BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022827
(291 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224069282|ref|XP_002302945.1| predicted protein [Populus trichocarpa]
gi|222844671|gb|EEE82218.1| predicted protein [Populus trichocarpa]
Length = 274
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 191/300 (63%), Positives = 223/300 (74%), Gaps = 37/300 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS-NA 59
MA VDMSLDDIIK K ER RG+GRA RGRGRGRGP S + GRM+GA RRGPLS N
Sbjct: 1 MAATVDMSLDDIIK--KNRERGRGRGRASRGRGRGRGPVRSFNNGRMSGAVRRGPLSVNT 58
Query: 60 RPSSYTIAKSF-------RRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTN 112
PS Y+IAK+ RR R+ PWQHDL EDS+RAAGI+G+EVGTKLYVSNL GVTN
Sbjct: 59 WPSKYSIAKASSKLWMPSRRVRSLPWQHDLLEDSIRAAGITGVEVGTKLYVSNLDYGVTN 118
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
+DIRELF+E+G+LKRYA+H+DK+GR SGSAEV+Y RRSDAFAALK+YNNVLLDGKPMKIE
Sbjct: 119 EDIRELFAEVGDLKRYAVHYDKDGRSSGSAEVMYTRRSDAFAALKKYNNVLLDGKPMKIE 178
Query: 173 VVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGG--LRRS 230
+VG N +P+ AR+NVTG NG++KRTVV T Q RRGG LR
Sbjct: 179 IVGPNPVVPISARMNVTGANGKKKRTVVTT------------------QSRRGGGDLRNG 220
Query: 231 SQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
++ GRGQ GRGR GRG+ GRGRG+GKK PV+KS D+LDKEL++YHAEAMQ
Sbjct: 221 TRN-GRGQAPGRGR------APGRGQAPGRGRGRGKKQPVEKSVDELDKELESYHAEAMQ 273
>gi|356537904|ref|XP_003537446.1| PREDICTED: uncharacterized protein LOC100820344 [Glycine max]
Length = 298
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 193/308 (62%), Positives = 220/308 (71%), Gaps = 28/308 (9%)
Query: 1 MATHVDMSLDDIIKSRKKSERERG----------------QGRARRGRGRGRGPSGSVSG 44
MA+ +DMSLDD IK+R + GR G R +G+ +G
Sbjct: 1 MASSLDMSLDDRIKNRSNNRGRGRGGRGRAHSGRGPSGTLNGRRMVGAVNSRRMAGAGNG 60
Query: 45 GRMTGAARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYV 103
GR TGA RRGPL N RPSSY IAKS RR R FPWQHDLFEDSLRAAGI G+EVGTKLYV
Sbjct: 61 GRTTGAVRRGPLMVNTRPSSYAIAKSIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYV 120
Query: 104 SNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVL 163
SNL GVTN+DIRELFSE+GELKR+A+H+DKNG PSGSAEVVY RRSDAFAALKRYNNVL
Sbjct: 121 SNLDHGVTNEDIRELFSELGELKRFAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVL 180
Query: 164 LDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGR 223
LDGKPMKIE+VG+N+E+P+ ARVNVTGVNGRRKRTVVMTS G AGG A+
Sbjct: 181 LDGKPMKIEIVGSNSELPISARVNVTGVNGRRKRTVVMTSRGGQAGGGPAM--------- 231
Query: 224 RGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDN 283
R + GR G G GRG GG G GRGRG GRG+G+K+ V+KSA++LDKEL+
Sbjct: 232 --PTRGAGWGRRGGPRSGSGRGGAGGRGRGRGRGGAGGRGRGRKDAVEKSAEELDKELET 289
Query: 284 YHAEAMQI 291
YHAEAM I
Sbjct: 290 YHAEAMNI 297
>gi|356569696|ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like [Glycine max]
Length = 298
Score = 306 bits (783), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 190/310 (61%), Positives = 215/310 (69%), Gaps = 32/310 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRM------------- 47
MA+ +DMSLDD IK+R R RG PSG+++GGRM
Sbjct: 1 MASSLDMSLDDRIKNRSNRGRGRGGRGRAHSGRG---PSGALNGGRMAGAVSSRRMAGAS 57
Query: 48 -----TGAARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKL 101
TGA RRGPL N RPSSY IAKS RR R FPWQHDLFEDSLRAAGI G+EVGTKL
Sbjct: 58 NGGRTTGAVRRGPLMVNTRPSSYAIAKSIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKL 117
Query: 102 YVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNN 161
YVSNL GVTN+DIRELFSE+GELKR+A+H+DKNG PSGSAEVVY RRSDAFAALKRYNN
Sbjct: 118 YVSNLDHGVTNEDIRELFSELGELKRFAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNN 177
Query: 162 VLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQ 221
VLLDGKPMKIE+VG+N+E+P+ ARVNVTGVNGRRKRTVVMT G AGG GP
Sbjct: 178 VLLDGKPMKIEIVGSNSELPISARVNVTGVNGRRKRTVVMTPRGGQAGG------GPTMP 231
Query: 222 GRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKEL 281
R RG + G GG G G RG G GRG+G+K+ V+KSA++LDKEL
Sbjct: 232 NR----GAGRGRRGGPRSGSGRGGGGGRGRGRGSRGGGGGRGRGRKDAVEKSAEELDKEL 287
Query: 282 DNYHAEAMQI 291
+ YHAEAM I
Sbjct: 288 ETYHAEAMNI 297
>gi|449456227|ref|XP_004145851.1| PREDICTED: THO complex subunit 4-like [Cucumis sativus]
Length = 286
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/291 (61%), Positives = 215/291 (73%), Gaps = 7/291 (2%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPL-SNA 59
M T +DMSL+D+IK K+ RE+ + R R RGRG G S + G + G+ RRGPL NA
Sbjct: 1 MTTPLDMSLEDVIK---KNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLGINA 57
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
R S+Y+I K R +N WQHDLFEDSLRA+GISGI++GTKLYVSNL GVT +DI+ELF
Sbjct: 58 RASAYSIRKPPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDIKELF 117
Query: 120 SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
SEIG++KR+AIH+DKNGRPSGSAEVVY RRSDAFAALKRYNNVLLDGKPMKIE++G NAE
Sbjct: 118 SEIGDVKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDNAE 177
Query: 180 IPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQG 239
+P+ AR+NVTG NGR +RTVV+TS SG + +N PG RGGL R+++GRGRG
Sbjct: 178 MPVSARINVTGTNGRNRRTVVLTSESGRNATSNVVNSFPGP-SHRGGL-RNARGRGRGAW 235
Query: 240 QGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
GG GGG KK PV+KS+D+LDKEL+NYHAEAMQ
Sbjct: 236 SRGVGLGGGSGGGRGRGRGRGRGQGRKK-PVEKSSDELDKELENYHAEAMQ 285
>gi|255582255|ref|XP_002531919.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223528429|gb|EEF30463.1| RNA and export factor binding protein, putative [Ricinus communis]
Length = 268
Score = 303 bits (775), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 175/291 (60%), Positives = 201/291 (69%), Gaps = 25/291 (8%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS-NA 59
M+T VDMSLDDIIK ++ R R GS SGGRMTGA R+GPLS NA
Sbjct: 1 MSTSVDMSLDDIIKKNRERGRGGRGRARRGRGR-----GGSFSGGRMTGAGRKGPLSVNA 55
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
RPS ++IAK RR RN PWQHDL EDS+RAAGI+G+EVGTKLYVSNL GV+N+DIRELF
Sbjct: 56 RPSQFSIAKPNRRIRNLPWQHDLLEDSIRAAGITGVEVGTKLYVSNLEYGVSNEDIRELF 115
Query: 120 SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
+EIG+LKRYA+H+DKNGR +GSAEVVY RRS+AFAALK+YNNVLLDGKPMKIE+VG E
Sbjct: 116 AEIGDLKRYAVHYDKNGRSTGSAEVVYTRRSEAFAALKKYNNVLLDGKPMKIEIVGVTGE 175
Query: 180 IPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQG 239
P+ ARVNVTG+NGRRKRTVVMT G G G A NRG G + R G
Sbjct: 176 APISARVNVTGINGRRKRTVVMTPGPGRGRGFAPSNRGAGQRSRGGLRNLGRGRGRGRGR 235
Query: 240 QGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
G G+GKK P++KSAD+LDKELD YHAEAMQ
Sbjct: 236 GG-------------------HGGRGKKQPLEKSADELDKELDTYHAEAMQ 267
>gi|225453197|ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
gi|296087136|emb|CBI33510.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 296 bits (757), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 190/293 (64%), Positives = 222/293 (75%), Gaps = 28/293 (9%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAA-RRGPL-SN 58
MAT +DMSLDDIIK R SER RG+GRARRGRG GS +GGRM+G RRGPL N
Sbjct: 1 MATSLDMSLDDIIK-RSNSERVRGRGRARRGRGPI---GGSFNGGRMSGIPPRRGPLRVN 56
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
ARPSSY IAKS RRT+ PWQHDLFEDSLRAAG+ G+E GTKLY+SNL GVTN+DIREL
Sbjct: 57 ARPSSYAIAKSSRRTK-IPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIREL 115
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
FSEIG++KRYA+H++KNGRPSGSAEVVY RRSDAFAA+KRYNNVLLDGKPMKIE++G+++
Sbjct: 116 FSEIGDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEIIGSDS 175
Query: 179 EIPLQARVNVT-GVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRG 237
++P+ ARVNV GVNG+R+RTVVMT G G+A G+ AIN R
Sbjct: 176 DMPVSARVNVIGGVNGKRRRTVVMTPGVGHARGSTAIN--------------------RS 215
Query: 238 QGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
+ G G G GR RGRGRG+G+K PV+KSA +LDKELDNYHAEAM
Sbjct: 216 SSRRGRGGLSNGRGRGRAGSRGRGRGRGRKQPVEKSAVELDKELDNYHAEAMH 268
>gi|147860765|emb|CAN80452.1| hypothetical protein VITISV_029873 [Vitis vinifera]
Length = 348
Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 195/322 (60%), Positives = 231/322 (71%), Gaps = 48/322 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAA-RRGPLSNA 59
MAT +DMSLDDIIK R SER RG+GRARRGRG GS +GGRM+G RRGPL
Sbjct: 42 MATSLDMSLDDIIK-RSNSERVRGRGRARRGRGPI---GGSFNGGRMSGIPPRRGPL--- 94
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+S RRT+ PWQHDLFEDSLRAAG+ G+E GTKLY+SNL GVTN+DIRELF
Sbjct: 95 --------RSSRRTK-IPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIRELF 145
Query: 120 SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
SEIG++KRYA+H++KNGRPSGSAEVVY RRSDAFAA+KRYNNVLLDGKPMKIE++G++++
Sbjct: 146 SEIGDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEIIGSDSD 205
Query: 180 IPLQARVNVT-GVNGRRKRTVVMTSGSGNAGGAAAINRGP--------GSQG-------- 222
+P+ ARVNV GVNG+R+RTVVMT G G+A G+ AINR SQG
Sbjct: 206 MPVSARVNVIGGVNGKRRRTVVMTPGVGHARGSTAINRSSREACGNLKVSQGLAWVHVIS 265
Query: 223 ----------RRGGLRRSSQGRGRG-QGQGRGRGRGG---GGGGGRGRGRGRGRGQGKKN 268
+ GGLRR ++G G G + RGRGG G G GR RGRGRG+G+K
Sbjct: 266 STLEDKGRNLKEGGLRRGAEGVGCGRRPMASRRGRGGLSNGRGRGRAGSRGRGRGRGRKQ 325
Query: 269 PVDKSADDLDKELDNYHAEAMQ 290
PV+KSA +LDKELDNYHAEAM
Sbjct: 326 PVEKSAVELDKELDNYHAEAMH 347
>gi|224077330|ref|XP_002305214.1| predicted protein [Populus trichocarpa]
gi|222848178|gb|EEE85725.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/298 (57%), Positives = 205/298 (68%), Gaps = 43/298 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS-NA 59
MAT VDMSLDDIIK ++ R RG+ R RG GR + GRM+GA RRGPLS NA
Sbjct: 1 MATTVDMSLDDIIKKNRERGRGRGRASRGRDRGPGRF----FNNGRMSGAVRRGPLSVNA 56
Query: 60 RPSSYTIAKSF-------RRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTN 112
RP Y+IAK+ RR R+ PWQHDL EDS+RAAGI+G+EVGTKLYVSNL GVTN
Sbjct: 57 RPPKYSIAKASSKLWMPSRRIRSLPWQHDLLEDSIRAAGITGLEVGTKLYVSNLDYGVTN 116
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
+DIRELF+EIG+LKR+A+H+DKNGR +GSAEV+Y RRSDAF+ALK+YNNVLLDG+PMKIE
Sbjct: 117 EDIRELFAEIGDLKRFAVHYDKNGRSTGSAEVMYTRRSDAFSALKKYNNVLLDGRPMKIE 176
Query: 173 VVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQ 232
+VG N E+P+ ARVNVTG NG++KRTVVM S+
Sbjct: 177 IVGANPEVPISARVNVTGANGKKKRTVVMI---------------------------QSR 209
Query: 233 GRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
G G G GRG G G+GRGRGRG+ Q + VD DLDKEL++YHAEAMQ
Sbjct: 210 RGGGGPRNGMRNGRGRGRAQGQGRGRGRGKKQPAEKSVD----DLDKELESYHAEAMQ 263
>gi|357460875|ref|XP_003600719.1| THO complex subunit [Medicago truncatula]
gi|355489767|gb|AES70970.1| THO complex subunit [Medicago truncatula]
Length = 291
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 207/305 (67%), Gaps = 30/305 (9%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRA----RRGRGRGRGPSGSVSGGRM-----TGAA 51
MA+ +D+SLDD IKSR R RG+G+A G G +G+V+G R TGA
Sbjct: 1 MASSLDISLDDRIKSRSNRGRGRGRGKALSGRGSGTLGGGRRTGAVNGRRTSNGGRTGAV 60
Query: 52 RRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGV 110
RRGPL+ N R SSY IAKS RR + WQ DLFEDSLRAAGI G+E TKLYVSNL GV
Sbjct: 61 RRGPLNVNTRASSYAIAKSIRRPKTLAWQSDLFEDSLRAAGIQGVEADTKLYVSNLDRGV 120
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMK 170
TN+DIRELFSE+GELKRYA+H+DKNG P+GSAEVVY RRSDAFAALKRYNNVLLDGKPMK
Sbjct: 121 TNEDIRELFSELGELKRYAVHYDKNGHPTGSAEVVYNRRSDAFAALKRYNNVLLDGKPMK 180
Query: 171 IEVVGTNAEIPLQARV-----NVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRG 225
IE+VGTN+ +P+ ARV NV+ +NG+RKRTVVMT G GG A +N
Sbjct: 181 IEIVGTNSALPVTARVNVSSMNVSAMNGQRKRTVVMTPRGGRGGGPAMLN---------- 230
Query: 226 GLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYH 285
+G RG G G GRG GRG+G+K+ V+KSA+ LDKEL+ YH
Sbjct: 231 -----RGAGWGRRGGSRGGSGSMRGRGRGRPGRGGGRGRGRKDGVEKSAEQLDKELETYH 285
Query: 286 AEAMQ 290
AEAMQ
Sbjct: 286 AEAMQ 290
>gi|449532026|ref|XP_004172985.1| PREDICTED: THO complex subunit 4-like, partial [Cucumis sativus]
Length = 368
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/205 (67%), Positives = 167/205 (81%), Gaps = 8/205 (3%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGR--MTGAARRGPL-S 57
M T +DMSL+D+IK K+ RE+ + R R RGRG GS +GGR + G+ RRGPL
Sbjct: 1 MTTPLDMSLEDVIK---KNNREKLRARGRARRGRGA--GGSFNGGRGVVIGSVRRGPLGI 55
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
NAR S+Y+I K R +N WQHDLFEDSLRA+GISGI++GTKLYVSNL GVT +DI+E
Sbjct: 56 NARASAYSIRKPPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDIKE 115
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LFSEIG++KR+AIH+DKNGRPSGSAEVVY RRSDAFAALKRYNNVLLDGKPMKIE++G N
Sbjct: 116 LFSEIGDVKRFAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEMLGDN 175
Query: 178 AEIPLQARVNVTGVNGRRKRTVVMT 202
AE+P+ AR+NVTG NGR +RTVV+T
Sbjct: 176 AEMPVSARINVTGTNGRNRRTVVLT 200
>gi|242081501|ref|XP_002445519.1| hypothetical protein SORBIDRAFT_07g020860 [Sorghum bicolor]
gi|241941869|gb|EES15014.1| hypothetical protein SORBIDRAFT_07g020860 [Sorghum bicolor]
Length = 272
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/248 (56%), Positives = 180/248 (72%), Gaps = 13/248 (5%)
Query: 48 TGAARRGPL-SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNL 106
+G RGPL N+RPS+ TIAKSF RT++ W+ DLF DS+ A SGIE GTKLY+SNL
Sbjct: 31 SGLPPRGPLGVNSRPSARTIAKSFSRTKDMTWRPDLFSDSMAA---SGIETGTKLYISNL 87
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG 166
GV+N+DI+ELFSE+G LKR+A+H+D GRP+G+AEVV+ RRSDA AALKRYNNVLLDG
Sbjct: 88 DYGVSNEDIKELFSEVGHLKRFAVHYDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDG 147
Query: 167 KPMKIEVVGTNAEIPLQARVNVTGV-NGRRKRTVVMT---SGSGNAGGAAAINRGPGSQG 222
K MKIEV+G++ +P+ R+NV G NGR RTVVMT S G + ++
Sbjct: 148 KAMKIEVIGSDLGLPMTPRINVVGASNGRATRTVVMTPEFSQRGRGSSSRPLSNPSNRFN 207
Query: 223 RRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELD 282
RGG + GRGRGQ Q RGRGRG GRGRG+ +GRG+G+K +K+AD+LDK+L+
Sbjct: 208 NRGGFQ---AGRGRGQFQARGRGRGQFQSRGRGRGQFQGRGRGRK--PEKTADELDKDLE 262
Query: 283 NYHAEAMQ 290
+YHAEAM+
Sbjct: 263 SYHAEAMK 270
>gi|94466659|emb|CAJ44458.1| ALY protein [Nicotiana benthamiana]
Length = 275
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 171/293 (58%), Positives = 198/293 (67%), Gaps = 29/293 (9%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPL-SNARPSS 63
+DM+LDD+IKSR+ + Q R RG GS GGR TGA R+ PL NARPS+
Sbjct: 4 LDMTLDDMIKSRRNT-----QRGGRGQGRARRGRGGSFRGGRTTGAPRKVPLGVNARPSA 58
Query: 64 YTIAKSFRRTRNFPWQHD--LFEDSLRAAGI-SGIEVGTKLYVSNLHPGVTNDDIRELFS 120
IAKSFRRT+N PWQ+ LFEDSLRAAGI SG+E GTK+YVSNL GVTN DIRELFS
Sbjct: 59 TRIAKSFRRTKNLPWQNGNGLFEDSLRAAGIPSGLESGTKVYVSNLDVGVTNSDIRELFS 118
Query: 121 EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI 180
EIGEL RYAIH+DKNGRPSG+AEVV+ARRSDA+ ALKRYNNV LDGKPMKIEVV ++
Sbjct: 119 EIGELIRYAIHYDKNGRPSGAAEVVFARRSDAYQALKRYNNVQLDGKPMKIEVVAPPTDM 178
Query: 181 PLQARVNVTGVNGRRKRTVVMTSGSGNA-GGAAAINRGPGSQGRRGGLRRSSQGRGRGQG 239
PL ARV+V NGR RTVVM GS G A+A NRG SSQ RG+G
Sbjct: 179 PLSARVDVGRGNGR--RTVVMMPGSARGRGSASAANRG------------SSQ---RGRG 221
Query: 240 QGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYH--AEAMQ 290
G G G G+G+KN V+KSA++LDKEL+NY A+AMQ
Sbjct: 222 GFGTTSGRGRSRGRGGGRGRGRGGRGRKNGVEKSAEELDKELENYRATADAMQ 274
>gi|413922292|gb|AFW62224.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
gi|413922293|gb|AFW62225.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
Length = 272
Score = 249 bits (636), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 140/248 (56%), Positives = 178/248 (71%), Gaps = 13/248 (5%)
Query: 48 TGAARRGPL-SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNL 106
+G A RGPL N+RPS+ TIAKSF RT++ W+ DLF DS+ A SGIE GTKLY+SNL
Sbjct: 31 SGLAPRGPLGVNSRPSARTIAKSFSRTKDMTWRPDLFSDSMAA---SGIETGTKLYISNL 87
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG 166
GV+N+DI+ELFSE+G LKR+A+H+D GRP+G+AEVV+ RRSDA AALKRYNNVLLDG
Sbjct: 88 DYGVSNEDIKELFSEVGHLKRFAVHYDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDG 147
Query: 167 KPMKIEVVGTNAEIPLQARVNVTGV-NGRRKRTVVMT---SGSGNAGGAAAINRGPGSQG 222
K MKIEV+G + +P+ R+NV G NGR RTVVMT S G + ++
Sbjct: 148 KAMKIEVIGNDLGLPMTPRINVVGASNGRATRTVVMTPEFSQRGRGSSSRPLSNPSNRFN 207
Query: 223 RRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELD 282
RGG + GRGRGQ Q GRGRG GRGR + +GRG+G+K +K+AD+LDK+L+
Sbjct: 208 NRGGFQ---AGRGRGQFQSWGRGRGQFQSRGRGRAQFQGRGRGRK--PEKTADELDKDLE 262
Query: 283 NYHAEAMQ 290
+YHAEAM+
Sbjct: 263 SYHAEAMK 270
>gi|226531320|ref|NP_001146561.1| hypothetical protein [Zea mays]
gi|219887809|gb|ACL54279.1| unknown [Zea mays]
gi|413922291|gb|AFW62223.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
Length = 269
Score = 249 bits (636), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 139/245 (56%), Positives = 176/245 (71%), Gaps = 10/245 (4%)
Query: 48 TGAARRGPL-SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNL 106
+G A RGPL N+RPS+ TIAKSF RT++ W+ DLF DS+ A SGIE GTKLY+SNL
Sbjct: 31 SGLAPRGPLGVNSRPSARTIAKSFSRTKDMTWRPDLFSDSMAA---SGIETGTKLYISNL 87
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG 166
GV+N+DI+ELFSE+G LKR+A+H+D GRP+G+AEVV+ RRSDA AALKRYNNVLLDG
Sbjct: 88 DYGVSNEDIKELFSEVGHLKRFAVHYDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDG 147
Query: 167 KPMKIEVVGTNAEIPLQARVNVTGV-NGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRG 225
K MKIEV+G + +P+ R+NV G NGR RTVVMT G ++ RG
Sbjct: 148 KAMKIEVIGNDLGLPMTPRINVVGASNGRATRTVVMTPEFSQRGRGSSSRPLSNRFNNRG 207
Query: 226 GLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYH 285
G + GRGRGQ Q GRGRG GRGR + +GRG+G+K +K+AD+LDK+L++YH
Sbjct: 208 GFQ---AGRGRGQFQSWGRGRGQFQSRGRGRAQFQGRGRGRKP--EKTADELDKDLESYH 262
Query: 286 AEAMQ 290
AEAM+
Sbjct: 263 AEAMK 267
>gi|357460877|ref|XP_003600720.1| THO complex subunit [Medicago truncatula]
gi|355489768|gb|AES70971.1| THO complex subunit [Medicago truncatula]
Length = 218
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/227 (60%), Positives = 160/227 (70%), Gaps = 20/227 (8%)
Query: 69 SFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
S RR + WQ DLFEDSLRAAGI G+E TKLYVSNL GVTN+DIRELFSE+GELKRY
Sbjct: 6 SIRRPKTLAWQSDLFEDSLRAAGIQGVEADTKLYVSNLDRGVTNEDIRELFSELGELKRY 65
Query: 129 AIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARV-- 186
A+H+DKNG P+GSAEVVY RRSDAFAALKRYNNVLLDGKPMKIE+VGTN+ +P+ ARV
Sbjct: 66 AVHYDKNGHPTGSAEVVYNRRSDAFAALKRYNNVLLDGKPMKIEIVGTNSALPVTARVNV 125
Query: 187 ---NVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGRG 243
NV+ +NG+RKRTVVMT G GG A +N +G RG
Sbjct: 126 SSMNVSAMNGQRKRTVVMTPRGGRGGGPAMLN---------------RGAGWGRRGGSRG 170
Query: 244 RGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
G G GRG GRG+G+K+ V+KSA+ LDKEL+ YHAEAMQ
Sbjct: 171 GSGSMRGRGRGRPGRGGGRGRGRKDGVEKSAEQLDKELETYHAEAMQ 217
>gi|9663023|emb|CAC01083.1| DIP1 protein [Arabidopsis thaliana]
Length = 295
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/301 (51%), Positives = 199/301 (66%), Gaps = 17/301 (5%)
Query: 1 MATHVDMSLDDIIKSRKKSERER-----GQGRARR-GRGRGRGPSGSVSGGRMTGAARRG 54
M+ ++M+LD+I+K + KSER G+G +R+ GRGRG G R
Sbjct: 1 MSDALNMTLDEIVK-KSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGRGGGPVRRGP 59
Query: 55 PLSNARPSS-YTIAKSFRRTRNFPWQH--DLFEDSLRAAGISGIEVGTKLYVSNLHPGVT 111
N RPSS ++I K RR R+ PWQ+ DL+E++LRA G+SG+EVGT +Y++NL GVT
Sbjct: 60 LAVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVT 119
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
N+DIREL++EIGELKRYAIH+DKNGRPSGSAEVVY RRSDA A+++YNNVLLDG+PMK+
Sbjct: 120 NEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKL 179
Query: 172 EVVGTNAE-IPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRS 230
E++G N E P+ ARVNVTG+NGR KR+V + G RG G GR L+ S
Sbjct: 180 EILGGNTESAPVAARVNVTGLNGRMKRSVFIGQGVRGGRVGRG--RGSGPSGRHLPLQHS 237
Query: 231 SQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
QG G G GGG + GRG GKK PV+KSA DLDK+L++YHAEAM
Sbjct: 238 HQGGVTAGRGGFRGIGRGNGGGIGNKSGGRG---GKK-PVEKSAADLDKDLESYHAEAMN 293
Query: 291 I 291
I
Sbjct: 294 I 294
>gi|18408471|ref|NP_564871.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|334183676|ref|NP_001185329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15294238|gb|AAK95296.1|AF410310_1 At1g66260/T6J19_1 [Arabidopsis thaliana]
gi|23506135|gb|AAN31079.1| At1g66260/T6J19_1 [Arabidopsis thaliana]
gi|332196365|gb|AEE34486.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332196366|gb|AEE34487.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 295
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/307 (48%), Positives = 195/307 (63%), Gaps = 29/307 (9%)
Query: 1 MATHVDMSLDDIIKSRKKSERER-----GQGRARR-GRGRGRGPSGSVSGGRMTGAARRG 54
M+ ++M+LD+I+K + KSER G+G +R+ GRGRG G R
Sbjct: 1 MSDALNMTLDEIVK-KSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGRGGGPVRRGP 59
Query: 55 PLSNARPSS-YTIAKSFRRTRNFPWQH--DLFEDSLRAAGISGIEVGTKLYVSNLHPGVT 111
N RPSS ++I K RR R+ PWQ+ DL+E++LRA G+SG+EVGT +Y++NL GVT
Sbjct: 60 LAVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVT 119
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
N+DIREL++EIGELKRYAIH+DKNGRPSGSAEVVY RRSDA A+++YNNVLLDG+PMK+
Sbjct: 120 NEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKL 179
Query: 172 EVVGTNAE-IPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRG------PGSQGRR 224
E++G N E P+ ARVNVTG+NGR KR+V + G G P Q ++
Sbjct: 180 EILGGNTESAPVAARVNVTGLNGRMKRSVFIGQGVRGGRVGRGRGSGPSGRRLPLQQNQQ 239
Query: 225 GGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
GG+ G G G G G + G+G K PV+KSA DLDK+L++Y
Sbjct: 240 GGV------------TAGRGGFRGRGRGNGGGRGNKSGGRGGKKPVEKSAADLDKDLESY 287
Query: 285 HAEAMQI 291
HAEAM I
Sbjct: 288 HAEAMNI 294
>gi|413922288|gb|AFW62220.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
Length = 226
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/231 (54%), Positives = 164/231 (70%), Gaps = 12/231 (5%)
Query: 64 YTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIG 123
+ I +SF RT++ W+ DLF DS+ A SGIE GTKLY+SNL GV+N+DI+ELFSE+G
Sbjct: 2 FGIFQSFSRTKDMTWRPDLFSDSMAA---SGIETGTKLYISNLDYGVSNEDIKELFSEVG 58
Query: 124 ELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQ 183
LKR+A+H+D GRP+G+AEVV+ RRSDA AALKRYNNVLLDGK MKIEV+G + +P+
Sbjct: 59 HLKRFAVHYDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEVIGNDLGLPMT 118
Query: 184 ARVNVTGV-NGRRKRTVVMT---SGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQG 239
R+NV G NGR RTVVMT S G + ++ RGG + GRGRGQ
Sbjct: 119 PRINVVGASNGRATRTVVMTPEFSQRGRGSSSRPLSNPSNRFNNRGGFQ---AGRGRGQF 175
Query: 240 QGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
Q GRGRG GRGR + +GRG+G+K +K+AD+LDK+L++YHAEAM+
Sbjct: 176 QSWGRGRGQFQSRGRGRAQFQGRGRGRK--PEKTADELDKDLESYHAEAMK 224
>gi|145334661|ref|NP_001078676.1| THO complex subunit 4 [Arabidopsis thaliana]
gi|332006840|gb|AED94223.1| THO complex subunit 4 [Arabidopsis thaliana]
Length = 280
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/236 (57%), Positives = 162/236 (68%), Gaps = 14/236 (5%)
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
NARPSS+TI K RR R+ PWQ LFED LRAAG SG+EVGT+L+V+NL GVTN+DIRE
Sbjct: 52 NARPSSFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRE 111
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LFSEIGE++RYAIH+DKNGRPSG+AEVVY RRSDAF ALK+YNNVLLDG+PM++E++G N
Sbjct: 112 LFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGN 171
Query: 178 --AEIPLQAR--VNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQG 233
+E PL R VNVTG+NGR KRTVV+ G G A RR
Sbjct: 172 NSSEAPLSGRVNVNVTGLNGRLKRTVVIQVRGGRGGRGPAPTVS----------RRLPIH 221
Query: 234 RGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAM 289
+G G GRG G G G G K PV+KSA DLDK+L++YHA+AM
Sbjct: 222 NQQGGGMRGGRGGFRARGRGNGGRGRGGGRGNGKKPVEKSAADLDKDLESYHADAM 277
>gi|297805348|ref|XP_002870558.1| hypothetical protein ARALYDRAFT_493750 [Arabidopsis lyrata subsp.
lyrata]
gi|297316394|gb|EFH46817.1| hypothetical protein ARALYDRAFT_493750 [Arabidopsis lyrata subsp.
lyrata]
Length = 279
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 134/235 (57%), Positives = 162/235 (68%), Gaps = 14/235 (5%)
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
NARPSS +I K RR R+ PWQ LFED LRAAG+SG+EVGT+L+V+NL GVTN+DIRE
Sbjct: 53 NARPSSLSINKPVRRVRSLPWQSGLFEDGLRAAGVSGVEVGTRLHVTNLDQGVTNEDIRE 112
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV-GT 176
LFSEIGE++RYAIH+DKNGRPSG+AEVVY RRSDAF ALK+YNNVLLDG+PM++E++ G
Sbjct: 113 LFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGN 172
Query: 177 NAEIPLQAR--VNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGR 234
N+E PL R VNVTG+NGR KRTVV+ G G A + R
Sbjct: 173 NSEAPLSGRVNVNVTGLNGRLKRTVVIQVRGGRGGRGPA-----------PTISRRLPIH 221
Query: 235 GRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAM 289
+ G GRG G G G G G K PV+KSA DLDK+L++YHA+AM
Sbjct: 222 NQQGGMRGGRGGFRGRGRGGGGRGRGGGRGNGKKPVEKSAADLDKDLESYHADAM 276
>gi|30693141|ref|NP_198588.2| THO complex subunit 4 [Arabidopsis thaliana]
gi|37201990|gb|AAQ89610.1| At5g37720 [Arabidopsis thaliana]
gi|110735849|dbj|BAE99901.1| hypothetical protein [Arabidopsis thaliana]
gi|332006839|gb|AED94222.1| THO complex subunit 4 [Arabidopsis thaliana]
Length = 288
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/236 (58%), Positives = 164/236 (69%), Gaps = 6/236 (2%)
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
NARPSS+TI K RR R+ PWQ LFED LRAAG SG+EVGT+L+V+NL GVTN+DIRE
Sbjct: 52 NARPSSFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRE 111
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LFSEIGE++RYAIH+DKNGRPSG+AEVVY RRSDAF ALK+YNNVLLDG+PM++E++G N
Sbjct: 112 LFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGN 171
Query: 178 --AEIPLQAR--VNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQG 233
+E PL R VNVTG+NGR KRTVV+ G G G G G RR
Sbjct: 172 NSSEAPLSGRVNVNVTGLNGRLKRTVVIQQGGGGRGRVRGGRGGRGPAPTVS--RRLPIH 229
Query: 234 RGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAM 289
+G G GRG G G G G K PV+KSA DLDK+L++YHA+AM
Sbjct: 230 NQQGGGMRGGRGGFRARGRGNGGRGRGGGRGNGKKPVEKSAADLDKDLESYHADAM 285
>gi|297841223|ref|XP_002888493.1| hypothetical protein ARALYDRAFT_475731 [Arabidopsis lyrata subsp.
lyrata]
gi|297334334|gb|EFH64752.1| hypothetical protein ARALYDRAFT_475731 [Arabidopsis lyrata subsp.
lyrata]
Length = 293
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/244 (51%), Positives = 161/244 (65%), Gaps = 23/244 (9%)
Query: 58 NARPSS-YTIAKSFRRTRNFPWQH--DLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
NARPSS ++I K RR R+ PWQ+ DL E+SLRA G+SG+EVGT +Y++NL GVTN+D
Sbjct: 62 NARPSSSFSINKLARRKRSLPWQNQNDLLEESLRAVGVSGVEVGTTVYITNLDQGVTNED 121
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
IREL++EIGELKRYAIH+DKNGRPSGSAEVVY RRSDA A+++YNNVLLDG+PM++E++
Sbjct: 122 IRELYTEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDALQAMRKYNNVLLDGRPMRLEIL 181
Query: 175 GTNAE-IPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRG------PGSQGRRGGL 227
G +AE P+ ARVNVTG+NGR KR+V + G G P Q ++G +
Sbjct: 182 GGSAEAAPVAARVNVTGLNGRMKRSVFIGQGIRGGRVGRGRGSGPSGRHLPIQQNQQGVV 241
Query: 228 RRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAE 287
+ G G G GG K V+KSA DLDK+L++YHAE
Sbjct: 242 KGGRGGFRGRGRGNTGGRGNKSGRGG-------------KKAVEKSAADLDKDLESYHAE 288
Query: 288 AMQI 291
AM I
Sbjct: 289 AMNI 292
>gi|9663025|emb|CAC01084.1| DIP2 protein [Arabidopsis thaliana]
Length = 288
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/236 (58%), Positives = 166/236 (70%), Gaps = 6/236 (2%)
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
NARPSS+TI K RR R+ PWQ LFED LRAAG SG+EVGT+L+V+NL GVTN+DIRE
Sbjct: 52 NARPSSFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRE 111
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LFSEIGE++RYAIH+DKNGRPSG+AEVVY RRSDAF ALK+YNNVLLDG+PM++E++G N
Sbjct: 112 LFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGN 171
Query: 178 --AEIPLQAR--VNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQG 233
+E PL R VNVTG+NGR KRTVV+ G G G LR
Sbjct: 172 NSSEAPLSGRVNVNVTGLNGRLKRTVVIQQGGGGIGRVRGGRGE-RGPAPTVSLRLPIHN 230
Query: 234 RGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAM 289
+ G +G G G G RGRG GRG G K PV+KSA DL K+L++YHA+AM
Sbjct: 231 QQGGGMRGGRGGFRARGRGNGDRGRGGGRGNGNK-PVEKSAADLAKDLESYHADAM 285
>gi|115476498|ref|NP_001061845.1| Os08g0427900 [Oryza sativa Japonica Group]
gi|38175495|dbj|BAD01191.1| putative transcriptional coactivator(DIP2) [Oryza sativa Japonica
Group]
gi|38175772|dbj|BAD01466.1| putative transcriptional coactivator(DIP2) [Oryza sativa Japonica
Group]
gi|113623814|dbj|BAF23759.1| Os08g0427900 [Oryza sativa Japonica Group]
Length = 286
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/260 (52%), Positives = 172/260 (66%), Gaps = 31/260 (11%)
Query: 48 TGAARRGPL---SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVS 104
+G RGPL N+RPS+ TIAKSF RT++ W+ DLF DS+ A SGIE GTKLY+S
Sbjct: 39 SGMPPRGPLGLGVNSRPSARTIAKSFSRTKDMTWRPDLFSDSMAA---SGIETGTKLYIS 95
Query: 105 NLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLL 164
NL GV+N+DI+ELFSE+G LKR+A+HFD GRP+G+AEVV+ RRSDA AALKRYNNVLL
Sbjct: 96 NLDYGVSNEDIKELFSEVGHLKRFAVHFDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLL 155
Query: 165 DGKPMKIEVVGTNAEIPLQARVNVTGV-NGRRKRTVVMTSGSGNAGGAAAINRGPGSQGR 223
DGK MKIEV+G++ +P+ R+NV G NGR RTVVMT G RG GS R
Sbjct: 156 DGKAMKIEVIGSDLGLPMTPRINVVGASNGRPTRTVVMTPEIG--------QRGSGSSSR 207
Query: 224 RGGLRRSSQGRGRGQG-------------QGRGRGRGGGGGGGRGRGRGRGRGQGKKNPV 270
G + RG Q Q + +GRG G GRG+ +GRGRG+ +
Sbjct: 208 PTGPTVNRYNRGAFQAGRGRGRGRGRAPFQSQFQGRGTGSVRGRGQFQGRGRGRRQAG-- 265
Query: 271 DKSADDLDKELDNYHAEAMQ 290
K+AD+LDK+L+ YHAEAM+
Sbjct: 266 -KTADELDKDLETYHAEAMK 284
>gi|12323574|gb|AAG51767.1|AC066691_7 RNA and export factor binding protein, putative; 38196-36208
[Arabidopsis thaliana]
Length = 282
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/300 (47%), Positives = 184/300 (61%), Gaps = 28/300 (9%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ ++M+LD+I+K KS+ ER G+G R SG GG R
Sbjct: 1 MSDALNMTLDEIVK---KSKSERSAAARSGGKGVSR-KSGRGRGGPNGVVGGGRGGGPVR 56
Query: 61 PSSYTIAKSFRRTRNFPWQH--DLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
+A RR R+ PWQ+ DL+E++LRA G+SG+EVGT +Y++NL GVTN+DIREL
Sbjct: 57 RGPLALA---RRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVTNEDIREL 113
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
++EIGELKRYAIH+DKNGRPSGSAEVVY RRSDA A+++YNNVLLDG+PMK+E++G N
Sbjct: 114 YAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLEILGGNT 173
Query: 179 E-IPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRG------PGSQGRRGGLRRSS 231
E P+ ARVNVTG+NGR KR+V + G G P Q ++GG+
Sbjct: 174 ESAPVAARVNVTGLNGRMKRSVFIGQGVRGGRVGRGRGSGPSGRRLPLQQNQQGGV---- 229
Query: 232 QGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQI 291
G G G G G + G+G K PV+KSA DLDK+L++YHAEAM I
Sbjct: 230 --------TAGRGGFRGRGRGNGGGRGNKSGGRGGKKPVEKSAADLDKDLESYHAEAMNI 281
>gi|294464863|gb|ADE77937.1| unknown [Picea sitchensis]
Length = 274
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/294 (48%), Positives = 182/294 (61%), Gaps = 26/294 (8%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRG--PLSN 58
MA +DMSL+D+IK+ K+ RG+G +R G G G + SN
Sbjct: 1 MANSLDMSLEDLIKNNKQFSGGRGRGGSRGRGRGGGRGGSRGGDGVGRGRRGQQLRVNSN 60
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGIS-GIEVGTKLYVSNLHPGVTNDDIRE 117
ARPS Y+IAKSF R + WQHD+FEDS+ A G+ G+E GTKLYVSNL GV+N DI+E
Sbjct: 61 ARPSPYSIAKSFNRAKGVVWQHDMFEDSMAAIGMPIGLETGTKLYVSNLDSGVSNQDIKE 120
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LF+E+G+LK A+H+D++GR +G+AEVV+ ++ DA AA+KRYNNV LDGKPMKIE+VGT
Sbjct: 121 LFTEVGDLKSCALHYDRSGRSNGTAEVVFVKKVDAVAAVKRYNNVQLDGKPMKIELVGTG 180
Query: 178 AEIPLQARVNVTGVN-GRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGR 236
+PL ARVNVTG + GR +RTVVMT G A A++
Sbjct: 181 LSLPLSARVNVTGTSAGRGRRTVVMTPGFTRAAADASME--------------------- 219
Query: 237 GQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
Q G G G GRGRG RG+G+ DKSA +LDKEL+NYH EAMQ
Sbjct: 220 -QRGGNGNWNRRRGRRSNGRGRGGRRGRGRSQVPDKSAAELDKELENYHTEAMQ 272
>gi|242095380|ref|XP_002438180.1| hypothetical protein SORBIDRAFT_10g009240 [Sorghum bicolor]
gi|241916403|gb|EER89547.1| hypothetical protein SORBIDRAFT_10g009240 [Sorghum bicolor]
Length = 307
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 152/311 (48%), Positives = 191/311 (61%), Gaps = 25/311 (8%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRAR----------RGRGRGRGPSGSVSGGRMTGA 50
MAT +D+ LDD+IKSR R RG+G+ RG RGRG +G+ G R G
Sbjct: 1 MATSLDVPLDDLIKSRNGRGRGRGRGQGGRGRGDGQRLARGSWRGRG-TGTFRG-RGLGV 58
Query: 51 ARRGPL-SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPG 109
R PL N R SS+ IAKSF + ++F W+HDLFEDS+ AAG+SGIE GTKLY+SNLH G
Sbjct: 59 PSRRPLGVNTRSSSFAIAKSFNKAKDFVWRHDLFEDSMVAAGLSGIESGTKLYISNLHYG 118
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPM 169
VT +DI+ELFSE+G LK A+H+D P+GSAEV++ RRS+A AALKRYNNV LDGK M
Sbjct: 119 VTREDIQELFSEMGHLKHCAVHYDSYRHPTGSAEVIFTRRSEALAALKRYNNVRLDGKAM 178
Query: 170 KIEVVGTNAEIPLQA--RVNVT-GVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQ---GR 223
KIEV+G + + A R++V G +GR +R VVM G G A+ GP S +
Sbjct: 179 KIEVIGADLGLSSAAAPRISVVPGASGRGQREVVMMPGGSGFGLGAS---GPSSSLPGWK 235
Query: 224 RGGL--RRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKEL 281
RGG R G Q G G G G+ RGRG +K V+KSA+ LDK+L
Sbjct: 236 RGGFVQRGGQGRGGFAQRGRGQVRGRGRGRGRSSFGQVRGRGYVRKGNVEKSAEQLDKDL 295
Query: 282 DNYHAE-AMQI 291
DNYH AM +
Sbjct: 296 DNYHHSGAMNV 306
>gi|9757981|dbj|BAB08317.1| unnamed protein product [Arabidopsis thaliana]
Length = 330
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/232 (56%), Positives = 157/232 (67%), Gaps = 6/232 (2%)
Query: 62 SSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSE 121
S IA RR R+ PWQ LFED LRAAG SG+EVGT+L+V+NL GVTN+DIRELFSE
Sbjct: 98 SFIIIALPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSE 157
Query: 122 IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN--AE 179
IGE++RYAIH+DKNGRPSG+AEVVY RRSDAF ALK+YNNVLLDG+PM++E++G N +E
Sbjct: 158 IGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGNNSSE 217
Query: 180 IPLQAR--VNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRG 237
PL R VNVTG+NGR KRTVV+ G G G G G RR +G
Sbjct: 218 APLSGRVNVNVTGLNGRLKRTVVIQQGGGGRGRVRGGRGGRGPAPTVS--RRLPIHNQQG 275
Query: 238 QGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAM 289
G GRG G G G G K PV+KSA DLDK+L++YHA+AM
Sbjct: 276 GGMRGGRGGFRARGRGNGGRGRGGGRGNGKKPVEKSAADLDKDLESYHADAM 327
>gi|357147822|ref|XP_003574500.1| PREDICTED: uncharacterized protein LOC100821328 [Brachypodium
distachyon]
Length = 270
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 138/248 (55%), Positives = 175/248 (70%), Gaps = 15/248 (6%)
Query: 48 TGAARRGPL-SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNL 106
+G RGPL NARPS+ IAKSF RT++ W+ DLF DS+ A SGIE GTKLY+SNL
Sbjct: 31 SGLPPRGPLGINARPSARIIAKSFSRTKDMTWRPDLFSDSMAA---SGIETGTKLYISNL 87
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG 166
V+N+DI+ELFSE+G LKR+A+HFD G +G+AEVV+ RRSDA AALKRYNNVLLDG
Sbjct: 88 DYRVSNEDIKELFSEVGHLKRFAVHFDGYGHQNGTAEVVFTRRSDAVAALKRYNNVLLDG 147
Query: 167 KPMKIEVVGTNAEIPLQARVNVTGV-NGRRKRTVVMTSGSGNAGGAAAINR---GPGSQG 222
K MKIEV+G++ +P+ R+NV G NGR RTVVMT G GG A+ NR P ++
Sbjct: 148 KAMKIEVIGSDLGLPMTPRINVVGASNGRATRTVVMTPEMGRRGGGAS-NRPLSNPANRC 206
Query: 223 RRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELD 282
RG + +G+GR + G GRGRG+ RGRG+G+K P +K+ADDLDK+LD
Sbjct: 207 NRGAFQAGRG-----RGRGRAPFQAQFQGRGRGRGQFRGRGRGRKQP-EKTADDLDKDLD 260
Query: 283 NYHAEAMQ 290
+YHAEAM+
Sbjct: 261 SYHAEAMK 268
>gi|115467430|ref|NP_001057314.1| Os06g0256200 [Oryza sativa Japonica Group]
gi|52077258|dbj|BAD46300.1| putative DIP2 protein [Oryza sativa Japonica Group]
gi|113595354|dbj|BAF19228.1| Os06g0256200 [Oryza sativa Japonica Group]
gi|215692775|dbj|BAG88197.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635337|gb|EEE65469.1| hypothetical protein OsJ_20860 [Oryza sativa Japonica Group]
Length = 294
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 154/307 (50%), Positives = 193/307 (62%), Gaps = 30/307 (9%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARR------------GRGRGRGPSGSVSGGRMT 48
MAT +DMSLDD+IK+ + S G GRGRG +G+ G R
Sbjct: 1 MATSLDMSLDDMIKNNRNSRGRGRGRSQGGGRGRGDGQRFSYGSGRGRG-AGTFRG-RGV 58
Query: 49 GAARRGPL-SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLH 107
G R PL + R SSY IAKSF +T++ W+ DLFEDS+ AAG+S E TKLY+SNLH
Sbjct: 59 GVPSRRPLGVSTRSSSYAIAKSFNKTKDIVWRQDLFEDSMVAAGLSVTESSTKLYISNLH 118
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
GVT +DI+ELFSE+G LK A+H+D N RP+GSAEV++ RRS+A AALKRYNNV LDGK
Sbjct: 119 YGVTKEDIQELFSEMGHLKHCAVHYDNNRRPTGSAEVIFTRRSEAVAALKRYNNVRLDGK 178
Query: 168 PMKIEVVGTNAEI--PLQARVNVT-GVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRR 224
PMKIEV+G + + P RV+V G GR +R VVM G G AA GS
Sbjct: 179 PMKIEVIGADLGMAAPSAPRVSVVPGARGRGQREVVMMPGGSGFGRGAA-----GSSNFI 233
Query: 225 GGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
G +R++ + GQG+GRGRGR GRGRGRG +K PV+KSA+ LDKELD+Y
Sbjct: 234 PGWKRNNFAQRGGQGRGRGRGR-------NNFGRGRGRGYVRKGPVEKSAEQLDKELDSY 286
Query: 285 HAEAMQI 291
H+ AM +
Sbjct: 287 HSGAMNV 293
>gi|195626448|gb|ACG35054.1| THO complex subunit 4 [Zea mays]
Length = 306
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/311 (45%), Positives = 183/311 (58%), Gaps = 26/311 (8%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRAR-----------RGRGRGRGPSGSVSGGRMTG 49
MAT +D+ LDD+IKSR RG+G+ RG RGRG G G
Sbjct: 1 MATPLDVPLDDLIKSRXGRGTGRGRGQGGGRGRGDGQRLARGSWRGRGTGNFRERG--LG 58
Query: 50 AARRGPL-SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHP 108
+ R PL N SS+ IAKSF + ++F W+HDLFEDS+ AAG+SGIE GTKLY+SNLH
Sbjct: 59 VSSRRPLGVNTWSSSFAIAKSFNKAKDFVWRHDLFEDSMVAAGLSGIESGTKLYISNLHY 118
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
GVT++D++ELFSE+G LK A+H+D P+GSAEV++ RRS+A AALKRYNN+ LDGK
Sbjct: 119 GVTSEDLQELFSEMGHLKHCAVHYDSYRHPTGSAEVIFTRRSEALAALKRYNNMRLDGKA 178
Query: 169 MKIEVVGTNAEIPLQARVNVTGVNGRRKR----TVVMTSGSGNAGGAAAINRGPGSQ--- 221
MKIEV+G + A ++ V G +R V+M GSG GA+ GP S
Sbjct: 179 MKIEVIGAELGLSAAAVPQISVVPGASRRGQREVVMMPGGSGFGQGAS----GPSSSLPG 234
Query: 222 GRRGGLRRSSQGR-GRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKE 280
+RGG R QGR Q G G G + RGRG ++ +KSA LD E
Sbjct: 235 WKRGGFVRRGQGRVSFPQRGRGQVRSRGRGRGRSSLVQSRGRGYVRRGNAEKSAKQLDNE 294
Query: 281 LDNYHAEAMQI 291
LDNY++ AM +
Sbjct: 295 LDNYNSGAMNV 305
>gi|226505148|ref|NP_001146734.1| uncharacterized protein LOC100280336 [Zea mays]
gi|194704900|gb|ACF86534.1| unknown [Zea mays]
gi|219888533|gb|ACL54641.1| unknown [Zea mays]
gi|413944317|gb|AFW76966.1| THO complex subunit 4 [Zea mays]
Length = 306
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/311 (45%), Positives = 183/311 (58%), Gaps = 26/311 (8%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRAR-----------RGRGRGRGPSGSVSGGRMTG 49
MAT +D+ LDD+IKSR RG+G+ RG RGRG G G
Sbjct: 1 MATPLDVPLDDLIKSRAGRGTGRGRGQGGGRGRGDGQRLARGSWRGRGTGNFRERG--LG 58
Query: 50 AARRGPL-SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHP 108
+ R PL N SS+ IAKSF + ++F W+HDLFEDS+ AAG+SGIE GTKLY+SNLH
Sbjct: 59 VSSRRPLGVNTWSSSFAIAKSFNKAKDFVWRHDLFEDSMVAAGLSGIESGTKLYISNLHY 118
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
GVT++D++ELFSE+G LK A+H+D P+GSAEV++ RRS+A AALKRYNN+ LDGK
Sbjct: 119 GVTSEDLQELFSEMGHLKHCAVHYDSYRHPTGSAEVIFTRRSEALAALKRYNNMRLDGKA 178
Query: 169 MKIEVVGTNAEIPLQARVNVTGVNGRRKR----TVVMTSGSGNAGGAAAINRGPGSQ--- 221
MKIEV+G + A ++ V G +R V+M GSG GA+ GP S
Sbjct: 179 MKIEVIGAELGLSAAAVPQISVVPGASRRGQREVVMMPGGSGFGQGAS----GPSSSLPG 234
Query: 222 GRRGGLRRSSQGR-GRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKE 280
+RGG R QGR Q G G G + RGRG ++ +KSA LD E
Sbjct: 235 WKRGGFVRRGQGRVSFPQRGRGQVRSRGRGRGRSSFVQSRGRGYVRRGNAEKSAKQLDNE 294
Query: 281 LDNYHAEAMQI 291
LDNY++ AM +
Sbjct: 295 LDNYNSGAMNV 305
>gi|357124609|ref|XP_003563990.1| PREDICTED: uncharacterized protein LOC100841511 [Brachypodium
distachyon]
Length = 311
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/317 (44%), Positives = 177/317 (55%), Gaps = 33/317 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERE--------------------RGQGRARRGRGRGRGPSG 40
M T +DMSLDD+IK+R R RG G+ +G
Sbjct: 1 METSLDMSLDDMIKNRSGRGRGRTGVRGQRGGRGRGDGQNLGRGDGQRLGRGFGRGRGAG 60
Query: 41 SVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTK 100
+ G + A+R N R SSY IAKSF +T++F W HD FEDS+ AAG+SGIE GTK
Sbjct: 61 TFRGRGLRVPAQRPLGVNTRSSSYAIAKSFNKTKDFAWTHDRFEDSMVAAGLSGIESGTK 120
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
LY+SNLH GVT +D++ELFSE+G LK A+H+D N RP+GSAEV++ RRS+A ALKRYN
Sbjct: 121 LYISNLHYGVTKEDLQELFSEMGHLKHCAVHYDNNRRPTGSAEVIFTRRSEAVQALKRYN 180
Query: 161 NVLLDGKPMKIEVVGTNAEIPLQA--RVNVT-GVNGRRKRTVVM---TSGSGNAGGAAAI 214
NV LDGK MKIEV+G N + + RVNV GV GR +R VVM TS G G A +
Sbjct: 181 NVRLDGKEMKIEVIGANLGLAAVSAPRVNVIPGVKGRGQREVVMMPRTSAFGR-GAADSS 239
Query: 215 NRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSA 274
N PG + R S RG G G G +K P +KSA
Sbjct: 240 NFLPGWK------RNSFAQRGGQARGRGRGRGRGRGLGRGIGRGHGRGVYVRKGPSEKSA 293
Query: 275 DDLDKELDNYHAEAMQI 291
+ LDKELD YH+ AM +
Sbjct: 294 EQLDKELDTYHSGAMNV 310
>gi|413922290|gb|AFW62222.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
Length = 184
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 131/170 (77%), Gaps = 8/170 (4%)
Query: 35 GRGPSGSVSGGRMTGAARRGPL-SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGIS 93
GRG G V GR +G A RGPL N+RPS+ TIAKSF RT++ W+ DLF DS+ A S
Sbjct: 21 GRG--GHVLRGR-SGLAPRGPLGVNSRPSARTIAKSFSRTKDMTWRPDLFSDSMAA---S 74
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAF 153
GIE GTKLY+SNL GV+N+DI+ELFSE+G LKR+A+H+D GRP+G+AEVV+ RRSDA
Sbjct: 75 GIETGTKLYISNLDYGVSNEDIKELFSEVGHLKRFAVHYDGYGRPNGTAEVVFTRRSDAI 134
Query: 154 AALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGV-NGRRKRTVVMT 202
AALKRYNNVLLDGK MKIEV+G + +P+ R+NV G NGR RTVVMT
Sbjct: 135 AALKRYNNVLLDGKAMKIEVIGNDLGLPMTPRINVVGASNGRATRTVVMT 184
>gi|218201182|gb|EEC83609.1| hypothetical protein OsI_29305 [Oryza sativa Indica Group]
gi|222640591|gb|EEE68723.1| hypothetical protein OsJ_27390 [Oryza sativa Japonica Group]
Length = 274
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/236 (52%), Positives = 156/236 (66%), Gaps = 28/236 (11%)
Query: 69 SFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
SF RT++ W+ DLF DS+ A SGIE GTKLY+SNL GV+N+DI+ELFSE+G LKR+
Sbjct: 51 SFSRTKDMTWRPDLFSDSMAA---SGIETGTKLYISNLDYGVSNEDIKELFSEVGHLKRF 107
Query: 129 AIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNV 188
A+HFD GRP+G+AEVV+ RRSDA AALKRYNNVLLDGK MKIEV+G++ +P+ R+NV
Sbjct: 108 AVHFDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEVIGSDLGLPMTPRINV 167
Query: 189 TGV-NGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQG-------- 239
G NGR RTVVMT G RG GS R G + RG Q
Sbjct: 168 VGASNGRPTRTVVMTPEIG--------QRGSGSSSRPTGPTVNRYNRGAFQAGRGRGRGR 219
Query: 240 -----QGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
Q + +GRG G GRG+ +GRGRG+ + K+AD+LDK+L+ YHAEAM+
Sbjct: 220 GRAPFQSQFQGRGTGSVRGRGQFQGRGRGRRQAG---KTADELDKDLETYHAEAMK 272
>gi|46982390|gb|AAT08172.1| Hin19 [Nicotiana tabacum]
Length = 219
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 125/228 (54%), Positives = 149/228 (65%), Gaps = 20/228 (8%)
Query: 68 KSFRRTRNFPWQHD--LFEDSLRAAGIS-GIEVGTKLYVSNLHPGVTNDDIRELFSEIGE 124
+S RRT+N PWQ+ LFEDSLRAAGIS G+E GTK+YVSNL GVTN DIRELFSEIGE
Sbjct: 6 QSSRRTKNLPWQNGNGLFEDSLRAAGISSGLESGTKVYVSNLDVGVTNSDIRELFSEIGE 65
Query: 125 LKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQA 184
L RYAIH+DKNGRPSG+AEVV+ARRSDA+ A KRYNNV LDGKPMKIEVV + +PL A
Sbjct: 66 LIRYAIHYDKNGRPSGAAEVVFARRSDAYQAHKRYNNVQLDGKPMKIEVVAPSTGMPLSA 125
Query: 185 RVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGRGR 244
RV+V +GRR V + + G A+A SQ RGG +S
Sbjct: 126 RVDVGRGSGRRT-VVTLPGSARGRGAASAAANRGSSQRGRGGFGNASGRWRNRGRG---- 180
Query: 245 GRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYH--AEAMQ 290
G G+ +KN V+KSA++LDKEL+ YH A+AMQ
Sbjct: 181 ----------GGRGRGRGGRVRKNGVEKSAEELDKELEKYHATADAMQ 218
>gi|125554793|gb|EAZ00399.1| hypothetical protein OsI_22414 [Oryza sativa Indica Group]
Length = 272
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 147/297 (49%), Positives = 183/297 (61%), Gaps = 32/297 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAAR---RGPLS 57
MAT +DMSLDD+IK+ + S GRGRG G S GR GA RG
Sbjct: 1 MATSLDMSLDDMIKNNRNSRGRGRGRSQGGGRGRGDGQRFSYGSGRGRGAGTFRGRG--- 57
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
SF +T++ W+ DLFEDS+ AAG+S E TKLY+SNLH GVT +DI+E
Sbjct: 58 -----------SFNKTKDIVWRQDLFEDSMVAAGLSVTESSTKLYISNLHYGVTKEDIQE 106
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LFSE+G LK A+H+D N RP+GSAEV++ RRS+A AALKRYNNV LDGKPMKIEV+G +
Sbjct: 107 LFSEMGHLKHCAVHYDNNRRPTGSAEVIFTRRSEAVAALKRYNNVRLDGKPMKIEVIGAD 166
Query: 178 AEI--PLQARVNVT-GVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGR 234
+ P RV+V G GR +R VVM G G AA GS G +R++ +
Sbjct: 167 LGMAAPSAPRVSVVPGARGRGQREVVMMPGGSGFGRGAA-----GSSNFIPGWKRNNFAQ 221
Query: 235 GRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQI 291
GQG+GRGRGR GRGRGRG +K PV+KSA+ LDKELD+YH+ AM +
Sbjct: 222 RGGQGRGRGRGR-------NNFGRGRGRGYVRKGPVEKSAEQLDKELDSYHSGAMNV 271
>gi|356539036|ref|XP_003538006.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
max]
Length = 247
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/300 (45%), Positives = 170/300 (56%), Gaps = 63/300 (21%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
M+ +DMSLDDIIK+ KKS +GR R PSGS G +RR P A
Sbjct: 1 MSAAMDMSLDDIIKNNKKSGSGSSRGRIR--------PSGS-------GPSRRFPNRAAN 45
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAG--------ISGIEVGTKLYVSNLHPGVT 111
R + Y AK+ T WQHDL+ D AA + IE GTKLY+SNL GV+
Sbjct: 46 RAAPYATAKAPEAT----WQHDLYADQQVAAAGYPAQGGRAASIETGTKLYISNLDYGVS 101
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
+DDI+ELF+E+G+LKR+A+H+D++GR G+AEVV++RR+DA AA+KRYNNV LDGKPMKI
Sbjct: 102 SDDIKELFAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKI 161
Query: 172 EVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSS 231
E+VGTN P G A A N G+ G G+ RS
Sbjct: 162 EIVGTNISTP---------------------------GVAPARN---GAIGNFDGVPRSG 191
Query: 232 QGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQI 291
QGRG + GRG+G GRGRGRG K SADDLD +L+ YHAEAMQ+
Sbjct: 192 QGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEK-----VSADDLDADLEKYHAEAMQL 246
>gi|356542471|ref|XP_003539690.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
max]
Length = 247
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 135/299 (45%), Positives = 170/299 (56%), Gaps = 61/299 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +DMSLDDIIK+ KKS G G +R GR R PSGS G RR P R
Sbjct: 1 MSAAMDMSLDDIIKNNKKS----GSGSSR---GRTR-PSGS-------GPTRRLP---NR 42
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAG--------ISGIEVGTKLYVSNLHPGVTN 112
++ + + WQHDL+ D AA + IE GTKLY+SNL GV+N
Sbjct: 43 AANRAAPYAPAKAPEATWQHDLYADQHVAAAGYPAQGGRAASIETGTKLYISNLDYGVSN 102
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
DDI+ELF+E+G+LKR+A+H+D++GR G+AEVV++RR+DA +A+KRYNNV LDGKPMKIE
Sbjct: 103 DDIKELFAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIE 162
Query: 173 VVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQ 232
+VGTN P G A A N G+ G G+ RS Q
Sbjct: 163 IVGTNISTP---------------------------GVAPAPN---GAIGNFNGVPRSGQ 192
Query: 233 GRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQI 291
GRG + GRG+G GRGRGRG G K SADDLD +L+ YHAEAMQ+
Sbjct: 193 GRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEK-----VSADDLDADLEKYHAEAMQL 246
>gi|40644804|emb|CAE53910.1| putative DIP2 protein [Triticum aestivum]
Length = 259
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 127/187 (67%), Gaps = 8/187 (4%)
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
N R SSY IAKSF +T++F W HD F DS+ AAG+ GIE GTKLYVSNLH GVT +D++E
Sbjct: 74 NTRSSSYAIAKSFNKTKDFAWTHDRFGDSMVAAGLPGIETGTKLYVSNLHYGVTKEDLQE 133
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LFSE+G LK +H+D N P+GSAEV++ RRS+A ALKRYNNV LDGK M+ E++G N
Sbjct: 134 LFSEMGHLKNCIVHYDNNRHPTGSAEVIFTRRSEAVQALKRYNNVRLDGKEMRREMIGAN 193
Query: 178 ---AEIPLQARVN-VTGVNGRRKRTVVMTSGSGNAGGAA-AINRGPGSQGRRGGLRR--S 230
A P RVN V+G GR +R VVM+ +G GA + + PG + G +R S
Sbjct: 194 LGLAAAP-APRVNVVSGARGRGQREVVMSHPNGFGRGATDSSSFLPGWKRNNGFAQRGGS 252
Query: 231 SQGRGRG 237
GRGRG
Sbjct: 253 VLGRGRG 259
>gi|255581121|ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor binding protein, putative [Ricinus communis]
Length = 247
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 156/300 (52%), Gaps = 65/300 (21%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M++ +DMSLDDIIKS KK G G +R GRGR GP G RR N R
Sbjct: 1 MSSALDMSLDDIIKSNKKP----GSGNSR-GRGRSSGP----------GPTRR---FNNR 42
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAG----------ISGIEVGTKLYVSNLHPGV 110
++ + + WQHD+F D SGIE GTKLY+SNL GV
Sbjct: 43 GTNRAAPYAAAKAPESTWQHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGV 102
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMK 170
+N+DI+ELFSE+G+LKRY+IH+D++GR G+AEVV++RR+DA AA+KRYNNV LDGKPMK
Sbjct: 103 SNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMK 162
Query: 171 IEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRS 230
IE+VGTN + NG GN+ GA G QGR G +RR
Sbjct: 163 IEIVGTN----IATPAATPAANG----------NFGNSNGAPR-----GGQGRGGTMRRP 203
Query: 231 SQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
RG G + SA+DLD +L+ YH+EAMQ
Sbjct: 204 ---------------RGASSDGRGFGRGRGRGRGRGEKV---SAEDLDADLEKYHSEAMQ 245
>gi|168020731|ref|XP_001762896.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686005|gb|EDQ72397.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 274
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 158/307 (51%), Gaps = 52/307 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGR--GPSGSVSGG----RMTGAARRG 54
M + +DMSLDD+IKS K + G R G + + G RM+G ARR
Sbjct: 1 MTSALDMSLDDLIKSNKTATHGGRGGGRGAAAPVPRRVGATAAAEEGYPDSRMSGPARR- 59
Query: 55 PLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGIS------GIEVGTKLYVSNLHP 108
T A RR + PWQHD++E+ A S IE GTKLY+SNL
Sbjct: 60 --------QVTRATPVRRAMDSPWQHDMYENFAPAPSASVRGTGGNIETGTKLYISNLDH 111
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
GV+NDDI+ELF E+G+LKR +I++D++GR G+AEVV+ R+ DA A++RYNNV LDGKP
Sbjct: 112 GVSNDDIKELFGEVGDLKRCSINYDRSGRSKGTAEVVFTRKPDAVNAMRRYNNVQLDGKP 171
Query: 169 MKIEVVGTN-AEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGL 227
MKIE++GTN P+ A SG AA R L
Sbjct: 172 MKIEMIGTNLVAAPVPA-----------------IRSSGAMASLAA---------RARHL 205
Query: 228 RRSSQGRGRGQGQGRGR----GRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDN 283
+S RG RGR G GGG G G + V+KSA+DLD EL++
Sbjct: 206 SSTSLPFARGPVSDRGRPGSSALRGRGGGRSAGGVGGRGERRSGPAVEKSAEDLDAELES 265
Query: 284 YHAEAMQ 290
YHAEAMQ
Sbjct: 266 YHAEAMQ 272
>gi|224059518|ref|XP_002299886.1| predicted protein [Populus trichocarpa]
gi|222847144|gb|EEE84691.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 126/179 (70%), Gaps = 23/179 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRAR-RGRGRGRGPSGSVSGGRMTGAARRGPLSNA 59
M++ +DMSLDDIIK+ KK G A RGRGRG PSG+ G ARR P A
Sbjct: 1 MSSALDMSLDDIIKNSKKP------GSANFRGRGRGH-PSGA-------GPARRFPNRAA 46
Query: 60 -RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
R + YT AK+ T WQHD+F D ++ S +E G KLYVSNL GV+N+DI+EL
Sbjct: 47 NRSAPYTAAKAPEST----WQHDMFRD--QSGRTSSLE-GAKLYVSNLDYGVSNEDIKEL 99
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
F E+GELKRY+IH+D++GR G+AEVV+AR+++A AA+KRYNNV LDGKPMKIE+VGTN
Sbjct: 100 FLEVGELKRYSIHYDRSGRSKGTAEVVFARQAEAVAAVKRYNNVQLDGKPMKIEIVGTN 158
>gi|225435024|ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product [Vitis vinifera]
Length = 243
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 134/297 (45%), Positives = 167/297 (56%), Gaps = 61/297 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
M+ +DMSLDD+IK+ K+S RG G G ARR P A
Sbjct: 1 MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSG--------------PGPARRLPNRGAN 46
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRA----AG-ISGIEVGTKLYVSNLHPGVTNDD 114
R + Y+++K+ T WQHD+F D A AG S IE GTKLY+SNL GV+N+D
Sbjct: 47 RITPYSVSKAPETT----WQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNED 102
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
I+ELFSE+G+LKRY+IH+D++GR G+AEVV++RR DA AA+KRYNNV LDGKPMKIE+V
Sbjct: 103 IKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIV 162
Query: 175 GTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGR 234
GTN P AA G+ G G RS+QGR
Sbjct: 163 GTNIATP-----------------------------AAVPPVTNGTFGNSNGGLRSAQGR 193
Query: 235 GRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQI 291
QG+ RG G G G GRGRGRGRG SA+DLD +L+ YH+EAMQI
Sbjct: 194 VGSQGRPRGGSGGRGFGRGRGRGRGRGEK--------VSAEDLDADLEKYHSEAMQI 242
>gi|449450684|ref|XP_004143092.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
gi|449508143|ref|XP_004163231.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 151/297 (50%), Gaps = 67/297 (22%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK+ KKS +GR R G RR P A
Sbjct: 1 MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSG---------------PGPVRRFPNRAAN 45
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDS-----LRAAGISGIEVGTKLYVSNLHPGVTNDDI 115
+ Y+ K+ T WQHD+F D ++ S I+ GTKLY+SNL GV+N+DI
Sbjct: 46 RTPYSAPKAPETT----WQHDMFADPSSGFLVQGGRASAIQTGTKLYISNLDYGVSNEDI 101
Query: 116 RELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
+ELFSE+G++KR+ IH+DK+GR G+AEVV++RR DA AA+K+YNNV LDGKPMKIE+VG
Sbjct: 102 KELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVG 161
Query: 176 TNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRG 235
TN P G AA+N S G R QGR
Sbjct: 162 TNISTPA-------------------------VGPTAAVNPFENS----NGAPRRQQGR- 191
Query: 236 RGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDK-SADDLDKELDNYHAEAMQI 291
GG + + P +K SA+DLD +L+ YHAE+MQI
Sbjct: 192 ------------GGPPSRQRGHGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQI 236
>gi|147843918|emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]
Length = 281
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 172/304 (56%), Gaps = 37/304 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
M+ +DMSLDD+IK+ K+S RG G G ARR P A
Sbjct: 1 MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSG--------------PGPARRLPNRGAN 46
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRA----AG-ISGIEVGTKLYVSNLHPGVTNDD 114
R + Y+++K+ T WQHD+F D A AG S IE GTKLY+SNL GV+N+D
Sbjct: 47 RITPYSVSKAPETT----WQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNED 102
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
I+ELFSE+G+LKRY+IH+D++GR G+AEVV++RR DA AA+KRYNNV LDGKPMKIE+V
Sbjct: 103 IKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIV 162
Query: 175 GTNAEIPLQARVNVTGVNG------RRKR-TVVMTSGSGNAGGAAAINRGPGSQGRRGGL 227
GTN P G G RR R +V S + N + G+
Sbjct: 163 GTNIATPAAVPPVTNGTFGNSNGGLRRLRGELVHRVKSXPTYFHPSWN---ALLLVKFGV 219
Query: 228 RRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAE 287
S G QGRG +G GG GRG GRGRG+G+ SA+DLD +L+ YH+E
Sbjct: 220 ---SWITGLACAQGRGGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSE 276
Query: 288 AMQI 291
AMQI
Sbjct: 277 AMQI 280
>gi|356550261|ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Glycine max]
Length = 243
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 157/296 (53%), Gaps = 59/296 (19%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +DM+L+DIIK+ KKS RGRGR GP G ARR P R
Sbjct: 1 MSAALDMTLEDIIKNNKKSSLAN-----TRGRGRASGP----------GPARRLP---NR 42
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISG-----IEVGTKLYVSNLHPGVTNDDI 115
++ + + W+HD++ + AA G IE GTKLY+SNL GV+NDDI
Sbjct: 43 AANRAAPYAAAKAPETAWKHDMYANQPVAAAYPGGRASSIETGTKLYISNLDYGVSNDDI 102
Query: 116 RELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
+ELF E+G++KR+ +H+D++GR G+AEVV++RR+DA AA+KRYNNV LDGKPMK+E+VG
Sbjct: 103 KELFLEVGDVKRHTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVEIVG 162
Query: 176 TNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRG 235
TN A+N G+ G G+ RS QGR
Sbjct: 163 TNI---------------------------ATHAAPPAVN---GTFGNPTGVPRSGQGRS 192
Query: 236 RGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQI 291
G+ RG RG G GR + SA+DLD +L+ YHAEAMQ+
Sbjct: 193 GSLGRPRGGSRGRGSIQRGRGRGRGGRDE------KVSAEDLDADLEKYHAEAMQL 242
>gi|297793551|ref|XP_002864660.1| hypothetical protein ARALYDRAFT_496130 [Arabidopsis lyrata subsp.
lyrata]
gi|297310495|gb|EFH40919.1| hypothetical protein ARALYDRAFT_496130 [Arabidopsis lyrata subsp.
