA ++ S+
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 143 RGTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
GT GY+APEV + V+Y S D +S G M+F++
Sbjct: 352 -GTHGYMAPEVLQKG---VAYDSSADWFSLGCMLFKL 384
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 31 KVLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIA 83
K+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLM 114
Query: 84 VGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR 143
G+ YLH I H DIKP N+LLDE KISDFGLA + +
Sbjct: 115 AGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 144 GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 168 GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 200
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 20/138 (14%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L+ EF GS+ I LK E + I I RGL +LH+ +++H DIK
Sbjct: 104 LVMEFCGAGSVTDLIKNT----KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIK 156
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR----GTVGYIAPEVF-CRNFGEVS 162
N+LL E+ K+ DFG++ + G R GT ++APEV C + +
Sbjct: 157 GQNVLLTENAEVKLVDFGVSA------QLDRTVGRRNTFIGTPYWMAPEVIACDENPDAT 210
Query: 163 Y--KSDVYSYGMMVFEMT 178
Y KSD++S G+ EM
Sbjct: 211 YDFKSDLWSLGITAIEMA 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 102/228 (44%), Gaps = 33/228 (14%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLK----WEVLYKIAVGIARGLEYL 93
G +G ++ E +++G L+ ++ P N + + + ++A IA G+ YL
Sbjct: 87 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 146
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H ++ N ++ DF KI DFG+ + + E+ G +G V ++AP
Sbjct: 147 NA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWMAP 201
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLG 211
E G + SD++S+G++++E+T + Y+ L E+ L
Sbjct: 202 ESL--KDGVFTTSSDMWSFGVVLWEITSLAEQP----------------YQGLSNEQVLK 243
Query: 212 L---QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSL 256
G ++ D R L+ + C Q NP+ RP +V +L+ L
Sbjct: 244 FVMDGGYLDQPDNCPERVTDLMRM-CWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 102/228 (44%), Gaps = 33/228 (14%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLK----WEVLYKIAVGIARGLEYL 93
G +G ++ E +++G L+ ++ P N + + + ++A IA G+ YL
Sbjct: 88 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 147
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H ++ N ++ DF KI DFG+ + + E+ G +G V ++AP
Sbjct: 148 NA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWMAP 202
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLG 211
E G + SD++S+G++++E+T + Y+ L E+ L
Sbjct: 203 ESL--KDGVFTTSSDMWSFGVVLWEITSLAEQP----------------YQGLSNEQVLK 244
Query: 212 L---QGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSL 256
G ++ D R L+ + C Q NP+ RP +V +L+ L
Sbjct: 245 FVMDGGYLDQPDNCPERVTDLMRM-CWQFNPNMRPTFLEIVNLLKDDL 291
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRG 96
G + R ++ E ++ G L+ F+ E P + L L +A IA G +YL
Sbjct: 118 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE-- 175
Query: 97 CNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRESIVSMTGARGTVGYIA 150
+H DI N LL CP KI DFG+A+ + A V ++
Sbjct: 176 -ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 151 PEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDL 210
PE F G + K+D +S+G++++E+ + Y P+ E+ E +
Sbjct: 232 PEAFME--GIFTSKTDTWSFGVLLWEIFSLG-------------YMPYPSKSNQEVLEFV 276
Query: 211 GLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
G + K + + C Q+ P DRP ++E +E
Sbjct: 277 -TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 29/223 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETN-QKLKWEVLYKIAVGIARGLEYLHRG 96
G + R ++ E ++ G L+ F+ E P + L L +A IA G +YL
Sbjct: 141 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE- 199
Query: 97 CNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRESIVSMTGARGTVGYIA 150
+H DI N LL CP KI DFG+A+ + A V ++
Sbjct: 200 --NHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 151 PEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDL 210
PE F G + K+D +S+G++++E+ + Y P+ E+ E +
Sbjct: 255 PEAFME--GIFTSKTDTWSFGVLLWEIFSLG-------------YMPYPSKSNQEVLEFV 299
Query: 211 GLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
G + K + + C Q+ P DRP ++E +E
Sbjct: 300 -TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
Query: 71 NQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC 130
+Q L E + + + RGL+Y+H + I+H D+KP N+ ++ED +I DFGLA
Sbjct: 125 SQALSDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLA--- 178
Query: 131 HGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R++ MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 179 --RQADEEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 222
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 37 KGFCFEGHRRA--LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C + ++ L+ E+V GSL ++ +H + Q L A I G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQ------LLLFAQQICEGMAYLH 129
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICHGRESIVSMTGARGTVGYIAPEV 153
+H + N+LLD D KI DFGLAK + G E V + APE
Sbjct: 130 ---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE- 185
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
C + Y SDV+S+G+ ++E+
Sbjct: 186 -CLKECKFYYASDVWSFGVTLYEL 208
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 37 KGFCFEGHRRA--LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
KG C + ++ L+ E+V GSL ++ +H + Q L A I G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQ------LLLFAQQICEGMAYLH 128
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICHGRESIVSMTGARGTVGYIAPEV 153
+H + N+LLD D KI DFGLAK + G E V + APE
Sbjct: 129 ---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE- 184
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
C + Y SDV+S+G+ ++E+
Sbjct: 185 -CLKECKFYYASDVWSFGVTLYEL 207
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 85/220 (38%), Gaps = 50/220 (22%)
Query: 35 ETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
+ +G H L+ E+ + + K PL+ + + + G +GL YLH
Sbjct: 118 QYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVE------IAAVTHGALQGLAYLH 171
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEV- 153
+ ++H D+K NILL E K+ DFG A I V GT ++APEV
Sbjct: 172 ---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVI 222
Query: 154 FCRNFGEVSYKSDVYSYGMM----------VFEMTGVKNNANVAVDRSSEIYFPHWVYKR 203
+ G+ K DV+S G+ +F M + ++A + S + HW
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---- 278
Query: 204 LELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRP 243
EY R + C+Q P DRP
Sbjct: 279 -----------------SEYFRNFVDS---CLQKIPQDRP 298
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 85/178 (47%), Gaps = 28/178 (15%)
Query: 47 ALIYEFVSNGSLEKFIYEKHP------LETNQKLKWEV----LYKIAVGIARGLEYLHRG 96
++I+ + S+G L +F+ + P + ++ +K + + IA G+EYL
Sbjct: 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL--- 161
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ ++H D+ N+L+ + KISD GL + + + + + + ++APE
Sbjct: 162 SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM- 220
Query: 157 NFGEVSYKSDVYSYGMMVFEM--------TGVKNNANVAVDRSSEIY-----FPHWVY 201
+G+ S SD++SYG++++E+ G N V + R+ ++ P WVY
Sbjct: 221 -YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVY 277
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA R + MTG T
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVAT 181
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
Y APE+ N+ + D++S G ++ E+
Sbjct: 182 RWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 212
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDE-----DFCPKISDFGLAK-ICHGRESIVSMTGA 142
GL +LH + I+H D+KPHNIL+ ISDFGL K + GR S +G
Sbjct: 130 GLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 143 RGTVGYIAPEVFCRNFGE-VSYKSDVYSYGMMVF 175
GT G+IAPE+ + E +Y D++S G + +
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFY 220
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+A+G+ +L + +H D+ NILL KI DFGLA+ + V AR
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 146 VGYIAPEVFCRNFGEV-SYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRL 204
V ++APE F V +++SDV+SYG+ ++E+ + ++ + S+ Y
Sbjct: 234 VKWMAPESI---FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY--------- 281
Query: 205 ELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSL 256
+ +G + +M + C +P RP ++V+++E +
Sbjct: 282 ----KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 329
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
Q L E + + + RGL+Y+H + I+H D+KP N+ ++ED +I DFGLA
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLA---- 178
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R++ MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 179 -RQADEEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 222
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Query: 53 VSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNIL 112
+ + SL+KF K ++ Q + ++L KIAV I + LE+LH + ++H D+KP N+L
Sbjct: 114 LXDTSLDKFY--KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVL 169
Query: 113 LDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSY--KSDVYSY 170
++ K DFG++ V+ G Y APE + Y KSD++S
Sbjct: 170 INALGQVKXCDFGISGYLVDD---VAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSL 226
Query: 171 GMMVFEMT 178
G+ E+
Sbjct: 227 GITXIELA 234
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+A+G+ +L + +H D+ NILL KI DFGLA+ + V AR
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 146 VGYIAPEVFCRNFGEV-SYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRL 204
V ++APE F V +++SDV+SYG+ ++E+ + ++ + S+ Y
Sbjct: 234 VKWMAPESI---FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY--------- 281
Query: 205 ELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSL 256
+ +G + +M + C +P RP ++V+++E +
Sbjct: 282 ----KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 329
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
Q L E + + + RGL+Y+H + I+H D+KP N+ ++ED +I DFGLA
Sbjct: 118 QALSDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLA---- 170
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R++ MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 171 -RQADEEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 214
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+A+G+ +L + +H D+ NILL KI DFGLA+ + V AR
Sbjct: 172 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 146 VGYIAPEVFCRNFGEV-SYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRL 204
V ++APE F V +++SDV+SYG+ ++E+ + ++ + S+ Y
Sbjct: 229 VKWMAPESI---FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY--------- 276
Query: 205 ELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSL 256
+ +G + +M + C +P RP ++V+++E +
Sbjct: 277 ----KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 324
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 27/153 (17%)
Query: 28 VAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIAVG 85
VA+ + E+ G + LI + VS G L I EK + +L ++VL
Sbjct: 79 VALDDIYESGGHLY------LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL------ 126
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNIL---LDEDFCPKISDFGLAKICHGRESIVSMTGA 142
++YLH + I+H D+KP N+L LDED ISDFGL+K+ + ++ A
Sbjct: 127 --DAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTA 178
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
GT GY+APEV + S D +S G++ +
Sbjct: 179 CGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAY 209
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLA-KICHGRESIVSMTGARG 144
I G +YLHR R++H D+K N+ L+ED KI DFGLA K+ + E ++ G
Sbjct: 130 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC---G 183
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRL 204
T YIAPEV + G S++ DV+S G +++ + K + + + Y R+
Sbjct: 184 TPNYIAPEVLSKK-GH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKET--------YLRI 233
Query: 205 ELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE---MLEGSLDS--- 258
+ E + I N +KM +Q +P+ RP +N ++ G + +
Sbjct: 234 KKNEYSIPKHI-NPVAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYIPARLP 285
Query: 259 ---LRIPPRPFLLSSGSQPDSSGTLV 281
L IPPR + S P + L
Sbjct: 286 ITCLTIPPRFSIAPSSLDPSNRKPLT 311
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP-LETNQKLKWEVLYKI---AVGIARGLEYL 93
G +G +I E ++ G L+ ++ P +E N L L K+ A IA G+ YL
Sbjct: 80 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 139
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ EDF KI DFG+ + E+ G +G V +++P
Sbjct: 140 N---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX--ETDXXRKGGKGLLPVRWMSP 194
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMT 178
E G + SDV+S+G++++E+
Sbjct: 195 ESL--KDGVFTTYSDVWSFGVVLWEIA 219
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 20/172 (11%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+A+G+ +L + +H D+ NILL KI DFGLA+ + V AR
Sbjct: 154 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 146 VGYIAPEVFCRNFGEV-SYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRL 204
V ++APE F V +++SDV+SYG+ ++E+ + ++ + S+ Y
Sbjct: 211 VKWMAPESI---FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY--------K 259
Query: 205 ELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSL 256
++E + E+ + Y I+ + W +P RP ++V+++E +
Sbjct: 260 MIKEGFRMLSPEHAPAEMYD---IMKTCW--DADPLKRPTFKQIVQLIEKQI 306
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI D+GLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 85/178 (47%), Gaps = 28/178 (15%)
Query: 47 ALIYEFVSNGSLEKFIYEKHP------LETNQKLKWEV----LYKIAVGIARGLEYLHRG 96
++I+ + S+G L +F+ + P + ++ +K + + IA G+EYL
Sbjct: 88 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL--- 144
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ ++H D+ N+L+ + KISD GL + + + + + + ++APE
Sbjct: 145 SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM- 203
Query: 157 NFGEVSYKSDVYSYGMMVFEM--------TGVKNNANVAVDRSSEIY-----FPHWVY 201
+G+ S SD++SYG++++E+ G N V + R+ ++ P WVY
Sbjct: 204 -YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVY 260
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLA-KICHGRESIVSMTGARG 144
I G +YLHR R++H D+K N+ L+ED KI DFGLA K+ + E ++ G
Sbjct: 126 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC---G 179
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRL 204
T YIAPEV + G S++ DV+S G +++ + K + + + Y R+
Sbjct: 180 TPNYIAPEVLSKK-GH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKET--------YLRI 229
Query: 205 ELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE---MLEGSLDS--- 258
+ E + I N +KM +Q +P+ RP +N ++ G + +
Sbjct: 230 KKNEYSIPKHI-NPVAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYIPARLP 281
Query: 259 ---LRIPPRPFLLSSGSQPDSSGTLV 281
L IPPR + S P + L
Sbjct: 282 ITCLTIPPRFSIAPSSLDPSNRKPLT 307
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 85/221 (38%), Gaps = 50/221 (22%)
Query: 35 ETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
+ +G H L+ E+ + + K PL+ + + + G +GL YLH
Sbjct: 79 QYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVE------IAAVTHGALQGLAYLH 132
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEV- 153
+ ++H D+K NILL E K+ DFG A I V GT ++APEV
Sbjct: 133 ---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVI 183
Query: 154 FCRNFGEVSYKSDVYSYGMM----------VFEMTGVKNNANVAVDRSSEIYFPHWVYKR 203
+ G+ K DV+S G+ +F M + ++A + S + HW
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---- 239
Query: 204 LELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPA 244
EY R + C+Q P DRP
Sbjct: 240 -----------------SEYFRNFVDS---CLQKIPQDRPT 260
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 86 GICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 136
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFG AK+ E G + + ++A E
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 196 RI--YTHQSDVWSYGVTVWEL 214
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+A+G+ +L + +H D+ NILL KI DFGLA+ + V AR
Sbjct: 170 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 146 VGYIAPEVFCRNFGEV-SYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRL 204
V ++APE F V +++SDV+SYG+ ++E+ + ++ + S+ Y
Sbjct: 227 VKWMAPESI---FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY--------- 274
Query: 205 ELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSL 256
+ +G + +M + C +P RP ++V+++E +
Sbjct: 275 ----KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 322
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 86 GICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 136
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFG AK+ E G + + ++A E
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 196 RI--YTHQSDVWSYGVTVWEL 214
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLA-KICHGRESIVSMTGARG 144
I G +YLHR R++H D+K N+ L+ED KI DFGLA K+ + E ++ G
Sbjct: 126 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC---G 179
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T YIAPEV + G S++ DV+S G +++ +
Sbjct: 180 TPNYIAPEVLSKK-GH-SFEVDVWSIGCIMYTL 210
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NAMHYNQTVDIWSVGCIMAEL 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 17/97 (17%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR-- 143
I G +YLHR R++H D+K N+ L+ED KI DFGLA + V G R
Sbjct: 148 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKK 197
Query: 144 ---GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT YIAPEV + G S++ DV+S G +++ +
Sbjct: 198 VLCGTPNYIAPEVLSKK-GH-SFEVDVWSIGCIMYTL 232
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP-LETNQKLKWEVLYKI---AVGIARGLEYL 93
G +G +I E ++ G L+ ++ P +E N L L K+ A IA G+ YL
Sbjct: 88 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 147
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +++P
Sbjct: 148 NA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWMSP 202
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMT 178
E G + SDV+S+G++++E+
Sbjct: 203 ESL--KDGVFTTYSDVWSFGVVLWEIA 227
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 88 GICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 138
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFG AK+ E G + + ++A E
Sbjct: 139 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 198 RI--YTHQSDVWSYGVTVWEL 216
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 192
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + M G T Y APE+ N+ + D++S G ++ E+
Sbjct: 193 -RHTDDEMXGXVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 17/97 (17%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR-- 143
I G +YLHR R++H D+K N+ L+ED KI DFGLA + V G R
Sbjct: 150 IVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKK 199
Query: 144 ---GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT YIAPEV + S++ DV+S G +++ +
Sbjct: 200 VLCGTPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTL 234
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 16/130 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I +++ G L L +Q+ V A + LEYLH + I++ D+K
Sbjct: 83 MIMDYIEGGELFSL------LRKSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLK 133
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
P NILLD++ KI+DFG AK + GT YIAPEV + D
Sbjct: 134 PENILLDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDYIAPEVVSTK--PYNKSIDW 186
Query: 168 YSYGMMVFEM 177
+S+G++++EM
Sbjct: 187 WSFGILIYEM 196
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 27/153 (17%)
Query: 28 VAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIAVG 85
VA+ + E+ G + LI + VS G L I EK + +L ++VL
Sbjct: 79 VALDDIYESGGHLY------LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL------ 126
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNIL---LDEDFCPKISDFGLAKICHGRESIVSMTGA 142
++YLH + I+H D+KP N+L LDED ISDFGL+K+ + ++ A
Sbjct: 127 --DAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTA 178
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
GT GY+APEV + S D +S G++ +
Sbjct: 179 CGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAY 209
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 27/153 (17%)
Query: 28 VAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIAVG 85
VA+ + E+ G + LI + VS G L I EK + +L ++VL
Sbjct: 79 VALDDIYESGGHLY------LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL------ 126
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNIL---LDEDFCPKISDFGLAKICHGRESIVSMTGA 142
++YLH + I+H D+KP N+L LDED ISDFGL+K+ + ++ A
Sbjct: 127 --DAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTA 178
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
GT GY+APEV + S D +S G++ +
Sbjct: 179 CGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAY 209
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 23/136 (16%)
Query: 47 ALIYEFVSNG---SLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILH 103
L++E V L+K P ET + + +++L RGL++LH + R++H
Sbjct: 95 TLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL--------RGLDFLH---SHRVVH 143
Query: 104 FDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSY 163
D+KP NIL+ K++DFGLA+I + +++T T+ Y APEV ++ SY
Sbjct: 144 RDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQS----SY 196
Query: 164 KS--DVYSYGMMVFEM 177
+ D++S G + EM
Sbjct: 197 ATPVDLWSVGCIFAEM 212
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 86 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 136
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFG AK+ E G + + ++A E
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 196 RI--YTHQSDVWSYGVTVWEL 214
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP-LETNQKLKWEVLYKI---AVGIARGLEYL 93
G +G +I E ++ G L+ ++ P +E N L L K+ A IA G+ YL
Sbjct: 82 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 141
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +++P
Sbjct: 142 N---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWMSP 196
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMT 178
E G + SDV+S+G++++E+
Sbjct: 197 ESL--KDGVFTTYSDVWSFGVVLWEIA 221
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP-LETNQKLKWEVLYKI---AVGIARGLEYL 93
G +G +I E ++ G L+ ++ P +E N L L K+ A IA G+ YL
Sbjct: 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 154
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +++P
Sbjct: 155 N---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWMSP 209
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMT 178
E G + SDV+S+G++++E+
Sbjct: 210 ESL--KDGVFTTYSDVWSFGVVLWEIA 234
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 23/136 (16%)
Query: 47 ALIYEFVSNG---SLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILH 103
L++E V L+K P ET + + +++L RGL++LH + R++H
Sbjct: 95 TLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL--------RGLDFLH---SHRVVH 143
Query: 104 FDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSY 163
D+KP NIL+ K++DFGLA+I + +++T T+ Y APEV ++ SY
Sbjct: 144 RDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQS----SY 196
Query: 164 KS--DVYSYGMMVFEM 177
+ D++S G + EM
Sbjct: 197 ATPVDLWSVGCIFAEM 212
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 71 NQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC 130
+QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGL
Sbjct: 119 SQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLC--- 172
Query: 131 HGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 --RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I F+ +G L F+ E L + L + V IA G+EYL + +H D+
Sbjct: 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLA 164
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
N +L ED ++DFGL++ + + ++ V ++A E N V SDV
Sbjct: 165 ARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTV--HSDV 222
Query: 168 YSYGMMVFEMTGVKNNANVAVDRSSEIY 195
+++G+ ++E+ + A ++EIY
Sbjct: 223 WAFGVTMWEIM-TRGQTPYAGIENAEIY 249
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 23/136 (16%)
Query: 47 ALIYEFVSNG---SLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILH 103
L++E V L+K P ET + + +++L RGL++LH + R++H
Sbjct: 95 TLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL--------RGLDFLH---SHRVVH 143
Query: 104 FDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSY 163
D+KP NIL+ K++DFGLA+I + +++T T+ Y APEV ++ SY
Sbjct: 144 RDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQS----SY 196
Query: 164 KS--DVYSYGMMVFEM 177
+ D++S G + EM
Sbjct: 197 ATPVDLWSVGCIFAEM 212
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP-LETNQKLKWEVLYKI---AVGIARGLEYL 93
G +G +I E ++ G L+ ++ P +E N L L K+ A IA G+ YL
Sbjct: 89 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 148
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ EDF KI DFG+ + E+ G +G V +++P
Sbjct: 149 N---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX--ETDXXRKGGKGLLPVRWMSP 203
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMT 178
E G + SDV+S+G++++E+
Sbjct: 204 ESL--KDGVFTTYSDVWSFGVVLWEIA 228
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 17/97 (17%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR-- 143
I G +YLHR R++H D+K N+ L+ED KI DFGLA + V G R
Sbjct: 124 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKK 173
Query: 144 ---GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT YIAPEV + G S++ DV+S G +++ +
Sbjct: 174 VLCGTPNYIAPEVLSKK-GH-SFEVDVWSIGCIMYTL 208
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 91 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 141
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFG AK+ E G + + ++A E
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 201 RI--YTHQSDVWSYGVTVWEL 219
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIARGLEYLHRG 96
G C + LI + + G L ++ E K + + L W V IA+G+ YL
Sbjct: 84 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE-- 134
Query: 97 CNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
+ R++H D+ N+L+ KI+DFG AK+ E G + + ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+++SDV+SYG+ V+E+
Sbjct: 194 RI--YTHQSDVWSYGVTVWEL 212
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 27/153 (17%)
Query: 28 VAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIAVG 85
VA+ + E+ G + LI + VS G L I EK + +L ++VL
Sbjct: 79 VALDDIYESGGHLY------LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVL------ 126
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNIL---LDEDFCPKISDFGLAKICHGRESIVSMTGA 142
++YLH + I+H D+KP N+L LDED ISDFGL+K+ + ++ A
Sbjct: 127 --DAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTA 178
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
GT GY+APEV + S D +S G++ +
Sbjct: 179 CGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAY 209
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP-LETNQKLKWEVLYKI---AVGIARGLEYL 93
G +G +I E ++ G L+ ++ P +E N L L K+ A IA G+ YL
Sbjct: 86 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 145
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +++P
Sbjct: 146 N---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWMSP 200
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMT 178
E G + SDV+S+G++++E+
Sbjct: 201 ESL--KDGVFTTYSDVWSFGVVLWEIA 225
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP-LETNQKLKWEVLYKI---AVGIARGLEYL 93
G +G +I E ++ G L+ ++ P +E N L L K+ A IA G+ YL
Sbjct: 88 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 147
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +++P
Sbjct: 148 N---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWMSP 202
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMT 178
E G + SDV+S+G++++E+
Sbjct: 203 ESL--KDGVFTTYSDVWSFGVVLWEIA 227
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP-LETNQKLKWEVLYKI---AVGIARGLEYL 93
G +G +I E ++ G L+ ++ P +E N L L K+ A IA G+ YL
Sbjct: 89 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 148
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +++P
Sbjct: 149 N---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWMSP 203
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMT 178
E G + SDV+S+G++++E+
Sbjct: 204 ESL--KDGVFTTYSDVWSFGVVLWEIA 228
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L+ E G L KF+ K E E+L+++++G ++YL +H ++
Sbjct: 412 LVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMG----MKYLE---EKNFVHRNLA 463
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA-RGTVGYIAPEVFCRNFGEVSYKSD 166
N+LL KISDFGL+K +S + A + + + APE C NF + S +SD
Sbjct: 464 ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE--CINFRKFSSRSD 521
Query: 167 VYSYGMMVFE 176
V+SYG+ ++E
Sbjct: 522 VWSYGVTMWE 531
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHR---GCNTRILHF 104
++ E+ G L I + + Q L E + ++ + L+ HR G +T +LH
Sbjct: 84 IVMEYCEGGDLASVITKG--TKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT-VLHR 140
Query: 105 DIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSY- 163
D+KP N+ LD K+ DFGLA+I + S GT Y++PE R +SY
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK--AFVGTPYYMSPEQMNR----MSYN 194
Query: 164 -KSDVYSYGMMVFEMTGV 180
KSD++S G +++E+ +
Sbjct: 195 EKSDIWSLGCLLYELCAL 212
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + M G T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMAGFVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + M G T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMAGFVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 32 VLNETKGFCFEGHRRA-----LIYEFVSNGSLEKFIYEK--HPLETNQKLKWEVLYKIAV 84
+LN F GHRR L E+ S G L I P Q+ +++
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF----FHQLMA 116
Query: 85 GIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC--HGRESIVSMTGA 142
G+ YLH I H DIKP N+LLDE KISDFGLA + + RE +++
Sbjct: 117 GVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC- 168
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R DV+S G+++ M
Sbjct: 169 -GTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 201
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 102/248 (41%), Gaps = 60/248 (24%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 76 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 126
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + CH S T GT+ Y+ PE+ R
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSS--RRTTLSGTLDYLPPEMIEGR 182
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 183 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 230
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEGSLDSLRIPPRPFLLS 269
E AR +I +++NPS RP + V+E P++ +
Sbjct: 231 -----------TEGARDLISR---LLKHNPSQRPMLREVLE-------------HPWITA 263
Query: 270 SGSQPDSS 277
+ S+P +S
Sbjct: 264 NSSKPSNS 271
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 195
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + M G T Y APE+ N+ + D++S G ++ E+
Sbjct: 196 -RHTDDEMXGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 239
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP-LETNQKLKWEVLYKI---AVGIARGLEYL 93
G +G +I E ++ G L+ ++ P +E N L L K+ A IA G+ YL
Sbjct: 117 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 176
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT--VGYIAP 151
+ + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +++P
Sbjct: 177 N---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWMSP 231
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMT 178
E G + SDV+S+G++++E+
Sbjct: 232 ESL--KDGVFTTYSDVWSFGVVLWEIA 256
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DFGLA
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA---- 168
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + M G T Y APE+ N+ + D++S G ++ E+
Sbjct: 169 -RHTDDEMAGFVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 212
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 16/133 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
++ E + GSL++ L+ ++ ++L K+++ + +GL YL +I+H D+
Sbjct: 142 SICMEHMDGGSLDQV------LKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDV 193
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA-RGTVGYIAPEVFCRNFGEVSYKS 165
KP NIL++ K+ DFG++ + I SM + GT Y++PE S +S
Sbjct: 194 KPSNILVNSRGEIKLCDFGVSG-----QLIDSMANSFVGTRSYMSPERL--QGTHYSVQS 246
Query: 166 DVYSYGMMVFEMT 178
D++S G+ + EM
Sbjct: 247 DIWSMGLSLVEMA 259
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 22/140 (15%)
Query: 43 GHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRIL 102
G ++ EF+ G+L + + +L E + + + + L YLH ++
Sbjct: 114 GEELWVLMEFLQGGALTDIV-------SQVRLNEEQIATVCEAVLQALAYLH---AQGVI 163
Query: 103 HFDIKPHNILLDEDFCPKISDFG----LAKICHGRESIVSMTGARGTVGYIAPEVFCRNF 158
H DIK +ILL D K+SDFG ++K R+ +V GT ++APEV R+
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV------GTPYWMAPEVISRSL 217
Query: 159 GEVSYKSDVYSYGMMVFEMT 178
+ + D++S G+MV EM
Sbjct: 218 --YATEVDIWSLGIMVIEMV 235
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP-----LETN--QKLKWEVLYKIAVGIARGL 90
G C EG +++E++ +G L KF+ P E N +L + IA IA G+
Sbjct: 82 GVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGM 141
Query: 91 EYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIA 150
YL + +H D+ N L+ E+ KI DFG+++ + + + ++
Sbjct: 142 VYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMP 198
Query: 151 PE-VFCRNFGEVSYKSDVYSYGMMVFEM 177
PE + R F + +SDV+S G++++E+
Sbjct: 199 PESIMYRKF---TTESDVWSLGVVLWEI 223
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKL----KWEVLYKIAVGIARGLEYL 93
G +G +I E ++ G L+ ++ P N + + ++A IA G+ YL
Sbjct: 85 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL 144
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +++P
Sbjct: 145 N---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWMSP 199
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMT 178
E G + SDV+S+G++++E+
Sbjct: 200 ESL--KDGVFTTYSDVWSFGVVLWEIA 224
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L++E V L ++ + P L E + + RGL++LH C I+H D+K
Sbjct: 96 LVFEHVDQ-DLRTYLDKAPP----PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLK 147
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
P NIL+ K++DFGLA+I + +++T T+ Y APEV ++ + D+
Sbjct: 148 PENILVTSGGTVKLADFGLARIYSYQ---MALTPVVVTLWYRAPEVLLQS--TYATPVDM 202
Query: 168 YSYGMMVFEM 177
+S G + EM
Sbjct: 203 WSVGCIFAEM 212
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHR---GCNTRILHF 104
++ E+ G L I + + Q L E + ++ + L+ HR G +T +LH
Sbjct: 84 IVMEYCEGGDLASVITKG--TKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT-VLHR 140
Query: 105 DIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSY- 163
D+KP N+ LD K+ DFGLA+I + E GT Y++PE R +SY
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK--EFVGTPYYMSPEQMNR----MSYN 194
Query: 164 -KSDVYSYGMMVFEMTGV 180
KSD++S G +++E+ +
Sbjct: 195 EKSDIWSLGCLLYELCAL 212
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 18/156 (11%)
Query: 30 IKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIAR 88
+K+L+ F +E + LI EF + G+++ + E + PL +Q + +
Sbjct: 70 VKLLD---AFYYENNLWILI-EFCAGGAVDAVMLELERPLTESQ------IQVVCKQTLD 119
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
L YLH + +I+H D+K NIL D K++DFG++ + R I GT +
Sbjct: 120 ALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRTXIQRRDSFIGTPYW 175
Query: 149 IAPE-VFCRNFGE--VSYKSDVYSYGMMVFEMTGVK 181
+APE V C + YK+DV+S G+ + EM ++
Sbjct: 176 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 211
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHR---GCNTRILHF 104
++ E+ G L I + + Q L E + ++ + L+ HR G +T +LH
Sbjct: 84 IVMEYCEGGDLASVITKG--TKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT-VLHR 140
Query: 105 DIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSY- 163
D+KP N+ LD K+ DFGLA+I + S GT Y++PE R +SY
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNR----MSYN 194
Query: 164 -KSDVYSYGMMVFEMTGV 180
KSD++S G +++E+ +
Sbjct: 195 EKSDIWSLGCLLYELCAL 212
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKL----KWEVLYKIAVGIARGLEYL 93
G +G +I E ++ G L+ ++ P N + + ++A IA G+ YL
Sbjct: 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL 154
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N ++ EDF KI DFG+ + + E+ G +G V +++P
Sbjct: 155 N---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWMSP 209
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMT 178
E G + SDV+S+G++++E+
Sbjct: 210 ESL--KDGVFTTYSDVWSFGVVLWEIA 234
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 16/133 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
++ E + GSL++ L+ ++ ++L K+++ + +GL YL +I+H D+
Sbjct: 107 SICMEHMDGGSLDQV------LKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDV 158
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA-RGTVGYIAPEVFCRNFGEVSYKS 165
KP NIL++ K+ DFG++ + I SM + GT Y++PE S +S
Sbjct: 159 KPSNILVNSRGEIKLCDFGVSG-----QLIDSMANSFVGTRSYMSPERLQGT--HYSVQS 211
Query: 166 DVYSYGMMVFEMT 178
D++S G+ + EM
Sbjct: 212 DIWSMGLSLVEMA 224
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 16/133 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
++ E + GSL++ L+ ++ ++L K+++ + +GL YL +I+H D+
Sbjct: 80 SICMEHMDGGSLDQV------LKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDV 131
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA-RGTVGYIAPEVFCRNFGEVSYKS 165
KP NIL++ K+ DFG++ + I SM + GT Y++PE S +S
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG-----QLIDSMANSFVGTRSYMSPERLQGT--HYSVQS 184
Query: 166 DVYSYGMMVFEMT 178
D++S G+ + EM
Sbjct: 185 DIWSMGLSLVEMA 197
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 16/133 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
++ E + GSL++ L+ ++ ++L K+++ + +GL YL +I+H D+
Sbjct: 80 SICMEHMDGGSLDQV------LKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDV 131
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA-RGTVGYIAPEVFCRNFGEVSYKS 165
KP NIL++ K+ DFG++ + I SM + GT Y++PE S +S
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG-----QLIDSMANSFVGTRSYMSPERLQGT--HYSVQS 184
Query: 166 DVYSYGMMVFEMT 178
D++S G+ + EM
Sbjct: 185 DIWSMGLSLVEMA 197
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 35 ETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
E+ F F L+++ + G L ++ EK L + I + + +LH
Sbjct: 170 ESSSFMF------LVFDLMRKGELFDYLTEKVALSEKET------RSIMRSLLEAVSFLH 217
Query: 95 RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF 154
I+H D+KP NILLD++ ++SDFG + CH E + GT GY+APE+
Sbjct: 218 ---ANNIVHRDLKPENILLDDNMQIRLSDFGFS--CH-LEPGEKLRELCGTPGYLAPEIL 271
Query: 155 CRNFGEV----SYKSDVYSYGMMVFEM 177
+ E + D+++ G+++F +
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTL 298
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 27/160 (16%)
Query: 30 IKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIAR 88
+K+L+ F +E + LI EF + G+++ + E + PL +Q + +
Sbjct: 97 VKLLD---AFYYENNLWILI-EFCAGGAVDAVMLELERPLTESQ------IQVVCKQTLD 146
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLA----KICHGRESIVSMTGARG 144
L YLH + +I+H D+K NIL D K++DFG++ + R+S + G
Sbjct: 147 ALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI------G 197
Query: 145 TVGYIAPE-VFCRNFGE--VSYKSDVYSYGMMVFEMTGVK 181
T ++APE V C + YK+DV+S G+ + EM ++
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 16/133 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
++ E + GSL++ L+ ++ ++L K+++ + +GL YL +I+H D+
Sbjct: 80 SICMEHMDGGSLDQV------LKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDV 131
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA-RGTVGYIAPEVFCRNFGEVSYKS 165
KP NIL++ K+ DFG++ + I SM + GT Y++PE S +S
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG-----QLIDSMANSFVGTRSYMSPERLQGT--HYSVQS 184
Query: 166 DVYSYGMMVFEMT 178
D++S G+ + EM
Sbjct: 185 DIWSMGLSLVEMA 197
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 16/133 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
++ E + GSL++ L+ ++ ++L K+++ + +GL YL +I+H D+
Sbjct: 99 SICMEHMDGGSLDQV------LKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDV 150
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA-RGTVGYIAPEVFCRNFGEVSYKS 165
KP NIL++ K+ DFG++ + I SM + GT Y++PE S +S
Sbjct: 151 KPSNILVNSRGEIKLCDFGVSG-----QLIDSMANSFVGTRSYMSPERLQGT--HYSVQS 203
Query: 166 DVYSYGMMVFEMT 178
D++S G+ + EM
Sbjct: 204 DIWSMGLSLVEMA 216
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 16/133 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
++ E + GSL++ L+ ++ ++L K+++ + +GL YL +I+H D+
Sbjct: 80 SICMEHMDGGSLDQV------LKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDV 131
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA-RGTVGYIAPEVFCRNFGEVSYKS 165
KP NIL++ K+ DFG++ + I SM + GT Y++PE S +S
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG-----QLIDSMANSFVGTRSYMSPERLQGT--HYSVQS 184
Query: 166 DVYSYGMMVFEMT 178
D++S G+ + EM
Sbjct: 185 DIWSMGLSLVEMA 197
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 16/133 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
++ E + GSL++ L+ ++ ++L K+++ + +GL YL +I+H D+
Sbjct: 80 SICMEHMDGGSLDQV------LKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDV 131
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA-RGTVGYIAPEVFCRNFGEVSYKS 165
KP NIL++ K+ DFG++ + I SM + GT Y++PE S +S
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG-----QLIDSMANSFVGTRSYMSPERLQGT--HYSVQS 184
Query: 166 DVYSYGMMVFEMT 178
D++S G+ + EM
Sbjct: 185 DIWSMGLSLVEMA 197
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP-LETNQKLKWEVLYKI---AVGIARGLEYL 93
G +G +I E ++ G L+ ++ P +E N L L K+ A IA G+ YL
Sbjct: 82 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 141
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARG--TVGYIAP 151
+ + +H D+ N + EDF KI DFG+ + + E+ G +G V +++P
Sbjct: 142 N---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVRWMSP 196
Query: 152 EVFCRNFGEVSYKSDVYSYGMMVFEMT 178
E G + SDV+S+G++++E+
Sbjct: 197 ESL--KDGVFTTYSDVWSFGVVLWEIA 221
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI FGLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 17/165 (10%)
Query: 68 LETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLA 127
L ++KL + + + + +GL Y+H I+H D+KP N+ ++ED KI DFGLA
Sbjct: 119 LMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA 175
Query: 128 KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKN--NAN 185
R++ M G T Y APEV N+ + D++S G ++ EM K +
Sbjct: 176 -----RQADSEMXGXVVTRWYRAPEVIL-NWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229
Query: 186 VAVDRSSEIYF-----PHWVYKRLELEEDLG-LQGIENEEDKEYA 224
+D+ EI P +RL+ +E ++G+ E K++A
Sbjct: 230 DHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFA 274
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 93/233 (39%), Gaps = 35/233 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPL-----------------ETNQKLKWEVLY 80
G C G +I E+ G L F+ K E + L+ L
Sbjct: 102 GACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLL 161
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMT 140
+ +A+G+ +L + +H D+ N+LL KI DFGLA+ + +
Sbjct: 162 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 218
Query: 141 GARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWV 200
AR V ++APE V +SDV+SYG++++E+ + N + +S+ Y
Sbjct: 219 NARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEIFSLGLNPYPGILVNSKFY----- 271
Query: 201 YKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
+L +D G + + + + + C P+ RP ++ L+
Sbjct: 272 ----KLVKD----GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 316
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI D GLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 27/160 (16%)
Query: 30 IKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIAR 88
+K+L+ F +E + LI EF + G+++ + E + PL +Q + +
Sbjct: 97 VKLLD---AFYYENNLWILI-EFCAGGAVDAVMLELERPLTESQ------IQVVCKQTLD 146
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLA----KICHGRESIVSMTGARG 144
L YLH + +I+H D+K NIL D K++DFG++ + R+S + G
Sbjct: 147 ALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI------G 197
Query: 145 TVGYIAPE-VFCRNFGE--VSYKSDVYSYGMMVFEMTGVK 181
T ++APE V C + YK+DV+S G+ + EM ++
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 75 KWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE 134
KW Y V +A L+ +H + +H D+KP N+LLD+ K++DFG + +E
Sbjct: 168 KWARFYTAEVVLA--LDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKE 221
Query: 135 SIVSMTGARGTVGYIAPEVFCRNFGEVSY--KSDVYSYGMMVFEM 177
+V A GT YI+PEV G+ Y + D +S G+ ++EM
Sbjct: 222 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 266
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 75 KWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE 134
KW Y V +A L+ +H + +H D+KP N+LLD+ K++DFG + +E
Sbjct: 173 KWARFYTAEVVLA--LDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKE 226
Query: 135 SIVSMTGARGTVGYIAPEVFCRNFGEVSY--KSDVYSYGMMVFEM 177
+V A GT YI+PEV G+ Y + D +S G+ ++EM
Sbjct: 227 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI DF LA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 75 KWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE 134
KW Y V +A L+ +H + +H D+KP N+LLD+ K++DFG + +E
Sbjct: 173 KWARFYTAEVVLA--LDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKE 226
Query: 135 SIVSMTGARGTVGYIAPEVFCRNFGEVSY--KSDVYSYGMMVFEM 177
+V A GT YI+PEV G+ Y + D +S G+ ++EM
Sbjct: 227 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 18/137 (13%)
Query: 43 GHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRIL 102
G ++ E+++ GSL + E E + + + LE+LH + +++
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQ-------IAAVCRECLQALEFLH---SNQVI 138
Query: 103 HFDIKPHNILLDEDFCPKISDFGL-AKICHGRESIVSMTGARGTVGYIAPEVFCRN-FGE 160
H DIK NILL D K++DFG A+I + +M GT ++APEV R +G
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVTRKAYGP 195
Query: 161 VSYKSDVYSYGMMVFEM 177
K D++S G+M EM
Sbjct: 196 ---KVDIWSLGIMAIEM 209
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI D GLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKF----------IYEKHPLETNQKLKWEVLYKIAVGIA 87
G C +G +++E++ +G L KF + + P + +L + IA IA
Sbjct: 84 GVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIA 143
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
G+ YL + +H D+ N L+ + KI DFG+++ + + +
Sbjct: 144 SGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 200
Query: 148 YIAPE-VFCRNFGEVSYKSDVYSYGMMVFEM 177
++ PE + R F + +SDV+S+G++++E+
Sbjct: 201 WMPPESIMYRKF---TTESDVWSFGVILWEI 228
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 78 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--- 134
V I + IA +E+LH + ++H D+KP NI D K+ DFGL E
Sbjct: 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221
Query: 135 -------SIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
+ + G GT Y++PE N S+K D++S G+++FE+
Sbjct: 222 TVLTPMPAYATHXGQVGTKLYMSPEQIHGN--NYSHKVDIFSLGLILFEL 269
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 78 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE--- 134
V I + IA +E+LH + ++H D+KP NI D K+ DFGL E
Sbjct: 119 VCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 135 -------SIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
+ TG GT Y++PE N S+K D++S G+++FE+
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGN--SYSHKVDIFSLGLILFEL 223
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 51 EFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 110
EF G+LE++I ++ + ++ L E+ +I +G++Y+H + ++++ D+KP N
Sbjct: 100 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT----KGVDYIH---SKKLINRDLKPSN 152
Query: 111 ILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCRNFGEVSYKSDVYS 169
I L + KI DFGL ++ ++GT+ Y++PE + +++G+ + D+Y+
Sbjct: 153 IFLVDTKQVKIGDFGLVTSL---KNDGKRXRSKGTLRYMSPEQISSQDYGK---EVDLYA 206
Query: 170 YGMMVFEMTGVKNNA 184
G+++ E+ V + A
Sbjct: 207 LGLILAELLHVCDTA 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 72 QKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
QKL + + + I RGL+Y+H + I+H D+KP N+ ++ED KI D GLA
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLA---- 172
Query: 132 GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APE+ N+ + D++S G ++ E+
Sbjct: 173 -RHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAEL 216
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L++E V L ++ + P L E + + RGL++LH C I+H D+K
Sbjct: 88 LVFEHVDQ-DLRTYLDKAPP----PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLK 139
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
P NIL+ K++DFGLA+I + ++ + T+ Y APEV ++ + D+
Sbjct: 140 PENILVTSGGTVKLADFGLARIYSYQMALAPVV---VTLWYRAPEVLLQS--TYATPVDM 194
Query: 168 YSYGMMVFEM 177
+S G + EM
Sbjct: 195 WSVGCIFAEM 204
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 16/143 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G F+ ++ E+ GS+ I + N+ L + + I +GLEYLH
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDIIRLR-----NKTLTEDEIATILQSTLKGLEYLH--- 142
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
R +H DIK NILL+ + K++DFG+A + + GT ++APEV
Sbjct: 143 FMRKIHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEV---- 196
Query: 158 FGEVSYK--SDVYSYGMMVFEMT 178
E+ Y +D++S G+ EM
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMA 219
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 28/179 (15%)
Query: 36 TKGFCFEGHRRALIY--EFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYL 93
T FC + L + E+++ G L I H + ++ + A I GL++L
Sbjct: 82 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY------AAEIILGLQFL 135
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR---GTVGYIA 150
H + I++ D+K NILLD+D KI+DFG+ K E+++ GT YIA
Sbjct: 136 H---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK-----ENMLGDAKTNEFCGTPDYIA 187
Query: 151 PEVFCRNFGEVSYKSDVYSYGMMVFEMT-------GVKNNANVAVDRSSEIYFPHWVYK 202
PE+ + ++ D +S+G++++EM G R ++P W+ K
Sbjct: 188 PEILLGQ--KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEK 244
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 28/179 (15%)
Query: 36 TKGFCFEGHRRALIY--EFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYL 93
T FC + L + E+++ G L I H + ++ + A I GL++L
Sbjct: 81 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY------AAEIILGLQFL 134
Query: 94 HRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR---GTVGYIA 150
H + I++ D+K NILLD+D KI+DFG+ K E+++ GT YIA
Sbjct: 135 H---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK-----ENMLGDAKTNXFCGTPDYIA 186
Query: 151 PEVFCRNFGEVSYKSDVYSYGMMVFEMT-------GVKNNANVAVDRSSEIYFPHWVYK 202
PE+ + ++ D +S+G++++EM G R ++P W+ K
Sbjct: 187 PEILLGQ--KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEK 243
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L E+ G L K++ + E LK + + I+ L YLH RI+H D+K
Sbjct: 96 LAMEYCEGGDLRKYLNQ---FENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLK 149
Query: 108 PHNILLD---EDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYK 164
P NI+L + KI D G AK E GT+ Y+APE+ + V+
Sbjct: 150 PENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYLAPELLEQKKYTVTV- 205
Query: 165 SDVYSYGMMVFE-MTGVK 181
D +S+G + FE +TG +
Sbjct: 206 -DYWSFGTLAFECITGFR 222
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L E+ G L K++ + E LK + + I+ L YLH RI+H D+K
Sbjct: 95 LAMEYCEGGDLRKYLNQ---FENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLK 148
Query: 108 PHNILLD---EDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYK 164
P NI+L + KI D G AK E GT+ Y+APE+ + V+
Sbjct: 149 PENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYLAPELLEQKKYTVTV- 204
Query: 165 SDVYSYGMMVFE-MTGVK 181
D +S+G + FE +TG +
Sbjct: 205 -DYWSFGTLAFECITGFR 221
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E+VS G L +I + N +L + ++ I G++Y HR ++H D+K
Sbjct: 93 MVMEYVSGGELFDYICK------NGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLK 143
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
P N+LLD KI+DFGL+ + E + + G+ Y APEV + D+
Sbjct: 144 PENVLLDAHMNAKIADFGLSNMMSDGE---FLRXSCGSPNYAAPEVISGRL-YAGPEVDI 199
Query: 168 YSYGMMVFEM 177
+S G++++ +
Sbjct: 200 WSSGVILYAL 209
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 24/158 (15%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G ++ R I E++ G+L I + + W A IA G+ YLH
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKS-----MDSQYPWSQRVSFAKDIASGMAYLH--- 125
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-------HGRESIVSMTGAR-----GT 145
+ I+H D+ HN L+ E+ ++DFGLA++ G S+ + G
Sbjct: 126 SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 146 VGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGVKN 182
++APE+ R++ E K DV+S+G+++ E+ G N
Sbjct: 186 PYWMAPEMINGRSYDE---KVDVFSFGIVLCEIIGRVN 220
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 190 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 221
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 43 GHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRIL 102
G ++ E+++ GSL + E E + + + LE+LH + +++
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETCMDEGQ-------IAAVCRECLQALEFLH---SNQVI 139
Query: 103 HFDIKPHNILLDEDFCPKISDFGL-AKICHGRESIVSMTGARGTVGYIAPEVFCRN-FGE 160
H DIK NILL D K++DFG A+I + M GT ++APEV R +G
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV---GTPYWMAPEVVTRKAYGP 196
Query: 161 VSYKSDVYSYGMMVFEM 177
K D++S G+M EM
Sbjct: 197 ---KVDIWSLGIMAIEM 210
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 74 LKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGR 133
L E + + RGL++LH C I+H D+KP NIL+ K++DFGLA+I +
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ 165
Query: 134 ESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