lyrata]
Length = 239
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 117/183 (63%), Gaps = 22/183 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+T +DMSLDD+I +KS +G A RG G GP+ R R+ + R
Sbjct: 1 MSTGLDMSLDDMIAKNRKS-----RGGAGPARGTGPGPT------RRNNPNRK----STR 45
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFED---SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
+ Y AK+ T W HD+F D +GIE GTKLY+SNL GV N+DI+E
Sbjct: 46 SAPYQSAKAPEST----WGHDMFSDRSEDFPPRSSAGIETGTKLYISNLDYGVMNEDIKE 101
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LF+E+GELKRY +HFD++GR G+AEVVY+RR DA AA+K+YN+V LDGKPMKIE+VGTN
Sbjct: 102 LFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTN 161
Query: 178 AEI 180
+
Sbjct: 162 LQT 164
>gi|449462627|ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 116/186 (62%), Gaps = 22/186 (11%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK+ KKS RAR G G GPS R G R P S ++
Sbjct: 1 MAEPLDMSLDDIIKNNKKSGS--SNFRARGGASSGPGPSRRF---RNRGLNRATPYSTSK 55
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAG-----ISGIEVGTKLYVSNLHPGVTNDDI 115
W HD+F D A S IE GTKLYVSNL GV+N+DI
Sbjct: 56 APETA------------WSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDI 103
Query: 116 RELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
+ELFSE+G++KRY+I++DK+GR G+AE+V++R++DA AA+KRYNNV LDGKPMK+E+VG
Sbjct: 104 KELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVG 163
Query: 176 TNAEIP 181
TN P
Sbjct: 164 TNIVTP 169
>gi|226503573|ref|NP_001145994.1| uncharacterized protein LOC100279524 [Zea mays]
gi|195619398|gb|ACG31529.1| THO complex subunit 4 [Zea mays]
gi|195624712|gb|ACG34186.1| THO complex subunit 4 [Zea mays]
gi|219885251|gb|ACL53000.1| unknown [Zea mays]
gi|414866140|tpg|DAA44697.1| TPA: THO complex subunit 4 isoform 1 [Zea mays]
gi|414866141|tpg|DAA44698.1| TPA: THO complex subunit 4 isoform 2 [Zea mays]
Length = 253
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 158/294 (53%), Gaps = 47/294 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DM+LDDIIK+ KKS G ARR RG GS G + +R R
Sbjct: 1 MAETLDMTLDDIIKNNKKSNP--SSGGARRSRGGSAPGGGSGGVGPTRRSFKRA---GNR 55
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFE----DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ Y K+ + WQHD++ +S +E GTKLY+SNL GV+NDDI+
Sbjct: 56 QAPYQPPKA----PDAAWQHDMYPAVAAGGGGGGRVSALETGTKLYISNLDFGVSNDDIK 111
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
ELFSE+G+LKR++I +D++GR G+AEVV+ARRSDA AA+K+YNNV LDGKPMKIE+VGT
Sbjct: 112 ELFSELGDLKRFSIIYDRSGRSKGTAEVVFARRSDAVAAVKKYNNVQLDGKPMKIEIVGT 171
Query: 177 NAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGR 236
N A + NG R V ++ G A A R P
Sbjct: 172 NTPT---ASAALPVSNGGHARNAVRSAPRG-AAPAGVPQRRP------------------ 209
Query: 237 GQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
Q GR G GGG G+ R + KSA++LD +L+ YHA+AMQ
Sbjct: 210 HQRGGRRSGGSGGGRRGKERSKP------------KSAEELDADLEKYHADAMQ 251
>gi|449512820|ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding
protein 2-like [Cucumis sativus]
Length = 248
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 115/186 (61%), Gaps = 22/186 (11%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK+ KKS RAR G G GPS R G R P S ++
Sbjct: 1 MAEPLDMSLDDIIKNNKKSGS--SNFRARGGASSGPGPSRRF---RNRGLNRATPYSTSK 55
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAG-----ISGIEVGTKLYVSNLHPGVTNDDI 115
W HD+F D A S IE GTKLYVSNL GV+N+DI
Sbjct: 56 APETA------------WSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDI 103
Query: 116 RELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
+ELFSE+G++KRY+I++DK+GR G+AE+ ++R++DA AA+KRYNNV LDGKPMK+E+VG
Sbjct: 104 KELFSEVGDVKRYSINYDKSGRSKGTAEIXFSRQADALAAIKRYNNVQLDGKPMKLEIVG 163
Query: 176 TNAEIP 181
TN P
Sbjct: 164 TNIVTP 169
>gi|194703592|gb|ACF85880.1| unknown [Zea mays]
gi|413956152|gb|AFW88801.1| THO complex subunit 4 isoform 1 [Zea mays]
gi|413956153|gb|AFW88802.1| THO complex subunit 4 isoform 2 [Zea mays]
Length = 254
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 153/299 (51%), Gaps = 56/299 (18%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
MA +DM+LDDIIK+ KKS + RG R RG S G G RR P A
Sbjct: 1 MAETLDMTLDDIIKNNKKS------NPSSRGARRSRGVSAPGGGTGGVGPTRR-PFKRAG 53
Query: 60 -RPSSYTIAKSFRRTRNFPWQHDLFE-----DSLRAAGISGIEVGTKLYVSNLHPGVTND 113
R + Y K+ + WQHD++ +S +E G KLY+SNL GV+N+
Sbjct: 54 NRQAPYQPPKA----PDAAWQHDMYPAVAAGGGGGGGRVSALETGAKLYISNLDFGVSNE 109
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DI+ELFSE+G+LKR++I++D++GR G+AEVV+ARRSDA AA+K+Y+NV LDGKPMKIE+
Sbjct: 110 DIKELFSELGDLKRFSINYDRSGRSKGTAEVVFARRSDAVAAVKKYDNVQLDGKPMKIEI 169
Query: 174 VGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPG--SQGRRGGLRRSS 231
VGTN A G + R NA +A + P SQ R
Sbjct: 170 VGTNTPAAAAAHPVPNGGHAR------------NAARSAPKDAAPAGMSQHRTHQRGGRR 217
Query: 232 QGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
G +G+ R + KS ++LD +L+ YHA+AMQ
Sbjct: 218 AAGSGGGRRGKERSKP------------------------KSTEELDADLEKYHADAMQ 252
>gi|9757916|dbj|BAB08363.1| RNA and export factor binding protein 2-I-like protein [Arabidopsis
thaliana]
Length = 239
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 117/186 (62%), Gaps = 23/186 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS--N 58
M+T +DMSLDD+I + R+ RG G GP+ G G RR + +
Sbjct: 1 MSTGLDMSLDDMI------------AKNRKSRG-GAGPARGTGSGSGPGPTRRNNPNRKS 47
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLF----EDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
R + Y AK+ T W HD+F ED +GIE GTKLY+SNL GV N+D
Sbjct: 48 TRSAPYQSAKAPEST----WGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNED 103
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
I+ELF+E+GELKRY +HFD++GR G+AEVVY+RR DA AA+K+YN+V LDGKPMKIE+V
Sbjct: 104 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIV 163
Query: 175 GTNAEI 180
GTN +
Sbjct: 164 GTNLQT 169
>gi|334188502|ref|NP_001190572.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009875|gb|AED97258.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 245
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 117/186 (62%), Gaps = 23/186 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS--N 58
M+T +DMSLDD+I + R+ RG G GP+ G G RR + +
Sbjct: 1 MSTGLDMSLDDMI------------AKNRKSRG-GAGPARGTGSGSGPGPTRRNNPNRKS 47
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLF----EDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
R + Y AK+ T W HD+F ED +GIE GTKLY+SNL GV N+D
Sbjct: 48 TRSAPYQSAKAPEST----WGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNED 103
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
I+ELF+E+GELKRY +HFD++GR G+AEVVY+RR DA AA+K+YN+V LDGKPMKIE+V
Sbjct: 104 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIV 163
Query: 175 GTNAEI 180
GTN +
Sbjct: 164 GTNLQT 169
>gi|186532595|ref|NP_001119461.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009874|gb|AED97257.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 211
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 117/185 (63%), Gaps = 23/185 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS--N 58
M+T +DMSLDD+I +KS RG G GP+ G G RR + +
Sbjct: 1 MSTGLDMSLDDMIAKNRKS------------RG-GAGPARGTGSGSGPGPTRRNNPNRKS 47
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLF----EDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
R + Y AK+ T W HD+F ED +GIE GTKLY+SNL GV N+D
Sbjct: 48 TRSAPYQSAKAPEST----WGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNED 103
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
I+ELF+E+GELKRY +HFD++GR G+AEVVY+RR DA AA+K+YN+V LDGKPMKIE+V
Sbjct: 104 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIV 163
Query: 175 GTNAE 179
GTN +
Sbjct: 164 GTNLQ 168
>gi|195637864|gb|ACG38400.1| THO complex subunit 4 [Zea mays]
Length = 253
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/298 (37%), Positives = 153/298 (51%), Gaps = 55/298 (18%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
MA +DM+LDDIIK+ KKS + RG R RG S G G RR P A
Sbjct: 1 MAETLDMTLDDIIKNNKKS------NPSSRGARRSRGGSAPGGGTGGVGPTRR-PFKRAG 53
Query: 60 -RPSSYTIAKSFRRTRNFPWQHDLFE----DSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
R + Y K+ + WQHD++ +S +E G KLY+SNL GV+N+D
Sbjct: 54 NRQAPYQPPKA----PDAAWQHDMYPAVAAXGGGGGRVSALETGAKLYISNLDFGVSNED 109
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
I+ELFSE+G+LKR++I++D++GR G+AEVV+ARRSDA AA+K+Y+NV LDGKPMKIE+V
Sbjct: 110 IKELFSELGDLKRFSINYDRSGRSKGTAEVVFARRSDAVAAVKKYDNVQLDGKPMKIEIV 169
Query: 175 GTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPG--SQGRRGGLRRSSQ 232
GTN A G + R NA +A + P SQ R
Sbjct: 170 GTNTPAAASAHPVPNGGHAR------------NAARSAPKDAAPAGMSQHRPHQRXGRRA 217
Query: 233 GRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
G +G+ R + KS ++LD +L+ YHA+AMQ
Sbjct: 218 AGSGGGRRGKERSKP------------------------KSTEELDADLEKYHADAMQ 251
>gi|30697310|ref|NP_851229.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|22531190|gb|AAM97099.1| transcriptional coactivator-like protein [Arabidopsis thaliana]
gi|23198018|gb|AAN15536.1| transcriptional coactivator-like protein [Arabidopsis thaliana]
gi|332009871|gb|AED97254.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 244
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 117/186 (62%), Gaps = 23/186 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS--N 58
M+T +DMSLDD+I + R+ RG G GP+ G G RR + +
Sbjct: 1 MSTGLDMSLDDMI------------AKNRKSRG-GAGPARGTGSGSGPGPTRRNNPNRKS 47
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLF----EDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
R + Y AK+ T W HD+F ED +GIE GTKLY+SNL GV N+D
Sbjct: 48 TRSAPYQSAKAPEST----WGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNED 103
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
I+ELF+E+GELKRY +HFD++GR G+AEVVY+RR DA AA+K+YN+V LDGKPMKIE+V
Sbjct: 104 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIV 163
Query: 175 GTNAEI 180
GTN +
Sbjct: 164 GTNLQT 169
>gi|223944243|gb|ACN26205.1| unknown [Zea mays]
gi|413956151|gb|AFW88800.1| hypothetical protein ZEAMMB73_191156 [Zea mays]
Length = 244
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 118/184 (64%), Gaps = 18/184 (9%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
MA +DM+LDDIIK+ KKS + RG R RG S G G RR P A
Sbjct: 1 MAETLDMTLDDIIKNNKKS------NPSSRGARRSRGVSAPGGGTGGVGPTRR-PFKRAG 53
Query: 60 -RPSSYTIAKSFRRTRNFPWQHDLFE-----DSLRAAGISGIEVGTKLYVSNLHPGVTND 113
R + Y K+ + WQHD++ +S +E G KLY+SNL GV+N+
Sbjct: 54 NRQAPYQPPKA----PDAAWQHDMYPAVAAGGGGGGGRVSALETGAKLYISNLDFGVSNE 109
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DI+ELFSE+G+LKR++I++D++GR G+AEVV+ARRSDA AA+K+Y+NV LDGKPMKIE+
Sbjct: 110 DIKELFSELGDLKRFSINYDRSGRSKGTAEVVFARRSDAVAAVKKYDNVQLDGKPMKIEI 169
Query: 174 VGTN 177
VGTN
Sbjct: 170 VGTN 173
>gi|21555029|gb|AAM63758.1| transcriptional coactivator-like protein [Arabidopsis thaliana]
Length = 243
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 116/186 (62%), Gaps = 23/186 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS--N 58
M+T +DMSLDD+I + R+ RG G GP+ G G RR + +
Sbjct: 1 MSTGLDMSLDDMI------------AKNRKSRG-GAGPARGTGSGSGPGPTRRNNPNRKS 47
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLF----EDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
R + Y AK+ T W HD+F ED +GIE GTKLY+S L GV N+D
Sbjct: 48 TRSAPYQSAKAPEST----WGHDMFSDRSEDHRSGRSSAGIETGTKLYISXLDYGVMNED 103
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
I+ELF+E+GELKRY +HFD++GR G+AEVVY+RR DA AA+K+YN+V LDGKPMKIE+V
Sbjct: 104 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIV 163
Query: 175 GTNAEI 180
GTN +
Sbjct: 164 GTNLQT 169
>gi|51490665|emb|CAG26903.1| ALY protein [Nicotiana benthamiana]
Length = 252
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 117/193 (60%), Gaps = 27/193 (13%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA-RPSS 63
+DMSLDD+IK + K++ + RG G GP ARR P +A R +
Sbjct: 6 LDMSLDDLIK-KNKTDTGGKRRGRGRGGASGPGP------------ARRFPNRSANRAAP 52
Query: 64 YTIAKSFRRTRNFPWQHDLFEDSLRAAGI---------SGIEVGTKLYVSNLHPGVTNDD 114
Y+ AK+ W HD+F + +A S I GTKLY+SNL GV+N+D
Sbjct: 53 YSTAKAPEAA----WNHDMFAAADQAFPFGQAGGDQAASSISTGTKLYISNLDYGVSNED 108
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
I+ELFSE G+LKRYAIH+D++GR G+AEVV++RR DA AA+KRYNNV LDGKPMKIE+V
Sbjct: 109 IKELFSEAGDLKRYAIHYDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQLDGKPMKIEIV 168
Query: 175 GTNAEIPLQARVN 187
GTN P N
Sbjct: 169 GTNIATPAAPAFN 181
>gi|357472739|ref|XP_003606654.1| THO complex subunit [Medicago truncatula]
gi|355507709|gb|AES88851.1| THO complex subunit [Medicago truncatula]
Length = 376
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 147/286 (51%), Gaps = 54/286 (18%)
Query: 18 KSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA--RPSSYTIAKSFRRTRN 75
KS+ GR+R G G GP ARR L+ A R + Y+ AK+ T
Sbjct: 132 KSQPCLQGGRSRPGPASGPGP------------ARRI-LNRAGNRAAPYSAAKAPETT-- 176
Query: 76 FPWQHDLFEDSLRAAGIS---------GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELK 126
WQHDL+ D AA IE GTKLY+SNL GV+NDDI+ELFSE+G+LK
Sbjct: 177 --WQHDLYADQHVAAAAYPAAQGGRAPSIETGTKLYISNLDYGVSNDDIKELFSEVGDLK 234
Query: 127 RYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARV 186
R+ +H+D++GR G+AEVV++RR DA AA+KRYNNV LDGKPMKIE+VGTN P A
Sbjct: 235 RHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGAAP- 293
Query: 187 NVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGS-QGRRGGLRRSSQGRGRGQGQGRGRG 245
V+ + GN G P S QGR G R +
Sbjct: 294 -------------VVNAPIGNFNGI------PQSGQGRVGEFRGPGGRGQGIRRNRGRGR 334
Query: 246 RGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQI 291
GG GG G K SA+DLD EL+ YHAEAMQ+
Sbjct: 335 GSGGPRGGGRGGGRGRGRDDK-----VSAEDLDAELEKYHAEAMQL 375
>gi|226498374|ref|NP_001140668.1| uncharacterized protein LOC100272743 [Zea mays]
gi|194700496|gb|ACF84332.1| unknown [Zea mays]
gi|413956154|gb|AFW88803.1| hypothetical protein ZEAMMB73_191156 [Zea mays]
Length = 224
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 118/184 (64%), Gaps = 18/184 (9%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
MA +DM+LDDIIK+ KKS + RG R RG S G G RR P A
Sbjct: 1 MAETLDMTLDDIIKNNKKS------NPSSRGARRSRGVSAPGGGTGGVGPTRR-PFKRAG 53
Query: 60 -RPSSYTIAKSFRRTRNFPWQHDLFE-----DSLRAAGISGIEVGTKLYVSNLHPGVTND 113
R + Y K+ + WQHD++ +S +E G KLY+SNL GV+N+
Sbjct: 54 NRQAPYQPPKA----PDAAWQHDMYPAVAAGGGGGGGRVSALETGAKLYISNLDFGVSNE 109
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DI+ELFSE+G+LKR++I++D++GR G+AEVV+ARRSDA AA+K+Y+NV LDGKPMKIE+
Sbjct: 110 DIKELFSELGDLKRFSINYDRSGRSKGTAEVVFARRSDAVAAVKKYDNVQLDGKPMKIEI 169
Query: 174 VGTN 177
VGTN
Sbjct: 170 VGTN 173
>gi|42573738|ref|NP_974965.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009873|gb|AED97256.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 242
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 113/184 (61%), Gaps = 21/184 (11%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+T +DMSLDD+I + R+ RG G GP+ G G RR N
Sbjct: 1 MSTGLDMSLDDMI------------AKNRKSRG-GAGPARGTGSGSGPGPTRR----NNP 43
Query: 61 PSSYTIAKSFRRTRNFPWQHDLF----EDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
T + ++ W HD+F ED +GIE GTKLY+SNL GV N+DI+
Sbjct: 44 NRKSTRSAPYQSAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIK 103
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
ELF+E+GELKRY +HFD++GR G+AEVVY+RR DA AA+K+YN+V LDGKPMKIE+VGT
Sbjct: 104 ELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGT 163
Query: 177 NAEI 180
N +
Sbjct: 164 NLQT 167
>gi|167999562|ref|XP_001752486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696386|gb|EDQ82725.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 249
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 122/190 (64%), Gaps = 25/190 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M + +DMSLDD+IK+ K + R G G G GRG + A+RRG + A
Sbjct: 1 MTSALDMSLDDLIKTNKTATRGGRGGGGGGGGGGGRGAA---------PASRRGGATAA- 50
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGIS------GIEVGTKLYVSNLHPGVTNDD 114
A RR + WQHD++E+ L AA S GIE GTKLY+SNL GV+NDD
Sbjct: 51 ------ADGVRRDPDSTWQHDMYENFLPAAPSSGRGVTGGIETGTKLYISNLDYGVSNDD 104
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
I+ELF E+G+LKR +I++D++GR G+AEVV+ R+ DA +A+KRYNNV LDGKPMKIE++
Sbjct: 105 IKELFGEVGDLKRCSINYDRSGRSKGTAEVVFTRKPDAVSAMKRYNNVQLDGKPMKIEMI 164
Query: 175 GTN---AEIP 181
GTN A +P
Sbjct: 165 GTNLIAAPVP 174
>gi|242036141|ref|XP_002465465.1| hypothetical protein SORBIDRAFT_01g039330 [Sorghum bicolor]
gi|241919319|gb|EER92463.1| hypothetical protein SORBIDRAFT_01g039330 [Sorghum bicolor]
Length = 257
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 158/296 (53%), Gaps = 47/296 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
MA +DM+LDDIIK+ KKS G GR RG G GG R P A
Sbjct: 1 MAETLDMTLDDIIKNNKKSNSSSGGGRRSRGGSAP---GGGGGGGSGGVGPTRRPFKRAG 57
Query: 60 -RPSSYTIAKSFRRTRNFPWQHDLFE----DSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
R + Y K+ + WQHD++ +S +E GTKLY+SNL GV+N+D
Sbjct: 58 NRQAPYQPPKA----PDVAWQHDMYPAVAAGGGGGGRVSALETGTKLYISNLDFGVSNED 113
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
I+ELFSE+G+LKRY+I++D++GR G+AEVV+ARRSDA AA+K+YNNV LDGKPMKIE+V
Sbjct: 114 IKELFSELGDLKRYSINYDRSGRSKGTAEVVFARRSDAVAAVKKYNNVQLDGKPMKIEIV 173
Query: 175 GTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGR 234
GTN AAA+ P S G G R +++
Sbjct: 174 GTN-----------------------------TPTAAAAL---PVSNG--GHARNAARSA 199
Query: 235 GRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
RG R GGR G G +GK+ KSA++LD +L+ YHA+AMQ
Sbjct: 200 PRGAAPAGMPQRRPHQRGGRRGGGSGGGRRGKERSTPKSAEELDADLEKYHADAMQ 255
>gi|51490663|emb|CAG26902.1| ALY protein [Nicotiana benthamiana]
Length = 249
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 147/296 (49%), Gaps = 58/296 (19%)
Query: 3 THVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPS 62
+++D+SLDD+IK R KS R R R G + RR S A
Sbjct: 2 SNLDVSLDDLIK-RNKSSSSRNP--------RPRTSGSGSGTGSGGPSPRRRFPSRAANR 52
Query: 63 SYTIAKSFRRTRNFPWQHDLFEDSLRAA-------GISGIEVGTKLYVSNLHPGVTNDDI 115
S + + W H++F + A GISGIE G KL +SNL GV+N+DI
Sbjct: 53 SAPYSSGPVHAPDSTWDHNMFAEHAPAYPAARGAGGISGIETGIKLLISNLDYGVSNEDI 112
Query: 116 RELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
+ELFSE G++KRY+IH+DK+GR G+AEV+++RR DA AA+K+YNNV LDGKPMKIE G
Sbjct: 113 KELFSEAGDIKRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKKYNNVQLDGKPMKIEFAG 172
Query: 176 TNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRG 235
N P + + R R N P SQ R GG RR +G
Sbjct: 173 PNIGAP-----TLPPLRNRLYRNP---------------NPAPRSQQRGGGFRRPPRG-- 210
Query: 236 RGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDK-SADDLDKELDNYHAEAMQ 290
GRG R G + V+ +A+DLD +L+ YHAEAMQ
Sbjct: 211 -------------------GRGSMRKEGGRGRGRVENITAEDLDADLEKYHAEAMQ 247
>gi|302767862|ref|XP_002967351.1| hypothetical protein SELMODRAFT_87004 [Selaginella moellendorffii]
gi|300165342|gb|EFJ31950.1| hypothetical protein SELMODRAFT_87004 [Selaginella moellendorffii]
Length = 238
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 113/217 (52%), Gaps = 56/217 (25%)
Query: 78 WQHDLFEDSLRAAGI----SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
WQHD+FED G GIE GTKL++SNL GV+ DDI+ELFSE G+LKR A+HFD
Sbjct: 73 WQHDMFEDGFVGGGARTKPVGIETGTKLFISNLDHGVSTDDIKELFSEQGDLKRCAVHFD 132
Query: 134 KNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNG 193
++GR +A+VV+AR+ DA A+K YNNV LDGKPMKIE +GTN R +
Sbjct: 133 RSGRSKCTADVVFARKYDALKAMKHYNNVQLDGKPMKIECLGTNIATAFTPRYRI----- 187
Query: 194 RRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGG 253
RRK + GG G
Sbjct: 188 RRKPAI-----------------------------------------------AGGTKGS 200
Query: 254 RGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
+ G G+G+G PV KSA +LD +L+NYHAEAMQ
Sbjct: 201 QLGGAAGGKGKGGGKPVVKSAQELDADLENYHAEAMQ 237
>gi|94466657|emb|CAJ44457.1| ALY protein [Nicotiana benthamiana]
Length = 246
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 145/299 (48%), Gaps = 67/299 (22%)
Query: 3 THVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN---A 59
+++D+SLDD+IK K S + R GP R A R P S+
Sbjct: 2 SNLDVSLDDLIKRNKSSSSRNPRPRTSGSGSGSGGPGPRRRPNR--AAKRSAPYSSGPVH 59
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAA-------GISGIEVGTKLYVSNLHPGVTN 112
P S W HD+F + A GISGIE G KL +SNL GV+N
Sbjct: 60 APEST-------------WDHDMFAEHAPAYPAARGAGGISGIETGIKLLISNLDYGVSN 106
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
+DI+ELFSE G++KRY+IH+DK+GR G+AEV+++RR DA AA+K+YNNV LDGKPMKIE
Sbjct: 107 EDIKELFSEAGDIKRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKKYNNVQLDGKPMKIE 166
Query: 173 VVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQ 232
G N P + + R R N P SQ R GG RR +
Sbjct: 167 FAGPNIGAPA-----LPPIRNRLYRNP---------------NPAPRSQQRGGGFRRPPR 206
Query: 233 GRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDK-SADDLDKELDNYHAEAMQ 290
G GRG R G + + SA+DLD +L+ YH+EAM+
Sbjct: 207 G---------------------GRGSMRKEGGRGRGRGENISAEDLDADLEKYHSEAME 244
>gi|414866139|tpg|DAA44696.1| TPA: hypothetical protein ZEAMMB73_540613 [Zea mays]
Length = 205
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 123/217 (56%), Gaps = 38/217 (17%)
Query: 78 WQHDLFEDSLRAAG----ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
WQHD++ G +S +E GTKLY+SNL GV+NDDI+ELFSE+G+LKR++I +D
Sbjct: 21 WQHDMYPAVAAGGGGGGRVSALETGTKLYISNLDFGVSNDDIKELFSELGDLKRFSIIYD 80
Query: 134 KNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNG 193
++GR G+AEVV+ARRSDA AA+K+YNNV LDGKPMKIE+VGTN
Sbjct: 81 RSGRSKGTAEVVFARRSDAVAAVKKYNNVQLDGKPMKIEIVGTN---------------- 124
Query: 194 RRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGG 253
+ A A ++ G G R + + RG R GG
Sbjct: 125 -----------TPTASAALPVSNG-------GHARNAVRSAPRGAAPAGVPQRRPHQRGG 166
Query: 254 RGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
R G G +GK+ KSA++LD +L+ YHA+AMQ
Sbjct: 167 RRSGGSGGGRRGKERSKPKSAEELDADLEKYHADAMQ 203
>gi|168064322|ref|XP_001784112.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664363|gb|EDQ51086.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 265
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/302 (39%), Positives = 153/302 (50%), Gaps = 51/302 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRA--------RRGRGR-GRGPSGSVSGGRMTGAA 51
M + +DMSLDD+IK+ K + R G +RGR G +G SGG+++
Sbjct: 1 MTSALDMSLDDLIKTNKSATRGGRGGGGGRGTGSAPQRGRATIAAGTAGGYSGGKISEER 60
Query: 52 RRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVT 111
R +A F + + R G GIE GTKLY+SNL GV+
Sbjct: 61 VRQAQDSA----------------FQYTNHFIPAVGRGVG-GGIETGTKLYISNLDYGVS 103
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
NDDI+ELFSEIG+L+R +I++D++GR G+AEVV+ R+ DA A+KRYNNV LDGKPMKI
Sbjct: 104 NDDIKELFSEIGDLRRCSINYDRSGRSKGTAEVVFMRKPDALNAVKRYNNVQLDGKPMKI 163
Query: 172 EVVGTN---AEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLR 228
E++GTN IP V R R V S RG GS+ G R
Sbjct: 164 EIIGTNENSVSIPFARSNGAMAVYAGRARAVYPQS--------LPFARGSGSERGIGAFR 215
Query: 229 RSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEA 288
G RG GRGGG GG +K+ ++LDKEL+ YHAEA
Sbjct: 216 GRGGRGGGRGTVSRGGGRGGGRGGAPA--------------AEKTLEELDKELETYHAEA 261
Query: 289 MQ 290
MQ
Sbjct: 262 MQ 263
>gi|125543328|gb|EAY89467.1| hypothetical protein OsI_10999 [Oryza sativa Indica Group]
Length = 273
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 113/188 (60%), Gaps = 15/188 (7%)
Query: 1 MATHVDMSLDDIIKSRKKSE-RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPL--S 57
MA +DM+LDDIIK+ KK+ R G G G G GG R P S
Sbjct: 1 MAETLDMTLDDIIKNNKKANPSSGRGRRGSAAGGGGGGGGGVGGGGGGGVGPTRRPFKRS 60
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAG--------ISGIEVGTKLYVSNLHPG 109
R Y K+ WQHD++ D G +S IE GTKLY+SNL G
Sbjct: 61 GNRAGPYQPPKAPESA----WQHDMYSDVAAGGGGGSGGGGRVSAIETGTKLYISNLDFG 116
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPM 169
V+ +DI+ELFSE+G+LK+Y IH+D++GR G+AEVV+ARR DA AA+K+YNNV LDGKPM
Sbjct: 117 VSTEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVKKYNNVQLDGKPM 176
Query: 170 KIEVVGTN 177
KIE++GTN
Sbjct: 177 KIEILGTN 184
>gi|108707486|gb|ABF95281.1| RNA and export factor-binding protein, putative, expressed [Oryza
sativa Japonica Group]
gi|125585793|gb|EAZ26457.1| hypothetical protein OsJ_10345 [Oryza sativa Japonica Group]
gi|215701346|dbj|BAG92770.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765693|dbj|BAG87390.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767507|dbj|BAG99735.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 273
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 113/188 (60%), Gaps = 15/188 (7%)
Query: 1 MATHVDMSLDDIIKSRKKSE-RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPL--S 57
MA +DM+LDDIIK+ KK+ R G G G G GG R P S
Sbjct: 1 MAETLDMTLDDIIKNNKKANPSSGRGRRGSAAGGGGGGGGGVGGGGGGGVGPTRRPFKRS 60
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAG--------ISGIEVGTKLYVSNLHPG 109
R Y K+ WQHD++ D G +S IE GTKLY+SNL G
Sbjct: 61 GNRAGPYQPPKAPESA----WQHDMYSDVAAGGGGGSGGGGRVSAIETGTKLYISNLDFG 116
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPM 169
V+ +DI+ELFSE+G+LK+Y IH+D++GR G+AEVV+ARR DA AA+K+YNNV LDGKPM
Sbjct: 117 VSTEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVKKYNNVQLDGKPM 176
Query: 170 KIEVVGTN 177
KIE++GTN
Sbjct: 177 KIEILGTN 184
>gi|334187381|ref|NP_001190207.1| THO complex subunit 4 [Arabidopsis thaliana]
gi|7413642|emb|CAB85990.1| putative protein [Arabidopsis thaliana]
gi|332003103|gb|AED90486.1| THO complex subunit 4 [Arabidopsis thaliana]
Length = 290
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 119/190 (62%), Gaps = 17/190 (8%)
Query: 5 VDMSLDDIIKS-RKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSS 63
+DMSLDDIIKS RK + G GRG SGS SG A R G AR +
Sbjct: 5 LDMSLDDIIKSNRKPTGSRGRGGIGGGNNTGGRGGSGSNSGPSRRFANRVG----ARTAP 60
Query: 64 YTIAKSFRRTRNFPWQHDLF-EDSLRAAGI-----------SGIEVGTKLYVSNLHPGVT 111
Y+ ++ + WQ+D+F D+ AA S IE GTKLY+SNL GV+
Sbjct: 61 YSRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDYGVS 120
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
N+DI+ELFSE+G+LKRY IH+D++GR G+AEVV++RR DA AA+KRYNNV LDGK MKI
Sbjct: 121 NEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMKI 180
Query: 172 EVVGTNAEIP 181
E+VGTN P
Sbjct: 181 EIVGTNLSAP 190
>gi|30679669|ref|NP_195873.2| THO complex subunit 4 [Arabidopsis thaliana]
gi|22655123|gb|AAM98152.1| putative protein [Arabidopsis thaliana]
gi|30023796|gb|AAP13431.1| At5g02530 [Arabidopsis thaliana]
gi|332003102|gb|AED90485.1| THO complex subunit 4 [Arabidopsis thaliana]
Length = 292
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 119/190 (62%), Gaps = 17/190 (8%)
Query: 5 VDMSLDDIIKS-RKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSS 63
+DMSLDDIIKS RK + G GRG SGS SG A R G AR +
Sbjct: 5 LDMSLDDIIKSNRKPTGSRGRGGIGGGNNTGGRGGSGSNSGPSRRFANRVG----ARTAP 60
Query: 64 YTIAKSFRRTRNFPWQHDLF-EDSLRAAGI-----------SGIEVGTKLYVSNLHPGVT 111
Y+ ++ + WQ+D+F D+ AA S IE GTKLY+SNL GV+
Sbjct: 61 YSRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDYGVS 120
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
N+DI+ELFSE+G+LKRY IH+D++GR G+AEVV++RR DA AA+KRYNNV LDGK MKI
Sbjct: 121 NEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMKI 180
Query: 172 EVVGTNAEIP 181
E+VGTN P
Sbjct: 181 EIVGTNLSAP 190
>gi|296086266|emb|CBI31707.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 110/177 (62%), Gaps = 18/177 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M +DMSLD+II+++KKS G G SG A R G R
Sbjct: 1 MPDPLDMSLDEIIRNKKKSA------------GVSSNVRGIGSGPGPGPARRFGNRELLR 48
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
+ Y++A F+ W+ ++F G+S +E GTKLY+SNL GV+NDDI+ELFS
Sbjct: 49 TTPYSVAPVFQVLEA-AWKQEVF-----TGGVSTMETGTKLYISNLEYGVSNDDIKELFS 102
Query: 121 EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
E+GELK+Y+IH+DK+G G+ EVV+ R++DA AA+KRYNNV LDGKP KI+++G N
Sbjct: 103 EVGELKQYSIHYDKSGISKGTGEVVFLRQTDALAAIKRYNNVQLDGKPQKIDLIGAN 159
>gi|357161377|ref|XP_003579071.1| PREDICTED: RNA and export factor-binding protein 2-like
[Brachypodium distachyon]
Length = 259
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 81/96 (84%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG+E GTKLY+SNL V+N+DI+ELFSE+G+LKRY+I++DK+GR G+AEVV+ARRSDA
Sbjct: 90 SGVETGTKLYISNLDYNVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFARRSDA 149
Query: 153 FAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNV 188
AALKRYNNV LDGKPM+IEV+GTN E P A +
Sbjct: 150 LAALKRYNNVQLDGKPMQIEVIGTNIEAPAPAIFTI 185
>gi|326507090|dbj|BAJ95622.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 260
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 145/295 (49%), Gaps = 40/295 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDII K R RGR P+ + SGG R + R
Sbjct: 1 MADTLDMSLDDIITKNKPHHR----------RGR-HNPASAASGGSARPRRRFRSRAATR 49
Query: 61 PSSYTIAKSFRRT---RNFPWQHDLFEDSL-RAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+A + + + P S+ S ++ TKLY+SNL V+N+DI+
Sbjct: 50 ----AVAAPYHQLSLQQQVPPAFGYVAQSMAMVTAPSALDSPTKLYISNLDYNVSNEDIK 105
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
ELFSE+G+++RY+I++DK+GR G+AEVV++ RS A AALK+YNNV LDGKPMKIEV+GT
Sbjct: 106 ELFSEMGDIQRYSINYDKSGRSKGTAEVVFSARSSAVAALKKYNNVHLDGKPMKIEVIGT 165
Query: 177 NAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGR 236
N E P + GN + GP G R G
Sbjct: 166 NIEAP-----------APIPAIFALAPPPGNFSFPS--KSGPAMGVGGRGWSRGGGGFSA 212
Query: 237 GQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQI 291
G G G GRG+G GRG ++ SA DLD +LD YH+ AM+I
Sbjct: 213 RSGGGFGGRGRVRSDHGRGKG---GRGN-----LEISAADLDADLDKYHSAAMEI 259
>gi|33146678|dbj|BAC80073.1| putative RNA and export factor binding protein [Oryza sativa
Japonica Group]
Length = 323
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 120/216 (55%), Gaps = 49/216 (22%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
+E GTKL++SNL PGVT DD++ELFSEIGELKRY++++DK+G+ G+AEVV+AR+ DA
Sbjct: 135 LETGTKLHISNLDPGVTVDDVQELFSEIGELKRYSVNYDKDGKSQGTAEVVFARKVDALE 194
Query: 155 ALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAI 214
A+KRY+ V+LDG PMKI+++G N+E T M +
Sbjct: 195 AIKRYDGVILDGNPMKIDLIGNNSE------------------TSPMPPTAPLLYNPPFP 236
Query: 215 NRGPGSQGRRGGLR-RSSQGRGRGQGQGRGRGRGGGGGG-------------------GR 254
N P S RRGG R + QG GR G +G GGG G G+
Sbjct: 237 NY-PNSVPRRGGQRGQFHQGNGR---PGNSQGIGGGPRGFQGSGRPGSGSQGGGGCSQGK 292
Query: 255 GRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
RG R R + KSA DLD ELD YHAEA++
Sbjct: 293 TRGNERSR-------IQKSAADLDAELDQYHAEAVK 321
>gi|297600721|ref|NP_001049725.2| Os03g0278300 [Oryza sativa Japonica Group]
gi|255674403|dbj|BAF11639.2| Os03g0278300, partial [Oryza sativa Japonica Group]
Length = 238
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 83/108 (76%), Gaps = 8/108 (7%)
Query: 78 WQHDLFEDSLRAAG--------ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYA 129
WQHD++ D G +S IE GTKLY+SNL GV+ +DI+ELFSE+G+LK+Y
Sbjct: 42 WQHDMYSDVAAGGGGGSGGGGRVSAIETGTKLYISNLDFGVSTEDIKELFSELGDLKKYV 101
Query: 130 IHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
IH+D++GR G+AEVV+ARR DA AA+K+YNNV LDGKPMKIE++GTN
Sbjct: 102 IHYDRSGRSKGTAEVVFARRGDAVAAVKKYNNVQLDGKPMKIEILGTN 149
>gi|302753882|ref|XP_002960365.1| hypothetical protein SELMODRAFT_74080 [Selaginella moellendorffii]
gi|300171304|gb|EFJ37904.1| hypothetical protein SELMODRAFT_74080 [Selaginella moellendorffii]
Length = 122
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 82/116 (70%), Gaps = 4/116 (3%)
Query: 78 WQHDLFEDSLRAAGI----SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
WQHD+FED G GIE GTKL++SNL GV+ DDI+ELFSE G+LKR A+HFD
Sbjct: 1 WQHDMFEDGFVGGGARTKPVGIETGTKLFISNLDHGVSTDDIKELFSEQGDLKRCAVHFD 60
Query: 134 KNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVT 189
++GR +A+VV+AR+ DA A+K YNNV LDGKPMKIE +GTN AR +T
Sbjct: 61 RSGRSKCTADVVFARKYDALKAMKHYNNVQLDGKPMKIECLGTNIATAFAARYVLT 116
>gi|297810351|ref|XP_002873059.1| hypothetical protein ARALYDRAFT_487031 [Arabidopsis lyrata subsp.
lyrata]
gi|297318896|gb|EFH49318.1| hypothetical protein ARALYDRAFT_487031 [Arabidopsis lyrata subsp.
lyrata]
Length = 290
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 116/194 (59%), Gaps = 26/194 (13%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGG---RMTG--AARRGPLSNA 59
+DMSLDDIIKS +K RG+G G G + G R AR P S
Sbjct: 5 LDMSLDDIIKSNRKPTGSRGRGGIGGGNNTGGRGGSGSNSGPSRRFANRVGARTAPYS-- 62
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLF-EDSLRAAGI-----------SGIEVGTKLYVSNLH 107
RP ++ + WQ+D+F D+ AA S IE GTKLY+SNL
Sbjct: 63 RPIQ-------QQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLD 115
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
GV+N+DI+ELFSE+G+LKRY IH+D++GR G+AEVV++RR DA AA+KRYNNV LDGK
Sbjct: 116 YGVSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGK 175
Query: 168 PMKIEVVGTNAEIP 181
MKIE+VGTN P
Sbjct: 176 LMKIEIVGTNLSAP 189
>gi|326505472|dbj|BAJ95407.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512088|dbj|BAJ96025.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527861|dbj|BAK08160.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 273
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 127/214 (59%), Gaps = 33/214 (15%)
Query: 78 WQHDLFEDS----LRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
WQHD++ D+ +S IE GTKL+++NL GV+ +D++ELFSE+G+LKR +I+FD
Sbjct: 80 WQHDMYSDASARGGGGGRVSAIETGTKLFITNLDFGVSTEDLKELFSELGDLKRCSINFD 139
Query: 134 KNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNG 193
++GR G+AEV++ARR DA AA+K+YNNV LDGKPMKIE++GTN A + NG
Sbjct: 140 RSGRSKGTAEVIFARRGDAVAAIKKYNNVQLDGKPMKIEILGTNTPT---APAALPTNNG 196
Query: 194 RRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGG 253
R V ++ G + Q R R +G GRG GGGGG G
Sbjct: 197 SYARNVAKSAPRGVSASL-------------------PQNRPRARGGR-GRGGGGGGGSG 236
Query: 254 RGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAE 287
G RG+ R Q +SA++LD EL+ YHA+
Sbjct: 237 SGGRRGKERSQP------RSAEELDAELEKYHAQ 264
>gi|357120113|ref|XP_003561774.1| PREDICTED: THO complex subunit 4-like, partial [Brachypodium
distachyon]
Length = 230
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 83/104 (79%), Gaps = 4/104 (3%)
Query: 78 WQHDLFEDSLRAAG----ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
WQHD++ D G +S IE GTKL+++NL GV+ +D++ELFSE+G+LKR +IH+D
Sbjct: 36 WQHDMYSDVPAGRGGSGRVSAIETGTKLFITNLEFGVSTEDVKELFSELGDLKRCSIHYD 95
Query: 134 KNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
++GR G+AEV++ARR DA AA+K+YNNV LDGKPMKIE++GTN
Sbjct: 96 RSGRSKGTAEVIFARRGDAVAAMKKYNNVQLDGKPMKIEILGTN 139
>gi|326506412|dbj|BAJ86524.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 83/104 (79%), Gaps = 4/104 (3%)
Query: 78 WQHDLFEDS----LRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
WQHD++ D+ +S IE GTKL+++NL GV+ +D++ELFSE+G+LKR +I+FD
Sbjct: 18 WQHDMYSDASARGGGGGRVSAIETGTKLFITNLDFGVSTEDLKELFSELGDLKRCSINFD 77
Query: 134 KNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
++GR G+AEV++ARR DA AA+K+YNNV LDGKPMKIE++GTN
Sbjct: 78 RSGRSKGTAEVIFARRGDAVAAIKKYNNVQLDGKPMKIEILGTN 121
>gi|42568662|ref|NP_200803.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009872|gb|AED97255.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 178
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 76/87 (87%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+GIE GTKLY+SNL GV N+DI+ELF+E+GELKRY +HFD++GR G+AEVVY+RR DA
Sbjct: 16 AGIETGTKLYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDA 75
Query: 153 FAALKRYNNVLLDGKPMKIEVVGTNAE 179
AA+K+YN+V LDGKPMKIE+VGTN +
Sbjct: 76 LAAVKKYNDVQLDGKPMKIEIVGTNLQ 102
>gi|357111105|ref|XP_003557355.1| PREDICTED: RNA and export factor-binding protein 2-like
[Brachypodium distachyon]
Length = 253
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 110/194 (56%), Gaps = 27/194 (13%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
+E GTKL++SNL P VT +D++ELFSE+GELKRY++++DK+G+ GSAEVV+AR+ DA
Sbjct: 83 LETGTKLHISNLKPSVTVEDVQELFSEVGELKRYSVNYDKDGKSQGSAEVVFARKVDALD 142
Query: 155 ALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAI 214
A++RYN VLLDGKPM+IE+VG+ +E P A + + R
Sbjct: 143 AIERYNGVLLDGKPMEIELVGSKSEPPSTAPL-------KYNRAF------------PNY 183
Query: 215 NRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSA 274
N P S +RG G +G G GR G G G G +N V SA
Sbjct: 184 NAIPNSVPQRGS--------GGQRGIHPGNGRPGNTGQGGGGRGQARARGHDRNRVQASA 235
Query: 275 DDLDKELDNYHAEA 288
DLD EL+ YHA A
Sbjct: 236 ADLDAELEKYHAAA 249
>gi|242047942|ref|XP_002461717.1| hypothetical protein SORBIDRAFT_02g007020 [Sorghum bicolor]
gi|241925094|gb|EER98238.1| hypothetical protein SORBIDRAFT_02g007020 [Sorghum bicolor]
Length = 255
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 115/206 (55%), Gaps = 47/206 (22%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
+E GTKL++SNL PGVT +D++ELFSE+GELKRY++++DK+GR G+AEVV+AR+ DA
Sbjct: 85 LETGTKLHISNLDPGVTVEDVQELFSEVGELKRYSMNYDKDGRSKGTAEVVFARKVDALD 144
Query: 155 ALKRYNNVLLDGKPMKIEVVGTNAEI----------PLQARVNVTGVNGRRKRTVVMTSG 204
A+KRYN VLLDGKPM +E++G N E PLQ ++
Sbjct: 145 AIKRYNGVLLDGKPMNLELIGNNVEPPPMPPLIPNRPLQNYNDI---------------- 188
Query: 205 SGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQ 264
Q +RGG RR+ QG GR GR GG G+GRG R R
Sbjct: 189 -----------HISVPQSQRGGQRRAPQGNGR---PGRSSQSSGGRRQGKGRGLDRNRTA 234
Query: 265 GKKNPVDKSADDLDKELDNYHAEAMQ 290
SA DLD ELD YHA A++
Sbjct: 235 -------ISAADLDAELDKYHAAAVK 253
>gi|224113973|ref|XP_002332459.1| predicted protein [Populus trichocarpa]
gi|222832494|gb|EEE70971.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 75/85 (88%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
S IE GTKLY+SNL GV+ +DI+ELFSEIG+LKRY++H+D++GR G+AE+V+ARR DA
Sbjct: 2 SSIETGTKLYISNLDFGVSTEDIKELFSEIGDLKRYSVHYDRSGRSEGTAEIVFARREDA 61
Query: 153 FAALKRYNNVLLDGKPMKIEVVGTN 177
+A+KRYNNV LDGKPMKIE+VGTN
Sbjct: 62 VSAVKRYNNVQLDGKPMKIEIVGTN 86
>gi|414588875|tpg|DAA39446.1| TPA: RNA and export factor-binding protein 2 [Zea mays]
Length = 250
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 150/294 (51%), Gaps = 54/294 (18%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M++ +DMSLDD+IK K R + SG AA P
Sbjct: 1 MSSGLDMSLDDLIKQSKS-----------RPKANPASSSGPARRAHPARAAPYPP----- 44
Query: 61 PSSYTIAKSFRRTRNFPW------QHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
+A R T + P+ + + A +E G KL++SNL GVT +D
Sbjct: 45 -----VAPKARATADSPYGVYSEQIAAIAAAAPLPAKARSLETGMKLHISNLDSGVTVED 99
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
++ELFSE+GELKRY++++DK+GR G+AEVV+AR+ DA A+KRYN VLLDGKPM +E++
Sbjct: 100 VQELFSEVGELKRYSMNYDKDGRSKGTAEVVFARKVDALDAIKRYNGVLLDGKPMNLELI 159
Query: 175 GTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGR 234
G N E P + ++ R + N ++ + Q +R G RR+ Q
Sbjct: 160 GNNVEPPPLPPL----IHNRPLQNY-------NDIHSSVL------QSQRNGQRRAPQVN 202
Query: 235 GRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEA 288
GRG GR GG G GRGRG+ R R P+ SA DLD ELD YHA A
Sbjct: 203 GRG---GRSSQTSGGRGQGRGRGQDRNR-----TPI--SASDLDAELDKYHAAA 246
>gi|343172826|gb|AEL99116.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 163
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 76/87 (87%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRS 150
G S IE GTKLY+SNL GV+ DD++ELFSE+G+LKRY +H+D++GR G+AEVVY+RR+
Sbjct: 3 GESSIETGTKLYISNLDYGVSTDDVKELFSEVGDLKRYTVHYDRSGRSKGTAEVVYSRRN 62
Query: 151 DAFAALKRYNNVLLDGKPMKIEVVGTN 177
DA AA+KRYNNV LDGKP+KIE+VGTN
Sbjct: 63 DALAAVKRYNNVELDGKPIKIEIVGTN 89
>gi|356499657|ref|XP_003518653.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
max]
Length = 260
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 143/305 (46%), Gaps = 65/305 (21%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDI K R + S R T P AR
Sbjct: 1 MAGGIDMSLDDIKK---------------------RSAAAVASRRRFTVV--HNP---AR 34
Query: 61 PSSYTIAKSFRRTRN--FPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
+ Y I + +++ FP E L +G + IE GTKLY+SNL GVTNDDI+ L
Sbjct: 35 TTPYPIPQVRQQSMVALFP------EMVLEESGAAKIESGTKLYLSNLDHGVTNDDIKLL 88
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
FSE GELK Y IH+D++GR G+AEVV+ R SDA A+K+YNN+ LDGKP++IE+VGT+
Sbjct: 89 FSEEGELKSYTIHYDQSGRSKGTAEVVFVRHSDALLAIKKYNNMRLDGKPLQIELVGTSL 148
Query: 179 EIPLQARVNVTGVNGRRKRTVVMT------SGSGNAGGAAAINRGPGSQG---RRGGLR- 228
P A + + GR T SG N + RG G + R+ R
Sbjct: 149 ATPAVAPLCQNNLMGRPNDVHFSTRGRVGDSGFHNDFAQGYLPRGRGEEKDHIRKVSFRD 208
Query: 229 --RSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHA 286
S + R Q Q R + G G +A DLD +L+ YH
Sbjct: 209 LDHSFERFHRTQSQ-RSYAKVNGNFGK------------------VTAKDLDDDLERYHL 249
Query: 287 EAMQI 291
EA +I
Sbjct: 250 EAKRI 254
>gi|343172824|gb|AEL99115.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 163
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 76/87 (87%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRS 150
G S IE GTK+Y+SNL GV+ DD++ELFSE+G+LKRY +H+D++GR G+AEVVY+RR+
Sbjct: 3 GESSIETGTKIYISNLDYGVSTDDVKELFSEVGDLKRYTVHYDRSGRSKGTAEVVYSRRN 62
Query: 151 DAFAALKRYNNVLLDGKPMKIEVVGTN 177
DA AA+KRYNNV LDGKP+KIE+VGTN
Sbjct: 63 DALAAVKRYNNVELDGKPIKIEIVGTN 89
>gi|223947451|gb|ACN27809.1| unknown [Zea mays]
gi|413956155|gb|AFW88804.1| hypothetical protein ZEAMMB73_191156 [Zea mays]
Length = 182
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 112/201 (55%), Gaps = 38/201 (18%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSD 151
+S +E G KLY+SNL GV+N+DI+ELFSE+G+LKR++I++D++GR G+AEVV+ARRSD
Sbjct: 16 VSALETGAKLYISNLDFGVSNEDIKELFSELGDLKRFSINYDRSGRSKGTAEVVFARRSD 75
Query: 152 AFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGA 211
A AA+K+Y+NV LDGKPMKIE+VGTN A G + R NA +
Sbjct: 76 AVAAVKKYDNVQLDGKPMKIEIVGTNTPAAAAAHPVPNGGHAR------------NAARS 123
Query: 212 AAINRGPG--SQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNP 269
A + P SQ R G +G+ R +
Sbjct: 124 APKDAAPAGMSQHRTHQRGGRRAAGSGGGRRGKERSKP---------------------- 161
Query: 270 VDKSADDLDKELDNYHAEAMQ 290
KS ++LD +L+ YHA+AMQ
Sbjct: 162 --KSTEELDADLEKYHADAMQ 180
>gi|108707487|gb|ABF95282.1| RNA and export factor-binding protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108707488|gb|ABF95283.1| RNA and export factor-binding protein, putative, expressed [Oryza
sativa Japonica Group]
gi|215693824|dbj|BAG89023.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704293|dbj|BAG93133.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 193
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 75/86 (87%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSD 151
+S IE GTKLY+SNL GV+ +DI+ELFSE+G+LK+Y IH+D++GR G+AEVV+ARR D
Sbjct: 19 VSAIETGTKLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGD 78
Query: 152 AFAALKRYNNVLLDGKPMKIEVVGTN 177
A AA+K+YNNV LDGKPMKIE++GTN
Sbjct: 79 AVAAVKKYNNVQLDGKPMKIEILGTN 104
>gi|125575903|gb|EAZ17125.1| hypothetical protein OsJ_32627 [Oryza sativa Japonica Group]
Length = 177
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 106/184 (57%), Gaps = 37/184 (20%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS----NAR 60
+DMSLDD+I ++ K RR R G PS S R + P A
Sbjct: 7 LDMSLDDLITNKYK----------RRSRP-GPAPSARRSHSRAATRSAAAPYHAITFQAP 55
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
P++Y + + +E GTKLY+SNL V+N+DI+ELFS
Sbjct: 56 PTAY----------------------VHPTPAANVETGTKLYISNLDYAVSNEDIKELFS 93
Query: 121 EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI 180
E+G++KRY+I++D++GR G+AEVV++R+SDA AA+KRYNNV LDGKPMK+E++G N E
Sbjct: 94 EVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVKRYNNVQLDGKPMKLELIGINIEP 153
Query: 181 PLQA 184
P A
Sbjct: 154 PPPA 157
>gi|115486846|ref|NP_001065229.1| Os12g0100100 [Oryza sativa Japonica Group]
gi|77553349|gb|ABA96145.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113648417|dbj|BAF28929.1| Os12g0100100 [Oryza sativa Japonica Group]
gi|215692544|dbj|BAG87964.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768790|dbj|BAH01019.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 228
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 106/184 (57%), Gaps = 37/184 (20%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS----NAR 60
+DMSLDD+I ++ K RR R G PS S R + P A
Sbjct: 7 LDMSLDDLITNKYK----------RRSRP-GPAPSARRSHSRAATRSAAAPYHAITFQAP 55
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
P++Y + + +E GTKLY+SNL V+N+DI+ELFS
Sbjct: 56 PTAY----------------------VHPTPAANVETGTKLYISNLDYAVSNEDIKELFS 93
Query: 121 EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI 180
E+G++KRY+I++D++GR G+AEVV++R+SDA AA+KRYNNV LDGKPMK+E++G N E
Sbjct: 94 EVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVKRYNNVQLDGKPMKLELIGINIEP 153
Query: 181 PLQA 184
P A
Sbjct: 154 PPPA 157
>gi|297611011|ref|NP_001065221.2| Os11g0100200 [Oryza sativa Japonica Group]
gi|77548276|gb|ABA91073.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|218190893|gb|EEC73320.1| hypothetical protein OsI_07508 [Oryza sativa Indica Group]
gi|222615348|gb|EEE51480.1| hypothetical protein OsJ_32621 [Oryza sativa Japonica Group]
gi|255679677|dbj|BAF27356.2| Os11g0100200 [Oryza sativa Japonica Group]
Length = 224
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 107/184 (58%), Gaps = 34/184 (18%)
Query: 2 ATHVDMSLDDIIKSR-KKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
A +DMSLDD+I ++ K+ R ARR R + + +T A
Sbjct: 3 ADSLDMSLDDLITNKYKRRSRPDPAPSARRFHSRAATRAAAAPYHAITF--------QAP 54
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
P++YT + +E GTKL++SNL V+N+DI+ELFS
Sbjct: 55 PTAYT-------------------------HPTPVETGTKLHISNLDYAVSNEDIKELFS 89
Query: 121 EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI 180
E+G++KRY+I++DK+GR G+AEVV++R+SDA AA+KRYNNV LDGKPMK+E++G N E
Sbjct: 90 EVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVKRYNNVQLDGKPMKLELIGINIEP 149
Query: 181 PLQA 184
P A
Sbjct: 150 PPPA 153
>gi|224112811|ref|XP_002316299.1| predicted protein [Populus trichocarpa]
gi|222865339|gb|EEF02470.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 146/303 (48%), Gaps = 66/303 (21%)
Query: 1 MATHVDMSLDDIIKSRKK-----SERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGP 55
M++ +DMSLDD+I+ K+ S+ A G G GP V RR P
Sbjct: 1 MSSLLDMSLDDLIRKGKENGGRDSDFRGSGRGAGSGSVLGPGPDRLV--------FRRDP 52
Query: 56 LSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDI 115
RP Y++ R + Q ++ L A G KLY+SNL GV+N+DI
Sbjct: 53 ---TRPKPYSV----RPVQVMQVQ----QEPLMLAASEGSNGEAKLYISNLDYGVSNEDI 101
Query: 116 RELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
+ LFSE+GEL RY++H+D +GR G+AEVV++R++DA AA++RYNNV LDGKP+KIE+VG
Sbjct: 102 KVLFSEVGELLRYSLHYDMSGRSKGTAEVVFSRQTDALAAIRRYNNVQLDGKPLKIELVG 161
Query: 176 TNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINR------GPGSQGRRGGLRR 229
VNV +T+ + G +++ G G
Sbjct: 162 ----------VNVITPVPVTVPVTAITNVANPNGAVRSVHERIGARGRGHGGGAGGRGGG 211
Query: 230 SSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDK-SADDLDKELDNYHAEA 288
S Q RGQGQ R R V+K +A+ LD +LD YH EA
Sbjct: 212 SVQEFARGQGQVRRR-------------------------VEKLTAEALDSDLDKYHFEA 246
Query: 289 MQI 291
M++
Sbjct: 247 MKL 249
>gi|218190891|gb|EEC73318.1| hypothetical protein OsI_07506 [Oryza sativa Indica Group]
Length = 226
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 108/184 (58%), Gaps = 34/184 (18%)
Query: 2 ATHVDMSLDDIIKSR-KKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
A +DMSLDD+I ++ K+ R ARR R + + +T A
Sbjct: 3 ADSLDMSLDDLITNKYKRRSRPDPAPSARRFHSRAATRAAAAPYHAITF--------QAP 54
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
P++YT H + +E GTKL++SNL V+N+DI+ELFS
Sbjct: 55 PTAYT--------------HP-----------TPVETGTKLHISNLDYAVSNEDIKELFS 89
Query: 121 EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI 180
E+G++KRY+I++DK+GR G+AEVV++R+SDA AA+KRYNNV LDGKPMK+E++G N E
Sbjct: 90 EVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVKRYNNVQLDGKPMKLELIGINIEP 149
Query: 181 PLQA 184
P A
Sbjct: 150 PPPA 153
>gi|212722820|ref|NP_001132074.1| uncharacterized protein LOC100193488 [Zea mays]
gi|194693354|gb|ACF80761.1| unknown [Zea mays]
gi|195640536|gb|ACG39736.1| THO complex subunit 4 [Zea mays]
gi|414884084|tpg|DAA60098.1| TPA: THO complex subunit 4 isoform 1 [Zea mays]
gi|414884085|tpg|DAA60099.1| TPA: THO complex subunit 4 isoform 2 [Zea mays]
Length = 249
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 107/197 (54%), Gaps = 27/197 (13%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAF 153
+E GTKL++SNL GVT +D++ELFSE+GELKRY++++DK+GR G+ EVV+AR+ DA
Sbjct: 78 SLETGTKLHISNLDSGVTIEDVQELFSEVGELKRYSMNYDKDGRSKGTVEVVFARKVDAL 137
Query: 154 AALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAA 213
A+KRYN VLLDGKPM +E++G N E P V ++ R + S
Sbjct: 138 DAIKRYNGVLLDGKPMNLELIGNNVEPPPMPPV----IHSRPLQNYNDIHSS-------- 185
Query: 214 INRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKS 273
Q +RGG RR QG GRG G +N S
Sbjct: 186 -----MPQSQRGGQRRVPQGNGRGGRS----------SQSSGGRGQGKGRGQDRNRTTIS 230
Query: 274 ADDLDKELDNYHAEAMQ 290
A DLD ELD YHA A++
Sbjct: 231 AADLDAELDKYHAAAVK 247
>gi|410917420|ref|XP_003972184.1| PREDICTED: RNA and export factor-binding protein 2-like [Takifugu
rubripes]
Length = 232
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 101/183 (55%), Gaps = 15/183 (8%)
Query: 1 MATHVDMSLDDIIKSRKK--SERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA V+MSLDDIIK KK S RE G R GR GR PS RR
Sbjct: 1 MADKVNMSLDDIIKLNKKAGSGREGGSSRPT-GRSSGRRPSRPARD-------RRDNFQR 52
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
R YT + R P WQHDLFE+ S E KL VSNL GV++ D+R
Sbjct: 53 ERNDRYT---PYTRPSELPDKWQHDLFEEHANGPQSSEAEGSAKLLVSNLDFGVSDSDLR 109
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
ELF+E G LK ++H+D++GR G+A+V + ++DA ALK+YN V LDG PMKI+ V +
Sbjct: 110 ELFAEFGPLKEASVHYDRSGRSKGTADVHFELKADALKALKQYNGVPLDGHPMKIQQVTS 169
Query: 177 NAE 179
E
Sbjct: 170 QVE 172
>gi|47223958|emb|CAG06135.1| unnamed protein product [Tetraodon nigroviridis]
Length = 227
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 110/193 (56%), Gaps = 15/193 (7%)
Query: 1 MATHVDMSLDDIIKSRKKSERER-GQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA 59
MA V+MSLDDIIK KK+ R R G A GR GR PS R R G +
Sbjct: 1 MADKVNMSLDDIIKLNKKAGRGREGGASAPAGRSSGRRPSRPARD-RRNNFQREG---DN 56
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
R + YT R P WQHD+FED A E KL VSNL GV++ D+RE
Sbjct: 57 RYTPYT------RPSELPDKWQHDMFEDHEDGAPAGEAEGSAKLLVSNLDFGVSDSDLRE 110
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LF+E G LK +IH+D++GR G+A+V + ++DA A+K+YN V LDG+PMKI+ V +
Sbjct: 111 LFAEFGPLKEASIHYDRSGRSKGTADVHFQHKADAIKAMKQYNGVPLDGQPMKIQQVTSG 170
Query: 178 AEIPLQARVNVTG 190
E ++R + +G
Sbjct: 171 QET--KSRTSTSG 181
>gi|218199342|gb|EEC81769.1| hypothetical protein OsI_25456 [Oryza sativa Indica Group]
Length = 336
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 74/85 (87%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
+E GTKL++SNL PGVT DD++ELFSEIGELKRY++++DK+G+ G+AEVV+AR+ DA
Sbjct: 86 LETGTKLHISNLDPGVTVDDVQELFSEIGELKRYSVNYDKDGKSQGTAEVVFARKVDALE 145
Query: 155 ALKRYNNVLLDGKPMKIEVVGTNAE 179
A+KRY+ V+LDG PMKI+++G N+E
Sbjct: 146 AIKRYDGVILDGNPMKIDLIGNNSE 170
>gi|21356157|ref|NP_651968.1| RNA and export factor binding protein 1 [Drosophila melanogaster]
gi|5679350|gb|AAD46930.1|AF172637_1 LD24793p [Drosophila melanogaster]
gi|7298863|gb|AAF54070.1| RNA and export factor binding protein 1 [Drosophila melanogaster]
gi|220953584|gb|ACL89335.1| Aly-PA [synthetic construct]
Length = 266
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 150/298 (50%), Gaps = 52/298 (17%)
Query: 1 MATHVDMSLDDIIKS---RKKSERERG-QGRARRGRGRGRGPSGSVSGG-------RMTG 49
M ++MSLDDIIKS +KK + RG G AR+ G+ R G+ GG R G
Sbjct: 1 MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKTGGQQRFAGGARRGGANAGGSPRKPG 60
Query: 50 AARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPG 109
+ +GP + AK R N W+HD+++ R A + G T+L V NL G
Sbjct: 61 SVLKGPRGGVAAGAVQKAKFPRGDVNSAWKHDMYDGPKRGA-VGGGSGPTRLIVGNLDYG 119
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPM 169
V+N DI+ELF++ G +K+ A+H+D++GR G+A+V++ RR+DA A+K+Y+ V LDG+PM
Sbjct: 120 VSNTDIKELFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPM 179
Query: 170 KIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTS---GSGNAGGAAAINRGPGSQGRRGG 226
I++ ++ + L V T V RR TS G G AGG A R G
Sbjct: 180 TIQLAVSDVAV-LTRPVAATDVK-RRVGGTAPTSFKRGGGQAGGTA-----------RRG 226
Query: 227 LRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
+R G+ GQ R R K P +A++LD ELD+Y
Sbjct: 227 FKRPVGGKPAAGGQRRER----------------------KAP--PTAEELDAELDSY 260
>gi|194899179|ref|XP_001979138.1| GG10124 [Drosophila erecta]
gi|190650841|gb|EDV48096.1| GG10124 [Drosophila erecta]
Length = 266
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 149/297 (50%), Gaps = 50/297 (16%)
Query: 1 MATHVDMSLDDIIKS---RKKSERERG-QGRARRGRGRGRGPSGSVSGG-------RMTG 49
M ++MSLDDIIKS +KK + RG G AR+ G+ R G+ GG R G
Sbjct: 1 MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKPGGQQRTAGGARRGGASAGGSPRKPG 60
Query: 50 AARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPG 109
+A +GP + AK R N W+HD+++ R A + G T+L V NL G
Sbjct: 61 SALKGPRGGVAGGAVQKAKFPRGDVNSAWKHDMYDGPKRGA-VGGGSGPTRLIVGNLDYG 119
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPM 169
V+N DI+ELF++ G +K+ A+H+D++GR G+A+V++ RR+DA A+K+Y+ V LDG+PM
Sbjct: 120 VSNTDIKELFNDFGPMKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPM 179
Query: 170 KIEVVGTNAEIPLQARVNVTGVNGRR--KRTVVMTSGSGNAGGAAAINRGPGSQGRRGGL 227
I++ ++ + L V T V R + G G AGG+ R G
Sbjct: 180 TIQLAVSDVAV-LTRPVTATDVKRRVGGAASAPFKRGGGQAGGSP-----------RRGF 227
Query: 228 RRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
+R G+ GQ R R K P +A++LD ELD+Y
Sbjct: 228 KRPVGGKPAAGGQRRER----------------------KAP--PTAEELDAELDSY 260
>gi|222636721|gb|EEE66853.1| hypothetical protein OsJ_23644 [Oryza sativa Japonica Group]
Length = 194
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 74/86 (86%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAF 153
+E GTKL++SNL PGVT DD++ELFSEIGELKRY++++DK+G+ G+AEVV+AR+ DA
Sbjct: 81 SLETGTKLHISNLDPGVTVDDVQELFSEIGELKRYSVNYDKDGKSQGTAEVVFARKVDAL 140
Query: 154 AALKRYNNVLLDGKPMKIEVVGTNAE 179
A+KRY+ V+LDG PMKI+++G N+E
Sbjct: 141 EAIKRYDGVILDGNPMKIDLIGNNSE 166
>gi|195498869|ref|XP_002096710.1| aly [Drosophila yakuba]
gi|194182811|gb|EDW96422.1| aly [Drosophila yakuba]
Length = 266
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 149/297 (50%), Gaps = 50/297 (16%)
Query: 1 MATHVDMSLDDIIKS---RKKSERERG-QGRARRGRGRGRGPSGSVSGG-------RMTG 49
M ++MSLDDIIKS +KK + RG G AR+ G+ R S + GG R G
Sbjct: 1 MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKPGGQQRTASNARRGGASAGGSPRKPG 60
Query: 50 AARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPG 109
+A +GP + AK R N W+HD+++ R A + G T+L V NL G
Sbjct: 61 SALKGPRGGVAGGAVQKAKFPRGDVNSAWKHDMYDGPKRGA-VGGGSGPTRLIVGNLDYG 119
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPM 169
V+N DI+ELF++ G +K+ A+H+D++GR G+A+V++ RR+DA A+K+Y+ V LDG+PM
Sbjct: 120 VSNTDIKELFNDFGPMKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPM 179
Query: 170 KIEVVGTNAEIPLQARVNVTGVNGRR--KRTVVMTSGSGNAGGAAAINRGPGSQGRRGGL 227
I++ ++ + L V T V R + G G AGG+ R G
Sbjct: 180 TIQLAVSDVAV-LTRPVAATDVKRRVGGAASAPFKRGGGQAGGSP-----------RRGF 227
Query: 228 RRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
+R G+ GQ R R K P +A++LD ELD+Y
Sbjct: 228 KRPVGGKPAAGGQRRER----------------------KAP--PTAEELDAELDSY 260
>gi|357157773|ref|XP_003577909.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding
protein 2-like [Brachypodium distachyon]
Length = 236
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 106/181 (58%), Gaps = 21/181 (11%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGR-GRGRGPSGSVSGGRMTGAARRGPLSNA 59
MA +DMSLDD+I K R +GRARR GRG GP+ S AA
Sbjct: 1 MAGSLDMSLDDLITKNKPHLR---RGRARRNHEGRG-GPTRSARRFHSRAAA-------- 48
Query: 60 RPSSYTIAKSFRRTRNFPWQ-HDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
A R NF Q + R + + T+LY+SNL V+N+DI++L
Sbjct: 49 -------APYHHRQLNFHQQAPPAYGFVARPMAMVEEDAPTRLYISNLDYNVSNEDIKDL 101
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
FSE+GE+ RY+I++DK+GR G+AEVV++ RS A AA+ +YNNV LDGKPMKIEVVGTN
Sbjct: 102 FSELGEVMRYSINYDKSGRSKGTAEVVFSTRSAARAAVNKYNNVHLDGKPMKIEVVGTNI 161
Query: 179 E 179
E
Sbjct: 162 E 162
>gi|195568864|ref|XP_002102432.1| GD19510 [Drosophila simulans]
gi|194198359|gb|EDX11935.1| GD19510 [Drosophila simulans]
Length = 273
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 150/305 (49%), Gaps = 51/305 (16%)
Query: 1 MATHVDMSLDDIIKS---RKKSERERG-QGRARRGRGRGRGPSGSVSGG-------RMTG 49
M ++MSLDDIIKS +KK + RG G AR+ G+ R G+ GG R G
Sbjct: 1 MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKPGGQQRFAGGARRGGANAGGSPRKPG 60
Query: 50 AARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPG 109
+ +GP + AK R N W+HD+++ R A G T+L V NL G
Sbjct: 61 SVLKGPRGGVAAGAVQKAKFPRGDVNSAWKHDMYDGPKRGAAGGG-SGPTRLIVGNLDYG 119
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPM 169
V+N DI+ELF++ G +K+ A+H+D++GR G+A+V++ RR+DA A+K+Y+ V LDG+PM
Sbjct: 120 VSNTDIKELFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPM 179
Query: 170 KIEVVGTNAEIPLQARVNVTGVNGRR--KRTVVMTSGSGNAGGAAAINRGPGSQGRRGGL 227
I++ ++ + L V T V R G G AGG A R G
Sbjct: 180 TIQLAVSDVAV-LTRPVTATDVKRRVGGPAPTPFKRGGGQAGGPA-----------RRGF 227
Query: 228 RRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAE 287
+R G+ GQ R R K P +A++LD ELD+Y +
Sbjct: 228 KRPVGGKPAAGGQRRER----------------------KAP--PTAEELDAELDSYIND 263
Query: 288 A-MQI 291
MQ+
Sbjct: 264 MKMQV 268
>gi|195344125|ref|XP_002038639.1| GM10513 [Drosophila sechellia]
gi|194133660|gb|EDW55176.1| GM10513 [Drosophila sechellia]
Length = 266
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 146/297 (49%), Gaps = 50/297 (16%)
Query: 1 MATHVDMSLDDIIKS---RKKSERERG-QGRARRGRGRGRGPSGSVSGG-------RMTG 49
M ++MSLDDIIKS +KK + RG G AR+ G+ R G+ GG R G
Sbjct: 1 MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKPGGQQRFTGGARRGGANAGGSPRKPG 60
Query: 50 AARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPG 109
+ +GP + AK R N W+HD+++ R A G T+L V NL G
Sbjct: 61 SVLKGPRGGVAAGAVQKAKFPRGDVNSAWKHDMYDGPKRGAAGGG-SGPTRLIVGNLDYG 119
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPM 169
V+N DI+ELF++ G +K+ A+H+D++GR G+A+V++ RR+DA A+K+Y+ V LDG+PM
Sbjct: 120 VSNTDIKELFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPM 179
Query: 170 KIEVVGTNAEIPLQARVNVTGVNGRR--KRTVVMTSGSGNAGGAAAINRGPGSQGRRGGL 227
I++ ++ + L V T V R G G AGG A R G
Sbjct: 180 TIQLAVSDVAV-LTRPVTATDVKRRVGGPAPTPFKRGGGQAGGPA-----------RRGF 227
Query: 228 RRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
+R G+ GQ R R K P +A++LD ELD+Y
Sbjct: 228 KRPVGGKPAAGGQRRER----------------------KAP--PTAEELDAELDSY 260
>gi|118137707|pdb|2F3J|A Chain A, The Solution Structure Of The Ref2-I Mrna Export Factor
(Residues 1-155)
Length = 177
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 102/182 (56%), Gaps = 28/182 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK R Q R RG G R GGR R
Sbjct: 15 MADKMDMSLDDIIKL------NRNQRRVNRGGGPRRNRPAIARGGR------------NR 56
Query: 61 PSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
P+ Y+ R + P WQHDLF+ G G+E G KL VSNL GV++ DI+EL
Sbjct: 57 PAPYS------RPKPLPDKWQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQEL 108
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
F+E G LK+ A+ +D++GR G+A+V + RR+DA A+K+Y V LDG+PM I++V +
Sbjct: 109 FAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLVASQI 168
Query: 179 EI 180
++
Sbjct: 169 DL 170
>gi|300085579|gb|ADJ67482.1| RNA and export factor binding protein 2 [Mus musculus]
Length = 218
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 101/181 (55%), Gaps = 28/181 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK R Q R RG G R GGR R
Sbjct: 1 MADKMDMSLDDIIKL------NRNQRRVNRGGGPRRNRPAIARGGR------------NR 42
Query: 61 PSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
P+ Y+ R + P WQHDLF+ G G+E G KL VSNL GV++ DI+EL
Sbjct: 43 PAPYS------RPKPLPDKWQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQEL 94
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
F+E G LK+ A+ +D++GR G+A+V + RR+DA A+K+Y V LDG+PM I++V +
Sbjct: 95 FAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLVASQI 154
Query: 179 E 179
+
Sbjct: 155 D 155
>gi|48474967|sp|Q9JJW6.1|REFP2_MOUSE RecName: Full=RNA and export factor-binding protein 2
gi|7159945|emb|CAB76384.1| RNA and export factor binding protein 2-I [Mus musculus]
Length = 218
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 101/181 (55%), Gaps = 28/181 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK R Q R RG G R GGR R
Sbjct: 1 MADKMDMSLDDIIKL------NRNQRRVNRGGGPRRNRPAIARGGR------------NR 42
Query: 61 PSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
P+ Y+ R + P WQHDLF+ G G+E G KL VSNL GV++ DI+EL
Sbjct: 43 PAPYS------RPKPLPDKWQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQEL 94
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
F+E G LK+ A+ +D++GR G+A+V + RR+DA A+K+Y V LDG+PM I++V +
Sbjct: 95 FAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLVASQI 154
Query: 179 E 179
+
Sbjct: 155 D 155
>gi|68534069|gb|AAH99405.1| RNA and export factor binding protein 2 [Mus musculus]
Length = 218
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 101/181 (55%), Gaps = 28/181 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK R Q R RG G R GGR R
Sbjct: 1 MADKMDMSLDDIIKL------NRNQRRVNRGGGPRRNRPAIARGGR------------NR 42
Query: 61 PSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
P+ Y+ R + P WQHDLF+ G G+E G KL VSNL GV++ DI+EL
Sbjct: 43 PAPYS------RPKPLPDKWQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQEL 94
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
F+E G LK+ A+ +D++GR G+A+V + RR+DA A+K+Y V LDG+PM I++V +
Sbjct: 95 FAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLVTSQI 154
Query: 179 E 179
+
Sbjct: 155 D 155
>gi|148238335|ref|NP_062357.3| RNA and export factor-binding protein 2 [Mus musculus]
gi|148707130|gb|EDL39077.1| RNA and export factor binding protein 2 [Mus musculus]
Length = 218
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 101/181 (55%), Gaps = 28/181 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK R Q R RG G R GGR R
Sbjct: 1 MADKMDMSLDDIIKL------NRNQRRVNRGGGPRRNRPAIARGGR------------NR 42
Query: 61 PSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
P+ Y+ R + P WQHDLF+ G G+E G KL VSNL GV++ DI+EL
Sbjct: 43 PAPYS------RPKPLPDKWQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQEL 94
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
F+E G LK+ A+ +D++GR G+A+V + RR+DA A+K+Y V LDG+PM I++V +
Sbjct: 95 FAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLVTSQI 154
Query: 179 E 179
+
Sbjct: 155 D 155
>gi|289740255|gb|ADD18875.1| RRM motif-containing protein [Glossina morsitans morsitans]
Length = 249
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 141/295 (47%), Gaps = 63/295 (21%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVS-GGRMTGAARRGPLSNA 59
M ++MSLD+IIKS ++ + G+G G R +G+ GGR R P
Sbjct: 1 MVDKIEMSLDEIIKSNRQIRKSGGRGGVA---GNRRNSAGTQRRGGRRNQGTSRKPGGGI 57
Query: 60 RPSSYTI-----AKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
AK R N W+HD+++ R GI KL VSNL GV++ D
Sbjct: 58 IKGRGGAGGIHKAKFSRGDVNSAWKHDMYDGPKR--GILKSAESAKLLVSNLDYGVSDSD 115
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
I+ELF+E G LK+ A+H+D++GR G+A+VV+ RRSDA A+K+YN V LDG+PM I+ +
Sbjct: 116 IKELFTEFGPLKKAAVHYDRSGRSLGTADVVFERRSDALKAIKQYNGVPLDGRPMNIQFL 175
Query: 175 GTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRR-----GGLRR 229
N E+ AA +NR G+ RR G ++R
Sbjct: 176 -ANPEV------------------------------AAGVNRLRGTPNRRRPQIGGAVKR 204
Query: 230 SSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
+S G RG R RG G +GKK + +A++LD ELD Y
Sbjct: 205 ASLGNRRGGASNRNRGNVG--------------NRGKK--IAPTAEELDAELDAY 243
>gi|26339222|dbj|BAC33282.1| unnamed protein product [Mus musculus]
Length = 218
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 101/181 (55%), Gaps = 28/181 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK R Q R RG G R GGR R
Sbjct: 1 MADKMDMSLDDIIKL------NRNQRRVNRGGGPRRNRPAIARGGR------------NR 42
Query: 61 PSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
P+ Y+ R + P WQHDLF+ G G+E G KL VSNL GV++ DI+EL
Sbjct: 43 PAPYS------RPKPLPDKWQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQEL 94
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
F+E G LK+ A+ +D++GR G+A+V + RR+DA A+K+Y V LDG+PM I++V +
Sbjct: 95 FAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLVTSQI 154
Query: 179 E 179
+
Sbjct: 155 D 155
>gi|148689731|gb|EDL21678.1| mCG1038850 [Mus musculus]
Length = 269
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 125/246 (50%), Gaps = 50/246 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSE--RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K + R+R R +RG G R GGR R P
Sbjct: 4 MADKMDMSLEDIIKLNKMQQGRRDRPDSRVKRGTGPKRYRPAFTHGGR----NRLAP--- 56
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL+VSNLH GV++ DI+
Sbjct: 57 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFVSNLHFGVSDADIQ 103
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
LF+E G LK+ A+H+D+ GR G+A+V + R++DA A++ YN LDG+PM I++
Sbjct: 104 LLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLA-- 161
Query: 177 NAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRS-----S 231
++I Q R + S N GG + R PGS GG + S
Sbjct: 162 TSQIDRQGR----------------PAQSKNRGG---MTRNPGSGVLIGGGTKKWTLGGS 202
Query: 232 QGRGRG 237
QGRGRG
Sbjct: 203 QGRGRG 208
>gi|262263339|ref|NP_001160110.1| uncharacterized protein LOC100043231 [Mus musculus]
gi|262263341|ref|NP_001160111.1| uncharacterized protein LOC100043235 [Mus musculus]
gi|262263343|ref|NP_001160113.1| uncharacterized protein LOC100043239 [Mus musculus]
Length = 289
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 101/183 (55%), Gaps = 24/183 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSE--RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K + R+R R +RG G R GGR R P
Sbjct: 4 MADKMDMSLEDIIKLNKMQQGRRDRPDSRVKRGTGPKRYRPAFTHGGR----NRLAP--- 56
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 57 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 103
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
LF+E G LK+ A+H+D+ GR G+A V + R++DA A++ YN LDG+PM I +V +
Sbjct: 104 LLFAEFGTLKKSAVHYDRCGRSLGTAHVHFERKADALKAMREYNGAPLDGRPMNIHLVTS 163
Query: 177 NAE 179
+
Sbjct: 164 QID 166
>gi|187956926|gb|AAI58091.1| EG667568 protein [Mus musculus]
Length = 286
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 101/183 (55%), Gaps = 24/183 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSE--RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K + R+R R +RG G R GGR R P
Sbjct: 1 MADKMDMSLEDIIKLNKMQQGRRDRPDSRVKRGTGPKRYRPAFTHGGR----NRLAP--- 53
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 54 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 100
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
LF+E G LK+ A+H+D+ GR G+A V + R++DA A++ YN LDG+PM I +V +
Sbjct: 101 LLFAEFGTLKKSAVHYDRCGRSLGTAHVHFERKADALKAMREYNGAPLDGRPMNIHLVTS 160
Query: 177 NAE 179
+
Sbjct: 161 QID 163
>gi|262263334|ref|NP_001160106.1| uncharacterized protein LOC100043227 [Mus musculus]
Length = 294
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 101/183 (55%), Gaps = 24/183 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSE--RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K + R+R R +RG G R GGR R P
Sbjct: 4 MADKMDMSLEDIIKLNKMQQGRRDRPDSRVKRGTGPKRYRPAFTHGGR----NRLAP--- 56
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 57 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 103
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
LF+E G LK+ A+H+D+ GR G+A V + R++DA A++ YN LDG+PM I +V +
Sbjct: 104 LLFAEFGTLKKSAVHYDRCGRSLGTAHVHFERKADALKAMREYNGAPLDGRPMNIHLVTS 163
Query: 177 NAE 179
+
Sbjct: 164 QID 166
>gi|187956930|gb|AAI58100.1| EG667568 protein [Mus musculus]
Length = 291
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 101/183 (55%), Gaps = 24/183 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSE--RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K + R+R R +RG G R GGR R P
Sbjct: 1 MADKMDMSLEDIIKLNKMQQGRRDRPDSRVKRGTGPKRYRPAFTHGGR----NRLAP--- 53
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 54 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 100
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
LF+E G LK+ A+H+D+ GR G+A V + R++DA A++ YN LDG+PM I +V +
Sbjct: 101 LLFAEFGTLKKSAVHYDRCGRSLGTAHVHFERKADALKAMREYNGAPLDGRPMNIHLVTS 160
Query: 177 NAE 179
+
Sbjct: 161 QID 163
>gi|357493017|ref|XP_003616797.1| THO complex subunit 4-A [Medicago truncatula]
gi|355518132|gb|AES99755.1| THO complex subunit 4-A [Medicago truncatula]
Length = 193
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 68/87 (78%), Gaps = 4/87 (4%)
Query: 126 KRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQAR 185
K AIH R GSAEVVY RRSDAFAALKRYNNVLLDGKPMKIE+VGTN+E+P+ AR
Sbjct: 83 KCEAIHM----RVVGSAEVVYNRRSDAFAALKRYNNVLLDGKPMKIEIVGTNSELPVTAR 138
Query: 186 VNVTGVNGRRKRTVVMTSGSGNAGGAA 212
VNV+ +N +RKRT VMT S +A G A
Sbjct: 139 VNVSAMNRQRKRTFVMTYCSASAFGVA 165
>gi|350400810|ref|XP_003485968.1| PREDICTED: THO complex subunit 4-A-like [Bombus impatiens]
Length = 249
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 111/190 (58%), Gaps = 16/190 (8%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRG----RGRGPSGSVSGGRMTGAARRGPL 56
M +DMSLDDIIK K + G R RG G RG + V GG M G R G
Sbjct: 3 MVDKIDMSLDDIIKQNKGTRPRGGSSRRGRGAGNSPRRGARRTQRVGGGVMRGRNRGGIT 62
Query: 57 SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG--TKLYVSNLHPGVTNDD 114
N+ P YT R N W+HD+F D ++ G S I TKL VSNL GV++ D
Sbjct: 63 RNSLP--YT-----RGDVNSAWKHDMF-DGVKKVGRSSIGSAGTTKLLVSNLDFGVSDSD 114
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
I+ELFSE G LK A+H+D++GR GSA+V++ RR+DA A+K+YN V LDG+ M I+V
Sbjct: 115 IQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMNIQV- 173
Query: 175 GTNAEIPLQA 184
+EIP+ +
Sbjct: 174 -ATSEIPVTS 182
>gi|340711000|ref|XP_003394070.1| PREDICTED: THO complex subunit 4-A-like [Bombus terrestris]
Length = 249
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 111/190 (58%), Gaps = 16/190 (8%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRG----RGRGPSGSVSGGRMTGAARRGPL 56
M +DMSLDDIIK K + G R RG G RG + V GG M G R G
Sbjct: 3 MVDKIDMSLDDIIKQNKGTRPRGGSSRRGRGAGNSPRRGARRTQRVGGGVMRGRNRGGIT 62
Query: 57 SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG--TKLYVSNLHPGVTNDD 114
N+ P YT R N W+HD+F D ++ G S I TKL VSNL GV++ D
Sbjct: 63 RNSLP--YT-----RGDVNSAWKHDMF-DGVKKVGRSSIGSAGTTKLLVSNLDFGVSDSD 114
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
I+ELFSE G LK A+H+D++GR GSA+V++ RR+DA A+K+YN V LDG+ M I+V
Sbjct: 115 IQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMNIQV- 173
Query: 175 GTNAEIPLQA 184
+EIP+ +
Sbjct: 174 -ATSEIPVTS 182
>gi|297606944|ref|NP_001059250.2| Os07g0237100 [Oryza sativa Japonica Group]
gi|255677625|dbj|BAF21164.2| Os07g0237100 [Oryza sativa Japonica Group]
Length = 204
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 74/88 (84%), Gaps = 3/88 (3%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIR---ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSD 151
+E GTKL++SNL PGVT DD++ ELFSEIGELKRY++++DK+G+ G+AEVV+AR+ D
Sbjct: 89 LETGTKLHISNLDPGVTVDDVQVLFELFSEIGELKRYSVNYDKDGKSQGTAEVVFARKVD 148
Query: 152 AFAALKRYNNVLLDGKPMKIEVVGTNAE 179
A A+KRY+ V+LDG PMKI+++G N+E
Sbjct: 149 ALEAIKRYDGVILDGNPMKIDLIGNNSE 176
>gi|397174787|ref|NP_001257571.1| RNA and export factor-binding protein 2-like [Mus musculus]
gi|397174792|ref|NP_001257573.1| RNA and export factor-binding protein 2-like [Mus musculus]
gi|399923570|ref|NP_001257827.1| RNA and export factor-binding protein 2-like [Mus musculus]
gi|399923572|ref|NP_001257828.1| RNA and export factor-binding protein 2-like [Mus musculus]
gi|399923574|ref|NP_001257829.1| RNA and export factor-binding protein 2-like [Mus musculus]
gi|399923576|ref|NP_001257830.1| RNA and export factor-binding protein 2-like [Mus musculus]
Length = 264
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 124/246 (50%), Gaps = 50/246 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSER--ERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K +R +R R RG G R GGR R P
Sbjct: 4 MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGR----NRLAP--- 56
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 57 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 103
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
LF+E G LK+ A+H+D+ GR G+A+V + R++DA A++ YN LDG+PM I++
Sbjct: 104 LLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLA-- 161
Query: 177 NAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRS-----S 231
++I Q R + S N GG + R PGS GG + S
Sbjct: 162 TSQIDRQGR----------------PAQSKNRGG---MTRNPGSGVLSGGGTKKWTLGGS 202
Query: 232 QGRGRG 237
QGRGRG
Sbjct: 203 QGRGRG 208
>gi|294712530|ref|NP_001171006.1| RNA and export factor-binding protein 2-like [Mus musculus]
Length = 268
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 124/246 (50%), Gaps = 50/246 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSER--ERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K +R +R R RG G R GGR R P
Sbjct: 4 MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGR----NRLAP--- 56
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 57 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 103
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
LF+E G LK+ A+H+D+ GR G+A+V + R++DA A++ YN LDG+PM I++
Sbjct: 104 LLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLA-- 161
Query: 177 NAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRS-----S 231
++I Q R + S N GG + R PGS GG + S
Sbjct: 162 TSQIDRQGR----------------PAQSKNRGG---MTRNPGSGVLSGGGTKKWTLGGS 202
Query: 232 QGRGRG 237
QGRGRG
Sbjct: 203 QGRGRG 208
>gi|383850832|ref|XP_003700978.1| PREDICTED: THO complex subunit 4-like [Megachile rotundata]
Length = 249
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 113/190 (59%), Gaps = 16/190 (8%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRG----RGRGPSGSVSGGRMTGAARRGPL 56
M ++MSLDDIIK K + G GR RG G RG + V GG M G +R G
Sbjct: 3 MVDKIEMSLDDIIKQNKGTRPRGGGGRRGRGAGNSPRRGARRTQRVGGGVMRGRSRGGIT 62
Query: 57 SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG--TKLYVSNLHPGVTNDD 114
N+ P YT R N W+HD+F D ++ G S I TKL VSNL GV++ D
Sbjct: 63 RNSLP--YT-----RGDVNSAWKHDMF-DGVKKVGRSAIGSAGTTKLLVSNLDFGVSDSD 114
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
I+ELFSE G LK A+H+D++GR GSA+V++ RR+DA A+K+YN V LDG+ M I+V
Sbjct: 115 IQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMNIQV- 173
Query: 175 GTNAEIPLQA 184
+EIP+ +
Sbjct: 174 -ATSEIPVTS 182
>gi|223462021|gb|AAI47567.1| Unknown (protein for MGC:182662) [Mus musculus]
gi|223462812|gb|AAI47507.1| Unknown (protein for MGC:182533) [Mus musculus]
Length = 266
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 124/246 (50%), Gaps = 50/246 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSER--ERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K +R +R R RG G R GGR R P
Sbjct: 1 MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGR----NRLAP--- 53
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 54 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 100
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
LF+E G LK+ A+H+D+ GR G+A+V + R++DA A++ YN LDG+PM I++
Sbjct: 101 LLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLA-- 158
Query: 177 NAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRS-----S 231
++I Q R + S N GG + R PGS GG + S
Sbjct: 159 TSQIDRQGR----------------PAQSKNRGG---MTRNPGSGVLSGGGTKKWTLGGS 199
Query: 232 QGRGRG 237
QGRGRG
Sbjct: 200 QGRGRG 205
>gi|359486823|ref|XP_002279224.2| PREDICTED: THO complex subunit 4 [Vitis vinifera]
Length = 84
Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats.
Identities = 54/83 (65%), Positives = 71/83 (85%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
+E GTKLY+SNL GV+NDDI+ELFSE+GELK+Y+IH+DK+G G+ EVV+ R++DA A
Sbjct: 1 METGTKLYISNLEYGVSNDDIKELFSEVGELKQYSIHYDKSGISKGTGEVVFLRQTDALA 60
Query: 155 ALKRYNNVLLDGKPMKIEVVGTN 177
A+KRYNNV LDGKP KI+++G N
Sbjct: 61 AIKRYNNVQLDGKPQKIDLIGAN 83
>gi|256051723|ref|XP_002569569.1| RNA and export factor binding protein [Schistosoma mansoni]
Length = 251
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 141/298 (47%), Gaps = 66/298 (22%)
Query: 5 VDMSLDDIIKSRKKSERERGQG----RARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
+DMSLDDIIK + + RG+G RA G V G R + + + P +
Sbjct: 1 MDMSLDDIIKLNRSQQGSRGKGLGWSRAGHQGRHGGAMQAPVWGNRRSRSLKNRPTMSGG 60
Query: 60 -------RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTN 112
RP+ Y+ + + + N QHDLF+ R G + +E+G KL+VSNL GV++
Sbjct: 61 SAGGGRKRPAPYS--RPIQLSNN--GQHDLFDSHFR--GGASMEMGGKLFVSNLDCGVSD 114
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
DI+ELFSE G LK A+H+D +GR G+A V + +++DA A+K+Y+ V LDG+PM I+
Sbjct: 115 ADIQELFSEFGTLKTAAVHYDCSGRSLGTAHVHFLQKADALKAMKQYDGVPLDGRPMNIQ 174
Query: 173 VVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQ 232
+V + T G+ P + RG +RR+
Sbjct: 175 LVSSQ-----------TDSQGK-----------------------PAQRINRGAMRRN-- 198
Query: 233 GRGRGQGQGRGRGRGGGGG---GGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAE 287
G G GGG G RG GR R + S + LD +LD YHA+
Sbjct: 199 ---------HGSGCFGGGLIRRGTRGGSPGRCRATSTNSKQHLSVEQLDAQLDEYHAQ 247
>gi|328780459|ref|XP_001121250.2| PREDICTED: THO complex subunit 4-like [Apis mellifera]
Length = 249
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 108/194 (55%), Gaps = 25/194 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQ--------GRARRGRGRGRGPSGSVSGGRMTGAAR 52
M +DMSLDDIIK K S G RRG R + GG M G R
Sbjct: 3 MVDKIDMSLDDIIKQNKGSRPRGGTGRRGRGAGNSPRRGARRTQR-----VGGVMRGRNR 57
Query: 53 RGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG--TKLYVSNLHPGV 110
G N+ P YT R N W+HD+F D ++ G S I TKL VSNL GV
Sbjct: 58 GGITRNSLP--YT-----RGDVNSAWKHDMF-DGVKKVGRSAIGSAGTTKLLVSNLDFGV 109
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMK 170
++ DI+ELFSE G LK A+H+D++GR GSA+V++ RR+DA A+K+YN V LDG+ M
Sbjct: 110 SDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMN 169
Query: 171 IEVVGTNAEIPLQA 184
I+V +EIP+ +
Sbjct: 170 IQV--ATSEIPVTS 181
>gi|224113443|ref|XP_002332576.1| predicted protein [Populus trichocarpa]
gi|222832914|gb|EEE71391.1| predicted protein [Populus trichocarpa]
Length = 116
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 68/79 (86%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
KLY+SNL GV+N+DI+ LFSE+GEL RY++H+D +GR G+AEVV++R++DA AA++RY
Sbjct: 13 KLYISNLDYGVSNEDIKVLFSEVGELLRYSLHYDMSGRSKGTAEVVFSRQTDALAAIRRY 72
Query: 160 NNVLLDGKPMKIEVVGTNA 178
NNV LDGKP+KIE+VG N
Sbjct: 73 NNVQLDGKPLKIELVGVNV 91
>gi|112983092|ref|NP_001037596.1| ALY [Bombyx mori]
gi|95115188|gb|ABF55960.1| ALY [Bombyx mori]
Length = 254
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 107/187 (57%), Gaps = 27/187 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRA-----RRGRGRGRGPSGSVSGGRMTGAARRGP 55
M ++M+LDDIIK+ KK+ G GR R GRG G G + SGG G R G
Sbjct: 1 MVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG- 59
Query: 56 LSNARPSSYTIAKSFRRTR---NFPWQHDLFEDS-----LRAAGISGIEVG-TKLYVSNL 106
I KS +R N W+HD+F D R +G I G TKL VSNL
Sbjct: 60 ----------ITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGT--ITTGPTKLLVSNL 107
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG 166
GV++ DI+ELFSE G LK ++H+D++GR G+A+VV+ R++DA A+K+YN V LDG
Sbjct: 108 DFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGVPLDG 167
Query: 167 KPMKIEV 173
+ M I++
Sbjct: 168 RAMNIQL 174
>gi|380014750|ref|XP_003691382.1| PREDICTED: THO complex subunit 4-like [Apis florea]
Length = 293
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 110/194 (56%), Gaps = 25/194 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRA--------RRGRGRGRGPSGSVSGGRMTGAAR 52
M +DMSLDDIIK K S G GR RRG R + GG M G R
Sbjct: 48 MVDKIDMSLDDIIKQNKGSRPRGGTGRRGRGAGNSPRRGARRTQR-----VGGVMRGRNR 102
Query: 53 RGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG--TKLYVSNLHPGV 110
G N+ P YT R N W+HD+F D ++ G S I TKL VSNL GV
Sbjct: 103 GGITRNSLP--YT-----RGDVNSAWKHDMF-DGVKKVGRSAIGSAGTTKLLVSNLDFGV 154
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMK 170
++ DI+ELFSE G LK A+H+D++GR GSA+V++ RR+DA A+K+YN V LDG+ M
Sbjct: 155 SDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYNGVPLDGREMN 214
Query: 171 IEVVGTNAEIPLQA 184
I+V +EIP+ +
Sbjct: 215 IQV--ATSEIPVTS 226
>gi|251765071|sp|B5FXN8.1|THOC4_TAEGU RecName: Full=THO complex subunit 4; Short=Tho4; AltName:
Full=Aly/REF export factor
gi|197127301|gb|ACH43799.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127302|gb|ACH43800.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127303|gb|ACH43801.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127304|gb|ACH43802.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127306|gb|ACH43804.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 112/191 (58%), Gaps = 20/191 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN-- 58
MA +DMSLDDIIK + GR RGRG G GG G A GP+ N
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGASRGGRGGRGRGGTARGGGPGRGGVGGGRAGGGPVRNRP 60
Query: 59 --------ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHP 108
RP+ Y+ R + P WQHDLF DS AG +G+E G KL VSNL
Sbjct: 61 VMARGGGRNRPAPYS------RPKQLPEKWQHDLF-DSGFGAG-AGVETGGKLLVSNLDF 112
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+P
Sbjct: 113 GVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRP 172
Query: 169 MKIEVVGTNAE 179
M I++V + +
Sbjct: 173 MNIQLVTSQID 183
>gi|413922289|gb|AFW62221.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
Length = 133
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 80/106 (75%), Gaps = 7/106 (6%)
Query: 35 GRGPSGSVSGGRMTGAARRGPL-SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGIS 93
GRG G V GR +G A RGPL N+RPS+ TIAKSF RT++ W+ DLF DS+ A S
Sbjct: 21 GRG--GHVLRGR-SGLAPRGPLGVNSRPSARTIAKSFSRTKDMTWRPDLFSDSMAA---S 74
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS 139
GIE GTKLY+SNL GV+N+DI+ELFSE+G LKR+A+H+D GRP+
Sbjct: 75 GIETGTKLYISNLDYGVSNEDIKELFSEVGHLKRFAVHYDGYGRPN 120
>gi|197127309|gb|ACH43807.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127310|gb|ACH43808.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 112/191 (58%), Gaps = 20/191 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN-- 58
MA +DMSLDDIIK + GR RGRG G GG G A GP+ N
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGASRGGRGGRGRGGTARGGGPGRGGVGGGRAGGGPVRNRP 60
Query: 59 --------ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHP 108
RP+ Y+ R + P WQHDLF DS AG +G+E G KL VSNL
Sbjct: 61 VMARGGGRNRPAPYS------RPKQLPEKWQHDLF-DSGFGAG-AGVETGGKLLVSNLDF 112
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+P
Sbjct: 113 GVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRP 172
Query: 169 MKIEVVGTNAE 179
M I++V + +
Sbjct: 173 MNIQLVTSQID 183
>gi|223461989|gb|AAI47488.1| Unknown (protein for MGC:182349) [Mus musculus]
Length = 285
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 121/236 (51%), Gaps = 29/236 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSE--RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DI+K K + +R R +RG G R GR R P
Sbjct: 1 MADKMDMSLEDILKLNKMQQGRLDRPDSRVKRGTGPKRYRPAFTHDGR----NRLAP--- 53
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 54 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 100
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
LF+E G LK+ A+H+D+ GR G+A V + R++DA A++ YN LDG+PM I +V
Sbjct: 101 LLFAEFGTLKKSAVHYDRCGRSLGTAHVHFERKADALKAMREYNGAPLDGRPMNIHLV-- 158
Query: 177 NAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQ 232
++I Q R + G R SG + GG G GSQGR G R+S+
Sbjct: 159 TSQIDRQGRPALNSDKGGMTRNP--GSGVLSGGGNKRWTLG-GSQGRGRGTSRNSK 211
>gi|262263336|ref|NP_001160109.1| uncharacterized protein LOC100043224 [Mus musculus]
gi|263195218|ref|NP_001160108.1| uncharacterized protein LOC100043247 [Mus musculus]
Length = 289
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 121/236 (51%), Gaps = 29/236 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSE--RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DI+K K + +R R +RG G R GR R P
Sbjct: 4 MADKMDMSLEDILKLNKMQQGRLDRPDSRVKRGTGPKRYRPAFTHDGR----NRLAP--- 56
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 57 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 103
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
LF+E G LK+ A+H+D+ GR G+A V + R++DA A++ YN LDG+PM I +V
Sbjct: 104 LLFAEFGTLKKSAVHYDRCGRSLGTAHVHFERKADALKAMREYNGAPLDGRPMNIHLV-- 161
Query: 177 NAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQ 232
++I Q R + G R SG + GG G GSQGR G R+S+
Sbjct: 162 TSQIDRQGRPALNSDKGGMTRNP--GSGVLSGGGNKRWTLG-GSQGRGRGTSRNSK 214
>gi|304441001|gb|ADM33940.1| ALY [Bombyx mori]
Length = 254
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 107/187 (57%), Gaps = 27/187 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRA-----RRGRGRGRGPSGSVSGGRMTGAARRGP 55
M ++M+LDDIIK+ KK+ G GR R GRG G G + SGG G R G
Sbjct: 1 MVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG- 59
Query: 56 LSNARPSSYTIAKSFRRTR---NFPWQHDLFEDS-----LRAAGISGIEVG-TKLYVSNL 106
I KS +R N W+HD+F D R +G I G TKL VSNL
Sbjct: 60 ----------ITKSTNYSRGDVNSTWKHDMFNDFGERKLPRNSGT--ITTGPTKLLVSNL 107
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG 166
GV++ DI+ELFSE G L+ ++H+D++GR G+A+VV+ R++DA A+K+YN V LDG
Sbjct: 108 DFGVSDSDIKELFSEFGILESASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGVPLDG 167
Query: 167 KPMKIEV 173
+ M I++
Sbjct: 168 RAMNIQL 174
>gi|387019131|gb|AFJ51683.1| THO complex subunit 4 [Crotalus adamanteus]
Length = 253
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 109/200 (54%), Gaps = 24/200 (12%)
Query: 1 MATHVDMSLDDIIK-SRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN- 58
M +DMSLDDIIK +R + G R G G G A GP+ N
Sbjct: 1 MGDKMDMSLDDIIKLNRSQRGGGGRAGGGRGRGRGATGRGGGAGRGGAGRAGGGGPVRNR 60
Query: 59 ---------ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLH 107
RP+ Y+ R + P WQHDLFE +G+E G KL VSNL
Sbjct: 61 AALSRGGGRNRPAPYS------RPKQLPEKWQHDLFESCFGPG--AGVETGGKLLVSNLD 112
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+
Sbjct: 113 FGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNCVPLDGR 172
Query: 168 PMKIEVVGTNAEI---PLQA 184
PM I++V + + P+Q+
Sbjct: 173 PMNIQLVTSQIDTQRRPIQS 192
>gi|322793642|gb|EFZ17092.1| hypothetical protein SINV_14629 [Solenopsis invicta]
Length = 256
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 107/197 (54%), Gaps = 27/197 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRA-----------RRGRGRGRGPSGSVSGGRMTG 49
M ++MSLDDIIK K S G RRG R + PSG V GR G
Sbjct: 6 MVDKIEMSLDDIIKQTKGSRARGSGGGGGRRGRGAGSSPRRGARRPQRPSGGVMRGRSRG 65
Query: 50 AARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG--TKLYVSNLH 107
R L YT R N W+HD+F D ++ G I TKL VSNL
Sbjct: 66 GIARSSLP------YT-----RGDVNSAWKHDMF-DGVKKVGRGAIGNAGTTKLLVSNLD 113
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
GV++ DI+ELFSE G LK A+H+D++GR GSA+V++ RR+DA A+K+Y+ V LDG+
Sbjct: 114 FGVSDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGR 173
Query: 168 PMKIEVVGTNAEIPLQA 184
M I+V +E+P+ +
Sbjct: 174 EMNIQV--ATSELPVTS 188
>gi|147898399|ref|NP_001089314.1| THO complex subunit 4-A [Xenopus laevis]
gi|82230182|sp|Q58EA2.1|THO4A_XENLA RecName: Full=THO complex subunit 4-A; Short=Tho4-A; AltName:
Full=Aly/REF export factor-A
gi|61403478|gb|AAH92013.1| MGC84954 protein [Xenopus laevis]
Length = 256
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 87/131 (66%), Gaps = 13/131 (9%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLF+ A +G+E G KL VSNL GV++ DI+E
Sbjct: 73 RPTPYS------RPKQLPDKWQHDLFDSGFGAG--AGMETGGKLLVSNLDFGVSDADIQE 124
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V +
Sbjct: 125 LFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQ 184
Query: 178 AEI---PLQAR 185
E P+Q++
Sbjct: 185 IEAQRRPIQSQ 195
>gi|432843262|ref|XP_004065594.1| PREDICTED: THO complex subunit 4-A-like [Oryzias latipes]
Length = 251
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 99/188 (52%), Gaps = 19/188 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSG-GRMTGAARRGPLSNA 59
MA + MSLDDIIK K+ R G R G S G GR + +R
Sbjct: 1 MADKMSMSLDDIIKMNKREGRGGGGSSGRERGSGRAGGSSRPPGRGRQSNFSRE---RTN 57
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEV-------GTKLYVSNLHPGV 110
RP+ YT R R P WQHD+FE+ R E +KL +SNL GV
Sbjct: 58 RPAPYT------RPRELPDKWQHDMFEEHSRGPRAQSPEADDSFGGSSSKLLISNLDFGV 111
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMK 170
++ DI++LF E G LK+ +IH+D++GR G AEV + ++DA A+K YN V LDG PMK
Sbjct: 112 SDSDIKDLFEEFGTLKKASIHYDRSGRSKGVAEVHFVNKADALKAMKHYNGVPLDGHPMK 171
Query: 171 IEVVGTNA 178
I+ V ++
Sbjct: 172 IQQVASDV 179
>gi|309264066|ref|XP_003086200.1| PREDICTED: RNA and export factor-binding protein 2-like [Mus
musculus]
Length = 193
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 110/211 (52%), Gaps = 26/211 (12%)
Query: 2 ATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP 61
A ++M+L+DIIK K +R + R RG G P +G R P
Sbjct: 5 ADKMNMTLEDIIKLNKIQQRRHNRPDPRMNRGAG--PKRYRPAITHSGRNRLAP------ 56
Query: 62 SSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+RR + P WQHD F RA + ++ KL +SNLH V++ DIR+LF
Sbjct: 57 --------YRRPKLLPDKWQHDRFVGCFRAG--NHMDTSGKLLLSNLHYRVSDADIRKLF 106
Query: 120 SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
SE G L++YA+H+D +GR G+A V + R++DA A+++YN + LDG+PM I++V + +
Sbjct: 107 SEFGTLRKYAVHYDGSGRSLGTAHVHFERKADALKAMRQYNGIPLDGRPMNIQLVTSQTD 166
Query: 180 IPLQARVNVTGVNGRRKRTVVMTSGSGNAGG 210
I + N R + T+ GSG G
Sbjct: 167 IQRRPAQN------RNRDTITRNPGSGGFSG 191
>gi|223646706|gb|ACN10111.1| THO complex subunit 4 [Salmo salar]
gi|223672557|gb|ACN12460.1| THO complex subunit 4 [Salmo salar]
Length = 242
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 112/201 (55%), Gaps = 34/201 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSG-----SVSGGRMTGAARRGP 55
MA +DMSLDDII+ KK RG R GRG SG +VSGGR G+ GP
Sbjct: 1 MADKMDMSLDDIIQQSKKGGGGRGNRGGRSRGSSGRGGSGGRPGGAVSGGRTGGS---GP 57
Query: 56 L----------SNARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGT---- 99
+ S++RP+ Y+ R R P WQHD+FE G G
Sbjct: 58 MRSRQNFSGDRSDSRPTPYS------RPRELPDKWQHDMFEGGFVGNAGGGGGAGGGGGV 111
Query: 100 ----KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + RR+DA A
Sbjct: 112 ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSQGTADVHFERRADALKA 171
Query: 156 LKRYNNVLLDGKPMKIEVVGT 176
+K+YNNV LDG+ M I+ V +
Sbjct: 172 MKQYNNVPLDGRAMSIQHVTS 192
>gi|197127308|gb|ACH43806.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 111/191 (58%), Gaps = 20/191 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN-- 58
MA +DMSLDDIIK + GR RGRG G GG G A GP+ N
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGASRGGRGGRGRGGTARGGGPGRGGVGGGRAGGGPVRNRP 60
Query: 59 --------ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHP 108
RP+ Y+ R + P WQHDLF DS AG +G+ G KL VSNL
Sbjct: 61 VMARGGGRNRPAPYS------RPKQLPEKWQHDLF-DSGFGAG-AGVYTGGKLLVSNLDF 112
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+P
Sbjct: 113 GVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRP 172
Query: 169 MKIEVVGTNAE 179
M I++V + +
Sbjct: 173 MNIQLVTSQID 183
>gi|350538663|ref|NP_001232343.1| THO complex subunit 4 [Taeniopygia guttata]
gi|197127307|gb|ACH43805.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 111/191 (58%), Gaps = 20/191 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN-- 58
MA +DMSLDD +K + GR RGRG G GG G A GP+ N
Sbjct: 1 MADKMDMSLDDFLKLNRSQRGASRGGRGGRGRGGTARGGGPGRGGVGGGRAGGGPVRNRP 60
Query: 59 --------ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHP 108
RP+ Y+ R + P WQHDLF DS AG +G+E G KL VSNL
Sbjct: 61 VMARGGGRNRPAPYS------RPKQLPEKWQHDLF-DSGFGAG-AGVETGGKLLVSNLDF 112
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+P
Sbjct: 113 GVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRP 172
Query: 169 MKIEVVGTNAE 179
M I++V + +
Sbjct: 173 MNIQLVTSQID 183
>gi|242003936|ref|XP_002422915.1| THO complex subunit, putative [Pediculus humanus corporis]
gi|212505808|gb|EEB10177.1| THO complex subunit, putative [Pediculus humanus corporis]
Length = 315
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 139/292 (47%), Gaps = 62/292 (21%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARR-----GRGRGRGPSGSVSGGRMTGAARRGP 55
M VDMSL DIIK K+ + R G R RG + GG GA R
Sbjct: 66 MVDKVDMSLADIIKQSKQGRGTNRRRRGNTRAFGGGNRRSRGSLRNTVGG---GALRSRR 122
Query: 56 LSNARPSSYTIAKSFRRTRNFPWQHDLFE--DSLRAA-GISGIEVGTKLYVSNLHPGVTN 112
+N R S Y+ +R WQHD+F+ +R+ G+ G KL +SNL GV++
Sbjct: 123 SANLR-SPYSRGTGDIESR---WQHDMFDGFAPVRSPRGVQGAMGPAKLLISNLEFGVSD 178
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
D+ ELF+E G LK A+H+D++GR G+A+V++ RR DA A+ +YN+V LDG+PM I+
Sbjct: 179 SDVTELFAEFGPLKSAAVHYDRSGRSLGTADVIFLRREDAIKAMMQYNSVPLDGRPMNIQ 238
Query: 173 VVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQ 232
++ +E+P S GN QG R G + +
Sbjct: 239 LI--TSEVP---------------------SFGGN------------KQGVRQGRVQKAG 263
Query: 233 GRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
GR QG RGRG R G GRG K +A++LD ELD Y
Sbjct: 264 GR-----QGFQRGRG-------NRRSGDGRGNAKNQDRQLTAEELDAELDAY 303
>gi|391343173|ref|XP_003745887.1| PREDICTED: RNA and export factor-binding protein 2-like
[Metaseiulus occidentalis]
Length = 257
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 100/180 (55%), Gaps = 12/180 (6%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPS------GSVSGGRMTGAARRG 54
M VDMSLDDIIKS + S + GR RG G G TGA R+
Sbjct: 1 MVDKVDMSLDDIIKSNRSSFKTGRGGRGGPRRGGGGARPRGARAVGPARKAFSTGAGRKF 60
Query: 55 PLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
P+ S R WQHD F + +KL +SNLH GV++ D
Sbjct: 61 -APKGSPAKKNNGSSGDR-----WQHDKFRGPAANGTAPNRDGSSKLTISNLHYGVSDAD 114
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
IRELF+E G LK+ A+H+D++GR G+A+V++ RR+DA A+K+YN+V LDG+PMKIE+V
Sbjct: 115 IRELFNEFGALKKAAVHYDRSGRSLGTADVIFERRTDALRAMKQYNDVPLDGRPMKIEIV 174
>gi|62857865|ref|NP_001017027.1| THO complex subunit 4 [Xenopus (Silurana) tropicalis]
gi|123915952|sp|Q28FB9.1|THOC4_XENTR RecName: Full=THO complex subunit 4; Short=Tho4; AltName:
Full=Aly/REF export factor
gi|89269092|emb|CAJ81934.1| THO complex 4 [Xenopus (Silurana) tropicalis]
gi|138519928|gb|AAI35843.1| hypothetical protein LOC549781 [Xenopus (Silurana) tropicalis]
Length = 260
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 86/131 (65%), Gaps = 13/131 (9%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLF+ +G+E G KL VSNL GV++ DI+E
Sbjct: 76 RPAPYS------RPKQLPDKWQHDLFDSGFGTG--AGMETGGKLLVSNLDFGVSDADIQE 127
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V +
Sbjct: 128 LFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQ 187
Query: 178 AEI---PLQAR 185
E P+Q++
Sbjct: 188 IEAQRRPIQSQ 198
>gi|407262786|ref|XP_003945361.1| PREDICTED: RNA and export factor-binding protein 2-like [Mus
musculus]
Length = 184
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 107/206 (51%), Gaps = 26/206 (12%)
Query: 7 MSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSYTI 66
M+L+DIIK K +R + R RG G P +G R P
Sbjct: 1 MTLEDIIKLNKIQQRRHNRPDPRMNRGAG--PKRYRPAITHSGRNRLAP----------- 47
Query: 67 AKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGE 124
+RR + P WQHD F RA + ++ KL +SNLH V++ DIR+LFSE G
Sbjct: 48 ---YRRPKLLPDKWQHDRFVGCFRAG--NHMDTSGKLLLSNLHYRVSDADIRKLFSEFGT 102
Query: 125 LKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQA 184
L++YA+H+D +GR G+A V + R++DA A+++YN + LDG+PM I++V + +I +
Sbjct: 103 LRKYAVHYDGSGRSLGTAHVHFERKADALKAMRQYNGIPLDGRPMNIQLVTSQTDIQRRP 162
Query: 185 RVNVTGVNGRRKRTVVMTSGSGNAGG 210
N R + T+ GSG G
Sbjct: 163 AQN------RNRDTITRNPGSGGFSG 182
>gi|363740921|ref|XP_001232393.2| PREDICTED: THO complex subunit 4 [Gallus gallus]
Length = 255
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 84/122 (68%), Gaps = 10/122 (8%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLF DS AG +G+E G KL VSNL GV++ DI+E
Sbjct: 71 RPAPYS------RPKQLPEKWQHDLF-DSGFGAG-AGVETGGKLLVSNLDFGVSDADIQE 122
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V +
Sbjct: 123 LFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQ 182
Query: 178 AE 179
+
Sbjct: 183 ID 184
>gi|215706378|dbj|BAG93234.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 112/173 (64%), Gaps = 15/173 (8%)
Query: 122 IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI- 180
+G LK A+H+D N RP+GSAEV++ RRS+A AALKRYNNV LDGKPMKIEV+G + +
Sbjct: 1 MGHLKHCAVHYDNNRRPTGSAEVIFTRRSEAVAALKRYNNVRLDGKPMKIEVIGADLGMA 60
Query: 181 -PLQARVNVT-GVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQ 238
P RV+V G GR +R VVM G G AA GS G +R++ + GQ
Sbjct: 61 APSAPRVSVVPGARGRGQREVVMMPGGSGFGRGAA-----GSSNFIPGWKRNNFAQRGGQ 115
Query: 239 GQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQI 291
G+GRGRGR GRGRGRG +K PV+KSA+ LDKELD+YH+ AM +
Sbjct: 116 GRGRGRGR-------NNFGRGRGRGYVRKGPVEKSAEQLDKELDSYHSGAMNV 161
>gi|332016673|gb|EGI57527.1| RNA and export factor-binding protein 2 [Acromyrmex echinatior]
Length = 250
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 108/197 (54%), Gaps = 27/197 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRA-----------RRGRGRGRGPSGSVSGGRMTG 49
M ++MSLDDIIK K S G G + RRG R + SG V GR G
Sbjct: 1 MVDKIEMSLDDIIKQTKGSRARGGGGASGRRGRGAGSSPRRGARRVQRASGGVMRGRNRG 60
Query: 50 AARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG--TKLYVSNLH 107
R L YT R N W+HD+F D ++ G I TKL VSNL
Sbjct: 61 GIARSSLP------YT-----RGDVNSAWKHDMF-DGVKKVGRGAIGSAGTTKLLVSNLD 108
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
GV++ DI+ELFSE G LK A+H+D++GR GSA+V++ RR+DA A+K+Y+ V LDG+
Sbjct: 109 FGVSDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGR 168
Query: 168 PMKIEVVGTNAEIPLQA 184
M I+V +E+P+ +
Sbjct: 169 EMNIQV--ATSELPITS 183
>gi|403280751|ref|XP_003945202.1| PREDICTED: LOW QUALITY PROTEIN: THO complex subunit 4 [Saimiri
boliviensis boliviensis]
Length = 230
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 87/129 (67%), Gaps = 6/129 (4%)
Query: 55 PLSNARPSSYTIAKS--FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGV 110
P +P+ ++ ++ R + P WQHDLF DS AG +G+E G KL VSNL GV
Sbjct: 33 PTEQLQPAEHSQSQPXPHSRPKQLPDKWQHDLF-DSGFGAG-AGVETGGKLLVSNLDFGV 90
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMK 170
++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM
Sbjct: 91 SDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMN 150
Query: 171 IEVVGTNAE 179
I++V + +
Sbjct: 151 IQLVTSQID 159
>gi|196000482|ref|XP_002110109.1| hypothetical protein TRIADDRAFT_53742 [Trichoplax adhaerens]
gi|190588233|gb|EDV28275.1| hypothetical protein TRIADDRAFT_53742 [Trichoplax adhaerens]
Length = 245
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 108/179 (60%), Gaps = 19/179 (10%)
Query: 1 MATH-VDMSLDDIIK--SRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS 57
MAT +DMSLDDIIK + R RG+GR RG SG GG MTG R+
Sbjct: 1 MATEKIDMSLDDIIKKSGGRGRGRGRGRGRGGRGGRGRGTMSGRGRGGNMTGRNRQR--- 57
Query: 58 NARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDI 115
F R+R P W HD+++ G + I +KL +SNL GV+++DI
Sbjct: 58 ---------MTPFSRSRTLPDKWDHDMYKGG--GLGPNRISTSSKLLISNLDYGVSDNDI 106
Query: 116 RELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
+ELFSE G LK+ ++H+D++GR G+AEV++ R+ A AALK+YNN+ LDG+PMKI++V
Sbjct: 107 KELFSEFGNLKKGSVHYDRSGRSLGTAEVIFDRKEGAVAALKKYNNIPLDGRPMKIQLV 165
>gi|148223950|ref|NP_001086215.1| THO complex subunit 4-B [Xenopus laevis]
gi|82236414|sp|Q6GLW1.1|THO4B_XENLA RecName: Full=THO complex subunit 4-B; Short=Tho4-B; AltName:
Full=Aly/REF export factor-B
gi|49257659|gb|AAH74336.1| MGC84169 protein [Xenopus laevis]
Length = 256
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 87/131 (66%), Gaps = 13/131 (9%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLF DS G +G+E G KL VSNL GV++ DI+E
Sbjct: 72 RPTPYS------RPKQLPDKWQHDLF-DSGFGTG-AGMETGGKLLVSNLDFGVSDADIQE 123
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+ M I++V +
Sbjct: 124 LFAEFGSLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRSMNIQLVTSQ 183
Query: 178 AEI---PLQAR 185
E P+Q++
Sbjct: 184 IEAQRRPIQSQ 194
>gi|357503111|ref|XP_003621844.1| THO complex subunit [Medicago truncatula]
gi|355496859|gb|AES78062.1| THO complex subunit [Medicago truncatula]
Length = 315
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 72/96 (75%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
TKLY+SNL V+N+DI LFSE GEL+ Y+IH+D+ GR G+AEVV+ R+S+A AALKR
Sbjct: 75 TKLYLSNLDDRVSNEDIHLLFSEEGELESYSIHYDQFGRSKGTAEVVFTRQSEALAALKR 134
Query: 159 YNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGR 194
YNN+ LDGK ++IE+VGT+ P A + + + G+
Sbjct: 135 YNNMKLDGKTLQIELVGTSLVTPAAAPLGQSSLLGK 170
>gi|307180346|gb|EFN68372.1| THO complex subunit 4 [Camponotus floridanus]
Length = 247
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 138/296 (46%), Gaps = 58/296 (19%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQ-------GRARRGRGRGRGPSGSVSGGRMTGAARR 53
M ++MSLDDIIK K S G RRG R + G V GR G R
Sbjct: 1 MVDKIEMSLDDIIKQTKGSRARGGGRRGRGAGNSPRRGARRAQRVGGGVMRGRNRGGIAR 60
Query: 54 GPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAA-GISGIEVGTKLYVSNLHPGVTN 112
L YT R N W+HD+F+ + G+ G TKL VSNL GV++
Sbjct: 61 SSLP------YT-----RGDVNSAWKHDMFDGVKKVGRGVIGNAGTTKLLVSNLDFGVSD 109
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
DI+ELFSE G LK A+H+D++GR GSA+V++ RR+DA A+K+Y+ V LDG+ M I+
Sbjct: 110 SDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREMNIQ 169
Query: 173 VVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQ 232
V +E+P VT V G GP G R ++
Sbjct: 170 V--ATSELP------VTSVRG-----------------------GPRLSGTNYTQRPQTR 198
Query: 233 GRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEA 288
RG RG G G GG RG G Q K P +A++LD EL+ Y E
Sbjct: 199 FRG-----NRGTGSVRGRGGSGRRGGRGGIRQVTKTP---TAEELDAELEAYVKEV 246
>gi|390980746|pdb|2YKA|A Chain A, Rrm Domain Of Mrna Export Adaptor Ref2-I Bound To Hvs
Orf57 Peptide
Length = 124
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ G G+E G KL VSNL GV++ DI+ELF+E G LK+ A+ +D++GR
Sbjct: 17 WQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGR 74
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI 180
G+A+V + RR+DA A+K+Y V LDG+PM I++V + ++
Sbjct: 75 SLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLVASQIDL 117
>gi|6755763|ref|NP_035698.1| THO complex subunit 4 [Mus musculus]
gi|48474242|sp|O08583.3|THOC4_MOUSE RecName: Full=THO complex subunit 4; Short=Tho4; AltName: Full=Ally
of AML-1 and LEF-1; AltName: Full=Aly/REF export factor;
AltName: Full=REF1-I; AltName: Full=RNA and export
factor-binding protein 1; AltName: Full=Transcriptional
coactivator Aly/REF
gi|1916290|gb|AAC53117.1| ALY [Mus musculus]
gi|111307348|gb|AAI20589.1| THO complex 4 [Mus musculus]
gi|148702823|gb|EDL34770.1| THO complex 4 [Mus musculus]
gi|187957054|gb|AAI37659.1| THO complex 4 [Mus musculus]
Length = 255
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 107/198 (54%), Gaps = 32/198 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARR----GPL 56
MA +DMSLDDIIK + RG GR R G G G+V AAR GP+
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGAVQA-----AARVNRGGGPM 55
Query: 57 SN-------------ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKL 101
N RP+ Y+ R + P WQHDLF+ G KL
Sbjct: 56 RNRPAIARGAAGGGRNRPAPYS------RPKQLPDKWQHDLFDSGFGGGAGVE--TGGKL 107
Query: 102 YVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNN 161
VSNL GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN
Sbjct: 108 LVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNG 167
Query: 162 VLLDGKPMKIEVVGTNAE 179
V LDG+PM I++V + +
Sbjct: 168 VPLDGRPMNIQLVTSQID 185
>gi|317454987|pdb|2KT5|A Chain A, Rrm Domain Of Mrna Export Adaptor Ref2-I Bound To Hsv-1
Icp27 Peptide
Length = 124
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ G G+E G KL VSNL GV++ DI+ELF+E G LK+ A+ +D++GR
Sbjct: 17 WQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGR 74
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI 180
G+A+V + RR+DA A+K+Y V LDG+PM I++V + ++
Sbjct: 75 SLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLVASQIDL 117
>gi|348521070|ref|XP_003448049.1| PREDICTED: THO complex subunit 4-like [Oreochromis niloticus]
Length = 258
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 107/213 (50%), Gaps = 28/213 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRG-----RGRGRGPSGSVSGGRMTGAARRGP 55
M +DMSLDDIIK KK G R R G + GR + R
Sbjct: 1 MGDKMDMSLDDIIKMSKKGGSGGGGSRGRGTFARAGGSGRGGGPSRPARGRQSNFNR--- 57
Query: 56 LSNARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGT--------KLYVSN 105
N R + YT R R P WQHD+FE+ + + G KL +SN
Sbjct: 58 --NNRSTPYT------RPRELPDKWQHDMFEEHVGGRAGNSGGNGGGNGGGNGGKLLISN 109
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLD 165
L GV++ DIRELF+E G LK+ +IH+D++GR G+A+V + ++DA A+K YN V LD
Sbjct: 110 LDFGVSDSDIRELFAEFGALKKASIHYDRSGRSKGTADVHFVNKADALKAMKHYNGVPLD 169
Query: 166 GKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRT 198
G+PMKI+ +E Q R N G+N RT
Sbjct: 170 GRPMKIQ--QATSEFDTQNRQNTQGLNKGFDRT 200
>gi|357487165|ref|XP_003613870.1| THO complex subunit 4-A [Medicago truncatula]
gi|355515205|gb|AES96828.1| THO complex subunit 4-A [Medicago truncatula]
Length = 82
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/63 (77%), Positives = 56/63 (88%)
Query: 140 GSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTV 199
GSAEVVY RRSDAF ALKRYNNVLLDGKPMKIE+VGTN+E+P+ AR NV+ +N +RKRT
Sbjct: 18 GSAEVVYNRRSDAFTALKRYNNVLLDGKPMKIEIVGTNSELPVTARANVSAMNRQRKRTF 77
Query: 200 VMT 202
VMT
Sbjct: 78 VMT 80
>gi|221126616|ref|XP_002155396.1| PREDICTED: THO complex subunit 4-like [Hydra magnipapillata]
Length = 244
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 107/194 (55%), Gaps = 22/194 (11%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
+A VD+SLD+II S KKS R +GR +GS GG GP+ N R
Sbjct: 2 VADKVDLSLDEIIASNKKSRGGRSRGRG----------AGSGRGGTSRRGGAGGPIRNTR 51
Query: 61 P-SSYTIAKSFRRTRNFP--WQHDLFEDSL-----RAAGISGIEVGTKLYVSNLHPGVTN 112
TI +RR ++ P W+HD+F+ S G+ GT L +SNL GVT
Sbjct: 52 GGRERTIP--YRRPKSIPERWEHDMFDGSSSRGRSNIGSSDGLVTGTHLQISNLDFGVTE 109
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
DI+ELFSE G LK+ I++D++GR G+A+V + R+ DA ALK YN V LDG+PMKI
Sbjct: 110 SDIKELFSEFGNLKKVRINYDESGRSHGTADVFFERKPDALKALKTYNEVPLDGRPMKIV 169
Query: 173 VV--GTNAEIPLQA 184
V G + E P +
Sbjct: 170 AVSGGASFEKPFTS 183
>gi|149055045|gb|EDM06862.1| rCG32827, isoform CRA_b [Rattus norvegicus]
Length = 256
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 106/194 (54%), Gaps = 23/194 (11%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARR----GPL 56
MA +DMSLDDIIK + RG GR R G G G+V AAR GP+
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGAVQA-----AARVNRGGGPM 55
Query: 57 SNARPS---------SYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSN 105
N RP+ + R + P WQHDLF+ G KL VSN
Sbjct: 56 RN-RPAIARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSN 112
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLD 165
L GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LD
Sbjct: 113 LDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLD 172
Query: 166 GKPMKIEVVGTNAE 179
G+PM I++V + +
Sbjct: 173 GRPMNIQLVTSQID 186
>gi|159138039|gb|ABW89022.1| transcriptional coactivator [Clonorchis sinensis]
Length = 210
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 93/173 (53%), Gaps = 29/173 (16%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D+SLDDII+ +K R GRGR RG + + G R G ARR AR
Sbjct: 1 MDLSLDDIIQRNRKQPR---------GRGRARG-ANPLRGVRRGGIARRSTGGGARVLPE 50
Query: 65 TIAKSFRRTRNFPWQHDLFEDSLRAAGISG--IEVGTKLYVSNLHPGVTNDDIRELFSEI 122
WQHD+F+ G G V KL++SNL GV+NDDI ELF E
Sbjct: 51 K------------WQHDMFQ-----GGRDGRQTSVSNKLHISNLDFGVSNDDINELFREF 93
Query: 123 GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
G ++R A+H+D++GR G+AEVV+ A A YN V LDG+PM I++VG
Sbjct: 94 GAIRRAAVHYDRSGRSLGTAEVVFLNPLSATKARSHYNGVPLDGRPMVIQLVG 146
>gi|405969437|gb|EKC34408.1| THO complex subunit 4-A [Crassostrea gigas]
Length = 305
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 105/195 (53%), Gaps = 25/195 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGR-----GRGPSGSVSGGRMTGAARRGP 55
M+ +D+SLDDIIK KK G RG G + P G G G RG
Sbjct: 1 MSDKLDLSLDDIIKQNKKKGGRGGGRGGGRGGGGGGGRFNKSPRGGRGRGGNRGGGGRGA 60
Query: 56 LS---NARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIE----------VGTK 100
R +S + F R++ P WQHD+F+ G++ ++ K
Sbjct: 61 FRGGIQKRRASTGRSPQFSRSKEIPDVWQHDMFD-----GGVAPVKRFGGGVGGGSGDGK 115
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L++SNL GV + DI+ELF+E G LK A+H+DK+GR G+AEVV+ RR DA A+ +YN
Sbjct: 116 LHISNLDFGVNDSDIQELFAEFGPLKMAAVHYDKSGRSIGTAEVVFERRLDAQKAMTQYN 175
Query: 161 NVLLDGKPMKIEVVG 175
NV LDG+PM I+++G
Sbjct: 176 NVPLDGRPMNIQLIG 190
>gi|302756027|ref|XP_002961437.1| hypothetical protein SELMODRAFT_7263 [Selaginella moellendorffii]
gi|302817177|ref|XP_002990265.1| hypothetical protein SELMODRAFT_8476 [Selaginella moellendorffii]
gi|300141974|gb|EFJ08680.1| hypothetical protein SELMODRAFT_8476 [Selaginella moellendorffii]
gi|300170096|gb|EFJ36697.1| hypothetical protein SELMODRAFT_7263 [Selaginella moellendorffii]
Length = 80
Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats.