++ + T+ Y APEV ++ + D++S G + EM
Sbjct: 166 MALFPVV---VTLWYRAPEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 68 LETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLA 127
+ ++Q L E + + RGL+Y+H + +++H D+KP N+L++E+ KI DFG+A
Sbjct: 150 IHSSQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMA 206
Query: 128 K-ICHG-RESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
+ +C E MT T Y APE+ + E + D++S G + EM
Sbjct: 207 RGLCTSPAEHQYFMTEYVATRWYRAPELML-SLHEYTQAIDLWSVGCIFGEM 257
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 11/140 (7%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C G L+ +++ GSL H + L ++L V IA+G+ YL
Sbjct: 100 GLC-PGSSLQLVTQYLPLGSLLD-----HVRQHRGALGPQLLLNWGVQIAKGMYYLE--- 150
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
++H ++ N+LL +++DFG+A + + + + A+ + ++A E +
Sbjct: 151 EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI--H 208
Query: 158 FGEVSYKSDVYSYGMMVFEM 177
FG+ +++SDV+SYG+ V+E+
Sbjct: 209 FGKYTHQSDVWSYGVTVWEL 228
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 43 GHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRIL 102
G ++ E+++ GSL + E E + + + LE+LH + +++
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQ-------IAAVCRECLQALEFLH---SNQVI 138
Query: 103 HFDIKPHNILLDEDFCPKISDFGL-AKICHGRESIVSMTGARGTVGYIAPEVFCRN-FGE 160
H DIK NILL D K++DFG A+I + M GT ++APEV R +G
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV---GTPYWMAPEVVTRKAYGP 195
Query: 161 VSYKSDVYSYGMMVFEM 177
K D++S G+M EM
Sbjct: 196 ---KVDIWSLGIMAIEM 209
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 68 LETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLA 127
+ ++Q L E + + RGL+Y+H + +++H D+KP N+L++E+ KI DFG+A
Sbjct: 149 IHSSQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMA 205
Query: 128 K-ICHG-RESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKN 182
+ +C E MT T Y APE+ + E + D++S G + EM +
Sbjct: 206 RGLCTSPAEHQYFMTEYVATRWYRAPELML-SLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVS-MTGARG 144
I RGL+Y+H + +LH D+KP N+L++ KI DFGLA+I +T
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 210 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 241
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 43 GHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRIL 102
G ++ E+++ GSL + E E + + + LE+LH + +++
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQ-------IAAVCRECLQALEFLH---SNQVI 138
Query: 103 HFDIKPHNILLDEDFCPKISDFGL-AKICHGRESIVSMTGARGTVGYIAPEVFCRN-FGE 160
H DIK NILL D K++DFG A+I + M GT ++APEV R +G
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV---GTPYWMAPEVVTRKAYGP 195
Query: 161 VSYKSDVYSYGMMVFEM 177
K D++S G+M EM
Sbjct: 196 ---KVDIWSLGIMAIEM 209
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 24/136 (17%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ EF+ G+L + T+ ++ E + + + + + L LH ++H DIK
Sbjct: 225 VVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIK 274
Query: 108 PHNILLDEDFCPKISDFG----LAKICHGRESIVSMTGARGTVGYIAPEVFCR-NFGEVS 162
+ILL D K+SDFG ++K R+ +V GT ++APE+ R +G
Sbjct: 275 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLPYGP-- 326
Query: 163 YKSDVYSYGMMVFEMT 178
+ D++S G+MV EM
Sbjct: 327 -EVDIWSLGIMVIEMV 341
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 190 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 41 FEGHRRALIYEFVSNGSL-EKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNT 99
F+ ++ E + G L +K + K E KL + Y++ + + +YLH
Sbjct: 84 FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAV----QYLH---EN 133
Query: 100 RILHFDIKPHNILL---DEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
I+H D+KP N+LL +ED KI+DFG +KI G S+ M GT Y+APEV
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSL--MRTLCGTPTYLAPEVLV- 189
Query: 157 NFGEVSYKS--DVYSYGMMVF 175
+ G Y D +S G+++F
Sbjct: 190 SVGTAGYNRAVDCWSLGVILF 210
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 190 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 41 FEGHRRALIYEFVSNGSL-EKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNT 99
F+ ++ E + G L +K + K E KL + Y++ + + +YLH
Sbjct: 83 FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAV----QYLH---EN 132
Query: 100 RILHFDIKPHNILL---DEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
I+H D+KP N+LL +ED KI+DFG +KI G S+ M GT Y+APEV
Sbjct: 133 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSL--MRTLCGTPTYLAPEVLV- 188
Query: 157 NFGEVSYKS--DVYSYGMMVF 175
+ G Y D +S G+++F
Sbjct: 189 SVGTAGYNRAVDCWSLGVILF 209
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 11/140 (7%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G C G L+ +++ GSL H + L ++L V IA+G+ YL
Sbjct: 82 GLC-PGSSLQLVTQYLPLGSLLD-----HVRQHRGALGPQLLLNWGVQIAKGMYYLE--- 132
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
++H ++ N+LL +++DFG+A + + + + A+ + ++A E +
Sbjct: 133 EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI--H 190
Query: 158 FGEVSYKSDVYSYGMMVFEM 177
FG+ +++SDV+SYG+ V+E+
Sbjct: 191 FGKYTHQSDVWSYGVTVWEL 210
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 225
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 41 FEGHRRALIYEFVSNGSL-EKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNT 99
F+ ++ E + G L +K + K E KL + Y++ + + +YLH
Sbjct: 84 FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAV----QYLH---EN 133
Query: 100 RILHFDIKPHNILL---DEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
I+H D+KP N+LL +ED KI+DFG +KI G S+ M GT Y+APEV
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSL--MRTLCGTPTYLAPEVLV- 189
Query: 157 NFGEVSYKS--DVYSYGMMVF 175
+ G Y D +S G+++F
Sbjct: 190 SVGTAGYNRAVDCWSLGVILF 210
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 18/136 (13%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRL 204
T Y APE+ + G + D++S G ++ EM S+ FP Y
Sbjct: 210 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEML------------SNRPIFPGKHYLD- 255
Query: 205 ELEEDLGLQGIENEED 220
+L LG+ G ++ED
Sbjct: 256 QLNHILGILGSPSQED 271
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 41 FEGHRRALIYEFVSNGSL-EKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNT 99
F+ ++ E + G L +K + K E KL + Y++ + + +YLH
Sbjct: 84 FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAV----QYLH---EN 133
Query: 100 RILHFDIKPHNILL---DEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
I+H D+KP N+LL +ED KI+DFG +KI G S+ M GT Y+APEV
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSL--MRTLCGTPTYLAPEVLV- 189
Query: 157 NFGEVSYKS--DVYSYGMMVF 175
+ G Y D +S G+++F
Sbjct: 190 SVGTAGYNRAVDCWSLGVILF 210
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 19/156 (12%)
Query: 30 IKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYE-KHPLETNQKLKWEVLYKIAVGIAR 88
+K+L+ F +E + LI EF + G+++ + E + PL +Q + +
Sbjct: 97 VKLLD---AFYYENNLWILI-EFCAGGAVDAVMLELERPLTESQ------IQVVCKQTLD 146
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
L YLH + +I+H D+K NIL D K++DFG++ I GT +
Sbjct: 147 ALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRDXFIGTPYW 201
Query: 149 IAPE-VFCRNFGE--VSYKSDVYSYGMMVFEMTGVK 181
+APE V C + YK+DV+S G+ + EM ++
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+++D+ K++DFGLAK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 41 FEGHRRALIYEFVSNGSL-EKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNT 99
F+ ++ E + G L +K + K E KL + Y++ + + +YLH
Sbjct: 90 FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQMLLAV----QYLH---EN 139
Query: 100 RILHFDIKPHNILL---DEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
I+H D+KP N+LL +ED KI+DFG +KI G S+ M GT Y+APEV
Sbjct: 140 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSL--MRTLCGTPTYLAPEVLV- 195
Query: 157 NFGEVSYKS--DVYSYGMMVF 175
+ G Y D +S G+++F
Sbjct: 196 SVGTAGYNRAVDCWSLGVILF 216
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILL---DEDFCPKISDFGLAKICHGRESIV 137
+I + G+ Y+H+ I+H D+KP NILL ++D KI DFGL+ C + +
Sbjct: 125 RIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNT-- 178
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
M GT YIAPEV + E K DV+S G++++
Sbjct: 179 KMKDRIGTAYYIAPEVLRGTYDE---KCDVWSAGVILY 213
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 40 CFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNT 99
C + R L++EFV + L+ E P L ++V+ K I G+ + H +
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDL--ELFP----NGLDYQVVQKYLFQIINGIGFCH---SH 143
Query: 100 RILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFG 159
I+H DIKP NIL+ + K+ DFG A+ + A T Y APE+ G
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA--TRWYRAPELLV---G 198
Query: 160 EVSYKS--DVYSYGMMVFEM 177
+V Y DV++ G +V EM
Sbjct: 199 DVKYGKAVDVWAIGCLVTEM 218
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L++E V L ++ + P L E + + RGL++LH C I+H D+K
Sbjct: 88 LVFEHVDQ-DLRTYLDKAPP----PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLK 139
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
P NIL+ K++DFGLA+I + +++ T+ Y APEV ++ + D+
Sbjct: 140 PENILVTSGGTVKLADFGLARIYSYQ---MALDPVVVTLWYRAPEVLLQS--TYATPVDM 194
Query: 168 YSYGMMVFEM 177
+S G + EM
Sbjct: 195 WSVGCIFAEM 204
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 11/87 (12%)
Query: 92 YLHRGCNTRILHFDIKPHNILL---DEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
YLHR I+H D+KP N+L DE+ ISDFGL+K+ G+ + M+ A GT GY
Sbjct: 135 YLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM-EGKGDV--MSTACGTPGY 188
Query: 149 IAPEVFCRNFGEVSYKSDVYSYGMMVF 175
+APEV + S D +S G++ +
Sbjct: 189 VAPEVLAQK--PYSKAVDCWSIGVIAY 213
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 39 FCFEGHRR-ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
+ F+ H R + E+ + G L F + + T ++ ++ I LEYLH
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARF-----YGAEIVSALEYLH--- 122
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ +++ DIK N++LD+D KI+DFGL K G +M GT Y+APEV N
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 158 FGEVSYKSDVYSYGMMVFEM 177
+ D + G++++EM
Sbjct: 181 --DYGRAVDWWGLGVVMYEM 198
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 39 FCFEGHRR-ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
+ F+ H R + E+ + G L F + + T ++ ++ I LEYLH
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARF-----YGAEIVSALEYLH--- 122
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ +++ DIK N++LD+D KI+DFGL K G +M GT Y+APEV N
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 158 FGEVSYKSDVYSYGMMVFEM 177
+ D + G++++EM
Sbjct: 181 --DYGRAVDWWGLGVVMYEM 198
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 39 FCFEGHRR-ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
+ F+ H R + E+ + G L F + + T ++ ++ I LEYLH
Sbjct: 77 YAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARF-----YGAEIVSALEYLH--- 127
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ +++ DIK N++LD+D KI+DFGL K G +M GT Y+APEV N
Sbjct: 128 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN 185
Query: 158 FGEVSYKSDVYSYGMMVFEM 177
+ D + G++++EM
Sbjct: 186 --DYGRAVDWWGLGVVMYEM 203
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD---EDFCPKISDFGLAKICHGRESIV 137
+I + G+ Y+H+ +I+H D+KP N+LL+ +D +I DFGL+ H E+
Sbjct: 130 RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS--TH-FEASK 183
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
M GT YIAPEV + E K DV+S G++++
Sbjct: 184 KMKDKIGTAYYIAPEVLHGTYDE---KCDVWSTGVILY 218
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 75 KWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRE 134
KW Y V +A L+ +H + ++H D+KP N+LLD+ K++DFG +
Sbjct: 174 KWAKFYTAEVVLA--LDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDET 227
Query: 135 SIVSMTGARGTVGYIAPEVFCRNFGEVSY--KSDVYSYGMMVFEM 177
+V A GT YI+PEV G+ Y + D +S G+ +FEM
Sbjct: 228 GMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 272
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 11/88 (12%)
Query: 43 GHRR--ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTR 100
GH+ +L+++F+ LE I + + T +K +L + +GLEYLH+
Sbjct: 82 GHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTL-----QGLEYLHQHW--- 132
Query: 101 ILHFDIKPHNILLDEDFCPKISDFGLAK 128
ILH D+KP+N+LLDE+ K++DFGLAK
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 18/136 (13%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRL 204
T Y APE+ + G + D++S G ++ EM S+ FP Y
Sbjct: 192 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEML------------SNRPIFPGKHYLD- 237
Query: 205 ELEEDLGLQGIENEED 220
+L LG+ G ++ED
Sbjct: 238 QLNHILGILGSPSQED 253
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 18/136 (13%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRL 204
T Y APE+ + G + D++S G ++ EM S+ FP Y
Sbjct: 192 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEML------------SNRPIFPGKHYLD- 237
Query: 205 ELEEDLGLQGIENEED 220
+L LG+ G ++ED
Sbjct: 238 QLNHILGILGSPSQED 253
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 39 FCFEGHRR-ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
+ F+ H R + E+ + G L F + + T ++ ++ I LEYLH
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARF-----YGAEIVSALEYLH--- 122
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ +++ DIK N++LD+D KI+DFGL K G +M GT Y+APEV N
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 158 FGEVSYKSDVYSYGMMVFEM 177
+ D + G++++EM
Sbjct: 181 --DYGRAVDWWGLGVVMYEM 198
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 24/136 (17%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ EF+ G+L + T+ ++ E + + + + + L LH ++H DIK
Sbjct: 148 VVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIK 197
Query: 108 PHNILLDEDFCPKISDFG----LAKICHGRESIVSMTGARGTVGYIAPEVFCR-NFGEVS 162
+ILL D K+SDFG ++K R+ +V GT ++APE+ R +G
Sbjct: 198 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLPYGP-- 249
Query: 163 YKSDVYSYGMMVFEMT 178
+ D++S G+MV EM
Sbjct: 250 -EVDIWSLGIMVIEMV 264
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 190 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 221
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR ++
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 188 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 219
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 39 FCFEGHRR-ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
+ F+ H R + E+ + G L F + + T ++ ++ I LEYLH
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARF-----YGAEIVSALEYLH--- 122
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ +++ DIK N++LD+D KI+DFGL K G +M GT Y+APEV N
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 158 FGEVSYKSDVYSYGMMVFEM 177
+ D + G++++EM
Sbjct: 181 --DYGRAVDWWGLGVVMYEM 198
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 192 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 141 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 198 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 229
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 190 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 221
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 18/136 (13%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRL 204
T Y APE+ + G + D++S G ++ EM S+ FP Y
Sbjct: 210 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEML------------SNRPIFPGKHYLD- 255
Query: 205 ELEEDLGLQGIENEED 220
+L LG+ G ++ED
Sbjct: 256 QLNHILGILGSPSQED 271
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 24/136 (17%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ EF+ G+L + T+ ++ E + + + + + L LH ++H DIK
Sbjct: 105 VVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIK 154
Query: 108 PHNILLDEDFCPKISDFG----LAKICHGRESIVSMTGARGTVGYIAPEVFCR-NFGEVS 162
+ILL D K+SDFG ++K R+ +V GT ++APE+ R +G
Sbjct: 155 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLPYGP-- 206
Query: 163 YKSDVYSYGMMVFEMT 178
+ D++S G+MV EM
Sbjct: 207 -EVDIWSLGIMVIEMV 221
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD---EDFCPKISDFGLAKICHGRESIV 137
+I + G+ Y+H+ +I+H D+KP N+LL+ +D +I DFGL+ H E+
Sbjct: 153 RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS--TH-FEASK 206
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
M GT YIAPEV + E K DV+S G++++
Sbjct: 207 KMKDKIGTAYYIAPEVLHGTYDE---KCDVWSTGVILY 241
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 39 FCFEGHRR-ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
+ F+ H R + E+ + G L F + + T ++ ++ I LEYLH
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARF-----YGAEIVSALEYLH--- 122
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ +++ DIK N++LD+D KI+DFGL K G +M GT Y+APEV N
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 158 FGEVSYKSDVYSYGMMVFEM 177
+ D + G++++EM
Sbjct: 181 --DYGRAVDWWGLGVVMYEM 198
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 195 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 226
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 139 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 196 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 227
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 130 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 187 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 218
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 188 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 219
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 39 FCFEGHRR-ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
+ F+ H R + E+ + G L F + + T ++ ++ I LEYLH
Sbjct: 75 YAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARF-----YGAEIVSALEYLH--- 125
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ +++ DIK N++LD+D KI+DFGL K G +M GT Y+APEV N
Sbjct: 126 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDN 183
Query: 158 FGEVSYKSDVYSYGMMVFEM 177
+ D + G++++EM
Sbjct: 184 --DYGRAVDWWGLGVVMYEM 201
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 24/136 (17%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ EF+ G+L + T+ ++ E + + + + + L LH ++H DIK
Sbjct: 103 VVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIK 152
Query: 108 PHNILLDEDFCPKISDFG----LAKICHGRESIVSMTGARGTVGYIAPEVFCR-NFGEVS 162
+ILL D K+SDFG ++K R+ +V GT ++APE+ R +G
Sbjct: 153 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLPYGP-- 204
Query: 163 YKSDVYSYGMMVFEMT 178
+ D++S G+MV EM
Sbjct: 205 -EVDIWSLGIMVIEMV 219
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 14/131 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ GS + + PLE + I I +GL+YLH + R +H DIK
Sbjct: 94 IIMEYLGGGSALDLL-KPGPLEET------YIATILREILKGLDYLH---SERKIHRDIK 143
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
N+LL E K++DFG+A ++ + GT ++APEV ++ +K+D+
Sbjct: 144 AANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQS--AYDFKADI 199
Query: 168 YSYGMMVFEMT 178
+S G+ E+
Sbjct: 200 WSLGITAIELA 210
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 18/131 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L+ EF G L + I +H + I I G+ YLH+ I+H DIK
Sbjct: 123 LVTEFYEGGELFEQIINRHKFDECDAAN------IMKQILSGICYLHK---HNIVHRDIK 173
Query: 108 PHNILLDED---FCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYK 164
P NILL+ KI DFGL+ + GT YIAPEV + + E K
Sbjct: 174 PENILLENKNSLLNIKIVDFGLSSFFSKD---YKLRDRLGTAYYIAPEVLKKKYNE---K 227
Query: 165 SDVYSYGMMVF 175
DV+S G++++
Sbjct: 228 CDVWSCGVIMY 238
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +T
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APE+ + G + D++S G ++ EM
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEM 225
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD---EDFCPKISDFGLAKICHGRESIV 137
+I + G+ Y+H+ +I+H D+KP N+LL+ +D +I DFGL+ H E+
Sbjct: 154 RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS--TH-FEASK 207
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
M GT YIAPEV + E K DV+S G++++
Sbjct: 208 KMKDKIGTAYYIAPEVLHGTYDE---KCDVWSTGVILY 242
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 41 FEGHRRALIYEFVSNGSL-EKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNT 99
F+ ++ E + G L +K + K E KL Y++ + + +YLH
Sbjct: 223 FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFYQMLLAV----QYLHEN--- 272
Query: 100 RILHFDIKPHNILL---DEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
I+H D+KP N+LL +ED KI+DFG +KI G S+ M GT Y+APEV
Sbjct: 273 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSL--MRTLCGTPTYLAPEVLV- 328
Query: 157 NFGEVSYKS--DVYSYGMMVF 175
+ G Y D +S G+++F
Sbjct: 329 SVGTAGYNRAVDCWSLGVILF 349
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ K++DFG AK GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---- 200
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 41 FEGHRRALIYEFVSNGSL-EKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNT 99
F+ ++ E + G L +K + K E KL Y++ + + +YLH
Sbjct: 209 FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFYQMLLAV----QYLHEN--- 258
Query: 100 RILHFDIKPHNILL---DEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
I+H D+KP N+LL +ED KI+DFG +KI G S+ M GT Y+APEV
Sbjct: 259 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSL--MRTLCGTPTYLAPEVLV- 314
Query: 157 NFGEVSYKS--DVYSYGMMVF 175
+ G Y D +S G+++F
Sbjct: 315 SVGTAGYNRAVDCWSLGVILF 335
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ K++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ K++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+DE +++DFG AK GR +
Sbjct: 134 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC---- 186
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 187 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 220
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 14/131 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ GS + E PL+ Q + I I +GL+YLH + + +H DIK
Sbjct: 97 IIMEYLGGGSALDLL-EPGPLDETQ------IATILREILKGLDYLH---SEKKIHRDIK 146
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
N+LL E K++DFG+A ++ + GT ++APEV ++ K+D+
Sbjct: 147 AANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQS--AYDSKADI 202
Query: 168 YSYGMMVFEMT 178
+S G+ E+
Sbjct: 203 WSLGITAIELA 213
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ K++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 22/154 (14%)
Query: 28 VAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIA 87
+ +K ET F F L+++ + G L ++ EK L + KI +
Sbjct: 87 IQLKDTYETNTFFF------LVFDLMKKGELFDYLTEKVTLSEKET------RKIMRALL 134
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
+ LH+ I+H D+KP NILLD+D K++DFG + E + S+ GT
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC---GTPS 188
Query: 148 YIAPEVF-CR---NFGEVSYKSDVYSYGMMVFEM 177
Y+APE+ C N + D++S G++++ +
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 222
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 18/137 (13%)
Query: 43 GHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRIL 102
G ++ E+++ GSL + E E + + + LE+LH + +++
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETCMDEGQ-------IAAVCRECLQALEFLH---SNQVI 139
Query: 103 HFDIKPHNILLDEDFCPKISDFGL-AKICHGRESIVSMTGARGTVGYIAPEVFCRN-FGE 160
H +IK NILL D K++DFG A+I + +M GT ++APEV R +G
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVTRKAYGP 196
Query: 161 VSYKSDVYSYGMMVFEM 177
K D++S G+M EM
Sbjct: 197 ---KVDIWSLGIMAIEM 210
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
++ E + GSL++ L+ ++ ++L K+++ + +GL YL +I+H D+
Sbjct: 83 SICMEHMDGGSLDQV------LKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDV 134
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA-RGTVGYIAPEVFCRNFGEVSYKS 165
KP NIL++ K+ DFG++ + I M GT Y++PE S +S
Sbjct: 135 KPSNILVNSRGEIKLCDFGVSG-----QLIDEMANEFVGTRSYMSPERLQGT--HYSVQS 187
Query: 166 DVYSYGMMVFEMT 178
D++S G+ + EM
Sbjct: 188 DIWSMGLSLVEMA 200
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 24/136 (17%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ EF+ G+L + T+ ++ E + + + + + L LH ++H DIK
Sbjct: 94 VVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIK 143
Query: 108 PHNILLDEDFCPKISDFG----LAKICHGRESIVSMTGARGTVGYIAPEVFCR-NFGEVS 162
+ILL D K+SDFG ++K R+ +V GT ++APE+ R +G
Sbjct: 144 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLPYGP-- 195
Query: 163 YKSDVYSYGMMVFEMT 178
+ D++S G+MV EM
Sbjct: 196 -EVDIWSLGIMVIEMV 210
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 14/131 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ GS + E PL+ Q + I I +GL+YLH + + +H DIK
Sbjct: 82 IIMEYLGGGSALDLL-EPGPLDETQ------IATILREILKGLDYLH---SEKKIHRDIK 131
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
N+LL E K++DFG+A ++ + GT ++APEV ++ K+D+
Sbjct: 132 AANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQS--AYDSKADI 187
Query: 168 YSYGMMVFEMT 178
+S G+ E+
Sbjct: 188 WSLGITAIELA 198
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G + + ++ EF G+++ + LE ++ L + + + L +LH
Sbjct: 83 GAYYHDGKLWIMIEFCPGGAVDAIM-----LELDRGLTEPQIQVVCRQMLEALNFLH--- 134
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLA----KICHGRESIVSMTGARGTVGYIAPE- 152
+ RI+H D+K N+L+ + +++DFG++ K R+S + GT ++APE
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEV 188
Query: 153 VFCRNFGEV--SYKSDVYSYGMMVFEMTGVK 181
V C + YK+D++S G+ + EM ++
Sbjct: 189 VMCETMKDTPYDYKADIWSLGITLIEMAQIE 219
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD---EDFCPKISDFGLAKICHGRESIV 137
+I + G+ Y+H+ +I+H D+KP N+LL+ +D +I DFGL+ H E+
Sbjct: 136 RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS--TH-FEASK 189
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
M GT YIAPEV + E K DV+S G++++
Sbjct: 190 KMKDKIGTAYYIAPEVLHGTYDE---KCDVWSTGVILY 224
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILL---DEDFCPKISDFGLAKICHGRESIV 137
+I + G+ Y+H+ I+H D+KP NILL ++D KI DFGL+ C + +
Sbjct: 125 RIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNT-- 178
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
M GT YIAPEV + E K DV+S G++++
Sbjct: 179 KMKDRIGTAYYIAPEVLRGTYDE---KCDVWSAGVILY 213
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 24/136 (17%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ EF+ G+L + T+ ++ E + + + + + L LH ++H DIK
Sbjct: 98 VVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIK 147
Query: 108 PHNILLDEDFCPKISDFG----LAKICHGRESIVSMTGARGTVGYIAPEVFCR-NFGEVS 162
+ILL D K+SDFG ++K R+ +V GT ++APE+ R +G
Sbjct: 148 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLPYGP-- 199
Query: 163 YKSDVYSYGMMVFEMT 178
+ D++S G+MV EM
Sbjct: 200 -EVDIWSLGIMVIEMV 214
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 14/131 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ GS + E PL+ Q + I I +GL+YLH + + +H DIK
Sbjct: 82 IIMEYLGGGSALDLL-EPGPLDETQ------IATILREILKGLDYLH---SEKKIHRDIK 131
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