Identities = 49/80 (61%), Positives = 65/80 (81%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
++ G +LYVSNL GV+NDDI+ELFSEIGELK+ +IH+DK GR G+AEV +AR+ A
Sbjct: 1 LDEGARLYVSNLDSGVSNDDIKELFSEIGELKQCSIHYDKVGRSKGTAEVYFARKERALV 60
Query: 155 ALKRYNNVLLDGKPMKIEVV 174
A+K+YNNV LDGKPM I+++
Sbjct: 61 AMKQYNNVQLDGKPMVIDMI 80
>gi|194216535|ref|XP_001489489.2| PREDICTED: THO complex subunit 4-like [Equus caballus]
Length = 207
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 85/139 (61%), Gaps = 9/139 (6%)
Query: 47 MTGAA------RRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTK 100
MTGAA RGP S P + +++ + WQHDLF+ E G K
Sbjct: 1 MTGAAGVPGDCARGP-SCGNPYKFLCSRTHPKQLPDKWQHDLFDSGFGGGAGV--ETGGK 57
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L VSNL GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN
Sbjct: 58 LLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYN 117
Query: 161 NVLLDGKPMKIEVVGTNAE 179
V LDG+PM I++V + +
Sbjct: 118 GVPLDGRPMNIQLVTSQID 136
>gi|209736566|gb|ACI69152.1| THO complex subunit 4 [Salmo salar]
gi|223647606|gb|ACN10561.1| THO complex subunit 4 [Salmo salar]
Length = 272
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 109/197 (55%), Gaps = 27/197 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRG--PL-- 56
MA +DMSLDDII+ KK RG R GRG SG GG +G G P+
Sbjct: 1 MADKMDMSLDDIIQQSKKGGGGRGNRGGRSRGSSGRGGSGGRPGGAGSGGRTGGSGPMRS 60
Query: 57 --------SNARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGT------- 99
S++RP+ Y+ R R P WQHD+FE + G G
Sbjct: 61 RQNFSGDRSDSRPTPYS------RPRELPDKWQHDMFEGGFGSNAGGGGGAGGGGVETGG 114
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + RR+DA A+K+Y
Sbjct: 115 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSQGTADVHFERRADALKAMKQY 174
Query: 160 NNVLLDGKPMKIEVVGT 176
NNV LDG+ M I+ V +
Sbjct: 175 NNVPLDGRAMSIQHVTS 191
>gi|291223306|ref|XP_002731646.1| PREDICTED: THO complex 4-like [Saccoglossus kowalevskii]
Length = 265
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 110/194 (56%), Gaps = 21/194 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARR-----GRGRGRGPSGSVSGGRMTGAARRGP 55
M +DMSLDDIIK K + R RG+G R G GG + +RG
Sbjct: 1 MGDKIDMSLDDIIKLNKPTGRGRGRGGRGGGSRGGARQFRGGRGAGGRGGPVRRTQQRGA 60
Query: 56 LSNARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRA-----AGIS--GIEVGTKLYVSNL 106
N RP+ Y+ R + P W+HD+F+ + A IS G KL VSNL
Sbjct: 61 GRN-RPTPYS------RPKELPDSWEHDMFDGGVGLGVGGRALISRDGQSQQGKLLVSNL 113
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG 166
GV++ DI+ELF++ G LKR A+H+D++GR G+A+V++ +++DA A+K+YNNV LDG
Sbjct: 114 DFGVSDADIQELFADFGNLKRAAVHYDRSGRSLGTADVIFEKKNDAIKAMKQYNNVPLDG 173
Query: 167 KPMKIEVVGTNAEI 180
+ M I++V + E+
Sbjct: 174 RAMNIQLVTSATEV 187
>gi|427781753|gb|JAA56328.1| Putative tho complex subunit 4 [Rhipicephalus pulchellus]
Length = 251
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 102/186 (54%), Gaps = 12/186 (6%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS--- 57
MA +DMSLDDIIK + R RGRG G + G +
Sbjct: 1 MADKIDMSLDDIIKMNRSQFRTTRGRGRGRGRGAGGFAGRGAARGFGGAGGAVRRGTLRG 60
Query: 58 NARPSSYTIAKSFRRTRNFP--WQHDLFE-----DSLRAAGISGIEVGTKLYVSNLHPGV 110
R Y A+SF + + P WQHD+++ +L +KL VSNL GV
Sbjct: 61 RVRQQPY--ARSFTQAKELPDRWQHDMYDGVGGRRALTGGLGGAGMGPSKLLVSNLDYGV 118
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMK 170
++ DI+ELF+E G L++ A+H+D++GR G+A+VV+ RR+DA A+K+YN V LDG+PM
Sbjct: 119 SDADIKELFAEFGPLRKAAVHYDRSGRSLGTADVVFERRTDAVRAMKQYNGVPLDGRPMN 178
Query: 171 IEVVGT 176
I++V +
Sbjct: 179 IQLVTS 184
>gi|195391988|ref|XP_002054641.1| GJ22697 [Drosophila virilis]
gi|194152727|gb|EDW68161.1| GJ22697 [Drosophila virilis]
Length = 274
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 37/201 (18%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M ++MSLDDIIKS + ++ +G GRG GPSG+ G G
Sbjct: 1 MVDKIEMSLDDIIKSTRTQKKPQG--------GRG-GPSGTRRPGGQQRFGTGGTRRGGG 51
Query: 61 PSSYTIAK--------------------SFRRTR------NFPWQHDLFEDSLRAAGISG 94
P+S + K + ++ R N W+HD++ D + G +G
Sbjct: 52 PNSGSPRKPAPASGAGGVLKGRRGGGSGAIQKPRLARGDVNSAWKHDMY-DGPKRNGSAG 110
Query: 95 IEVG-TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAF 153
G T+L V NL GV+N DI+ELF++ G +K+ A+H+D++GR G+A+V++ RRSDA
Sbjct: 111 NSTGPTRLIVGNLDYGVSNTDIKELFNDFGPMKKAAVHYDRSGRSLGTADVIFERRSDAL 170
Query: 154 AALKRYNNVLLDGKPMKIEVV 174
A+K+Y+ V LDG+PM I++
Sbjct: 171 KAIKQYHGVPLDGRPMTIQLA 191
>gi|384484326|gb|EIE76506.1| hypothetical protein RO3G_01210 [Rhizopus delemar RA 99-880]
Length = 242
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 101/189 (53%), Gaps = 27/189 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA+ +D +LDD+IK R++ + RR G R +G + R P+ +
Sbjct: 1 MASRLDQALDDVIKDRRRDKHHSN----RRSHGGRRSDTGPIR-------KRSEPVVRSF 49
Query: 61 PSSYTIAKSFRRTR--------NFPWQHDLFEDSL--RAAGISG------IEVGTKLYVS 104
+ I S +R R N PW HD FED + R + I+ G +L +
Sbjct: 50 IRTMKIQGSSQRGRGAAGGRDVNSPWAHDRFEDDVPQRESFITSRLGPRNDNRGVELSIE 109
Query: 105 NLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLL 164
NLH VT D+ ELFS +G +++ + +D++GR +G A+V YA SDA A+K+++NV L
Sbjct: 110 NLHYNVTEQDVLELFSTVGPVEKARLFYDRSGRSTGQAKVKYASSSDADKAIKKFDNVEL 169
Query: 165 DGKPMKIEV 173
DG+PMKIE+
Sbjct: 170 DGQPMKIEI 178
>gi|255575082|ref|XP_002528446.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223532122|gb|EEF33929.1| RNA and export factor binding protein, putative [Ricinus communis]
Length = 149
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 66/83 (79%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E KLY+SNL V++ DI+ LFS++GEL+ ++H+DK+GR G+AEVV+AR+ DA AA
Sbjct: 62 ESEAKLYISNLDYDVSSKDIKLLFSDVGELRSQSVHYDKSGRSKGTAEVVFARQIDALAA 121
Query: 156 LKRYNNVLLDGKPMKIEVVGTNA 178
+K+YNN+ LDGKPM IE+VG ++
Sbjct: 122 MKKYNNLPLDGKPMIIELVGADS 144
>gi|56759476|gb|AAW27878.1| SJCHGC01511 protein [Schistosoma japonicum]
gi|226470454|emb|CAX70507.1| THO complex subunit 4 [Schistosoma japonicum]
gi|226486952|emb|CAX75341.1| THO complex subunit 4 [Schistosoma japonicum]
gi|226486954|emb|CAX75342.1| THO complex subunit 4 [Schistosoma japonicum]
gi|226486956|emb|CAX75343.1| THO complex subunit 4 [Schistosoma japonicum]
Length = 213
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 78/121 (64%), Gaps = 5/121 (4%)
Query: 73 TRNFP--WQHDLFED--SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
+R+ P WQHD+F+D S + AG +G T+L++SNL GV NDDI ELF E G +++
Sbjct: 48 SRSLPDKWQHDMFQDARSPKGAGTTG-GSATRLHISNLDFGVNNDDINELFREFGAIRKA 106
Query: 129 AIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNV 188
+H+D++GR G+AEVV+ A A YN V LDG+PM I++VG AE + +R +
Sbjct: 107 TVHYDRSGRSLGTAEVVFINPLSATKAKNHYNGVPLDGRPMVIQLVGAAAEATVTSRPRI 166
Query: 189 T 189
T
Sbjct: 167 T 167
>gi|348558286|ref|XP_003464949.1| PREDICTED: THO complex subunit 4-like [Cavia porcellus]
Length = 364
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 77/122 (63%), Gaps = 10/122 (8%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLF+ G KL VSNL GV++ DI+E
Sbjct: 181 RPAPYS------RPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQE 232
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V +
Sbjct: 233 LFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQ 292
Query: 178 AE 179
E
Sbjct: 293 IE 294
>gi|157311703|ref|NP_001098578.1| THO complex subunit 4 [Danio rerio]
gi|156230508|gb|AAI51965.1| Zgc:171753 protein [Danio rerio]
Length = 280
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 19/145 (13%)
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGT---------KLYVSNLH 107
+RP+ Y+ R + P WQHDLF++ + G G KL VSNL
Sbjct: 80 SRPAPYS------RPKQLPDKWQHDLFDNGYSSNAGGGGGGGGGGAGVETGGKLLVSNLD 133
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+
Sbjct: 134 FGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGR 193
Query: 168 PMKIEVVGTNAEIPLQARVNVTGVN 192
PM I++V ++I Q R + G+N
Sbjct: 194 PMNIQLV--TSQIDAQRRTPMQGLN 216
>gi|221221906|gb|ACM09614.1| THO complex subunit 4 [Salmo salar]
Length = 263
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 28/212 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRG------ 54
MA +DMSLDDIIK ++ G RGRGRG G G A G
Sbjct: 1 MADKMDMSLDDIIKQNRQQRGGAGGRGGGRGRGRGGSGGGRGGGVGRGAAGGFGGRGGGS 60
Query: 55 -PLSN--------ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGT---K 100
P+ N ARP+ Y+ R + P WQHD++ + A + G K
Sbjct: 61 GPMRNRPNLSRGRARPTPYS------RPKQLPDKWQHDMYGNHGFNASVGGGAGVETGGK 114
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L VSNL GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN
Sbjct: 115 LLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYN 174
Query: 161 NVLLDGKPMKIEVVGTNAEIPLQARVNVTGVN 192
V LDG+PM I++V ++I Q R + G+N
Sbjct: 175 GVPLDGRPMNIQLV--TSQIDTQRRPPMQGMN 204
>gi|410902089|ref|XP_003964527.1| PREDICTED: THO complex subunit 4-A-like [Takifugu rubripes]
Length = 265
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 111/213 (52%), Gaps = 39/213 (18%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRG----PL 56
M +DMSLDDIIK ++ GR R GRG GG G RG P+
Sbjct: 1 MTDKLDMSLDDIIKQNRQQRGGGRGGRGRGRGVSGRGGGVGRLGGGGGGFGNRGGGSGPM 60
Query: 57 SN--------ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGT------- 99
N RP+ Y+ R + P WQHD+F++ G SG
Sbjct: 61 RNRQNLNRGRGRPTPYS------RPKQLPDKWQHDMFDN-----GFSGFNGVASGGGAGV 109
Query: 100 ----KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + RR+DA A
Sbjct: 110 ETGGKLLVSNLDFGVSDADIQELFAEFGILKKAAVHYDRSGRSLGTADVHFERRADALKA 169
Query: 156 LKRYNNVLLDGKPMKIEVVGTNAEI---PLQAR 185
+K+YN + LDG+PM I++V + + P+Q R
Sbjct: 170 MKQYNGIPLDGRPMNIQLVTSQIDTQRRPMQGR 202
>gi|432868529|ref|XP_004071583.1| PREDICTED: THO complex subunit 4-A-like [Oryzias latipes]
Length = 268
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 113/209 (54%), Gaps = 32/209 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAAR-------- 52
MA +DMSLDDIIK ++S GR R G G G + G
Sbjct: 1 MADKMDMSLDDIIKLNRQSRGGARGGRGRGRGGSGGARGGGLGRLGGGGGGFGGRGGGSG 60
Query: 53 ----RGPLSNAR--PSSYTIAKSFRRTRNFP--WQHDLFEDSL-------RAAGISGIEV 97
R LS AR P+ Y+ R + P WQHD+F++ G +G+E
Sbjct: 61 PMRTRQNLSRARGRPTPYS------RPKQLPDKWQHDMFDNGFSGFNGAAGGGGGAGVET 114
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + RR+DA A+K
Sbjct: 115 GGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMK 174
Query: 158 RYNNVLLDGKPMKIEVVGTNAEI---PLQ 183
+YN + LDG+PM I++V + + P+Q
Sbjct: 175 QYNGIPLDGRPMNIQLVTSQIDTQRRPMQ 203
>gi|351706421|gb|EHB09340.1| THO complex subunit 4 [Heterocephalus glaber]
Length = 209
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 82/137 (59%), Gaps = 6/137 (4%)
Query: 45 GRMTGAARRGPLSNARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLY 102
GR+ + R AR + + F + + P WQHDLF+ G KL
Sbjct: 6 GRIWASVRASSSQQARLTGLFLL--FFQPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLL 61
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNV 162
VSNL GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V
Sbjct: 62 VSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGV 121
Query: 163 LLDGKPMKIEVVGTNAE 179
LDG+PM I++V + E
Sbjct: 122 PLDGRPMNIQLVTSQIE 138
>gi|307200277|gb|EFN80545.1| THO complex subunit 4 [Harpegnathos saltator]
Length = 248
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 105/195 (53%), Gaps = 25/195 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGS---------VSGGRMTGAA 51
M ++MSLDDIIK K + G G R G+ V GR G
Sbjct: 1 MVDKIEMSLDDIIKQTKGARARGGGGGRRGRGAGSSARRGTRRTPRTGGGVMRGRNRGGI 60
Query: 52 RRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGI-EVGT-KLYVSNLHPG 109
R L YT R N W+HD+F D ++ G I VGT KL VSNL G
Sbjct: 61 TRASLP------YT-----RGDVNSAWKHDMF-DGVKKVGRGAIGNVGTTKLLVSNLDFG 108
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPM 169
V++ DI+ELFSE G LK A+H+D++GR GSA+V++ RR+DA A+K+Y+ V LDG+ M
Sbjct: 109 VSDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIFERRADAIKAMKQYHGVPLDGREM 168
Query: 170 KIEVVGTNAEIPLQA 184
I+V +E+P+ +
Sbjct: 169 NIQV--ATSELPITS 181
>gi|357467585|ref|XP_003604077.1| UDP-D-apiose/UDP-D-xylose synthase [Medicago truncatula]
gi|355493125|gb|AES74328.1| UDP-D-apiose/UDP-D-xylose synthase [Medicago truncatula]
Length = 182
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 56/63 (88%)
Query: 140 GSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTV 199
GS EVVY RRSDAFAALKRYNNVLLDGKPMKIE+VGTN+E+ + ARVNV+ +N +RK+T
Sbjct: 118 GSFEVVYNRRSDAFAALKRYNNVLLDGKPMKIEIVGTNSELSVTARVNVSAMNRQRKKTF 177
Query: 200 VMT 202
VMT
Sbjct: 178 VMT 180
>gi|334322981|ref|XP_001370691.2| PREDICTED: THO complex subunit 4-like [Monodelphis domestica]
Length = 459
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 104/195 (53%), Gaps = 24/195 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN-- 58
MA +DMSLDDIIK + RG GR R G G G + + GP+ N
Sbjct: 202 MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGAQGGRGGGGAQAAARVSRGGGPIRNRP 261
Query: 59 ------------ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVS 104
RP+ Y+ R + P WQHDLF+ G KL VS
Sbjct: 262 AMARGGAGGGGRNRPAPYS------RPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVS 313
Query: 105 NLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLL 164
NL GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V L
Sbjct: 314 NLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPL 373
Query: 165 DGKPMKIEVVGTNAE 179
DG+PM I++V + +
Sbjct: 374 DGRPMNIQLVTSQID 388
>gi|157108771|ref|XP_001650379.1| RNA and export factor binding protein [Aedes aegypti]
gi|157110681|ref|XP_001651200.1| RNA and export factor binding protein [Aedes aegypti]
gi|108868361|gb|EAT32586.1| AAEL015263-PA [Aedes aegypti]
gi|108879221|gb|EAT43446.1| AAEL005114-PA [Aedes aegypti]
Length = 261
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 112/214 (52%), Gaps = 40/214 (18%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRG----------------PSGSVSG 44
M ++MSLDDIIKS +KS+R G+G + G RG G + G
Sbjct: 1 MVDKIEMSLDDIIKS-QKSQRGGGRGGLNKSGGPPRGNVNRSRNGGGGGFRQNRGGPMGG 59
Query: 45 GRMTGAARRGPLSNARPSSYTIAKSFRRTR---NFPWQHDLFEDSLR---------AAGI 92
G + G R G I ++ + +R N W+HD++E + + G+
Sbjct: 60 GVLKGRNRGG-----------IQRTTKFSRGDVNSAWKHDMYEGARKNRLLAAAGLGGGV 108
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
G +KL VSNL GV+ DI ELF++ G LK ++H+D++GR G+A+VV+ RR+DA
Sbjct: 109 GGGLGSSKLMVSNLDFGVSESDINELFADFGPLKSASVHYDRSGRSLGTADVVFERRADA 168
Query: 153 FAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARV 186
A+K+YN V LDG+PM I++ + P RV
Sbjct: 169 IKAMKQYNGVPLDGRPMSIQLATSEIPAPRAPRV 202
>gi|358341495|dbj|GAA49160.1| THO complex subunit 4 [Clonorchis sinensis]
Length = 466
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 97/178 (54%), Gaps = 29/178 (16%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D+SLDDII +R R Q R GRGR RG + + G R G ARR AR
Sbjct: 1 MDLSLDDII------QRNRKQPR---GRGRARG-ANPLRGVRRGGIARRSTGGGAR---- 46
Query: 65 TIAKSFRRTRNFPWQHDLFEDSLRAAGISG--IEVGTKLYVSNLHPGVTNDDIRELFSEI 122
+ + WQHD+F+ G G V KL++SNL GV+NDDI ELF E
Sbjct: 47 VLPEK--------WQHDMFQ-----GGRDGRQTSVSNKLHISNLDFGVSNDDINELFREF 93
Query: 123 GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI 180
G ++R A+H+D++GR G+AEVV+ A A YN V LDG+PM I++VG I
Sbjct: 94 GAIRRAAVHYDRSGRSLGTAEVVFLNPLSATKARSHYNGVPLDGRPMVIQLVGAVESI 151
>gi|119610105|gb|EAW89699.1| THO complex 4 [Homo sapiens]
Length = 239
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 77/122 (63%), Gaps = 10/122 (8%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLF+ G KL VSNL GV++ DI+E
Sbjct: 55 RPAPYS------RPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQE 106
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V +
Sbjct: 107 LFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQ 166
Query: 178 AE 179
+
Sbjct: 167 ID 168
>gi|332849328|ref|XP_001165277.2| PREDICTED: THO complex subunit 4 [Pan troglodytes]
Length = 264
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 77/122 (63%), Gaps = 10/122 (8%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLF+ G KL VSNL GV++ DI+E
Sbjct: 80 RPAPYS------RPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQE 131
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V +
Sbjct: 132 LFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQ 191
Query: 178 AE 179
+
Sbjct: 192 ID 193
>gi|198455576|ref|XP_001360055.2| GA10707 [Drosophila pseudoobscura pseudoobscura]
gi|198133305|gb|EAL29208.2| GA10707 [Drosophila pseudoobscura pseudoobscura]
Length = 284
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
Query: 67 AKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELK 126
AK R N W+HD+++ R A SG T L V+NL GV+N DI+ELF+E G +K
Sbjct: 91 AKFARGDVNSAWKHDMYDGPKRGAPSSG-SGPTLLIVNNLDYGVSNSDIKELFNEFGPIK 149
Query: 127 RYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
+ A+H+D++GR G+A+V++ RR+DA A+K+YN V LDG+PM I++ ++
Sbjct: 150 KAAVHYDRSGRSLGTADVIFERRTDALKAIKQYNGVPLDGRPMTIQLAVSDV 201
>gi|195158116|ref|XP_002019940.1| GL12678 [Drosophila persimilis]
gi|194116531|gb|EDW38574.1| GL12678 [Drosophila persimilis]
Length = 284
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
Query: 67 AKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELK 126
AK R N W+HD+++ R A SG T L V+NL GV+N DI+ELF+E G +K
Sbjct: 91 AKFARGDVNSAWKHDMYDGPKRGAPSSG-SGPTLLIVNNLDYGVSNSDIKELFNEFGPIK 149
Query: 127 RYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
+ A+H+D++GR G+A+V++ RR+DA A+K+YN V LDG+PM I++ ++
Sbjct: 150 KAAVHYDRSGRSLGTADVIFERRTDALKAIKQYNGVPLDGRPMTIQLAVSDV 201
>gi|346466955|gb|AEO33322.1| hypothetical protein [Amblyomma maculatum]
Length = 202
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 85/133 (63%), Gaps = 10/133 (7%)
Query: 52 RRGPLS-NARPSSYTIAKSFRRTRNFP--WQHDLFE-----DSLRAAGISGIEVGTKLYV 103
RRG L AR Y A+ F +T+ P WQHD+++ +L +KL V
Sbjct: 1 RRGTLRGRARQQPY--ARGFTQTKEIPDRWQHDMYDGVGARRALSGGLGGAGMGPSKLLV 58
Query: 104 SNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVL 163
SNL GV++ DI+ELF+E G L++ A+H+D++GR G+A+VV+ RR+DA A+K+YN V
Sbjct: 59 SNLDYGVSDADIKELFAEFGPLRKAAVHYDRSGRSLGTADVVFERRTDAVRAMKQYNGVP 118
Query: 164 LDGKPMKIEVVGT 176
LDG+PM I++V +
Sbjct: 119 LDGRPMNIQLVTS 131
>gi|195454362|ref|XP_002074207.1| GK12741 [Drosophila willistoni]
gi|194170292|gb|EDW85193.1| GK12741 [Drosophila willistoni]
Length = 280
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 78/114 (68%), Gaps = 2/114 (1%)
Query: 67 AKSFRRTRNFPWQHDLFEDSLR--AAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGE 124
AK R N W+HD+++ R AAG S + T+L V NL GV+N DI+ELF++ G
Sbjct: 87 AKFARGDVNSAWKHDMYDGPKRRAAAGGSSLPGPTRLIVGNLDYGVSNMDIKELFNDFGP 146
Query: 125 LKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
+K+ A+H+D++GR G+A+V++ RRSDA A+K+Y+ V LDG+PM I++ ++
Sbjct: 147 MKKAAVHYDRSGRSLGTADVIFERRSDALKAIKQYHGVPLDGRPMTIQLAVSDV 200
>gi|383414995|gb|AFH30711.1| THO complex subunit 4 [Macaca mulatta]
Length = 261
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 84 YSRPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKK 141
Query: 128 YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 142 AAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 193
>gi|386781883|ref|NP_001247942.1| Aly/REF export factor [Macaca mulatta]
gi|402901381|ref|XP_003913629.1| PREDICTED: THO complex subunit 4 [Papio anubis]
gi|383414993|gb|AFH30710.1| THO complex subunit 4 [Macaca mulatta]
Length = 264
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 84 YSRPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKK 141
Query: 128 YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 142 AAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 193
>gi|238776833|ref|NP_005773.3| THO complex subunit 4 [Homo sapiens]
Length = 264
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 84 YSRPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKK 141
Query: 128 YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 142 AAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 193
>gi|297702053|ref|XP_002828006.1| PREDICTED: THO complex subunit 4 [Pongo abelii]
Length = 264
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 84 YSRPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKK 141
Query: 128 YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 142 AAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 193
>gi|443688940|gb|ELT91463.1| hypothetical protein CAPTEDRAFT_161051 [Capitella teleta]
Length = 161
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 62/81 (76%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G KL VSNL GV + DIRELF+E G LK+ AIH+D++GR G+AE+++ RSDA A+K
Sbjct: 6 GGKLLVSNLEFGVNDADIRELFAEFGHLKKAAIHYDRSGRSIGTAEIIFELRSDAVKAMK 65
Query: 158 RYNNVLLDGKPMKIEVVGTNA 178
+YNNV LDG+PMKI++V A
Sbjct: 66 QYNNVPLDGRPMKIQLVSDGA 86
>gi|332266437|ref|XP_003282213.1| PREDICTED: THO complex subunit 4 isoform 1 [Nomascus leucogenys]
gi|426346309|ref|XP_004040822.1| PREDICTED: THO complex subunit 4 [Gorilla gorilla gorilla]
gi|441676608|ref|XP_004092687.1| PREDICTED: THO complex subunit 4 isoform 2 [Nomascus leucogenys]
gi|410305978|gb|JAA31589.1| THO complex 4 [Pan troglodytes]
Length = 264
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 84 YSRPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKK 141
Query: 128 YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 142 AAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 193
>gi|339241051|ref|XP_003376451.1| THO complex subunit 4 [Trichinella spiralis]
gi|316974832|gb|EFV58304.1| THO complex subunit 4 [Trichinella spiralis]
Length = 199
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHD F ++ G + +L VSNL+ VTNDD++ELF +G +++ A+H+D+ GR
Sbjct: 30 WQHDKFH-AINGFGGKSLAAPAQLLVSNLNFNVTNDDVKELFQGMGAVRKAAVHYDERGR 88
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
G A+VVY RR DA ALK +NN+ LDG+PM+IE+V
Sbjct: 89 SMGLADVVYHRRVDAMRALKEFNNIKLDGRPMRIEMV 125
>gi|241152158|ref|XP_002406835.1| THO complex subunit, putative [Ixodes scapularis]
gi|215493941|gb|EEC03582.1| THO complex subunit, putative [Ixodes scapularis]
Length = 327
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 81/117 (69%), Gaps = 6/117 (5%)
Query: 68 KSFRRTRNFP--WQHDLFED--SLRAAG-ISGIEVG-TKLYVSNLHPGVTNDDIRELFSE 121
+ + R + P WQHD+FE + R G + G G +KL VSNL GV++ DI+ELF+E
Sbjct: 139 QPYARPKELPDRWQHDMFEGVGTRRTLGALGGTTAGPSKLLVSNLDYGVSDADIKELFAE 198
Query: 122 IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
G L++ A+H+D++GR G+A+VV+ RR+D+ A+K+YN V LDG+PM I++V ++
Sbjct: 199 FGPLRKAAVHYDRSGRSLGTADVVFERRTDSVRAMKQYNGVPLDGRPMNIQLVTSSV 255
>gi|48429165|sp|Q86V81.3|THOC4_HUMAN RecName: Full=THO complex subunit 4; Short=Tho4; AltName: Full=Ally
of AML-1 and LEF-1; AltName: Full=Aly/REF export factor;
AltName: Full=Transcriptional coactivator Aly/REF;
AltName: Full=bZIP-enhancing factor BEF
gi|30411083|gb|AAH52302.1| THO complex 4 [Homo sapiens]
gi|190689331|gb|ACE86440.1| THO complex 4 protein [synthetic construct]
gi|190690681|gb|ACE87115.1| THO complex 4 protein [synthetic construct]
Length = 257
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 77 YSRPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKK 134
Query: 128 YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 135 AAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 186
>gi|78369418|ref|NP_001030494.1| THO complex subunit 4 [Bos taurus]
gi|122145089|sp|Q3T0I4.1|THOC4_BOVIN RecName: Full=THO complex subunit 4; Short=Tho4; AltName: Full=Ally
of AML-1 and LEF-1; AltName: Full=Aly/REF export factor;
AltName: Full=Transcriptional coactivator Aly/REF;
AltName: Full=bZIP-enhancing factor BEF
gi|74267952|gb|AAI02385.1| THO complex 4 [Bos taurus]
gi|296476142|tpg|DAA18257.1| TPA: THO complex subunit 4 [Bos taurus]
Length = 257
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 77 YSRPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKK 134
Query: 128 YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 135 AAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 186
>gi|301754193|ref|XP_002912986.1| PREDICTED: THO complex subunit 4-like [Ailuropoda melanoleuca]
Length = 239
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 90/144 (62%), Gaps = 13/144 (9%)
Query: 46 RMTGAARRGPLSN-ARPSSYTIAKSFRRTRN-------FP--WQHDLFEDSLRAAGISGI 95
++T ++ +G + ARP++ +++ F R R+ P WQHDLF+
Sbjct: 29 QLTTSSHQGTTTQPARPAAL-VSEGFGRCRHHWSRPKQLPDKWQHDLFDSGFGGGAGVE- 86
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A
Sbjct: 87 -TGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKA 145
Query: 156 LKRYNNVLLDGKPMKIEVVGTNAE 179
+K+YN V LDG+PM I++V + +
Sbjct: 146 MKQYNGVPLDGRPMNIQLVTSQID 169
>gi|348533153|ref|XP_003454070.1| PREDICTED: THO complex subunit 4-like [Oreochromis niloticus]
Length = 278
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 86/136 (63%), Gaps = 18/136 (13%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSL-------RAAGISGIEVGTKLYVSNLHPGV 110
RP+ Y+ R + P WQHD+F++ G +G+E G KL VSNL GV
Sbjct: 76 RPTPYS------RPKQLPDKWQHDMFDNGFSGFNGAAGGGGGAGVETGGKLLVSNLDFGV 129
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMK 170
++ DI+ELF+E G LK+ A+H+D++GR G+A+V + RR+DA A+K+YN + LDG+PM
Sbjct: 130 SDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMKQYNGIPLDGRPMN 189
Query: 171 IEVVGTNAEI---PLQ 183
I++V + + P+Q
Sbjct: 190 IQLVTSQIDTQRRPMQ 205
>gi|355754465|gb|EHH58430.1| hypothetical protein EGM_08282, partial [Macaca fascicularis]
Length = 178
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
F + + P WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 1 FLQPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKK 58
Query: 128 YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 59 AAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 110
>gi|355569026|gb|EHH25307.1| hypothetical protein EGK_09105, partial [Macaca mulatta]
Length = 178
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
F + + P WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 1 FLQPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKK 58
Query: 128 YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 59 AAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 110
>gi|47219626|emb|CAG02671.1| unnamed protein product [Tetraodon nigroviridis]
Length = 265
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 114/207 (55%), Gaps = 30/207 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRG----PL 56
MA +DMSLDDII+ ++ GR R G GRG GG G RG P+
Sbjct: 1 MADKLDMSLDDIIRQNRQQRGGGRGGRGRGRGGIGRGGGVGRLGGGGGGFGNRGGGSGPM 60
Query: 57 SN--------ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLR-------AAGISGIEVGT 99
N RP+ Y+ R + P WQHD+F++ G +G+E G
Sbjct: 61 RNRQNLNRGRGRPTPYS------RPKQLPDKWQHDMFDNGFNGFNSVAGGGGGAGVETGG 114
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + RR DA A+K+Y
Sbjct: 115 KLLVSNLDFGVSDADIQELFAEFGILKKAAVHYDRSGRSLGTADVHFERRVDALKAMKQY 174
Query: 160 NNVLLDGKPMKIEVVGTNAEI---PLQ 183
N V LDG+PM I++V + + P+Q
Sbjct: 175 NGVPLDGRPMNIQLVTSQIDTQRRPMQ 201
>gi|410982020|ref|XP_003997362.1| PREDICTED: THO complex subunit 4 [Felis catus]
Length = 220
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 50 WQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 107
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 108 SLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 149
>gi|395512140|ref|XP_003760302.1| PREDICTED: RNA and export factor-binding protein 2-like
[Sarcophilus harrisii]
Length = 363
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 20/187 (10%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGA--ARR-----GPLS 57
+D+SLDDI K +S+R + G R R R +G+ G + GA A R GP+
Sbjct: 108 MDISLDDINK-LNRSQRGQCGGDRDRHWDRERDRAGAQGGRDVWGAQVAARISRGGGPVR 166
Query: 58 NARPSSYTIAKSFRRTRNFPW----------QHDLFEDSLRAAGISGIEVGTKLYVSNLH 107
N + + A R R P+ Q D+F L G +E G KL +SNL
Sbjct: 167 NRQAMARGGASGGSRNRPAPYSQPKRLPHKGQPDVFHSDL--GGRPVLETGAKLLISNLD 224
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
GV+N DI+ELF+ G LK+ A+H+D++GR G+A+V + R++DA A+KRY+ V LD +
Sbjct: 225 CGVSNADIQELFAACGTLKKAALHYDRSGRSLGTADVHFERKADALKAMKRYHGVTLDDR 284
Query: 168 PMKIEVV 174
PM I++V
Sbjct: 285 PMNIQLV 291
>gi|340371931|ref|XP_003384498.1| PREDICTED: THO complex subunit 4-like [Amphimedon queenslandica]
Length = 246
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 70/102 (68%), Gaps = 7/102 (6%)
Query: 78 WQHDLFEDSLRAAGISGIEV-----GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHF 132
WQHD+++ G + ++ GTKL +SNL GV++DDI+ELF E G L++ +H+
Sbjct: 69 WQHDMYQGDFN--GSAQVQTPAKSGGTKLLISNLDYGVSDDDIKELFREFGRLRKAEVHY 126
Query: 133 DKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
DK+GR G+A+V++ R DA A+K+YN V LDG+PM I+++
Sbjct: 127 DKSGRSVGTAQVIFERNVDALKAVKQYNGVPLDGRPMSIQLM 168
>gi|440897688|gb|ELR49328.1| THO complex subunit 4, partial [Bos grunniens mutus]
Length = 178
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
F + + P WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 1 FPQPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKK 58
Query: 128 YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 59 AAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 110
>gi|395826774|ref|XP_003786590.1| PREDICTED: THO complex subunit 4 [Otolemur garnettii]
Length = 181
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 13 WQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 70
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 71 SLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 112
>gi|395533243|ref|XP_003768670.1| PREDICTED: uncharacterized protein LOC100925707 [Sarcophilus
harrisii]
Length = 372
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 202 WQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 259
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 260 SLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 301
>gi|344250156|gb|EGW06260.1| THO complex subunit 4 [Cricetulus griseus]
Length = 187
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 11 WQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 68
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 69 SLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 110
>gi|355724133|gb|AES08120.1| THO complex subunit 4 [Mustela putorius furo]
Length = 178
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 8 WQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 65
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 66 SLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 107
>gi|354469136|ref|XP_003496986.1| PREDICTED: THO complex subunit 4-like [Cricetulus griseus]
Length = 212
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 43 WQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 100
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 101 SLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 142
>gi|194741450|ref|XP_001953202.1| GF17326 [Drosophila ananassae]
gi|190626261|gb|EDV41785.1| GF17326 [Drosophila ananassae]
Length = 275
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 38/204 (18%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGR--------------------------ARRGRGR 34
M ++MSLDDIIKS + ++ +G R+
Sbjct: 1 MVDKIEMSLDDIIKSNRTQKKPQGGRGGGPGGARRPGGPQRFAGARRGAAGGSPRKPGPA 60
Query: 35 GRGPSGSVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISG 94
G V GR G A P + +K R N W+HD+++ R A +G
Sbjct: 61 SGSAGGGVLKGRRPGGA---------PGAVQKSKFPRGDVNSAWKHDMYDGPKRGAPGTG 111
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
T+L V NL GV+N DI+ELF++ G +K+ A+H+D++GR G+A+V++ RR DA
Sbjct: 112 ---PTRLIVGNLDYGVSNTDIKELFNDFGPMKKAAVHYDRSGRSLGTADVIFERRGDALK 168
Query: 155 ALKRYNNVLLDGKPMKIEVVGTNA 178
A+K+Y+ V LDG+PM I++ ++
Sbjct: 169 AIKQYHGVPLDGRPMTIQLAVSDV 192
>gi|452821093|gb|EME28127.1| hypothetical protein isoform 2 [Galdieria sulphuraria]
Length = 215
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 98/172 (56%), Gaps = 12/172 (6%)
Query: 5 VDMSLDDII-KSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSS 63
+D SLDD+I + +KKS+ + G+ R+G G SVS GR+ +
Sbjct: 4 LDKSLDDLINEQKKKSKGNKSIGKNRKG-NLGASKKLSVSNGRIGKKRM------GKKMM 56
Query: 64 YTIAKSFRRTRNFPWQHDLFEDSLRAAGISGI-EVGTKLYVSNLHPGVTNDDIRELFSEI 122
I + R W+HD F+ ++G T++ V+NL GVTN DI +LFSE+
Sbjct: 57 MDIDQDISGKR---WRHDKFKSGKSSSGDQPKRNQITRVQVTNLALGVTNKDINDLFSEV 113
Query: 123 GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
G++++ + FD+NGR +G A+VV+ R+ A A+KRYN V LDGKPMK+ +V
Sbjct: 114 GKMRQAFVKFDRNGRSTGIAQVVFYDRASALEAIKRYNGVPLDGKPMKLSLV 165
>gi|281348647|gb|EFB24231.1| hypothetical protein PANDA_000701 [Ailuropoda melanoleuca]
Length = 175
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 9 WQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 66
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 67 SLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 108
>gi|209733738|gb|ACI67738.1| THO complex subunit 4 [Salmo salar]
gi|303667317|gb|ADM16268.1| THO complex subunit 4 [Salmo salar]
Length = 267
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 109/214 (50%), Gaps = 34/214 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRG------ 54
MA +DMSLDDIIK ++ G R G G G
Sbjct: 1 MADKMDMSLDDIIKQNRQQRGGAGGRGGRGRGRGGSGGGRGGGGVGRGTTGGGFGGRGGG 60
Query: 55 --PLSN--------ARPSSYTIAKSFRRTRNFP--WQHDLF------EDSLRAAGISGIE 96
P+ N ARP+ Y+ R + P WQHD++ + G +G+E
Sbjct: 61 SGPMRNRPNLSRGRARPTPYS------RPKQLPDKWQHDMYGNHGFNASVGGSGGGAGVE 114
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+
Sbjct: 115 TGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAM 174
Query: 157 KRYNNVLLDGKPMKIEVVGTNAEI----PLQARV 186
K+YN V LDG+PM I++V + + P+Q +
Sbjct: 175 KQYNGVPLDGRPMNIQLVTSQIDTQRRPPMQGMI 208
>gi|2896146|gb|AAD09608.1| transcriptional coactivator ALY, partial [Homo sapiens]
Length = 233
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 71/112 (63%), Gaps = 4/112 (3%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 53 YSRPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKK 110
Query: 128 YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
A+H+D++GR G+A V + R++DA A+K+YN LDG+PM I++V + +
Sbjct: 111 AAVHYDRSGRSLGTANVHFERKADALKAMKQYNGFPLDGRPMNIQLVTSQID 162
>gi|431908644|gb|ELK12236.1| Rho GDP-dissociation inhibitor 1, partial [Pteropus alecto]
Length = 413
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 8 WQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 65
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
G+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 66 SLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 107
>gi|193788709|ref|NP_001123294.1| THO complex 4 [Nasonia vitripennis]
Length = 270
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 100/199 (50%), Gaps = 32/199 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQG------------------RARRGRGRGRGPSGSV 42
M ++MSLDDIIK K S G RA RG R P G V
Sbjct: 1 MTAKMEMSLDDIIKQNKTSRPRTGGKRGGGAGGAGRKPAGGSPRRAPASRGGARKPGGGV 60
Query: 43 SGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLY 102
GR G R ++ PS S++R + L + R G S TKL
Sbjct: 61 MRGRSRGGITR----SSGPSFGRSLPSYKR------EAFLGTSAPRRYGSS--SDATKLI 108
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNV 162
VSNL GVT+ DI ELFSE G LK +H+D++GR GSA++++ RR+DA A+K+YN V
Sbjct: 109 VSNLDFGVTDSDILELFSEFGPLKHAGVHYDRSGRSIGSADLLFERRADAIKAMKQYNGV 168
Query: 163 LLDGKPMKIEVVGTNAEIP 181
LDG+ M I++ +EIP
Sbjct: 169 PLDGREMNIQLA--TSEIP 185
>gi|170043665|ref|XP_001849498.1| RNA and export factor binding protein [Culex quinquefasciatus]
gi|167867015|gb|EDS30398.1| RNA and export factor binding protein [Culex quinquefasciatus]
Length = 290
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 75/125 (60%), Gaps = 13/125 (10%)
Query: 75 NFPWQHDLFEDSLRA-------------AGISGIEVGTKLYVSNLHPGVTNDDIRELFSE 121
N W+HD++E + ++ G G TKL VSNL GV+ DI ELF++
Sbjct: 89 NSAWKHDMYEGARKSRLLAAAGLGGGLGGGGPGGLGSTKLMVSNLDFGVSESDINELFAD 148
Query: 122 IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIP 181
G LK ++H+D++GR G+A+VV+ RR+DA A+K+YN V LDG+PM I++ + +P
Sbjct: 149 FGPLKSASVHYDRSGRSLGTADVVFERRADAIKAMKQYNGVPLDGRPMSIQLATSEIPVP 208
Query: 182 LQARV 186
R+
Sbjct: 209 RAPRL 213
>gi|326930798|ref|XP_003211528.1| PREDICTED: THO complex subunit 4-like, partial [Meleagris
gallopavo]
Length = 160
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 66/87 (75%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G+E G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA
Sbjct: 3 AGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADA 62
Query: 153 FAALKRYNNVLLDGKPMKIEVVGTNAE 179
A+K+YN V LDG+PM I++V + +
Sbjct: 63 LKAMKQYNGVPLDGRPMNIQLVTSQID 89
>gi|326499215|dbj|BAK06098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 313
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 82/160 (51%), Gaps = 33/160 (20%)
Query: 116 RELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
+ELFSEIGELKRY++++DK+G+ GSAEVV+AR+ DA A++RYN VLLDGKPMKIE++G
Sbjct: 165 QELFSEIGELKRYSVNYDKDGKSQGSAEVVFARKVDALDAIERYNGVLLDGKPMKIELIG 224
Query: 176 TNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLR------- 228
E ++ S S N N P S +RGG R
Sbjct: 225 NKTE-------------PHPTEPLMYNSASSN------YNATPNSLHQRGGPRGLFHGNN 265
Query: 229 ------RSSQGRGRGQGQGRGR-GRGGGGGGGRGRGRGRG 261
RG QG G GGGRG+G RG
Sbjct: 266 GRSGGSGQGGAGKRGMFQGNVHPGNAVQDGGGRGQGTARG 305
>gi|195109702|ref|XP_001999422.1| GI23076 [Drosophila mojavensis]
gi|193916016|gb|EDW14883.1| GI23076 [Drosophila mojavensis]
Length = 277
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 71/104 (68%)
Query: 75 NFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
N W+HD+++ R + T+L V NL GV+N DI+ELF++ G +K+ A+H+D+
Sbjct: 95 NSAWKHDMYDGPKRNSSAGNSTGPTRLIVGNLDYGVSNTDIKELFNDFGPMKKAAVHYDR 154
Query: 135 NGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
+GR G+A+V++ RRSDA A+K+Y+ V LDG+PM I++ ++
Sbjct: 155 SGRSLGTADVIFERRSDALKAIKQYHGVPLDGRPMTIQLAVSDV 198
>gi|34810642|pdb|1NO8|A Chain A, Solution Structure Of The Nuclear Factor Aly Rbd Domain
Length = 106
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 71/107 (66%), Gaps = 4/107 (3%)
Query: 72 RTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYA 129
R + P WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+ A
Sbjct: 2 RPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKKAA 59
Query: 130 IHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V +
Sbjct: 60 VHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 106
>gi|221222184|gb|ACM09753.1| THO complex subunit 4 [Salmo salar]
Length = 214
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 78/118 (66%), Gaps = 5/118 (4%)
Query: 78 WQHDLFEDSLRAAGISGIEVGT---KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
WQHD++ + A + G KL VSNL GV++ DI+ELF+E G LK+ A+H+D+
Sbjct: 40 WQHDMYGNHGFNASVGGGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR 99
Query: 135 NGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVN 192
+GR G+A+V + R++DA A+K+YN V LDG+PM I++V ++I Q R + G+N
Sbjct: 100 SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV--TSQIDTQRRPPMQGMN 155
>gi|91090428|ref|XP_971598.1| PREDICTED: similar to RNA and export factor binding protein
[Tribolium castaneum]
gi|270013379|gb|EFA09827.1| hypothetical protein TcasGA2_TC011974 [Tribolium castaneum]
Length = 234
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 74/117 (63%), Gaps = 8/117 (6%)
Query: 75 NFPWQHDLFE-----DSLRAAGISGIEVG-TKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
N W+HDLFE A + VG TKL V NL V++ DI+ELF+E G LK
Sbjct: 65 NSAWKHDLFEGYGPRKVAAARAVVQSNVGPTKLMVGNLDFAVSDSDIQELFAEFGPLKSA 124
Query: 129 AIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQAR 185
++H+D++GR G+A+V++ RR+DA A+K+YN V LDG+ M I+++ +EIP R
Sbjct: 125 SVHYDRSGRSLGTADVIFERRTDAIKAMKQYNGVPLDGRAMNIQII--TSEIPSPVR 179
>gi|357619208|gb|EHJ71878.1| ALY [Danaus plexippus]
Length = 253
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 75/118 (63%), Gaps = 8/118 (6%)
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDL---FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDI 115
++P++YT R N W+HD+ F D + TKL VSNL GV++ DI
Sbjct: 59 SKPTNYT-----RGDVNSTWKHDMYNDFNDRKIQRSVPLTTGPTKLLVSNLDFGVSDSDI 113
Query: 116 RELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
+ELFSE G LK A+H+D++GR G+A+V++ RR+DA A+K+YN V LDG+ M I++
Sbjct: 114 QELFSEFGILKSAAVHYDRSGRSLGTADVLFERRADALKAMKQYNGVPLDGRAMNIQL 171
>gi|195036702|ref|XP_001989807.1| GH18594 [Drosophila grimshawi]
gi|193894003|gb|EDV92869.1| GH18594 [Drosophila grimshawi]
Length = 274
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 72/105 (68%), Gaps = 1/105 (0%)
Query: 75 NFPWQHDLFEDSLRAAGISGIEVG-TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
N W+HD+++ R + G T+L V NL GV+N DI+ELF++ G +K+ A+H+D
Sbjct: 89 NSAWKHDMYDGPKRNGSSTANSAGPTRLIVGNLDYGVSNTDIKELFNDFGPMKKAAVHYD 148
Query: 134 KNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
++GR G+A+V++ RRSDA A+K+Y+ V LDG+PM I++ ++
Sbjct: 149 RSGRSLGTADVIFERRSDALKAIKQYHGVPLDGRPMTIQLAVSDV 193
>gi|21901961|dbj|BAC05519.1| putative TCF coactivator [Ciona savignyi]
Length = 248
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 104/183 (56%), Gaps = 15/183 (8%)
Query: 1 MATHVDMSLDDIIKSRKKSE-RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA 59
MA +D+SLDDIIK KK++ G+GR R GRG G VS R G
Sbjct: 1 MADKLDLSLDDIIKINKKTKTGGTGRGRGGRRGGRGGASRGGVSQARNKRGGGGGTRGRG 60
Query: 60 RPSS---YTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIE-----VGTKLYVSNLHPGVT 111
R S+ YT K R W+HD+++ A SG++ VG KL VSNL V+
Sbjct: 61 RGSARQPYTRGKIPDR-----WEHDMYKGKSAGAVRSGVDTRGGGVG-KLLVSNLDYAVS 114
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
+ DI ELFSE G L++ A+H+D+ GR GSA+V + R+SDA ALK+YN V LDG+ M+I
Sbjct: 115 DSDITELFSEFGALRKSAVHYDRTGRSLGSADVHFERKSDALRALKQYNEVPLDGRVMQI 174
Query: 172 EVV 174
V
Sbjct: 175 RFV 177
>gi|395518324|ref|XP_003763313.1| PREDICTED: THO complex subunit 4-like, partial [Sarcophilus
harrisii]
Length = 266
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 114/217 (52%), Gaps = 24/217 (11%)
Query: 1 MATHVDMSLDDIIK-SRKKSERERGQGRARRGRGRGRGPSGSVSG--GRMTGAARR---- 53
MA +DMSLDDIIK +R + + G + + R R +G+ G GR A R
Sbjct: 7 MANKMDMSLDDIIKFNRSQRDGCDGDQDQDQDQDRKRSWAGAHGGRNGRSAQIAARQRQG 66
Query: 54 -GPLSN----------ARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLY 102
GP+ N RP+ Y+ K Q DLF+ G G+E GTKL
Sbjct: 67 GGPILNRQAMVRGGGRNRPAPYSPPKQLPDK----GQPDLFDSGFLGGGGPGLETGTKLL 122
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNV 162
+SNL GV + DI+ELF G LK+ A+H+D++G G+A+V + R++DA A+KRY+ V
Sbjct: 123 ISNLDCGVLDADIQELFGAFGTLKKAAVHYDRSGGSLGTADVHFERKADALKAMKRYDGV 182
Query: 163 LLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTV 199
LD +PM +++V + +I Q R +G GR +
Sbjct: 183 TLDDRPMNVQLVLS--QISAQRRPAQSGKRGRMTESC 217
>gi|290561543|gb|ADD38172.1| RNA and export factor-binding protein 2 [Lepeophtheirus salmonis]
Length = 228
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 92/177 (51%), Gaps = 31/177 (17%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSG-GRMTGAARRGPLSNARPSS 63
+++SLDD IK K R R +GP+ +S R AA + P
Sbjct: 1 MNVSLDDYIKQNKAPIRGRS----------FKGPNPKISLRARSKIAAFKSP-------- 42
Query: 64 YTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIG 123
RRT F Q F +R KL++ NLH GV+++DI+ELFSE G
Sbjct: 43 -------RRT--FSIQRQNF---IRTPPKLLPSSPAKLHILNLHFGVSDNDIKELFSEFG 90
Query: 124 ELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI 180
+K+ A+H+DK+GR G+AEV++ + A A YNNV LDG+PM+IE+VG+ +
Sbjct: 91 VIKKSAVHYDKSGRSLGTAEVIFVSLASALKAKNHYNNVPLDGRPMQIELVGSTTLL 147
>gi|260801421|ref|XP_002595594.1| hypothetical protein BRAFLDRAFT_200539 [Branchiostoma floridae]
gi|229280841|gb|EEN51606.1| hypothetical protein BRAFLDRAFT_200539 [Branchiostoma floridae]
Length = 236
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 94/189 (49%), Gaps = 40/189 (21%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M +DMSLDDIIK K P G G A
Sbjct: 1 MTDKMDMSLDDIIKLNK--------------------PGRGGRGRGGGRGRGGGRGRGAT 40
Query: 61 PSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGI----------EVGTKLYVSNLHP 108
P S R ++ P WQHD+F+ + A G G KL +SNL
Sbjct: 41 PYS--------RPQSMPDVWQHDMFDGGVGAGGARRAPQLGGGGTGISTGGKLLISNLDF 92
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
GV++ DI+ELF+E G LK+ A+H+D++GR G+A+VV+ +R+DA A+K+YN V LDG+
Sbjct: 93 GVSDADIKELFAEFGNLKKAAVHYDRSGRSLGTADVVFEKRADAMRAMKQYNGVPLDGRS 152
Query: 169 MKIEVVGTN 177
M I++V +N
Sbjct: 153 MNIQLVTSN 161
>gi|256071333|ref|XP_002571995.1| RNA and export factor binding protein [Schistosoma mansoni]
gi|350645138|emb|CCD60146.1| RNA and export factor binding protein, putative [Schistosoma
mansoni]
Length = 213
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 95/188 (50%), Gaps = 24/188 (12%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGP--LSNARPS 62
+D SL+DII+ ++ RG S+ G R G ARR LS A P
Sbjct: 1 MDQSLEDIIQQKRIRVTRGRGRGRGRG-------GESLRGVRRGGVARRNTNGLSRALPD 53
Query: 63 SYTIAKSFRRTRNFPWQHDLFEDSLRAAG-ISGIEVGTKLYVSNLHPGVTNDDIRELFSE 121
WQHD+F+D G +S T+L++SNL GV NDDI ELF E
Sbjct: 54 K--------------WQHDMFQDGRSPKGSVSTGGNATRLHISNLDFGVNNDDINELFRE 99
Query: 122 IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIP 181
G +++ +H+D++GR G+AEVV+ A A YN V LDG+PM I++VG E
Sbjct: 100 FGAIRKATVHYDRSGRSLGTAEVVFVNPLSATKAKNHYNGVPLDGRPMVIQLVGAAVETA 159
Query: 182 LQARVNVT 189
+ +R VT
Sbjct: 160 VTSRPRVT 167
>gi|240849363|ref|NP_001155655.1| THO complex subunit 4 [Acyrthosiphon pisum]
gi|239788274|dbj|BAH70825.1| ACYPI006176 [Acyrthosiphon pisum]
Length = 265
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%), Gaps = 4/99 (4%)
Query: 78 WQHDLFEDSLRAA---GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
W HD++E R G+S + K+ +SNL GVT+ DI+ELF E G LK +H+D+
Sbjct: 84 WTHDMYEGPKRQQMRGGLSTTNIH-KIVISNLDFGVTSTDIQELFDEFGPLKTATVHYDR 142
Query: 135 NGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
+GR G+A+VV+ ++ A A+++YNNV LDG+PMKIE+
Sbjct: 143 SGRSLGTADVVFDSKNAALKAVRQYNNVPLDGRPMKIEL 181
>gi|198424321|ref|XP_002131960.1| PREDICTED: similar to putative TCF coactivator [Ciona intestinalis]
Length = 256
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 108/190 (56%), Gaps = 17/190 (8%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +D+SLDDIIK KK++ G+GR R GRG G + G+ AR
Sbjct: 1 MADKLDLSLDDIIKINKKTKTGGGRGRGGRRGGRGGGGATGGGVGQ----ARNKRGGGRG 56
Query: 61 PSSYTIAKSFRRTRNFP---WQHDLFEDSL----RAAGISGIEVGT-----KLYVSNLHP 108
+S+ R + P W+HD++++ RA G +E + KL V+NL
Sbjct: 57 RGRGNPRQSYTRGK-MPADRWEHDMYKNGKPGRGRARGAGTMETRSTGGIGKLLVTNLDF 115
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
V++ DI ELFSE G L++ A+H+D++GR GSA+V + RRSDA ALK+YN+V LDG+
Sbjct: 116 AVSDSDITELFSEFGALRKSAVHYDRSGRSLGSADVHFERRSDAARALKQYNDVPLDGRV 175
Query: 169 MKIEVVGTNA 178
M+I V N+
Sbjct: 176 MQIRFVDGNS 185
>gi|384246743|gb|EIE20232.1| hypothetical protein COCSUDRAFT_48657 [Coccomyxa subellipsoidea
C-169]
Length = 2303
Score = 93.6 bits (231), Expect = 9e-17, Method: Composition-based stats.
Identities = 69/211 (32%), Positives = 100/211 (47%), Gaps = 38/211 (18%)
Query: 1 MATHVDMSLDDIIKS---------RKKSERERGQGRARRGRGRGRGPSGSVSGGR----- 46
MA + MSLDDII R K +GR R GR +G+ GR
Sbjct: 1 MADVLSMSLDDIINKNKSKTGGNVRAKDSDGSKRGRDERKNGRKTAKAGTRGEGRTLPID 60
Query: 47 -------MTGAARRGPLSNARPSSYTIAKSFRRTR----------NFPWQHDLFEDSLRA 89
++G ++ G R A R + N W+HDL++D +
Sbjct: 61 SLRVVVKISGVSKAGGSRIGRGQGPRKAMPTREPKAPVDPEVLDGNKKWRHDLYDDLEQG 120
Query: 90 AG-------ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSA 142
+ G G +L V+NL GVT+DDI+ELF G++K IH+D++GR +G A
Sbjct: 121 PPRRNLQHRMRGPADGFRLMVTNLADGVTDDDIKELFESCGKVKYAGIHWDRSGRSTGEA 180
Query: 143 EVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
EVVY ++DA A +++NV LDG+ M IE+
Sbjct: 181 EVVYENKADALKAKSQFDNVALDGQAMSIEL 211
>gi|158286924|ref|XP_309011.3| AGAP006733-PA [Anopheles gambiae str. PEST]
gi|157020700|gb|EAA04421.3| AGAP006733-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 105/218 (48%), Gaps = 49/218 (22%)
Query: 75 NFPWQHDLFE--------DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELK 126
N W+HD++E + G G KL VSNL GV+ DI ELF+E G L+
Sbjct: 90 NSAWKHDMYEGPRKNRLLAAAGGLGAGGPGGAAKLLVSNLDFGVSETDINELFAEFGPLR 149
Query: 127 RYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARV 186
++H+D++GR G+A+VV+ RRSDA A+K+YN V LDG+PM I++ +EIP
Sbjct: 150 SASVHYDRSGRSLGTADVVFERRSDAIKAMKQYNGVPLDGRPMSIQMA--TSEIPAP--- 204
Query: 187 NVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGR 246
R R V+ A+A R P R G GR
Sbjct: 205 -------RVPRPAVL--------AASASARSP----------RKPAG-----------GR 228
Query: 247 GGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
G GG GRG G G ++ K+A++LD ELD Y
Sbjct: 229 GAGGKSQGRGGRGGGGGGRRQPRETKTAEELDAELDAY 266
>gi|302804362|ref|XP_002983933.1| hypothetical protein SELMODRAFT_119349 [Selaginella moellendorffii]
gi|300148285|gb|EFJ14945.1| hypothetical protein SELMODRAFT_119349 [Selaginella moellendorffii]
Length = 85
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 61/82 (74%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSD 151
+ +E+G K+Y+SNL TN+D++ELFSEIGELK + +H DK G G+AEVV+ARRSD
Sbjct: 3 VIDLEIGNKIYISNLDEYATNEDLQELFSEIGELKSWRVHRDKLGNSRGTAEVVFARRSD 62
Query: 152 AFAALKRYNNVLLDGKPMKIEV 173
A A K YNNV+L K ++IE+
Sbjct: 63 AERAKKLYNNVMLGIKRLRIEI 84
>gi|256071335|ref|XP_002571996.1| RNA and export factor binding protein [Schistosoma mansoni]
gi|350645137|emb|CCD60145.1| RNA and export factor binding protein, putative [Schistosoma
mansoni]
Length = 155
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 78 WQHDLFEDSLRAAG-ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
WQHD+F+D G +S T+L++SNL GV NDDI ELF E G +++ +H+D++G
Sbjct: 55 WQHDMFQDGRSPKGSVSTGGNATRLHISNLDFGVNNDDINELFREFGAIRKATVHYDRSG 114
Query: 137 RPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
R G+AEVV+ A A YN V LDG+PM I++VG
Sbjct: 115 RSLGTAEVVFVNPLSATKAKNHYNGVPLDGRPMVIQLVG 153
>gi|313224640|emb|CBY20431.1| unnamed protein product [Oikopleura dioica]
Length = 248
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 71 RRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
RR+R+ P W HD++ KL VSNL GV+++D+RELF+E G LK+
Sbjct: 69 RRSRDLPDKWDHDMYSGGRGRGDRGARSSTAKLSVSNLDFGVSDEDMRELFAEFGALKKS 128
Query: 129 AIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
I +D++GR +G AEV + R +DA A++ YN V LDG+ M I + G N E
Sbjct: 129 QILYDRSGRSTGQAEVEFVRLADARTAMETYNQVPLDGRAMNITLSGGNQE 179
>gi|38048103|gb|AAR09954.1| similar to Drosophila melanogaster aly, partial [Drosophila yakuba]
Length = 164
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 42/190 (22%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
T+L V NL GV+N DI+ELF++ G +K+ A+H+D++GR G+A+V++ RR+DA A+K+
Sbjct: 7 TRLIVGNLDYGVSNTDIKELFNDFGPMKKAAVHYDRSGRSLGTADVIFERRADALKAIKQ 66
Query: 159 YNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAA--INR 216
Y+ V LDG+PM I++ ++ + R V T GGAA+ R
Sbjct: 67 YHGVPLDGRPMTIQLAVSDVAV--------------LTRPVAATDVKRRVGGAASAPFKR 112
Query: 217 GPGSQG--RRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSA 274
G G G R G +R G+ GQ R R K P +A
Sbjct: 113 GGGQAGGSPRRGFKRPVGGKPAAGGQRRER----------------------KAP--PTA 148
Query: 275 DDLDKELDNY 284
++LD ELD+Y
Sbjct: 149 EELDAELDSY 158
>gi|313224645|emb|CBY20436.1| unnamed protein product [Oikopleura dioica]
Length = 248
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 71 RRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
RR+R+ P W HD++ KL VSNL GV+++D+RELF+E G LK+
Sbjct: 69 RRSRDLPDKWDHDMYSGGRGGGDRGARSSTAKLSVSNLDFGVSDEDMRELFAEFGALKKS 128
Query: 129 AIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
I +D++GR +G AEV + R +DA A++ YN V LDG+ M I + G N E
Sbjct: 129 QILYDRSGRSTGQAEVEFVRLADARTAMETYNQVPLDGRAMNITLSGGNQE 179
>gi|226486950|emb|CAX75340.1| THO complex subunit 4 [Schistosoma japonicum]
Length = 213
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 81/152 (53%), Gaps = 31/152 (20%)
Query: 73 TRNFP--WQHDLFED--SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
+R+ P WQHD+F+D S + AG +G T+L++SNL GV NDDI ELF E G +++
Sbjct: 48 SRSLPDKWQHDMFQDARSPKGAGTTG-GSATRLHISNLDFGVNNDDINELFREFGAIRKA 106
Query: 129 AIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNV 188
+H+D++GR G+AEVV+ A A YN V LDG+PM I++VG AE + +R +
Sbjct: 107 TVHYDRSGRSLGTAEVVFINPLSATKAKNHYNGVPLDGRPMVIQLVGAAAEATVTSRPRI 166
Query: 189 TGVNGRRKRTVVMTSGSGNAGGAAAINRGPGS 220
T R GS
Sbjct: 167 T--------------------------RSRGS 172
>gi|359546173|pdb|3ULH|A Chain A, Crystal Structure Of A Rna Binding Domain Of Tho Complex
Subunit 4 Protein (Thoc4) From Homo Sapiens At 2.54 A
Resolution
Length = 107
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 70/107 (65%), Gaps = 4/107 (3%)
Query: 72 RTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYA 129
R + P WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+ A
Sbjct: 3 RPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAA 60
Query: 130 IHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
+H+D++GR G+A+V + R++DA A K+YN V LDG+P I++V +
Sbjct: 61 VHYDRSGRSLGTADVHFERKADALKAXKQYNGVPLDGRPXNIQLVTS 107
>gi|224098361|ref|XP_002311157.1| predicted protein [Populus trichocarpa]
gi|222850977|gb|EEE88524.1| predicted protein [Populus trichocarpa]
Length = 132
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 57/75 (76%)
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
++ +FSE+G+L R ++H+D +GR G+AEVV+A ++DA AA+KRYNNV LDGKP+KIE+V
Sbjct: 1 MQVIFSEVGDLLRCSLHYDMSGRSKGTAEVVFALQTDALAAIKRYNNVQLDGKPLKIELV 60
Query: 175 GTNAEIPLQARVNVT 189
G N P+ V T
Sbjct: 61 GDNVITPVPVLVTTT 75
>gi|303288876|ref|XP_003063726.1| RNA binding protein [Micromonas pusilla CCMP1545]
gi|226454794|gb|EEH52099.1| RNA binding protein [Micromonas pusilla CCMP1545]
Length = 280
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 64/95 (67%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHD F+ R G G +L VSNLH VTN D++ELF ++G +K+ ++FD+NGR
Sbjct: 68 WQHDRFQGGNRGPRAGGGGGGARLVVSNLHFNVTNADVKELFQQVGAVKKAGLNFDENGR 127
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
G+AE+++A + A A++ YN V LDG+P+KIE
Sbjct: 128 SKGTAEIIFASPASAQKAIQTYNGVKLDGRPLKIE 162
>gi|321472744|gb|EFX83713.1| hypothetical protein DAPPUDRAFT_301602 [Daphnia pulex]
Length = 250
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 98/188 (52%), Gaps = 24/188 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGP---SGSVSGGRMTGA-ARRGPL 56
M VDMSLDDIIK+ + + R RG R G RG SG V R A R P
Sbjct: 1 MGDKVDMSLDDIIKTNRSAGRGRGGRGGRGGSSRGGNRNAGSGPVRNQRQGNAGGRAAPY 60
Query: 57 SNARPSSYTIAKSFRRTRNFPWQHDLFE-------DSLRAAGISGIEVGTKLYVSNLHPG 109
+ P W HD++E L AA + +KL VSNL G
Sbjct: 61 AKGNPDG-------------DWSHDMYEGGPRKSNPRLGAAPNAAGGGSSKLVVSNLDFG 107
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPM 169
V++ DI+ELF E G LK ++H+D++GR G+A+VV+ RR DA A+K+YN V LDG+ M
Sbjct: 108 VSDADIKELFMEFGPLKHASVHYDRSGRSLGTADVVFERRLDAVKAMKQYNGVPLDGRSM 167
Query: 170 KIEVVGTN 177
I++ ++
Sbjct: 168 VIQMATSD 175
>gi|47194964|emb|CAF92225.1| unnamed protein product [Tetraodon nigroviridis]
Length = 104
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHD+FED A E KL VSNL GV++ D+RELF+E G LK +IH+D++GR
Sbjct: 8 WQHDMFEDHEDGAPAGEAEGSAKLLVSNLDFGVSDSDLRELFAEFGPLKEASIHYDRSGR 67
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
G+A+V + ++DA A+K+YN V LDG+
Sbjct: 68 SKGTADVHFQHKADAIKAMKQYNGVPLDGR 97
>gi|312379595|gb|EFR25817.1| hypothetical protein AND_08500 [Anopheles darlingi]
Length = 836
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 12/117 (10%)
Query: 75 NFPWQHDLFE----------DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGE 124
N W+HD++E + A TKL VSNL GV+ DI ELF+E G
Sbjct: 654 NSAWKHDMYEGARGKSSRLLTTAGIATGGLGGGITKLMVSNLDFGVSETDINELFAEFGP 713
Query: 125 LKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIP 181
LK ++H+D++GR G+A+V++ R+SDA A+K+YN V LDG+PM I++ +EIP
Sbjct: 714 LKSASVHYDRSGRSLGTADVIFERKSDAIKAMKQYNGVPLDGRPMSIQLA--TSEIP 768
>gi|7159943|emb|CAB76383.1| RNA and export factor binding protein 1-II [Mus musculus]
Length = 163
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 61/80 (76%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+Y
Sbjct: 14 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQY 73
Query: 160 NNVLLDGKPMKIEVVGTNAE 179
N V LDG+PM I++V + +
Sbjct: 74 NGVPLDGRPMNIQLVTSQID 93
>gi|159481074|ref|XP_001698607.1| RNA export factor [Chlamydomonas reinhardtii]
gi|158282347|gb|EDP08100.1| RNA export factor [Chlamydomonas reinhardtii]
Length = 137
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 78 WQHDLFEDSLRA---AGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
WQHD++ED A A ++ TKL + NLH GV+ DD+ ELFS +G +K + ++FD
Sbjct: 19 WQHDMYEDHAPAPRRAPMAQAATSTKLIIRNLHHGVSADDVLELFSTLGAVKNHGVNFDA 78
Query: 135 NGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
+GR GS VV+ R++A AA K YN V LDG+ M+I
Sbjct: 79 SGRSLGSGFVVFETRAEAVAAKKEYNGVKLDGQAMEI 115
>gi|326437919|gb|EGD83489.1| hypothetical protein PTSG_04097 [Salpingoeca sp. ATCC 50818]
Length = 281
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 91/173 (52%), Gaps = 12/173 (6%)
Query: 3 THVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPS 62
+ VDMSLD +I+ + ++ER+ RGRGRG S S R + RR +
Sbjct: 2 SKVDMSLDALIE-QDRAERQTRGRGRGGRRGRGRGRGASSSRPRTQDSRRRN-------A 53
Query: 63 SYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEI 122
YT R RN +QHD + + + KL V NL GVT DI +LF I
Sbjct: 54 PYTS----RSPRNQFYQHDSRAFAAPMSAPAPTPRSAKLLVENLDYGVTESDIEQLFGAI 109
Query: 123 GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
G+L Y+IH+D+ GR G AEV +AR DA AA++ YN LD KPMK+ VG
Sbjct: 110 GQLVDYSIHYDRAGRSLGVAEVEFARSKDAAAAVEEYNGRYLDTKPMKVSFVG 162
>gi|157819383|ref|NP_001103072.1| THO complex subunit 4 [Rattus norvegicus]
gi|149055044|gb|EDM06861.1| rCG32827, isoform CRA_a [Rattus norvegicus]
Length = 189
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 96/181 (53%), Gaps = 23/181 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARR----GPL 56
MA +DMSLDDIIK + RG GR R G G G+V AAR GP+
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGAVQA-----AARVNRGGGPM 55
Query: 57 SNARPS---------SYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSN 105
N RP+ + R + P WQHDLF+ G KL VSN
Sbjct: 56 RN-RPAIARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSN 112
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLD 165
L GV++ DI+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LD
Sbjct: 113 LDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLD 172
Query: 166 G 166
Sbjct: 173 A 173
>gi|302836664|ref|XP_002949892.1| hypothetical protein VOLCADRAFT_90392 [Volvox carteri f.
nagariensis]
gi|300264801|gb|EFJ48995.1| hypothetical protein VOLCADRAFT_90392 [Volvox carteri f.