N+LL E K++DFG+A ++ + GT ++APEV ++ K+D+
Sbjct: 132 AANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQS--AYDSKADI 187
Query: 168 YSYGMMVFEMT 178
+S G+ E+
Sbjct: 188 WSLGITAIELA 198
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 73 KLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHG 132
K E + + + +GL+Y+H ++H D+KP N+ ++ED KI DFGLA
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLA----- 173
Query: 133 RESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
R + MTG T Y APEV ++ + D++S G ++ EM
Sbjct: 174 RHADAEMTGYVVTRWYRAPEVIL-SWMHYNQTVDIWSVGCIMAEM 217
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILL---DEDFCPKISDFGLAKICHGRESIV 137
+I + G+ Y+H+ I+H D+KP NILL ++D KI DFGL+ C + +
Sbjct: 125 RIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNT-- 178
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
M GT YIAPEV + E K DV+S G++++
Sbjct: 179 KMKDRIGTAYYIAPEVLRGTYDE---KCDVWSAGVILY 213
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G + + ++ EF G+++ + LE ++ L + + + L +LH
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAVDAIM-----LELDRGLTEPQIQVVCRQMLEALNFLH--- 126
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLA----KICHGRESIVSMTGARGTVGYIAPE- 152
+ RI+H D+K N+L+ + +++DFG++ K R+S + GT ++APE
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEV 180
Query: 153 VFCRNFGEV--SYKSDVYSYGMMVFEMTGVK 181
V C + YK+D++S G+ + EM ++
Sbjct: 181 VMCETMKDTPYDYKADIWSLGITLIEMAQIE 211
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 19/144 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E + G L F+ + + + L +LY A ++ L YL + R +H DI
Sbjct: 87 IIMELCTLGELRSFLQVR---KFSLDLASLILY--AYQLSTALAYLE---SKRFVHRDIA 138
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
N+L+ + C K+ DFGL++ + G + + ++APE NF + SDV
Sbjct: 139 ARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG-KLPIKWMAPESI--NFRRFTSASDV 195
Query: 168 YSYGMMVFEM--------TGVKNN 183
+ +G+ ++E+ GVKNN
Sbjct: 196 WMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL+Y+H + ++H D+KP N+ ++ED KI DFGLA R + MTG T
Sbjct: 153 MLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLA-----RHADAEMTGYVVT 204
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
Y APEV ++ + D++S G ++ EM
Sbjct: 205 RWYRAPEVIL-SWMHYNQTVDIWSVGCIMAEM 235
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 14/131 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E++ GS + E PL+ Q + I I +GL+YLH + + +H DIK
Sbjct: 102 IIMEYLGGGSALDLL-EPGPLDETQ------IATILREILKGLDYLH---SEKKIHRDIK 151
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
N+LL E K++DFG+A ++ + GT ++APEV ++ K+D+
Sbjct: 152 AANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQS--AYDSKADI 207
Query: 168 YSYGMMVFEMT 178
+S G+ E+
Sbjct: 208 WSLGITAIELA 218
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 48 LIYEFVSNGSLEKFI-YEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+I E + G L F+ K+ L+ L +LY A ++ L YL + R +H DI
Sbjct: 89 IIMELCTLGELRSFLQVRKYSLD----LASLILY--AYQLSTALAYLE---SKRFVHRDI 139
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
N+L+ + C K+ DFGL++ + + + + ++APE NF + SD
Sbjct: 140 AARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASD 196
Query: 167 VYSYGMMVFEM--------TGVKNN 183
V+ +G+ ++E+ GVKNN
Sbjct: 197 VWMFGVCMWEILMHGVKPFQGVKNN 221
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I L+YLH N +++ D+K N++LD+D KI+DFGL K G + +M GT
Sbjct: 257 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 312
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
Y+APEV N + D + G++++EM
Sbjct: 313 PEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 342
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I L+YLH N +++ D+K N++LD+D KI+DFGL K G + +M GT
Sbjct: 260 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 315
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
Y+APEV N + D + G++++EM
Sbjct: 316 PEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 345
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+++D+ +++DFGLAK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 15/95 (15%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP----KISDFGLA-KICHGRESIVSMT 140
I G+ YLH+ I+H D+KP NILL + P KI DFG++ KI H E +
Sbjct: 140 ILEGVYYLHQN---NIVHLDLKPQNILLSSIY-PLGDIKIVDFGMSRKIGHACE----LR 191
Query: 141 GARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
GT Y+APE+ N+ ++ +D+++ G++ +
Sbjct: 192 EIMGTPEYLAPEIL--NYDPITTATDMWNIGIIAY 224
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 48 LIYEFVSNGSLEKFI-YEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+I E + G L F+ K+ L+ L +LY A ++ L YL + R +H DI
Sbjct: 87 IIMELCTLGELRSFLQVRKYSLD----LASLILY--AYQLSTALAYLE---SKRFVHRDI 137
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
N+L+ + C K+ DFGL++ + + + + ++APE NF + SD
Sbjct: 138 AARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASD 194
Query: 167 VYSYGMMVFEM--------TGVKNN 183
V+ +G+ ++E+ GVKNN
Sbjct: 195 VWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 48 LIYEFVSNGSLEKFI-YEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+I E + G L F+ K+ L+ L +LY A ++ L YL + R +H DI
Sbjct: 90 IIMELCTLGELRSFLQVRKYSLD----LASLILY--AYQLSTALAYLE---SKRFVHRDI 140
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
N+L+ + C K+ DFGL++ + + + + ++APE NF + SD
Sbjct: 141 AARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASD 197
Query: 167 VYSYGMMVFEM--------TGVKNN 183
V+ +G+ ++E+ GVKNN
Sbjct: 198 VWMFGVCMWEILMHGVKPFQGVKNN 222
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I +EY HR +I+H D+KP N+LLDE KI+DFGL+ I + + + G+
Sbjct: 122 IISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGS 175
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
Y APEV + DV+S G++++ M
Sbjct: 176 PNYAAPEVISGKL-YAGPEVDVWSCGVILYVM 206
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+++D+ K++DFG AK GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---- 200
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 48 LIYEFVSNGSLEKFIYEK-HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+ E V GSL + K PL+ N+ + + I GL+YLH + +I+H DI
Sbjct: 96 IFMEQVPGGSLSALLRSKWGPLKDNE----QTIGFYTKQILEGLKYLH---DNQIVHRDI 148
Query: 107 KPHNILLDE-DFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
K N+L++ KISDFG +K G GT+ Y+APE+ + +
Sbjct: 149 KGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF--TGTLQYMAPEIIDKGPRGYGKAA 206
Query: 166 DVYSYGMMVFEMT 178
D++S G + EM
Sbjct: 207 DIWSLGCTIIEMA 219
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+++D+ K++DFG AK GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---- 200
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 48 LIYEFVSNGSLEKFI-YEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+I E + G L F+ K+ L+ L +LY A ++ L YL + R +H DI
Sbjct: 84 IIMELCTLGELRSFLQVRKYSLD----LASLILY--AYQLSTALAYLE---SKRFVHRDI 134
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
N+L+ + C K+ DFGL++ + + + + ++APE NF + SD
Sbjct: 135 AARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASD 191
Query: 167 VYSYGMMVFEM--------TGVKNN 183
V+ +G+ ++E+ GVKNN
Sbjct: 192 VWMFGVCMWEILMHGVKPFQGVKNN 216
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+++D+ K++DFG AK GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---- 200
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 48 LIYEFVSNGSLEKFI-YEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+I E + G L F+ K+ L+ L +LY A ++ L YL + R +H DI
Sbjct: 92 IIMELCTLGELRSFLQVRKYSLD----LASLILY--AYQLSTALAYLE---SKRFVHRDI 142
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
N+L+ + C K+ DFGL++ + + + + ++APE NF + SD
Sbjct: 143 AARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASD 199
Query: 167 VYSYGMMVFEM--------TGVKNN 183
V+ +G+ ++E+ GVKNN
Sbjct: 200 VWMFGVCMWEILMHGVKPFQGVKNN 224
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 48 LIYEFVSNGSLEKFI-YEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+I E + G L F+ K+ L+ L +LY A ++ L YL + R +H DI
Sbjct: 115 IIMELCTLGELRSFLQVRKYSLD----LASLILY--AYQLSTALAYLE---SKRFVHRDI 165
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
N+L+ + C K+ DFGL++ + + + + ++APE NF + SD
Sbjct: 166 AARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASD 222
Query: 167 VYSYGMMVFEM--------TGVKNN 183
V+ +G+ ++E+ GVKNN
Sbjct: 223 VWMFGVCMWEILMHGVKPFQGVKNN 247
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 48 LIYEFVSNGSLEKFI-YEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+I E + G L F+ K+ L+ L +LY A ++ L YL + R +H DI
Sbjct: 87 IIMELCTLGELRSFLQVRKYSLD----LASLILY--AYQLSTALAYLE---SKRFVHRDI 137
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
N+L+ + C K+ DFGL++ + + + + ++APE NF + SD
Sbjct: 138 AARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASD 194
Query: 167 VYSYGMMVFEM--------TGVKNN 183
V+ +G+ ++E+ GVKNN
Sbjct: 195 VWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+++D+ K++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+++D+ K++DFG AK GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---- 200
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 19/145 (13%)
Query: 44 HRRALIYEFVSNGSLEKFI---YEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTR 100
H L+ F G+L I +K T ++ W +L GI RGLE +H
Sbjct: 103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLL-----GICRGLEAIHAKGYA- 156
Query: 101 ILHFDIKPHNILLDEDFCPKISDFG-LAKIC-HGRESIVSMT-----GARGTVGYIAPEV 153
H D+KP NILL ++ P + D G + + C H S ++T R T+ Y APE+
Sbjct: 157 --HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPEL 214
Query: 154 F-CRNFGEVSYKSDVYSYGMMVFEM 177
F ++ + ++DV+S G +++ M
Sbjct: 215 FSVQSHCVIDERTDVWSLGCVLYAM 239
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I +EY HR +I+H D+KP N+LLDE KI+DFGL+ I + + G+
Sbjct: 121 IISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGS 174
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
Y APEV + DV+S G++++ M
Sbjct: 175 PNYAAPEVISGKL-YAGPEVDVWSCGVILYVM 205
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+++D+ K++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I +EY HR +I+H D+KP N+LLDE KI+DFGL+ I + + G+
Sbjct: 112 IISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGS 165
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
Y APEV + DV+S G++++ M
Sbjct: 166 PNYAAPEVISGKL-YAGPEVDVWSCGVILYVM 196
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC---- 200
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 40 CFEG-HRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCN 98
CF+ R + E+V+ G L I + + Q + + A I+ GL +LH+
Sbjct: 88 CFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY------AAEISIGLFFLHK--- 138
Query: 99 TRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR---GTVGYIAPEVFC 155
I++ D+K N++LD + KI+DFG+ K E ++ R GT YIAPE+
Sbjct: 139 RGIIYRDLKLDNVMLDSEGHIKIADFGMCK-----EHMMDGVTTREFCGTPDYIAPEIIA 193
Query: 156 RNFGEVSYKSDVYSYGMMVFEM 177
+ D ++YG++++EM
Sbjct: 194 --YQPYGKSVDWWAYGVLLYEM 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I +EY HR +I+H D+KP N+LLDE KI+DFGL+ I + + G+
Sbjct: 116 IISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGS 169
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
Y APEV + DV+S G++++ M
Sbjct: 170 PNYAAPEVISGKL-YAGPEVDVWSCGVILYVM 200
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 194
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 195 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 228
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 200
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 200
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 192
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 193 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 226
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 192
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 193 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 226
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 133 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC---- 185
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 186 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 219
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 200
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 220
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 221 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 254
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 200
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 200
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 234
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 17/131 (12%)
Query: 48 LIYEFVSNGSL-EKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
L+ E+V G L ++ I E + L +L + K I G+ ++H+ ILH D+
Sbjct: 163 LVMEYVDGGELFDRIIDESYNL---TELDTILFMK---QICEGIRHMHQ---MYILHLDL 213
Query: 107 KPHNIL-LDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYK 164
KP NIL ++ D KI DFGLA+ RE + GT ++APEV +F VS+
Sbjct: 214 KPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKVNFGTPEFLAPEVVNYDF--VSFP 268
Query: 165 SDVYSYGMMVF 175
+D++S G++ +
Sbjct: 269 TDMWSVGVIAY 279
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 200
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 201 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 48 LIYEFVSNGSLEKFIYEK-HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+ E V GSL + K PL+ N+ + + I GL+YLH + +I+H DI
Sbjct: 82 IFMEQVPGGSLSALLRSKWGPLKDNE----QTIGFYTKQILEGLKYLH---DNQIVHRDI 134
Query: 107 KPHNILLDE-DFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
K N+L++ KISDFG +K G GT+ Y+APE+ + +
Sbjct: 135 KGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF--TGTLQYMAPEIIDKGPRGYGKAA 192
Query: 166 DVYSYGMMVFEMT 178
D++S G + EM
Sbjct: 193 DIWSLGCTIIEMA 205
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 18/136 (13%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRL 204
T Y APE+ + G + D++S G ++ EM S+ FP Y
Sbjct: 194 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEML------------SNRPIFPGKHYLD- 239
Query: 205 ELEEDLGLQGIENEED 220
+L LG+ G ++ED
Sbjct: 240 QLNHILGILGSPSQED 255
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 18/136 (13%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH-GRESIVSMTGARG 144
I RGL+Y+H + +LH D+KP N+LL+ KI DFGLA++ + +
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 145 TVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRL 204
T Y APE+ + G + D++S G ++ EM S+ FP Y
Sbjct: 195 TRWYRAPEIMLNSKG-YTKSIDIWSVGCILAEML------------SNRPIFPGKHYLD- 240
Query: 205 ELEEDLGLQGIENEED 220
+L LG+ G ++ED
Sbjct: 241 QLNHILGILGSPSQED 256
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 29/154 (18%)
Query: 48 LIYEFVSNGSLEKFIYEK-HPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
L+ E NG + +++ + P N+ + +++I G+ YLH + ILH D+
Sbjct: 88 LVLEMCHNGEMNRYLKNRVKPFSENEARHF--MHQIITGML----YLH---SHGILHRDL 138
Query: 107 KPHNILLDEDFCPKISDFGLA---KICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSY 163
N+LL + KI+DFGLA K+ H + + GT YI+PE+ R+ +
Sbjct: 139 TLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC-----GTPNYISPEIATRSAHGL-- 191
Query: 164 KSDVYSYGMMV---------FEMTGVKNNANVAV 188
+SDV+S G M F+ VKN N V
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 220
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 221 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 254
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 44 HRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILH 103
++ L++EF+ N L+K++ + T + L+ ++ + +GL + H +ILH
Sbjct: 76 NKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILH 131
Query: 104 FDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSY 163
D+KP N+L+++ K+ DFGLA+ + + + T+ Y AP+V G +Y
Sbjct: 132 RDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFSSEVVTLWYRAPDVL---MGSRTY 186
Query: 164 KS--DVYSYGMMVFEM 177
+ D++S G ++ EM
Sbjct: 187 STSIDIWSCGCILAEM 202
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I L+YLH N +++ D+K N++LD+D KI+DFGL K G + +M GT
Sbjct: 118 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 173
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
Y+APEV N + D + G++++EM
Sbjct: 174 PEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 203
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 40 CFEGHRRAL-IYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH-RGC 97
CF+ R + E+V+ G L ++ +KL E + I+ L YLH RG
Sbjct: 89 CFQTESRLFFVIEYVNGGDL------MFHMQRQRKLPEEHARFYSAEISLALNYLHERG- 141
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
I++ D+K N+LLD + K++D+G+ K G + + GT YIAPE+
Sbjct: 142 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGE 196
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKNNANVA 187
++G + D ++ G+++FEM ++ ++
Sbjct: 197 DYG---FSVDWWALGVLMFEMMAGRSPFDIV 224
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I L+YLH N +++ D+K N++LD+D KI+DFGL K G + +M GT
Sbjct: 117 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 172
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
Y+APEV N + D + G++++EM
Sbjct: 173 PEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 202
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 89/221 (40%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G + K L+ K + +A L Y H
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYK------ELQKLSKFDEQRTATYITELANALSYCH--- 130
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+ R
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTTLCGTLDYLPPEMIEGR 186
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 187 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 234
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 235 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 261
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I L+YLH N +++ D+K N++LD+D KI+DFGL K G + +M GT
Sbjct: 119 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 174
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
Y+APEV N + D + G++++EM
Sbjct: 175 PEYLAPEVLEDN--DYGRAVDWWGLGVVMYEM 204
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
L++EF+ L+K + E + ++K LY++ G+A ++ RILH D+
Sbjct: 95 TLVFEFMEK-DLKKVLDENKTGLQDSQIKI-YLYQLLRGVAHCHQH-------RILHRDL 145
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS- 165
KP N+L++ D K++DFGLA+ + S T T+ Y AP+V G Y +
Sbjct: 146 KPQNLLINSDGALKLADFGLARAFG--IPVRSYTHEVVTLWYRAPDVL---MGSKKYSTS 200
Query: 166 -DVYSYGMMVFEM 177
D++S G + EM
Sbjct: 201 VDIWSIGCIFAEM 213
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
L++EF+ L+K + E + ++K LY++ G+A ++ RILH D+
Sbjct: 95 TLVFEFMEK-DLKKVLDENKTGLQDSQIKI-YLYQLLRGVAHCHQH-------RILHRDL 145
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS- 165
KP N+L++ D K++DFGLA+ + S T T+ Y AP+V G Y +
Sbjct: 146 KPQNLLINSDGALKLADFGLARAFG--IPVRSYTHEVVTLWYRAPDVL---MGSKKYSTS 200
Query: 166 -DVYSYGMMVFEM 177
D++S G + EM
Sbjct: 201 VDIWSIGCIFAEM 213
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLD---EDFCPKISDFGLAKICHGRESIVSMTGA 142
+ G YLH+ I+H D+KP N+LL+ D KI DFGL+ H E M
Sbjct: 113 VLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLS--AH-FEVGGKMKER 166
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
GT YIAPEV + + E K DV+S G++++
Sbjct: 167 LGTAYYIAPEVLRKKYDE---KCDVWSCGVILY 196
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 91/226 (40%), Gaps = 30/226 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP----LETNQK-----LKWEVLYKIAVGIAR 88
G C EG +++E++ +G L +F+ P L + L L +A +A
Sbjct: 110 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA 169
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+ YL +H D+ N L+ + KI DFG+++ + + + +
Sbjct: 170 GMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 226
Query: 149 IAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELE 207
+ PE + R F + +SDV+S+G++++E+ + + I
Sbjct: 227 MPPESILYRKF---TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI------------- 270
Query: 208 EDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLE 253
D QG E E + ++ + C Q P R ++ V L+
Sbjct: 271 -DCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 40 CFEGHRRAL-IYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH-RGC 97
CF+ R + E+V+ G L ++ +KL E + I+ L YLH RG
Sbjct: 121 CFQTESRLFFVIEYVNGGDL------MFHMQRQRKLPEEHARFYSAEISLALNYLHERG- 173
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
I++ D+K N+LLD + K++D+G+ K G + + GT YIAPE+
Sbjct: 174 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGE 228
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKNNANVA 187
++G + D ++ G+++FEM ++ ++
Sbjct: 229 DYG---FSVDWWALGVLMFEMMAGRSPFDIV 256
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 91/227 (40%), Gaps = 30/227 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP----LETNQK-----LKWEVLYKIAVGIAR 88
G C EG +++E++ +G L +F+ P L + L L +A +A
Sbjct: 81 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA 140
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+ YL +H D+ N L+ + KI DFG+++ + + + +
Sbjct: 141 GMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 197
Query: 149 IAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELE 207
+ PE + R F + +SDV+S+G++++E+ + + I
Sbjct: 198 MPPESILYRKF---TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI------------- 241
Query: 208 EDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEG 254
D QG E E + ++ + C Q P R ++ V L+
Sbjct: 242 -DCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQA 287
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 22/154 (14%)
Query: 28 VAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIA 87
+ +K ET F F L+++ + G L ++ EK L + KI +
Sbjct: 87 IQLKDTYETNTFFF------LVFDLMKKGELFDYLTEKVTLSEKET------RKIMRALL 134
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
+ LH+ I+H D+KP NILLD+D K++DFG + E + + GT
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC---GTPS 188
Query: 148 YIAPEVF-CR---NFGEVSYKSDVYSYGMMVFEM 177
Y+APE+ C N + D++S G++++ +
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 222
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 40 CFEGHRRAL-IYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH-RGC 97
CF+ R + E+V+ G L ++ +KL E + I+ L YLH RG
Sbjct: 74 CFQTESRLFFVIEYVNGGDL------MFHMQRQRKLPEEHARFYSAEISLALNYLHERG- 126
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
I++ D+K N+LLD + K++D+G+ K G + + GT YIAPE+
Sbjct: 127 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGE 181
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKNNANVA 187
++G + D ++ G+++FEM ++ ++
Sbjct: 182 DYG---FSVDWWALGVLMFEMMAGRSPFDIV 209
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 22/154 (14%)
Query: 28 VAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIA 87
+ +K ET F F L+++ + G L ++ EK L + KI +
Sbjct: 74 IQLKDTYETNTFFF------LVFDLMKKGELFDYLTEKVTLSEKET------RKIMRALL 121
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG 147
+ LH+ I+H D+KP NILLD+D K++DFG + E + + GT
Sbjct: 122 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC---GTPS 175
Query: 148 YIAPEVF-CR---NFGEVSYKSDVYSYGMMVFEM 177
Y+APE+ C N + D++S G++++ +
Sbjct: 176 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 209
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 91/227 (40%), Gaps = 30/227 (13%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP----LETNQK-----LKWEVLYKIAVGIAR 88
G C EG +++E++ +G L +F+ P L + L L +A +A
Sbjct: 87 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA 146
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+ YL +H D+ N L+ + KI DFG+++ + + + +
Sbjct: 147 GMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 203
Query: 149 IAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELE 207
+ PE + R F + +SDV+S+G++++E+ + + I
Sbjct: 204 MPPESILYRKF---TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI------------- 247
Query: 208 EDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVEMLEG 254
D QG E E + ++ + C Q P R ++ V L+
Sbjct: 248 -DCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQA 293
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 40 CFEGHRRAL-IYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH-RGC 97
CF+ R + E+V+ G L ++ +KL E + I+ L YLH RG
Sbjct: 78 CFQTESRLFFVIEYVNGGDL------MFHMQRQRKLPEEHARFYSAEISLALNYLHERG- 130
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
I++ D+K N+LLD + K++D+G+ K G + + GT YIAPE+
Sbjct: 131 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGE 185
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKNNANVA 187
++G + D ++ G+++FEM ++ ++
Sbjct: 186 DYG---FSVDWWALGVLMFEMMAGRSPFDIV 213
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+++D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 233
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNIL-LDEDFCP---KISDFGLAKICHGRESIVSMTG 141
I + +EYLH ++H D+KP NIL +DE P +I DFG AK ++ MT
Sbjct: 125 ITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL-MTP 180
Query: 142 ARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM-TGVKNNANVAVDRSSEI 194
T ++APEV R + + D++S G++++ M TG AN D EI
Sbjct: 181 CY-TANFVAPEVLERQGYDAA--CDIWSLGVLLYTMLTGYTPFANGPDDTPEEI 231
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 19/144 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E + G L F+ + + + L +LY A ++ L YL + R +H DI
Sbjct: 467 IIMELCTLGELRSFLQVR---KFSLDLASLILY--AYQLSTALAYLE---SKRFVHRDIA 518
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
N+L+ + C K+ DFGL++ + + + + ++APE NF + SDV
Sbjct: 519 ARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASDV 575
Query: 168 YSYGMMVFEM--------TGVKNN 183
+ +G+ ++E+ GVKNN
Sbjct: 576 WMFGVCMWEILMHGVKPFQGVKNN 599
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+++D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 200 -GTPEYLAPEIIISK--GYNKAVDWWALGVLIYEMAA 233
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE + + + + D ++ G+++++M
Sbjct: 200 -GTPEYLAPEIILSKGYNKA---VDWWALGVLIYQMAA 233
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLD---EDFCPKISDFGLAKICHGRESIVSMTGA 142
+ G YLH+ I+H D+KP N+LL+ D KI DFGL+ H E M
Sbjct: 130 VLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLS--AH-FEVGGKMKER 183
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
GT YIAPEV + + E K DV+S G++++
Sbjct: 184 LGTAYYIAPEVLRKKYDE---KCDVWSCGVILY 213
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E + G L F+ + + + L +LY A ++ L YL + R +H DI
Sbjct: 87 IIMELCTLGELRSFLQVR---KFSLDLASLILY--AYQLSTALAYLE---SKRFVHRDIA 138
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
N+L+ C K+ DFGL++ + + + + ++APE NF + SDV
Sbjct: 139 ARNVLVSATDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASDV 195
Query: 168 YSYGMMVFEM--------TGVKNN 183
+ +G+ ++E+ GVKNN