nagariensis]
Length = 343
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Query: 78 WQHDLFEDSLRAAGISGIEVG--TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN 135
WQHD++ D + + + TKL V+NLH V+ DD+ ELFS G +K AI++D +
Sbjct: 151 WQHDMYADDYQPPRRAPVPTAPSTKLIVTNLHHQVSEDDLLELFSTCGTVKSKAINYDNS 210
Query: 136 GRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
GR GS VV+ R++A AA K Y+ V LDG+PM+I
Sbjct: 211 GRSLGSGWVVFETRAEAEAAKKEYHGVKLDGRPMEI 246
>gi|395512174|ref|XP_003760319.1| PREDICTED: LOW QUALITY PROTEIN: THO complex subunit 4-like
[Sarcophilus harrisii]
Length = 331
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 99/182 (54%), Gaps = 9/182 (4%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAAR--RGPLSN 58
MA +DMSLD+IIK S+R R G +GRG+ G SG ++ RGP+ N
Sbjct: 73 MAXEMDMSLDNIIK-LNGSQRGRCGGGQGQGRGQAGAQGGCGSGQQVAAHISRGRGPIQN 131
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLFEDS------LRAAGISGIEVGTKLYVSNLHPGVTN 112
R + A R + P+ L + S + G G+E G KL +S L GV++
Sbjct: 132 RRAMTGGGAGGGGRNQPAPYSXGLPDKSDHNMPHSGSGGGPGVETGAKLLISTLDCGVSD 191
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
DI+ELF+ G K+ A+H+D + R G+A+V + R++DA LK YN VLLDG P+ I
Sbjct: 192 ADIQELFAAFGTXKKAAVHYDPSSRSLGTADVHFERKADALKGLKHYNGVLLDGNPINIX 251
Query: 173 VV 174
++
Sbjct: 252 LL 253
>gi|359320220|ref|XP_003639282.1| PREDICTED: THO complex subunit 4-like [Canis lupus familiaris]
Length = 190
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 77 YSRPKQLPDKWQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKK 134
Query: 128 YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG 166
A+H+D++GR G+A+V + R++DA A+K+YN V LDG
Sbjct: 135 AAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG 173
>gi|328860189|gb|EGG09296.1| hypothetical protein MELLADRAFT_71269 [Melampsora larici-populina
98AG31]
Length = 218
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 119/286 (41%), Gaps = 76/286 (26%)
Query: 2 ATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP 61
A ++D LDDII ++K + R ARRG G+ +G + GR T RP
Sbjct: 3 AMNLDRPLDDIISEKRK--QRRPAAVARRG-GKANHTTGPIRHGRTT----------TRP 49
Query: 62 SSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSE 121
+A + P Q + G+K+ VSNL VT + IRELFS
Sbjct: 50 QPVAMAAPAAKILQLPAQ---------------MGQGSKIIVSNLPTDVTENQIRELFST 94
Query: 122 -IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLD-GKPMKIEVVGTNAE 179
+G + + A+ +D G+ G+A+V + R DA A ++YN L+D +PMK+E++ A
Sbjct: 95 TVGPVMKVALSYDNRGQSKGTAQVEFKRNDDATKAFQQYNKRLIDQNRPMKVEIILDPAR 154
Query: 180 IPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQG 239
IP T V K V + + AG Q RR G
Sbjct: 155 IPPPPL--STRVAPAPKPAVSVRQAAPAAG-----------QPRRTG------------- 188
Query: 240 QGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYH 285
G+ RG+ K P KSA DLD E+++Y
Sbjct: 189 -------------------GKPRGKNNKQP-PKSAADLDAEMEDYQ 214
>gi|443690305|gb|ELT92473.1| hypothetical protein CAPTEDRAFT_222506 [Capitella teleta]
Length = 242
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 62/88 (70%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
KL VSNL GV + D++ELF+E G +K+ A+H D++G G+AEV++ R +A A+K+Y
Sbjct: 92 KLLVSNLDFGVDDADVKELFAEFGRIKKAAVHHDRSGCSMGTAEVIFDSRDNAVKAIKKY 151
Query: 160 NNVLLDGKPMKIEVVGTNAEIPLQARVN 187
NNV LDG+ MKI++V A + +R++
Sbjct: 152 NNVPLDGRAMKIQMVSDGALPSVASRLS 179
>gi|259489920|ref|NP_001158978.1| RNA and export factor-binding protein 2 [Zea mays]
gi|195617784|gb|ACG30722.1| RNA and export factor-binding protein 2 [Zea mays]
Length = 136
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 88/159 (55%), Gaps = 27/159 (16%)
Query: 130 IHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVT 189
+++DK+GR G+AEVV+AR+ DA A+KRYN VLLDGKPM +E++G N E P +
Sbjct: 1 MNYDKDGRSKGTAEVVFARKVDALDAIKRYNGVLLDGKPMNLELIGNNVEPPPLPPL--- 57
Query: 190 GVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGG 249
++ R + N ++ + Q +R G RR+ Q GRG GR GG
Sbjct: 58 -IHNRPLQNY-------NDIHSSVL------QSQRNGQRRAPQVNGRG---GRSSQTSGG 100
Query: 250 GGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEA 288
G GRGR + R R P+ SA DLD ELD YHA A
Sbjct: 101 RGQGRGRVQDRNR-----TPI--SASDLDAELDKYHAAA 132
>gi|443706027|gb|ELU02304.1| hypothetical protein CAPTEDRAFT_48713, partial [Capitella teleta]
Length = 151
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 55/75 (73%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
KL VSNL GV + D++ELF+E G +K+ +H D++G G+AEV++ R +A A+K+Y
Sbjct: 2 KLLVSNLDFGVVDADVKELFAEFGRIKKAVVHHDRSGCSMGTAEVIFDSRDNAVKAIKKY 61
Query: 160 NNVLLDGKPMKIEVV 174
NNV LDG+ MKI++V
Sbjct: 62 NNVPLDGRAMKIQMV 76
>gi|156364503|ref|XP_001626387.1| predicted protein [Nematostella vectensis]
gi|156213261|gb|EDO34287.1| predicted protein [Nematostella vectensis]
Length = 169
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 85/173 (49%), Gaps = 27/173 (15%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+DMSLDDIIK KKS R RG GR G G T R P S
Sbjct: 6 LDMSLDDIIKQNKKSSRGGRGRGGSRGPGRR---GGGPVGRGRTRGNRSTPYS------- 55
Query: 65 TIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGT--------KLYVSNLHPGVTNDD 114
R R P WQHD F+ G KL +SNL GV++ D
Sbjct: 56 -------RPRELPDRWQHDKFDGRGSGGRSFSGGSGGAGGISTGSKLSISNLDFGVSDSD 108
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
I ELFSE G++KR +H+D +GR G+A+VV+ +R +A ALK+YN V LDG+
Sbjct: 109 ISELFSEFGQVKRSCVHYDASGRSHGTAKVVFVKRKNAQQALKQYNGVPLDGE 161
>gi|302754628|ref|XP_002960738.1| hypothetical protein SELMODRAFT_402061 [Selaginella moellendorffii]
gi|300171677|gb|EFJ38277.1| hypothetical protein SELMODRAFT_402061 [Selaginella moellendorffii]
Length = 395
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSD 151
+ +E+G K+Y+SNL TN+D++ELFSEIGELK + +H DK G G+AEVV+ARRSD
Sbjct: 3 VIDLEIGNKIYISNLDEYATNEDLQELFSEIGELKSWRVHRDKLGNSRGTAEVVFARRSD 62
Query: 152 AFAALKRYNN 161
A A K YNN
Sbjct: 63 AERAKKLYNN 72
>gi|297302872|ref|XP_001119635.2| PREDICTED: THO complex subunit 4-like, partial [Macaca mulatta]
Length = 87
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 61/84 (72%)
Query: 90 AGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARR 149
AG +G+E G KL VSNL GV++ DIREL +E G LK+ A+H++++GRP GSA++ + R+
Sbjct: 4 AGGAGVETGGKLLVSNLDFGVSDADIRELLAESGTLKKTAVHYNRSGRPLGSADMHFERK 63
Query: 150 SDAFAALKRYNNVLLDGKPMKIEV 173
+ A A+K+Y+ L G P+ I++
Sbjct: 64 AHALKAMKQYHGAPLAGCPVNIQL 87
>gi|397522269|ref|XP_003831197.1| PREDICTED: THO complex subunit 4 [Pan paniscus]
Length = 113
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 11 WQHDLFDSGFGGGAGVE--TGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 68
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDG 166
G+A+V + R++DA A+K+YN V LD
Sbjct: 69 SLGTADVHFERKADALKAMKQYNGVPLDA 97
>gi|326437638|gb|EGD83208.1| hypothetical protein PTSG_03838 [Salpingoeca sp. ATCC 50818]
Length = 245
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 63/136 (46%), Gaps = 42/136 (30%)
Query: 74 RNFP--WQHDLF----------------------EDSLRAAGIS------------GIEV 97
R P WQHDLF E L AA IS G+
Sbjct: 83 RTMPDKWQHDLFQGGRTQPAPRVARGAAHSSDLREMLLPAANISTTGTLAKKLGSNGLTT 142
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GTKL V+NL VT +D+RELF E G LKR + G AEVV++RR DA A
Sbjct: 143 GTKLLVTNLESSVTKEDMRELFQECGPLKRVDMP------EVGVAEVVFSRRVDAVKAQT 196
Query: 158 RYNNVLLDGKPMKIEV 173
YN V LDG+PM ++V
Sbjct: 197 TYNKVKLDGRPMYLQV 212
>gi|443690307|gb|ELT92475.1| hypothetical protein CAPTEDRAFT_40457, partial [Capitella teleta]
Length = 151
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 55/75 (73%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
KL VSNL GV + D++ELF++ G +K+ +H D++G G+AEV++ R +A A+K+Y
Sbjct: 2 KLLVSNLDFGVDDADVKELFADFGRIKKAVVHHDRSGCSMGTAEVIFDSRDNAVKAIKKY 61
Query: 160 NNVLLDGKPMKIEVV 174
NNV LDG+ MKI++V
Sbjct: 62 NNVPLDGRAMKIQMV 76
>gi|224106515|ref|XP_002314192.1| predicted protein [Populus trichocarpa]
gi|222850600|gb|EEE88147.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 48/62 (77%)
Query: 116 RELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
R F +GELKRY+IH+D++GR G+AEVV+ R ++A A+KRYN V LD KPMKIE+ G
Sbjct: 30 RPPFRNLGELKRYSIHYDRSGRSKGTAEVVFIRPAEAVVAVKRYNKVQLDEKPMKIEIAG 89
Query: 176 TN 177
TN
Sbjct: 90 TN 91
>gi|444517170|gb|ELV11398.1| THO complex subunit 4 [Tupaia chinensis]
Length = 190
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 103/238 (43%), Gaps = 61/238 (25%)
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
+ RP+ Y+ ++ R R QH L D G G L +SNLHP V++ DI+
Sbjct: 2 HPRPAPYSRSRRLRDQR----QH-LVADRGFGDGAGAQSRGQLLLLSNLHPSVSDRDIQM 56
Query: 118 LFSEIGEL-KRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
LF E G L K+ A+H+D +G G+A V + +++DA AL+ YN V LDG+P+ I++
Sbjct: 57 LFGEFGALQKQAAVHYDGSGHSLGTATVHFQQKADALKALREYNGVPLDGRPLIIQL--- 113
Query: 177 NAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGR 236
VT KR + SGN G
Sbjct: 114 -----------VTSPGDTLKRPI----SSGNGGSL------------------------- 133
Query: 237 GQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDK-----SADDLDKELDNYHAEAM 289
G+ GG RG G +G++ PV SA++LD +LD Y A A+
Sbjct: 134 -------DGKHHAGGSARGCSSWLGSRRGQQVPVHPSKQQLSAEELDAQLDAYKAAAL 184
>gi|313224644|emb|CBY20435.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 59/88 (67%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G K+ + NL GVT+DD+++LF E G +KR ++ F+ +G+ +GSAE+V+ R A A
Sbjct: 97 GCKIIIDNLDFGVTDDDMKDLFEEFGNIKRVSVLFNSHGKSTGSAEIVFRRAEFANDAQA 156
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQAR 185
+Y+ VLLDG+PM I VV ++ Q+R
Sbjct: 157 QYDGVLLDGRPMYITVVKDHSRDHFQSR 184
>gi|313224639|emb|CBY20430.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 59/88 (67%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G K+ + NL GVT+DD+++LF E G +KR ++ F+ +G+ +GSAE+V+ R A A
Sbjct: 97 GCKIIIDNLDFGVTDDDMKDLFEEFGNIKRVSVLFNSHGKSTGSAEIVFRRAEFANDAQA 156
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQAR 185
+Y+ VLLDG+PM I VV ++ Q+R
Sbjct: 157 QYDGVLLDGRPMYITVVKDHSRDHFQSR 184
>gi|301091123|ref|XP_002895753.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096665|gb|EEY54717.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 207
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GTK+ V NL + +++RELF +GE+ + I +D++GR G A V +ARRSDA A+K
Sbjct: 51 GTKILVKNLKFDILEEEVRELFGTVGEVSKTEIVYDRSGRSKGIARVWFARRSDADKAIK 110
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRG 217
+Y+ LDG+PM+I + + R + G +R V S G N
Sbjct: 111 QYDGRTLDGQPMQIAL-----DSDKNVRNGLFGTALQRDDKDVKFKVSFGEG-----NDN 160
Query: 218 PGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDL 277
S+GRR R RG RG G+GK++ K+A+DL
Sbjct: 161 EQSKGRRNKRRV------------------------RGNDRGSQGGRGKESAPSKTAEDL 196
Query: 278 DKELDNYHAEA 288
D E+D Y +A
Sbjct: 197 DNEMDTYMKDA 207
>gi|66809087|ref|XP_638266.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466704|gb|EAL64755.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 327
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 53/75 (70%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
G++L +SNLH ++ D++ LF +GE+K+ IH+D +GR G+ V+Y+R +DA AAL
Sbjct: 239 TGSRLNISNLHHAISEADLKVLFDSLGEIKQIKIHYDHSGRSDGTGYVIYSRHNDAMAAL 298
Query: 157 KRYNNVLLDGKPMKI 171
K+YN LDG+ +KI
Sbjct: 299 KKYNGAQLDGRTLKI 313
>gi|315049755|ref|XP_003174252.1| RNA binding domain-containing protein [Arthroderma gypseum CBS
118893]
gi|311342219|gb|EFR01422.1| RNA binding domain-containing protein [Arthroderma gypseum CBS
118893]
Length = 328
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 85/190 (44%), Gaps = 40/190 (21%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II R S R RG GRMTG RR N R S+
Sbjct: 1 MDQSLDEIISERPNSSRPRG--------------------GRMTGPRRR---PNFR-DSH 36
Query: 65 TIAKSFRRTRNFPWQHDLFEDS----------------LRAAGISGIEVGTKLYVSNLHP 108
++ R + W HD FED + G K+ VSN+H
Sbjct: 37 KPSRGDRADLDLDWVHDRFEDDRDTRSSRPPRQPRTDRYNSGPADQDSRGAKIRVSNIHY 96
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
+T +D+ ELF+ IG + A+ +D+ GR G+A V Y R SDA A+ ++ G+P
Sbjct: 97 DLTQEDLEELFTRIGPVHSVALLYDRAGRSEGTAFVTYKRLSDAETAIHEFDGANAKGQP 156
Query: 169 MKIEVVGTNA 178
+++ +V +A
Sbjct: 157 IRLNLVTNSA 166
>gi|403160007|ref|XP_003320572.2| hypothetical protein PGTG_02594 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169372|gb|EFP76153.2| hypothetical protein PGTG_02594 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 221
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 92/182 (50%), Gaps = 31/182 (17%)
Query: 2 ATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP 61
A ++D LDDII ++K + G G ARRG GR G +G V GR A R P+
Sbjct: 4 AMNLDRPLDDIISDKRKQHKRPG-GIARRG-GRTNG-TGPVRNGR---APRAQPVV---- 53
Query: 62 SSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF-S 120
+ + AKS + P Q + G+K+ VSNL VT + IRELF +
Sbjct: 54 APVSTAKSLQ----LPPQ---------------MGQGSKIIVSNLPSDVTENQIRELFNT 94
Query: 121 EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLD-GKPMKIEVVGTNAE 179
+G + R + +D G G A+V + R DA A ++YN L+D +PMK+E+V +
Sbjct: 95 TVGHVTRVTLSYDNRGASKGIAQVEFKRNEDATKAFQQYNKRLIDQNRPMKVEIVVDPSR 154
Query: 180 IP 181
IP
Sbjct: 155 IP 156
>gi|355712626|gb|AES04411.1| polymerase , delta interacting protein 3 [Mustela putorius furo]
Length = 438
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 291 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 342
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA AA K+YNN LDG+PMK +
Sbjct: 343 DAVAAYKKYNNRCLDGQPMKCNL 365
>gi|444723779|gb|ELW64409.1| Polymerase delta-interacting protein 3 [Tupaia chinensis]
Length = 395
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 248 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 299
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA AA K+YNN LDG+PMK +
Sbjct: 300 DAIAAYKKYNNRCLDGQPMKCNL 322
>gi|60359854|dbj|BAD90146.1| mKIAA1649 protein [Mus musculus]
Length = 453
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 307 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 358
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 359 DAITAYKKYNNRCLDGQPMKCNL 381
>gi|281344756|gb|EFB20340.1| hypothetical protein PANDA_016426 [Ailuropoda melanoleuca]
Length = 401
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 254 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 305
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 306 DAITAYKKYNNRCLDGQPMKCNL 328
>gi|440900830|gb|ELR51877.1| Polymerase delta-interacting protein 3, partial [Bos grunniens
mutus]
Length = 430
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 283 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 334
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 335 DAITAYKKYNNRCLDGQPMKCNL 357
>gi|348569624|ref|XP_003470598.1| PREDICTED: polymerase delta-interacting protein 3-like isoform 1
[Cavia porcellus]
Length = 417
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 270 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 321
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 322 DAITAYKKYNNRCLDGQPMKCNL 344
>gi|426225859|ref|XP_004007077.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1 [Ovis
aries]
Length = 421
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|301782633|ref|XP_002926728.1| PREDICTED: polymerase delta-interacting protein 3-like [Ailuropoda
melanoleuca]
Length = 421
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|119593672|gb|EAW73266.1| polymerase (DNA-directed), delta interacting protein 3, isoform
CRA_c [Homo sapiens]
Length = 482
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 335 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 386
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 387 DAITAYKKYNNRCLDGQPMKCNL 409
>gi|157073881|ref|NP_001096653.1| polymerase delta-interacting protein 3 [Bos taurus]
gi|157279209|gb|AAI34442.1| Polymerase (DNA-directed), delta interacting protein 3 [Bos taurus]
gi|296486959|tpg|DAA29072.1| TPA: polymerase (DNA-directed), delta interacting protein 3 [Bos
taurus]
Length = 421
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|414884082|tpg|DAA60096.1| TPA: hypothetical protein ZEAMMB73_204647 [Zea mays]
gi|414884083|tpg|DAA60097.1| TPA: hypothetical protein ZEAMMB73_204647 [Zea mays]
Length = 136
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 130 IHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVT 189
+++DK+GR G+ EVV+AR+ DA A+KRYN VLLDGKPM +E++G N E P V
Sbjct: 1 MNYDKDGRSKGTVEVVFARKVDALDAIKRYNGVLLDGKPMNLELIGNNVEPPPMPPV--- 57
Query: 190 GVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGG 249
++ R + S Q +RGG RR QG GRG + G G
Sbjct: 58 -IHSRPLQNYNDIHSS-------------MPQSQRGGQRRVPQGNGRGGRSSQSSGGRGQ 103
Query: 250 GGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
G G +N SA DLD ELD YHA A++
Sbjct: 104 GKG----------RGQDRNRTTISAADLDAELDKYHAAAVK 134
>gi|426225861|ref|XP_004007078.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2 [Ovis
aries]
Length = 392
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 296
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 297 DAITAYKKYNNRCLDGQPMKCNL 319
>gi|119593670|gb|EAW73264.1| polymerase (DNA-directed), delta interacting protein 3, isoform
CRA_a [Homo sapiens]
Length = 453
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 306 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 357
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 358 DAITAYKKYNNRCLDGQPMKCNL 380
>gi|410965747|ref|XP_003989403.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1 [Felis
catus]
Length = 421
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|348569626|ref|XP_003470599.1| PREDICTED: polymerase delta-interacting protein 3-like isoform 2
[Cavia porcellus]
Length = 388
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 241 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 292
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 293 DAITAYKKYNNRCLDGQPMKCNL 315
>gi|395327407|gb|EJF59807.1| hypothetical protein DICSQDRAFT_88921 [Dichomitus squalens LYAD-421
SS1]
Length = 217
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 81/172 (47%), Gaps = 34/172 (19%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II +R K R + R G+ + G S R AR P SN
Sbjct: 1 MDKSLDEIIATRPKGIR-KSNPRRNSGKAQVLGNSNPAPATR----ARAVPASNG----- 50
Query: 65 TIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS-EIG 123
AK+ T + P K+ VSNL P V ++ELF+ +G
Sbjct: 51 --AKTVPPTASQP--------------------ADKIIVSNLPPDVNEAQVKELFTATVG 88
Query: 124 ELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK-PMKIEVV 174
LK +H+D GR G A V ++RR D A ++YNN L+DGK PMKIE+V
Sbjct: 89 PLKDVTLHYDSQGRSKGVAAVHFSRRGDGTKAFQQYNNRLIDGKRPMKIEIV 140
>gi|33876281|gb|AAH01488.2| POLDIP3 protein, partial [Homo sapiens]
Length = 417
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 270 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 321
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 322 DAITAYKKYNNRCLDGQPMKCNL 344
>gi|431900012|gb|ELK07947.1| Polymerase delta-interacting protein 3 [Pteropus alecto]
Length = 440
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 293 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 344
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 345 DAITAYKKYNNRCLDGQPMKCNL 367
>gi|34327982|dbj|BAB33368.2| KIAA1649 protein [Homo sapiens]
Length = 424
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 277 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 328
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 329 DAITAYKKYNNRCLDGQPMKCNL 351
>gi|402884438|ref|XP_003905689.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1 [Papio
anubis]
Length = 421
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|390458881|ref|XP_002743862.2| PREDICTED: polymerase delta-interacting protein 3 isoform 1
[Callithrix jacchus]
Length = 421
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|355563731|gb|EHH20293.1| hypothetical protein EGK_03115 [Macaca mulatta]
Length = 391
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 244 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 295
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 296 DAITAYKKYNNRCLDGQPMKCNL 318
>gi|74195617|dbj|BAE39617.1| unnamed protein product [Mus musculus]
Length = 429
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 283 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 334
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 335 DAITAYKKYNNRCLDGQPMKCNL 357
>gi|403282846|ref|XP_003932849.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1
[Saimiri boliviensis boliviensis]
Length = 421
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|344296314|ref|XP_003419854.1| PREDICTED: polymerase delta-interacting protein 3 [Loxodonta
africana]
Length = 420
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 273 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 324
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 325 DAITAYKKYNNRCLDGQPMKCNL 347
>gi|29837655|ref|NP_115687.2| polymerase delta-interacting protein 3 isoform 1 [Homo sapiens]
gi|50403796|sp|Q9BY77.2|PDIP3_HUMAN RecName: Full=Polymerase delta-interacting protein 3; AltName:
Full=46 kDa DNA polymerase delta interaction protein;
Short=p46; AltName: Full=S6K1 Aly/REF-like target;
Short=SKAR
gi|7228284|emb|CAB77058.1| hypothetical protein [Homo sapiens]
gi|37595436|gb|AAQ94604.1| RNA-binding protein P46 [Homo sapiens]
gi|47678443|emb|CAG30342.1| dJ222E13.3 [Homo sapiens]
gi|55777399|gb|AAH49840.1| Polymerase (DNA-directed), delta interacting protein 3 [Homo
sapiens]
gi|63102441|gb|AAH95411.1| Polymerase (DNA-directed), delta interacting protein 3 [Homo
sapiens]
gi|109451152|emb|CAK54437.1| POLDIP3 [synthetic construct]
gi|109451730|emb|CAK54736.1| POLDIP3 [synthetic construct]
gi|158256980|dbj|BAF84463.1| unnamed protein product [Homo sapiens]
gi|168278937|dbj|BAG11348.1| polymerase delta-interacting protein 3 [synthetic construct]
Length = 421
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|390458883|ref|XP_003732195.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2
[Callithrix jacchus]
Length = 392
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 296
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 297 DAITAYKKYNNRCLDGQPMKCNL 319
>gi|149743380|ref|XP_001500767.1| PREDICTED: polymerase delta-interacting protein 3 [Equus caballus]
Length = 443
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 296 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 347
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 348 DAITAYKKYNNRCLDGQPMKCNL 370
>gi|345776778|ref|XP_531709.3| PREDICTED: polymerase delta-interacting protein 3 isoform 2 [Canis
lupus familiaris]
Length = 421
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|332859957|ref|XP_515172.3| PREDICTED: uncharacterized protein LOC458882 [Pan troglodytes]
gi|397467008|ref|XP_003805226.1| PREDICTED: polymerase delta-interacting protein 3 [Pan paniscus]
gi|410216672|gb|JAA05555.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
gi|410267538|gb|JAA21735.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
gi|410354107|gb|JAA43657.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
Length = 421
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|300116246|ref|NP_001177830.1| polymerase delta-interacting protein 3 [Macaca mulatta]
gi|380786117|gb|AFE64934.1| polymerase delta-interacting protein 3 isoform 1 [Macaca mulatta]
gi|383410749|gb|AFH28588.1| polymerase delta-interacting protein 3 isoform 1 [Macaca mulatta]
gi|384942508|gb|AFI34859.1| polymerase delta-interacting protein 3 isoform 1 [Macaca mulatta]
Length = 421
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|410965749|ref|XP_003989404.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2 [Felis
catus]
Length = 392
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 296
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 297 DAITAYKKYNNRCLDGQPMKCNL 319
>gi|395819634|ref|XP_003783187.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1
[Otolemur garnettii]
Length = 421
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|30519969|ref|NP_848742.1| polymerase delta-interacting protein 3 [Mus musculus]
gi|50401030|sp|Q8BG81.1|PDIP3_MOUSE RecName: Full=Polymerase delta-interacting protein 3; AltName:
Full=S6K1 Aly/REF-like target; Short=SKAR
gi|26349009|dbj|BAC38144.1| unnamed protein product [Mus musculus]
gi|26350863|dbj|BAC39068.1| unnamed protein product [Mus musculus]
gi|26352494|dbj|BAC39877.1| unnamed protein product [Mus musculus]
gi|55249578|gb|AAH46505.2| Polymerase (DNA-directed), delta interacting protein 3 [Mus
musculus]
gi|56079151|gb|AAH58225.2| Polymerase (DNA-directed), delta interacting protein 3 [Mus
musculus]
gi|77045764|gb|AAH37652.2| Polymerase (DNA-directed), delta interacting protein 3 [Mus
musculus]
Length = 420
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|148672533|gb|EDL04480.1| polymerase (DNA-directed), delta interacting protein 3, isoform
CRA_a [Mus musculus]
Length = 420
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|194473638|ref|NP_001123978.1| polymerase delta-interacting protein 3 [Rattus norvegicus]
gi|149065765|gb|EDM15638.1| polymerase (DNA-directed), delta interacting protein 3 (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 420
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|74209870|dbj|BAE30916.1| unnamed protein product [Mus musculus]
Length = 420
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|402884440|ref|XP_003905690.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2 [Papio
anubis]
Length = 392
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 296
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 297 DAITAYKKYNNRCLDGQPMKCNL 319
>gi|345311215|ref|XP_001508801.2| PREDICTED: polymerase delta-interacting protein 3-like, partial
[Ornithorhynchus anatinus]
Length = 394
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRSDAFAAL 156
GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++ DA A
Sbjct: 253 GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKEDAITAY 305
Query: 157 KRYNNVLLDGKPMKIEV 173
K+YNN LDG+PMK +
Sbjct: 306 KKYNNRCLDGQPMKCNL 322
>gi|149065766|gb|EDM15639.1| polymerase (DNA-directed), delta interacting protein 3 (predicted),
isoform CRA_b [Rattus norvegicus]
Length = 391
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 296
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 297 DAITAYKKYNNRCLDGQPMKCNL 319
>gi|148672534|gb|EDL04481.1| polymerase (DNA-directed), delta interacting protein 3, isoform
CRA_b [Mus musculus]
Length = 391
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 296
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 297 DAITAYKKYNNRCLDGQPMKCNL 319
>gi|417400646|gb|JAA47252.1| Putative rrm motif-containing protein [Desmodus rotundus]
Length = 421
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|383410751|gb|AFH28589.1| polymerase delta-interacting protein 3 isoform 2 [Macaca mulatta]
Length = 392
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 296
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 297 DAITAYKKYNNRCLDGQPMKCNL 319
>gi|345776780|ref|XP_003431530.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1 [Canis
lupus familiaris]
Length = 392
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 296
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 297 DAITAYKKYNNRCLDGQPMKCNL 319
>gi|30089919|ref|NP_835237.1| polymerase delta-interacting protein 3 isoform 2 [Homo sapiens]
gi|7228286|emb|CAB77059.1| hypothetical protein [Homo sapiens]
gi|56079007|gb|AAH56912.2| Polymerase (DNA-directed), delta interacting protein 3 [Homo
sapiens]
gi|158256678|dbj|BAF84312.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 296
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 297 DAITAYKKYNNRCLDGQPMKCNL 319
>gi|403282848|ref|XP_003932850.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2
[Saimiri boliviensis boliviensis]
Length = 392
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 296
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 297 DAITAYKKYNNRCLDGQPMKCNL 319
>gi|332859959|ref|XP_003317328.1| PREDICTED: uncharacterized protein LOC458882 [Pan troglodytes]
gi|397467010|ref|XP_003805227.1| PREDICTED: polymerase delta-interacting protein 3 [Pan paniscus]
gi|410216670|gb|JAA05554.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
gi|410267536|gb|JAA21734.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
gi|410354105|gb|JAA43656.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
Length = 392
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 296
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 297 DAITAYKKYNNRCLDGQPMKCNL 319
>gi|74213780|dbj|BAE29328.1| unnamed protein product [Mus musculus]
Length = 391
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 296
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 297 DAITAYKKYNNRCLDGQPMKCNL 319
>gi|395753496|ref|XP_002831266.2| PREDICTED: polymerase delta-interacting protein 3 [Pongo abelii]
Length = 438
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 291 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 342
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 343 DAITAYKKYNNRCLDGQPMKCNL 365
>gi|332231394|ref|XP_003264881.1| PREDICTED: uncharacterized protein LOC100580935 isoform 1 [Nomascus
leucogenys]
Length = 421
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 325
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 326 DAITAYKKYNNRCLDGQPMKCNL 348
>gi|332859961|ref|XP_003317329.1| PREDICTED: uncharacterized protein LOC458882 [Pan troglodytes]
gi|397467012|ref|XP_003805228.1| PREDICTED: polymerase delta-interacting protein 3 [Pan paniscus]
Length = 438
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 291 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 342
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 343 DAITAYKKYNNRCLDGQPMKCNL 365
>gi|194382604|dbj|BAG64472.1| unnamed protein product [Homo sapiens]
Length = 438
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 291 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 342
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 343 DAITAYKKYNNRCLDGQPMKCNL 365
>gi|395819636|ref|XP_003783188.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2
[Otolemur garnettii]
Length = 392
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 296
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 297 DAITAYKKYNNRCLDGQPMKCNL 319
>gi|332231396|ref|XP_003264882.1| PREDICTED: uncharacterized protein LOC100580935 isoform 2 [Nomascus
leucogenys]
Length = 392
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 296
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 297 DAITAYKKYNNRCLDGQPMKCNL 319
>gi|332231398|ref|XP_003264883.1| PREDICTED: uncharacterized protein LOC100580935 isoform 3 [Nomascus
leucogenys]
Length = 438
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 291 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 342
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 343 DAITAYKKYNNRCLDGQPMKCNL 365
>gi|126339059|ref|XP_001370917.1| PREDICTED: polymerase delta-interacting protein 3-like [Monodelphis
domestica]
Length = 411
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRSDAFAAL 156
GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++ DA A
Sbjct: 270 GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKEDAITAY 322
Query: 157 KRYNNVLLDGKPMKIEV 173
K+YNN LDG+PMK +
Sbjct: 323 KKYNNRCLDGQPMKCNL 339
>gi|449276143|gb|EMC84806.1| Polymerase delta-interacting protein 3 [Columba livia]
Length = 404
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARR 149
S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 257 AFSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKK 308
Query: 150 SDAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 309 EDAITAYKKYNNRCLDGQPMKCNL 332
>gi|344254561|gb|EGW10665.1| Polymerase delta-interacting protein 3 [Cricetulus griseus]
Length = 373
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 226 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 277
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 278 DAVTAYKKYNNRCLDGQPMKCNL 300
>gi|351708364|gb|EHB11283.1| Polymerase delta-interacting protein 3 [Heterocephalus glaber]
Length = 296
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 149 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 200
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 201 DAITAYKKYNNRCLDGQPMKCNL 223
>gi|326469195|gb|EGD93204.1| RNA binding domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 327
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II R S R RG GRM G+ RR +N R S+
Sbjct: 1 MDQSLDEIIAERPDSSRPRG--------------------GRMAGSRRR---TNFR-GSH 36
Query: 65 TIAKSFRRTRNFPWQHDLFEDS----------------LRAAGISGIEVGTKLYVSNLHP 108
++ R + W HD FED + G K+ VSN+H
Sbjct: 37 KPSRGDRADLDLDWVHDRFEDDRDSRSSRPPRQPRTDRYNSGPADQDSRGAKIRVSNIHY 96
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
+T +D+ ELF+ IG + ++ +D+ GR G+A V Y R SDA A+ ++ G+P
Sbjct: 97 DLTQEDLEELFTRIGPVYSVSLLYDRAGRSEGTAFVTYKRLSDAETAIHEFDGANAKGQP 156
Query: 169 MKIEVVGTNA 178
+++ +V ++A
Sbjct: 157 IRLTLVPSSA 166
>gi|61097949|ref|NP_001012832.1| polymerase delta-interacting protein 3 [Gallus gallus]
gi|60098375|emb|CAH65018.1| hypothetical protein RCJMB04_1d4 [Gallus gallus]
Length = 418
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARR 149
S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 271 AFSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKK 322
Query: 150 SDAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 323 EDAITAYKKYNNRCLDGQPMKCNL 346
>gi|327287218|ref|XP_003228326.1| PREDICTED: polymerase delta-interacting protein 3-like isoform 1
[Anolis carolinensis]
Length = 418
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRSDAFAAL 156
GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++ DA A
Sbjct: 278 GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGMAEVVFVKKEDAITAY 330
Query: 157 KRYNNVLLDGKPMKIEV 173
K+YNN LDG+PMK +
Sbjct: 331 KKYNNRCLDGQPMKCNL 347
>gi|449481723|ref|XP_002196467.2| PREDICTED: polymerase delta-interacting protein 3 [Taeniopygia
guttata]
Length = 416
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARR 149
S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 269 AFSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKK 320
Query: 150 SDAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 321 EDAITAYKKYNNRCLDGQPMKCNL 344
>gi|327287220|ref|XP_003228327.1| PREDICTED: polymerase delta-interacting protein 3-like isoform 2
[Anolis carolinensis]
Length = 392
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRSDAFAAL 156
GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++ DA A
Sbjct: 252 GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGMAEVVFVKKEDAITAY 304
Query: 157 KRYNNVLLDGKPMKIEV 173
K+YNN LDG+PMK +
Sbjct: 305 KKYNNRCLDGQPMKCNL 321
>gi|326912076|ref|XP_003202380.1| PREDICTED: polymerase delta-interacting protein 3-like [Meleagris
gallopavo]
Length = 429
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARR 149
S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 282 AFSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKK 333
Query: 150 SDAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 334 EDAITAYKKYNNRCLDGQPMKCNL 357
>gi|354493449|ref|XP_003508854.1| PREDICTED: polymerase delta-interacting protein 3 [Cricetulus
griseus]
Length = 438
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 291 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 342
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 343 DAVTAYKKYNNRCLDGQPMKCNL 365
>gi|325187566|emb|CCA22104.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 247
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GTK++V NL + DD+RELF +G++ + I +D++GR G A V + RRSDA A+K
Sbjct: 129 GTKIFVKNLKFDILEDDVRELFGTVGQVTKAEIVYDRSGRSKGVARVWFGRRSDAEKAIK 188
Query: 158 RYNNVLLDGKPMKIEV 173
+Y+ LDG+PM+I +
Sbjct: 189 QYDGRTLDGQPMQIAL 204
>gi|193591791|ref|XP_001951805.1| PREDICTED: hypothetical protein LOC100164360 [Acyrthosiphon pisum]
Length = 443
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 6/78 (7%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+G K+ +SNL P VT +DIRELF++IG+L + RP G AEV+Y RR+DA A+
Sbjct: 324 IGHKIIISNLEPSVTCEDIRELFADIGDLLESKV-----IRP-GVAEVIYNRRADAIQAV 377
Query: 157 KRYNNVLLDGKPMKIEVV 174
Y+N LDG+PMK ++V
Sbjct: 378 DVYHNRQLDGRPMKCDMV 395
>gi|114432134|gb|ABI74675.1| POLDIP3 [Homo sapiens]
Length = 163
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 16 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 67
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
DA A K+YNN LDG+PMK +
Sbjct: 68 DAITAYKKYNNRCLDGQPMKCNL 90
>gi|395541317|ref|XP_003772591.1| PREDICTED: polymerase delta-interacting protein 3 [Sarcophilus
harrisii]
Length = 418
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRSDAFAAL 156
GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++ DA A
Sbjct: 277 GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKEDAITAY 329
Query: 157 KRYNNVLLDGKPMKIEV 173
K+YNN LDG+PMK +
Sbjct: 330 KKYNNRCLDGQPMKCNL 346
>gi|393243627|gb|EJD51141.1| hypothetical protein AURDEDRAFT_111799 [Auricularia delicata
TFB-10046 SS5]
Length = 257
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 90/176 (51%), Gaps = 25/176 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M++ +D SLDD+I +K R R RRGR RG +G+ G + GA R S
Sbjct: 1 MSSALDKSLDDMIVDKK---RNRA---PRRGRST-RGSTGTT--GAVAGATARTRYSGIL 51
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
PSS N + + +G E K+ VSNL P V I+ELFS
Sbjct: 52 PSS-----------NGNIAAKQAAAAAQVQSSAGAE---KIIVSNLPPDVNEAQIKELFS 97
Query: 121 E-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK-PMKIEVV 174
+G LK +HFD++G+ G A V ++R+ D A +YN+ L+DGK PMKIE++
Sbjct: 98 TTVGPLKEVNLHFDQHGKSKGVAHVQFSRKGDGTKAYNQYNHRLIDGKRPMKIEII 153
>gi|432119105|gb|ELK38325.1| THO complex subunit 4 [Myotis davidii]
Length = 153
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 53/72 (73%), Gaps = 3/72 (4%)
Query: 116 RELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
RELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V
Sbjct: 21 RELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 80
Query: 176 TNAEI---PLQA 184
+ + P+Q+
Sbjct: 81 SQIDTQRRPVQS 92
>gi|326479299|gb|EGE03309.1| RNA binding domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 297
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II R S R RG GRM G+ RR +N R S+
Sbjct: 1 MDQSLDEIIAERPDSSRPRG--------------------GRMAGSRRR---TNFR-GSH 36
Query: 65 TIAKSFRRTRNFPWQHDLFEDS----------------LRAAGISGIEVGTKLYVSNLHP 108
++ R + W HD FED + G K+ VSN+H
Sbjct: 37 KPSRGDRADLDLDWVHDRFEDDRDSRSSRPPRQPRTDRYNSGPADQDSRGAKIRVSNIHY 96
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
+T +D+ ELF+ IG + ++ +D+ GR G+A V Y R SDA A+ ++ G+P
Sbjct: 97 DLTQEDLEELFTRIGPVYSVSLLYDRAGRSEGTAFVTYKRLSDAETAIHEFDGANAKGQP 156
Query: 169 MKIEVVGTNA 178
+++ +V ++A
Sbjct: 157 IRLTLVPSSA 166
>gi|148237123|ref|NP_001085615.1| polymerase (DNA-directed), delta interacting protein 3 [Xenopus
laevis]
gi|49115681|gb|AAH73024.1| MGC82630 protein [Xenopus laevis]
Length = 405
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSD 151
+S +E GTK+ V+NLHP VT +DI ELF G LKR + G AEVV+ R+ D
Sbjct: 256 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLLS------PGEAEVVFVRKDD 308
Query: 152 AFAALKRYNNVLLDGKPMKIEV 173
A A K+YNN LDG+PMK +
Sbjct: 309 AVGAYKKYNNRYLDGQPMKCNL 330
>gi|47217029|emb|CAG01657.1| unnamed protein product [Tetraodon nigroviridis]
Length = 466
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GTK+ V+NLHP VT +DI ELF G LKR + G AEVV+ R+ DA +A +
Sbjct: 312 GTKITVNNLHPRVTEEDIVELFCVCGALKRARLVR------VGVAEVVFVRKEDAVSAYR 365
Query: 158 RYNNVLLDGKPMKIEV 173
+YNN LDG+PMK +
Sbjct: 366 KYNNRCLDGQPMKCNL 381
>gi|89267426|emb|CAJ83463.1| polymerase (DNA-directed), delta interacting protein 3 [Xenopus
(Silurana) tropicalis]
Length = 433
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GTK+ V+NLHP VT +DI ELF G LKR + G+AEVV+ R+ DA A K
Sbjct: 288 GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLL------SPGAAEVVFVRKDDAVGAYK 341
Query: 158 RYNNVLLDGKPMKIEV 173
+YNN LDG+PMK +
Sbjct: 342 KYNNRYLDGQPMKCNL 357
>gi|348511422|ref|XP_003443243.1| PREDICTED: polymerase delta-interacting protein 3-like [Oreochromis
niloticus]
Length = 479
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GTK+ V+NLHP VT +DI ELF G LKR + G AEVV+ R+ DA +A +
Sbjct: 323 GTKITVNNLHPRVTEEDIVELFCVCGALKRARLV------KVGVAEVVFVRKEDAVSAYR 376
Query: 158 RYNNVLLDGKPMKIEV 173
+YNN LDG+PMK +
Sbjct: 377 KYNNRCLDGQPMKCNL 392
>gi|224587390|gb|ACN58656.1| Polymerase delta-interacting protein 3 [Salmo salar]
Length = 478
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 10/103 (9%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GTK+ V+NLHP VT +DI ELF G LKR + G AEVV+ R+ DA +A +
Sbjct: 326 GTKITVNNLHPRVTEEDIVELFCVCGALKRARLV------KVGIAEVVFVRKEDAVSAYR 379
Query: 158 RYNNVLLDGKPMKIEVV----GTNAEIPLQARVNVTGVNGRRK 196
+YNN LDG+PMK + ++ P+ R++ T +GR++
Sbjct: 380 KYNNRCLDGQPMKCNLYIQGNVITSDQPILLRLSDTPGSGRKE 422
>gi|432871062|ref|XP_004071852.1| PREDICTED: polymerase delta-interacting protein 3-like [Oryzias
latipes]
Length = 480
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GTK+ V+NLHP VT +DI ELF G LKR + G AEVV+ R+ DA +A +
Sbjct: 324 GTKITVNNLHPRVTEEDIVELFCVCGALKRARLV------KVGVAEVVFVRKEDAVSAYR 377
Query: 158 RYNNVLLDGKPMKIEV 173
+YNN LDG+PMK +
Sbjct: 378 KYNNRCLDGQPMKCNL 393
>gi|328874187|gb|EGG22553.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 348
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
G ++ VSNL+ VT +D+ ++F +GE+K I+FD++GR G+A +VY+ R+ A A+
Sbjct: 271 TGARVNVSNLNYDVTQEDLIQIFQRVGEVKSLNINFDRSGRSDGTATIVYSHRNSADEAV 330
Query: 157 KRYNNVLLDGKPMKIEV 173
+ Y N LLDGKPM + +
Sbjct: 331 RTYQNALLDGKPMIVHL 347
>gi|53749688|ref|NP_001005439.1| polymerase (DNA-directed), delta interacting protein 3 [Xenopus
(Silurana) tropicalis]
gi|49250533|gb|AAH74542.1| polymerase (DNA-directed), delta interacting protein 3 [Xenopus
(Silurana) tropicalis]
Length = 367
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GTK+ V+NLHP VT +DI ELF G LKR + G+AEVV+ R+ DA A K
Sbjct: 222 GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLLS------PGAAEVVFVRKDDAVGAYK 275
Query: 158 RYNNVLLDGKPMKIEV 173
+YNN LDG+PMK +
Sbjct: 276 KYNNRYLDGQPMKCNL 291
>gi|147902093|ref|NP_001089369.1| uncharacterized protein LOC734419 [Xenopus laevis]
gi|62471556|gb|AAH93543.1| MGC114944 protein [Xenopus laevis]
Length = 395
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSD 151
+S +E GTK+ V NLHP VT +DI ELF G LKR + G AEVV+ R+ D
Sbjct: 282 LSPLE-GTKMTVKNLHPRVTEEDIVELFCVCGALKRARL------LSPGVAEVVFVRKDD 334
Query: 152 AFAALKRYNNVLLDGKPMKIEV 173
A A K+YNN LDG+PMK +
Sbjct: 335 AVGAYKKYNNRYLDGQPMKCNL 356
>gi|336375402|gb|EGO03738.1| hypothetical protein SERLA73DRAFT_175356 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388461|gb|EGO29605.1| hypothetical protein SERLADRAFT_457577 [Serpula lacrymans var.
lacrymans S7.9]
Length = 240
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 68 KSFRRTRNF--PWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
K + R RN PW HD S AA I TKL VSNLH +T D+ +F +IG L
Sbjct: 11 KPYSRPRNSDGPWLHDRAPLSSLAAAIP-TSANTKLVVSNLHYEITPKDLVSIFGQIGTL 69
Query: 126 KRYA-IHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQA 184
R I +D++GR SG A V + ++A A K+++ + G+ M+I
Sbjct: 70 VREPLIRYDRSGRSSGVAYVSFETSTEAIRAKKQFHGMAAKGQSMEIAF----------- 118
Query: 185 RVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGR--RGGLRRSSQGRGRGQGQGR 242
T RR R+V M GS + I R P R GG ++ G G + R
Sbjct: 119 ---DTAAPPRRPRSVSM-PGSKTSSLLNRIER-PSLAERLGSGGEKQQQGGFSLGPIRTR 173
Query: 243 GRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
R R + + + + P K+A++LD+ELD +
Sbjct: 174 ARARPSAPKASAPKVAPAAKTKARTKP--KTAEELDQELDAF 213
>gi|449511408|ref|XP_002197072.2| PREDICTED: polymerase delta-interacting protein 3-like, partial
[Taeniopygia guttata]
Length = 149
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 9/81 (11%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARR 149
S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 2 AFSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKK 53
Query: 150 SDAFAALKRYNNVLLDGKPMK 170
DA A K+YNN LDG+PMK
Sbjct: 54 EDAITAYKKYNNRCLDGQPMK 74
>gi|303320077|ref|XP_003070038.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109724|gb|EER27893.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 316
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 127/311 (40%), Gaps = 64/311 (20%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II R + + RGR R A RRG S +
Sbjct: 1 MDRSLDEIIAERPRY--------SNRGRTR-------------QSAGRRGNFSRDEARVH 39
Query: 65 TIAKSFRRTRNFPWQHDLFEDS--LRAAGISGIEV---------------GTKLYVSNLH 107
++ R W HD FED R A G G KL V+NLH
Sbjct: 40 KFFRNDRADVELDWVHDKFEDDRDTRPASFRGPRARRDGRLSPPPEQSSSGAKLRVNNLH 99
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
+T +D+R LF+ IG + ++ +D+ GR G A V Y R DA A++ ++ G+
Sbjct: 100 YDITEEDLRGLFTGIGPILSLSLVYDRAGRSEGVAFVTYKRLVDAQTAIREFDGANAKGQ 159
Query: 168 PMKIEVVGTNAEIPLQARVNVTG---------VNGRRKRTVVMTSGSGNAGGAAAINRGP 218
P+++ ++ T ++ +V R+ + ++ GSGN P
Sbjct: 160 PIRVTLLQTGERSSRRSLFDVAEKPSGSLFDRAERPRRDSRSLSPGSGNEA-------AP 212
Query: 219 GSQGRRGGLRRSSQGRGRGQG-----QGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKS 273
G RG RRS + + G+ GRG GG R R R G + P K+
Sbjct: 213 G----RGRYRRSDVSKPPPENIDRYVPGQRNGRGWRGGENRSRNDSRRGVNGSRRP-KKT 267
Query: 274 ADDLDKELDNY 284
+ LD+E+++Y
Sbjct: 268 QEQLDQEMEDY 278
>gi|195578775|ref|XP_002079239.1| GD22109 [Drosophila simulans]
gi|194191248|gb|EDX04824.1| GD22109 [Drosophila simulans]
Length = 210
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 88/174 (50%), Gaps = 24/174 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ + MSLDDII + K + + R G R P SGG + G R +R
Sbjct: 1 MSDKMKMSLDDIIMMQSKKNKFINTKKGRVQGGSIRKPK---SGGGLRGIQR------SR 51
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
+ I KS NF +H L S T + V NL GV +DDI ELF+
Sbjct: 52 NGTGFIQKS-----NFKQEHALKPPSR----------PTFVMVCNLDYGVDDDDIMELFN 96
Query: 121 EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
+ G +++ +H+D+NG G+A++ + R DAF +++++ V LDG+ +K+ +V
Sbjct: 97 QDGLVEKALVHYDRNGSSLGTAQLSFKFREDAFQIIRQFHGVRLDGRRLKLHLV 150
>gi|408388313|gb|EKJ67999.1| hypothetical protein FPSE_11810 [Fusarium pseudograminearum CS3096]
Length = 357
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 26/197 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSV--SGGRMTGAARRG--PL 56
MA +D LD+II +S R R RG+GR R P G R R P
Sbjct: 1 MADKMDRGLDEIIAD-TRSNRPRNS----RGQGRRREPRNDFPRDGVRKVDFPRSPMMPT 55
Query: 57 SNARPSSYTI-----AKSFR---RTRNFPWQHDLFEDSLRAAGISGIEV---------GT 99
+PSS I A S R R + W HD FE++ + GT
Sbjct: 56 RPVQPSSQLILSMLGALSVRDDSRNIDSEWVHDRFEENNNRRAPAPRRRRESPEQDSKGT 115
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
K+ V N+H +T+DD+ ELF IG + R + +D+ GR G+A V Y R DA AA+ +
Sbjct: 116 KIRVDNIHYDLTDDDLSELFQRIGPISRLQLRYDRAGRSEGTAYVTYERNEDAKAAVLEF 175
Query: 160 NNVLLDGKPMKIEVVGT 176
+ +G+P+ + ++ +
Sbjct: 176 DRANANGQPIYLTLLPS 192
>gi|321477188|gb|EFX88147.1| hypothetical protein DAPPUDRAFT_221355 [Daphnia pulex]
Length = 386
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 6/78 (7%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E G ++YVSNLHP VT +DI ELF ++G L R ++ RP G AEVVY RR DA A
Sbjct: 255 ETGHRIYVSNLHPKVTQEDIVELFGDVGSLVRASLQ-----RP-GVAEVVYVRRDDALRA 308
Query: 156 LKRYNNVLLDGKPMKIEV 173
+ Y+N LDG PM +
Sbjct: 309 VDVYHNRQLDGLPMHCSM 326
>gi|348686699|gb|EGZ26513.1| hypothetical protein PHYSODRAFT_470000 [Phytophthora sojae]
Length = 209
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GTK+ V NL + +++RELF +GE+ + I +D++GR G A V +ARRSDA A+K
Sbjct: 52 GTKILVKNLKFDILEEEVRELFGTVGEVSKAEIVYDRSGRSKGIARVWFARRSDADKAIK 111
Query: 158 RYNNVLLDGKPMKIEV 173
+Y+ LDG+PM+I +
Sbjct: 112 QYDGRTLDGQPMQISL 127
>gi|221132363|ref|XP_002166508.1| PREDICTED: uncharacterized protein LOC100205695 [Hydra
magnipapillata]
Length = 273
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 11/101 (10%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+ K+ VSNLHP VT+DDI+ELF +G+L+R ++ G GSAEV+Y DAFAA
Sbjct: 157 LAAKVVVSNLHPNVTDDDIKELFGVLGDLRRASL----TGL--GSAEVIYKNTDDAFAAY 210
Query: 157 KRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKR 197
+Y+ LDG+PM +++ T+ + +N +G+ GR R
Sbjct: 211 SKYHGRNLDGQPMILKLTTTD-----ENDMNNSGIIGRSSR 246
>gi|410901627|ref|XP_003964297.1| PREDICTED: polymerase delta-interacting protein 3-like [Takifugu
rubripes]
Length = 473
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GTK+ V+NLHP V+ +DI ELF G LKR + G AEVV+ R+ DA +A +
Sbjct: 319 GTKITVNNLHPRVSEEDIVELFCVCGALKRARLVR------VGVAEVVFVRKEDAVSAYR 372
Query: 158 RYNNVLLDGKPMKIEV 173
+YNN LDG+PMK +
Sbjct: 373 KYNNRCLDGQPMKCNL 388
>gi|449275081|gb|EMC84066.1| THO complex subunit 4, partial [Columba livia]
Length = 134
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%)
Query: 116 RELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
+ELF+E G LK+ A+H+D++GR G+A+V + R++DA A+K+YN V LDG+PM I++V
Sbjct: 1 QELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 60
Query: 176 TNAE 179
+ +
Sbjct: 61 SQID 64
>gi|198424161|ref|XP_002119758.1| PREDICTED: similar to DNA polymerase delta interacting protein 3
[Ciona intestinalis]
Length = 428
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 7/83 (8%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSD 151
IS E GTK+ VSNLHP V DDI ELFS +G ++R + G G AE+V+ RR D
Sbjct: 293 ISPFE-GTKILVSNLHPIVVEDDILELFSVLGPVRRARM----VG--PGKAEIVFIRRDD 345
Query: 152 AFAALKRYNNVLLDGKPMKIEVV 174
A A ++YNN LDG+PM+++++
Sbjct: 346 AILAYQKYNNRDLDGQPMQMKLL 368
>gi|320031865|gb|EFW13822.1| RNA binding protein [Coccidioides posadasii str. Silveira]
Length = 361
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 139/339 (41%), Gaps = 75/339 (22%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRG---PSGSVSGGRMTGAARRGPLSNAR- 60
+D SLD+II R R +GR R+ GR RG P + R G PL+++R
Sbjct: 1 MDRSLDEIIAERP---RYSNRGRTRQSAGR-RGKFLPVTKLEFTRNGGLPPLLPLASSRR 56
Query: 61 ------------PS---SYTIAKSFRRTRN---------FPWQHDLFEDS--LRAAGISG 94
PS Y + SF N W HD FED R A G
Sbjct: 57 IVMGQPFEPQGIPSYDYDYRLTLSFFFCLNNSSSEMIAQIDWVHDKFEDDRDTRPASFRG 116
Query: 95 IEV---------------GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS 139
G KL V+NLH +T +D+R LF+ IG + ++ +D+ GR
Sbjct: 117 PRARRDGRLSPPPEQSSSGAKLRVNNLHYDITEEDLRGLFTGIGPILSLSLVYDRAGRSE 176
Query: 140 GSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTG--------- 190
G A V Y R DA A++ ++ G+P+++ ++ T ++ +V
Sbjct: 177 GVAFVTYKRLVDAQTAIREFDGANAKGQPIRVTLLQTGERSSRRSLFDVAEKPSGSLFDR 236
Query: 191 VNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQG-----QGRGRG 245
R+ + ++ GSGN PG RG RRS + + G+ G
Sbjct: 237 AERPRRDSRSLSPGSGNEA-------APG----RGRYRRSDVSKPPPENIDRYVPGQRNG 285
Query: 246 RGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
RG GG R R R G + P K+ + LD+E+++Y
Sbjct: 286 RGWRGGENRSRNDSRRGVNGSRRP-KKTQEQLDQEMEDY 323
>gi|169851299|ref|XP_001832340.1| RNA annealing factor [Coprinopsis cinerea okayama7#130]
gi|116506606|gb|EAU89501.1| RNA annealing factor [Coprinopsis cinerea okayama7#130]
Length = 229
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
+ K+ VSNL V ++ELF S +G L+ +H+D NG+ G A V ++R+ DA A
Sbjct: 71 LADKIIVSNLPIDVNEAQVKELFASTVGPLRDVTLHYDANGKSKGVAAVHFSRKGDANKA 130
Query: 156 LKRYNNVLLDGK-PMKIEVVGTNAE-IPLQARV 186
+YNN L+DGK PMKIE+V + +PL ARV
Sbjct: 131 YTQYNNRLIDGKRPMKIEIVVDPIKAVPLSARV 163
>gi|242216554|ref|XP_002474084.1| predicted protein [Postia placenta Mad-698-R]
gi|220726816|gb|EED80754.1| predicted protein [Postia placenta Mad-698-R]
Length = 208
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 88 RAAGISGIEVGTKLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVY 146
+ A + + K+ VSNL P V ++ELF + +G L+ +H+D GR G A V +
Sbjct: 51 KTAAPTAAQPSDKIIVSNLPPDVNELQVKELFHTTVGPLRDVTLHYDSQGRSKGVAAVQF 110
Query: 147 ARRSDAFAALKRYNNVLLDGK-PMKIEVV 174
RR D A ++YNN L+DGK PMKIE+V
Sbjct: 111 QRRGDGTKAFQQYNNRLIDGKRPMKIEIV 139
>gi|332372959|gb|AEE61621.1| unknown [Dendroctonus ponderosae]
Length = 426
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 63/122 (51%), Gaps = 13/122 (10%)
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISG-------IEVGTKLYVSNLHPGVTND 113
P+S K F RT N + D +D + GI I VG ++ VSNLHP VT D
Sbjct: 266 PASRVALKGFSRTSNVHSRLDGNQDQFNSHGIMSDIKTKVVIPVGHRIVVSNLHPSVTED 325
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DI+ELF + G+L + RP G AEV+Y D A+ Y+N LDG+PMK +
Sbjct: 326 DIKELFEDKGQLLSAKL-----VRP-GVAEVIYKHLKDGQKAVDTYHNRQLDGQPMKCLL 379
Query: 174 VG 175
V
Sbjct: 380 VN 381
>gi|328768986|gb|EGF79031.1| hypothetical protein BATDEDRAFT_90004 [Batrachochytrium
dendrobatidis JAM81]
Length = 168
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%)
Query: 90 AGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARR 149
A +S KL VSNL VT D+RELFS IG L+ ++++ G+ GSA V++ +
Sbjct: 4 APLSVAASADKLVVSNLAFNVTEADVRELFSRIGPLRSAQLNYNSEGKSKGSATVIFNKH 63
Query: 150 SDAFAALKRYNNVLLDGKPMKIEVV 174
DA A YNN LD +PMKIE++
Sbjct: 64 GDASKAFAEYNNRTLDERPMKIELI 88
>gi|170100094|ref|XP_001881265.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643944|gb|EDR08195.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 243
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 98/225 (43%), Gaps = 33/225 (14%)
Query: 78 WQHDLFEDSLRAA------GISGIEVGT---KLYVSNLHPGVTNDDIRELFSEIGELKRY 128
W HD RA G+S T KL VSNLH +T D+ +F +IG L R
Sbjct: 26 WLHDKAPTGPRATRQNIGLGVSPATTTTPNSKLVVSNLHYEITPKDLTAIFGQIGTLVRE 85
Query: 129 A-IHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVN 187
I +D++GR SG+A + + ++A A K+++ +L G+PM+I L R
Sbjct: 86 PLIRYDRSGRSSGTAFIAFETNAEATRAKKQFDGILAKGQPMEIVFDA------LPPR-- 137
Query: 188 VTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQ--GRRGGLRRSSQGRGRGQGQGRGRG 245
N RR +V TS N I + P R ++ G G G R
Sbjct: 138 ----NPRRSASVPSTSSLLN-----RIQKPPLVDRLSRDDSSIKTPSGPRAGNNVGPIRS 188
Query: 246 RGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
R G G GG + K K+A++LDKELD + +A +
Sbjct: 189 RPGRGAGGTAPATRAPKAPKKP----KTAEELDKELDAFMGDAPE 229
>gi|403412901|emb|CCL99601.1| predicted protein [Fibroporia radiculosa]
Length = 496
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 93/210 (44%), Gaps = 34/210 (16%)
Query: 78 WQHDLFEDSLRAAGISG--IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYA-IHFDK 134
W HD + ++G KL VSNLH +T D+ ++F ++G L R I +D+
Sbjct: 295 WLHDRAPIAPEVQNVNGSSTNATPKLIVSNLHYELTTKDLTQIFGQVGTLVREPLIRYDR 354
Query: 135 NGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGR 194
+GR SG A + + +A AA +RY+ L G+PM I A + R
Sbjct: 355 SGRSSGVAIISFETTPEATAAKQRYDGKLAKGQPMSI------------AFHQMQHPATR 402
Query: 195 RKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGR 254
+ RT G++ +NR + L R S R Q + R + G G R
Sbjct: 403 KGRTTT---------GSSLLNRI----QKPPLLDRLS----RTQSEPRDVSKKSGPGPVR 445
Query: 255 GRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
+ R + K P K+A+DLDKELD Y
Sbjct: 446 TKSRPVREPRAPKKP--KTAEDLDKELDAY 473
>gi|341878276|gb|EGT34211.1| CBN-ALY-2 protein [Caenorhabditis brenneri]
Length = 228
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 120/286 (41%), Gaps = 64/286 (22%)
Query: 2 ATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA-R 60
A+ +DM+L DII S KKSER++G G+ P V+GG +RG SNA
Sbjct: 4 ASSIDMALSDIISS-KKSERKKG----------GKKPIKRVTGG----IRKRGSTSNAGT 48
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
P + R F D + +L +SNL V + D+ ELF
Sbjct: 49 PRRQSGGGGRGGARKFTTSSGGLND----------KRTVRLNISNLARSVMSSDLEELFQ 98
Query: 121 EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI 180
+ L++ ++HF ++G PSG+A+++ ++R DA +K Y VLLD K M ++ T
Sbjct: 99 DFN-LRKVSVHFGEDGTPSGTADIILSKR-DADRLVKDYAGVLLDQKVMHFAIIET---- 152
Query: 181 PLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQ 240
SGNA AA G+ RR R S GR +
Sbjct: 153 ------------------------SGNAARAA---EARGTPNRRNSTGRPSNGRPANKIN 185
Query: 241 GRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHA 286
+ R + + R + K+A++LD ELD Y +
Sbjct: 186 AKS-PRSQKSTAKKSLTKKPKRDAKPQ----KTAEELDAELDAYMS 226
>gi|378726418|gb|EHY52877.1| hypothetical protein HMPREF1120_01083 [Exophiala dermatitidis
NIH/UT8656]
Length = 256
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 123/288 (42%), Gaps = 71/288 (24%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D SLD II S+KK++RE RR G+ G + V G + +
Sbjct: 1 MSGRLDQSLDSIIDSQKKAKREVR----RRKVGKPTGATAPVGGVKKS------------ 44
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGT-KLYVSNLHPGVTNDDIRELF 119
H + +++ A + I+ T K+ VS L V I+E F
Sbjct: 45 -------------------HKPAKSAIKPAAGTLIQAKTSKIVVSGLPHDVNEAQIKEYF 85
Query: 120 SE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
++ +G++K+ ++ +++NG+ G A++++ + A A K N +L+D +PMKIEVV +
Sbjct: 86 TKSVGKVKKVSLQYNQNGQSRGIADIIFVKPDSAAKAAKDLNGMLVDKRPMKIEVVVDAS 145
Query: 179 EIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQ 238
+P T A AA P +Q +S+ +
Sbjct: 146 HVPEP------------------TPAKSLADRVAA---NPKAQP------KSATADKKVT 178
Query: 239 GQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHA 286
G+ +GR G G RGR P K+A++LD E+ +Y A
Sbjct: 179 GKDGAKGRPAGRAGKPKRGRN-------PRPKPKTAEELDAEMTDYWA 219
>gi|392865823|gb|EAS31661.2| RNA binding protein [Coccidioides immitis RS]
Length = 317
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 125/311 (40%), Gaps = 63/311 (20%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II R + + RGR R A RRG S
Sbjct: 1 MDRSLDEIIAERPRY--------SNRGRTR-------------QSAGRRGNFSR---DEA 36
Query: 65 TIAKSFRRTR---NFPWQHDLFEDS--LRAAGISGIEV---------------GTKLYVS 104
+ KSFR R W HD FED R A G G KL V+
Sbjct: 37 RVHKSFRNDRADVELDWVHDKFEDDRDTRPASFRGPRARRDGRLSPPPEQSSSGAKLRVN 96
Query: 105 NLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLL 164
NLH +T +D+R LF+ IG + ++ +D+ GR G A V Y R DA A++ ++
Sbjct: 97 NLHYDITEEDLRGLFTGIGPILSLSLVYDRAGRSEGVAFVTYKRLVDAQTAIREFDGANA 156
Query: 165 DGKPMKIEVVGTN-----------AEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAA 213
G+P+++ ++ T AE P + + R R++ SG+ A G
Sbjct: 157 KGQPIRVTLLQTGERSSRRSLFDVAEKPRGSLFDRAERPRRDSRSLSPGSGNEAASGRGR 216
Query: 214 INRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKS 273
R S+ + R G+ G RG GG R R R G P K+
Sbjct: 217 YRRSDVSKPPPENIDRYVPGQRNG-------SRGWRGGENRSRNDSRRGVNGSGRP-KKT 268
Query: 274 ADDLDKELDNY 284
+ LD+E+++Y
Sbjct: 269 QEQLDQEMEDY 279
>gi|358055279|dbj|GAA98735.1| hypothetical protein E5Q_05423 [Mixia osmundae IAM 14324]
Length = 243
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 105/232 (45%), Gaps = 45/232 (19%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARR---GRGRGRGPSGSVSGGRMTGAARRGPLS 57
M+ ++D LD +I ++K+ R + GR R G G G PS + R G+A P S
Sbjct: 1 MSMNIDQPLDTVIAEKRKNNRSKRGGRGPRNTAGTG-GAAPSAPSARDRYAGSA---PAS 56
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGI-SGIEVGTKLYVSNLHPGVTNDDIR 116
N Q + A G+ SG++ G K+ VSNL VT + IR
Sbjct: 57 N-------------------KQAAKGQTGSGAVGLPSGLD-GHKIIVSNLPDDVTENQIR 96
Query: 117 ELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK-PMKIEVV 174
ELFS +G K ++ +D G+ G A + + +R DA A + YN L+DGK MK+E+V
Sbjct: 97 ELFSSTVGPCKSVSLSYDSKGKSKGVATIEFTKRGDATVAYQSYNKRLVDGKRQMKVEIV 156
Query: 175 GTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGG 226
+ P + + G + A+A N G S+GR GG
Sbjct: 157 VDPLKAPAKPLADRMGQAPAK---------------ASATNSGQESKGRSGG 193
>gi|299116448|emb|CBN76167.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 498
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 54/80 (67%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
+ GT+++V L+ V ++DI+ELF+ +G+L I FD+ GR +G+A V++ RR DA
Sbjct: 104 VVAGTRVHVGGLNFDVMDEDIKELFAGVGDLLHCKIDFDRTGRSNGNALVIFKRREDAEN 163
Query: 155 ALKRYNNVLLDGKPMKIEVV 174
A+ +++ LDG PM +E+V
Sbjct: 164 AVSQFHKRTLDGTPMIVEIV 183
>gi|195351085|ref|XP_002042067.1| GM26087 [Drosophila sechellia]
gi|194123891|gb|EDW45934.1| GM26087 [Drosophila sechellia]
Length = 207
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 24/174 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ ++MSLDDII + K + R G R P SGG + G + ++R
Sbjct: 1 MSDKMNMSLDDIIMMQSKKNKFINTKNGRVQGGSIRKPK---SGGGLRG------IQSSR 51
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
+ I KS F +H L S T + V NL GV +DDI ELF+
Sbjct: 52 NGTGFIQKS-----KFKQEHALKPPS----------KPTFVMVCNLDYGVDDDDIMELFN 96
Query: 121 EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
+ G +++ +H+D+NG G+A++ + R DAF +++++ V LDG+ +K+ +V
Sbjct: 97 QDGLVEKALVHYDRNGNSLGTAQLSFKFREDAFQIIRQFHGVRLDGRRLKLHLV 150
>gi|121713216|ref|XP_001274219.1| RNA binding protein, putative [Aspergillus clavatus NRRL 1]
gi|119402372|gb|EAW12793.1| RNA binding protein, putative [Aspergillus clavatus NRRL 1]
Length = 332
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 136/344 (39%), Gaps = 116/344 (33%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II R + + +GR +G+G+GR G
Sbjct: 1 MDRSLDEIIAERPNQNQNQNRGRRPQGQGQGRRRDG------------------------ 36
Query: 65 TIAKSFRRTR---NFPWQHDLFEDS----------------LRAAGISGIEVGTKLYVSN 105
+ KS++ R + W HD +ED AG G+K+ V N
Sbjct: 37 -VKKSYKEERVDLDLDWVHDRYEDDRDTRPARAPRRPRGDRYSPAGEHSA-TGSKIRVEN 94
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLD 165
LH +T D+ +LF+ IG + ++ +D+ GR G A V Y R SDA A+ ++
Sbjct: 95 LHYDITESDLEDLFTRIGPITNLSLVYDRAGRSEGVAYVTYNRVSDARTAISEFDGANAK 154
Query: 166 GKPMKIEVVGT-------------NAEIP---LQARVNVTGVNGRRKRTVVMTSGSGNAG 209
G+P+++ +V N E P L RV R + ++ GS +
Sbjct: 155 GQPIRLALVAAGSGGGRRDRNPFDNVERPKGSLFDRVE------RPRNARSLSPGSDHGD 208
Query: 210 -------------------------GAAAINRG-PGSQGRRGGLRRSSQGRGRGQGQGRG 243
I+R PG +R +RRS+ GR +G+
Sbjct: 209 ADDGARRRRGRRGGAGGRRSDVSKPAPDHIDRYVPG---QRSPVRRSANGRRQGE----- 260
Query: 244 RGRGGGGGGGRGRGRGRGRGQGKKNP---VDKSADDLDKELDNY 284
R RGRG+G++NP K+ ++LD+E+D+Y
Sbjct: 261 ------------RRDDRGRGEGRRNPNARPKKTQEELDQEMDDY 292
>gi|226470070|emb|CAX70316.1| Polymerase delta-interacting protein 3 [Schistosoma japonicum]
Length = 322
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 76 FPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN 135
P+ S +S I+ G ++ + NL P VT DD+ ELFS +G L+ +
Sbjct: 149 LPFNEVPVSTSTSGPKVSPIQ-GFRVEIRNLQPSVTLDDVFELFSSVGSLRLCTV----- 202
Query: 136 GRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI 180
RP G AEV+Y SDA A++RYN LDG+PM++ + +EI
Sbjct: 203 TRP-GQAEVIYNHSSDALEAIERYNGRELDGRPMRVSLTTPVSEI 246
>gi|256082893|ref|XP_002577686.1| RNA and export factor binding protein [Schistosoma mansoni]
gi|353232783|emb|CCD80139.1| putative rna and export factor binding protein [Schistosoma
mansoni]
Length = 320
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSD 151
IS I+ G ++ + NL P VT DD+ ELFS +G L+ + RP G AEV+Y SD
Sbjct: 164 ISPIQ-GFRVEIRNLQPSVTLDDVFELFSSVGSLRLCTV-----TRP-GQAEVIYNHSSD 216
Query: 152 AFAALKRYNNVLLDGKPMKIEVVGTNAEIP 181
A A++RYN LDG+PM++ + +++P
Sbjct: 217 ALEAIERYNGRELDGRPMRVSLTTPVSDLP 246
>gi|327352914|gb|EGE81771.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 313
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 82/200 (41%), Gaps = 44/200 (22%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRG-----------PSGSVSGGRMTGAARR 53
+D SLD+II R S R + + R RR G PS V ++ +
Sbjct: 1 MDRSLDEIIAERPSSNRGQARNRPRRSNAPRNGVKKVLLLFLSHPSRIVKADKLPACSS- 59
Query: 54 GPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISG---------------IEVG 98
SS I W HD FED G + G
Sbjct: 60 --------SSQAIGD---------WVHDKFEDDRNTPSYRGSRARRLDRYSPEPEQPQTG 102
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
KL V+NLH +T DD+ +LF+ IG + ++ +D+ GR G A V Y R DA A++
Sbjct: 103 AKLRVTNLHYDLTEDDLEDLFTRIGPINALSLRYDRAGRSEGVAFVTYKRLVDAQTAIRE 162
Query: 159 YNNVLLDGKPMKIEVVGTNA 178
++ G+P+ + ++ + +
Sbjct: 163 FDGANAKGQPITLTMMSSTS 182
>gi|226470072|emb|CAX70317.1| Polymerase delta-interacting protein 3 [Schistosoma japonicum]
gi|226489166|emb|CAX74932.1| Polymerase delta-interacting protein 3 [Schistosoma japonicum]
Length = 322
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 76 FPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN 135
P+ S +S I+ G ++ + NL P VT DD+ ELFS +G L+ +
Sbjct: 149 LPFNEVPVSTSSSGPKVSPIQ-GFRVEIRNLQPSVTLDDVFELFSSVGSLRLCTV----- 202
Query: 136 GRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI 180
RP G AEV+Y SDA A++RYN LDG+PM++ + +EI
Sbjct: 203 TRP-GQAEVIYNHSSDALEAIERYNGRELDGRPMRVSLTTPVSEI 246
>gi|242022922|ref|XP_002431886.1| hypothetical protein Phum_PHUM556460 [Pediculus humanus corporis]
gi|212517227|gb|EEB19148.1| hypothetical protein Phum_PHUM556460 [Pediculus humanus corporis]
Length = 446
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 15/130 (11%)
Query: 55 PLSNARPSSYTIAKSFRRTRNFPWQH-DLFEDSL--------RAAGISGIEVGTKLYVSN 105
P++ ++P T+++ F + N Q ++ + L ++ + +G ++ VSN
Sbjct: 288 PMARSKPPPRTLSERFCQEGNMTTQKANMLKSKLDINAKNMKNSSPDVQVPIGHRIVVSN 347
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLD 165
L P VT++D++ELF +IGEL K RP G+AEVVY DA A+ Y+N LD
Sbjct: 348 LVPSVTHEDVKELFEDIGELIS-----SKVVRP-GTAEVVYKLHKDAVKAVDVYHNRQLD 401
Query: 166 GKPMKIEVVG 175
G+PMK +V
Sbjct: 402 GQPMKCLLVN 411
>gi|327293694|ref|XP_003231543.1| hypothetical protein TERG_07841 [Trichophyton rubrum CBS 118892]
gi|326466171|gb|EGD91624.1| hypothetical protein TERG_07841 [Trichophyton rubrum CBS 118892]
Length = 338
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 81/193 (41%), Gaps = 37/193 (19%)
Query: 5 VDMSLDDIIKSRKKSERERG---QGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP 61
+D SLD+II R + R RG G RR RG G RR +R
Sbjct: 1 MDQSLDEIIAERPDASRPRGGRMAGSRRRNNFRGS----------HKGCKRRTVSRKSRL 50
Query: 62 SSYTIAKSFRRTRNFPWQHDLFEDS----------------LRAAGISGIEVGTKLYVSN 105
Y W HD FED + G K+ VSN
Sbjct: 51 MGYVFGSD--------WVHDRFEDDRDSRSSRPPRQPRTDRYNSGPADHDSRGAKIRVSN 102
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLD 165
+H +T +D+ ELF+ IG + ++ +D+ GR G+A V Y R SDA A+ ++
Sbjct: 103 IHYDLTQEDLEELFTRIGPVYSVSLLYDRAGRSEGTAFVTYKRLSDAETAIHEFDGANAK 162
Query: 166 GKPMKIEVVGTNA 178
G+P+++ +V + A
Sbjct: 163 GQPIRLTLVPSAA 175
>gi|350583738|ref|XP_003126034.3| PREDICTED: polymerase delta-interacting protein 3-like [Sus scrofa]
Length = 389
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 9/77 (11%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 304 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 355
Query: 151 DAFAALKRYNNVLLDGK 167
DA A K+YNN LDG+
Sbjct: 356 DAITAYKKYNNRCLDGE 372
>gi|226489164|emb|CAX74931.1| Polymerase delta-interacting protein 3 [Schistosoma japonicum]
Length = 322
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 76 FPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN 135
P+ S +S I+ G ++ + NL P VT DD+ ELFS +G L+ +
Sbjct: 149 LPFNEVPVSTSSSGPKVSPIQ-GFRVEIRNLQPSVTLDDVFELFSSVGSLRLCTV----- 202
Query: 136 GRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI 180
RP G AEV+Y SDA A++RYN LDG+PM++ + +EI
Sbjct: 203 TRP-GQAEVIYNHSSDALEAIERYNGRELDGRPMRVSLTTPVSEI 246
>gi|239611834|gb|EEQ88821.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 350
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 82/200 (41%), Gaps = 44/200 (22%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRG-----------PSGSVSGGRMTGAARR 53
+D SLD+II R S R + + R RR G PS V ++ +
Sbjct: 1 MDRSLDEIIAERPPSNRGQARNRPRRSNAPRNGVKKVLLLFLSHPSRIVKADKLPACSS- 59
Query: 54 GPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISG---------------IEVG 98
SS I W HD FED G + G
Sbjct: 60 --------SSQAIGD---------WVHDKFEDDRNTPSYRGSRARRLDRYSPEPEQPQTG 102
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
KL V+NLH +T DD+ +LF+ IG + ++ +D+ GR G A V Y R DA A++
Sbjct: 103 AKLRVTNLHYDLTEDDLEDLFTRIGPINALSLRYDRAGRSEGVAFVTYKRLVDAQTAIRE 162
Query: 159 YNNVLLDGKPMKIEVVGTNA 178
++ G+P+ + ++ + +
Sbjct: 163 FDGANAKGQPITLTMMSSTS 182
>gi|67901438|ref|XP_680975.1| hypothetical protein AN7706.2 [Aspergillus nidulans FGSC A4]
gi|40742031|gb|EAA61221.1| hypothetical protein AN7706.2 [Aspergillus nidulans FGSC A4]
gi|259484052|tpe|CBF79945.1| TPA: RNA binding protein, putative (AFU_orthologue; AFUA_5G08310)
[Aspergillus nidulans FGSC A4]
Length = 328
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 47/191 (24%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II R + R+ RG+ RGP G R G
Sbjct: 1 MDRSLDEIIAERPQ----------RQNRGQNRGPRNQ--GRRSNG--------------- 33
Query: 65 TIAKSFRRTR---NFPWQHDLFEDS----------------LRAAGISGIEVGTKLYVSN 105
+ K +R R + W HD +ED + GT+L + N
Sbjct: 34 -VKKPYRDERVDLDLDWVHDKYEDDRDTRPSRGGRRPRVDRYSPSPDRSASAGTRLRIEN 92
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLD 165
LH +T D+ ELFS IG + ++ +D+ GR G A V Y+R +DA A+ ++
Sbjct: 93 LHYDITETDLEELFSRIGPISNVSLVYDRAGRSEGVAYVTYSRYNDAKTAIAEFDGANAK 152
Query: 166 GKPMKIEVVGT 176
G+P++I + +
Sbjct: 153 GQPIRISITSS 163
>gi|167538131|ref|XP_001750731.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770755|gb|EDQ84436.1| predicted protein [Monosiga brevicollis MX1]
Length = 218
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 55/79 (69%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
TKL VSNL V +D+RELF + G L+ +++D++GR G+AEV++ + A AA +
Sbjct: 13 TKLLVSNLAFDVLEEDLRELFGKHGALRACNMNYDRSGRSQGTAEVIFQSAASARAAYEA 72
Query: 159 YNNVLLDGKPMKIEVVGTN 177
YN VLLDGKP++IE+V +
Sbjct: 73 YNQVLLDGKPLQIELVADD 91
>gi|384490751|gb|EIE81973.1| hypothetical protein RO3G_06678 [Rhizopus delemar RA 99-880]
Length = 477
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L VSNLH VT D+ +LF +IG L+R +H NG+ +G A+VV+ +DA A YN
Sbjct: 60 LVVSNLHFNVTEKDLYDLFGQIGSLRRAFLHIGPNGKSAGVADVVFVNSNDAERARVTYN 119
Query: 161 NVLLDGKPMKI 171
NV LDG+PM I
Sbjct: 120 NVQLDGRPMHI 130
>gi|261201622|ref|XP_002628025.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239590122|gb|EEQ72703.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 350
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 82/200 (41%), Gaps = 44/200 (22%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRG-----------PSGSVSGGRMTGAARR 53
+D SLD+II R S R + + R RR G PS V ++ +
Sbjct: 1 MDRSLDEIIAERPSSNRGQARNRPRRSNAPRNGVKKVLLLFLSHPSRIVKADKLPACSS- 59
Query: 54 GPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISG---------------IEVG 98
SS I W HD FED G + G
Sbjct: 60 --------SSQAIGD---------WVHDKFEDDRNTPSYRGSRARRLDRYSPEPEQPQTG 102
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
KL V+NLH +T DD+ +LF+ IG + ++ +D+ GR G A V Y R DA A++
Sbjct: 103 AKLRVTNLHYDLTEDDLEDLFTRIGPINALSLRYDRAGRSEGVAFVTYKRLVDAQTAIRE 162
Query: 159 YNNVLLDGKPMKIEVVGTNA 178
++ G+P+ + ++ + +
Sbjct: 163 FDGANAKGQPITLTMMSSTS 182
>gi|367019886|ref|XP_003659228.1| hypothetical protein MYCTH_2055144 [Myceliophthora thermophila ATCC
42464]
gi|347006495|gb|AEO53983.1| hypothetical protein MYCTH_2055144 [Myceliophthora thermophila ATCC
42464]
Length = 351
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 13/122 (10%)
Query: 66 IAKSFR----RTRNFPWQHDLFED--SLRAAG-------ISGIEVGTKLYVSNLHPGVTN 112
+ KSFR R + W HD FED + R+A + GTKL V NLH +T
Sbjct: 39 VRKSFRDDAPRNLDSEWVHDKFEDYGTRRSAPRRRYSPEPTSETRGTKLRVDNLHYELTQ 98
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
+D+ +LFS IG L + +D+ GR G+A V Y R DA A++ Y+ G+P+++
Sbjct: 99 EDLEDLFSRIGPLISLEMKYDRAGRSEGTAFVTYESRRDALQAIREYDGANAAGQPIRLT 158
Query: 173 VV 174
++
Sbjct: 159 LL 160
>gi|428184064|gb|EKX52920.1| hypothetical protein GUITHDRAFT_161108 [Guillardia theta CCMP2712]
Length = 248
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIG-ELKRYAIHFDKNG 136
+ HD D AA G K+ VSNL PGVT+ D+ EL E G +K I + K+G
Sbjct: 63 YMHDDRTDPEPAAPKELSTAGVKMLVSNLAPGVTDQDLEELCEEHGGPVKSAEIFYKKDG 122
Query: 137 RPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQA------RVNVTG 190
+G EVV+ +R+ A LK V LDG P+K+ +VG +P QA V +TG
Sbjct: 123 ASTGQGEVVFRQRAHAEKVLKGLQGVPLDGLPLKLALVG----VPAQAATSQPTMVTITG 178
Query: 191 V 191
+
Sbjct: 179 I 179
>gi|426394703|ref|XP_004063627.1| PREDICTED: polymerase delta-interacting protein 3 [Gorilla gorilla
gorilla]
Length = 263
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 9/76 (11%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 195 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 246
Query: 151 DAFAALKRYNNVLLDG 166
DA A K+YNN LDG
Sbjct: 247 DAITAYKKYNNRCLDG 262
>gi|430812736|emb|CCJ29857.1| unnamed protein product [Pneumocystis jirovecii]
Length = 237
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 44/185 (23%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
++ SLDDII RK S R RR NAR + Y
Sbjct: 3 LEKSLDDIINDRKISRNSRTSD----------------------WILRRRFFKNARLAPY 40
Query: 65 TIAKSF-RRTRNFPWQHDLFEDSLRAAGISGIEVG---TKLY------------VSNLHP 108
+ +F +R N PW HDL+E G++ VG +LY + NLH
Sbjct: 41 YKSINFYKRNYNEPWTHDLYE------GLAEKPVGRISKQLYRPPSKGLSYRVKIENLHY 94
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
+T DD+ LF +IG + + +I +D++GR +G+A V + R DA A+ ++N G+P
Sbjct: 95 ELTEDDLNGLFKKIGPVTKLSIKYDRSGRSTGTAYVNFERIEDAHNAINQFNGANAAGQP 154
Query: 169 MKIEV 173
+ + +
Sbjct: 155 ITLTL 159
>gi|72087247|ref|XP_787816.1| PREDICTED: polymerase delta-interacting protein 3-like
[Strongylocentrotus purpuratus]
Length = 413
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GT+L +SNL VT DDI+ELF IGEL + + +P G AEVVY R+DA A+
Sbjct: 269 GTRLIISNLQISVTVDDIKELFGAIGELTKTRM-----VKP-GLAEVVYVSRTDAIQAIS 322
Query: 158 RYNNVLLDGKPMKIEV 173
Y+N LDGKPM ++
Sbjct: 323 TYHNRELDGKPMLCKL 338
>gi|400600157|gb|EJP67848.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 251
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 117/293 (39%), Gaps = 76/293 (25%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D LDDI+ +R+KS R R GR T AA G + A+
Sbjct: 1 MSGKLDKPLDDIVSARRKSAGNRRSQRRTAGR---------------TAAAPAGGVHKAK 45
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG----TKLYVSNLHPGVTNDDIR 116
P+ A G+ G G +K+ VSNL V+ I+
Sbjct: 46 PAPRGAATK---------------------GVQGRTAGPLGESKVIVSNLPKDVSEQQIK 84
Query: 117 ELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
E F + +G +KR + + N + G A V++ + A A ++ N +L+DG+P+KIE+V
Sbjct: 85 EYFVQSVGPIKRVELSYGPNSQSRGIANVLFHKPDGASRAFQKLNGLLVDGRPIKIEIVV 144
Query: 176 TNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRG 235
A QA + V +R P SQ + + S G
Sbjct: 145 GAA----QADKVIPPVKTLAERAT-----------------QPKSQPKSAAAGKQSNNAG 183
Query: 236 RGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEA 288
+ G +GR G+GR P K+A +LD ++DNY A++
Sbjct: 184 K--------------DGAKGRAAGKGRRGRNARPTKKTATELDADMDNYMADS 222
>gi|409048162|gb|EKM57640.1| hypothetical protein PHACADRAFT_251375 [Phanerochaete carnosa
HHB-10118-sp]
Length = 220
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 100 KLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
K+ VSNL P V IRELF + +G L+ +H+D G G A V ++R+ D A ++
Sbjct: 62 KIIVSNLPPDVNEVQIRELFQTTVGPLRDVTLHYDNKGASKGVAAVQFSRKGDGTKAYQQ 121
Query: 159 YNNVLLDGK-PMKIEVV 174
YNN L+DGK PMKIE+V
Sbjct: 122 YNNRLIDGKRPMKIEIV 138
>gi|449295901|gb|EMC91922.1| hypothetical protein BAUCODRAFT_152279 [Baudoinia compniacensis
UAMH 10762]
Length = 255
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VSNL +T +++ F++ +G +K+ + + NGR G A V++++ + A A+K
Sbjct: 68 SKIIVSNLPQDITELLLKDFFAKAVGSVKKVLLSYGPNGRSRGEATVIFSKPNAAAEAMK 127
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIP 181
++NNV +D +PMKIE+VG++ P
Sbjct: 128 QFNNVKVDNRPMKIEIVGSSIAAP 151
>gi|403173210|ref|XP_003332304.2| hypothetical protein PGTG_14600 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170176|gb|EFP87885.2| hypothetical protein PGTG_14600 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 303
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 112/253 (44%), Gaps = 44/253 (17%)
Query: 72 RTRNFPWQHDLFED--------------SLRAAGISGIEVG--TKLYVSNLHPGVTNDDI 115
R N W+HDLFE+ ++ A G ++ G T L ++NLH V+ ++
Sbjct: 30 RQTNDSWKHDLFENGDTKASSNPPRQLRTVDAPGDEEVDQGRSTSLLITNLHYDVSEAEL 89
Query: 116 RELFSEIGELKR-YAIHFDKNGRPS-GSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
LFS+IG+L R I FD++GR + G A V YA S A AA++ +N G+P+ ++
Sbjct: 90 EALFSQIGKLDRGPFIKFDQSGRATEGLAFVSYANESHAEAAIEAFNGASAKGQPIGVQY 149
Query: 174 VGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAG------GAAAINRGPGSQGRRGGL 227
IPL R + G++GR+ + S G G + P R G
Sbjct: 150 ---EYGIPLWVRTAL-GISGRQATAEGVPSTFGLLGRMQQDRPTGRPHFSPYDANRPRGP 205
Query: 228 RRS--SQGRGRGQGQGRG--RGRGGGGGGGRGRG------RGRGRGQGKKNPVD------ 271
R S GR R GR R G G R RG GR R G +
Sbjct: 206 RSSFPPVGRPRAPSNGRDYRRTADSFGSGIRSRGGPAHRHSGRPRWTGDRPAARSGAGGV 265
Query: 272 KSADDLDKELDNY 284
KSA +LDKEL+ +
Sbjct: 266 KSARELDKELEAF 278
>gi|336375591|gb|EGO03927.1| hypothetical protein SERLA73DRAFT_175623 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388707|gb|EGO29851.1| hypothetical protein SERLADRAFT_458167 [Serpula lacrymans var.