Sbjct: 196 WMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 14/141 (9%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G +G + +I E++ GS + P + Q + + I +GL+YLH
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLL-RAGPFDEFQ------IATMLKEILKGLDYLH--- 137
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ + +H DIK N+LL E K++DFG+A ++ + GT ++APEV ++
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQS 195
Query: 158 FGEVSYKSDVYSYGMMVFEMT 178
K+D++S G+ E+
Sbjct: 196 --AYDSKADIWSLGITAIELA 214
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 45/220 (20%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 101 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 151
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTTLCGTLDYLPPEMIEGR 207
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEEDL 210
+ K D++S G++ +E K N R S E FP +V
Sbjct: 208 MHDE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV---------- 255
Query: 211 GLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 256 ----------TEGARDLISR---LLKHNPSQRPMLREVLE 282
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G + K L+ K + +A L Y H
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYK------ELQKLSKFDEQRTATYITELANALSYCH--- 130
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S GT+ Y+ PE+ R
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRXXLXGTLDYLPPEMIEGR 186
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 187 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 234
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 235 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 261
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
+EY HR +I+H D+KP N+LLD++ KI+DFGL+ I + + + G+ Y
Sbjct: 120 AIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT---SCGSPNY 173
Query: 149 IAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
APEV + DV+S G++++ M
Sbjct: 174 AAPEVINGKL-YAGPEVDVWSCGIVLYVM 201
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 45/220 (20%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 92 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 142
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTTLCGTLDYLPPEMIEGR 198
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEEDL 210
+ K D++S G++ +E K N R S E FP +V
Sbjct: 199 MHDE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV---------- 246
Query: 211 GLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 247 ----------TEGARDLISR---LLKHNPSQRPMLREVLE 273
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNIL-LDEDF---CPKISDFGLAKICHGRESIVSMTG 141
I + +EYLH + ++H D+KP NIL +DE C +I DFG AK ++ MT
Sbjct: 130 IGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL-MTP 185
Query: 142 ARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM-TGVKNNANVAVDRSSEI 194
T ++APEV R + D++S G++++ M G AN D EI
Sbjct: 186 CY-TANFVAPEVLKRQGYDEG--CDIWSLGILLYTMLAGYTPFANGPSDTPEEI 236
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 80 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 130
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPE-VFCR 156
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE + R
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTTLCGTLDYLPPEXIEGR 186
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 187 XHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 234
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 235 -----------TEGARDLISR---LLKHNPSQRPXLREVLE 261
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 45/220 (20%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 76 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 126
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTDLCGTLDYLPPEMIEGR 182
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEEDL 210
+ K D++S G++ +E K N R S E FP +V
Sbjct: 183 MHDE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV---------- 230
Query: 211 GLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 231 ----------TEGARDLISR---LLKHNPSQRPMLREVLE 257
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 45/220 (20%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 75 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 125
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTDLCGTLDYLPPEMIEGR 181
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEEDL 210
+ K D++S G++ +E K N R S E FP +V
Sbjct: 182 MHDE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV---------- 229
Query: 211 GLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 230 ----------TEGARDLISR---LLKHNPSQRPMLREVLE 256
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 78 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 128
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+ R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTTLCGTLDYLPPEMIEGR 184
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 185 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 232
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 233 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 45/220 (20%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 80 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 130
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTTLCGTLDYLPPEMIEGR 186
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEEDL 210
+ K D++S G++ +E K N R S E FP +V
Sbjct: 187 MHDE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV---------- 234
Query: 211 GLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 235 ----------TEGARDLISR---LLKHNPSQRPMLREVLE 261
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNIL-LDEDF---CPKISDFGLAKICHGRESIVSMTG 141
I + +EYLH + ++H D+KP NIL +DE C +I DFG AK ++ MT
Sbjct: 130 IGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL-MTP 185
Query: 142 ARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM-TGVKNNANVAVDRSSEI 194
T ++APEV R + D++S G++++ M G AN D EI
Sbjct: 186 CY-TANFVAPEVLKRQGYDEG--CDIWSLGILLYTMLAGYTPFANGPSDTPEEI 236
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 45/220 (20%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 75 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 125
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTTLCGTLDYLPPEMIEGR 181
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEEDL 210
+ K D++S G++ +E K N R S E FP +V
Sbjct: 182 MHDE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV---------- 229
Query: 211 GLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 230 ----------TEGARDLISR---LLKHNPSQRPMLREVLE 256
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 74 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 124
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+ R
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTTLCGTLDYLPPEMIEGR 180
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 181 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 228
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 229 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 75 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 125
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+ R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTDLCGTLDYLPPEMIEGR 181
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 182 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 229
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 230 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 256
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+I E + G L F+ + + + L +LY A ++ L YL + R +H DI
Sbjct: 467 IIMELCTLGELRSFLQVR---KFSLDLASLILY--AYQLSTALAYLE---SKRFVHRDIA 518
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
N+L+ C K+ DFGL++ + + + + ++APE NF + SDV
Sbjct: 519 ARNVLVSATDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESI--NFRRFTSASDV 575
Query: 168 YSYGMMVFEM--------TGVKNN 183
+ +G+ ++E+ GVKNN
Sbjct: 576 WMFGVCMWEILMHGVKPFQGVKNN 599
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 90/221 (40%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G++ + L+ K + +A L Y H
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH--- 128
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+ R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTTLCGTLDYLPPEMIEGR 184
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 185 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 232
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 233 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 259
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 80 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 130
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+ R
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTDLCGTLDYLPPEMIEGR 186
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 187 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 234
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 235 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 261
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 79 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 129
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+ R
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTTLCGTLDYLPPEMIEGR 185
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 186 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 233
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 234 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 260
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 75 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 125
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+ R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTELCGTLDYLPPEMIEGR 181
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 182 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 229
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 230 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 256
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 29/175 (16%)
Query: 40 CFEGHRRAL-IYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCN 98
CF+ R + EFV+ G L I + + + + A I L +LH +
Sbjct: 92 CFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFY------AAEIISALMFLH---D 142
Query: 99 TRILHFDIKPHNILLDEDFCPKISDFGLAK--ICHGRESIVSMTGARGTVGYIAPEVFCR 156
I++ D+K N+LLD + K++DFG+ K IC+G V+ GT YIAPE+
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG----VTTATFCGTPDYIAPEI--- 195
Query: 157 NFGEVSYKS--DVYSYGMMVFEMT------GVKNNANV-AVDRSSEIYFPHWVYK 202
E+ Y D ++ G++++EM +N ++ + E+ +P W+++
Sbjct: 196 -LQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 90/221 (40%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G++ + L+ K + +A L Y H
Sbjct: 72 GYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH--- 122
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+ R
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTTLCGTLDYLPPEMIEGR 178
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 179 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 226
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 227 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 253
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 75 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 125
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S T GT+ Y+ PE+ R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRTXLCGTLDYLPPEMIEGR 181
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 182 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 229
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 230 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 256
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 20/143 (13%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHR---GCNTR--IL 102
LI + +GSL F+ ++ LE + L+ +AV A GL +LH G + I
Sbjct: 83 LITHYHEHGSLYDFL-QRQTLEPHLALR------LAVSAACGLAHLHVEIFGTQGKPAIA 135
Query: 103 HFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVG---YIAPEVF---CR 156
H D K N+L+ + I+D GLA + H + S G VG Y+APEV R
Sbjct: 136 HRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIR 194
Query: 157 NFGEVSYK-SDVYSYGMMVFEMT 178
SYK +D++++G++++E+
Sbjct: 195 TDCFESYKWTDIWAFGLVLWEIA 217
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
GLEYLH + I+H DIKP N+LL KIS G+A+ H + + ++G+ +
Sbjct: 121 GLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 149 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 178
PE+ +K D++S G+ ++ +T
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNIT 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+AP + + + + D ++ G++++EM
Sbjct: 200 -GTPEYLAPAIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHP----------LETNQK--------LKWEVL 79
G C G L++E+++ G L +F+ P L T + L
Sbjct: 117 GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQ 176
Query: 80 YKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSM 139
IA +A G+ YL + +H D+ N L+ E+ KI+DFGL++ + + +
Sbjct: 177 LCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAD 233
Query: 140 TGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
+ ++ PE N + +SDV++YG++++E+
Sbjct: 234 GNDAIPIRWMPPESIFYN--RYTTESDVWAYGVVLWEI 269
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 21/134 (15%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+L+ E V+ G L I EK +++ + + +I +A YLH I+H D+
Sbjct: 124 SLVLELVTGGELFDRIVEKG--YYSERDAADAVKQILEAVA----YLH---ENGIVHRDL 174
Query: 107 KPHNILLDE---DFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF--CRNFGEV 161
KP N+L D KI+DFGL+KI E V M GT GY APE+ C EV
Sbjct: 175 KPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCAPEILRGCAYGPEV 231
Query: 162 SYKSDVYSYGMMVF 175
D++S G++ +
Sbjct: 232 ----DMWSVGIITY 241
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+IYEF+S G L + + ++H K+ + + + +GL ++H +H D+K
Sbjct: 231 MIYEFMSGGELFEKVADEH-----NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLK 282
Query: 108 PHNILLDEDFCP--KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
P NI+ K+ DFGL ++S+ T GT + APEV V Y +
Sbjct: 283 PENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEV--AEGKPVGYYT 337
Query: 166 DVYSYGMMVF 175
D++S G++ +
Sbjct: 338 DMWSVGVLSY 347
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD---EDFCPKISDFGLAKICHGRESIV 137
+I + G+ Y H+ +I+H D+KP N+LL+ +D +I DFGL+ H E+
Sbjct: 130 RIIRQVLSGITYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS--TH-FEASK 183
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
GT YIAPEV + E K DV+S G++++
Sbjct: 184 KXKDKIGTAYYIAPEVLHGTYDE---KCDVWSTGVILY 218
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
+IYEF+S G L + + ++H K+ + + + +GL ++H +H D+K
Sbjct: 125 MIYEFMSGGELFEKVADEH-----NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLK 176
Query: 108 PHNILLDEDFCP--KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
P NI+ K+ DFGL ++S+ T GT + APEV V Y +
Sbjct: 177 PENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEV--AEGKPVGYYT 231
Query: 166 DVYSYGMMVF 175
D++S G++ +
Sbjct: 232 DMWSVGVLSY 241
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 49/185 (26%)
Query: 26 RNVAIKVLNETKGFCFEGH-RRA-----------------LIYEFVSNGSLEKF-----I 62
RNVAIK L ++ F + H +RA L+ F SLE+F +
Sbjct: 50 RNVAIKKL--SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIV 107
Query: 63 YEKHPLETNQKLKWEV--------LYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 114
E +Q ++ E+ LY++ VGI ++LH I+H D+KP NI++
Sbjct: 108 MELMDANLSQVIQMELDHERMSYLLYQMLVGI----KHLHSAG---IIHRDLKPSNIVVK 160
Query: 115 EDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS--DVYSYGM 172
D KI DFGLA+ + MT T Y APEV + YK D++S G+
Sbjct: 161 SDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGV 213
Query: 173 MVFEM 177
++ EM
Sbjct: 214 IMGEM 218
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK G +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC---- 220
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT Y+APE+ + D ++ G++++EM
Sbjct: 221 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAA 254
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E+VS G L +I + +E + ++ I ++Y HR ++H D+K
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEA------RRLFQQILSAVDYCHR---HMVVHRDLK 138
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
P N+LLD KI+DFGL+ + E + + + G+ Y APEV + D+
Sbjct: 139 PENVLLDAHMNAKIADFGLSNMMSDGEFLRT---SCGSPNYAAPEVISGRL-YAGPEVDI 194
Query: 168 YSYGMMVFEM 177
+S G++++ +
Sbjct: 195 WSCGVILYAL 204
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G EG + E + GSL + + E+ L ++ LY + + GLEYLH
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR-----ALYYLGQAL-EGLEYLH--- 202
Query: 98 NTRILHFDIKPHNILLDEDFC-PKISDFGLAKICHGRE----SIVSMTGARGTVGYIAPE 152
+ RILH D+K N+LL D + DFG A +C + S+++ GT ++APE
Sbjct: 203 SRRILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGKSLLTGDYIPGTETHMAPE 261
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFEM 177
V K DV+S M+ M
Sbjct: 262 VVLGR--SCDAKVDVWSSCCMMLHM 284
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 49/185 (26%)
Query: 26 RNVAIKVLNETKGFCFEGH-RRA-----------------LIYEFVSNGSLEKF-----I 62
RNVAIK L ++ F + H +RA L+ F SLE+F +
Sbjct: 50 RNVAIKKL--SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIV 107
Query: 63 YEKHPLETNQKLKWEV--------LYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 114
E +Q ++ E+ LY++ VGI ++LH I+H D+KP NI++
Sbjct: 108 MELMDANLSQVIQMELDHERMSYLLYQMLVGI----KHLHSAG---IIHRDLKPSNIVVK 160
Query: 115 EDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS--DVYSYGM 172
D KI DFGLA+ + MT T Y APEV + YK D++S G+
Sbjct: 161 SDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGV 213
Query: 173 MVFEM 177
++ EM
Sbjct: 214 IMGEM 218
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNIL-LDEDFCP---KISDFGLAKICHGRESIVSMTG 141
I + +EYLH ++H D+KP NIL +DE P +I DFG AK ++
Sbjct: 125 ITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 142 ARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFE-MTGVKNNANVAVDRSSEI 194
T ++APEV R + + D++S G++++ +TG AN D EI
Sbjct: 182 Y--TANFVAPEVLERQGYDAA--CDIWSLGVLLYTXLTGYTPFANGPDDTPEEI 231
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 167 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 220
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 221 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 250
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G EG + E + GSL + + E+ L ++ LY + + GLEYLH
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR-----ALYYLGQAL-EGLEYLH--- 183
Query: 98 NTRILHFDIKPHNILLDEDFC-PKISDFGLAKICHGRESIVS--MTG--ARGTVGYIAPE 152
+ RILH D+K N+LL D + DFG A +C + + +TG GT ++APE
Sbjct: 184 SRRILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGKDLLTGDYIPGTETHMAPE 242
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFEM 177
V K DV+S M+ M
Sbjct: 243 VVLGR--SCDAKVDVWSSCCMMLHM 265
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 90/221 (40%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 78 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 128
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S GT+ Y+ PE+ R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRAALCGTLDYLPPEMIEGR 184
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 185 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 232
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 233 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 259
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 13/130 (10%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E+VS G L +I + +E + ++ I ++Y HR ++H D+K
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEA------RRLFQQILSAVDYCHR---HMVVHRDLK 138
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
P N+LLD KI+DFGL+ + E + + G+ Y APEV + D+
Sbjct: 139 PENVLLDAHMNAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPEVISGRL-YAGPEVDI 194
Query: 168 YSYGMMVFEM 177
+S G++++ +
Sbjct: 195 WSCGVILYAL 204
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 21/169 (12%)
Query: 78 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV 137
L + AV +A G+ YL + R +H D+ N+LL KI DFGL + +
Sbjct: 122 TLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX 178
Query: 138 SMTGARGT-VGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIY 195
M R + APE R F S+ SD + +G+ ++EM + ++ S ++
Sbjct: 179 VMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 235
Query: 196 FPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPA 244
+RL ED Q I N ++V W + P DRP
Sbjct: 236 KIDKEGERLPRPEDCP-QDIYN----------VMVQCWA--HKPEDRPT 271
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 21/169 (12%)
Query: 78 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV 137
L + AV +A G+ YL + R +H D+ N+LL KI DFGL + +
Sbjct: 112 TLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX 168
Query: 138 SMTGARGT-VGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIY 195
M R + APE R F S+ SD + +G+ ++EM + ++ S ++
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 225
Query: 196 FPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPA 244
+RL ED Q I N ++V W + P DRP
Sbjct: 226 KIDKEGERLPRPEDCP-QDIYN----------VMVQCWA--HKPEDRPT 261
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 14/96 (14%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMT--GAR 143
+ RGL Y HR ++LH D+KP N+L++E K++DFGLA+ +SI + T
Sbjct: 109 LLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARA----KSIPTKTYDNEV 161
Query: 144 GTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
T+ Y P++ G Y + D++ G + +EM
Sbjct: 162 VTLWYRPPDIL---LGSTDYSTQIDMWGVGCIFYEM 194
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 90/221 (40%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 75 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 125
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S GT+ Y+ PE+ R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRAALCGTLDYLPPEMIEGR 181
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 182 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 229
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 230 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 167 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 220
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 221 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 250
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 145 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 198
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 199 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 228
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 161 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 214
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 215 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 244
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 169 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 222
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 223 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 252
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 HFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVS 162
H D+KP NIL+ D + DFG+A E + + GT+ Y APE F + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTD-EKLTQLGNTVGTLYYXAPERFSES--HAT 213
Query: 163 YKSDVYSYGMMVFE-MTG 179
Y++D+Y+ +++E +TG
Sbjct: 214 YRADIYALTCVLYECLTG 231
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 171 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 224
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 225 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 254
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 21/169 (12%)
Query: 78 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV 137
L + AV +A G+ YL + R +H D+ N+LL KI DFGL + +
Sbjct: 116 TLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 172
Query: 138 SMTGARGT-VGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIY 195
M R + APE R F S+ SD + +G+ ++EM + ++ S ++
Sbjct: 173 VMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 229
Query: 196 FPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPA 244
+RL ED Q I N ++V W + P DRP
Sbjct: 230 KIDKEGERLPRPEDCP-QDIYN----------VMVQCWA--HKPEDRPT 265
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A I EYLH + +++ D+KP N+L+D+ +++DFG AK GR +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 143 RGTVGYIAPE-VFCRNFGEVSYKSDVYSYGMMVFEMTG 179
GT +APE + + + + D ++ G++++EM
Sbjct: 200 -GTPEALAPEIILSKGYNKA---VDWWALGVLIYEMAA 233
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 21/169 (12%)
Query: 78 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV 137
L + AV +A G+ YL + R +H D+ N+LL KI DFGL + +
Sbjct: 122 TLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 178
Query: 138 SMTGARGT-VGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIY 195
M R + APE R F S+ SD + +G+ ++EM + ++ S ++
Sbjct: 179 VMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 235
Query: 196 FPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPA 244
+RL ED Q I N ++V W + P DRP
Sbjct: 236 KIDKEGERLPRPEDCP-QDIYN----------VMVQCWA--HKPEDRPT 271
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 21/169 (12%)
Query: 78 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV 137
L + AV +A G+ YL + R +H D+ N+LL KI DFGL + +
Sbjct: 112 TLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 168
Query: 138 SMTGARGT-VGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIY 195
M R + APE R F S+ SD + +G+ ++EM + ++ S ++
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 225
Query: 196 FPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPA 244
+RL ED Q I N ++V W + P DRP
Sbjct: 226 KIDKEGERLPRPEDCP-QDIYN----------VMVQCWA--HKPEDRPT 261
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 21/169 (12%)
Query: 78 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV 137
L + AV +A G+ YL + R +H D+ N+LL KI DFGL + +
Sbjct: 116 TLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 172
Query: 138 SMTGARGT-VGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIY 195
M R + APE R F S+ SD + +G+ ++EM + ++ S ++
Sbjct: 173 VMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 229
Query: 196 FPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPA 244
+RL ED Q I N ++V W + P DRP
Sbjct: 230 KIDKEGERLPRPEDCP-QDIYN----------VMVQCWA--HKPEDRPT 265
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 138 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 191
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 192 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 221