lacrymans S7.9]
Length = 223
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 100 KLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
K+ VSNL V I+ELF S +G L+ +H+D GR G A V + R+ D A ++
Sbjct: 69 KIIVSNLPQDVNEAQIKELFHSTVGALREVTLHYDSAGRSKGVAAVHFQRKGDGTKAYQQ 128
Query: 159 YNNVLLDGK-PMKIEVV 174
YNN L+DGK PMKIE+V
Sbjct: 129 YNNRLIDGKRPMKIEIV 145
>gi|194387136|dbj|BAG59934.1| unnamed protein product [Homo sapiens]
Length = 186
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 9/76 (11%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHFDKNGRPSGSAEVVYARRS 150
+S +E GTK+ V+NLHP VT +DI ELF G LKR +H G AEVV+ ++
Sbjct: 118 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVH-------PGVAEVVFVKKD 169
Query: 151 DAFAALKRYNNVLLDG 166
DA A K+YNN LDG
Sbjct: 170 DAITAYKKYNNRCLDG 185
>gi|322701005|gb|EFY92756.1| RNA binding protein, putative [Metarhizium acridum CQMa 102]
Length = 365
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 17/145 (11%)
Query: 71 RRTRNFPWQHDLFEDSLRAAGISGIEV---------GTKLYVSNLHPGVTNDDIRELFSE 121
RR + W HD +++S G + G+K+ V N+H +T +D+ ELF+
Sbjct: 106 RRNIDSEWVHDRYDESESRRGPASRRRRDSPVSDNKGSKIRVENIHYDLTEEDLDELFAR 165
Query: 122 IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI- 180
IG + R + +D+ GR G A V Y +R DA A+K+++ +G+P+++ ++ +
Sbjct: 166 IGRVSRLNLRYDRAGRSEGVAYVTYEQREDAEEAIKQFDGANANGQPIRLTLLPSRNPFD 225
Query: 181 -------PLQARVNVTGVNGRRKRT 198
PL R++ G GR + T
Sbjct: 226 TAVMPGRPLAERISAPGAGGRARST 250
>gi|330793081|ref|XP_003284614.1| hypothetical protein DICPUDRAFT_75578 [Dictyostelium purpureum]
gi|325085413|gb|EGC38820.1| hypothetical protein DICPUDRAFT_75578 [Dictyostelium purpureum]
Length = 294
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
G++L +SNLH +T +D+R +F +IGE+K I++D++GR GS VV+++ DA A
Sbjct: 206 TGSRLNISNLHHAITINDLRLVFEKIGEIKTIKINYDRSGRSEGSGYVVFSKDVDAKHAY 265
Query: 157 KRYNNVLLDG 166
+RYN LDG
Sbjct: 266 ERYNGAQLDG 275
>gi|449544426|gb|EMD35399.1| hypothetical protein CERSUDRAFT_116173 [Ceriporiopsis subvermispora
B]
Length = 219
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 100 KLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
K+ VSNL V ++ELF + +G L+ +H+D GR G A V + RR D A ++
Sbjct: 66 KIIVSNLPLDVNELQVKELFHTTVGPLRDVTLHYDAQGRSKGVAAVHFQRRGDGTKAFQQ 125
Query: 159 YNNVLLDGK-PMKIEVV 174
YNN L+DGK PMKIE+V
Sbjct: 126 YNNRLIDGKRPMKIEIV 142
>gi|358253500|dbj|GAA53299.1| polymerase delta-interacting protein 3 [Clonorchis sinensis]
Length = 172
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
Query: 85 DSLRAAGISGIEV----GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSG 140
++L + +SG +V G ++ + NL P VT DD+ ELFS IG L+ + RP G
Sbjct: 2 EALASIPVSGTKVSPIQGFRVEIRNLQPSVTLDDVFELFSSIGTLRLCNLI-----RP-G 55
Query: 141 SAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIP 181
AEVV+ SDA A++RYNN LDG+PM + ++ + P
Sbjct: 56 HAEVVFNEASDAREAVRRYNNRELDGRPMNVALITQVPDSP 96
>gi|346318895|gb|EGX88497.1| RNA annealing protein Yra1, putative [Cordyceps militaris CM01]
Length = 264
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 123/293 (41%), Gaps = 81/293 (27%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D LDDI+ +R+KS G R++RG + GR T + A+
Sbjct: 1 MSGKLDKPLDDIVSARRKSA---GSRRSQRG-----------AAGRPTAG-----IQKAK 41
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
P++ IA P Q +A G G +K+ VSNL V+ I+E F
Sbjct: 42 PTARNIA-------GKPAQG-------KATGPQG---ESKVIVSNLPKDVSEQQIKEYFV 84
Query: 121 E-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
+ +G +KR + + N + G A V++ + A A ++ N +L+DG+P+KIE+V A+
Sbjct: 85 QSVGPIKRVELSYGPNSQSRGIANVIFHKPDGASRAFQKLNGLLVDGRPIKIEIVVGAAQ 144
Query: 180 ----IPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRG 235
IP R +T+ RSSQ +
Sbjct: 145 ADKVIP-------------RVKTLA---------------------------ERSSQPKA 164
Query: 236 RGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAEA 288
+ + G+ G G G+GR P K+A +LD ++DNY A++
Sbjct: 165 QPRSAAAGKQINNAGKDGAKGKAGKGRRGRDARPAKKTATELDADMDNYMADS 217
>gi|119183879|ref|XP_001242919.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 1048
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 134/321 (41%), Gaps = 81/321 (25%)
Query: 4 HVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS--NARP 61
++D SLD+II R + RGR R +G RRG S AR
Sbjct: 731 NMDRSLDEIIAERPRYS----------NRGRTRQSAG-----------RRGNFSRDEAR- 768
Query: 62 SSYTIAKSFRRTR---NFPWQHDLFEDS--LRAAGISGIEV---------------GTKL 101
+ KSFR R W HD FED R A G G KL
Sbjct: 769 ----VHKSFRNDRADVELDWVHDKFEDDRDTRPASFRGPRARRDGRLSPPPEQSSSGAKL 824
Query: 102 YVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNN 161
V+NLH +T +D+R LF+ IG + ++ +D+ GR G A V Y R DA A++ ++
Sbjct: 825 RVNNLHYDITEEDLRGLFTGIGPILSLSLVYDRAGRSEGVAFVTYKRLVDAQTAIREFDG 884
Query: 162 VLLDGKPMKIEVVGTNAEIPLQARVNVT-----GVNGR----RKRTVVMTSGSGNAGGA- 211
G+P+++ ++ T ++ +V + R R+ + ++ GSGN +
Sbjct: 885 ANAKGQPIRVTLLQTGERSSRRSLFDVAEKPRGSLFDRAERPRRDSRSLSPGSGNEAASG 944
Query: 212 ------AAINRGPGSQGRR--GGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRG 263
+ +++ P R G R S+G G+ + R R G G GR +
Sbjct: 945 RGRYRRSDVSKPPPENIDRYVPGQRNGSRGWRGGENRSRNDSRRGVNGSGRPK------- 997
Query: 264 QGKKNPVDKSADDLDKELDNY 284
K+ + LD+E+++Y
Sbjct: 998 --------KTQEQLDQEMEDY 1010
>gi|46124955|ref|XP_387031.1| hypothetical protein FG06855.1 [Gibberella zeae PH-1]
Length = 323
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 78 WQHDLFEDSLRAAGISGIEV---------GTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
W HD FE++ + GTK+ V N+H +T+DD+ ELF IG + R
Sbjct: 57 WVHDRFEENNNRRAPAPRRRRESPEQDSKGTKIRVDNIHYDLTDDDLSELFQRIGPISRL 116
Query: 129 AIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
+ +D+ GR G+A V Y R DA AA+ ++ +G+P+ + ++ +
Sbjct: 117 QLRYDRAGRSEGTAYVTYERNEDAKAAILEFDRANANGQPIYLTLLPS 164
>gi|357503119|ref|XP_003621848.1| THO complex subunit [Medicago truncatula]
gi|355496863|gb|AES78066.1| THO complex subunit [Medicago truncatula]
Length = 106
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
LFS+ EL+ Y+IH+D+ G G+AEV + R SDA AAL+R N + L GK ++IE+VGT
Sbjct: 29 LFSKNDELEGYSIHYDQFGESKGTAEVFFTRESDALAALRRCNQMKLYGKTLQIELVGTT 88
Query: 178 AEIP 181
P
Sbjct: 89 LVTP 92
>gi|253761298|ref|XP_002489078.1| hypothetical protein SORBIDRAFT_0120s002030 [Sorghum bicolor]
gi|241947046|gb|EES20191.1| hypothetical protein SORBIDRAFT_0120s002030 [Sorghum bicolor]
Length = 132
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%)
Query: 104 SNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNV 162
S L P + +ELFS++G +KRY+I+ D++ R G+AEV+++RRSDA AA+KRYN
Sbjct: 72 STLPPPRSLLSFKELFSDVGHIKRYSINCDRSRRSKGTAEVIFSRRSDALAAVKRYNKC 130
>gi|238495444|ref|XP_002378958.1| RNA binding protein, putative [Aspergillus flavus NRRL3357]
gi|220695608|gb|EED51951.1| RNA binding protein, putative [Aspergillus flavus NRRL3357]
gi|391872287|gb|EIT81421.1| alpha-actinin, sarcomeric [Aspergillus oryzae 3.042]
Length = 322
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 18/129 (13%)
Query: 66 IAKSFRRTR---NFPWQHDLFEDSL---------------RAAGISGIEVGTKLYVSNLH 107
+ KS+R R + W HD +ED + G KL + NLH
Sbjct: 35 VRKSYREERPDLDLDWVHDKYEDDRDSRPSRAPRRPRGDRYSPPPDHAPTGAKLRIENLH 94
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
+T D+ +LF+ IG + ++ +D+ GR G A V Y R SDA A+ ++ G+
Sbjct: 95 YDITESDLEDLFTRIGPISNLSLVYDRAGRSEGVAFVTYERPSDARTAISEFDGANAKGQ 154
Query: 168 PMKIEVVGT 176
P+++ +V T
Sbjct: 155 PIRVTLVST 163
>gi|402083585|gb|EJT78603.1| hypothetical protein GGTG_03702 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 327
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 54/256 (21%)
Query: 66 IAKSFR---RTRNFPWQHDLFED------------SLRAAGISGIEVGTKLYVSNLHPGV 110
+ KS+R R + W HD F+D + A SG GTK+ V N+H +
Sbjct: 54 VRKSYRDEPRNLDSEWVHDKFDDNDSRRGRLPRRRAESAEQESGGPKGTKIRVDNIHYEL 113
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMK 170
T +D++ LF+ IG ++ + +D++GR G+A VVY DA A+K ++ G+P++
Sbjct: 114 TEEDLQGLFNGIGPIRELDLVYDRSGRSEGTAYVVYESYKDATLAVKEFDGANAAGQPIR 173
Query: 171 IEVVGT---------NAEI----PLQARVNVTGVNGRRKRTVV----MTSGSGNAGGAAA 213
+ ++ + + I PL R+ + R R++ + + + G
Sbjct: 174 LTILPSGPSSRRNPFDTAIKPGRPLSERIT---THSSRTRSLSPRQELEADAARKGIDRY 230
Query: 214 I-----NRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKN 268
I +R P + RR G RR R RG GR + GRG R +
Sbjct: 231 IPGGSRSRSPYAPPRREGGRRPGARRERG-----GRSQQSEESAGRGERNTRPK------ 279
Query: 269 PVDKSADDLDKELDNY 284
K+ ++LD E+++Y
Sbjct: 280 ---KTQEELDAEMEDY 292
>gi|225711646|gb|ACO11669.1| Polymerase delta-interacting protein 3 [Caligus rogercresseyi]
Length = 367
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G K+ V NLH VT +DI ELF ++G LKR + P G+AEVV+ R DA A++
Sbjct: 294 GAKVVVGNLHNTVTQEDIVELFGDVGPLKRVKV-----VNP-GTAEVVFVNRDDALKAVE 347
Query: 158 RYNNVLLDGKPMKIEVVGTN 177
+N LDGK MK +++G N
Sbjct: 348 TCHNRQLDGKAMKCQLIGAN 367
>gi|195472401|ref|XP_002088489.1| GE12174 [Drosophila yakuba]
gi|194174590|gb|EDW88201.1| GE12174 [Drosophila yakuba]
Length = 249
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
T L V NL GV +DDI ELF+E G +++ +H+D+ G G+A+++ R+DA +K+
Sbjct: 67 TFLMVCNLDYGVNDDDIMELFNESGLVQQGLVHYDREGNSLGTAQLMCKYRADAMKIIKQ 126
Query: 159 YNNVLLDGKPMKIEVV 174
++ V LDG+ +K+ ++
Sbjct: 127 FHGVFLDGRRLKLHLI 142
>gi|452984713|gb|EME84470.1| hypothetical protein MYCFIDRAFT_203037 [Pseudocercospora fijiensis
CIRAD86]
Length = 343
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 78 WQHDLFEDSL-----------RAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELK 126
W HD FED R G G+KL V N+H +T DD+RELF +G
Sbjct: 67 WVHDRFEDDRYDRRSRAPADDRYGGRDPESTGSKLRVDNIHYELTEDDLRELFERVGPTL 126
Query: 127 RYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
+ +D+ R G+A V+Y DA AL +++ +G+P++I ++ +
Sbjct: 127 SVRLLYDRQDRSQGTAYVIYEDERDARDALHKFDGQNANGQPIRISLMPS 176
>gi|427785941|gb|JAA58422.1| Putative polymerase delta-interacting protein 3 [Rhipicephalus
pulchellus]
Length = 352
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+G + V+NLHP VT DIR+LF IG + D G+A + R+SDA A
Sbjct: 271 LGCSVLVANLHPQVTESDIRDLFQYIGPMH------DARMVAVGTALATFHRQSDAMKAF 324
Query: 157 KRYNNVLLDGKPMKIEVV 174
K YN +LDG+PM + V+
Sbjct: 325 KAYNGRMLDGQPMNLTVL 342
>gi|409048571|gb|EKM58049.1| hypothetical protein PHACADRAFT_206888 [Phanerochaete carnosa
HHB-10118-sp]
Length = 234
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 97/234 (41%), Gaps = 47/234 (20%)
Query: 68 KSFRRTRNFP------WQHDLF-------EDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
K + R+ N P W HD + + A+ + TKL VSNLH VT D
Sbjct: 11 KPYSRSANRPRRSDGDWLHDKAPGVAPARQSAPTASTAADASPNTKLLVSNLHYEVTPKD 70
Query: 115 IRELFSEIGELKRYA-IHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
+ ++F IG L R I +D++GR +G A + Y ++A AL +YN L G+PM IE
Sbjct: 71 LTQVFGIIGTLVREPLIRYDRSGRSTGIAIISYETAAEAKQALAQYNGKLCKGQPMSIEF 130
Query: 174 VGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINR--GPGSQGRRGGLRRSS 231
+G R +R A + INR P R GG +
Sbjct: 131 --------------DSGPPPRARR----------ASAPSLINRIQKPNLLDRLGGSDSQA 166
Query: 232 QG-RGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
Q R G G R + G R R + K P KSA+ LD ELD +
Sbjct: 167 QDTRVSTNGTGPIRTK----RGDRDRKPAPREKKAKAQP--KSAEQLDMELDAF 214
>gi|342890180|gb|EGU89044.1| hypothetical protein FOXB_00456 [Fusarium oxysporum Fo5176]
Length = 317
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 30/185 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +D LD+II + + + R RG+GR R P R G + R
Sbjct: 1 MADKMDRGLDEIIADTRAN-----RPRNHRGQGRRREPRNDY--------PRDGVRKSVR 47
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEV---------GTKLYVSNLHPGVT 111
S R + W HD FE++ + G KL V N+H +T
Sbjct: 48 DDS--------RNLDSEWVHDRFEENNNRRAPAPRRRRESPDQESKGAKLRVDNIHYDLT 99
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
+D+ ELF IG + R + +D+ GR G+A V Y + DA A+K+++ +G+P+++
Sbjct: 100 EEDLDELFRRIGPVVRLQLRYDRAGRSEGTAYVTYELKEDAQEAVKQFDGANANGQPIRL 159
Query: 172 EVVGT 176
++ +
Sbjct: 160 TLLPS 164
>gi|258570675|ref|XP_002544141.1| hypothetical protein UREG_03658 [Uncinocarpus reesii 1704]
gi|237904411|gb|EEP78812.1| hypothetical protein UREG_03658 [Uncinocarpus reesii 1704]
Length = 1075
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 132/306 (43%), Gaps = 53/306 (17%)
Query: 18 KSERERGQGRARRGR---GRGRGPSGSVSGGRMTGAARRGPLSNARPSSYTIA------K 68
++ R+RG + G G+GRG G ++ +A+ SN S+ + +
Sbjct: 748 QTYRDRGNRSSHSGLPFLGKGRGFMG---ASCLSFSAKYSSRSNFDTSANLVLLLLIEQQ 804
Query: 69 SFRRTR---NFPWQHDLFEDS--LRAAGISGIEV---------------GTKLYVSNLHP 108
SFR R W HD FED R A G G KL V+NLH
Sbjct: 805 SFRNDRADVELDWVHDKFEDDRDTRPASFRGSNSRRNGRLSPPPEQSTSGAKLRVNNLHY 864
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
+T +D+ +LF+ IG + +I +D+ GR G A V Y R DA A++ ++ G+P
Sbjct: 865 DITENDLEDLFTRIGPILSRSILYDRAGRSEGIAFVTYKRLVDAQTAIREFDGANAKGQP 924
Query: 169 MKIEVVGTN----------AEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGP 218
+++ +V ++ AE P + ++ R + T ++ +GN + +++ P
Sbjct: 925 IRLTLVQSDRNTRRNPFDSAEKP---KGSLFDRAERPRDTRSLSPENGNGYRRSDVSKPP 981
Query: 219 GSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLD 278
R + S R GR RG RGR R RG+ K+ + LD
Sbjct: 982 PENIDRYIPGQRSPKRD-------GRSRGWRSVESRGRNDSR-RGRNTAGRPKKTQEQLD 1033
Query: 279 KELDNY 284
+E+D+Y
Sbjct: 1034 QEMDDY 1039
>gi|414588876|tpg|DAA39447.1| TPA: hypothetical protein ZEAMMB73_762792 [Zea mays]
Length = 127
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 27/143 (18%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M++ +DMSLDD+IK K R + SG AA P
Sbjct: 1 MSSGLDMSLDDLIKQSKS-----------RPKANPASSSGPARRAHPARAAPYPP----- 44
Query: 61 PSSYTIAKSFRRTRNFPW------QHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
+A R T + P+ + + A +E G KL++SNL GVT +D
Sbjct: 45 -----VAPKARATADSPYGVYSEQIAAIAAAAPLPAKARSLETGMKLHISNLDSGVTVED 99
Query: 115 IRELFSEIGELKRYAIHFDKNGR 137
++ELFSE+GELKRY++++DK+GR
Sbjct: 100 VQELFSEVGELKRYSMNYDKDGR 122
>gi|340520210|gb|EGR50447.1| predicted protein [Trichoderma reesei QM6a]
Length = 323
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 14/123 (11%)
Query: 66 IAKSFR---RTRNFPWQHDLFEDSL----------RAAGISGIEV-GTKLYVSNLHPGVT 111
+ KS R R + W HD +E++ R SG +V GT+L V N+H +T
Sbjct: 42 VKKSLRNEPRNLDSEWVHDRYEENTYRQRGPAPRRRRESPSGGDVRGTRLRVENIHYDLT 101
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
+D+ ELF IG + + + +D++GR G A V Y SDA A+++++ +G+P+++
Sbjct: 102 EEDLDELFRRIGPITKLQLRYDRSGRSEGVAFVTYESSSDAAEAVRQFDGANANGQPIRL 161
Query: 172 EVV 174
++
Sbjct: 162 TIL 164
>gi|295657714|ref|XP_002789423.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226283845|gb|EEH39411.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 333
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 19/130 (14%)
Query: 66 IAKSFRRTR---NFPWQHDLFED------SLR----------AAGISGIEVGTKLYVSNL 106
+ K FR R + W HD FED S+R + + G K+ V+NL
Sbjct: 35 VKKPFRTERANLDLDWVHDKFEDDRDTRPSIRGSRAPRLDRYSPEREQFQTGAKIRVTNL 94
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG 166
H +T DD+ +LF+ IG + ++ +D+ GR G A V Y R DA A++ ++ G
Sbjct: 95 HYDLTEDDLEDLFTRIGPISALSLLYDRAGRSEGVAFVTYKRLVDAQTAIREFDGANAKG 154
Query: 167 KPMKIEVVGT 176
+P+ + ++ +
Sbjct: 155 QPITLTLMSS 164
>gi|226286952|gb|EEH42465.1| RNA binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 333
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 19/130 (14%)
Query: 66 IAKSFRRTR---NFPWQHDLFED------SLR----------AAGISGIEVGTKLYVSNL 106
+ K FR R + W HD FED S+R + + G K+ V+NL
Sbjct: 35 VKKPFRTERANLDLDWVHDKFEDDRDTRPSIRGSRAPRLDRYSPEREQFQTGAKIRVTNL 94
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG 166
H +T DD+ +LF+ IG + ++ +D+ GR G A V Y R DA A++ ++ G
Sbjct: 95 HYDLTEDDLEDLFTRIGPISALSLLYDRAGRSEGVAFVTYKRLVDAQTAIREFDGANAKG 154
Query: 167 KPMKIEVVGT 176
+P+ + ++ +
Sbjct: 155 QPITLTLMSS 164
>gi|171687535|ref|XP_001908708.1| hypothetical protein [Podospora anserina S mat+]
gi|170943729|emb|CAP69381.1| unnamed protein product [Podospora anserina S mat+]
Length = 334
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 13/124 (10%)
Query: 66 IAKSFR----RTRNFPWQHDLFED--SLRAAG-------ISGIEVGTKLYVSNLHPGVTN 112
+ KSFR R + W HD +ED S R+A SG G+K+ V N+H +T
Sbjct: 64 VRKSFRDEAPRNLDTEWVHDRYEDHGSRRSAPRRRNSNEYSGDSRGSKVRVDNIHYELTQ 123
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
+++ LFS IG L + + +D+ GR G+A V Y DA A+K ++ G+P+++
Sbjct: 124 EELEGLFSSIGPLVKLEMKYDRAGRSEGTAFVTYQSSHDAAQAIKEFDGANAAGQPIRLT 183
Query: 173 VVGT 176
++ T
Sbjct: 184 MMPT 187
>gi|156382309|ref|XP_001632496.1| predicted protein [Nematostella vectensis]
gi|156219553|gb|EDO40433.1| predicted protein [Nematostella vectensis]
Length = 346
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 8/85 (9%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
+ T++ +SNLHP V+ DI ELF IG LK K R +G AEVVY + DA A
Sbjct: 218 QTSTRVTISNLHPAVSRQDIEELFGAIGVLKSC-----KMLR-AGMAEVVYTTKEDAVTA 271
Query: 156 LKRYNNVLLDGKPM--KIEVVGTNA 178
RY+N LDG+PM K+ V+ ++A
Sbjct: 272 YARYHNRNLDGQPMQCKLSVMPSSA 296
>gi|427785943|gb|JAA58423.1| Putative polymerase delta-interacting protein 3 [Rhipicephalus
pulchellus]
Length = 352
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G + V+NLHP VT DIR+LF IG + D G+A + R+SDA A K
Sbjct: 272 GCSVLVANLHPQVTESDIRDLFQYIGPMH------DARMVAVGTALATFHRQSDAMKAFK 325
Query: 158 RYNNVLLDGKPMKIEVV 174
YN +LDG+PM + V+
Sbjct: 326 AYNGRMLDGQPMNLTVL 342
>gi|412991324|emb|CCO16169.1| THO complex subunit 4 [Bathycoccus prasinos]
Length = 204
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
+LFS + LK+ ++++ NG+ GS EV++ R+DA AA++ Y+ + LDG+ +++E++ T
Sbjct: 20 DLFSTVARLKKSSLNYGPNGKSKGSGEVIFFNRADALAAMREYSGMKLDGRELQLEIIAT 79
Query: 177 N----AEIPLQARVN 187
+ A +P+QAR++
Sbjct: 80 SNVGLAPLPIQARLS 94
>gi|388858137|emb|CCF48205.1| related to YRA1-RNA annealing protein [Ustilago hordei]
Length = 235
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 98 GTKLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
G+K+ +SNL VT ++ELF + IG L++ A+ + NG+ +G V Y R DA A
Sbjct: 75 GSKIILSNLPLDVTEAQVKELFATTIGPLRKVAMSYRANGQSTGVCTVEYQRADDAARAY 134
Query: 157 KRYNNVLLDG-KPMKIEVV 174
+YNN L+DG KP+K+EVV
Sbjct: 135 TQYNNRLIDGKKPLKVEVV 153
>gi|409076986|gb|EKM77354.1| hypothetical protein AGABI1DRAFT_115275 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426195330|gb|EKV45260.1| hypothetical protein AGABI2DRAFT_194237 [Agaricus bisporus var.
bisporus H97]
Length = 227
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 35/175 (20%)
Query: 5 VDMSLDDIIKSRKKSE---RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP 61
+D LD II KK+ + R R R + G + + + R+TG A P N P
Sbjct: 1 MDKDLDSIISDTKKATIANKRRNPRRNVRTQVLGSPAATAATRPRVTGNAAAAPTKNTLP 60
Query: 62 SSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF-S 120
AG+ K+ VSNL V I+ELF S
Sbjct: 61 ----------------------------AGVP--PTADKIIVSNLPADVNEGQIKELFAS 90
Query: 121 EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK-PMKIEVV 174
+G K +++D +GR G A V ++++ DA A +Y+N L+DGK PMKIE+V
Sbjct: 91 TVGPTKEVHLNYDASGRSKGIAAVTFSKKGDANRAYTQYHNRLIDGKRPMKIEIV 145
>gi|340905027|gb|EGS17395.1| putative RNA binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 327
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 81/189 (42%), Gaps = 38/189 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D SLD+I+ RKK+ RG RG G+ R G
Sbjct: 1 MSNILDRSLDEILADRKKNNFNRG----------SRG--GASRRRERDDRPRDG------ 42
Query: 61 PSSYTIAKSFR----RTRNFPWQHDLFEDSL-----------RAAGISGIEVGTKLYVSN 105
+ KSFR R + W HD FED R+ + GTKL V N
Sbjct: 43 -----VRKSFRDDEPRNLDSEWVHDKFEDDSGRRPAASKGRRRSPEPNSDPRGTKLRVDN 97
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLD 165
LH +T D+ LFS IG + + +D+ GR G A V Y DA A+K ++
Sbjct: 98 LHYELTQQDLEGLFSRIGPVISVHLKYDRAGRSEGVAFVTYEHHRDAVQAIKEFDGANAA 157
Query: 166 GKPMKIEVV 174
G+P+++ ++
Sbjct: 158 GQPIRLTLL 166
>gi|392589278|gb|EIW78609.1| hypothetical protein CONPUDRAFT_108567 [Coniophora puteana
RWD-64-598 SS2]
Length = 239
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 96/209 (45%), Gaps = 25/209 (11%)
Query: 78 WQHD-LFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGEL-KRYAIHFDKN 135
W HD S AA +G E KL VSNLH +T ++ +F +IG L I +D++
Sbjct: 20 WSHDRAALSSGPAARTAGSEPSMKLIVSNLHYEITPKNLMSIFGQIGTLVCEPQIRYDRS 79
Query: 136 GRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRR 195
GR SG A V Y +A A ++ +L G+PM+I ++ + P RR
Sbjct: 80 GRSSGVAIVTYETIGEATRAKNQFQGLLAKGQPMEI---ASHVDAP------------RR 124
Query: 196 KRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRG 255
R+ M S A+ +NR + + R + + Q QG G R GGG
Sbjct: 125 TRSASMPGVST----ASLLNR----IEKPSLVDRLNPTDNKKQQQGAGPVRNARGGGRGP 176
Query: 256 RGRGRGRGQGKKNPVDKSADDLDKELDNY 284
RG G+ R K+A+DLDKELD +
Sbjct: 177 RGGGKTRAARPSKSKPKTAEDLDKELDVF 205
>gi|46949206|gb|AAT07459.1| cap-binding protein [Mirabilis jalapa]
Length = 147
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FE++L+ + T LY+ N+ T + + ELFS +GE+K+ +
Sbjct: 15 RDRRFPGNQEEFEEALKKS--------TTLYIGNMSFYTTEEQVYELFSRVGEIKKITMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G V+Y R D A+K + +LD +P++++
Sbjct: 67 LDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF 109
>gi|312383688|gb|EFR28676.1| hypothetical protein AND_03065 [Anopheles darlingi]
Length = 524
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 67/139 (48%), Gaps = 17/139 (12%)
Query: 36 RGPSGSVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGI 95
R P+ + S G P+ +P++Y + S+R H S AG +
Sbjct: 386 RAPNPNESMGIFAKMPPEEPIEQYKPATYVPSSSYR-------MHTPASASPPRAGTNEY 438
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
++ VSNLH VT DI+ELF +IG+L+ + RP G AEVVY DA A
Sbjct: 439 ----RIIVSNLHSTVTQQDIQELFEDIGDLQE-----SRLVRP-GVAEVVYRTLRDAEQA 488
Query: 156 LKRYNNVLLDGKPMKIEVV 174
+ Y+N LDG+PM +V
Sbjct: 489 VDAYHNRQLDGQPMTCLLV 507
>gi|358391435|gb|EHK40839.1| hypothetical protein TRIATDRAFT_28798 [Trichoderma atroviride IMI
206040]
Length = 326
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
Query: 67 AKSFRRTRNFPWQHDLFEDSL-----------RAAGISGIEVGTKLYVSNLHPGVTNDDI 115
++S R + W HD +E++ R + G GT+L V N+H +T +D+
Sbjct: 46 SRSEPRNLDSEWVHDRYEENTYRNSRAAPRRRRDSPSGGDARGTRLRVENIHYDLTEEDL 105
Query: 116 RELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
ELF IG + + + +D++GR G A V Y + DA A+K+++ +G+P+++ +
Sbjct: 106 DELFRRIGPISKLQLRYDRSGRSEGVAFVTYEDKEDAAEAIKQFDGANANGQPIRLTALS 165
Query: 176 T 176
+
Sbjct: 166 S 166
>gi|380096102|emb|CCC06149.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 335
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 66 IAKSFR----RTRNFPWQHDLFEDS--------LRAAGISGIEVGTKLYVSNLHPGVTND 113
+ KSFR R + W HD FE++ ++ +S G+K+ V N+H +T +
Sbjct: 53 VRKSFRDDAPRNLDSEWVHDKFEENDRRRAPRRRQSPELSSDPRGSKIRVDNIHYELTQE 112
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
D+ LFS IG L + + +D+ GR G+A V Y DA A++ Y+ G+P+++ +
Sbjct: 113 DLEGLFSRIGPLVKLDMKYDRAGRSEGTAFVTYESPQDASRAIREYDGANAAGQPIRLTL 172
Query: 174 VGT 176
+ +
Sbjct: 173 MPS 175
>gi|341878258|gb|EGT34193.1| hypothetical protein CAEBREN_06776 [Caenorhabditis brenneri]
Length = 235
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 38/190 (20%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
+L +SNL P V + D+R+LF++ +K +++F++ GR +G+ ++ ++R DA ++
Sbjct: 84 VRLNISNLAPSVLSKDLRQLFTDF-RVKNVSVNFNEQGRAAGTGDLTCSKR-DADRIIQS 141
Query: 159 YNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGP 218
+ V LD + MK ++ T+ + +RV R A A NR P
Sbjct: 142 FAGVALDNREMKFAIIDTSN---IASRVKFPAAPPR------------TAHRAPVPNRRP 186
Query: 219 GSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLD 278
G+ G+G G G+ G +G+ ++ V K+ ++LD
Sbjct: 187 A---------------------GKPAGKGAGKPAGKPAGTKKGKKPKREPQVKKTVEELD 225
Query: 279 KELDNYHAEA 288
ELD Y A A
Sbjct: 226 AELDAYMAHA 235
>gi|302916719|ref|XP_003052170.1| hypothetical protein NECHADRAFT_104111 [Nectria haematococca mpVI
77-13-4]
gi|256733109|gb|EEU46457.1| hypothetical protein NECHADRAFT_104111 [Nectria haematococca mpVI
77-13-4]
Length = 329
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 12/123 (9%)
Query: 66 IAKSFR-RTRNF--PWQHDLFEDS---------LRAAGISGIEVGTKLYVSNLHPGVTND 113
+ KSFR +RN W HD +E++ R G+KL V N+H +T D
Sbjct: 42 VRKSFRDESRNLDSEWVHDRYEENNSRRGPAPRRRRESPDQESKGSKLRVDNIHYDLTED 101
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
D+ ELF IG + R + +D+ GR G+A V Y + DA A+++++ +G+P+++ +
Sbjct: 102 DLDELFRRIGPVVRLQLRYDRAGRSEGTAYVTYELKEDAQEAVRQFDGANANGQPIRLTL 161
Query: 174 VGT 176
+ +
Sbjct: 162 LPS 164
>gi|443713100|gb|ELU06106.1| hypothetical protein CAPTEDRAFT_212702 [Capitella teleta]
Length = 458
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 9/110 (8%)
Query: 82 LFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGS 141
+ ++ + A S ++ G ++ ++NLH VT DDI ELF +G LK+ + KNG
Sbjct: 316 VVKNVMDADSFSPLQ-GYRVLITNLHGVVTQDDIVELFGSLGALKKARV--IKNG----V 368
Query: 142 AEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGV 191
AEV+Y R A AA+K+Y+ LDG+PM++ + T P + +V V V
Sbjct: 369 AEVIYVERHCALAAVKKYHMRELDGRPMQVNM--TTKATPKEQKVMVPPV 416
>gi|148682483|gb|EDL14430.1| mCG1026435 [Mus musculus]
Length = 115
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 21/134 (15%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
++M+L+DIIK K +R R + R RG G P +G R P
Sbjct: 1 MNMTLEDIIKLNKIQQRSRNRPDPRMNRGTG--PKRYRPAITHSGRNRLAP--------- 49
Query: 65 TIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEI 122
+RR + P WQHD F R G + ++ G KL +SNLH V++ DI++LF+E
Sbjct: 50 -----YRRPKQLPDKWQHDRFVGGFR--GGNHMDTGGKLLLSNLHYRVSDADIQKLFAEF 102
Query: 123 GELKRYAIHFDKNG 136
G L++ ++H+D++G
Sbjct: 103 GTLRK-SVHYDRSG 115
>gi|194861136|ref|XP_001969722.1| GG10249 [Drosophila erecta]
gi|190661589|gb|EDV58781.1| GG10249 [Drosophila erecta]
Length = 222
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 36/188 (19%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M + MSL+DIIK K R + QG R G R P+ S G + G R
Sbjct: 1 MLDKMQMSLEDIIKL-NKVHRAQKQGVQR---GSTRKPN---SKGGLKGILR-------- 45
Query: 61 P---SSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
P + Y F R E++LR + T L V NL+ + +DDI E
Sbjct: 46 PRNGTGYIHKAKFNR-----------ENALRPP-----KKHTFLMVCNLNYALNDDDIME 89
Query: 118 LFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT- 176
LF+E G +++ +H+D++G G+A+++ R+DA +++++ V +DG+ +KI ++
Sbjct: 90 LFNENGLVEKGFVHYDRDGNSLGTAQLMCRYRADAMMIIRQFHGVHVDGRRLKIHLIQKT 149
Query: 177 -NAEIPLQ 183
N + P+Q
Sbjct: 150 RNCKRPVQ 157
>gi|361068567|gb|AEW08595.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145480|gb|AFG54327.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145482|gb|AFG54328.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145484|gb|AFG54329.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145486|gb|AFG54330.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145488|gb|AFG54331.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145490|gb|AFG54332.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145492|gb|AFG54333.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145494|gb|AFG54334.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145496|gb|AFG54335.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145498|gb|AFG54336.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145500|gb|AFG54337.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145502|gb|AFG54338.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145504|gb|AFG54339.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145506|gb|AFG54340.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145508|gb|AFG54341.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145510|gb|AFG54342.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145512|gb|AFG54343.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
gi|383145514|gb|AFG54344.1| Pinus taeda anonymous locus CL689Contig1_04 genomic sequence
Length = 67
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 5/60 (8%)
Query: 145 VYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSG 204
V++R SDA AA++RYN V LDGKPMKIEVVGTN +P+ +TG + R R MT G
Sbjct: 1 VFSRNSDALAAMQRYNGVQLDGKPMKIEVVGTNLALPV-----LTGTSAGRGRGASMTGG 55
>gi|22859166|emb|CAD30681.1| RNA and export factor binding protein 2 [Drosophila melanogaster]
Length = 220
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 42/183 (22%)
Query: 1 MATHVDMSLDDIIKSRKKSER------ERGQG---RARRGRGRGRGPSGSVSGGRMTGAA 51
M+ + MSLDDIIK + + ER QG R R G RG S +G TG
Sbjct: 1 MSDKMKMSLDDIIKMKFNKNKFVNANNERVQGGSIRKRNSEGGLRGIQRSRNG---TGFI 57
Query: 52 RRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVT 111
R+ P + + T + V NL GV
Sbjct: 58 RKSKFKQETP------------------------------LKPPKKPTLVMVCNLDYGVD 87
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
+DDI ELF++ G +++ +H+D++G G+A + + R +AF +++++ V LDG+ +K+
Sbjct: 88 DDDIMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKL 147
Query: 172 EVV 174
+V
Sbjct: 148 HLV 150
>gi|400602903|gb|EJP70501.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 301
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GTK+ V NLH +T +DI ELF IG + R + FD+ GR G A V Y + DA A+K
Sbjct: 82 GTKIKVDNLHWDLTEEDIGELFRRIGRVVRLQLKFDRAGRSEGIAYVTYEHKEDANEAIK 141
Query: 158 RYNNVLLDGKPMKIEVV 174
+++ +G+P+++ ++
Sbjct: 142 QFDGANANGQPIRLTLL 158
>gi|405970774|gb|EKC35650.1| Polymerase delta-interacting protein 3 [Crassostrea gigas]
Length = 369
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 84 EDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAE 143
ED L VG ++ VSNLH V +DI ELF IG +KR + + G AE
Sbjct: 222 EDDLLTETQLASTVGFRVIVSNLHTVVVQNDIIELFGAIGPIKRARLLKE------GVAE 275
Query: 144 VVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
VVY + D A+++YNN LDG PM++++
Sbjct: 276 VVYLNKEDVQKAIQKYNNRELDGLPMQVKL 305
>gi|389747630|gb|EIM88808.1| hypothetical protein STEHIDRAFT_145663 [Stereum hirsutum FP-91666
SS1]
Length = 271
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 40/241 (16%)
Query: 68 KSFRRTRNFPWQHDLFEDS-----LRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEI 122
K+ R+ + W HDL ED+ A + + T+L VSN+H +T D+ +F +I
Sbjct: 9 KTVTRSTDDIWVHDLAEDAKTSRPTPTAPAAAVAANTRLAVSNVHYEITEKDLTAIFGQI 68
Query: 123 GELKRYA-IHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT----- 176
G L R I +D++GR +G A + + S+A A +++ VL G+P+ IE
Sbjct: 69 GTLVREPLIKYDRSGRSTGVAIIAFETASEAAKAKEQFQGVLAKGQPISIEYDTQGPPIR 128
Query: 177 ---NAEIP----------LQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGR 223
+A +P L AR+ + G GR K ++ G+ R
Sbjct: 129 RMRSATVPTGTPSGPKSSLMARMGLAGAGGREKAPLIARLGTAEKKA-----RDSAVVAA 183
Query: 224 RGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDN 283
RGG R+ Q RG +GRG G GRG + K P K+A +LD ELD
Sbjct: 184 RGG--RAPQAAARGGRRGRGAPGGVTAVAGRG-------PRESKKP--KTAQELDSELDA 232
Query: 284 Y 284
+
Sbjct: 233 F 233
>gi|449544466|gb|EMD35439.1| hypothetical protein CERSUDRAFT_116201 [Ceriporiopsis subvermispora
B]
Length = 243
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNG 136
W+ + + +A G S ++ G+K+ +S L V+ D+++ LF++ +G +K + ++ G
Sbjct: 32 WRVNQTAQAKKAVGSSAVDSGSKILLSRLPLDVSEDEVQVLFAKTVGPVKDVFLVYNSQG 91
Query: 137 RPSGSAEVVYARRSDAFAALKRYNNVLLDGK-PMKIEVV 174
R G A V + R +DA A RYN ++DGK P+KIE++
Sbjct: 92 RSKGMAVVTFQRSADATVARTRYNGKIVDGKRPIKIEII 130
>gi|154285798|ref|XP_001543694.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407335|gb|EDN02876.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 395
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 68 KSFRRTR---NFPWQHDLFED------SLR----------AAGISGIEVGTKLYVSNLHP 108
+ FR R + W HD FED S R + + G KL VSNLH
Sbjct: 103 QPFRTERANLDLDWVHDKFEDDRNTRPSYRDSRARRLDRYSPEPEQPQTGAKLRVSNLHY 162
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
+T DD+ +LF+ IG + ++ +D+ GR G A V Y R DA A++ ++ G+P
Sbjct: 163 DLTEDDLEDLFTRIGPISALSLRYDRAGRSEGIAFVTYKRLVDAQNAIREFDGANAKGQP 222
Query: 169 MKIEVVG 175
+ + ++
Sbjct: 223 ITLTMIS 229
>gi|225558206|gb|EEH06490.1| RNA binding domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 395
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 68 KSFRRTR---NFPWQHDLFED------SLR----------AAGISGIEVGTKLYVSNLHP 108
+ FR R + W HD FED S R + + G KL VSNLH
Sbjct: 103 QPFRTERANLDLDWVHDKFEDDRNTRPSYRDSRARRLDRYSPEPEQPQTGAKLRVSNLHY 162
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
+T DD+ +LF+ IG + ++ +D+ GR G A V Y R DA A++ ++ G+P
Sbjct: 163 DLTEDDLEDLFTRIGPISALSLRYDRAGRSEGIAFVTYKRLVDAQNAIREFDGANAKGQP 222
Query: 169 MKIEVVG 175
+ + ++
Sbjct: 223 ITLTMIS 229
>gi|119479649|ref|XP_001259853.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
gi|119408007|gb|EAW17956.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
Length = 353
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 140/366 (38%), Gaps = 139/366 (37%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRG-RGRGRGPSGSVSGGRMTGAARRGPLSNARPSS 63
+D SLD+II +ER + Q R RR +G+GR G
Sbjct: 1 MDRSLDEII-----AERPQKQNRGRRPPQGQGRRRDG----------------------- 32
Query: 64 YTIAKSFRRTR---NFPWQHDLFEDS----------------------LRAAGISGIEV- 97
+ KS+R R + W HD ++D R G+SG+++
Sbjct: 33 --VKKSYREERVDLDLDWVHDRYDDDRDSFFQHALLVVPDVHAVTVTPHRPIGMSGLDLL 90
Query: 98 -----------------GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSG 140
G K+ V NLH +T D+ +LF+ IG + ++ +D+ GR G
Sbjct: 91 LKHFVGVAANSCSSAPAGAKIRVENLHYDITESDLEDLFTRIGPVSNLSLVYDRAGRSEG 150
Query: 141 SAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT-----------NAEIP---LQARV 186
A V Y R +DA A+ ++ G+P+++ +V + N E P L R+
Sbjct: 151 VAYVTYNRANDARTAIAEFDGANAKGQPIRLTLVASGPGKRDRNPFDNVERPKGSLFDRI 210
Query: 187 NVTGVNGRRKRTVVMTSGSGNAGGAAAINRG------------------PGSQ------- 221
R + ++ GS N R P +
Sbjct: 211 E------RPRDARSLSPGSENGDADGGARRRRGRRPGGGAGHRRSDVSKPAPEHIDRYVP 264
Query: 222 GRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNP---VDKSADDLD 278
G+R +RRS+ GR +G+ R R RG+G++NP K+ ++LD
Sbjct: 265 GQRSPVRRSTNGRRQGE-----------------RRDDRNRGEGRRNPNARPKKTQEELD 307
Query: 279 KELDNY 284
+E+D+Y
Sbjct: 308 QEMDDY 313
>gi|367043980|ref|XP_003652370.1| hypothetical protein THITE_2113792 [Thielavia terrestris NRRL 8126]
gi|346999632|gb|AEO66034.1| hypothetical protein THITE_2113792 [Thielavia terrestris NRRL 8126]
Length = 293
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 13/124 (10%)
Query: 66 IAKSFR----RTRNFPWQHDLFED---------SLRAAGISGIEVGTKLYVSNLHPGVTN 112
+ K FR R + W HD FED + S G KL V N+H +T
Sbjct: 39 VRKPFRDDAPRDLDSEWVHDKFEDYGRRSAPRRRRHSPEPSSDSRGAKLRVDNIHYELTQ 98
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
+D+ LFS IG L + + +D+ GR G+A V Y DA A+K ++ G+P+++
Sbjct: 99 EDLEGLFSRIGPLIKLEMKYDRAGRSEGTAFVTYESHRDAAEAIKEFDGANAAGQPIRLT 158
Query: 173 VVGT 176
++ T
Sbjct: 159 LLPT 162
>gi|332027294|gb|EGI67378.1| Polymerase delta-interacting protein 3 [Acromyrmex echinatior]
Length = 446
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G ++ VSNL VT +DI+ELF ++GEL + RP G+AEV+Y DA A++
Sbjct: 332 GYRIVVSNLQANVTQEDIKELFEDVGEL-----LVSRLVRP-GTAEVIYKTLKDATKAVE 385
Query: 158 RYNNVLLDGKPMKIEVVG 175
Y+N LDG PMK +V
Sbjct: 386 TYHNRQLDGHPMKCLLVN 403
>gi|113204845|gb|ABI34156.1| IP02067p [Drosophila melanogaster]
Length = 220
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 42/183 (22%)
Query: 1 MATHVDMSLDDIIKSRKKSER------ERGQG---RARRGRGRGRGPSGSVSGGRMTGAA 51
M+ ++ MSLDDIIK + + ER QG R R G RG S +G TG
Sbjct: 1 MSDNMKMSLDDIIKMKFNKNKFVNAKNERVQGGSIRKRNSEGGLRGIQRSRNG---TGFI 57
Query: 52 RRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVT 111
R+ T+ K ++ T + V NL GV
Sbjct: 58 RKSKFKQE-----TLLKPPKKP-------------------------TLVMVCNLDYGVD 87
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
+DDI ELF++ G +++ +H+D++G G+A + + R +AF +++++ V LDG+ +K+
Sbjct: 88 DDDIMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKL 147
Query: 172 EVV 174
+V
Sbjct: 148 HLV 150
>gi|83772288|dbj|BAE62418.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 246
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
G KL + NLH +T D+ +LF+ IG + ++ +D+ GR G A V Y R SDA A+
Sbjct: 8 TGAKLRIENLHYDITESDLEDLFTRIGPISNLSLVYDRAGRSEGVAFVTYERPSDARTAI 67
Query: 157 KRYNNVLLDGKPMKIEVVGT 176
++ G+P+++ +V T
Sbjct: 68 SEFDGANAKGQPIRVTLVST 87
>gi|343424949|emb|CBQ68486.1| related to YRA1-RNA annealing protein [Sporisorium reilianum SRZ2]
Length = 241
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 98 GTKLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
G+K+ +SNL VT ++ELF + IG L++ A+ + NG+ +G V + R DA A
Sbjct: 79 GSKIILSNLPLDVTEAQVKELFATTIGALRKVAMSYRANGQSTGVCTVEFQRADDAGRAY 138
Query: 157 KRYNNVLLDG-KPMKIEVV 174
+YNN L+DG KP+K+EVV
Sbjct: 139 TQYNNRLIDGKKPLKVEVV 157
>gi|340729134|ref|XP_003402863.1| PREDICTED: hypothetical protein LOC100649607 [Bombus terrestris]
Length = 432
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G ++ VSNL VT +DI+ELF ++GEL + RP G+AEV+Y DA A++
Sbjct: 319 GYRIVVSNLQANVTQEDIKELFEDVGEL-----LVSRLVRP-GTAEVIYKTLKDATKAVE 372
Query: 158 RYNNVLLDGKPMKIEVVG 175
Y+N LDG PMK +V
Sbjct: 373 TYHNRQLDGHPMKCLLVN 390
>gi|449016405|dbj|BAM79807.1| unknown transcriptional coactivator [Cyanidioschyzon merolae strain
10D]
Length = 275
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+ VSNL P VT+ DI +LF+ +G I D+ G+ G A V YA A A+K+++
Sbjct: 41 VSVSNLAPSVTSQDIADLFNSVGPTITAFIRHDREGKSKGVATVKYADMETAERAVKQFH 100
Query: 161 NVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTS 203
++ LDG+P+ +++ + A A +N +G + + +R+ V S
Sbjct: 101 SLTLDGQPLVVQIESSGA----AAALNTSGAHPQTQRSAVPPS 139
>gi|388501070|gb|AFK38601.1| unknown [Lotus japonicus]
Length = 253
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP D FE +L A+ T +YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQDEFEQALLAS--------TTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G V+Y R D A K + +LD +P++++
Sbjct: 67 LDKNTKTPCGFCFVLYYSREDTEDACKYVSGTILDDRPIRVDF 109
>gi|350401581|ref|XP_003486197.1| PREDICTED: hypothetical protein LOC100746290 [Bombus impatiens]
Length = 427
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G ++ VSNL VT +DI+ELF ++GEL + RP G+AEV+Y DA A++
Sbjct: 314 GYRIVVSNLQANVTQEDIKELFEDVGEL-----LVSRLVRP-GTAEVIYKTLKDATKAVE 367
Query: 158 RYNNVLLDGKPMKIEVVG 175
Y+N LDG PMK +V
Sbjct: 368 TYHNRQLDGHPMKCLLVN 385
>gi|71019603|ref|XP_760032.1| hypothetical protein UM03885.1 [Ustilago maydis 521]
gi|46099825|gb|EAK85058.1| hypothetical protein UM03885.1 [Ustilago maydis 521]
Length = 307
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 98 GTKLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
G+K+ +SNL VT ++ELF + IG L++ A+ + G+ +G V + R DA A
Sbjct: 149 GSKIILSNLPLDVTEAQVKELFATTIGPLRKVAMSYRATGQSTGVCTVEFQRADDAGRAY 208
Query: 157 KRYNNVLLDG-KPMKIEVV 174
+YNN L+DG KP+K+EVV
Sbjct: 209 TQYNNRLIDGKKPLKVEVV 227
>gi|358377715|gb|EHK15398.1| hypothetical protein TRIVIDRAFT_38353 [Trichoderma virens Gv29-8]
Length = 324
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 14/125 (11%)
Query: 66 IAKSFR---RTRNFPWQHDLFEDSL----------RAAGISGIEV-GTKLYVSNLHPGVT 111
+ KS R R + W HD +E++ R SG E G +L V N+H +T
Sbjct: 43 VKKSLRNEPRNLDSEWVHDRYEENTYRNRGPAPRRRRESPSGGEARGARLRVENIHYDLT 102
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
+D+ ELF IG + + + +D++GR G A V Y + DA A+++++ +G+P+++
Sbjct: 103 EEDLDELFRRIGPITKLQLRYDRSGRSEGVAFVTYESKDDAAEAVRQFDGANANGQPIRL 162
Query: 172 EVVGT 176
V+ +
Sbjct: 163 TVMPS 167
>gi|24583933|ref|NP_609574.1| RNA and export factor binding protein 2, isoform A [Drosophila
melanogaster]
gi|386769548|ref|NP_001246007.1| RNA and export factor binding protein 2, isoform B [Drosophila
melanogaster]
gi|386769550|ref|NP_001246008.1| RNA and export factor binding protein 2, isoform C [Drosophila
melanogaster]
gi|7297959|gb|AAF53203.1| RNA and export factor binding protein 2, isoform A [Drosophila
melanogaster]
gi|383291465|gb|AFH03681.1| RNA and export factor binding protein 2, isoform B [Drosophila
melanogaster]
gi|383291466|gb|AFH03682.1| RNA and export factor binding protein 2, isoform C [Drosophila
melanogaster]
Length = 220
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 42/183 (22%)
Query: 1 MATHVDMSLDDIIKSRKKSER------ERGQG---RARRGRGRGRGPSGSVSGGRMTGAA 51
M+ + MSLDDIIK + + ER QG R R G RG S +G TG
Sbjct: 1 MSDKMKMSLDDIIKMKFNKNKFVNAKNERVQGGSIRKRNSEGGLRGIQRSRNG---TGFI 57
Query: 52 RRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVT 111
R+ T+ K ++ T + V NL GV
Sbjct: 58 RKSKFKQE-----TLLKPPKKP-------------------------TLVMVCNLDYGVD 87
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
+DDI ELF++ G +++ +H+D++G G+A + + R +AF +++++ V LDG+ +K+
Sbjct: 88 DDDIMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKL 147
Query: 172 EVV 174
+V
Sbjct: 148 HLV 150
>gi|296816745|ref|XP_002848709.1| RNA binding domain-containing protein [Arthroderma otae CBS 113480]
gi|238839162|gb|EEQ28824.1| RNA binding domain-containing protein [Arthroderma otae CBS 113480]
Length = 333
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G K+ V+N+H +T +D+ ELF+ IG + ++ +D+ GR G A V Y R SDA A++
Sbjct: 99 GAKIRVNNIHYDLTQEDLEELFTRIGPVHSVSLLYDRAGRSEGVAFVTYKRLSDAQTAIQ 158
Query: 158 RYNNVLLDGKPMKIEVVGTNA 178
++ G+P+++ +V A
Sbjct: 159 EFDGANAKGQPIRLSLVTNTA 179
>gi|307180222|gb|EFN68255.1| Polymerase delta-interacting protein 3 [Camponotus floridanus]
Length = 419
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G ++ VSNL VT +DI+ELF ++GEL + RP G+AEV+Y DA A++
Sbjct: 306 GYRIVVSNLQANVTQEDIKELFEDVGEL-----LVSRLVRP-GTAEVIYKTLKDATKAVE 359
Query: 158 RYNNVLLDGKPMKIEVVG 175
Y+N LDG PMK +V
Sbjct: 360 TYHNRQLDGHPMKCLLVN 377
>gi|170099594|ref|XP_001881015.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643694|gb|EDR07945.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 130
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 35/163 (21%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLDDII ++ K+ R RG R PS ++ G+ P+ AR ++
Sbjct: 1 MDKSLDDIISAKPKTGR----------RGAARRPSAR---AQVLGSTAVSPVQRARAANI 47
Query: 65 TIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSE-IG 123
+++ + + + TK+ VSNL V I+ELF+ +G
Sbjct: 48 AASRTAK---------------------AVVPASTKIIVSNLPVDVNETQIKELFTTTVG 86
Query: 124 ELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG 166
L+ +H+D GR G A V ++ + D A ++YNN L+DG
Sbjct: 87 PLRDVTLHYDAGGRSKGVASVQFSNKGDGEVAYQQYNNRLIDG 129
>gi|380013845|ref|XP_003690956.1| PREDICTED: uncharacterized protein LOC100869814 [Apis florea]
Length = 428
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G ++ VSNL VT +DI+ELF ++GEL + RP G+AEV+Y DA A++
Sbjct: 315 GYRIVVSNLQANVTQEDIKELFEDVGEL-----LVSRLVRP-GTAEVIYKTLKDATKAVE 368
Query: 158 RYNNVLLDGKPMKIEVVG 175
Y+N LDG PMK +V
Sbjct: 369 TYHNRQLDGHPMKCLLVN 386
>gi|347964752|ref|XP_001237182.3| AGAP000924-PA [Anopheles gambiae str. PEST]
gi|333466463|gb|EAU77553.3| AGAP000924-PA [Anopheles gambiae str. PEST]
Length = 498
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G ++ VSNLHP VT DI+ELF +IG+L + RP G AEV+Y DA A+
Sbjct: 407 GYRIVVSNLHPSVTQLDIKELFEDIGDLLE-----SRLVRP-GIAEVIYRNLKDAERAVD 460
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGV 191
Y+N LDG+PM +V A A T +
Sbjct: 461 AYHNRQLDGQPMNCLLVNPRATYKPTATTTSTAM 494
>gi|328790685|ref|XP_392259.4| PREDICTED: hypothetical protein LOC408724 [Apis mellifera]
Length = 427
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G ++ VSNL VT +DI+ELF ++GEL + RP G+AEV+Y DA A++
Sbjct: 314 GYRIVVSNLQANVTQEDIKELFEDVGEL-----LVSRLVRP-GTAEVIYKTLKDATKAVE 367
Query: 158 RYNNVLLDGKPMKIEVVG 175
Y+N LDG PMK +V
Sbjct: 368 TYHNRQLDGHPMKCLLVN 385
>gi|383858824|ref|XP_003704899.1| PREDICTED: uncharacterized protein LOC100876206 [Megachile
rotundata]
Length = 428
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G ++ VSNL VT +DI+ELF ++GEL + RP G+AEV+Y DA A++
Sbjct: 315 GYRIVVSNLQANVTQEDIKELFEDVGEL-----LVSRLVRP-GTAEVIYKTLKDATKAVE 368
Query: 158 RYNNVLLDGKPMKIEVVG 175
Y+N LDG PMK +V
Sbjct: 369 TYHNRQLDGHPMKCLLVN 386
>gi|353241355|emb|CCA73175.1| related to YRA1-RNA annealing protein [Piriformospora indica DSM
11827]
Length = 248
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
TK+ VSNL VT I+ELF + +G K + ++ G+ SG A V++ A A
Sbjct: 86 TSTKIIVSNLPQDVTEAQIKELFNTTVGPTKSCILQYNAQGKSSGHATVIFREAGSAQKA 145
Query: 156 LKRYNNVLLDGK-PMKIEVVGTNAEIPLQARV 186
+YNN L+DGK M+IE+V + PL RV
Sbjct: 146 FDQYNNRLIDGKRAMRIEIVVDPGKQPLVNRV 177
>gi|307211553|gb|EFN87631.1| Polymerase delta-interacting protein 3 [Harpegnathos saltator]
Length = 433
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G ++ VSNL VT +DI+ELF ++GEL + RP G+AEV+Y DA A++
Sbjct: 320 GYRIVVSNLQANVTQEDIKELFEDVGEL-----LVSRLVRP-GTAEVIYKTLKDATKAVE 373
Query: 158 RYNNVLLDGKPMKIEVVG 175
Y+N LDG PMK +V
Sbjct: 374 TYHNRQLDGHPMKCLLVN 391
>gi|201065923|gb|ACH92371.1| FI06768p [Drosophila melanogaster]
Length = 235
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 42/183 (22%)
Query: 1 MATHVDMSLDDIIKSRKKSER------ERGQG---RARRGRGRGRGPSGSVSGGRMTGAA 51
M+ + MSLDDIIK + + ER QG R R G RG S +G TG
Sbjct: 16 MSDKMKMSLDDIIKMKFNKNKFVNAKNERVQGGSIRKRNSEGGLRGIQRSRNG---TGFI 72
Query: 52 RRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVT 111
R+ T+ K ++ T + V NL GV
Sbjct: 73 RKSKFKQE-----TLLKPPKKP-------------------------TLVMVCNLDYGVD 102
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
+DDI ELF++ G +++ +H+D++G G+A + + R +AF +++++ V LDG+ +K+
Sbjct: 103 DDDIMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKL 162
Query: 172 EVV 174
+V
Sbjct: 163 HLV 165
>gi|325093985|gb|EGC47295.1| alpha-actinin [Ajellomyces capsulatus H88]
Length = 1058
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 27 RARRGRGRGRGPSGSVSGGRMTGAARRGP--LSNARPSSYTIAKS--FRRTR---NFPWQ 79
+A +G G + S S + A R P L + + +S I + FR R + W
Sbjct: 53 KAHLNQGLGTLKACSFS----SQAIRCWPHHLDDLQLTSLIILEQQPFRTERANLDLDWV 108
Query: 80 HDLFED------SLR----------AAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIG 123
HD FED S R + + G KL VSNLH +T DD+ +LF+ IG
Sbjct: 109 HDKFEDDRNTRPSYRDSRARRLDRYSPEPEQPQTGAKLRVSNLHYDLTEDDLEDLFTRIG 168
Query: 124 ELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
+ ++ +D+ GR G A V Y R DA A++ ++ G+P+ + ++
Sbjct: 169 PISALSLRYDRAGRSEGIAFVTYKRLVDAQNAIREFDGANAKGQPITLTMIS 220
>gi|240277162|gb|EER40671.1| alpha-actinin [Ajellomyces capsulatus H143]
Length = 1058
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 27 RARRGRGRGRGPSGSVSGGRMTGAARRGP--LSNARPSSYTIAKS--FRRTR---NFPWQ 79
+A +G G + S S + A R P L + + +S I + FR R + W
Sbjct: 53 KAHLNQGLGTLKACSFS----SQAIRCWPHHLDDLQLTSLIILEQQPFRTERANLDLDWV 108
Query: 80 HDLFED------SLR----------AAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIG 123
HD FED S R + + G KL VSNLH +T DD+ +LF+ IG
Sbjct: 109 HDKFEDDRNTRPSYRDSRARRLDRYSPEPEQPQTGAKLRVSNLHYDLTEDDLEDLFTRIG 168
Query: 124 ELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVG 175
+ ++ +D+ GR G A V Y R DA A++ ++ G+P+ + ++
Sbjct: 169 PISALSLRYDRAGRSEGIAFVTYKRLVDAQNAIREFDGANAKGQPITLTMIS 220
>gi|402222219|gb|EJU02286.1| hypothetical protein DACRYDRAFT_116014 [Dacryopinax sp. DJM-731
SS1]
Length = 226
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 16/118 (13%)
Query: 71 RRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYA- 129
RR+R P+ + ++ ++G T+L VS+LH VT ++ LFS +G L +
Sbjct: 17 RRSRGLPYARPTAQPAVTSSG------STRLLVSSLHYEVTEQELNTLFSSLGALAKPPR 70
Query: 130 IHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVN 187
I FD++GR +G A + Y R DA A +R+ DG+P K G N I +A +N
Sbjct: 71 IVFDRSGRSTGIAHITYERHEDALRAKQRF-----DGQPAK----GQNISIRFEAALN 119
>gi|299742555|ref|XP_001832567.2| hypothetical protein CC1G_03581 [Coprinopsis cinerea okayama7#130]
gi|298405237|gb|EAU89316.2| hypothetical protein CC1G_03581 [Coprinopsis cinerea okayama7#130]
Length = 266
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 28/136 (20%)
Query: 57 SNARPSSYTIAKSFRRTRNFP-----WQHDLFE---DSLRAAGISGIEV----------- 97
SNAR K + R N P W HD +E + + G++G V
Sbjct: 6 SNAR-------KPYSRPSNRPNTNERWTHDRYEGHQHNRKNQGLNGGNVAAPTAGAGAPG 58
Query: 98 -GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAI-HFDKNGRPSGSAEVVYARRSDAFAA 155
TKL VSNLH VT D+ +F +IG L R + +D++GR +G A V + ++A A
Sbjct: 59 QATKLKVSNLHYEVTPKDLNAIFGQIGTLVREPVLWYDESGRSTGQAIVTFETAAEATRA 118
Query: 156 LKRYNNVLLDGKPMKI 171
+ ++N +L G+PM I
Sbjct: 119 MNQFNGILAKGQPMSI 134
>gi|170053574|ref|XP_001862738.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874047|gb|EDS37430.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 431
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G ++ VSNLH VT +DIRELF +IG+L + RP G AEV+Y DA A+
Sbjct: 310 GHRIVVSNLHSSVTQNDIRELFEDIGDLLESRL-----VRP-GVAEVIYRTAKDAEEAVD 363
Query: 158 RYNNVLLDGKPMKIEVVGTNA 178
Y+N LDG PMK +V A
Sbjct: 364 TYHNRQLDGLPMKCLLVKPRA 384
>gi|308811130|ref|XP_003082873.1| THOC4_HUMAN THO complex subunit 4 (ISS) [Ostreococcus tauri]
gi|116054751|emb|CAL56828.1| THOC4_HUMAN THO complex subunit 4 (ISS) [Ostreococcus tauri]
Length = 276
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRG--------PSGSVSGGRMTGAAR 52
MA +D SLD +IK E + +AR+ + G R TGA
Sbjct: 1 MAAMLDQSLDAMIK-----ETRKATPKARKANAKKTGNKTPIGGKKKIGGLKNRSTGAT- 54
Query: 53 RGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISG---IEVG--TKLYVSNLH 107
P++ R+ + DS R G++G I VG TKL V NL
Sbjct: 55 --PMAMDIGGGVKKGGKNRKPMRSNAATAMAIDSARR-GVNGNARIAVGGKTKLMVGNLD 111
Query: 108 PGVTNDDIR------ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNN 161
V + DI+ ELFS++G + +++ NG+ G+AEV A A A+ YN
Sbjct: 112 FKVNDRDIKVSLGIAELFSQVGRVLSAGVNYGPNGKSKGTAEVTLATLDSAMKAVSTYNG 171
Query: 162 VLLDGKPMKIEVV 174
V LDG+P++I +V
Sbjct: 172 VKLDGRPLQIVIV 184
>gi|453082453|gb|EMF10500.1| hypothetical protein SEPMUDRAFT_127214 [Mycosphaerella populorum
SO2202]
Length = 345
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 78 WQHDLFE-------------DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGE 124
W HD FE D R A +GTKL + N+H +T +D+RELF +G
Sbjct: 71 WVHDRFEEDRYDRRGPRVPVDDDRYAPRGAPPIGTKLRIDNVHYELTEEDLRELFERVGP 130
Query: 125 LKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
+ +D++ R +G+A VVY DA A +Y+ +G+ +++ ++ +
Sbjct: 131 TISVRLLYDRSDRSTGTAFVVYEDERDARDAFDKYDGCPANGQAIRLTIMPS 182
>gi|296416645|ref|XP_002837985.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633880|emb|CAZ82176.1| unnamed protein product [Tuber melanosporum]
Length = 252
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEI-GELKRYAIHFDKNGRPSGSAEVVYARR 149
G SG +K+ VSNL V+ I+E F+++ G +KR I + NG G A V ++R
Sbjct: 66 GPSGKVTASKIIVSNLPFDVSEAMIKEYFTKVVGPIKRCVITYGPNGHSRGIATVEFSRS 125
Query: 150 SDAFAALKRYNNVLLDGKPMKIEVV 174
SDA A ++YN V +D +PMK+E+V
Sbjct: 126 SDAATAAQKYNGVEVDRRPMKVELV 150
>gi|224092924|ref|XP_002309756.1| predicted protein [Populus trichocarpa]
gi|118488601|gb|ABK96113.1| unknown [Populus trichocarpa]
gi|222852659|gb|EEE90206.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FE +L+ A T +Y+ N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGNQEEFEHALQTA--------TTVYIGNMSFYTTEEQVYELFSRAGEIKKIIMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G V+Y R D A+K + +LD +P++++
Sbjct: 67 LDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDF 109
>gi|270012978|gb|EFA09426.1| hypothetical protein TcasGA2_TC010637 [Tribolium castaneum]
Length = 401
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
+ G ++ VSNL VT DD++ELF +IG+L + RP G AEV+Y DA
Sbjct: 277 VPAGHRIVVSNLQSTVTQDDVKELFEDIGQLLAARL-----VRP-GVAEVIYKNLKDAQK 330
Query: 155 ALKRYNNVLLDGKPMKIEVVG 175
A+ Y+N LDG+PMK +V
Sbjct: 331 AVDTYHNRQLDGQPMKCLLVN 351
>gi|189241005|ref|XP_969371.2| PREDICTED: similar to CG6961 CG6961-PA [Tribolium castaneum]
Length = 404
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
+ G ++ VSNL VT DD++ELF +IG+L + RP G AEV+Y DA
Sbjct: 280 VPAGHRIVVSNLQSTVTQDDVKELFEDIGQLLAARL-----VRP-GVAEVIYKNLKDAQK 333
Query: 155 ALKRYNNVLLDGKPMKIEVVG 175
A+ Y+N LDG+PMK +V
Sbjct: 334 AVDTYHNRQLDGQPMKCLLVN 354
>gi|157120372|ref|XP_001653631.1| hypothetical protein AaeL_AAEL008938 [Aedes aegypti]
gi|108875012|gb|EAT39237.1| AAEL008938-PB [Aedes aegypti]
Length = 402
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G ++ VSNLH VT +DI+ELF +IG+L + RP G AEV+Y DA A+
Sbjct: 315 GYRIVVSNLHGSVTQNDIKELFEDIGDLLESRL-----VRP-GVAEVIYRTLKDAEEAVD 368
Query: 158 RYNNVLLDGKPMKIEVVGTNA 178
Y+N LDG+PMK +V A
Sbjct: 369 TYHNRQLDGQPMKCLLVKPRA 389
>gi|358374690|dbj|GAA91280.1| RNA binding protein [Aspergillus kawachii IFO 4308]
Length = 337
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 76 FPWQHDLFEDS----------------LRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+ W HD +ED + G KL V N+H +T D+ +LF
Sbjct: 50 YDWVHDKYEDDRDARPSRAPRRPRGDRYSPSPEHTASSGAKLRVENIHYDITETDLEDLF 109
Query: 120 SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
+ IG + ++ +D+ GR G A V Y+ SDA A++ ++ G+P+++ ++ T A
Sbjct: 110 TRIGPISNVSLVYDRAGRSEGVAFVTYSHISDARTAIREFDGANAKGQPIRLTLISTGA 168
>gi|157120370|ref|XP_001653630.1| hypothetical protein AaeL_AAEL008938 [Aedes aegypti]
gi|108875011|gb|EAT39236.1| AAEL008938-PA [Aedes aegypti]
Length = 441
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G ++ VSNLH VT +DI+ELF +IG+L + RP G AEV+Y DA A+
Sbjct: 315 GYRIVVSNLHGSVTQNDIKELFEDIGDLLESRL-----VRP-GVAEVIYRTLKDAEEAVD 368
Query: 158 RYNNVLLDGKPMKIEVVGTNA 178
Y+N LDG+PMK +V A
Sbjct: 369 TYHNRQLDGQPMKCLLVKPRA 389
>gi|196000464|ref|XP_002110100.1| hypothetical protein TRIADDRAFT_53717 [Trichoplax adhaerens]
gi|190588224|gb|EDV28266.1| hypothetical protein TRIADDRAFT_53717 [Trichoplax adhaerens]
Length = 318
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+ VSNL+ VT DDI+ELF IG L+ ++ + G AEVVY SDA A+ Y+
Sbjct: 241 VVVSNLYYTVTEDDIKELFGAIGRLRSARLNTN------GIAEVVYVNESDAIKAVSSYH 294
Query: 161 NVLLDGKPMKIEVV 174
N LDG PM ++V
Sbjct: 295 NRSLDGYPMHCKLV 308
>gi|425767145|gb|EKV05723.1| hypothetical protein PDIP_81630 [Penicillium digitatum Pd1]
gi|425780758|gb|EKV18758.1| hypothetical protein PDIG_07510 [Penicillium digitatum PHI26]
Length = 252
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 34/187 (18%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VS L V+ +++E F++ G ++R + +++NG G A + + R A A K
Sbjct: 65 SKILVSGLPSDVSEANVKEYFNKSAGPVRRVMLTYNQNGTSRGIASIQFNRADTAAKATK 124
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRG 217
N +L+DG+PMKIEVV + +P V +R
Sbjct: 125 ELNGLLVDGRPMKIEVVYDASHVP-----TVPASKPLTERV------------------A 161
Query: 218 PGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDL 277
+Q + ++ + + +G RG+ G R RGR GRG+ K+ ++L
Sbjct: 162 QKAQPKSAATPKTKENKNAATDKGSRRGK----GPARPRGRNAGRGK------PKTVEEL 211
Query: 278 DKELDNY 284
D E+ +Y
Sbjct: 212 DAEMIDY 218
>gi|302675763|ref|XP_003027565.1| hypothetical protein SCHCODRAFT_86069 [Schizophyllum commune H4-8]
gi|300101252|gb|EFI92662.1| hypothetical protein SCHCODRAFT_86069 [Schizophyllum commune H4-8]
Length = 210
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 88 RAAGISGIEVGTKLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVY 146
R A +S + K+ VSNL V ++ELF + +G L+ IH+D GR G A V +
Sbjct: 45 RPAAVST-QPSDKIIVSNLPLDVNEAAVKELFATTVGPLRSVMIHYDAGGRSKGIAVVNF 103
Query: 147 ARRSDAFAALKRYNNVLLDGK-PMKIEVV 174
R D A ++YNN L+DGK PMK+E+V
Sbjct: 104 QRSGDGNKAYQQYNNRLIDGKRPMKVEIV 132
>gi|226897447|gb|ACO90183.1| nuclear cap-binding protein 20 [Nicotiana tabacum]
Length = 171
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FED+L A T +YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEDALLKA--------TTVYVGNMSFYTTEEQVYELFSRAGEIKKIVMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G V++ R D ++K + +LD +P++++
Sbjct: 67 LDKNCKTPCGFCFVMFYSRDDTEDSVKYISGTILDDRPIRVDF 109
>gi|345485252|ref|XP_003425227.1| PREDICTED: hypothetical protein LOC100115530 isoform 2 [Nasonia
vitripennis]
Length = 425
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G ++ VSNL VT +DI+ELF ++GEL + RP G AEV+Y DA A++
Sbjct: 314 GYRIVVSNLQANVTQEDIKELFEDVGELL-----VSRLVRP-GIAEVIYKTLKDATKAVE 367
Query: 158 RYNNVLLDGKPMKIEVVG 175
Y+N LDG PMK +V
Sbjct: 368 TYHNRQLDGHPMKCLLVN 385
>gi|345485250|ref|XP_001600231.2| PREDICTED: hypothetical protein LOC100115530 isoform 1 [Nasonia
vitripennis]
Length = 442
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G ++ VSNL VT +DI+ELF ++GEL + RP G AEV+Y DA A++
Sbjct: 331 GYRIVVSNLQANVTQEDIKELFEDVGELL-----VSRLVRP-GIAEVIYKTLKDATKAVE 384
Query: 158 RYNNVLLDGKPMKIEVVG 175
Y+N LDG PMK +V
Sbjct: 385 TYHNRQLDGHPMKCLLVN 402
>gi|335310769|ref|XP_003362184.1| PREDICTED: THO complex subunit 4-like, partial [Sus scrofa]
Length = 224
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 14/99 (14%)
Query: 82 LFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELK-RYAIHFDKNGRPSG 140
+ + SL + +S +E+G L ++ H +G + + A+H+D++GR G
Sbjct: 69 VLQASLVPSALSPVELGPGLSLTYAH-------------ALGLVSGKAAVHYDRSGRSLG 115
Query: 141 SAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
+A+V + R++DA A+K+YN V LDG+PM I++V + +
Sbjct: 116 TADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQID 154
>gi|19112507|ref|NP_595715.1| RNA binding protein Mlo3 [Schizosaccharomyces pombe 972h-]
gi|2498564|sp|Q09330.1|MLO3_SCHPO RecName: Full=mRNA export protein mlo3; AltName: Full=RNA-annealing
protein mlo3
gi|1597736|gb|AAB41270.1| ORF [Schizosaccharomyces pombe]
gi|2326859|emb|CAB10980.1| RNA binding protein Mlo3 [Schizosaccharomyces pombe]
Length = 199
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 46/176 (26%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D SLD II S+ K G R+ R R P P NA+
Sbjct: 1 MSMELDQSLDAIIASKPK-------GGIRKRRARSNKPK---------------PTKNAK 38
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
P+ T + A S I +K+ VSNL VT ++ELF
Sbjct: 39 PAVNTAS----------------------ALKSVISEESKIIVSNLPTDVTEAQVKELFV 76
Query: 121 E-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG-KPMKIEVV 174
+ IG KR ++ + NGR G A ++++R DA A ++Y L+DG + MK+E++
Sbjct: 77 KSIGPCKRVSLAYGPNGRSKGIATIIFSRPGDATRAYEQYEGRLVDGTRKMKVEII 132
>gi|322707020|gb|EFY98599.1| RNA binding domain-containing protein [Metarhizium anisopliae ARSEF
23]
Length = 339
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 51/79 (64%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G+K+ V N+H +T +D+ ELF+ IG + + + +D+ GR G A V Y +R DA A+K
Sbjct: 118 GSKIRVENIHYDLTEEDLDELFARIGRVSKLNLRYDRAGRSEGVAYVTYEQREDAEEAIK 177
Query: 158 RYNNVLLDGKPMKIEVVGT 176
+++ +G+P+++ ++ +
Sbjct: 178 QFDGANANGQPIRLTLLPS 196
>gi|224460055|gb|ACN43578.1| nuclear cap-binding protein [Nicotiana tabacum]
gi|261866539|gb|ACY02034.1| cap binding protein 20 [Nicotiana tabacum]
Length = 254
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FED+L A T +YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEDALLKA--------TTVYVGNMSFYTTEEQVYELFSRAGEIKKIVMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G V++ R D ++K + +LD +P++++
Sbjct: 67 LDKNCKTPCGFCFVMFYSRDDTEDSVKYISGTILDDRPIRVDF 109
>gi|346322611|gb|EGX92210.1| RNA binding domain protein [Cordyceps militaris CM01]
Length = 285
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GT++ V N+H +T +D+ ELF IG + R + FD+ GR G A V Y R DA A+K
Sbjct: 65 GTRIKVHNVHYDLTEEDLGELFRRIGRVLRLQLKFDRAGRSEGIAFVTYEHRDDADEAVK 124
Query: 158 RYNNVLLDGKPMKIEVVGTNAEI--------PLQARVNVTG 190
+++ +G+P+++ ++ + PL R++ G
Sbjct: 125 QFDGANANGQPIRLTLLPSRNPFDTAVMPSRPLAERISAPG 165
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSA 142
FE S++ A + G LY+ NL G+T+D +RELFS G++ I D+NG GS
Sbjct: 390 FEQSMKDA--ADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSG 447
Query: 143 EVVYARRSDAFAALKRYNNVLLDGKPMKI 171
V ++ R +A AL N ++ GKP+ +
Sbjct: 448 FVSFSTREEASQALTEMNGKMISGKPLYV 476
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALK 157
T LYV +L VT+ + ELFS+ G++ + D N R S G A V Y+ DA A++
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAME 181
Query: 158 RYNNVLLDGKPMKI 171
N L+ KP+++
Sbjct: 182 ALNFAPLNNKPIRV 195
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+++ NL + N + + FS G + + D G+ G V Y + A +A+K N
Sbjct: 212 IFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLN 271
Query: 161 NVLLDGKPMKI 171
+L++ KP+ +
Sbjct: 272 GMLINDKPVYV 282
>gi|452842907|gb|EME44842.1| hypothetical protein DOTSEDRAFT_70785 [Dothistroma septosporum
NZE10]
Length = 337
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAF 153
G+ GTK+ V NLH +T +D+R+LF IG + +D+ R G+A V+Y DA
Sbjct: 95 GLPGGTKIRVDNLHYELTEEDLRDLFERIGPTTSVRLLYDRADRSLGTAYVIYEDPRDAR 154
Query: 154 AALKRYNNVLLDGKPMKIEVV----GTNAEIPLQARVN 187
A+ +N + +G+P++++++ G +PL R+
Sbjct: 155 QAVDDFNGQMANGQPIRLQLMPSGPGPRPPVPLIDRME 192
>gi|451798952|gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSA 142
FE S++ A + G LY+ NL G+T+D +RELFS G++ I D+NG GS
Sbjct: 191 FEQSMKDA--ADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSG 248
Query: 143 EVVYARRSDAFAALKRYNNVLLDGKPMKI 171
V ++ R +A AL N ++ GKP+ +
Sbjct: 249 FVSFSTREEASQALTEMNGKMISGKPLYV 277
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+++ NL + N + + FS G + + D G+ G V Y + A +A+K N
Sbjct: 13 IFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLN 72
Query: 161 NVLLDGKPMKI 171
+L++ KP+ +
Sbjct: 73 GMLINDKPVYV 83
>gi|212530514|ref|XP_002145414.1| RNA annealing protein Yra1, putative [Talaromyces marneffei ATCC
18224]
gi|210074812|gb|EEA28899.1| RNA annealing protein Yra1, putative [Talaromyces marneffei ATCC
18224]
Length = 249
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 29/175 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M++ +D SL+DI KSR++S R G R R G + P V G
Sbjct: 1 MSSKLDQSLEDISKSRRQSGR--GNNRRRSG-AKPTTPKTPVGG---------------- 41
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
I KS + RN P A G + +K+ VS L V+ I++ F
Sbjct: 42 -----IKKSTKPVRNSPRG----PAKGTAIGPTSPVHESKIIVSGLPHDVSEASIKDYFV 92
Query: 121 E-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
+ +G +KR + +++NG G A +V+ + A A K N L+DG+PMK+EVV
Sbjct: 93 KTVGPVKRVTVTYNQNGVSRGIASIVFNKPDTAAKAAKELNGTLVDGRPMKVEVV 147
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSA 142
FE S++ A + G LY+ NL G+T+D +RELFS G++ I D+NG GS
Sbjct: 390 FEQSMKDA--ADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSG 447
Query: 143 EVVYARRSDAFAALKRYNNVLLDGKPMKI 171
V ++ R +A AL N ++ GKP+ +
Sbjct: 448 FVSFSTREEASQALTEMNGKMISGKPLYV 476
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALK 157
T LYV +L VT+ + ELFS+ G++ + D N R S G A V Y+ DA A++
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAME 181
Query: 158 RYNNVLLDGKPMKI 171
N L+ KP+++
Sbjct: 182 ALNFAPLNNKPIRV 195
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+++ NL + N + + FS G + + D G+ G V Y + A +A+K N
Sbjct: 212 IFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLN 271
Query: 161 NVLLDGKPMKI 171
+L++ KP+ +
Sbjct: 272 GMLINDKPVYV 282
>gi|302852020|ref|XP_002957532.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
gi|300257174|gb|EFJ41426.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
Length = 386
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 65 TIAKSFRRTRNFPWQHDLFEDSLRAAGISG----IEVG-TKLYVSNLHPGVTNDDIRELF 119
+ KS +N W L AAG++G + VG KLYV+NL+ + D+++LF
Sbjct: 76 IMVKSSEHEKNLAWVSTYLASLLGAAGVTGPNDTLPVGPCKLYVANLNAAIAEADVQQLF 135
Query: 120 SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
+ G++ + D GR G V YA DA A++ +N ++ G +K+ V
Sbjct: 136 APFGQIDNVQLVRDATGRSQGYGYVTYANVLDATKAVEHWNGRVVAGSALKVSV 189
>gi|340515668|gb|EGR45921.1| predicted protein [Trichoderma reesei QM6a]
Length = 261
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 32/176 (18%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARR-GRGRGRGPSGSVSGGRMTGAARRGPLSNA 59
M+T +D LD+I+ +++++ R R GR P+G V + RG + A
Sbjct: 1 MSTKLDKPLDEIVTAQRRNSVRRRSLRRSTTGRPAATAPAGGVQ--KTAAKPSRGAAAKA 58
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
P L+AA SG +K+ VSNL VT I+E F
Sbjct: 59 TP-------------------------LKAAAPSG---ESKVIVSNLPKDVTEKQIKEYF 90
Query: 120 SE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
+ +G +K+ + + N + G A V +++ A AL+ N +L+DG+P+KIE++
Sbjct: 91 VQSVGPIKKVELSYGPNSQSRGIANVTFSKPDGASRALQTLNGLLVDGRPIKIEII 146
>gi|317149624|ref|XP_001823550.2| alpha-actinin, sarcomeric (f-actin cross linking protein)
[Aspergillus oryzae RIB40]
Length = 904
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
G KL + NLH +T D+ +LF+ IG + ++ +D+ GR G A V Y R SDA A+