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 55 NGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILL- 113
NGS+ F + L+ Q+ K ++ I I L YLH N I H DIKP N L
Sbjct: 151 NGSIHGF---RESLDFVQREK--LISNIMRQIFSALHYLH---NQGICHRDIKPENFLFS 202
Query: 114 -DEDFCPKISDFGLAKICHGRES--IVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSY 170
++ F K+ DFGL+K + + MT GT ++APEV K D +S
Sbjct: 203 TNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA 262
Query: 171 GMMV 174
G+++
Sbjct: 263 GVLL 266
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 141 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 194
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 195 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 224
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 212 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 265
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 266 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 295
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T T
Sbjct: 112 LLQGLSFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVT 166
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 167 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 198
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 152 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 205
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 206 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 235
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 145 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 198
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 199 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 228
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 21/169 (12%)
Query: 78 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIV 137
L + AV +A G+ YL + R +H D+ N+LL KI DFGL + +
Sbjct: 112 TLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 168
Query: 138 SMTGARGT-VGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIY 195
M R + APE R F S+ SD + +G+ ++EM + ++ S ++
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 225
Query: 196 FPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPA 244
+RL ED Q I N ++V W + P DRP
Sbjct: 226 KIDKEGERLPRPEDCP-QDIYN----------VMVQCWA--HKPEDRPT 261
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 53/224 (23%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 101 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 151
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR----GTVGYIAPEV 153
+ R++H DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRDDLCGTLDYLPPEM 203
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLEL 206
+ K D++S G++ +E K N R S E FP +V
Sbjct: 204 IEGRMHDE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV------ 255
Query: 207 EEDLGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 256 --------------TEGARDLISR---LLKHNPSQRPMLREVLE 282
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T T
Sbjct: 111 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVT 165
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 166 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 197
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T T
Sbjct: 119 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVT 173
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 174 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 205
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T T
Sbjct: 112 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVT 166
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 167 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 198
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 134 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 187
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 188 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 217
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T T
Sbjct: 112 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVT 166
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 167 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T T
Sbjct: 111 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVT 165
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 166 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 197
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 186
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 187 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 186
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 187 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T T
Sbjct: 111 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 166 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 197
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T T
Sbjct: 112 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVT 166
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 167 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T T
Sbjct: 111 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVT 165
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 166 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 197
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 186
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 187 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T T
Sbjct: 113 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVT 167
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 168 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 199
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 186
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 187 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 137 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR--- 190
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 191 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 146 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 199
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 200 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 229
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T T
Sbjct: 116 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVT 170
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 171 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 202
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 91/221 (41%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 77 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 127
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI++FG + H S T GT+ Y+ PE+ R
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSS--RRTTLCGTLDYLPPEMIEGR 183
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 184 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 231
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 232 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 258
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 91/221 (41%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 78 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 128
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI++FG + H S T GT+ Y+ PE+ R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSS--RRTTLCGTLDYLPPEMIEGR 184
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 185 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 232
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 233 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 259
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 89/220 (40%), Gaps = 45/220 (20%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 76 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 126
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
+ R++H DIKP N+LL KI+DFG + H S GT+ Y+ PE+
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLC--GTLDYLPPEMIEGR 182
Query: 158 FGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEEDL 210
+ K D++S G++ +E K N R S E FP +V
Sbjct: 183 MHDE--KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV---------- 230
Query: 211 GLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 231 ----------TEGARDLISR---LLKHNPSQRPMLREVLE 257
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 186
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 187 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 186
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 187 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTV 146
R L Y+H + I H DIKP N+LLD D K+ DFG AK E VS +R
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR--- 186
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG Y S DV+S G ++ E+
Sbjct: 187 YYRAPELI---FGATDYTSSIDVWSAGCVLAEL 216
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 90/221 (40%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 78 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 128
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S GT+ Y+ PE+ R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRDDLCGTLDYLPPEMIEGR 184
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 185 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 232
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 233 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 259
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 90/221 (40%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 77 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 127
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S GT+ Y+ PE+ R
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRXXLCGTLDYLPPEMIEGR 183
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 184 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 231
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 232 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 258
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 45/220 (20%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 75 GYFHDSTRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 125
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ +++H DIKP N+LL KI+DFG + H S GT+ Y+ PE+ R
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRAALCGTLDYLPPEMIEGR 181
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVKN--NANVAVDRSSEIYFPHWVYKRLELEE----DL 210
E K D++S G++ +E K AN D YKR+ E D
Sbjct: 182 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQD----------TYKRISRVEFTFPDF 228
Query: 211 GLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
+G AR +I +++NPS RP + V+E
Sbjct: 229 VTEG---------ARDLISR---LLKHNPSQRPMLREVLE 256
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 89/221 (40%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G++ + L+ K + +A L Y H
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYR------ELQKLSKFDEQRTATYITELANALSYCH--- 128
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S GT+ Y+ PE+ R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRXXLCGTLDYLPPEMIEGR 184
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 185 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 232
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 233 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 90/221 (40%), Gaps = 47/221 (21%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G+ + R LI E+ G+ +Y + L+ K + +A L Y H
Sbjct: 75 GYFHDATRVYLILEYAPLGT----VYRE--LQKLSKFDEQRTATYITELANALSYCH--- 125
Query: 98 NTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF-CR 156
+ R++H DIKP N+LL KI+DFG + H S GT+ Y+ PE+ R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSS--RRXXLCGTLDYLPPEMIEGR 181
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK-----NNANVAVDRSS--EIYFPHWVYKRLELEED 209
E K D++S G++ +E K N R S E FP +V
Sbjct: 182 MHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV--------- 229
Query: 210 LGLQGIENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVVE 250
E AR +I +++NPS RP + V+E
Sbjct: 230 -----------TEGARDLISR---LLKHNPSQRPMLREVLE 256
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILL---DEDFCPKISDFGLAKICHGRESIVSMTGA 142
+ ++YLH I+H D+KP N+L +E+ I+DFGL+K+ E M+ A
Sbjct: 115 VLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTA 167
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
GT GY+APEV + S D +S G++ +
Sbjct: 168 CGTPGYVAPEVLAQK--PYSKAVDCWSIGVITY 198
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 49/185 (26%)
Query: 26 RNVAIKVLNETKGFCFEGH-RRA-----------------LIYEFVSNGSLEKF-----I 62
RNVAIK L ++ F + H +RA L+ F SLE+F +
Sbjct: 50 RNVAIKKL--SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIV 107
Query: 63 YEKHPLETNQKLKWEV--------LYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD 114
E +Q ++ E+ LY++ VGI ++LH I+H D+KP NI++
Sbjct: 108 MELMDANLSQVIQMELDHERMSYLLYQMLVGI----KHLHSAG---IIHRDLKPSNIVVK 160
Query: 115 EDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS--DVYSYGM 172
D KI DFGLA+ + MT T Y APEV + YK D++S G
Sbjct: 161 SDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGC 213
Query: 173 MVFEM 177
++ EM
Sbjct: 214 IMGEM 218
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDF-CPKISDFGLAKICHGRESIVSMTGARG 144
+ R L Y+H + I H DIKP N+LLD K+ DFG AKI E VS +R
Sbjct: 150 LLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR- 205
Query: 145 TVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y APE+ FG +Y + D++S G ++ E+
Sbjct: 206 --YYRAPELI---FGATNYTTNIDIWSTGCVMAEL 235
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 92/212 (43%), Gaps = 27/212 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
LI ++ GSL ++E TN + K A+ +ARG+ +LH I +
Sbjct: 85 TLITHWMPYGSLYNVLHEG----TNFVVDQSQAVKFALDMARGMAFLH-TLEPLIPRHAL 139
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS- 165
++++DED +IS +A + +S G ++APE + + + +S
Sbjct: 140 NSRSVMIDEDMTARIS---MADVKFSFQS----PGRMYAPAWVAPEALQKKPEDTNRRSA 192
Query: 166 DVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYAR 225
D++S+ ++++E+ + E+ F +E+ + L+G+ +
Sbjct: 193 DMWSFAVLLWELV------------TREVPFAD--LSNMEIGMKVALEGLRPTIPPGISP 238
Query: 226 KMILVSLWCIQNNPSDRPAMNRVVEMLEGSLD 257
+ + C+ +P+ RP + +V +LE D
Sbjct: 239 HVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+LI+E+V+N K +Y P T+ +++ + + + L+Y H + I+H D+
Sbjct: 125 SLIFEYVNNTDF-KVLY---PTLTDYDIRYYI-----YELLKALDYCH---SQGIMHRDV 172
Query: 107 KPHNILLDEDFCP-KISDFGLAKICH-GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYK 164
KPHN+++D + ++ D+GLA+ H G+E V + + PE+ + + Y
Sbjct: 173 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FKGPELLV-DLQDYDYS 227
Query: 165 SDVYSYGMMVFEM 177
D++S G M M
Sbjct: 228 LDMWSLGCMFAGM 240
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR-- 143
I+ L +LH+ I++ D+KP NI+L+ K++DFGL K ESI T
Sbjct: 130 ISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-----ESIHDGTVTHXF 181
Query: 144 -GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R+ + D +S G ++++M
Sbjct: 182 CGTIEYMAPEILMRSGHNRAV--DWWSLGALMYDM 214
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 19/133 (14%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+LI+E+V+N K +Y P T+ +++ + + + L+Y H + I+H D+
Sbjct: 105 SLIFEYVNNTDF-KVLY---PTLTDYDIRYYI-----YELLKALDYCH---SQGIMHRDV 152
Query: 107 KPHNILLDEDFCP-KISDFGLAKICH-GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYK 164
KPHN+++D + ++ D+GLA+ H G+E V + + + PE+ + + Y
Sbjct: 153 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV----ASRYFKGPELLV-DLQDYDYS 207
Query: 165 SDVYSYGMMVFEM 177
D++S G M M
Sbjct: 208 LDMWSLGCMFAGM 220
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 19/133 (14%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+LI+E+V+N K +Y P T+ +++ + + + L+Y H + I+H D+
Sbjct: 104 SLIFEYVNNTDF-KVLY---PTLTDYDIRYYI-----YELLKALDYCH---SQGIMHRDV 151
Query: 107 KPHNILLDEDFCP-KISDFGLAKICH-GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYK 164
KPHN+++D + ++ D+GLA+ H G+E V + + + PE+ + + Y
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV----ASRYFKGPELLV-DLQDYDYS 206
Query: 165 SDVYSYGMMVFEM 177
D++S G M M
Sbjct: 207 LDMWSLGCMFAGM 219
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGAR-- 143
I+ L +LH+ I++ D+KP NI+L+ K++DFGL K ESI T
Sbjct: 130 ISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-----ESIHDGTVTHTF 181
Query: 144 -GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT+ Y+APE+ R+ + D +S G ++++M
Sbjct: 182 CGTIEYMAPEILMRSGHNRAV--DWWSLGALMYDM 214
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+LI+E+V+N K +Y P T+ +++ + + + L+Y H + I+H D+
Sbjct: 104 SLIFEYVNNTDF-KVLY---PTLTDYDIRYYI-----YELLKALDYCH---SQGIMHRDV 151
Query: 107 KPHNILLDEDFCP-KISDFGLAKICH-GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYK 164
KPHN+++D + ++ D+GLA+ H G+E V + + PE+ + + Y
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FKGPELLV-DLQDYDYS 206
Query: 165 SDVYSYGMMVFEM 177
D++S G M M
Sbjct: 207 LDMWSLGCMFAGM 219
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 19/133 (14%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+LI+E+V+N K +Y P T+ +++ + + + L+Y H + I+H D+
Sbjct: 105 SLIFEYVNNTDF-KVLY---PTLTDYDIRYYI-----YELLKALDYCH---SQGIMHRDV 152
Query: 107 KPHNILLDEDFCP-KISDFGLAKICH-GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYK 164
KPHN+++D + ++ D+GLA+ H G+E V + + + PE+ + + Y
Sbjct: 153 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV----ASRYFKGPELLV-DLQDYDYS 207
Query: 165 SDVYSYGMMVFEM 177
D++S G M M
Sbjct: 208 LDMWSLGCMFAGM 220
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 19/133 (14%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+LI+E+V+N K +Y P T+ +++ + + + L+Y H + I+H D+
Sbjct: 106 SLIFEYVNNTDF-KVLY---PTLTDYDIRYYIY-----ELLKALDYCH---SQGIMHRDV 153
Query: 107 KPHNILLDEDFCP-KISDFGLAKICH-GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYK 164
KPHN+++D + ++ D+GLA+ H G+E V + + + PE+ + + Y
Sbjct: 154 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV----ASRYFKGPELLV-DLQDYDYS 208
Query: 165 SDVYSYGMMVFEM 177
D++S G M M
Sbjct: 209 LDMWSLGCMFAGM 221
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+LI+E+V+N K +Y P T+ +++ + + + L+Y H + I+H D+
Sbjct: 104 SLIFEYVNNTDF-KVLY---PTLTDYDIRYYI-----YELLKALDYCH---SQGIMHRDV 151
Query: 107 KPHNILLDEDFCP-KISDFGLAKICH-GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYK 164
KPHN+++D + ++ D+GLA+ H G+E V + + PE+ + + Y
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FKGPELLV-DLQDYDYS 206
Query: 165 SDVYSYGMMVFEM 177
D++S G M M
Sbjct: 207 LDMWSLGCMFAGM 219
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+LI+E+V+N K +Y P T+ +++ + + + L+Y H + I+H D+
Sbjct: 104 SLIFEYVNNTDF-KVLY---PTLTDYDIRYYI-----YELLKALDYCH---SQGIMHRDV 151
Query: 107 KPHNILLDEDFCP-KISDFGLAKICH-GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYK 164
KPHN+++D + ++ D+GLA+ H G+E V + + PE+ + + Y
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FKGPELLV-DLQDYDYS 206
Query: 165 SDVYSYGMMVFEM 177
D++S G M M
Sbjct: 207 LDMWSLGCMFAGM 219
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+LI+E+V+N K +Y P T+ +++ + + + L+Y H + I+H D+
Sbjct: 104 SLIFEYVNNTDF-KVLY---PTLTDYDIRYYI-----YELLKALDYCH---SQGIMHRDV 151
Query: 107 KPHNILLDEDFCP-KISDFGLAKICH-GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYK 164
KPHN+++D + ++ D+GLA+ H G+E V + + PE+ + + Y
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FKGPELLV-DLQDYDYS 206
Query: 165 SDVYSYGMMVFEM 177
D++S G M M
Sbjct: 207 LDMWSLGCMFAGM 219
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
+LI+E+V+N K +Y P T+ +++ + + + L+Y H + I+H D+
Sbjct: 104 SLIFEYVNNTDF-KVLY---PTLTDYDIRYYI-----YELLKALDYCH---SQGIMHRDV 151
Query: 107 KPHNILLDEDFCP-KISDFGLAKICH-GRESIVSMTGARGTVGYIAPEVFCRNFGEVSYK 164
KPHN+++D + ++ D+GLA+ H G+E V + + PE+ + + Y
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FKGPELLV-DLQDYDYS 206
Query: 165 SDVYSYGMMVFEM 177
D++S G M M
Sbjct: 207 LDMWSLGCMFAGM 219
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 18/142 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC-----NTRIL 102
LI ++ NGSL ++ + L + + K+A GL +LH I
Sbjct: 112 LITDYHENGSLYDYL-------KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164
Query: 103 HFDIKPHNILLDEDFCPKISDFGLAK--ICHGRESIVSMTGARGTVGYIAPEV----FCR 156
H D+K NIL+ ++ I+D GLA I E + GT Y+ PEV R
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNR 224
Query: 157 NFGEVSYKSDVYSYGMMVFEMT 178
N + +D+YS+G++++E+
Sbjct: 225 NHFQSYIMADMYSFGLILWEVA 246
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T T
Sbjct: 112 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVT 166
Query: 146 VGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
+ Y APE+ G Y + D++S G + EM
Sbjct: 167 LWYRAPEIL---LGXKYYSTAVDIWSLGCIFAEMV 198
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 15/128 (11%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI EF+S G L +++ E + + EV+ + GL+++H I+H DIK
Sbjct: 125 LILEFLSGGEL----FDRIAAEDYKMSEAEVINYMRQA-CEGLKHMHEHS---IVHLDIK 176
Query: 108 PHNILLDEDFCP--KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
P NI+ + KI DFGLA + E IV +T A T + APE+ R V + +
Sbjct: 177 PENIMCETKKASSVKIIDFGLATKLNPDE-IVKVTTA--TAEFAAPEIVDRE--PVGFYT 231
Query: 166 DVYSYGMM 173
D+++ G++
Sbjct: 232 DMWAIGVL 239
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 30 IKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARG 89
I + N + FE I + + L + I + Q L + + R
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-------STQMLSDDHIQYFIYQTLRA 124
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH----------GRESIVSM 139
++ LH G N ++H D+KP N+L++ + K+ DFGLA+I G++S M
Sbjct: 125 VKVLH-GSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS--GM 179
Query: 140 TGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T T Y APEV + + S DV+S G ++ E+
Sbjct: 180 TEXVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T T
Sbjct: 119 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVT 173
Query: 146 VGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
+ Y APE+ G Y + D++S G + EM
Sbjct: 174 LWYRAPEIL---LGXKYYSTAVDIWSLGCIFAEMV 205
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+A L Y H + R++H DIKP N+LL + KI+DFG + H S T GT
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSS--RRTTLCGT 173
Query: 146 VGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEM 177
+ Y+ PE+ R E K D++S G++ +E
Sbjct: 174 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEF 203
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 40 CFEGHRRA-LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCN 98
CF+ R + E+V+ G L I + + V Y A IA GL +L +
Sbjct: 410 CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA----VFY--AAEIAIGLFFLQ---S 460
Query: 99 TRILHFDIKPHNILLDEDFCPKISDFGLAK--ICHGRESIVSMTGARGTVGYIAPEVFCR 156
I++ D+K N++LD + KI+DFG+ K I G V+ GT YIAPE+
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFCGTPDYIAPEIIA- 515
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+ D +++G++++EM
Sbjct: 516 -YQPYGKSVDWWAFGVLLYEM 535
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L++EF+S L+KF+ L L+++ +GL + H + R+LH D+K
Sbjct: 82 LVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLK 133
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF--CRNFGEVSYKS 165
P N+L++ + K++DFGLA+ + + T+ Y APE+ C+ + S
Sbjct: 134 PENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAV 188
Query: 166 DVYSYGMMVFEMT 178
D++S G + EM
Sbjct: 189 DIWSLGCIFAEMV 201
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 40 CFEGHRRA-LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCN 98
CF+ R + E+V+ G L I + + V Y A IA GL +L +
Sbjct: 89 CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA----VFY--AAEIAIGLFFLQ---S 139
Query: 99 TRILHFDIKPHNILLDEDFCPKISDFGLAK--ICHGRESIVSMTGARGTVGYIAPEVFCR 156
I++ D+K N++LD + KI+DFG+ K I G V+ GT YIAPE+
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFCGTPDYIAPEIIA- 194
Query: 157 NFGEVSYKSDVYSYGMMVFEM 177
+ D +++G++++EM
Sbjct: 195 -YQPYGKSVDWWAFGVLLYEM 214
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 78 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGR-ESI 136
+L K+ V I + L YL ++H D+KP NILLDE K+ DFG++ GR
Sbjct: 125 ILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGIS----GRLVDD 178
Query: 137 VSMTGARGTVGYIAPEVF---CRNFGEVSYKSDVYSYGMMVFEMT 178
+ + G Y+APE + ++DV+S G+ + E+
Sbjct: 179 KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA 223
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
L++EF+S L+KF+ L L+++ +GL + H + R+LH D+K
Sbjct: 80 LVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---SHRVLHRDLK 131
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF--CRNFGEVSYKS 165
P N+L++ + K++DFGLA+ + + T+ Y APE+ C+ + S
Sbjct: 132 PENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILLGCKYY---STAV 186
Query: 166 DVYSYGMMVFEMT 178
D++S G + EM
Sbjct: 187 DIWSLGCIFAEMV 199
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G EG + E + GSL + I + L ++ LY + + GLEYLH
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-----ALYYLGQAL-EGLEYLH--- 167
Query: 98 NTRILHFDIKPHNILLDEDFC-PKISDFGLAKICHGRE----SIVSMTGARGTVGYIAPE 152
RILH D+K N+LL D + DFG A +C + S+++ GT ++APE
Sbjct: 168 TRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGDYIPGTETHMAPE 226
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFEM 177
V K D++S M+ M
Sbjct: 227 VVMGK--PCDAKVDIWSSCCMMLHM 249
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 26 RNVAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVG 85
R + +++L++ K G +++E + + L+ I + Q L + KI
Sbjct: 100 REMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNY-----QGLPLPCVKKIIQQ 154
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILL 113
+ +GL+YLH C RI+H DIKP NILL
Sbjct: 155 VLQGLDYLHTKC--RIIHTDIKPENILL 180
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 22/150 (14%)
Query: 35 ETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLH 94
E K HR LI+E+ N L+K+ ++ N + V+ + G+ + H
Sbjct: 97 ELKSVIHHNHRLHLIFEYAEN-DLKKY------MDKNPDVSMRVIKSFLYQLINGVNFCH 149
Query: 95 RGCNTRILHFDIKPHNILL---DEDFCP--KISDFGLAKICHGRESIVSMTGARGTVGYI 149
+ R LH D+KP N+LL D P KI DFGLA+ I T T+ Y
Sbjct: 150 ---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG--IPIRQFTHEIITLWYR 204
Query: 150 APEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
PE+ G Y + D++S + EM
Sbjct: 205 PPEIL---LGSRHYSTSVDIWSIACIWAEM 231
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ G+ Y H + R+LH D+KP N+L++ + KI+DFGLA+ + T T
Sbjct: 109 LLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVT 163
Query: 146 VGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
+ Y AP+V G Y + D++S G + EM
Sbjct: 164 LWYRAPDVL---MGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA 142
A IA L YLH + I++ D+KP NILLD ++DFGL K S S
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC- 200
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GT Y+APEV + D + G +++EM
Sbjct: 201 -GTPEYLAPEVLHKQ--PYDRTVDWWCLGAVLYEM 232
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 30 IKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARG 89
I + N + FE I + + L + I + Q L + + R
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-------STQMLSDDHIQYFIYQTLRA 124
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH----------GRESIVSM 139
++ LH G N ++H D+KP N+L++ + K+ DFGLA+I G++S M
Sbjct: 125 VKVLH-GSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS--GM 179
Query: 140 TGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T T Y APEV + + S DV+S G ++ E+
Sbjct: 180 TEYVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 13/91 (14%)
Query: 26 RNVAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFI---YEKHPLETNQKLKWEVLYKI 82
R + +++L++ K G +++E + + L+ I Y+ PL +K+ +VL
Sbjct: 84 REMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVL--- 140
Query: 83 AVGIARGLEYLHRGCNTRILHFDIKPHNILL 113
+GL+YLH C RI+H DIKP NILL
Sbjct: 141 -----QGLDYLHTKC--RIIHTDIKPENILL 164
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 112 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 166
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 167 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 112 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 166
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 167 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 198
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 28/142 (19%)
Query: 34 NETKGFCFEGHRRALIYEF-VSNGSLEKFIYEKHPLETNQKLKWE-----VLYKIAVGIA 87
N + +C E R L + N +L+ + K+ + N KL+ E +L +IA G+A
Sbjct: 70 NVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLD-------------EDFCPKISDFGL-AKICHGR 133
+LH + +I+H D+KP NIL+ E+ ISDFGL K+ G+
Sbjct: 130 ----HLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 134 ESI-VSMTGARGTVGYIAPEVF 154
S ++ GT G+ APE+
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELL 204
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ G+ Y H + R+LH D+KP N+L++ + KI+DFGLA+ + T T
Sbjct: 109 LLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVT 163
Query: 146 VGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
+ Y AP+V G Y + D++S G + EM
Sbjct: 164 LWYRAPDVL---MGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 114 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 168
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 169 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 200
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 115 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 169
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 170 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 201
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 115 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 169
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 170 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 114 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 168
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 169 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 111 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 165
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 166 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 197
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 112 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 166
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 167 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 198
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 111 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 165
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 166 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 197
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 112 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 166
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 167 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 198
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 113 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 167
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 168 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 199
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 116 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 170
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 171 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 115 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 169
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 170 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 201
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 115 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 169
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 170 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 115 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 169
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 170 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 201
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G EG + E + GSL + I + L ++ LY + + GLEYLH
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-----ALYYLGQAL-EGLEYLH--- 181
Query: 98 NTRILHFDIKPHNILLDEDFC-PKISDFGLAKICHGRE----SIVSMTGARGTVGYIAPE 152
RILH D+K N+LL D + DFG A +C + S+++ GT ++APE
Sbjct: 182 TRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGDYIPGTETHMAPE 240
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFEM 177
V K D++S M+ M
Sbjct: 241 VVMGK--PCDAKVDIWSSCCMMLHM 263
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 114 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 168
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 169 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 113 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 167
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 168 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 199
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 38 GFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGC 97
G EG + E + GSL + I + L ++ LY + + GLEYLH
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-----ALYYLGQAL-EGLEYLH--- 183
Query: 98 NTRILHFDIKPHNILLDEDFC-PKISDFGLAKICHGRE----SIVSMTGARGTVGYIAPE 152
RILH D+K N+LL D + DFG A +C + S+++ GT ++APE
Sbjct: 184 TRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGDYIPGTETHMAPE 242
Query: 153 VFCRNFGEVSYKSDVYSYGMMVFEM 177
V K D++S M+ M
Sbjct: 243 VVMGK--PCDAKVDIWSSCCMMLHM 265
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ G+ Y H + R+LH D+KP N+L++ + KI+DFGLA+ + T T
Sbjct: 109 LLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEIVT 163
Query: 146 VGYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
+ Y AP+V G Y + D++S G + EM
Sbjct: 164 LWYRAPDVL---MGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 114 LLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 168
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 169 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 113 LLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 167
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 168 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 199
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+ +GL + H + R+LH D+KP N+L++ + K++DFGLA+ + + T
Sbjct: 112 LLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVT 166
Query: 146 VGYIAPEVF--CRNFGEVSYKSDVYSYGMMVFEMT 178
+ Y APE+ C+ + S D++S G + EM
Sbjct: 167 LWYRAPEILLGCKYY---STAVDIWSLGCIFAEMV 198
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 192 RAPEVIL----GMGYKENVDIWSVGCIMGEMV 219
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 82 IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTG 141
+A+ L Y+HR DIKP N+LLD + +++DFG + + + V +
Sbjct: 186 LAIDSIHQLHYVHR---------DIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSV 235
Query: 142 ARGTVGYIAPEVFCR---NFGEVSYKSDVYSYGMMVFEM 177
A GT YI+PE+ G+ + D +S G+ ++EM
Sbjct: 236 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 274
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 82 IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTG 141
+A+ L Y+HR DIKP N+LLD + +++DFG + + + V +
Sbjct: 202 LAIDSIHQLHYVHR---------DIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSV 251
Query: 142 ARGTVGYIAPEVFCR---NFGEVSYKSDVYSYGMMVFEM 177
A GT YI+PE+ G+ + D +S G+ ++EM
Sbjct: 252 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 290
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 36/177 (20%)
Query: 28 VAIKVLNET-------KGFCFEGHRRALIYEF-VSNGSLEKFIYEKHPLETNQKLKWE-- 77
+ IK+L E+ + +C E R L + N +L+ + K+ + N KL+ E
Sbjct: 75 MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYN 134
Query: 78 ---VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD-------------EDFCPKI 121
+L +IA G+A +LH + +I+H D+KP NIL+ E+ I
Sbjct: 135 PISLLRQIASGVA----HLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 187
Query: 122 SDFGLAKICHGRESIV--SMTGARGTVGYIAPEVFCRNFGEVSYKS-DVYSYGMMVF 175
SDFGL K + ++ GT G+ APE+ + +S D++S G + +
Sbjct: 188 SDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY 244
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 192 RAPEVIL----GMGYKENVDIWSVGCIMGEMV 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 192 RAPEVIL----GMGYKENVDIWSVGCIMGEMV 219
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
APEV + YK D++S G ++ EM
Sbjct: 192 RAPEVILG----MGYKENVDIWSVGCIMGEM 218
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 25/138 (18%)
Query: 47 ALIYEFVSNGSL-EKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFD 105
A+I E+ S G L E+ E + ++ L G+ Y H + +I H D
Sbjct: 92 AIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS-------GVSYCH---SMQICHRD 141
Query: 106 IKPHNILLDEDFCP--KISDFGLAK--ICHGRESIVSMTGARGTVGYIAPEVFCRN--FG 159
+K N LLD P KI DFG +K + H + GT YIAPEV R G
Sbjct: 142 LKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK-----STVGTPAYIAPEVLLRQEYDG 196
Query: 160 EVSYKSDVYSYGMMVFEM 177
++ +DV+S G+ ++ M
Sbjct: 197 KI---ADVWSCGVTLYVM 211
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 17/95 (17%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCP--KISDFGLAK--ICHGRESIVSMTGARG 144
G+ Y H ++ H D+K N LLD P KI+DFG +K + H + A G
Sbjct: 127 GVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPK-----SAVG 178
Query: 145 TVGYIAPEVFCRN--FGEVSYKSDVYSYGMMVFEM 177
T YIAPEV + G+V +DV+S G+ ++ M
Sbjct: 179 TPAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVM 210
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 36/177 (20%)
Query: 28 VAIKVLNET-------KGFCFEGHRRALIYEF-VSNGSLEKFIYEKHPLETNQKLKWE-- 77
+ IK+L E+ + +C E R L + N +L+ + K+ + N KL+ E
Sbjct: 75 MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYN 134
Query: 78 ---VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLD-------------EDFCPKI 121
+L +IA G+A +LH + +I+H D+KP NIL+ E+ I
Sbjct: 135 PISLLRQIASGVA----HLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 187
Query: 122 SDFGLAKICHGRESIV--SMTGARGTVGYIAPEVFCRNFGEVSYKS-DVYSYGMMVF 175
SDFGL K + ++ GT G+ APE+ + +S D++S G + +
Sbjct: 188 SDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY 244
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E V+N ++ + T+ +++ +Y+I + L+Y H + I+H D+
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KALDYCH---SMGIMHRDV 157
Query: 107 KPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+L+D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 158 KPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSL 213
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 214 DMWSLGCMLASM 225
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYY 184
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 185 RAPEVIL----GMGYKENVDIWSVGCIMGEMV 212
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
APEV + YK D++S G ++ EM
Sbjct: 192 RAPEVILG----MGYKENVDIWSVGCIMGEM 218
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 192 RAPEVIL----GMGYKENVDIWSVGCIMGEMV 219
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 96 GC----NTRILHFDIKPHNILLDE-DFCPKISDFGLAKICHGRESIVSMTGARGTVGYIA 150
GC + + H DIKPHN+L++E D K+ DFG AK E V+ +R Y A
Sbjct: 143 GCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSR---YYRA 199
Query: 151 PEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
PE+ FG Y + D++S G + EM
Sbjct: 200 PELI---FGNQHYTTAVDIWSVGCIFAEM 225
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 38/141 (26%)
Query: 78 VLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKIC------- 130
+LY + VG+ +Y+H ILH D+KP N L+++D K+ DFGLA+
Sbjct: 161 LLYNLLVGV----KYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGN 213
Query: 131 ------------------HGRESIVSMTGARGTVGYIAPEVFC--RNFGEVSYKSDVYSY 170
H + +TG T Y APE+ N+ E DV+S
Sbjct: 214 SQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEA---IDVWSI 270
Query: 171 GMMVFEMTG-VKNNANVAVDR 190
G + E+ +K N DR
Sbjct: 271 GCIFAELLNMIKENVAYHADR 291
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPEVVTRYY 191
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
APEV + YK D++S G ++ EM
Sbjct: 192 RAPEVIL----GMGYKENVDIWSVGCIMGEM 218
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ +V R Y
Sbjct: 140 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTR---YY 193
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
APEV + YK D++S G ++ EM
Sbjct: 194 RAPEVIL----GMGYKENVDIWSVGCIMGEM 220
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 77 EVLYKIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
E + K+A+ A GL +LH G + I H D+K NIL+ ++ I+D GLA
Sbjct: 139 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 198
Query: 132 GRESIVSMTGAR--GTVGYIAPEVFCRNFG----EVSYKSDVYSYGMMVFEMT 178
+ + GT Y+APEV + E ++D+Y+ G++ +E+
Sbjct: 199 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 4/45 (8%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLD-EDFCPKISDFGLAKI 129
+ RGL+Y+H + +LH D+KP N+ ++ ED KI DFGLA+I
Sbjct: 129 LLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 12/94 (12%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILL--DEDFCP-KISDFGLAKICHGRESIVSMTGA 142
I L Y H + I+H D+KP N+LL E+ P K+ DFG+A I G +V+ G
Sbjct: 139 ILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVA-GGR 193
Query: 143 RGTVGYIAPEVFCRN-FGEVSYKSDVYSYGMMVF 175
GT ++APEV R +G+ DV+ G+++F
Sbjct: 194 VGTPHFMAPEVVKREPYGK---PVDVWGCGVILF 224
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 77 EVLYKIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
E + K+A+ A GL +LH G + I H D+K NIL+ ++ I+D GLA
Sbjct: 126 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 185
Query: 132 GRESIVSMTGAR--GTVGYIAPEVFCRNFG----EVSYKSDVYSYGMMVFEMT 178
+ + GT Y+APEV + E ++D+Y+ G++ +E+
Sbjct: 186 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 28/144 (19%)
Query: 45 RRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHF 104
+ L++EF + L+K+ N L E++ + +GL + H + +LH
Sbjct: 75 KLTLVFEFC-DQDLKKYFDS-----CNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 105 DIKPHNILLDEDFCPKISDFGLAKI------CHGRESIVSMTGARGTVGYIAPEVFCRNF 158
D+KP N+L++ + K++DFGLA+ C+ E + T+ Y P+V F
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--------TLWYRPPDVL---F 174
Query: 159 GEVSYKS--DVYSYGMMVFEMTGV 180
G Y + D++S G + E+
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANA 198
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 77 EVLYKIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
E + K+A+ A GL +LH G + I H D+K NIL+ ++ I+D GLA
Sbjct: 101 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 160
Query: 132 GRESIVSMTGAR--GTVGYIAPEVFCRNFG----EVSYKSDVYSYGMMVFEMT 178
+ + GT Y+APEV + E ++D+Y+ G++ +E+
Sbjct: 161 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 77 EVLYKIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
E + K+A+ A GL +LH G + I H D+K NIL+ ++ I+D GLA
Sbjct: 106 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 165
Query: 132 GRESIVSMTGAR--GTVGYIAPEVFCRNFG----EVSYKSDVYSYGMMVFEMT 178
+ + GT Y+APEV + E ++D+Y+ G++ +E+
Sbjct: 166 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
APEV + YK D++S G ++ EM
Sbjct: 192 RAPEVILG----MGYKENVDIWSVGCIMGEM 218
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 77 EVLYKIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
E + K+A+ A GL +LH G + I H D+K NIL+ ++ I+D GLA
Sbjct: 100 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159
Query: 132 GRESIVSMTGAR--GTVGYIAPEVFCRNFG----EVSYKSDVYSYGMMVFEMT 178
+ + GT Y+APEV + E ++D+Y+ G++ +E+
Sbjct: 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 66 HPLETNQ-KLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 124
H LE N+ LK L ++ I + + YL + +H DI NIL+ C K+ DF
Sbjct: 113 HYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDF 169
Query: 125 GLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GL++ E + R + +++PE NF + SDV+ + + ++E+
Sbjct: 170 GLSRYIED-EDYYKASVTRLPIKWMSPESI--NFRRFTTASDVWMFAVCMWEI 219
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 66 HPLETNQ-KLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 124
H LE N+ LK L ++ I + + YL + +H DI NIL+ C K+ DF
Sbjct: 97 HYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDF 153
Query: 125 GLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GL++ E + R + +++PE NF + SDV+ + + ++E+
Sbjct: 154 GLSRYIED-EDYYKASVTRLPIKWMSPESI--NFRRFTTASDVWMFAVCMWEI 203
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
APEV + YK D++S G ++ EM
Sbjct: 192 RAPEVILG----MGYKENVDIWSVGCIMGEM 218
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 77 EVLYKIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICH 131
E + K+A+ A GL +LH G + I H D+K NIL+ ++ I+D GLA
Sbjct: 103 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 162
Query: 132 GRESIVSMTGAR--GTVGYIAPEVFCRNFG----EVSYKSDVYSYGMMVFEMT 178
+ + GT Y+APEV + E ++D+Y+ G++ +E+
Sbjct: 163 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 66 HPLETNQ-KLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDF 124
H LE N+ LK L ++ I + + YL + +H DI NIL+ C K+ DF
Sbjct: 101 HYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDF 157
Query: 125 GLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
GL++ E + R + +++PE NF + SDV+ + + ++E+
Sbjct: 158 GLSRYIED-EDYYKASVTRLPIKWMSPESI--NFRRFTTASDVWMFAVCMWEI 207
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
APEV + YK D++S G ++ EM
Sbjct: 192 RAPEVIL----GMGYKENVDIWSVGCIMGEM 218
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 192
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
APEV + YK D++S G ++ EM
Sbjct: 193 RAPEVILG----MGYKENVDIWSVGCIMGEM 219
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E V+N ++ + T+ +++ +Y+I + L+Y H + I+H D+
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KALDYCH---SMGIMHRDV 157
Query: 107 KPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSL 213
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 214 DMWSLGCMLASM 225
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 192
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 193 RAPEVIL----GMGYKENVDIWSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 137 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 190
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 191 RAPEVIL----GMGYKENVDIWSVGCIMGEMV 218
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E V+N ++ + T+ +++ +Y+I + L+Y H + I+H D+
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KALDYCH---SMGIMHRDV 157
Query: 107 KPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSL 213
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 214 DMWSLGCMLASM 225
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 192 RAPEVIL----GMGYKENVDIWSVGCIMGEMV 219
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E V+N ++ + T+ +++ +Y+I + L+Y H + I+H D+
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KALDYCH---SMGIMHRDV 157
Query: 107 KPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSL 213
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 214 DMWSLGCMLASM 225
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E V+N ++ + T+ +++ +Y+I + L+Y H + I+H D+
Sbjct: 109 ALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KALDYCH---SMGIMHRDV 156
Query: 107 KPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 157 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSL 212
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 213 DMWSLGCMLASM 224
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 184
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 185 RAPEVIL----GMGYKENVDIWSVGCIMGEMV 212
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 191
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 192 RAPEVIL----GMGYKENVDIWSVGCIMGEMV 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 185
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 186 RAPEVIL----GMGYKENVDIWSVGCIMGEMV 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 192
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 193 RAPEVIL----GMGYKENVDIWSVGCIMGEMV 220
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E V+N ++ + T+ +++ +Y+I + L+Y H + I+H D+
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KALDYCH---SMGIMHRDV 157
Query: 107 KPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSL 213
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 214 DMWSLGCMLASM 225
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
+A L Y H + R++H DIKP N+LL + KI+DFG + H S GT
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLC--GT 173
Query: 146 VGYIAPEVF-CRNFGEVSYKSDVYSYGMMVFEM 177
+ Y+ PE+ R E K D++S G++ +E
Sbjct: 174 LDYLPPEMIEGRMHDE---KVDLWSLGVLCYEF 203
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E V+N ++ + T+ +++ +Y+I + L+Y H + I+H D+
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KALDYCH---SMGIMHRDV 157
Query: 107 KPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSL 213
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 214 DMWSLGCMLASM 225
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVG-IARGLEYLHRGCNTRILHFDI 106
LI ++++ G L + ++ ++ +I VG I LE+LH+ I++ DI
Sbjct: 136 LILDYINGGELFTHLSQRERFTEHE-------VQIYVGEIVLALEHLHK---LGIIYRDI 185
Query: 107 KPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSD 166
K NILLD + ++DFGL+K E+ + GT+ Y+AP++ D
Sbjct: 186 KLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC-GTIEYMAPDIVRGGDSGHDKAVD 244
Query: 167 VYSYGMMVFEM 177
+S G++++E+
Sbjct: 245 WWSLGVLMYEL 255
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 82 IAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTG 141
IA+ L Y+HR DIKP NIL+D + +++DFG + + + V +
Sbjct: 186 IAIDSVHQLHYVHR---------DIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSV 235
Query: 142 ARGTVGYIAPEVFCR---NFGEVSYKSDVYSYGMMVFEM 177
A GT YI+PE+ G + D +S G+ ++EM
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEM 274
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E V+N ++ + T+ +++ +Y+I + L+Y H + I+H D+
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KALDYCH---SMGIMHRDV 157
Query: 107 KPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSL 213
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 214 DMWSLGCMLASM 225
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E+++N ++ + + T+ +++ +Y++ + L+Y H + I+H D+
Sbjct: 111 ALVFEYINNTDFKQL----YQILTDFDIRF-YMYELL----KALDYCH---SKGIMHRDV 158
Query: 107 KPHNILLD-EDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 159 KPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG---PELLV-DYQMYDYSL 214
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 215 DMWSLGCMLASM 226
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 185
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 186 RAPEVIL----GMGYKENVDIWSVGCIMGEMV 213
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E V+N ++ + T+ +++ +Y+I + L+Y H + I+H D+
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KALDYCH---SMGIMHRDV 157
Query: 107 KPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSL 213
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 214 DMWSLGCMLASM 225
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E V+N ++ + T+ +++ +Y+I + L+Y H + I+H D+
Sbjct: 109 ALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KALDYCH---SMGIMHRDV 156
Query: 107 KPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 157 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSL 212
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 213 DMWSLGCMLASM 224
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E V+N ++ + T+ +++ +Y+I + L+Y H + I+H D+
Sbjct: 115 ALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KALDYCH---SMGIMHRDV 162
Query: 107 KPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 163 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSL 218
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 219 DMWSLGCMLASM 230
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E V+N ++ + T+ +++ +Y+I + L+Y H + I+H D+
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KALDYCH---SMGIMHRDV 157
Query: 107 KPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSL 213
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 214 DMWSLGCMLASM 225
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E V+N ++ + T+ +++ +Y+I + L+Y H + I+H D+
Sbjct: 108 ALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KALDYCH---SMGIMHRDV 155
Query: 107 KPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 156 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSL 211
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 212 DMWSLGCMLASM 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 229
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 230 RAPEVILG----MGYKENVDIWSVGCIMGEMV 257
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E V+N ++ + T+ +++ +Y+I + L+Y H + I+H D+
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRF-YMYEIL----KALDYCH---SMGIMHRDV 157
Query: 107 KPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSL 213
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 214 DMWSLGCMLASM 225
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 81 KIAVGIARGLEYLH-----RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRES 135
+I + IA GL +LH I H D+K NIL+ ++ I+D GLA + H + +
Sbjct: 109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQST 167
Query: 136 IVSMTGARGTVG---YIAPEVFCRNFGEVSYKS----DVYSYGMMVFEM 177