Sbjct: 666 TGAKLRIENLHYDITESDLEDLFTRIGPISNLSLVYDRAGRSEGVAFVTYERPSDARTAI 725
Query: 157 KRYNNVLLDGKPMKIEVVGT 176
++ G+P+++ +V T
Sbjct: 726 SEFDGANAKGQPIRVTLVST 745
>gi|346975252|gb|EGY18704.1| hypothetical protein VDAG_08864 [Verticillium dahliae VdLs.17]
Length = 256
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 42/191 (21%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ V+NL V I+E F++ +G +K+ I + N G A V +++ A A
Sbjct: 71 SKIIVNNLPKDVNEQQIKEYFAQSVGSIKKVEISYGPNSVSRGIANVSFSKPDGASKAFN 130
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRG 217
+ N +L+DG+P+KIE+V G + A N
Sbjct: 131 KLNGLLVDGRPIKIEIV---------------------------------VGASQAANVI 157
Query: 218 PGSQGRRGGLRRSSQGRGRGQGQGRG----RGRGGGGGGGRGRGRGRGRGQGKKNPVDKS 273
P + + R+SQ + + + Q + + G GRG+ +G+ + P K+
Sbjct: 158 PPT---KTLAERTSQPKSQAKAQPKSAASNKHNAAKTAGAAGRGKKPRQGRTAR-PAKKT 213
Query: 274 ADDLDKELDNY 284
A++LD E+ +Y
Sbjct: 214 AEELDSEMADY 224
>gi|384248092|gb|EIE21577.1| cap-binding protein, partial [Coccomyxa subellipsoidea C-169]
Length = 145
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R F + FE LR + T LYV NL T + I E+FS G++KR +
Sbjct: 5 RDRRFVGTQEDFEKCLRES--------TTLYVGNLSFYTTEEQIYEVFSRAGDIKRIIMG 56
Query: 132 FDKNG-RPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN P G A VVY R DA A+K + ++D +P++++
Sbjct: 57 LDKNQLTPCGFAFVVYYTREDAEDAVKYISGTVMDDRPVRVDF 99
>gi|302412587|ref|XP_003004126.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261356702|gb|EEY19130.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 254
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 46/197 (23%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ V+NL V I+E F++ +G +K+ I + N G A V +++ A A
Sbjct: 71 SKIIVNNLPKDVNEQQIKEYFAQSVGSIKKVEISYGPNSVSRGIANVSFSKPDGASKAFN 130
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRG 217
+ N +L+DG+P+KIE+V G + A N
Sbjct: 131 KLNGLLVDGRPIKIEIV---------------------------------VGASQAANVI 157
Query: 218 PGSQGRRGGLRRSSQGRGRGQGQGRGRGRG------GGGGGGRGRGRGRGRGQGKKNPVD 271
P + + R+SQ + + + Q + G GRG+ +GR P
Sbjct: 158 PPT---KTLAERTSQPKSQAKAQPKSAASNKHNAAKTAGAAGRGKKPRQGR---TARPAK 211
Query: 272 KSADDLDKELDNYHAEA 288
K+A++LD E+ +Y A
Sbjct: 212 KTAEELDSEMADYFEAA 228
>gi|255953255|ref|XP_002567380.1| Pc21g03160 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589091|emb|CAP95213.1| Pc21g03160 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 251
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 35/187 (18%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VS L V+ +++E FS+ G ++R + +++NG G A + + R A A K
Sbjct: 65 SKILVSGLPSDVSEANVKEYFSKSAGPVRRVMLTYNQNGTSRGIASIQFTRADTAAKATK 124
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRG 217
N +L+DG+PMKIEV+ + +P + A
Sbjct: 125 ELNGLLVDGRPMKIEVIYDASHVP-----------------------AAPAPKPLTERIA 161
Query: 218 PGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDL 277
+Q + ++ + +G RG+ G R RGR GRG+ K+ ++L
Sbjct: 162 QKAQPKSAAAPKAKDDKKTATDKGSRRGK-----GPRPRGRNAGRGKP------KTVEEL 210
Query: 278 DKELDNY 284
D E+ +Y
Sbjct: 211 DAEMVDY 217
>gi|395325535|gb|EJF57956.1| hypothetical protein DICSQDRAFT_91511 [Dichomitus squalens LYAD-421
SS1]
Length = 253
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 9/102 (8%)
Query: 78 WQHD-------LFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYA- 129
W HD +++ A +G+ T++ VSNLH VT D+ ++F +IG L R
Sbjct: 29 WLHDRAPGVPRAVQNTASAKATNGV-TNTRIIVSNLHYEVTPKDLSQIFGQIGTLVREPQ 87
Query: 130 IHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
I +D++GR SG A + + ++A A K+++ +L +PM I
Sbjct: 88 IRYDRSGRSSGVAVITFETPAEATRAKKQFDGILAKNQPMSI 129
>gi|317150977|ref|XP_003190476.1| RNA binding domain protein [Aspergillus oryzae RIB40]
Length = 261
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VS L V +I+E FS+ G +KR + +++NG G A +V+++ A A K
Sbjct: 64 SKIMVSGLPSDVNEANIKEYFSKSAGPVKRVMLTYNQNGTSRGIASIVFSKPDTAAKAAK 123
Query: 158 RYNNVLLDGKPMKIEVV 174
N +L+DG+PMKIEVV
Sbjct: 124 DLNGLLVDGRPMKIEVV 140
>gi|242818497|ref|XP_002487129.1| RNA annealing protein Yra1, putative [Talaromyces stipitatus ATCC
10500]
gi|218713594|gb|EED13018.1| RNA annealing protein Yra1, putative [Talaromyces stipitatus ATCC
10500]
Length = 246
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M++ +D SL+DI KSR+++ RG R R + V G + +GP
Sbjct: 1 MSSKLDQSLEDISKSRRQA---RGNNRRRSSTAKATTTKAPVGGIKKNTKPAKGPA---- 53
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
R P A G + +K+ VS L V+ I++ F
Sbjct: 54 ----------RGPVKGP-----------AIGPTSPVNESKIIVSGLPHDVSEASIKDYFV 92
Query: 121 E-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
+ +G +KR + +++NG G A +V+++ A A K N L+DG+PMK+EVV
Sbjct: 93 KTVGPVKRVTVTYNQNGVSRGIASIVFSKPDTAAKAAKELNGTLVDGRPMKVEVV 147
>gi|134058021|emb|CAK38250.1| unnamed protein product [Aspergillus niger]
Length = 333
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 18/122 (14%)
Query: 75 NFPWQHDLFED------------------SLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ W HD +ED S S G KL V N+H +T D+
Sbjct: 44 DLDWVHDKYEDDRDARPSRAPRRPRGDRYSPSPEQHSTASSGAKLRVENIHYDITETDLE 103
Query: 117 ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
+LF+ IG + ++ +D+ GR G A V Y DA A++ ++ G+P+++ ++ T
Sbjct: 104 DLFTRIGPISNVSLVYDRAGRSEGVAFVTYTHIGDARTAIREFDGANAKGQPIRLTLIST 163
Query: 177 NA 178
A
Sbjct: 164 GA 165
>gi|224133438|ref|XP_002328042.1| predicted protein [Populus trichocarpa]
gi|222837451|gb|EEE75830.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FE +L+ + T +Y+ N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGNQEEFEQALQTS--------TTVYIGNMSFYSTEEQVYELFSRAGEIKKIIMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G V+Y R D A+K + +LD +P++++
Sbjct: 67 LDKNSKTPCGFCFVLYYSREDTEDAVKFMSGTILDDRPIRVDF 109
>gi|145249628|ref|XP_001401153.1| RNA binding domain protein [Aspergillus niger CBS 513.88]
gi|134081836|emb|CAK42091.1| unnamed protein product [Aspergillus niger]
gi|350639577|gb|EHA27931.1| hypothetical protein ASPNIDRAFT_41873 [Aspergillus niger ATCC 1015]
Length = 251
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAF 153
+ +K+ VS L V +I+E F++ G +KR + +++NG G A +V+++ A
Sbjct: 62 VSTESKIMVSGLPSDVNEANIKEYFTKSAGPVKRVMLTYNQNGTSRGIASIVFSKPDTAA 121
Query: 154 AALKRYNNVLLDGKPMKIEVV 174
A K N +L+DG+PMKIEVV
Sbjct: 122 KAAKDLNGLLVDGRPMKIEVV 142
>gi|238500285|ref|XP_002381377.1| RNA annealing protein Yra1, putative [Aspergillus flavus NRRL3357]
gi|220693130|gb|EED49476.1| RNA annealing protein Yra1, putative [Aspergillus flavus NRRL3357]
Length = 247
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VS L V +I+E FS+ G +KR + +++NG G A +V+++ A A K
Sbjct: 64 SKIMVSGLPSDVNEANIKEYFSKSAGPVKRVMLTYNQNGTSRGIASIVFSKPDTAAKAAK 123
Query: 158 RYNNVLLDGKPMKIEVV 174
N +L+DG+PMKIEVV
Sbjct: 124 DLNGLLVDGRPMKIEVV 140
>gi|389626725|ref|XP_003711016.1| hypothetical protein MGG_04399 [Magnaporthe oryzae 70-15]
gi|351650545|gb|EHA58404.1| hypothetical protein MGG_04399 [Magnaporthe oryzae 70-15]
Length = 332
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 66 IAKSFR--RTRNF--PWQHDLFEDSLRAAGI-------------SGIEVGTKLYVSNLHP 108
+ KS+R ++RN W HD ++D+ G G GTK+ V N+H
Sbjct: 53 VRKSYRDDQSRNLDSEWVHDRYDDNDSRRGGRYSRRRDDDLDKEQGSSRGTKIRVENIHY 112
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
+T +D++ LFS IG + + +D++GR G A V Y DA A+K ++ G+P
Sbjct: 113 ELTEEDLQGLFSRIGPIISLELLYDRSGRSEGVAYVTYESHKDATLAVKDFDGANAAGQP 172
Query: 169 MKIEVV 174
+++ ++
Sbjct: 173 IRLSII 178
>gi|242793052|ref|XP_002482084.1| RNA binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218718672|gb|EED18092.1| RNA binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 330
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 41/184 (22%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SL++II R + + RRGRG G + A R G
Sbjct: 1 MDRSLEEIISERP------AKQQNRRGRGSGNN----------SNAPRDG---------- 34
Query: 65 TIAKSFRRTRNFP--WQHDLFED------------SLRAAGISGIEVGTKLYVSNLHPGV 110
+ KS+R + W HD F+D S R + +L + NLH +
Sbjct: 35 -VKKSYRDRVDLDRDWVHDRFDDIGDSRSSRRDNRSRRDRESPDSDQPARLRIDNLHWDL 93
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMK 170
T D+ LFS+IG ++R I+FD+ GR G+A V Y DA A++ ++ G+P++
Sbjct: 94 TEADLEGLFSKIGPVQRVRINFDRAGRSEGTATVTYQYVEDARQAIREFDGANARGQPIR 153
Query: 171 IEVV 174
+ ++
Sbjct: 154 LTLL 157
>gi|380487764|emb|CCF37827.1| RNA binding protein [Colletotrichum higginsianum]
Length = 343
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 13/123 (10%)
Query: 65 TIAKSFR---RTRNFPWQHDLFEDSLRAAGISGIEV----------GTKLYVSNLHPGVT 111
++ KSFR R + W HD FE+ G + K+ V N+H +T
Sbjct: 52 SVRKSFRDEPRNLDSEWVHDRFEEHDTRRGPAPRRRRDEPEQRDFNSAKIRVENIHYELT 111
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
+D+ ELF+ IG + + + +D+ GR G A V R DA A+K ++ +G+P+++
Sbjct: 112 PEDLEELFNRIGPVAKLDLKYDRAGRSEGIAFVTMESREDALEAVKEFDGANANGQPIRL 171
Query: 172 EVV 174
++
Sbjct: 172 SIM 174
>gi|358374112|dbj|GAA90706.1| RNA annealing protein Yra1 [Aspergillus kawachii IFO 4308]
Length = 250
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAF 153
+ +K+ VS L V +I+E F++ G +KR + +++NG G A +V+++ A
Sbjct: 61 VSTESKIMVSGLPSDVNEANIKEYFTKSAGPVKRVMLTYNQNGTSRGIASIVFSKPDTAA 120
Query: 154 AALKRYNNVLLDGKPMKIEVV 174
A K N +L+DG+PMKIEVV
Sbjct: 121 KAAKDLNGLLVDGRPMKIEVV 141
>gi|219944397|gb|ACL54980.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|219944399|gb|ACL54981.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|224460063|gb|ACN43582.1| nuclear cap-binding protein [Solanum tuberosum]
gi|262065509|gb|ACY07775.1| CBP20 protein [Solanum tuberosum]
Length = 255
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FED+L + I V YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEDAL----LRSITV----YVGNMSFYTTEEQVYELFSRAGEIKKIVMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G ++Y R DA ++K + +LD +P++++
Sbjct: 67 LDKNSKTPCGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDF 109
>gi|119477755|ref|XP_001259289.1| RNA annealing protein Yra1, putative [Neosartorya fischeri NRRL
181]
gi|119407443|gb|EAW17392.1| RNA annealing protein Yra1, putative [Neosartorya fischeri NRRL
181]
Length = 275
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VS L V +I+E FS+ G +KR + +++NG G A +V+++ A A K
Sbjct: 66 SKIMVSGLPSDVNEANIKEYFSKSAGPVKRVMLTYNQNGTSRGIASIVFSKPDTAAKAAK 125
Query: 158 RYNNVLLDGKPMKIEVV 174
N +L+DG+PMKIEVV
Sbjct: 126 ELNGLLVDGRPMKIEVV 142
>gi|390599056|gb|EIN08453.1| hypothetical protein PUNSTDRAFT_144039 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 227
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 37/199 (18%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
++G+K+ +S L V ++IRELF + +G LK I ++ +G +G A V + R DA
Sbjct: 45 KLGSKILLSYLPKDVQEEEIRELFINTVGPLKDVLIVYNSHGVSNGMAVVTFQRHGDAGK 104
Query: 155 ALKRYNNVLLDGK-PMKIEVV-----GTNA-EIPLQARVNVTGVNGRRKRTVVMTSGSGN 207
A +YN ++DGK P+KIE++ GT A PLQ + + G G
Sbjct: 105 ARDKYNGKIVDGKNPIKIEIIVDGTPGTLATPTPLQPSL------------LSRLGGPGP 152
Query: 208 AGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKK 267
A + R P L+ Q R G GR R +G +
Sbjct: 153 APRSPTTPRNPLMTAVPPSLKPKQQ------------LRTPIGPAGRRRHLKKGAKR--- 197
Query: 268 NPVDKSADDLDKELDNYHA 286
V K+A LD+++D+Y A
Sbjct: 198 --VKKTAAQLDQDMDDYRA 214
>gi|224460059|gb|ACN43580.1| nuclear cap-binding protein [Solanum tuberosum]
Length = 255
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FED+L + I V YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEDAL----LRSITV----YVGNMSFYTTEEQVYELFSRAGEIKKIVMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G ++Y R DA ++K + +LD +P++++
Sbjct: 67 LDKNSKTPCGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDF 109
>gi|219944401|gb|ACL54982.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|219944403|gb|ACL54983.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|224460057|gb|ACN43579.1| nuclear cap-binding protein [Solanum tuberosum]
Length = 255
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FED+L + I V YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEDAL----LRSITV----YVGNMSFYTTEEQVYELFSRAGEIKKIVMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G ++Y R DA ++K + +LD +P++++
Sbjct: 67 LDKNSKTPCGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDF 109
>gi|255949546|ref|XP_002565540.1| Pc22g16240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592557|emb|CAP98912.1| Pc22g16240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 317
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNV 162
V NLH +T D+ +LF IG + + +D+ GR G A V YAR DA +++ Y+
Sbjct: 90 VDNLHYDITETDLEDLFGRIGPVSELTVSYDRAGRSEGVAFVTYARLKDAHTSIQEYDGA 149
Query: 163 LLDGKPMKIEVVG 175
G+P+++ +VG
Sbjct: 150 NAKGQPIRLSLVG 162
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSA 142
FE SL+ A + G LY+ NL + +D +RELFS G++ Y + D+NG GS
Sbjct: 314 FEQSLKDA--ADKYQGLNLYLKNLDDSIGDDQLRELFSNFGKITSYKVMRDQNGLSKGSG 371
Query: 143 EVVYARRSDAFAALKRYNNVLLDGKPMKI 171
V ++ R +A AL N ++ GKP+ +
Sbjct: 372 FVAFSTREEASQALTEMNGKMISGKPLYV 400
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALK 157
T LYV +L V++ + ELFS+ G++ + D R S G A V ++ DA AL+
Sbjct: 46 TSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARALE 105
Query: 158 RYNNVLLDGKPMKI 171
N +L+ KP+++
Sbjct: 106 VLNFAVLNNKPIRV 119
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+++ NL + N + E FS G + + D+ G+ G V Y + A A+K N
Sbjct: 136 IFIKNLDKTIDNKTLHETFSSFGTILSCKVAMDEAGQSKGFGFVQYEKEEAAQNAIKSLN 195
Query: 161 NVLLDGKPMKI 171
+L++ KP+ +
Sbjct: 196 GMLINDKPVFV 206
>gi|392562059|gb|EIW55240.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 251
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 9/195 (4%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFS-EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
G+K+ +S L V +++ LF+ +G +K + ++ G G A V +AR +DA A
Sbjct: 44 GSKILLSRLPLDVEENEVETLFTRTVGPVKEVLMVYNSQGNSRGMAVVTFARAADASVAR 103
Query: 157 KRYNNVLLDG-KPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAI- 214
+YN ++DG +P++IE+V + E+ TG +R G AAA
Sbjct: 104 GKYNGKIVDGRRPIRIEIVIDDEEVHRIPPPPATGAPSLLERL-----GPPKVFQAAAQP 158
Query: 215 -NRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKS 273
R + G+ + Q G +G+ G R + R K+ P K+
Sbjct: 159 HPRQHIALGKGAPQQPQQQQPPPPTGPHNVKGKLRAKKGPRRLNKQRQAQPAKQPPKKKT 218
Query: 274 ADDLDKELDNYHAEA 288
A++LDKE+++Y A A
Sbjct: 219 AEELDKEMEDYKARA 233
>gi|168472717|gb|ACA24134.1| cap-binding protein CBP20 [Lolium temulentum]
Length = 231
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 69 SFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
S R R FP + FE +L A+ +YV N+ T + ELFS GE+K+
Sbjct: 12 SVYRDRRFPGTQEEFEAALLAS--------LTVYVGNMSFYSTEEQAYELFSRAGEIKKI 63
Query: 129 AIHFDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
+ DKN R P G V+Y R DA A+K + +LD +P++++
Sbjct: 64 IMGLDKNTRTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDF 109
>gi|212535436|ref|XP_002147874.1| RNA binding protein, putative [Talaromyces marneffei ATCC 18224]
gi|210070273|gb|EEA24363.1| RNA binding protein, putative [Talaromyces marneffei ATCC 18224]
Length = 329
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 66 IAKSFRRTRNFP--WQHDLFEDS------------LRAAGISGIEVGTKLYVSNLHPGVT 111
+ KS+R + W HD FED+ R + +L + NLH +T
Sbjct: 32 VKKSYRDRVDLDRDWVHDRFEDTGDSRSSRRDNRSRRERESPDSDQPARLRIENLHWDLT 91
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
+D+ LF IG ++R I+FD+ GR G+A V Y DA A++ ++ G+P+++
Sbjct: 92 EEDLEGLFGNIGPVQRVRINFDRAGRSEGTATVTYQYLEDAKQAIREFDGANAKGQPIRL 151
Query: 172 EVV 174
++
Sbjct: 152 TLL 154
>gi|308477155|ref|XP_003100792.1| hypothetical protein CRE_15496 [Caenorhabditis remanei]
gi|308264604|gb|EFP08557.1| hypothetical protein CRE_15496 [Caenorhabditis remanei]
Length = 318
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 132/295 (44%), Gaps = 69/295 (23%)
Query: 2 ATHVDMSLDDII-KSRK--KSERERGQGRARRGRGRGRGP---SGSVSGGRMTGAARRGP 55
A +VDMSLDDII K+RK S ++ G ARRG GR G SG SGG
Sbjct: 81 ANNVDMSLDDIISKTRKTNNSIHKKPLGGARRGTGRPTGLPRRSGGSSGG---------- 130
Query: 56 LSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLY---VSNLHPGVTN 112
W+ DL D++ GI+ +K+ +SNL P V +
Sbjct: 131 ----------------------WR-DL--DAVSNHGITSRGNDSKVIRVNISNLAPTVIS 165
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
D+ ELF + +L +++F+++G G+ ++ +R DA +++++ V LDGK MK
Sbjct: 166 SDLEELFGDY-KLHSVSVNFNEHGESLGTGDISLTKR-DADRLVQKFSGVALDGKMMKFA 223
Query: 173 VVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQ 232
V+ ++ + RV+ G + R+ +SG G G NR P R G
Sbjct: 224 VIDSSN---IAGRVDF----GNKSRSAPASSGRGFQSGPRRFNRKPEDFLRDG------- 269
Query: 233 GRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYHAE 287
+G + RGG GG +G G K K+ +LD EL+ Y A+
Sbjct: 270 ---VHEGDTK---RGGSSRGGFRKGGRGGDRDSKPK---KTEAELDAELEAYMAK 315
>gi|168016155|ref|XP_001760615.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688312|gb|EDQ74690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALKRY 159
+YVSNL +TN+D+ +FS G++ + I DK R S G A ++YA R DA AA+K
Sbjct: 21 VYVSNLDFSLTNNDLHTIFSTFGKIGKVTIVKDKQTRESKGVAFILYASRDDAHAAVKTM 80
Query: 160 NNVLLDGKPMKIEVVGTN 177
N +L+ + +K+ + N
Sbjct: 81 NGKILNKRTLKVSIAEDN 98
>gi|402076162|gb|EJT71585.1| hypothetical protein GGTG_10840 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 260
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 33/183 (18%)
Query: 2 ATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS-NAR 60
A +D SLD+I+ +++++ R ARR +GGR AA G + NAR
Sbjct: 3 ANKLDKSLDEILSNQRRTS-SRKVSSARRS-----------TGGRPATAAPVGGIQKNAR 50
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF- 119
P+ AK A G S K+ VSN+ VT I+E F
Sbjct: 51 PNRNAAAKPAP------------SKPTSAPGTS------KIVVSNMPKDVTEAHIKEYFG 92
Query: 120 SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA- 178
IG +K+ I + G G A +++A+ A A + N +L+D +P+K+EVV + A
Sbjct: 93 KSIGTVKKVEISYGPGGVSRGIATIIFAQADAASKAFQELNGILIDQRPIKVEVVVSTAD 152
Query: 179 EIP 181
+IP
Sbjct: 153 QIP 155
>gi|426195373|gb|EKV45303.1| hypothetical protein AGABI2DRAFT_194268 [Agaricus bisporus var.
bisporus H97]
Length = 243
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYA-IHFDKNGRPSGSAEVVYARRSDAFAALKR 158
K+ VSNLH +T D+ +F +IG L R I +D++GR SG A V + ++A A K+
Sbjct: 56 KILVSNLHYEITPKDLNVIFGQIGTLIREPLIRYDRSGRSSGQAIVSFETVAEAVRAKKQ 115
Query: 159 YNNVLLDGKPMKIEVVG 175
+N +L G+PM ++ +
Sbjct: 116 FNGILAKGQPMTVDFLA 132
>gi|220936494|gb|ACL83596.1| CBP20 [Hordeum vulgare]
gi|326508016|dbj|BAJ86751.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 241
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 69 SFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
S R R FP + FE +L A+ +YV N+ T + ELFS GE+K+
Sbjct: 12 SVYRDRRFPGTQEEFEGALLAS--------LTVYVGNMSFYTTEEQAYELFSRAGEIKKI 63
Query: 129 AIHFDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
+ DKN + P G ++Y R DA A+K + +LD +P++++
Sbjct: 64 IMGLDKNTKTPCGFCFILYYSREDAEDAVKYISGTMLDDRPIRVDF 109
>gi|407921975|gb|EKG15108.1| hypothetical protein MPH_07705 [Macrophomina phaseolina MS6]
Length = 282
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 16/113 (14%)
Query: 78 WQHDLFEDS----------------LRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSE 121
W HD +ED R + E G KL V NLH +T +DI ELF
Sbjct: 6 WVHDRYEDDDSRRPSRNRGPRSERLARRTPDTEREPGYKLRVENLHYDLTEEDILELFER 65
Query: 122 IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
IG ++ + +D++ R +G A VVY +DA A + ++ G+P+ + ++
Sbjct: 66 IGPVEDAKLVYDRSDRSTGVAFVVYRSLADARVACREFDGANAHGQPIHLSLL 118
>gi|449438721|ref|XP_004137136.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cucumis
sativus]
gi|449476391|ref|XP_004154724.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cucumis
sativus]
Length = 251
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 69 SFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
S R R F D FE +L+ + T +YV N+ T + + ELFS GE+K+
Sbjct: 12 SIYRDRRFHGSQDEFEVALQTS--------TTVYVGNMSFYTTEEQVYELFSRAGEIKKI 63
Query: 129 AIHFDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
+ DKN + P G V+Y R D A+K + +LD +P++++
Sbjct: 64 IMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF 109
>gi|409077031|gb|EKM77399.1| hypothetical protein AGABI1DRAFT_115306 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 243
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYA-IHFDKNGRPSGSAEVVYARRSDAFAALKR 158
K+ VSNLH +T D+ +F +IG L R I +D++GR SG A V + ++A A K+
Sbjct: 56 KILVSNLHYEITPKDLNVIFGQIGTLIREPLIRYDRSGRSSGQAIVSFETVAEAVRAKKQ 115
Query: 159 YNNVLLDGKPMKIEVVG 175
+N +L G+PM ++ +
Sbjct: 116 FNGILAKGQPMTVDFLA 132
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSA 142
FE S++ A + G LY+ NL G+++D +RELFS G++ + D+NG GS
Sbjct: 305 FEQSMKDA--ADKYQGQNLYLKNLDDGISDDQLRELFSTFGKITSCKVMRDQNGVSKGSG 362
Query: 143 EVVYARRSDAFAALKRYNNVLLDGKPMKI 171
V ++ R +A A+ N +L GKP+ +
Sbjct: 363 FVAFSTREEASQAITEMNGKMLSGKPLYV 391
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 89 AAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYA 147
+ G++ T LYV +L VT+ + ELFS+ G++ + D N R S G A V ++
Sbjct: 27 SVGVAQPLPTTSLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFS 86
Query: 148 RRSDAFAALKRYNNVLLDGKPMKI 171
DA AL+ N V L+ KP+++
Sbjct: 87 NPMDAARALEMLNFVPLNNKPIRV 110
Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+++ NL + N + + FS G + + D G+ G V Y + A +A+K N
Sbjct: 127 IFIKNLDKTIDNKTLHDTFSAFGAILSCKVATDDMGQSKGFGFVQYEKEEFAQSAMKSLN 186
Query: 161 NVLLDGKPMKI 171
+L++ KP+ +
Sbjct: 187 GMLINDKPVYV 197
>gi|356549892|ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Glycine max]
Length = 258
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FE +L + T +YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEHALVTS--------TTVYVGNMSFYTTEEQVYELFSRTGEIKKIIMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G V+Y R D A K + +LD +P++++
Sbjct: 67 LDKNTKTPCGFCFVLYYSREDTEDACKYISGTILDDRPIRVDF 109
>gi|358396008|gb|EHK45395.1| hypothetical protein TRIATDRAFT_274882 [Trichoderma atroviride IMI
206040]
Length = 255
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VSNL VT I+E F + +G +KR + + N + G A V +++ A AL+
Sbjct: 70 SKVIVSNLPKDVTEKQIKEYFVQSVGPIKRVELSYGPNSQSRGIANVTFSKPEGASRALQ 129
Query: 158 RYNNVLLDGKPMKIEVV 174
N +L+DG+P+KIE+V
Sbjct: 130 SLNGLLVDGRPIKIEIV 146
>gi|367054776|ref|XP_003657766.1| hypothetical protein THITE_2123770 [Thielavia terrestris NRRL 8126]
gi|347005032|gb|AEO71430.1| hypothetical protein THITE_2123770 [Thielavia terrestris NRRL 8126]
Length = 250
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 50/205 (24%)
Query: 90 AGISGIEVGTKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYAR 148
AG++G +K+ VSNL V+ I++ F + +G++K+ + + G G A V +
Sbjct: 64 AGLTG---ESKIMVSNLPKDVSEGQIKDYFQQTVGQVKKVELSYGPGGVSRGIAHVTFHH 120
Query: 149 RSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI-----PLQARVNVTGVNGRRKRTVVMTS 203
A A N +L+D KP+K+EVV ++AE+ PL R+ + V +
Sbjct: 121 ADGASKAFSTLNGLLIDNKPVKVEVVVSSAELIPQPKPLAQRIAAPKAQPKS-AAAVKQN 179
Query: 204 GSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRG 263
G+G G AAA G+ G RGR
Sbjct: 180 GTGAKGSAAA-------------------------------GKSTKKTGRRGRSN----- 203
Query: 264 QGKKNPVDKSADDLDKELDNYHAEA 288
PV K+A++LD E+ +Y A
Sbjct: 204 ----RPVKKTAEELDSEMADYFESA 224
>gi|224460061|gb|ACN43581.1| nuclear cap-binding protein [Solanum tuberosum]
Length = 255
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FED+L + I V YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEDAL----LRSITV----YVGNMSFYTTEEQVYELFSRAGEIKKIVMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G ++Y R DA ++K + +LD +P++++
Sbjct: 67 LDKNSKTPWGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDF 109
>gi|312073325|ref|XP_003139470.1| RNA and export factor binding protein 2 [Loa loa]
gi|307765372|gb|EFO24606.1| RNA and export factor binding protein 2 [Loa loa]
Length = 215
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNV 162
+SNL P VT D++ELF+E + A+ ++ +G PSG+A V++ R D +++ V
Sbjct: 70 ISNLGPMVTTTDLQELFAE-HPYEDVAVQYEPDGNPSGTAVVIFKRFEDGMKLKRQFTGV 128
Query: 163 LLDGKPMKIEVVGTN 177
LDGK M + V+ N
Sbjct: 129 RLDGKVMDLFVLTKN 143
>gi|345561390|gb|EGX44479.1| hypothetical protein AOL_s00188g147 [Arthrobotrys oligospora ATCC
24927]
Length = 464
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ V NLH + D+R++FS +GE++R I +DK GR G A V+YA +A A+
Sbjct: 183 SSKIRVENLHYDLGEADLRDVFSRVGEIRRIDIIYDKAGRSEGIANVIYATADEAILAVD 242
Query: 158 RYNNVLLDGKPMKIEV 173
+++ G+P+++ +
Sbjct: 243 QFDGANAKGQPIRVRL 258
>gi|145485817|ref|XP_001428916.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396005|emb|CAK61518.1| unnamed protein product [Paramecium tetraurelia]
Length = 140
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR--PSGSAEVVYARRSDAFAA 155
GT + ++NLH VTN++++EL + G++KR + +DK GR G E Y SDA A
Sbjct: 53 GTFVDITNLHYSVTNEELKELAQQFGKVKRAQVEWDKMGRSLEQGYVEFFYV--SDAKKA 110
Query: 156 LKRYNNVLLDGKPMKIEV 173
++ NN ++ PMK ++
Sbjct: 111 VENLNNTTIESLPMKAQL 128
>gi|413937758|gb|AFW72309.1| hypothetical protein ZEAMMB73_547300, partial [Zea mays]
Length = 215
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R F + +E +L A+ T LY+ N+ T + ELFS GE+K+ +
Sbjct: 15 RDRRFKGTQEEYEATLHAS--------TTLYIGNMSFYTTEEQAYELFSRAGEIKKIIMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G V+Y R DA A+K + +LD +P++++
Sbjct: 67 LDKNSKTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDF 109
>gi|169599889|ref|XP_001793367.1| hypothetical protein SNOG_02770 [Phaeosphaeria nodorum SN15]
gi|160705342|gb|EAT89501.2| hypothetical protein SNOG_02770 [Phaeosphaeria nodorum SN15]
Length = 328
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E + +YV NL +N+D+ ELF+ IG+++R I ++ NGR G+ V + ++ DA A
Sbjct: 224 EPSSTIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEFEKQEDAETA 283
Query: 156 LKRYNNVLLDGKPMKIEVV 174
+ ++ G+P+ ++ V
Sbjct: 284 IAKFTGYQYGGRPLGLQFV 302
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++Y++NL V D+++LF + G + R +H +GRP GS V + DA A+
Sbjct: 60 QVYIANLPYNVGWQDLKDLFRQAAHTGSVLRADVHVAPDGRPKGSGIVAFETVDDARNAI 119
Query: 157 KRYNNVLLDGKPMKI 171
++N G+ +++
Sbjct: 120 NQFNGYEWQGRNLEV 134
>gi|255726510|ref|XP_002548181.1| predicted protein [Candida tropicalis MYA-3404]
gi|240134105|gb|EER33660.1| predicted protein [Candida tropicalis MYA-3404]
Length = 227
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 27/189 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D SLDDII S +K+ + R G +G + G GG SN +
Sbjct: 1 MSASLDKSLDDIISSSRKTFKSRRPGAKVGAKGGNQNRVGKKLGG-----------SNNK 49
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
+ I KS ++ F+ + TK+ VS L + +++I+E F
Sbjct: 50 KN---IVKSNKKPAAAAAPTPAFD----------LSYATKVNVSGLPRDLKHENIKEFFQ 96
Query: 121 E-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG--KPMKIEVVGTN 177
+ IG ++ A+ +++ G+ G A V++ A A+++YNN +DG +K+E+V
Sbjct: 97 QAIGGVQTVALSYNEKGQFKGFATVIFKSSKFASTAVEKYNNASIDGGAAKLKLELVIDT 156
Query: 178 AEIPLQARV 186
++ PL AR+
Sbjct: 157 SKKPLSARI 165
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAF 153
+ T+LYV NLH + DD+R +F G++++ +H D + GR G A V Y DA
Sbjct: 267 LSAPTRLYVGNLHTDLAEDDLRTVFEPFGDIQQINLHIDPETGRSKGFAFVQYKSPEDAK 326
Query: 154 AALKRYNNVLLDGKPMKIEVV 174
AL+ N + L G+ +K+ +V
Sbjct: 327 KALQHCNGMELAGRQLKVGIV 347
>gi|15241430|ref|NP_199233.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
gi|145334719|ref|NP_001078705.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
gi|75338554|sp|Q9XFD1.1|NCBP2_ARATH RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=AtCBP20
gi|4768968|gb|AAD29697.1|AF140219_1 nuclear cap-binding protein [Arabidopsis thaliana]
gi|9759521|dbj|BAB10987.1| nuclear cap-binding protein; CBP20 [Arabidopsis thaliana]
gi|28466941|gb|AAO44079.1| At5g44200 [Arabidopsis thaliana]
gi|110735694|dbj|BAE99827.1| nuclear cap-binding protein [Arabidopsis thaliana]
gi|332007690|gb|AED95073.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
gi|332007691|gb|AED95074.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
Length = 257
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R F + F+++LRA+ T +Y+ N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFSGTQEEFDEALRAS--------TTVYIGNVSFYTTEEQLYELFSRAGEIKKIIMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G V++ R D A+K + +LD +P++++
Sbjct: 67 LDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDF 109
>gi|440476103|gb|ELQ44736.1| hypothetical protein OOU_Y34scaffold00058g9 [Magnaporthe oryzae
Y34]
gi|440481100|gb|ELQ61720.1| hypothetical protein OOW_P131scaffold01159g26 [Magnaporthe oryzae
P131]
Length = 328
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GTK+ V N+H +T +D++ LFS IG + + +D++GR G A V Y DA A+K
Sbjct: 98 GTKIRVENIHYELTEEDLQGLFSRIGPIISLELLYDRSGRSEGVAYVTYESHKDATLAVK 157
Query: 158 RYNNVLLDGKPMKIEVV 174
++ G+P+++ ++
Sbjct: 158 DFDGANAAGQPIRLSII 174
>gi|443897468|dbj|GAC74808.1| RRM motif-containing protein [Pseudozyma antarctica T-34]
Length = 356
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
G+K+ +SNL VT ++ELFS IG L++ A+ + NG+ +G V + R DA A
Sbjct: 229 TGSKIILSNLPLDVTEAQVKELFSTTIGPLRKVAMSYRANGQSTGVCTVEFQRADDAGRA 288
Query: 156 LKRYNNVLLDGK 167
+YNN L+DGK
Sbjct: 289 YTQYNNRLIDGK 300
>gi|389747821|gb|EIM88999.1| hypothetical protein STEHIDRAFT_119773 [Stereum hirsutum FP-91666
SS1]
Length = 136
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
K+ VSNL P V +++LF S +G L+ +H+D GR G A V + +R D A +
Sbjct: 68 KIIVSNLPPDVNEAQVKDLFHSTVGPLRDVTLHYDAAGRSKGVASVHFQKRGDGTKAYQT 127
Query: 159 YNNVLLDG 166
YNN L+DG
Sbjct: 128 YNNRLIDG 135
>gi|297791443|ref|XP_002863606.1| cap-binding protein 20 [Arabidopsis lyrata subsp. lyrata]
gi|297309441|gb|EFH39865.1| cap-binding protein 20 [Arabidopsis lyrata subsp. lyrata]
Length = 257
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R F + F+++LRA+ T +Y+ N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFSGTQEEFDEALRAS--------TTVYIGNVSFYTTEEQLYELFSRAGEIKKIIMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G V++ R D A+K + +LD +P++++
Sbjct: 67 LDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDF 109
>gi|440632855|gb|ELR02774.1| hypothetical protein GMDG_05718 [Geomyces destructans 20631-21]
Length = 252
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VSNL V I+E F++ +G +K+ I + NG+ G A +V+ + A A+
Sbjct: 73 SKIVVSNLPRDVDETQIKEYFAKSVGSVKKVDISYGPNGQSRGIANIVFHKNDGASKAVA 132
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIP 181
N +L+DG+PMKIEV+ ++ P
Sbjct: 133 ALNGLLVDGRPMKIEVLVDASQAP 156
>gi|358388994|gb|EHK26587.1| hypothetical protein TRIVIDRAFT_188853 [Trichoderma virens Gv29-8]
Length = 256
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 87 LRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVV 145
++AA SG +K+ VSNL VT I+E F + +G +K+ + + N + G A V
Sbjct: 61 IKAALPSG---DSKVIVSNLPKDVTEKQIKEYFVQSVGPIKKVELSYGPNSQSRGIANVT 117
Query: 146 YARRSDAFAALKRYNNVLLDGKPMKIEVV 174
+++ A AL+ N +L+DG+P+KIE++
Sbjct: 118 FSKPEGASKALQTLNGLLVDGRPIKIEII 146
>gi|389748119|gb|EIM89297.1| hypothetical protein STEHIDRAFT_94454 [Stereum hirsutum FP-91666
SS1]
Length = 252
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFS-EIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+E G+K+ +SNL V +++ ELF +G +K I ++ GR G A V + R DA
Sbjct: 58 AVEAGSKILLSNLPMDVGENEVEELFKRTVGPMKDLFIIYNSQGRSKGMAVVTFQRPGDA 117
Query: 153 FAALKRYNNVLLDGKP-MKIEVV 174
A +YN ++DGK +KIE+V
Sbjct: 118 VVARTKYNQKIVDGKHRIKIEIV 140
>gi|363808374|ref|NP_001242001.1| uncharacterized protein LOC100789535 [Glycine max]
gi|255647255|gb|ACU24095.1| unknown [Glycine max]
Length = 235
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FE +L + T +YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEHALLTS--------TTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G V+Y R D K + +LD +P++++
Sbjct: 67 LDKNTKTPCGFCFVLYYSREDTEDVCKYISGTILDDRPIRVDF 109
>gi|310790792|gb|EFQ26325.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 382
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
K+ V N+H +T +D+ ELF+ IG + + + +D+ GR G A V R DA A+K +
Sbjct: 141 KIRVENIHYELTPEDLEELFNRIGPVAKLDLKYDRAGRSEGVAFVTMESREDALEAVKEF 200
Query: 160 NNVLLDGKPMKIEVV 174
+ +G+P+++ ++
Sbjct: 201 DGANANGQPIRLSIM 215
>gi|238880864|gb|EEQ44502.1| predicted protein [Candida albicans WO-1]
Length = 228
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 95/191 (49%), Gaps = 31/191 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D SLDDII S KK+ + + G A+ G GG G G +N +
Sbjct: 1 MSASLDKSLDDIISSNKKTFKSKRPG-AKFG----------AKGGNRVGKKIGGTNNNKK 49
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEV--GTKLYVSNLHPGVTNDDIREL 118
P IAK F + + AA + I++ TK+ VS L + +D+I+E
Sbjct: 50 P----IAK-FNKPAA----------AAAAAAVPAIDLSYATKVNVSGLPKDLKHDNIKEF 94
Query: 119 F-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG--KPMKIEVVG 175
F S+IG ++ A+ +++ G+ G A +V+ A AA+ +YN +DG +++E++
Sbjct: 95 FQSQIGGVQTVALSYNEKGQFKGFATIVFKSSKFATAAVDKYNGASIDGGAAKLRLELII 154
Query: 176 TNAEIPLQARV 186
++ PL AR+
Sbjct: 155 DTSKKPLAARI 165
>gi|406605793|emb|CCH42784.1| Polyadenylate-binding protein 1 [Wickerhamomyces ciferrii]
Length = 436
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E + +YV NL +NDD+ ELF G + I +D GRP+GSA V + A AA
Sbjct: 355 EKNSTIYVDNLPFATSNDDLFELFETAGRVSAAEIKYDPTGRPAGSAVVKFESEESAEAA 414
Query: 156 LKRYNNVLLDGKPMKIEVVGTNAEIP 181
+ N G+P+ I T A++P
Sbjct: 415 INELNEYSYGGRPLNI----TFAKLP 436
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 40/74 (54%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G +++V+NL + ++++F E GE+ + D+ GR G V + + D A+K
Sbjct: 242 GFEVFVANLPFSINWQALKDIFREAGEITHADVRLDEGGRSRGFGIVSFKNKEDVDNAIK 301
Query: 158 RYNNVLLDGKPMKI 171
++N ++G+ + +
Sbjct: 302 QFNGYEIEGRQLDV 315
>gi|241953293|ref|XP_002419368.1| RNA-binding RNA annealing protein, putative; mRNA export protein,
putative [Candida dubliniensis CD36]
gi|223642708|emb|CAX42962.1| RNA-binding RNA annealing protein, putative [Candida dubliniensis
CD36]
Length = 230
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 26/189 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D SLDDII S KK+ + + G +G G+ G ++ G + P++
Sbjct: 1 MSASLDKSLDDIISSNKKTFKSKRPGAKFGAKG------GNRVGKKIGGTNNKKPIA--- 51
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF- 119
F R ++ + TK+ VS L + +D+I+E F
Sbjct: 52 --------KFNRPAAAAAAAVAAVPTI------DLSYATKVNVSGLPKDLKHDNIKEFFQ 97
Query: 120 SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG--KPMKIEVVGTN 177
S+IG ++ A+ +++ G+ G A +++ A AA+ +YN +DG +++E++
Sbjct: 98 SQIGGVQTVALTYNEKGQFKGFATIIFKSSKFATAAVDKYNGASIDGGAAKLRLELIIDT 157
Query: 178 AEIPLQARV 186
++ PL AR+
Sbjct: 158 SKKPLAARI 166
>gi|194769432|ref|XP_001966808.1| GF19217 [Drosophila ananassae]
gi|190618329|gb|EDV33853.1| GF19217 [Drosophila ananassae]
Length = 497
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G +L VSNLH VT DIRELF++IG + Y H RP G+AEV+Y A A++
Sbjct: 388 GYRLLVSNLHANVTTADIRELFNDIGPM--YDAHV---VRP-GTAEVIYKTLEHAEMAVE 441
Query: 158 RYNNVLLDGKPMKIEVVG 175
Y++ D +PM +V
Sbjct: 442 AYHHREFDDQPMHCVLVN 459
>gi|402586075|gb|EJW80013.1| hypothetical protein WUBG_09076 [Wuchereria bancrofti]
Length = 219
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNV 162
+SNL P VT D++ELF++ + A+ ++ +G PSG+A V++ R D +++ V
Sbjct: 74 ISNLGPMVTTTDLQELFAQ-HPYEDVAVQYEPDGSPSGTAVVIFKRFEDGMKLKRQFTGV 132
Query: 163 LLDGKPMKIEVVGTN 177
LDGK M + V+ N
Sbjct: 133 RLDGKVMDLFVLTKN 147
>gi|121714118|ref|XP_001274670.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
gi|119402823|gb|EAW13244.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
Length = 264
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VS L V +I+E F++ G +KR + +++NG G A +V+++ A A K
Sbjct: 66 SKIMVSGLPSDVNEGNIKEYFTKSAGPVKRVMLTYNQNGTSRGIASIVFSKPDTAAKAAK 125
Query: 158 RYNNVLLDGKPMKIEVV 174
N +L+DG+PMKIEVV
Sbjct: 126 DLNGLLVDGRPMKIEVV 142
>gi|268535748|ref|XP_002633009.1| Hypothetical protein CBG21776 [Caenorhabditis briggsae]
Length = 227
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 32/179 (17%)
Query: 2 ATHVDMSLDDIIKSRKKSER---ERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
AT +DM+L DII S+KKS + +R +A G + RGPS + + R +G A RG +
Sbjct: 4 ATSIDMALSDIISSKKKSTKKGVKRPIKKAAAGGVKKRGPSAASTPRRQSGGAGRGGI-- 61
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
S+ G S ++ +SNL P V + D+R+L
Sbjct: 62 -------------------------RKSVGGRGDSNDNREVRVNLSNLAPSVLSGDLRQL 96
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
F+E ++K +++F++ G +G+ ++ ++R A ++++ V LDGK MK ++ T
Sbjct: 97 FAEF-KIKNCSVNFNEKGAAAGTGDITLSKR-QADRLIQKFAGVALDGKEMKFAIIDTT 153
>gi|336274132|ref|XP_003351820.1| hypothetical protein SMAC_00366 [Sordaria macrospora k-hell]
Length = 309
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G+K+ V N+H +T +D+ LFS IG L + + +D+ GR G+A V Y DA A++
Sbjct: 71 GSKIRVDNIHYELTQEDLEGLFSRIGPLVKLDMKYDRAGRSEGTAFVTYESPQDASRAIR 130
Query: 158 RYNNVLLDGKPMKIEVVGT 176
Y+ G+P+++ ++ +
Sbjct: 131 EYDGANAAGQPIRLTLMPS 149
>gi|440636356|gb|ELR06275.1| hypothetical protein GMDG_02069 [Geomyces destructans 20631-21]
Length = 312
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 31/246 (12%)
Query: 66 IAKSFR---RTRNFPWQHDLFEDSLRAAG-----------ISGIEVGTKLYVSNLHPGVT 111
I KS R R + W HD + D+ + + +KL V N+H +T
Sbjct: 38 IRKSIRDEPRDLDSEWVHDKYNDNTSSNAGRPRRYSPDRERAYAPASSKLRVDNVHYDLT 97
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
D+ LF+ IG + + + +D+ GR G A V Y DA AA++ Y+ +G+P+++
Sbjct: 98 ESDLDGLFNRIGPVAKLELVYDRAGRSEGIAYVTYESARDASAAVREYDGANANGQPIRL 157
Query: 172 EVVGT------------NAEIPLQARVN-VTGVNGRRKRTVVMTSGSGNAGGAAAINRGP 218
V + +A +P ++ + +T G R R+ S + G N
Sbjct: 158 VAVPSGPGGGGRRNPFDSAVLPPRSLADRITRAAGSRDRSYSPVRHS-DVSGPPPPNVDR 216
Query: 219 GSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLD 278
GR R R G+ G R RG G R GR + K+ ++LD
Sbjct: 217 YVPGRDRSSRSPMTRRRDGRPPGARRERGDRSDRGDSRREAGGRSARRPK---KTQEELD 273
Query: 279 KELDNY 284
E+++Y
Sbjct: 274 AEMEDY 279
>gi|429849976|gb|ELA25298.1| RNA binding domain-containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 430
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 78 WQHDLFE--DSLRAAGISGI--------EVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
W HD FE DS R KL V N+H +T +D+ ELF+ IG + +
Sbjct: 70 WVHDRFEEHDSRRGPNNRRRRDSPEQRDSSSAKLRVDNVHYELTAEDLEELFNRIGPVVK 129
Query: 128 YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
+ +D+ GR G A V + R DA A+K ++ +G+P+K+ +
Sbjct: 130 LDLKYDRAGRSEGIAFVTMSTREDAQEAIKEFDGANANGQPIKLSFM 176
>gi|449297855|gb|EMC93872.1| hypothetical protein BAUCODRAFT_212912 [Baudoinia compniacensis
UAMH 10762]
Length = 329
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 78 WQHDLFEDSL----RAAGISGIEV--------GTKLYVSNLHPGVTNDDIRELFSEIGEL 125
W HD FED R A E GTKL V N+H +T +DIR LF G L
Sbjct: 58 WVHDRFEDDRYDHRRPAHEDRYETAGRPRETGGTKLRVDNIHYELTEEDIRGLFERKGPL 117
Query: 126 KRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
+ +D+ R G+A V Y DA A+ Y+ +G+P++I
Sbjct: 118 VSVKLLYDRADRSQGTAFVTYEDPRDARDAVADYDGQNANGQPIRI 163
>gi|343426876|emb|CBQ70404.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 277
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 45/232 (19%)
Query: 78 WQHDLFEDSLRA-----------------AGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
W+HD +D +R+ + ++ ++ KL + NLH V+ D+ LF
Sbjct: 39 WKHDRDQDDVRSRRGPRVGRAPMFFPQDKSEVNEVKPTGKLTIENLHWDVSEQDLENLFG 98
Query: 121 EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI 180
IG + + I +D+ RP+G A VVY + A A ++ DG K +V+ E+
Sbjct: 99 SIGPVTKAYIKYDRADRPTGVAVVVYDNPNHALQAKNQF-----DGAKAKGQVISITQEM 153
Query: 181 ----PLQARVNVTGVNGRRKRTVVMTSG--SGNAGGA--AAINRGPGSQGRRGGLRRSSQ 232
P A+ + + R + + G + AGGA A GP G R G +R SQ
Sbjct: 154 RADRPKGAQGSQRSLLSRFDLSSRLKDGAQAQEAGGANTFADRLGPVRNGGRNG-QRESQ 212
Query: 233 GRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
GQ GR R + K+ PV +A DLD EL+ +
Sbjct: 213 RPAAGQQPSAGRPRNAPP------------KREKRKPV--TAADLDAELEAF 250
>gi|116199465|ref|XP_001225544.1| hypothetical protein CHGG_07888 [Chaetomium globosum CBS 148.51]
gi|88179167|gb|EAQ86635.1| hypothetical protein CHGG_07888 [Chaetomium globosum CBS 148.51]
Length = 250
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 88 RAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVY 146
RA G++G +K+ VSNL V+ I+E F + +G++K+ I + G G A V +
Sbjct: 62 RAGGVTG---ESKIMVSNLPKDVSEAQIKEYFVQSVGQVKKVEISYGPGGVSRGIAHVSF 118
Query: 147 ARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQAR 185
+ A A N +L+D KP+K+EVV +A++ Q +
Sbjct: 119 QQADGASKAFATLNGLLIDSKPVKVEVVVASADLIPQPK 157
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSA 142
FE SL+ A + G LY+ NL + +D + ELFS G++ Y + D+NG GS
Sbjct: 302 FEQSLKDA--ADKYQGLNLYLKNLDDSIGDDQLCELFSNFGKITSYKVMRDQNGLSKGSG 359
Query: 143 EVVYARRSDAFAALKRYNNVLLDGKPMKI 171
V ++ R +A AL N ++ GKP+ +
Sbjct: 360 FVAFSTREEASQALTEMNGKMISGKPLYV 388
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 89 AAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYA 147
A G++ T LYV +L V++ + ELFS+ G++ + D R S G A V Y+
Sbjct: 24 AVGVAQPLPTTSLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNYS 83
Query: 148 RRSDAFAALKRYNNVLLDGKPMKI 171
DA AL+ N L+ KP+++
Sbjct: 84 NPLDAARALEVLNFAALNNKPIRV 107
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+++ NL + N + E FS G + + D+ G+ G V Y + A A+K N
Sbjct: 124 IFIKNLDKTIDNKTLHETFSSFGTILSCKVAVDEAGQSKGFGFVQYDKEEAAQNAIKSLN 183
Query: 161 NVLLDGKPMKI 171
+L++ KP+ +
Sbjct: 184 GMLINDKPVFV 194
>gi|225446445|ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
[Vitis vinifera]
gi|359485224|ref|XP_003633238.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 2
[Vitis vinifera]
gi|359485226|ref|XP_003633239.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 3
[Vitis vinifera]
Length = 253
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R + FP + FE +L + +Y+ N+ T + + ELFS GE+K+ +
Sbjct: 15 RDKRFPGTQEDFEHALLTS--------MTVYIGNMSFYTTEEQVYELFSRAGEIKKIIMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G V+Y R DA A+K + +LD +P++++
Sbjct: 67 LDKNSKTPCGFCFVLYYSRDDAEDAVKYISGTVLDDRPIRVDF 109
>gi|388853710|emb|CCF52678.1| related to HRB1-Poly(A+) RNA-binding protein, involved in the
export of mRNAs from the nucleus to the cytoplasm
[Ustilago hordei]
Length = 514
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+++V NL +N+D+ ELF G+++ I FD +GR G+ V +A DA A+ ++
Sbjct: 393 QIFVKNLPWSTSNEDLVELFQTTGKVEEAEIQFD-HGRSKGTGVVQFASVDDAETAIAKF 451
Query: 160 NNVLLDGKPMKIEV 173
NN + G+P+ IE
Sbjct: 452 NNYVYGGRPLDIEF 465
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
T+L+++NL V+ D+++LF G + R ++ +GR G+ V +A +DA A+
Sbjct: 214 TQLFITNLPFDVSWQDLKDLFRSAGNVTRADVNMGPDGRSKGTGIVAFANSNDASNAIAM 273
Query: 159 YNNVLLDGKPMKI 171
Y+ G+ +++
Sbjct: 274 YHGYDFRGRILEV 286
>gi|385304605|gb|EIF48617.1| rna-binding rna annealing mrna export [Dekkera bruxellensis
AWRI1499]
Length = 275
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSD 151
S +E+ TK+ VS L + +++E F S+IG + ++ +++ G+ +G A V++ S
Sbjct: 82 SSLEMATKVVVSGLPTDIKPLNVKEFFQSQIGGVSHVSLSYNERGQSTGVATVIFKHAST 141
Query: 152 AFAALKRYNNVLLDG--KPMKIEVVGTNAEIPLQARVN 187
A A+ +YNN +DG K +K+E+V + L AR+
Sbjct: 142 ARKAVAKYNNAPIDGKRKTLKLELVVDPEQKSLAARIT 179
>gi|378732142|gb|EHY58601.1| hypothetical protein HMPREF1120_06609 [Exophiala dermatitidis
NIH/UT8656]
Length = 451
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E +YV NL +N+D+ ELF+ IG+++R I ++ NGR G+ V + DA
Sbjct: 344 SGGEKNPIIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEFGSADDA 403
Query: 153 FAALKRYNNVLLDGKPMKIEVVG-TNA 178
A+ ++ + G+P+ + V TNA
Sbjct: 404 ETAISKFTGYMYGGRPLGLSYVKYTNA 430
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+LYVSNL V D+++LF + G + R +H D GRP G+ V + +DA A+
Sbjct: 171 QLYVSNLPFNVGWQDLKDLFRQAATEGGVIRADVHVDATGRPKGTGIVAFESPNDARNAI 230
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 231 QQFNGYDWHGRALEV 245
>gi|50555463|ref|XP_505140.1| YALI0F07909p [Yarrowia lipolytica]
gi|49651010|emb|CAG77947.1| YALI0F07909p [Yarrowia lipolytica CLIB122]
Length = 221
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 8/79 (10%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
T L + NLH +T +D+ +LF+++G + IH+D++GR G A VV++R DA A+
Sbjct: 66 NTVLLIRNLHYELTENDLYDLFNKVGRVDDVEIHYDRSGRSLGDANVVFSRPEDAQDAID 125
Query: 158 RYNNVLLDGKP---MKIEV 173
++ DGK +KIEV
Sbjct: 126 KF-----DGKRAAGLKIEV 139
>gi|320587464|gb|EFW99944.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 319
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 27/176 (15%)
Query: 1 MATHVDMSLDDIIKSRK--KSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MAT++D SLD+I+ RK + + + R G S++G + +R
Sbjct: 1 MATNMDRSLDEILADRKSYRDDPRKIDDEWVHDRYDDDGEHLSLAGVHTAHSTQRLTAHR 60
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
RP+ R A + + GTK+ V N+H +T +DI L
Sbjct: 61 FRPA-------------------------RKAVLGRSQRGTKIRVENIHYELTKEDIEGL 95
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
F IG + + +D+ GR G A V Y DA A++ ++ G+P+++ +V
Sbjct: 96 FRRIGPVLSTELVYDRAGRSDGVAYVTYEIYDDAKEAIREFDGANAKGQPIRLSIV 151
>gi|210075162|ref|XP_002142994.1| YALI0A20867p [Yarrowia lipolytica]
gi|199424907|emb|CAR65189.1| YALI0A20867p [Yarrowia lipolytica CLIB122]
Length = 223
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
++ +K+ +SNL + D IR+ F +EIG + + ++K G P+G V + R+ DA
Sbjct: 73 KLASKVIISNLPQDIGEDAIRDYFKTEIGPISACTMVYNKGGHPAGIVNVTFKRQGDAAK 132
Query: 155 ALKRYNNVLLD--GKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTV 199
A ++N +D + MK+E+V ++ PL AR+ K TV
Sbjct: 133 AADKFNGTSIDRGKRYMKVELVYDPSKTPLSARLQPKPEPAPAKATV 179
>gi|150951548|ref|XP_001387884.2| small subunit of the nuclear mRNA cap-binding protein complex CBC
[Scheffersomyces stipitis CBS 6054]
gi|149388685|gb|EAZ63861.2| small subunit of the nuclear mRNA cap-binding protein complex CBC,
partial [Scheffersomyces stipitis CBS 6054]
Length = 167
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 15/115 (13%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+PS Y I ++ RR +NF D + SL + + YV NL T + I ELF
Sbjct: 17 KPSQYLIKRAVRR-QNF----DNLQKSLHSKTV---------YVGNLSHFTTEEQIHELF 62
Query: 120 SEIGELKRYAIHFDKNG-RPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
S+ G + R + D+N P G VVY + A+K +LDG+ + I++
Sbjct: 63 SKCGSIDRIIMGLDRNKLTPCGFCFVVYKLEEGSLNAMKFLQKTILDGQSLSIDL 117
>gi|67541498|ref|XP_664523.1| hypothetical protein AN6919.2 [Aspergillus nidulans FGSC A4]
gi|40738484|gb|EAA57674.1| hypothetical protein AN6919.2 [Aspergillus nidulans FGSC A4]
gi|259480524|tpe|CBF71737.1| TPA: RNA annealing protein Yra1, putative (AFU_orthologue;
AFUA_5G13860) [Aspergillus nidulans FGSC A4]
Length = 458
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VS L V +I+E FS+ G +KR + +++NG G A +V+ A A K
Sbjct: 63 SKIMVSGLPADVNEANIKEYFSKSAGPVKRVMLTYNQNGTSRGIASIVFREPDTAAKAAK 122
Query: 158 RYNNVLLDGKPMKIEVV 174
N +L+DG+PMKIEVV
Sbjct: 123 ELNGLLVDGRPMKIEVV 139
>gi|452981093|gb|EME80853.1| hypothetical protein MYCFIDRAFT_124169, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 488
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E ++V NL +NDD+ ELFS IGE+ R I ++ NGR GS V +A A
Sbjct: 385 SGGEQSATIHVKNLPWSTSNDDLNELFSTIGEVVRAEIQYEPNGRSRGSGVVQFAAEEHA 444
Query: 153 FAALKRYNNVLLDGKPMKIEV 173
A++++ G+P+ ++
Sbjct: 445 GTAIEKFQGYSYGGRPLGLDF 465
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+++VSNL V D+++LF + G + R +H +G P GS V + DA A++ +
Sbjct: 209 QIFVSNLPFQVGWQDLKDLFRQAGNVIRADVHMAPDGSPKGSGIVAFETPDDAQNAIQTF 268
Query: 160 NNVLLDGKPMKI 171
+ G+ +++
Sbjct: 269 HGYDWQGRVLEV 280
>gi|322709802|gb|EFZ01377.1| protein mlo3-like protein [Metarhizium anisopliae ARSEF 23]
Length = 257
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 38/189 (20%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VSNL V+ I+E F + +G +KR + + N G A V + + A A +
Sbjct: 68 SKVIVSNLPKDVSEQQIKEYFVQAVGPIKRVDLVYGPNSVSRGIANVTFHKPDGAGKAFQ 127
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRG 217
+ N +L+D +P+KIE+V G A A
Sbjct: 128 KLNGLLVDNRPIKIEIV---------------------------------VGAAQADKVM 154
Query: 218 PGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGG-GGGGRGRGRGRGRGQGKKNPVDKSADD 276
P + R++Q + + + G+G GG G G + + R P K+A++
Sbjct: 155 PPV---KSLAERATQPKAQPKSAASGKGATGGVGKAGNAKAANKKRRGRSARPAKKTAEE 211
Query: 277 LDKELDNYH 285
LD E+ +Y
Sbjct: 212 LDSEMTDYF 220
>gi|346979325|gb|EGY22777.1| RNA binding domain-containing protein [Verticillium dahliae
VdLs.17]
Length = 329
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+KL V NLH +T +++ LF+ IG + R + +D+ GR G A V Y DA A+
Sbjct: 102 TSSKLKVENLHYELTTEELEGLFNRIGPVVRLNLRYDRAGRSEGVAYVTYEHPDDARQAI 161
Query: 157 KRYNNVLLDGKPMKIEVV 174
+ ++ +G+P+++ +V
Sbjct: 162 REFDGANANGQPIRLSIV 179
>gi|403371927|gb|EJY85849.1| RNA binding protein, putative [Oxytricha trifallax]
Length = 211
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 57 SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGI-SGIEVGTKLYVSNLHPGVTNDDI 115
SN + Y +S +++++ PW ++ + +G+ SG GTKL + NLH +T D +
Sbjct: 96 SNRNQNQYQDNQS-QKSKSTPWDTKKEQNEQQISGLASG---GTKLLIKNLHFEITEDKL 151
Query: 116 RELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
+E+ + G++ + +DK+ R +G A ++ + A ALK N +++G+ ++I
Sbjct: 152 QEILTPYGQVHSCKLVWDKHDRSTGEAIAIFEKPKSADEALKELNGSIVEGQKIQI 207
>gi|133901844|ref|NP_001076697.1| Protein ALY-3, isoform a [Caenorhabditis elegans]
gi|3878709|emb|CAA92829.1| Protein ALY-3, isoform a [Caenorhabditis elegans]
Length = 240
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 35/179 (19%)
Query: 2 ATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP 61
AT+VD+SL+DII +K+ +GS+ + G ARRG N RP
Sbjct: 4 ATNVDLSLEDIISKTRKT-------------------TGSIQ-KKSFGGARRG---NTRP 40
Query: 62 SSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLY---VSNLHPGVTNDDIREL 118
+ RR+ DL D+++ GIS +K+ +SNL P V + D+ EL
Sbjct: 41 TGLP-----RRSGGSGGWKDL--DAVQNHGISSRGNDSKVIRVNISNLAPTVISSDLEEL 93
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTN 177
F + L +++F+++G G+ ++ +R DA +++++ V LDGK MK V+ ++
Sbjct: 94 FGDY-RLSSVSVNFNEHGDSLGTGDISLTKR-DAERLVQKFSGVALDGKIMKFAVIDSS 150
>gi|85080068|ref|XP_956471.1| hypothetical protein NCU01793 [Neurospora crassa OR74A]
gi|18376118|emb|CAD21184.1| related to RNA annealing protein [Neurospora crassa]
gi|28917537|gb|EAA27235.1| hypothetical protein NCU01793 [Neurospora crassa OR74A]
gi|336468425|gb|EGO56588.1| hypothetical protein NEUTE1DRAFT_123085 [Neurospora tetrasperma
FGSC 2508]
gi|350289317|gb|EGZ70542.1| hypothetical protein NEUTE2DRAFT_92020 [Neurospora tetrasperma FGSC
2509]
Length = 249
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VSNL V+ I+E F + IG++KR + + G G A + + A A
Sbjct: 70 SKIVVSNLPKDVSEGQIKEYFQQAIGQVKRVELSYGPGGTSRGIAHITFHHADGATKAYN 129
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQAR 185
N +L+D +P+K+EVV +NAE+ Q +
Sbjct: 130 TLNGLLIDNRPVKVEVVVSNAELIPQPK 157
>gi|392588996|gb|EIW78327.1| hypothetical protein CONPUDRAFT_60913 [Coniophora puteana
RWD-64-598 SS2]
Length = 128
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
K+ VSNL V ++ELF + +G L+ +H+D GR G A + + R+ D A ++
Sbjct: 60 KIIVSNLPQDVNEAQVKELFHTTVGPLREVTLHYDSAGRSKGVAAIHFQRKGDGTKAYQQ 119
Query: 159 YNNVLLDG 166
YNN L+DG
Sbjct: 120 YNNRLIDG 127
>gi|317028251|ref|XP_001390338.2| alpha-actinin, sarcomeric (f-actin cross linking protein)
[Aspergillus niger CBS 513.88]
Length = 915
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G KL V N+H +T D+ +LF+ IG + ++ +D+ GR G A V Y DA A++
Sbjct: 667 GAKLRVENIHYDITETDLEDLFTRIGPISNVSLVYDRAGRSEGVAFVTYTHIGDARTAIR 726
Query: 158 RYNNVLLDGKPMKIEVVGTNA 178
++ G+P+++ ++ T A
Sbjct: 727 EFDGANAKGQPIRLTLISTGA 747
>gi|336464082|gb|EGO52322.1| hypothetical protein NEUTE1DRAFT_90482 [Neurospora tetrasperma FGSC
2508]
Length = 332
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 80/184 (43%), Gaps = 27/184 (14%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+I+ RK + R G R GAA R
Sbjct: 6 LDRSLDEILAERKPNGRGS---------------GSRGRGNRDNGAANRQRRDRNDYPRD 50
Query: 65 TIAKSFR----RTRNFPWQHDLFE--DSLRA------AGISGIEVGTKLYVSNLHPGVTN 112
+ KSFR R + W HD FE D RA G+K+ V N+H +T
Sbjct: 51 GVRKSFRDDAPRNLDSEWVHDKFEENDHRRAPRRRNSPEPFSDARGSKIRVDNIHYELTQ 110
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
+D+ LFS IG L + + +D+ GR G+A V Y DA A++ Y+ G+P+++
Sbjct: 111 EDLEGLFSRIGPLVKLDMKYDRAGRSEGTAFVTYESPQDASRAIREYDGANAAGQPIRLT 170
Query: 173 VVGT 176
++ +
Sbjct: 171 LMPS 174
>gi|336272099|ref|XP_003350807.1| hypothetical protein SMAC_02477 [Sordaria macrospora k-hell]
gi|380094971|emb|CCC07473.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 249
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VSNL V+ I+E F + IG++KR + + G G A + + A A
Sbjct: 70 SKIVVSNLPKDVSEGQIKEYFQQAIGQVKRVELSYGPGGASRGIAHITFHHADGATKAYN 129
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQAR 185
N +L+D +P+K+EVV +NAE+ Q +
Sbjct: 130 ALNGLLIDNRPVKVEVVVSNAELIPQPK 157
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 85 DSLR-AAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSA 142
DSL G+S G +LYV +LH +T DIR++F GEL+ +H D GR G A
Sbjct: 343 DSLHLPPGVSSHHGGMQLYVGSLHFNLTESDIRQVFEPFGELEFVDLHRDPMTGRSKGYA 402
Query: 143 EVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
V Y R DA AL++ L G+ +++ V
Sbjct: 403 FVQYKRGEDAKMALEQMEGFELAGRTLRVNTV 434
>gi|85090449|ref|XP_958422.1| hypothetical protein NCU07421 [Neurospora crassa OR74A]
gi|28919783|gb|EAA29186.1| hypothetical protein NCU07421 [Neurospora crassa OR74A]
Length = 332
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 27/184 (14%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+I+ RK + R G R GAA R
Sbjct: 6 LDRSLDEILAERKPNGRGS---------------GSRGRGNRDNGAANRQRRDRNDYPRD 50
Query: 65 TIAKSFR----RTRNFPWQHDLFEDSLRAAGISGIEV--------GTKLYVSNLHPGVTN 112
+ KSFR R + W HD FE++ R G+K+ V N+H +T
Sbjct: 51 GVRKSFRDDAPRNLDSEWVHDKFEENDRRRAPRRRNSPEPFSDARGSKIRVDNIHYELTQ 110
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
+D+ LFS IG L + + +D+ GR G+A V Y DA A++ Y+ G+P+++
Sbjct: 111 EDLEGLFSRIGPLVKLDMKYDRAGRSEGTAFVTYESPQDASRAIREYDGANAAGQPIRLT 170
Query: 173 VVGT 176
++ +
Sbjct: 171 LMPS 174
>gi|350296162|gb|EGZ77139.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 332
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 27/184 (14%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+I+ RK + R G R GAA R
Sbjct: 6 LDRSLDEILAERKPNGRGS---------------GSRGRGNRDNGAANRQRRDRNDYPRD 50
Query: 65 TIAKSFR----RTRNFPWQHDLFEDSLRAAGISGIEV--------GTKLYVSNLHPGVTN 112
+ KSFR R + W HD FE++ R G+K+ V N+H +T
Sbjct: 51 GVRKSFRDDAPRNLDSEWVHDKFEENDRRRAPRRRNSPEPFSDARGSKIRVDNIHYELTQ 110
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
+D+ LFS IG L + + +D+ GR G+A V Y DA A++ Y+ G+P+++
Sbjct: 111 EDLEGLFSRIGPLVKLDMKYDRAGRSEGTAFVTYESPQDASRAIREYDGANAAGQPIRLT 170
Query: 173 VVGT 176
++ +
Sbjct: 171 LMPS 174
>gi|322698565|gb|EFY90334.1| protein mlo3-like protein [Metarhizium acridum CQMa 102]
Length = 302
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 38/189 (20%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VSNL V+ I+E F + +G +KR + + N G A V + + A A +
Sbjct: 119 SKVIVSNLPKDVSEQQIKEYFVQAVGPIKRVDLVYGPNSVSRGIANVTFHKPDGAGKAFQ 178
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRG 217
+ N +L+D +P+KIE+V G A A
Sbjct: 179 KLNGLLVDNRPIKIEIV---------------------------------VGAAQADKVM 205
Query: 218 PGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGG-GGGGRGRGRGRGRGQGKKNPVDKSADD 276
P + R++Q + + + G+G GG G G + + R P K+A++
Sbjct: 206 PPVKSL---AERATQPKAQPKSAASGKGATGGVGKAGNAKAANKKRRGRSARPAKKTAEE 262
Query: 277 LDKELDNYH 285
LD E+ +Y
Sbjct: 263 LDSEMTDYF 271
>gi|388855509|emb|CCF50955.1| uncharacterized protein [Ustilago hordei]
Length = 386
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Query: 29 RRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLR 88
RRG GR GP+ S + R AR S RP++ IA++ ++ P
Sbjct: 10 RRGSGRKNGPANSRATRRSDPYARD---SRVRPNA-PIAQAQESSQAQPQAQSGISYPPP 65
Query: 89 AAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSG-----SAE 143
I G T + VSNL G +N+D+R FS G + + RPS S E
Sbjct: 66 ELSIRGSSGPTWIIVSNLVVGTSNEDVRLTFSAFGRVD----EVKQRPRPSANHPTVSFE 121
Query: 144 VVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIP 181
V + RR DA A+ ++N L DG+ +++ + AE+P
Sbjct: 122 VAFDRREDAEMAVDKFNGALADGRILQVSI--KKAEVP 157
>gi|71004962|ref|XP_757147.1| hypothetical protein UM01000.1 [Ustilago maydis 521]
gi|46096777|gb|EAK82010.1| hypothetical protein UM01000.1 [Ustilago maydis 521]
Length = 356
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 113/282 (40%), Gaps = 66/282 (23%)
Query: 39 SGSVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG 98
S S +G R +GA+ R N P Y+ A S W+HD ++ AA + G
Sbjct: 76 SSSTAGSRTSGASSRYSPYNRTPR-YSAADS-----EASWKHDRYQPDADAALRPDVRNG 129
Query: 99 T---------------------KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+ KL + NLH V+ D++ LF IG + + I +D++ R
Sbjct: 130 SSRAPLFFPADKAETNDVKPTGKLIIENLHYDVSESDLKNLFESIGPVTKAYIRYDRSDR 189
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI-------------PLQA 184
+G A VVY + A A ++ DG K +V+ E+ L +
Sbjct: 190 STGVAVVVYDNPNHALQAKAQF-----DGAKAKGQVISITQEMRAERLKGAHASQRTLLS 244
Query: 185 RVNVTG--VNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGR 242
R N++ +G + V +G A + A GP +G R G +R+S R Q R
Sbjct: 245 RFNLSSRIKDGAEAGSRVHAAG---ASSSFADRLGPVQRGGRHGEQRNSTRSSRAQLGAR 301
Query: 243 GRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
+ G R K+ PV +A DLD EL+ +
Sbjct: 302 SQ----NGAAKR----------EKRKPV--TAADLDAELEAF 327
>gi|310794536|gb|EFQ29997.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 257
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 46/195 (23%)
Query: 99 TKLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VSNL V I+E F + +G +KR I + N G A + + A A +
Sbjct: 69 SKVIVSNLPKDVNEQQIKEYFVTSVGPIKRVEISYGPNSVSRGIANITFREPDGASKAFQ 128
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRG 217
+ N +L+D +P+KIE+V G + A N
Sbjct: 129 KLNGLLVDNRPIKIEIV---------------------------------VGASQAANVI 155
Query: 218 PGSQGRRGGLRRSSQGRGRGQGQGRGR-------GRGGGGGGGRGRGRGRGRGQGKKNPV 270
P + + R++Q + + + + +G G RG+ R G+ P
Sbjct: 156 PPT---KSLAERTTQPKAQPKSAANNKRNTTNAANKGAAAPGARGKKPERRARTGR--PA 210
Query: 271 DKSADDLDKELDNYH 285
K+A++LD E+ +Y
Sbjct: 211 KKTAEELDSEMADYF 225
>gi|407926421|gb|EKG19388.1| hypothetical protein MPH_03251 [Macrophomina phaseolina MS6]
Length = 279
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VSNL VT I+E F++ +G +K+ + + NG+ G A V++++ + A A
Sbjct: 71 SKILVSNLPHDVTEPQIKEYFAKSVGPVKKVLLTYGPNGQSRGVATVIFSKANAAAEAAA 130
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQA 184
+N + +D +PM++EV+ ++IP A
Sbjct: 131 AHNGLKVDNRPMRVEVIVGASDIPAPA 157
>gi|45198667|ref|NP_985696.1| AFR149Cp [Ashbya gossypii ATCC 10895]
gi|44984677|gb|AAS53520.1| AFR149Cp [Ashbya gossypii ATCC 10895]
gi|374108926|gb|AEY97832.1| FAFR149Cp [Ashbya gossypii FDAG1]
Length = 220
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 36/189 (19%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ ++D +LD+II S+KK R R + R + SV+ GR RRGP + R
Sbjct: 1 MSANLDKALDEIIDSQKKPVR-------RPNKNAPRKVAKSVTAGR-----RRGPAAGVR 48
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF- 119
++ P + RA + TK+ V L + D +R+ F
Sbjct: 49 -------------KSVPVE--------RATSMLEAAYATKVNVEGLPRDIKEDAVRDFFR 87
Query: 120 SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG--KPMKIEVVGTN 177
S +G L+R + +++ G +G A + +A A A+K++N +DG +++ ++
Sbjct: 88 SSVGGLQRVLLSYNERGNSTGMATLTFANAEKAREAVKKFNGAPIDGGKSRLRLNLIVDP 147
Query: 178 AEIPLQARV 186
PL AR+
Sbjct: 148 TRKPLAARI 156
>gi|449523896|ref|XP_004168959.1| PREDICTED: THO complex subunit 4-like [Cucumis sativus]
Length = 114
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 201 MTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGR 260
+ S SG + +N PG RGGL R+++GRGRG GG GGG
Sbjct: 27 IVSESGRNATSNVVNSFPGP-SHRGGL-RNARGRGRGAWSRGVGLGGGSGGGRGRGRGRG 84
Query: 261 GRGQGKKNPVDKSADDLDKELDNYHAEAMQ 290
KK PV+KS+D+LDKEL+NYHAEAMQ
Sbjct: 85 RGQGRKK-PVEKSSDELDKELENYHAEAMQ 113
>gi|149240497|ref|XP_001526124.1| hypothetical protein LELG_02682 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450247|gb|EDK44503.1| hypothetical protein LELG_02682 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 224
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D SLDDII S KK+ + R R G G + + G ++T + P +
Sbjct: 1 MSASLDKSLDDIISSSKKTFKSR-----RPGAKVGAKSNQNKVGKKLTNGKAKKPAT--- 52
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF- 119
S+ K+ DL TK+ V+ L + +D++RE F
Sbjct: 53 -VSFNKPKAAAAVAAAAPAIDL-------------SYATKVNVTGLPRDLKHDNVREFFQ 98
Query: 120 SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP--MKIEVVGTN 177
S+IG + + + +++ G G A +++ +A A+++YN +DG +K+E++
Sbjct: 99 SQIGGVNKVDMSYNEKGLFKGYATIIFKSSKNAALAVEKYNGASIDGGAGKLKLELIIDT 158
Query: 178 AEIPLQARVNVTGVNGRR 195
++ PL AR+ V R
Sbjct: 159 SKKPLAARITAKPVQQVR 176
>gi|70998152|ref|XP_753805.1| RNA binding protein [Aspergillus fumigatus Af293]
gi|66851441|gb|EAL91767.1| RNA binding protein, putative [Aspergillus fumigatus Af293]
gi|159126460|gb|EDP51576.1| RNA binding protein, putative [Aspergillus fumigatus A1163]
Length = 334
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 69/246 (28%)
Query: 87 LRAAGISGIEVGTKLYVSNLHPGVTNDDI--------RELFSEIGELKRYAIHFDKNGRP 138
+ A S G K+ V NLH +T D+ ++LF+ IG + ++ +D+ GR
Sbjct: 70 MAANSCSSAPAGAKIRVENLHYDITESDLELADEFSFQDLFNRIGPVSNLSLVYDRAGRS 129
Query: 139 SGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT-----------NAEIP---LQA 184
G A V Y R +DA A+ ++ G+P+++ +V + N E P L
Sbjct: 130 EGVAYVTYNRANDARTAIAEFDGANAKGQPIRLTLVASGPGRRGRNPFDNVERPKGSLFD 189
Query: 185 RVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRG----------------PGSQ------- 221
R+ R R++ S +G+ G A RG P +
Sbjct: 190 RIE----RPRDARSLSPGSENGDVEGGARRRRGRRSGGGAGHRRSDVSKPAPEHIDRYVP 245
Query: 222 GRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNP---VDKSADDLD 278
G+R +RRS+ GR +G+ R R RG+G++NP K+ ++LD
Sbjct: 246 GQRSPVRRSTNGRRQGE-----------------RRDDRNRGEGRRNPNARPKKTQEELD 288
Query: 279 KELDNY 284
+E+D+Y
Sbjct: 289 QEMDDY 294
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARR 149
G+S G +LYV +LH +T DI+++F GEL+ +H D GR G A V Y R
Sbjct: 389 GVSASHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRS 448
Query: 150 SDAFAALKRYNNVLLDGKPMKIEVV 174
DA AL++ L G+ +++ V
Sbjct: 449 EDARMALEQMEGFELAGRTLRVNTV 473
>gi|398405202|ref|XP_003854067.1| hypothetical protein MYCGRDRAFT_92083 [Zymoseptoria tritici IPO323]
gi|339473950|gb|EGP89043.1| hypothetical protein MYCGRDRAFT_92083 [Zymoseptoria tritici IPO323]
Length = 416
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Query: 73 TRNFPWQHDLFE--------------DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
TR W HD FE D A + G+K+ V N+H +T +D+REL
Sbjct: 130 TRRSDWVHDRFEGERYDRSQRHAPVEDDRYAPRGAATTGGSKIRVDNIHYELTENDLREL 189
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
F IG + + +D+ R G+A V+Y DA A+++++ +G+ +++ ++
Sbjct: 190 FERIGPVASVRLLYDRADRSQGTAFVIYEDPRDASDAVQQFDGQNANGQAIRMTLL 245
>gi|402222291|gb|EJU02358.1| hypothetical protein DACRYDRAFT_22031 [Dacryopinax sp. DJM-731 SS1]
Length = 238
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA+ +D SLDD+IKS+ + +R R A+ +G + AAR+ L +
Sbjct: 1 MASGLDKSLDDMIKSKPRPQRRRRVPTAKAAVLGA---GNLGAGAAVKAAARQAALPTPK 57
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF- 119
+ T+ ++ + R K+ VSNL V+ I+ELF
Sbjct: 58 AAEPTVTQAQQEAR-------------------------KIIVSNLPLDVSETQIKELFG 92
Query: 120 SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK-PMKIEVV 174
+ +G+ + + F+ G+ G A V + + D F A K YN L+D K PMKIE++
Sbjct: 93 TTVGKTREVNLAFNNKGQSKGIAHVTFTNKGDGFKAYKEYNGRLIDAKSPMKIELI 148
>gi|119176075|ref|XP_001240165.1| hypothetical protein CIMG_09786 [Coccidioides immitis RS]
gi|303318207|ref|XP_003069103.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108789|gb|EER26958.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320031722|gb|EFW13681.1| hypothetical protein CPSG_09720 [Coccidioides posadasii str.