G VG Y+APEV + S D++++G++++E+
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E V+N ++ Q L + I + L+Y H + I+H D+
Sbjct: 110 ALVFEHVNNTDFKQL---------RQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDV 157
Query: 107 KPHNILLDEDFCP-KISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQMYDYSL 213
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 214 DMWSLGCMLASM 225
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
AL++E+++N ++ + + T+ +++ +Y++ + L+Y H + I+H D+
Sbjct: 116 ALVFEYINNTDFKQL----YQILTDFDIRF-YMYELL----KALDYCH---SKGIMHRDV 163
Query: 107 KPHNILLD-EDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
KPHN+++D + ++ D+GLA+ H + +R G PE+ ++ Y
Sbjct: 164 KPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG---PELLV-DYQMYDYSL 219
Query: 166 DVYSYGMMVFEM 177
D++S G M+ M
Sbjct: 220 DMWSLGCMLASM 231
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 23/158 (14%)
Query: 30 IKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARG 89
I + N + FE I + + L + I + Q L + + R
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-------STQMLSDDHIQYFIYQTLRA 124
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICH----------GRESIVSM 139
++ LH G N ++H D+KP N+L++ + K+ DFGLA+I G++S M
Sbjct: 125 VKVLH-GSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS--GM 179
Query: 140 TGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T Y APEV + + S DV+S G ++ E+
Sbjct: 180 VEFVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 229
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 230 RAPEVIL----GMGYKENVDIWSVGCIMGEMV 257
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 81 KIAVGIARGLEYLH-----RGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRES 135
+I + IA GL +LH I H D+K NIL+ ++ I+D GLA + H + +
Sbjct: 109 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQST 167
Query: 136 IVSMTGARGTVG---YIAPEVFCRNFGEVSYKS----DVYSYGMMVFEM 177
G VG Y+APEV + S D++++G++++E+
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 81 KIAVGIARGLEYLHR---GCNTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICHGRES 135
+I + IA GL +LH G + I H D+K NIL+ ++ I+D GLA + H + +
Sbjct: 138 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQST 196
Query: 136 IVSMTGARGTVG---YIAPEVFCRNFGEVSYKS----DVYSYGMMVFEM 177
G VG Y+APEV + S D++++G++++E+
Sbjct: 197 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 101 ILHFDIKPHNILLD---EDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
I+H D+KP N+LL + K++DFGLA G + + G GT GY++PEV ++
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ--AWFGFAGTPGYLSPEVLRKD 208
Query: 158 -FGEVSYKSDVYSYGMMVF 175
+G+ D+++ G++++
Sbjct: 209 PYGK---PVDIWACGVILY 224
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 29/155 (18%)
Query: 97 CNTR-ILHFDIKPHNILLD-EDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVF 154
C++R ++H DIK NIL+D C K+ DFG + H T GT Y PE
Sbjct: 155 CHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE----PYTDFDGTRVYSPPEWI 210
Query: 155 CRNFGEVSYKSDVYSYGMMVFEMTGVKNNANVAVDRSSEIYFPHWVYKRLELEEDLGLQG 214
R+ + + V+S G+++++M ++ +R EI LE +L
Sbjct: 211 SRHQYH-ALPATVWSLGILLYDMV----CGDIPFERDQEI-----------LEAELHFPA 254
Query: 215 IENEEDKEYARKMILVSLWCIQNNPSDRPAMNRVV 249
+ + R+ C+ PS RP++ ++
Sbjct: 255 HVSPDCCALIRR-------CLAPKPSSRPSLEEIL 282
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 28/142 (19%)
Query: 34 NETKGFCFEGHRRALIYEF-VSNGSLEKFIYEKHPLETNQKLKWE-----VLYKIAVGIA 87
N + +C E R L + N +L+ + K+ + N KL+ E +L +IA G+A
Sbjct: 70 NVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 88 RGLEYLHRGCNTRILHFDIKPHNILLD-------------EDFCPKISDFGLAKICHGRE 134
+LH + +I+H D+KP NIL+ E+ ISDFGL K +
Sbjct: 130 ----HLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 135 SIV--SMTGARGTVGYIAPEVF 154
++ GT G+ APE+
Sbjct: 183 XXFRXNLNNPSGTSGWRAPELL 204
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E+ S G E F Y L + ++K + I ++Y H+ RI+H D+K
Sbjct: 91 LIMEYASGG--EVFDY----LVAHGRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLK 141
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
N+LLD D KI+DFG + + + GA Y APE+F + + DV
Sbjct: 142 AENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGA---PPYAAPELFQGKKYD-GPEVDV 197
Query: 168 YSYGMMVFEMT 178
+S G++++ +
Sbjct: 198 WSLGVILYTLV 208
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 21/139 (15%)
Query: 42 EGHRRALIYEFVSNGSL-EKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTR 100
EGH LI++ V+ G L E + ++ E + + I + LE +
Sbjct: 93 EGHHY-LIFDLVTGGELFEDIVAREYYSEADA----------SHCIQQILEAVLHCHQMG 141
Query: 101 ILHFDIKPHNILLDEDF---CPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
++H D+KP N+LL K++DFGLA G + + G GT GY++PEV ++
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRKD 199
Query: 158 -FGEVSYKSDVYSYGMMVF 175
+G+ D+++ G++++
Sbjct: 200 PYGK---PVDLWACGVILY 215
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 143 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 196
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 197 RAPEVIL----GMGYKENVDLWSVGCIMGEMV 224
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 101 ILHFDIKPHNILL---DEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
I+H D+KP N+LL + K++DFGLA G + + G GT GY++PEV ++
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPEVLRKD 181
Query: 158 -FGEVSYKSDVYSYGMMVF 175
+G+ D+++ G++++
Sbjct: 182 PYGK---PVDMWACGVILY 197
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ MT T Y
Sbjct: 136 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN---FMMTPYVVTRYY 189
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ E+
Sbjct: 190 RAPEVILG----MGYKENVDIWSVGCIMGELV 217
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ + MT T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYY 185
Query: 149 IAPEVFCRNFGEVSYKS--DVYSYGMMVFEMT 178
APEV + YK D++S G ++ EM
Sbjct: 186 RAPEVILG----MGYKENVDLWSVGCIMGEMV 213
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 101 ILHFDIKPHNILL---DEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
I+H D+KP N+LL + K++DFGLA G + + G GT GY++PEV ++
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPEVLRKD 181
Query: 158 -FGEVSYKSDVYSYGMMVF 175
+G+ D+++ G++++
Sbjct: 182 PYGK---PVDMWACGVILY 197
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYI 149
LE +H I+H D+KP N L+ D K+ DFG+A + V GTV Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 150 APEVF-----CRNFG----EVSYKSDVYSYGMMVFEMTGVK----------NNANVAVDR 190
PE R G ++S KSDV+S G +++ MT K + + +D
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 283
Query: 191 SSEIYFPHWVYKRLE 205
+ EI FP K L+
Sbjct: 284 NHEIEFPDIPEKDLQ 298
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
++ E+ G L +I + L + V+++ I + Y+H + H D+K
Sbjct: 85 MVLEYCPGGELFDYIISQDRLSEEET---RVVFR---QIVSAVAYVH---SQGYAHRDLK 135
Query: 108 PHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDV 167
P N+L DE K+ DFGL G + T G++ Y APE+ + + ++DV
Sbjct: 136 PENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYAAPELI-QGKSYLGSEADV 193
Query: 168 YSYGMMVF 175
+S G++++
Sbjct: 194 WSMGILLY 201
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 26/197 (13%)
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYI 149
LE +H I+H D+KP N L+ D K+ DFG+A + V GTV Y+
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 150 APEVF-----CRNFG----EVSYKSDVYSYGMMVFEMTGVK----------NNANVAVDR 190
PE R G ++S KSDV+S G +++ MT K + + +D
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 235
Query: 191 SSEIYFPHWVYKRLELEEDLGLQGIENEEDKEYARKMILVSLWC-IQNNPSDRPAMNRVV 249
+ EI FP K L +D+ ++ + + + +L + IQ +P ++ A
Sbjct: 236 NHEIEFPDIPEKDL---QDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTE 292
Query: 250 EM--LEGSLDSLRIPPR 264
EM + G L L + PR
Sbjct: 293 EMKYVLGQLVGLNLVPR 309
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYI 149
LE +H I+H D+KP N L+ D K+ DFG+A + V GTV Y+
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 150 APEVF-----CRNFG----EVSYKSDVYSYGMMVFEMTGVK----------NNANVAVDR 190
PE R G ++S KSDV+S G +++ MT K + + +D
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 239
Query: 191 SSEIYFPHWVYKRLE 205
+ EI FP K L+
Sbjct: 240 NHEIEFPDIPEKDLQ 254
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYI 149
LE +H I+H D+KP N L+ D K+ DFG+A + V GTV Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 150 APEVF-----CRNFG----EVSYKSDVYSYGMMVFEMTGVK----------NNANVAVDR 190
PE R G ++S KSDV+S G +++ MT K + + +D
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 283
Query: 191 SSEIYFPHWVYKRLE 205
+ EI FP K L+
Sbjct: 284 NHEIEFPDIPEKDLQ 298
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYI 149
LE +H I+H D+KP N L+ D K+ DFG+A + V GTV Y+
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 150 APEVF-----CRNFG----EVSYKSDVYSYGMMVFEMTGVK----------NNANVAVDR 190
PE R G ++S KSDV+S G +++ MT K + + +D
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 255
Query: 191 SSEIYFPHWVYKRLE 205
+ EI FP K L+
Sbjct: 256 NHEIEFPDIPEKDLQ 270
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICHGRESIVSMTGAR-GTV 146
GL Y+HR +ILH D+K N+L+ D K++DFGLA+ + S + R T+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y PE+ GE Y D++ G ++ EM
Sbjct: 194 WYRPPELL---LGERDYGPPIDLWGAGCIMAEM 223
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 15/103 (14%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRE 134
+I+ + GL+Y+HR C I+H DIKP N+L++ P KI+D G A C E
Sbjct: 135 QISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDE 190
Query: 135 SIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T + T Y +PEV +D++S ++FE+
Sbjct: 191 ---HYTNSIQTREYRSPEVLLG--APWGCGADIWSTACLIFEL 228
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 15/103 (14%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDEDFCP------KISDFGLAKICHGRE 134
+I+ + GL+Y+HR C I+H DIKP N+L++ P KI+D G A C E
Sbjct: 135 QISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDE 190
Query: 135 SIVSMTGARGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
T + T Y +PEV +D++S ++FE+
Sbjct: 191 ---HYTNSIQTREYRSPEVLLG--APWGCGADIWSTACLIFEL 228
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICHGRESIVSMTGAR-GTV 146
GL Y+HR +ILH D+K N+L+ D K++DFGLA+ + S + R T+
Sbjct: 137 GLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y PE+ GE Y D++ G ++ EM
Sbjct: 194 WYRPPELL---LGERDYGPPIDLWGAGCIMAEM 223
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 101 ILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRNFGE 160
I+H DIK NI++ EDF K+ DFG A + + GT+ Y APEV N
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC---GTIEYCAPEVLMGN--- 204
Query: 161 VSYKS---DVYSYGMMVFEMTGVKNNANVAVDRSSE--IYFPHWVYKRL 204
Y+ +++S G+ ++ + + N ++ + E I+ P+ V K L
Sbjct: 205 -PYRGPELEMWSLGVTLYTLV-FEENPFCELEETVEAAIHPPYLVSKEL 251
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 24/98 (24%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ GT
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-------------GTSFM 181
Query: 149 IAPEVFCRNFGE------VSYKS--DVYSYGMMVFEMT 178
+ PEV R + + YK D++S G ++ EM
Sbjct: 182 MEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYI 149
LE +H I+H D+KP N L+ D K+ DFG+A + V GTV Y+
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 150 APEVF-----CRNFG----EVSYKSDVYSYGMMVFEMTGVK----------NNANVAVDR 190
PE R G ++S KSDV+S G +++ MT K + + +D
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 236
Query: 191 SSEIYFPHWVYKRLE 205
+ EI FP K L+
Sbjct: 237 NHEIEFPDIPEKDLQ 251
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 17/133 (12%)
Query: 48 LIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIK 107
LI E+ S G E F Y L + ++K + I ++Y H+ RI+H D+K
Sbjct: 88 LIMEYASGG--EVFDY----LVAHGRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLK 138
Query: 108 PHNILLDEDFCPKISDFGLAK--ICHGRESIVSMTGARGTVGYIAPEVFCRNFGEVSYKS 165
N+LLD D KI+DFG + G+ G+ Y APE+F + +
Sbjct: 139 AENLLLDADMNIKIADFGFSNEFTVGGKLDTFC-----GSPPYAAPELFQGKKYD-GPEV 192
Query: 166 DVYSYGMMVFEMT 178
DV+S G++++ +
Sbjct: 193 DVWSLGVILYTLV 205
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICHGRESIVSMTGAR-GTV 146
GL Y+HR +ILH D+K N+L+ D K++DFGLA+ + S + R T+
Sbjct: 137 GLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y PE+ GE Y D++ G ++ EM
Sbjct: 194 WYRPPELL---LGERDYGPPIDLWGAGCIMAEM 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICHGRESIVSMTGAR-GTV 146
GL Y+HR +ILH D+K N+L+ D K++DFGLA+ + S + R T+
Sbjct: 136 GLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 192
Query: 147 GYIAPEVFCRNFGEVSYKS--DVYSYGMMVFEM 177
Y PE+ GE Y D++ G ++ EM
Sbjct: 193 WYRPPELL---LGERDYGPPIDLWGAGCIMAEM 222
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYI 149
LE +H I+H D+KP N L+ D K+ DFG+A V GTV Y+
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 150 APEVF-----CRNFG----EVSYKSDVYSYGMMVFEMTGVK----------NNANVAVDR 190
PE R G ++S KSDV+S G +++ MT K + + +D
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 255
Query: 191 SSEIYFPHWVYKRLE 205
+ EI FP K L+
Sbjct: 256 NHEIEFPDIPEKDLQ 270
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 28/142 (19%)
Query: 47 ALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDI 106
L++EF + L+K+ N L E++ + +GL + H + +LH D+
Sbjct: 77 TLVFEFC-DQDLKKYFDS-----CNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDL 127
Query: 107 KPHNILLDEDFCPKISDFGLAKI------CHGRESIVSMTGARGTVGYIAPEVFCRNFGE 160
KP N+L++ + K+++FGLA+ C+ E + T+ Y P+V FG
Sbjct: 128 KPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--------TLWYRPPDVL---FGA 176
Query: 161 VSYKS--DVYSYGMMVFEMTGV 180
Y + D++S G + E+
Sbjct: 177 KLYSTSIDMWSAGCIFAELANA 198
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 45 RRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHF 104
R L++E + GS+ I+++ +L+ V+ + +A L++LH N I H
Sbjct: 85 RFYLVFEKMRGGSILSHIHKRRHF---NELEASVVVQ---DVASALDFLH---NKGIAHR 135
Query: 105 DIKPHNILLDE--DFCP-KISDFGLAK--ICHGRESIVS---MTGARGTVGYIAPEV--- 153
D+KP NIL + P KI DFGL +G S +S + G+ Y+APEV
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 154 FCRNFGEVSYKSDVYSYGMMVF 175
F + D++S G++++
Sbjct: 196 FSEEASIYDKRCDLWSLGVILY 217
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 24/98 (24%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ GT
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-------------GTSFM 181
Query: 149 IAPEVFCRNFGE------VSYKS--DVYSYGMMVFEMT 178
+ PEV R + + YK D++S G ++ EM
Sbjct: 182 MEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGY 148
G+++LH + I+H D+KP NI++ D KI DFGLA+ MT T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN---FMMTPYVVTRYY 191
Query: 149 IAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 178
APEV G + D++S G ++ E+
Sbjct: 192 RAPEVIL-GMGYAA-NVDIWSVGCIMGELV 219
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 21/95 (22%)
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGA------R 143
L +LH + ++H D+KP NI L K+ DFGL +V + A
Sbjct: 170 LAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGL---------LVELGTAGAGEVQE 217
Query: 144 GTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 178
G Y+APE+ ++G +DV+S G+ + E+
Sbjct: 218 GDPRYMAPELLQGSYGTA---ADVFSLGLTILEVA 249
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 9/79 (11%)
Query: 101 ILHFDIKPHNILLD---EDFCPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
++H D+KP N+LL + K++DFGLA G + + G GT GY++PEV +
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPEVLRKE 181
Query: 158 -FGEVSYKSDVYSYGMMVF 175
+G+ D+++ G++++
Sbjct: 182 AYGK---PVDIWACGVILY 197
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILL--DEDFCP-KISDFGLAKICHGRESIVSMTGA 142
I L Y H + I+H D+KPH +LL E+ P K+ FG+A I G +V+ G
Sbjct: 141 ILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVA-GGR 195
Query: 143 RGTVGYIAPEVFCRN-FGEVSYKSDVYSYGMMVF 175
GT ++APEV R +G+ DV+ G+++F
Sbjct: 196 VGTPHFMAPEVVKREPYGK---PVDVWGCGVILF 226
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 43 GHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRIL 102
G L+ + G L +F+ + +E+ L + + KI R ++++HR I+
Sbjct: 105 GQAEFLLLTELCKGQLVEFLKK---MESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPII 160
Query: 103 HFDIKPHNILLDEDFCPKISDFGLA-KICH--------GRESIVSMTGARGTVG-YIAPE 152
H D+K N+LL K+ DFG A I H R ++V R T Y PE
Sbjct: 161 HRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPE 220
Query: 153 V--FCRNFGEVSYKSDVYSYGMMVF 175
+ NF + K D+++ G +++
Sbjct: 221 IIDLYSNF-PIGEKQDIWALGCILY 244
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE---DFCPKISDFGLAKICHGRESIV 137
+I I ++YLH + I H D+KP N+L + K++DFG AK
Sbjct: 165 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 218
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVF 175
S+T T Y+APEV G Y D++S G++++
Sbjct: 219 SLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 254
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCP--KISDFGLAK--ICHGRESIVSMTGARG 144
G+ Y H ++ H D+K N LLD P KI DFG +K + H + G
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK-----STVG 178
Query: 145 TVGYIAPEVFCRN--FGEVSYKSDVYSYGMMVFEM 177
T YIAPEV + G+V +DV+S G+ ++ M
Sbjct: 179 TPAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVM 210
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 89 GLEYLHRGCNTRILHFDIKPHNILLDEDFCP--KISDFGLAK--ICHGRESIVSMTGARG 144
G+ Y H ++ H D+K N LLD P KI DFG +K + H + G
Sbjct: 126 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK-----STVG 177
Query: 145 TVGYIAPEVFCRN--FGEVSYKSDVYSYGMMVFEM 177
T YIAPEV + G+V +DV+S G+ ++ M
Sbjct: 178 TPAYIAPEVLLKKEYDGKV---ADVWSCGVTLYVM 209
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE---DFCPKISDFGLAKICHGRESIV 137
+I I ++YLH + I H D+KP N+L + K++DFG AK S
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 179
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVF 175
S+T T Y+APEV G Y D++S G++++
Sbjct: 180 SLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 215
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILL--DEDFCP-KISDFGLAKICHGRESIVSMTGA 142
I L Y H + I+H D+KPH +LL E+ P K+ FG+A I G +V+ G
Sbjct: 139 ILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVA-GGR 193
Query: 143 RGTVGYIAPEVFCRN-FGEVSYKSDVYSYGMMVF 175
GT ++APEV R +G+ DV+ G+++F
Sbjct: 194 VGTPHFMAPEVVKREPYGK---PVDVWGCGVILF 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE---DFCPKISDFGLAKICHGRESIV 137
+I I ++YLH + I H D+KP N+L + K++DFG AK S
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 178
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVF 175
S+T T Y+APEV G Y D++S G++++
Sbjct: 179 SLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 214
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLD---EDFCPKISDFGLAKICHGRESIVSMTGA 142
I + Y H + I+H ++KP N+LL + K++DFGLA + E+ G
Sbjct: 137 ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGF 190
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
GT GY++PEV ++ S D+++ G++++
Sbjct: 191 AGTPGYLSPEVLKKD--PYSKPVDIWACGVILY 221
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE---DFCPKISDFGLAKICHGRESIV 137
+I I ++YLH + I H D+KP N+L + K++DFG AK S
Sbjct: 171 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 224
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVF 175
S+T T Y+APEV G Y D++S G++++
Sbjct: 225 SLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 260
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 21/139 (15%)
Query: 42 EGHRRALIYEFVSNGSL-EKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTR 100
EGH LI++ V+ G L E + ++ E + + I + LE +
Sbjct: 82 EGHHY-LIFDLVTGGELFEDIVAREYYSEADA----------SHCIQQILEAVLHCHQMG 130
Query: 101 ILHFDIKPHNILLDEDF---CPKISDFGLAKICHGRESIVSMTGARGTVGYIAPEVFCRN 157
++H ++KP N+LL K++DFGLA G + + G GT GY++PEV ++
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRKD 188
Query: 158 -FGEVSYKSDVYSYGMMVF 175
+G+ D+++ G++++
Sbjct: 189 PYGK---PVDLWACGVILY 204
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE---DFCPKISDFGLAKICHGRESIV 137
+I I ++YLH + I H D+KP N+L + K++DFG AK S
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 174
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVF 175
S+T T Y+APEV G Y D++S G++++
Sbjct: 175 SLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 210
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I ++Y H+ I+H D+K N+LLD D KI+DFG + + + GA
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAP-- 176
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 178
Y APE+F + + DV+S G++++ +
Sbjct: 177 -PYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 207
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE---DFCPKISDFGLAKICHGRESIV 137
+I I ++YLH + I H D+KP N+L + K++DFG AK S
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 180
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVF 175
S+T T Y+APEV G Y D++S G++++
Sbjct: 181 SLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 216
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE---DFCPKISDFGLAKICHGRESIV 137
+I I ++YLH + I H D+KP N+L + K++DFG AK S
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 172
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVF 175
S+T T Y+APEV G Y D++S G++++
Sbjct: 173 SLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 208
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE---DFCPKISDFGLAKICHGRESIV 137
+I I ++YLH + I H D+KP N+L + K++DFG AK S
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 174
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVF 175
S+T T Y+APEV G Y D++S G++++
Sbjct: 175 SLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 210
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE---DFCPKISDFGLAKICHGRESIV 137
+I I ++YLH + I H D+KP N+L + K++DFG AK S
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 173
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVF 175
S+T T Y+APEV G Y D++S G++++
Sbjct: 174 SLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 209
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 90 LEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGTVGYI 149
LE +H I+H D+KP N L+ D K+ DFG+A + V G V Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 150 APEVF-----CRNFG----EVSYKSDVYSYGMMVFEMTGVK----------NNANVAVDR 190
PE R G ++S KSDV+S G +++ MT K + + +D
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP 283
Query: 191 SSEIYFPHWVYKRLE 205
+ EI FP K L+
Sbjct: 284 NHEIEFPDIPEKDLQ 298
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 21/145 (14%)
Query: 51 EFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHFDIKPHN 110
E+ + GSL I E + + + K L + + + RGL Y+H + ++H DIKP N
Sbjct: 87 EYCNGGSLADAISENYRIMS--YFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSN 141
Query: 111 ILLDEDFCPKISD--------------FGLAKICHGRESIVSMTGARGTVGYIAPEVFCR 156
I + P + F + + H I S G ++A EV
Sbjct: 142 IFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR-ISSPQVEEGDSRFLANEVLQE 200
Query: 157 NFGEVSYKSDVYSYGMMVFEMTGVK 181
N+ + K+D+++ + V G +
Sbjct: 201 NYTHLP-KADIFALALTVVXAAGAE 224
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLD---EDFCPKISDFGLAKICHGRESIVSMTGA 142
I + Y H + I+H ++KP N+LL + K++DFGLA + E+ G
Sbjct: 114 ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGF 167
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
GT GY++PEV ++ S D+++ G++++
Sbjct: 168 AGTPGYLSPEVLKKD--PYSKPVDIWACGVILY 198
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE---DFCPKISDFGLAKICHGRESIV 137
+I I ++YLH + I H D+KP N+L + K++DFG AK S
Sbjct: 135 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 188
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVF 175
S+T T Y+APEV G Y D++S G++++
Sbjct: 189 SLTTPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 224
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLD---EDFCPKISDFGLAKICHGRESIVSMTGA 142
I + Y H + I+H ++KP N+LL + K++DFGLA + E+ G
Sbjct: 114 ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGF 167
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
GT GY++PEV ++ S D+++ G++++
Sbjct: 168 AGTPGYLSPEVLKKD--PYSKPVDIWACGVILY 198
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLD---EDFCPKISDFGLAKICHGRESIVSMTGA 142
I + Y H + I+H ++KP N+LL + K++DFGLA + E+ G
Sbjct: 113 ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGF 166
Query: 143 RGTVGYIAPEVFCRNFGEVSYKSDVYSYGMMVF 175
GT GY++PEV ++ S D+++ G++++
Sbjct: 167 AGTPGYLSPEVLKKD--PYSKPVDIWACGVILY 197
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 81 KIAVGIARGLEYLHRGCNTRILHFDIKPHNILLDE---DFCPKISDFGLAKICHGRESIV 137
+I I ++YLH + I H D+KP N+L + K++DFG AK S
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 172
Query: 138 SMTGARGTVGYIAPEVFCRNFGEVSYKS--DVYSYGMMVF 175
S+T T Y+APEV G Y D++S G++++
Sbjct: 173 SLTEPCYTPYYVAPEV----LGPEKYDKSCDMWSLGVIMY 208
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I ++Y H+ I+H D+K N+LLD D KI+DFG + + + GA
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGA--- 175
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEMT 178
Y APE+F + + DV+S G++++ +
Sbjct: 176 PPYAAPELFQGKKYD-GPEVDVWSLGVILYTLV 207
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 20/144 (13%)
Query: 45 RRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVGIARGLEYLHRGCNTRILHF 104
R L++E + GS+ I ++ + ++ +A L++LH I H
Sbjct: 85 RFYLVFEKLQGGSILAHIQKQKHFNEREA------SRVVRDVAAALDFLH---TKGIAHR 135
Query: 105 DIKPHNILLD--EDFCP-KISDFGLA---KICHGRESIVS--MTGARGTVGYIAP---EV 153
D+KP NIL + E P KI DF L K+ + I + +T G+ Y+AP EV
Sbjct: 136 DLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEV 195
Query: 154 FCRNFGEVSYKSDVYSYGMMVFEM 177
F + D++S G++++ M
Sbjct: 196 FTDQATFYDKRCDLWSLGVVLYIM 219
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 14/152 (9%)
Query: 26 RNVAIKVLNETKGFCFEGHRRALIYEFVSNGSLEKFIYEKHPLETNQKLKWEVLYKIAVG 85
++ + V++ + F F H + +E +S +YE Q ++ K A
Sbjct: 155 KDNTMNVIHMLENFTFRNHI-CMTFELLSMN-----LYELIKKNKFQGFSLPLVRKFAHS 208
Query: 86 IARGLEYLHRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKICHGRESIVSMTGARGT 145
I + L+ LH+ RI+H D+KP NILL + I C+ + + + +R
Sbjct: 209 ILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSR-- 263
Query: 146 VGYIAPEVFCRNFGEVSYKSDVYSYGMMVFEM 177
Y APEV D++S G ++ E+
Sbjct: 264 -FYRAPEVILG--ARYGMPIDMWSLGCILAEL 292
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,215,301
Number of Sequences: 62578
Number of extensions: 343057
Number of successful extensions: 2432
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 972
Number of HSP's gapped (non-prelim): 1119
length of query: 291
length of database: 14,973,337
effective HSP length: 98
effective length of query: 193
effective length of database: 8,840,693
effective search space: 1706253749
effective search space used: 1706253749
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)