Silveira]
gi|392864587|gb|EAS27519.2| RNA binding domain-containing protein [Coccidioides immitis RS]
Length = 240
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VS L V +I+E F + G +K+ + +++NG G A + +AR A A K
Sbjct: 67 SKIIVSGLPSDVNEANIKEYFHQSAGPVKKVMVTYNQNGTSRGIASITFARPDTAAKAAK 126
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIP 181
N +L+D +P+KIEVV A P
Sbjct: 127 ELNGLLIDKRPIKIEVVVDAARAP 150
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G LY+ NL + +D +RELFS G++ + D+NG GS V ++ R +A AL
Sbjct: 321 GLNLYLKNLDDSIGDDQLRELFSNFGKITSCKVMRDQNGLSKGSGFVAFSTREEASQALT 380
Query: 158 RYNNVLLDGKPMKI 171
N ++ GKP+ +
Sbjct: 381 EMNGKMISGKPLYV 394
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+++ NL + N + E FS G + + D+ G+ G V Y + A A+K N
Sbjct: 130 IFIKNLDKMIDNKSLHETFSSFGTILSCKVAMDEGGQSKGFGFVQYEKEEAAQNAIKSLN 189
Query: 161 NVLLDGKPMKI 171
+L++ KP+ +
Sbjct: 190 GMLINDKPVFV 200
>gi|449679895|ref|XP_002164621.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Hydra magnipapillata]
Length = 430
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
LYVSNL +T D + E FS+IG+LK+ + +++G+ G A V Y +DA +A+ + +
Sbjct: 275 LYVSNLPFEMTADQVTEHFSKIGKLKQVRLVTNRSGKSKGYAYVEYESEADAQSAIVKLD 334
Query: 161 NVLLDGKPMKIEV-------VGTNAEIPLQARVNVTGVNGRRKRTVVMT--SGSGNAGGA 211
V L+ +P+ + + + E + R N G+ GR K + M S N
Sbjct: 335 QVPLNDRPINVSLSNPPARKITVAHEDKQKVRSNEPGIRGRSKTQISMVPRSLQKNIPND 394
Query: 212 AAIN 215
++IN
Sbjct: 395 SSIN 398
>gi|302656180|ref|XP_003019846.1| hypothetical protein TRV_06134 [Trichophyton verrucosum HKI 0517]
gi|291183618|gb|EFE39222.1| hypothetical protein TRV_06134 [Trichophyton verrucosum HKI 0517]
Length = 276
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E G +YV NL N+D+ ELFS IG+++R I ++ NGR G+ V + +A A
Sbjct: 163 ERGVSIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEPNGRSRGTGVVQFDTADNAETA 222
Query: 156 LKRYNNVLLDGKPMKIEVV------GTNAEIPLQARVNVTG 190
+ ++ G+P+ + V + +P QA ++ G
Sbjct: 223 ISKFTGYQYGGRPLGLSFVKYVNPGQSQGPVPGQATTDLNG 263
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 86 SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVV 145
SL A + G+ VG L + + + ++ G + R +H D +GRP GS V
Sbjct: 4 SLTTASLIGMYVGKSLKILTI-----------VTAQQGAVVRADVHMDASGRPKGSGIVA 52
Query: 146 YARRSDAFAALKRYNNVLLDGKPMKI 171
+ DA A++++N G+P+++
Sbjct: 53 FESPDDARNAIQQFNGYEWQGRPLEV 78
>gi|395324948|gb|EJF57379.1| hypothetical protein DICSQDRAFT_111837 [Dichomitus squalens
LYAD-421 SS1]
Length = 235
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNG 136
W+ D R A S E G+K+ +S L V +++ LFS+ +G ++ + ++ G
Sbjct: 32 WRSDA-----RTASGSHSEGGSKILLSRLPADVEENEVEILFSKTVGPVREVLMVYNSQG 86
Query: 137 RPSGSAEVVYARRSDAFAALKRYNNVLLDG-KPMKIEVV 174
R G A V +AR +DA A +YN ++DG +P+KIE+V
Sbjct: 87 RSRGMAVVAFARPTDAAVARAKYNGKIVDGRRPIKIEIV 125
>gi|330913095|ref|XP_003296184.1| hypothetical protein PTT_05285 [Pyrenophora teres f. teres 0-1]
gi|311331880|gb|EFQ95720.1| hypothetical protein PTT_05285 [Pyrenophora teres f. teres 0-1]
Length = 481
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G E +YV NL +N+D+ ELF+ IG+++R I ++ NGR G+ V + + +DA
Sbjct: 374 AGGEPSNTIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEFEKAADA 433
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
++ ++ G+P+ + V
Sbjct: 434 ETSIAKFTGYQYGGRPLGLAYV 455
>gi|189191918|ref|XP_001932298.1| RNP domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973904|gb|EDU41403.1| RNP domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 468
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRS 150
+G E +YV NL +N+D+ ELF+ IG+++R I ++ NGR G+ V + + +
Sbjct: 359 ATAGGEPSNTIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEFEKAA 418
Query: 151 DAFAALKRYNNVLLDGKPMKIEVV 174
DA ++ ++ G+P+ + V
Sbjct: 419 DAETSIAKFTGYQYGGRPLGLAYV 442
>gi|327350509|gb|EGE79366.1| hypothetical protein BDDG_02305 [Ajellomyces dermatitidis ATCC
18188]
Length = 243
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 37/178 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +D SLDDI+ +R+ ARRG R R T A+R NA
Sbjct: 1 MADKLDKSLDDILSTRRA---------ARRGSQRRRD----------TRASRAS--QNAA 39
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG---TKLYVSNLHPGVTNDDIRE 117
P + K+ R + S A +G +G +K+ VS L V +I+E
Sbjct: 40 PVG-GVKKTVRNAK-----------STSKATPTGPSMGLGESKIIVSGLPSDVNEANIKE 87
Query: 118 LFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
F + G +K+ + +++NG G A + + R A A K N +L+D +P+KIEVV
Sbjct: 88 YFHKSAGPVKKVMLTYNQNGTSRGIAAITFVRPDTAAKAAKELNGLLIDKRPIKIEVV 145
>gi|452004844|gb|EMD97300.1| hypothetical protein COCHEDRAFT_1164036 [Cochliobolus
heterostrophus C5]
Length = 475
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSA 142
F D A G E +YV NL +N+D+ ELF+ IG+++R I ++ NGR G+
Sbjct: 362 FTDFATAGG----EPSNIIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTG 417
Query: 143 EVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
V + + +DA ++ ++ G+P+ + V
Sbjct: 418 VVEFEKAADAETSIAKFTGYQYGGRPLGLAYV 449
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YVSNL V D+++LF + G++ R +H +GRP GS V + DA A+
Sbjct: 214 QVYVSNLPYNVGWQDLKDLFRQAANNGQVLRADVHIAPDGRPKGSGVVAFETPEDARNAI 273
Query: 157 KRYNNVLLDGKPMKI 171
++N G+ +++
Sbjct: 274 TQFNGYDWQGRNLEV 288
>gi|59802913|gb|AAX07663.1| protein mlo3-like protein [Magnaporthe grisea]
Length = 258
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 90 AGISGIEVGTKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYAR 148
A SG +K+ VSN+ V+ I+E F + +G +KR I + G G A V +A
Sbjct: 61 AKASGAPGTSKVVVSNMPKDVSEAQIKEYFGQSVGPVKRVEISYGPGGVSRGIATVTFAH 120
Query: 149 RSDAFAALKRYNNVLLDGKPMKIEVVGTNA-EIP 181
A A N +L+D KP+K+EVV +A +IP
Sbjct: 121 ADGASKAFAELNGLLIDNKPVKVEVVVASADQIP 154
>gi|389623439|ref|XP_003709373.1| hypothetical protein MGG_06668 [Magnaporthe oryzae 70-15]
gi|351648902|gb|EHA56761.1| hypothetical protein MGG_06668 [Magnaporthe oryzae 70-15]
gi|440469538|gb|ELQ38646.1| RNA binding domain-containing protein [Magnaporthe oryzae Y34]
gi|440487243|gb|ELQ67047.1| RNA binding domain-containing protein [Magnaporthe oryzae P131]
Length = 258
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 90 AGISGIEVGTKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYAR 148
A SG +K+ VSN+ V+ I+E F + +G +KR I + G G A V +A
Sbjct: 61 AKASGAPGTSKVVVSNMPKDVSEAQIKEYFGQSVGPVKRVEISYGPGGVSRGIATVTFAH 120
Query: 149 RSDAFAALKRYNNVLLDGKPMKIEVVGTNA-EIP 181
A A N +L+D KP+K+EVV +A +IP
Sbjct: 121 ADGASKAFAELNGLLIDNKPVKVEVVVASADQIP 154
>gi|453084886|gb|EMF12930.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 490
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E ++V NL +N+D+ ELF IG ++R I ++ NGR GS V ++ SDA
Sbjct: 387 SGGEANPIIHVKNLPWSTSNEDLVELFQTIGTVERAEIQYEPNGRSRGSGVVQFSNTSDA 446
Query: 153 FAALKRYNNVLLDGKPMKIE 172
+++++ G+P+ ++
Sbjct: 447 QTSIEKFQGYQYGGRPLGLD 466
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
++++VSNL V D+++LF + G + R +H ++G P GS V + DA A+
Sbjct: 218 SQIFVSNLPYQVGWQDLKDLFRQAGNVIRADVHLGQDGNPKGSGVVAFETPDDAQNAINT 277
Query: 159 YNNVLLDGKPMKI 171
+N G+P+++
Sbjct: 278 FNGYDWQGRPLEV 290
>gi|70992519|ref|XP_751108.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|66848741|gb|EAL89070.1| RNP domain protein [Aspergillus fumigatus Af293]
Length = 480
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E G +YV NL NDD+ +LFS IG+++R I ++ NGR G+ V + A
Sbjct: 371 SGGEKGPIIYVRNLPWSTCNDDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVQFDNAETA 430
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ I V
Sbjct: 431 ETAIAKFTGYQYGGRPLGITFV 452
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+LYVSNL V D+++LF ++ G + R +H D GRP GS V + DA A+
Sbjct: 222 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFESPEDARNAI 281
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 282 QQFNGYDWQGRTLEV 296
>gi|159124680|gb|EDP49798.1| RNP domain protein [Aspergillus fumigatus A1163]
Length = 480
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E G +YV NL NDD+ +LFS IG+++R I ++ NGR G+ V + A
Sbjct: 371 SGGEKGPIIYVRNLPWSTCNDDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVQFDNAETA 430
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ I V
Sbjct: 431 ETAIAKFTGYQYGGRPLGITFV 452
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+LYVSNL V D+++LF ++ G + R +H D GRP GS V + DA A+
Sbjct: 222 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFESPEDARNAI 281
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 282 QQFNGYDWQGRTLEV 296
>gi|350632863|gb|EHA21230.1| hypothetical protein ASPNIDRAFT_125514 [Aspergillus niger ATCC
1015]
Length = 259
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 98 GTKLYVSNLHPGVTNDD-----IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
G KL V N+H +T D I +LF+ IG + ++ +D+ GR G A V Y DA
Sbjct: 6 GAKLRVENIHYDITETDLEVGLIPDLFTRIGPISNVSLVYDRAGRSEGVAFVTYTHIGDA 65
Query: 153 FAALKRYNNVLLDGKPMKIEVVGTNA 178
A++ ++ G+P+++ ++ T A
Sbjct: 66 RTAIREFDGANAKGQPIRLTLISTGA 91
>gi|451853414|gb|EMD66708.1| hypothetical protein COCSADRAFT_158789 [Cochliobolus sativus
ND90Pr]
Length = 477
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSA 142
F D A G E +YV NL +N+D+ ELF+ IG+++R I ++ NGR G+
Sbjct: 364 FTDFATAGG----EPSNIIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTG 419
Query: 143 EVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
V + + +DA ++ ++ G+P+ + V
Sbjct: 420 VVEFEKAADAETSIAKFTGYQYGGRPLGLAYV 451
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YVSNL V D+++LF + G++ R +H +GRP GS V + DA A+
Sbjct: 212 QVYVSNLPYNVGWQDLKDLFRQAANNGQVLRADVHIAPDGRPKGSGVVAFETPEDARNAI 271
Query: 157 KRYNNVLLDGKPMKI 171
++N G+ +++
Sbjct: 272 TQFNGYDWQGRNLEV 286
>gi|189189852|ref|XP_001931265.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972871|gb|EDU40370.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 253
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
TK+ VSNL + ++E F +G K+ + +D GR GSA V++ R A A
Sbjct: 69 TKIMVSNLPRDIDQVQLQEYFVSAVGVGRPKKVLLQYDAAGRSVGSATVIFNRHDQATKA 128
Query: 156 LKRYNNVLLDGKPMKIEVVGTNAEIPLQAR 185
+ V +DG+P+++E++ + + IP R
Sbjct: 129 TAALDGVKIDGRPVRVEILVSASAIPATTR 158
>gi|148664444|gb|EDK96860.1| mCG1031583 [Mus musculus]
Length = 126
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 126 KRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI---PL 182
K+ A+++D++GR G+A + + R++D A+++YN LDG PM I++V + + P
Sbjct: 1 KKSAVYYDRSGRSLGTAHLHFERKADGLKAMRQYNGASLDGCPMNIQLVTSQIDTQRRPA 60
Query: 183 QAR 185
Q+R
Sbjct: 61 QSR 63
>gi|353241951|emb|CCA73730.1| hypothetical protein PIIN_07685 [Piriformospora indica DSM 11827]
Length = 239
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 78/193 (40%), Gaps = 36/193 (18%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYA-IHFDKNGRPSGSAEVVYARRSDAFAALK 157
T+L V NLH VT D+ LF G + I FDK+GR +GS V + DA AA K
Sbjct: 51 TRLLVDNLHYEVTEKDLATLFGVYGPFAKPPRIRFDKSGRSTGSGTVTFENMDDAKAAQK 110
Query: 158 RYNNVLLDGKPMKIEV---VGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAI 214
N L G+ + I G+NA L AR++ G K + S I
Sbjct: 111 ALNKQLAKGQELAIRFDHQSGSNASS-LLARLD----KGSTKPLASRLADSPKGTTGEPI 165
Query: 215 NRGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSA 274
RG G R G R + R + + K P+ +A
Sbjct: 166 VRGVGPHRRGRGGARGAANTPREK-------------------------RPHKKPL--TA 198
Query: 275 DDLDKELDNYHAE 287
DDLDKELD Y A+
Sbjct: 199 DDLDKELDQYGAQ 211
>gi|380490600|emb|CCF35903.1| RNA recognition domain-containing protein containing protein
[Colletotrichum higginsianum]
Length = 291
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VSNL V I+E F + +G +KR I + N G A + + A A +
Sbjct: 71 SKVIVSNLPKDVNEQQIKEYFITSVGPIKRVEISYGPNSVSRGIANITFREPDGASKAFQ 130
Query: 158 RYNNVLLDGKPMKIEVV 174
+ N +L+D +P+KIE+V
Sbjct: 131 KLNGLLVDNRPIKIEIV 147
>gi|83764541|dbj|BAE54685.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 308
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E G +YV NL N+D+ +LFS IG++ R I ++ NGR G+ V + A
Sbjct: 199 SGGEKGPVIYVRNLPWSTCNEDLVDLFSTIGKVDRAEIQYEPNGRSRGTGVVQFDNAETA 258
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ I V
Sbjct: 259 ETAIAKFTGYQYGGRPLGITFV 280
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+LYVSN D+++LF ++ G + R +H D GRP GS V + DA A+
Sbjct: 50 QLYVSN--------DLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFESPEDARNAI 101
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 102 QQFNGYDWQGRALEV 116
>gi|268536662|ref|XP_002633466.1| C. briggsae CBR-ALY-3 protein [Caenorhabditis briggsae]
Length = 240
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 46/184 (25%)
Query: 2 ATHVDMSLDDII-KSRK--KSERERGQGRARRGRGRGRGP---SGSVSGGRMTGAARRGP 55
A +VDMSLDDII K+RK S +++ RRG GR G SG SGG
Sbjct: 4 ANNVDMSLDDIISKTRKTNSSIQKKPFSGNRRGNGRPSGIPRRSGGSSGG---------- 53
Query: 56 LSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLY---VSNLHPGVTN 112
W+ DL D++ GI+ +K+ +SNL V +
Sbjct: 54 ----------------------WR-DL--DAVSNHGITSRGNDSKIIRVNISNLATTVIS 88
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
D+ ELF + +L +++F+++G G+ ++ A+R DA +++Y+ V LDGK MK
Sbjct: 89 SDLEELFGDY-KLHSVSVNFNEHGESLGTGDISLAKR-DADRLVQKYSGVALDGKMMKFA 146
Query: 173 VVGT 176
V+ +
Sbjct: 147 VIDS 150
>gi|302497555|ref|XP_003010778.1| hypothetical protein ARB_03480 [Arthroderma benhamiae CBS 112371]
gi|291174321|gb|EFE30138.1| hypothetical protein ARB_03480 [Arthroderma benhamiae CBS 112371]
Length = 298
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E G +YV NL N+D+ ELFS IG+++R I ++ NGR G+ V + +A A
Sbjct: 185 ERGVSIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEPNGRSRGTGVVQFDTADNAETA 244
Query: 156 LKRYNNVLLDGKPMKIEVV 174
+ ++ G+P+ + V
Sbjct: 245 ISKFTGYQYGGRPLGLSFV 263
>gi|315054029|ref|XP_003176389.1| hypothetical protein MGYG_00478 [Arthroderma gypseum CBS 118893]
gi|311338235|gb|EFQ97437.1| hypothetical protein MGYG_00478 [Arthroderma gypseum CBS 118893]
Length = 435
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E G +YV NL N+D+ ELFS IG+++R I ++ NGR G+ V + +A A
Sbjct: 322 ERGISIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEPNGRSRGTGVVQFDTADNAETA 381
Query: 156 LKRYNNVLLDGKPMKIEVV 174
+ ++ G+P+ + V
Sbjct: 382 ISKFTGYQYGGRPLGLSFV 400
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF ++ G + R +H D +GRP GS V + DA A+
Sbjct: 163 QIYVANLPYNVGWQDLKDLFRQATQQGAVVRADVHMDASGRPKGSGIVAFESPDDARNAI 222
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 223 QQFNGYEWQGRLLEV 237
>gi|342875527|gb|EGU77271.1| hypothetical protein FOXB_12231 [Fusarium oxysporum Fo5176]
Length = 251
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VSNL V+ I+E F + +G +KR + + N + G A V + + A A +
Sbjct: 68 SKIIVSNLPKDVSEQQIKEYFIQSVGPIKRVELSYGPNSQSRGIANVTFHKSDGASKAFQ 127
Query: 158 RYNNVLLDGKPMKIEVV 174
+ N +L+D +P+KIE+V
Sbjct: 128 KLNGLLVDNRPIKIEIV 144
>gi|407915850|gb|EKG09360.1| hypothetical protein MPH_13626 [Macrophomina phaseolina MS6]
Length = 218
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+YV NL +N+D+ ELF+ IG+++R I ++ NGR G+ V + +A A+ ++
Sbjct: 119 IYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEFDTAENAETAISKFT 178
Query: 161 NVLLDGKPMKIEVVG-TNAEIPLQA 184
G+P+ + V TN + P A
Sbjct: 179 GYQYGGRPLGLSFVKYTNVQAPTDA 203
>gi|400593014|gb|EJP61025.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 481
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E +YV NL +NDD+ ELF+ IG++++ I ++ +GR GS V + A
Sbjct: 375 SGTERSEIIYVRNLPWSTSNDDLIELFTTIGKVEQAEIQYEPSGRSRGSGVVKFDTAETA 434
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ I V
Sbjct: 435 ETAISKFQGYQYGGRPLNISFV 456
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF + G + R +H +GRP GS VV+ DA +A+
Sbjct: 220 QIYVANLPFNVGWQDLKDLFRQAARNGGVIRADVHSGPDGRPKGSGIVVFESPDDARSAI 279
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 280 QQFNGYDWQGRTIEV 294
>gi|255577432|ref|XP_002529595.1| RNA binding motif protein, putative [Ricinus communis]
gi|223530928|gb|EEF32787.1| RNA binding motif protein, putative [Ricinus communis]
Length = 217
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALK 157
+ +YVSNL +TN D+ LFS G++ R + DK R S G A + + R DA +A K
Sbjct: 51 STVYVSNLDYSLTNSDLHTLFSTFGKIARVTVLKDKQSRQSKGVAFIQFVSRDDAVSAAK 110
Query: 158 RYNNVLLDGKPMKIEVVGTN 177
+ + +L+G+ + + N
Sbjct: 111 QMDKKILNGRTLSASIASDN 130
>gi|300120403|emb|CBK19957.2| unnamed protein product [Blastocystis hominis]
Length = 252
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 20/193 (10%)
Query: 4 HVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSS 63
+++M LD+II ++ ++ +R + + + R G GR ++ N R +
Sbjct: 13 YINMGLDEIISRKRSNQIKRNKNQMKFNRDSVIRKPGVAYRGRNDYVKQQLNNRNGRSAR 72
Query: 64 YTIAK-SFRRTRNFP--WQHDLFEDSLRAAGIS-------------GIEVGTKLYVSNLH 107
+ RR+RN W+HD F + A + EV T+++ L
Sbjct: 73 MMQNRIQDRRSRNMEGNWKHDRFSGRAQGAALPQQPAPQRIAPAPVTFEVATQVFFGGLD 132
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
P V D + +LF + + + D G+ V Y+ R+DA A++ ++N LD
Sbjct: 133 PSVDRDVLEKLFGSVPNMVSILMDTDSENHFKGTGAVTYSNRTDAEKAIQTFDNQRLDCN 192
Query: 168 ----PMKIEVVGT 176
M++ ++GT
Sbjct: 193 GISMTMRVRMIGT 205
>gi|281202262|gb|EFA76467.1| RNA recognition motif-containing protein RRM [Polysphondylium
pallidum PN500]
Length = 270
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 47 MTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFE-----DSLRAAG--ISGIEVGT 99
T R+G L + S R + + LFE +SL G I IE G
Sbjct: 26 FTSDLRKGVLPKKVMKGRGVIDSIERDQRYAGDSGLFESLNQDESLIKPGEPIKSIE-GW 84
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAALKR 158
+ V+N+H D+R+LF E G ++ +++D + G G A + Y + S+A AA+K
Sbjct: 85 IVVVTNIHDEAQESDLRDLFCEYGAIRNMHLNYDRRTGFTKGYALIEYEQESEASAAIKE 144
Query: 159 YNNVLLDGKPMKIEV-----VGTNAEIPLQARVNVTGVNGRR 195
+ L GKP+ ++ V T +Q R TG GRR
Sbjct: 145 SEKIELAGKPLTVDFAFVQSVDTTPTHTIQLRSTRTG--GRR 184
>gi|259145620|emb|CAY78884.1| Yra1p [Saccharomyces cerevisiae EC1118]
Length = 226
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 117/292 (40%), Gaps = 76/292 (26%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPS---GSVSGGRMTGAARRGPL- 56
M+ ++D SLD+II S K G RAR G RG GP V R + RRGP+
Sbjct: 1 MSANLDKSLDEIIGSNKA-----GNNRARVGGTRGNGPRRVGKQVGSQRRSLPNRRGPIR 55
Query: 57 SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
N R +A R A + K+ V L + D +R
Sbjct: 56 KNTRAPPNAVA--------------------RVAKLLDTTREVKVNVEGLPRDIKQDAVR 95
Query: 117 ELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG--KPMKIEV 173
E F S++G ++R + +++ G+ +G A + + A A++R+N +DG +++ +
Sbjct: 96 EFFASQVGGVQRVLLSYNERGQSTGMANITFKNGELARRAVERFNGSPIDGGRSRLRLNL 155
Query: 174 VGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQG 233
+ + P+++ + R M GNA + RGP R+++
Sbjct: 156 IVDPNQRPVKSLAD---------RIKAMPQKGGNA--PRPVKRGPN--------RKAAMA 196
Query: 234 RGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYH 285
+ + + + ++ P KS +DLDKE+ +Y
Sbjct: 197 KSQNKPK-------------------------REKPAKKSLEDLDKEMADYF 223
>gi|330906141|ref|XP_003295370.1| hypothetical protein PTT_00586 [Pyrenophora teres f. teres 0-1]
gi|311333412|gb|EFQ96540.1| hypothetical protein PTT_00586 [Pyrenophora teres f. teres 0-1]
Length = 167
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
TK+ VSNL + +++ F +G K+ + +D GR GSA V++ R A A
Sbjct: 69 TKIMVSNLPRDIDQVQLQDYFVSAVGVGRPKKVLLQYDAAGRSVGSATVIFNRHDQATKA 128
Query: 156 LKRYNNVLLDGKPMKIEVVGTNAEIPLQAR 185
+ V +DG+P+++E++ + + IP R
Sbjct: 129 TAALDGVKIDGRPVRVEILVSASAIPATTR 158
>gi|6320589|ref|NP_010669.1| Yra1p [Saccharomyces cerevisiae S288c]
gi|3123158|sp|Q12159.2|YRA1_YEAST RecName: Full=RNA annealing protein YRA1
gi|1912464|gb|AAC09951.1| RNA annealing protein Yra1p [Saccharomyces cerevisiae]
gi|151942355|gb|EDN60711.1| RNA-binding RNA annealing protein [Saccharomyces cerevisiae YJM789]
gi|190404682|gb|EDV07949.1| RNA annealing protein YRA1 [Saccharomyces cerevisiae RM11-1a]
gi|285811400|tpg|DAA12224.1| TPA: Yra1p [Saccharomyces cerevisiae S288c]
gi|349577433|dbj|GAA22602.1| K7_Yra1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 226
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 117/292 (40%), Gaps = 76/292 (26%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPS---GSVSGGRMTGAARRGPL- 56
M+ ++D SLD+II S K G RAR G RG GP V R + RRGP+
Sbjct: 1 MSANLDKSLDEIIGSNKA-----GSNRARVGGTRGNGPRRVGKQVGSQRRSLPNRRGPIR 55
Query: 57 SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
N R +A R A + K+ V L + D +R
Sbjct: 56 KNTRAPPNAVA--------------------RVAKLLDTTREVKVNVEGLPRDIKQDAVR 95
Query: 117 ELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG--KPMKIEV 173
E F S++G ++R + +++ G+ +G A + + A A++R+N +DG +++ +
Sbjct: 96 EFFASQVGGVQRVLLSYNERGQSTGMANITFKNGELARRAVERFNGSPIDGGRSRLRLNL 155
Query: 174 VGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQG 233
+ + P+++ + R M GNA + RGP R+++
Sbjct: 156 IVDPNQRPVKSLAD---------RIKAMPQKGGNA--PRPVKRGPN--------RKAAMA 196
Query: 234 RGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYH 285
+ + + + ++ P KS +DLDKE+ +Y
Sbjct: 197 KSQNKPK-------------------------REKPAKKSLEDLDKEMADYF 223
>gi|345559854|gb|EGX42985.1| hypothetical protein AOL_s00215g771 [Arthrobotrys oligospora ATCC
24927]
Length = 251
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 32/187 (17%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA+++D SLD+I+K +K G ARR R GP+ R
Sbjct: 1 MASNLDRSLDEILKDKK--------GDARRNNKRA------------------GPVGGIR 34
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
S I ++ ++ + + G TK+ VSNL V +RE F+
Sbjct: 35 KRSARIEQNKKKAAAATPTGPAKKADTKKDG-----NDTKIQVSNLPLDVNESMLREYFT 89
Query: 121 E-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
+G +K+ + + NG+ +G A + + + A A ++N L+D +PMK+E++ +
Sbjct: 90 NVVGTIKKCNLVYKANGQSAGIATIEFHKPGHANIAFDKFNGRLVDNRPMKVEIIVDPTK 149
Query: 180 IPLQARV 186
+ R+
Sbjct: 150 VAFADRI 156
>gi|320590561|gb|EFX03004.1| small subunit of nuclear cap-binding protein complex [Grosmannia
clavigera kw1407]
Length = 218
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
Query: 60 RPSSYTIAKSFRRTRN------FPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTND 113
RPS+Y K RR + P + +D LR A T LYV NL T +
Sbjct: 16 RPSAYFNNKKRRRDNHGRGEDEVPDKPQAIDDPLRNA--------TTLYVGNLSFYTTEE 67
Query: 114 DIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIE 172
+ ELFS+ GE+KR + D+ N P G V Y DA +K LD + ++ +
Sbjct: 68 QVYELFSKCGEIKRLVMGLDRFNKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTD 127
Query: 173 V 173
+
Sbjct: 128 L 128
>gi|121700040|ref|XP_001268285.1| RNP domain protein [Aspergillus clavatus NRRL 1]
gi|119396427|gb|EAW06859.1| RNP domain protein [Aspergillus clavatus NRRL 1]
Length = 419
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E +YV NL NDD+ +LFS IG+++R I ++ NGR G+ V + A
Sbjct: 310 SGGEKSPVIYVRNLPWSTCNDDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVQFDNEETA 369
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ I V
Sbjct: 370 ETAIAKFTGYQYGGRPLGITFV 391
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+L+VSNL V D+++LF ++ G + R +H D GRP GS V + DA A+
Sbjct: 159 QLFVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFESPDDARTAI 218
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 219 QQFNGYDWQGRTLEV 233
>gi|119472580|ref|XP_001258373.1| RNP domain protein [Neosartorya fischeri NRRL 181]
gi|119406525|gb|EAW16476.1| RNP domain protein [Neosartorya fischeri NRRL 181]
Length = 463
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRS 150
SG E +YV NL NDD+ +LFS IG+++R I ++ NGR G+ V +
Sbjct: 352 ATSGGEKSPIIYVRNLPWSTCNDDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVQFDNAE 411
Query: 151 DAFAALKRYNNVLLDGKPMKIEVV 174
A A+ ++ G+P+ I V
Sbjct: 412 TAETAIAKFTGYQYGGRPLGITFV 435
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYVSNL V D+++LF + G + R +H D GRP GS V + DA A++++
Sbjct: 207 QLYVSNLPFNVGWQDLKDLFRQAGAVIRADVHTDATGRPKGSGIVAFESPEDARNAIQQF 266
Query: 160 NNVLLDGKPMKI 171
N G+ +++
Sbjct: 267 NGYDWQGRTLEV 278
>gi|443895426|dbj|GAC72772.1| uncharacterized protein PANT_7d00265 [Pseudozyma antarctica T-34]
Length = 265
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 23/121 (19%)
Query: 78 WQHDLFEDSLRA------------------AGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
W+HD ++++ A A + ++ KL++ NL V+ D++ LF
Sbjct: 41 WKHDRYDENASARGPRRAGSGRPLSFPRDPAETNEVKATGKLFIENLQWDVSEQDLKTLF 100
Query: 120 SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAE 179
+IG + + I +D++ R +G A VVY + A A Y DG K +V+ E
Sbjct: 101 EQIGPVAKAYIKYDRSDRSTGRAVVVYDNPNHALQAKNEY-----DGAKAKGQVISITQE 155
Query: 180 I 180
+
Sbjct: 156 M 156
>gi|358057799|dbj|GAA96301.1| hypothetical protein E5Q_02967 [Mixia osmundae IAM 14324]
Length = 246
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 78 WQHDLFEDSL----RAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY-AIHF 132
W+HD F+ R A G ++L + NLH V+ ++ LF++IG L +I F
Sbjct: 43 WKHDRFDQPRFNRDREAASDGA-TSSRLRIDNLHYEVSERELEALFTQIGPLATPPSIGF 101
Query: 133 DKNGRPSGSAEVVYARRSDAFAALKRYN 160
D++GR G A V Y DA A+K++N
Sbjct: 102 DRSGRSLGWARVAYESEDDAATAIKQFN 129
>gi|321260885|ref|XP_003195162.1| hypothetical protein CGB_G2160W [Cryptococcus gattii WM276]
gi|317461635|gb|ADV23375.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 203
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 34/171 (19%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D LD+II ++ K R R G R G G +G+ +G R A+
Sbjct: 7 IDRPLDEIIATKAKPRRPRQGGAGARRGGTASGATGA-TGARARYAS------------- 52
Query: 65 TIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF-SEIG 123
T+ K+ + P+ ++F K+ +SNL VT+ +R+L S +G
Sbjct: 53 TVPKTVAAPQ--PFSAEVF----------------KIIISNLPSDVTDAAVRDLMQSTVG 94
Query: 124 ELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK-PMKIEV 173
+K + + G+ +G A VV+ + DA A Y+N ++D + PMK+E+
Sbjct: 95 PVKSVQMSYTATGKSTGIATVVFKNKGDARKAHASYHNRMIDNQRPMKVEL 145
>gi|222629159|gb|EEE61291.1| hypothetical protein OsJ_15377 [Oryza sativa Japonica Group]
Length = 613
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSA 142
FE S++ A + G LY+ NL + +D + ELFS G++ I D NG GS
Sbjct: 306 FEQSMKDA--ADKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKGSG 363
Query: 143 EVVYARRSDAFAALKRYNNVLLDGKPMKI 171
V ++ R +A AL N ++ GKP+ +
Sbjct: 364 FVAFSTREEASQALTEMNGKMISGKPLYV 392
>gi|408390271|gb|EKJ69675.1| hypothetical protein FPSE_10159 [Fusarium pseudograminearum CS3096]
Length = 253
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VSNL V+ I++ F + +G +KR + + N + G A V + + A A +
Sbjct: 68 SKIIVSNLPKDVSEQQIKDYFIQSVGPIKRVELVYGPNSQSRGVANVTFHKSDGASKAFQ 127
Query: 158 RYNNVLLDGKPMKIEVV 174
+ N +L+D +P+KIE+V
Sbjct: 128 KLNGLLVDNRPIKIEIV 144
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H +T DD+ +F GEL+ + D+ GR G A V +A A AL++
Sbjct: 266 RLYVGNVHFSITEDDLTNVFEPFGELEFVQLQKDETGRSKGYAFVQFANPEQARDALEKM 325
Query: 160 NNVLLDGKPMKI 171
N L G+ +++
Sbjct: 326 NGFELAGRAIRV 337
>gi|46138631|ref|XP_391006.1| hypothetical protein FG10830.1 [Gibberella zeae PH-1]
Length = 253
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VSNL V+ I++ F + +G +KR + + N + G A V + + A A +
Sbjct: 68 SKIIVSNLPKDVSEQQIKDYFIQSVGPIKRVELVYGPNSQSRGVANVTFHKSDGASKAFQ 127
Query: 158 RYNNVLLDGKPMKIEVV 174
+ N +L+D +P+KIE+V
Sbjct: 128 KLNGLLVDNRPIKIEIV 144
>gi|443898591|dbj|GAC75925.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 593
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 88 RAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYA 147
R++G + +++V NL +N+D+ ELF G++ I F + GR G V +A
Sbjct: 470 RSSGPTPTAPSQQIFVKNLPWSTSNEDLVELFQTTGKVDEAEIMF-EGGRSKGCGVVQFA 528
Query: 148 RRSDAFAALKRYNNVLLDGKPMKI 171
DA A+ ++NN + G+P++I
Sbjct: 529 SVQDAETAIAKFNNYVYGGRPLEI 552
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
T+L++ NL + D+++LF G + R I+ +GR G+ V +A +DA A+
Sbjct: 299 TQLFIGNLPYETSWQDLKDLFRSAGNVTRADINMGPDGRSKGTGIVAFANSNDASNAIAM 358
Query: 159 YNNVLLDGKPMKIEV 173
Y+N G+ +++ +
Sbjct: 359 YHNYDFKGRQLEVRL 373
>gi|324507842|gb|ADY43315.1| RNA-binding protein 39 [Ascaris suum]
Length = 618
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
KLY+ LH +T D +R +F G++ I D +G G A V + DA A+++
Sbjct: 353 KLYIGQLHTSITEDMLRRIFEPFGKIDTLEIATDLSGVSKGYAYVTFRHADDAKRAMEQM 412
Query: 160 NNVLLDGKPMKIEVVGTNAEIPLQAR 185
N L G+PMK+ V + E+P Q +
Sbjct: 413 NGFELAGRPMKVGTVDGD-EVPSQPQ 437
>gi|116791485|gb|ABK25999.1| unknown [Picea sitchensis]
Length = 235
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R F + FE +LR + +YV NL T + + ELFS GE+K+ +
Sbjct: 15 RDRRFNGTQEEFEHALRTS--------ITVYVGNLSFYTTEEQVYELFSRAGEVKKLIMG 66
Query: 132 FDKNGR-PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
DKN + P G V++ R D A+K + +LD + ++++
Sbjct: 67 LDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRSIRVDF 109
>gi|425774301|gb|EKV12610.1| RNA binding protein, putative [Penicillium digitatum Pd1]
gi|425776302|gb|EKV14524.1| RNA binding protein, putative [Penicillium digitatum PHI26]
Length = 345
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 34/134 (25%)
Query: 75 NFPWQHDLFEDSLRAAG-----------ISGIEVGTKLYVSNLHPGVTNDDI-------- 115
N W HD F+D I TK+ V NLH +T D+
Sbjct: 53 NLDWVHDKFDDDRSRPSRGGRRGRDGPDIDRSSTLTKVRVENLHYDITETDLEVGFNCPI 112
Query: 116 ---------------RELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
++LF IG + + +D+ GR G A + YAR DA +++ Y+
Sbjct: 113 LNTHARAPLTNFFAEQDLFGRIGPVSELTVSYDRAGRSEGVAYITYARLKDAHTSIQEYD 172
Query: 161 NVLLDGKPMKIEVV 174
G+P+++ ++
Sbjct: 173 GANAKGQPIRLSLI 186
>gi|367035268|ref|XP_003666916.1| hypothetical protein MYCTH_2316574 [Myceliophthora thermophila ATCC
42464]
gi|347014189|gb|AEO61671.1| hypothetical protein MYCTH_2316574 [Myceliophthora thermophila ATCC
42464]
Length = 254
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VSNL V+ I+E F + +G +K+ I + G G A V + A A
Sbjct: 70 SKIVVSNLPKDVSEGQIKEYFQQSVGPVKKVEISYGPGGVSRGIAHVTFHHADGASKAFS 129
Query: 158 RYNNVLLDGKPMKIEVVGTNAEI 180
N +L+DGKP+K+E+V +A++
Sbjct: 130 NLNGLLIDGKPVKVEIVVASADL 152
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
KLY+ LH +T D +R +F G++ I D +G G A V + DA A+++
Sbjct: 270 KLYIGQLHTSITEDMLRRIFEPFGKIDTLEIATDLSGVSKGYAYVTFRHADDAKRAMEQM 329
Query: 160 NNVLLDGKPMKIEVVGTNAEIPLQAR 185
N L G+PMK+ V + E+P Q +
Sbjct: 330 NGFELAGRPMKVGTVDGD-EVPSQPQ 354
>gi|237838419|ref|XP_002368507.1| hypothetical protein TGME49_091330 [Toxoplasma gondii ME49]
gi|211966171|gb|EEB01367.1| hypothetical protein TGME49_091330 [Toxoplasma gondii ME49]
gi|221484220|gb|EEE22516.1| RNA and export factor binding protein, putative [Toxoplasma gondii
GT1]
gi|221505796|gb|EEE31441.1| RRM domain-containing protein [Toxoplasma gondii VEG]
Length = 228
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNV 162
VSNL V +D++ELF+ +GE+ + I +D+ R G+ ++ DA A++ Y
Sbjct: 122 VSNLDYSVLEEDLKELFAAVGEVVKVWIDYDRTDRSKGTGGCIFRSVFDAKRAIEVYEGR 181
Query: 163 LLDGKPMKIEV 173
L+G P+++E+
Sbjct: 182 RLEGLPLRLEL 192
>gi|391870089|gb|EIT79277.1| hypothetical protein Ao3042_04344 [Aspergillus oryzae 3.042]
Length = 432
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E G +YV NL N+D+ +LFS IG++ R I ++ NGR G+ V + A
Sbjct: 323 SGGEKGPVIYVRNLPWSTCNEDLVDLFSTIGKVDRAEIQYEPNGRSRGTGVVQFDNAETA 382
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ I V
Sbjct: 383 ETAIAKFTGYQYGGRPLGITFV 404
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+LYVSNL V D+++LF ++ G + R +H D GRP GS V + DA A+
Sbjct: 166 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFESPEDARNAI 225
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 226 QQFNGYDWQGRALEV 240
>gi|388582355|gb|EIM22660.1| hypothetical protein WALSEDRAFT_59875 [Wallemia sebi CBS 633.66]
Length = 237
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 114/280 (40%), Gaps = 61/280 (21%)
Query: 7 MSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSYTI 66
MSLDDI+K +K S G G RRG + RG G R +++P+ Y
Sbjct: 1 MSLDDIVKKKKTS----GAGFKRRGSAKPRG------GFRKQHG-------HSKPAEYRS 43
Query: 67 AKSF--RRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGE 124
+ SF R T N P E AG E ++ ++N+H ++ + + +F+ +
Sbjct: 44 STSFSKRPTTNRPR-----EPRQPPAG----ERENQIKMTNVHYEISEEMLGNIFNGY-Q 93
Query: 125 LKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQA 184
+ + I +DK+GR +G A V + DA A++ +N + + +E G P
Sbjct: 94 VTKLRIRYDKSGRSTGEAIVAFESSEDADRAIEEFNGKTAKDQIINVEPYGYFTVDPPSH 153
Query: 185 RVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQGRGRGQGQGRGR 244
+G N +GS + + +N GP G R + R S + + + G +
Sbjct: 154 AGASSGDN----------AGSLLSRLGSKVNPGPVPTGPRAQISRRSVKQSKPKKAGFNK 203
Query: 245 GRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNY 284
+ P K AD LDKELD +
Sbjct: 204 PK----------------------PAPKDADSLDKELDEF 221
>gi|261203825|ref|XP_002629126.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239586911|gb|EEQ69554.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|327356167|gb|EGE85024.1| hypothetical protein BDDG_07969 [Ajellomyces dermatitidis ATCC
18188]
Length = 471
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E +YV NL N+D+ +LFS IG+++R I ++ NGR G+ V + +A
Sbjct: 364 SGGERSATIYVRNLPWSTCNEDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVEFDSAENA 423
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 424 ETAINKFTGYQYGGRPLGLTFV 445
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 98 GTKLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
G ++YVSNL V D+++LF ++ G + R +H D +GRP GS V + DA
Sbjct: 207 GRQIYVSNLPFNVGWQDLKDLFRQAAQQGAVVRADVHIDPSGRPKGSGIVAFESADDARN 266
Query: 155 ALKRYNNVLLDGKPMKI 171
A++++N G+ +++
Sbjct: 267 AIQQFNGYDWQGRTLEV 283
>gi|407408437|gb|EKF31876.1| poly(A)-binding protein, putative,polyadenylate-binding protein,
putative [Trypanosoma cruzi marinkellei]
Length = 569
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%)
Query: 86 SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVV 145
+LR + +G LYV N P T +++ ELF E G ++ + D NG G V
Sbjct: 292 ALRQKYMQCQTLGNNLYVRNFDPEFTEENLHELFKEYGVIRSCRVMTDANGNSRGFGFVS 351
Query: 146 YARRSDAFAALKRYNNVLLDGKPMKIEV 173
+ A AAL+ N +L+GKP+ + +
Sbjct: 352 FGNADQANAALREMNGRMLNGKPLIVNI 379
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H VT D++ +F GEL+ + D NGR G V + + A AL++
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFEPFGELEYVQLQKDDNGRSRGYGFVQFRDATQAREALEKM 337
Query: 160 NNVLLDGKPMKI 171
N L G+P+++
Sbjct: 338 NGFDLAGRPIRV 349
>gi|317138120|ref|XP_001816687.2| RNP domain protein [Aspergillus oryzae RIB40]
Length = 484
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E G +YV NL N+D+ +LFS IG++ R I ++ NGR G+ V + A
Sbjct: 375 SGGEKGPVIYVRNLPWSTCNEDLVDLFSTIGKVDRAEIQYEPNGRSRGTGVVQFDNAETA 434
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ I V
Sbjct: 435 ETAIAKFTGYQYGGRPLGITFV 456
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+LYVSNL V D+++LF ++ G + R +H D GRP GS V + DA A+
Sbjct: 218 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFESPEDARNAI 277
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 278 QQFNGYDWQGRALEV 292
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G LYV NL VT++ +RELF+E G + + D +G GS V ++ S+A L
Sbjct: 327 GLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLN 386
Query: 158 RYNNVLLDGKPMKIEVVGTNAE--IPLQARVN---VTGVNGRRKRTVVMTSGSGNAGGAA 212
N ++ GKP+ + + E LQA+ + + G R + T G+ G
Sbjct: 387 EMNGKMVGGKPLYVALAQRKEERRAKLQAQFSQMRPAFIPGVGPRMPIFTGGAPGLGQQI 446
Query: 213 AINRGP 218
+GP
Sbjct: 447 FYGQGP 452
>gi|71659594|ref|XP_821518.1| polyadenylate-binding protein 1 [Trypanosoma cruzi strain CL
Brener]
gi|70886900|gb|EAN99667.1| polyadenylate-binding protein 1, putative [Trypanosoma cruzi]
Length = 570
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%)
Query: 86 SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVV 145
+LR + +G LYV N P T +++ ELF E G ++ + D NG G V
Sbjct: 299 ALRQKYMQCQTLGNNLYVRNFDPEFTEENLHELFKEYGVIRSCRVMTDANGNSRGFGFVS 358
Query: 146 YARRSDAFAALKRYNNVLLDGKPMKIEV 173
+ A AAL+ N +L+GKP+ + +
Sbjct: 359 FENADQANAALREMNGRMLNGKPLIVNI 386
>gi|171689476|ref|XP_001909678.1| hypothetical protein [Podospora anserina S mat+]
gi|170944700|emb|CAP70811.1| unnamed protein product [Podospora anserina S mat+]
Length = 248
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 90 AGISGIEVGTKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYAR 148
AG++G +K+ VSNL V+ I+E F + +G++K+ I + G G A V +
Sbjct: 61 AGLTG---ESKIMVSNLPKDVSEAQIKEYFQQAVGQVKKVEISYGPGGVSRGLAHVTFHH 117
Query: 149 RSDAFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQAR 185
A A N +L+D +P+K+EV+ +A++ Q +
Sbjct: 118 ADGASKAFSTLNGLLIDNRPVKVEVIVASADLIPQPK 154
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G LYV NL VT++ +RELF+E G + + D +G GS V ++ S+A L
Sbjct: 327 GLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLN 386
Query: 158 RYNNVLLDGKPMKIEVVGTNAE--IPLQARVN---VTGVNGRRKRTVVMTSGSGNAGGAA 212
N ++ GKP+ + + E LQA+ + + G R + T G+ G
Sbjct: 387 EMNGKMVGGKPLYVALAQRKEERRAKLQAQFSQMRPAFIPGVGPRMPIFTGGAPGLGQQI 446
Query: 213 AINRGP 218
+GP
Sbjct: 447 FYGQGP 452
>gi|344231941|gb|EGV63820.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 205
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+PS Y I ++ RR ++F D L+ A S +YV NL T + + ELF
Sbjct: 17 KPSQYLIKRAIRR-QDF--------DDLQKALTS-----KTIYVGNLSNFTTEEQLFELF 62
Query: 120 SEIGELKRYAIHFDKNG-RPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
S+ G + R + D+N P G V+Y + A+K +LDG+ ++I++
Sbjct: 63 SKCGNIDRIIMGLDRNKLTPCGFCFVIYKEEGGSLNAIKYLKATVLDGQSLEIDL 117
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H VT D++ +F GEL+ + D NGR G V + + A AL++
Sbjct: 274 RLYVGNIHFNVTEQDLQAVFEPFGELEYVQLQKDDNGRSRGYGFVQFRDATQAREALEKM 333
Query: 160 NNVLLDGKPMKI 171
N L G+P+++
Sbjct: 334 NGFDLAGRPIRV 345
>gi|440794582|gb|ELR15742.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 257
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
T + ++NL V++DD++ L G+L + I FD++GR G+A+ V+ R A A++
Sbjct: 136 TTVEITNLSYDVSSDDLKRLLGGDGDLLKVHIAFDRSGRSEGTAKAVFESREAANRAIRD 195
Query: 159 YNNVLLDGKPMKIEVVGTNA 178
++ L+G+ + + +V A
Sbjct: 196 FDGAELEGQVLSLAIVANEA 215
>gi|6019464|gb|AAC64372.2| polyadenylate-binding protein 1 [Leishmania major]
Length = 560
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 86 SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVV 145
+LR + +G LYV N P T D+ ELF E GE+K + ++G G V
Sbjct: 294 ALRQKYMQHQALGNNLYVRNFDPEFTGADLLELFKEYGEVKSCRVMVSESGVSRGFGFVS 353
Query: 146 YARRSDAFAALKRYNNVLLDGKPMKIEV 173
++ +A AAL+ N +L+GKP+ + +
Sbjct: 354 FSNADEANAALREMNGRMLNGKPLIVNI 381
>gi|378730459|gb|EHY56918.1| hypothetical protein HMPREF1120_04982 [Exophiala dermatitidis
NIH/UT8656]
Length = 328
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
KL V NLH +T +DI +LF I + + +D+ GR G A V Y +DA A++ +
Sbjct: 94 KLRVDNLHYDLTEEDIYDLFERIAPVMDAKLRYDRAGRSEGVAFVTYQHVADARTAIREF 153
Query: 160 NNVLLDGKPMKIEVVGTNAEIPLQARVN 187
+ G+P+++ + +PL R N
Sbjct: 154 DGANAKGQPIRLTL------LPLPRRDN 175
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV NLH ++ DD+R++F G ++ + D+ G G V +AR DA AL
Sbjct: 286 RLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLN 345
Query: 160 NNVLLDGKPMKIEVVGTNAEIPLQARVNVT 189
+ + G+ +K+ V E+P + T
Sbjct: 346 GQLEIAGRAIKVSAVTDQTEVPEAGQTQTT 375
>gi|451999062|gb|EMD91525.1| hypothetical protein COCHEDRAFT_1021482 [Cochliobolus
heterostrophus C5]
Length = 253
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
TK+ VSNL + +++ F+ +G K+ + +D GR GSA +++ + A A
Sbjct: 69 TKIMVSNLPRDIDQVQLQDYFASAINVGRPKKVLLQYDAAGRSVGSATIIFNKHEQAAKA 128
Query: 156 LKRYNNVLLDGKPMKIEVVGTNAEIPLQAR 185
+ V +DG+P+++E++ + + IP AR
Sbjct: 129 TAALDGVKIDGRPVRVEMLVSPSAIPAAAR 158
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV NLH ++ DD+R++F G ++ + D+ G G V +AR DA AL
Sbjct: 286 RLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLN 345
Query: 160 NNVLLDGKPMKIEVVGTNAEIPLQARVNVT 189
+ + G+ +K+ V E+P + T
Sbjct: 346 GQLEIAGRAIKVSAVTDQTEVPEAGQTQTT 375
>gi|452840135|gb|EME42073.1| hypothetical protein DOTSEDRAFT_72991 [Dothistroma septosporum
NZE10]
Length = 506
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRS 150
+SG E ++V NL +N+D+ ELF IG +++ I ++ NGR GS V ++ +
Sbjct: 401 AVSGGEPNPIIHVKNLPWSTSNEDLVELFQTIGTVEQAEIQYEGNGRSRGSGVVRFSSQP 460
Query: 151 DAFAALKRYNNVLLDGKPMKIE 172
DA A++++ G+P+ ++
Sbjct: 461 DAQTAIEKFQGYSYGGRPLGLD 482
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
T+++VSN+ G D+++LF + G + R +H +G P GS V + DA A++
Sbjct: 231 TQIFVSNVPFGAGWQDLKDLFRQAGNVVRADVHTSPDGHPKGSGVVAFDTPEDAQNAIQS 290
Query: 159 YNNVLLDGKPMKI 171
++ G+ +++
Sbjct: 291 FHGYDWQGRILEV 303
>gi|259481715|tpe|CBF75495.1| TPA: RNP domain protein (AFU_orthologue; AFUA_6G12300) [Aspergillus
nidulans FGSC A4]
Length = 484
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRS 150
SG E +YV NL NDD+ +LFS IG+++R I ++ NGR G+ V +
Sbjct: 373 ATSGGEKSNTIYVRNLPWSTCNDDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVQFDNAD 432
Query: 151 DAFAALKRYNNVLLDGKPMKIEVV 174
A ++ ++ G+P+ I V
Sbjct: 433 TAETSIAKFTGYQYGGRPLGITFV 456
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+LYVSNL V D+++LF ++ G + R +H D +GRP GS V + DA A+
Sbjct: 223 QLYVSNLPFNVGWQDLKDLFRQAAQQGTVIRADVHTDASGRPKGSGIVAFESPDDARNAI 282
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 283 QQFNGYDWQGRTLEV 297
>gi|116179604|ref|XP_001219651.1| hypothetical protein CHGG_00430 [Chaetomium globosum CBS 148.51]
gi|88184727|gb|EAQ92195.1| hypothetical protein CHGG_00430 [Chaetomium globosum CBS 148.51]
Length = 530
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAF 153
G+E +YV NL +NDD+ ELFS IG++++ I ++ +GR GS V + A
Sbjct: 425 GVEKCDIIYVRNLPWSTSNDDLVELFSTIGKVEQAEIQYEPSGRSRGSGVVRFDSADTAE 484
Query: 154 AALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 485 TAIAKFQGYQYGGRPLGLSYV 505
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
G ++YVSNL V D+++LF + G + R +H +GRP GS VV+ DA
Sbjct: 269 GRQIYVSNLPFNVGWQDLKDLFRQAARAGGVIRADVHLGPDGRPKGSGIVVFESPEDARN 328
Query: 155 ALKRYNNVLLDGKPMKI 171
A++++N G+ +++
Sbjct: 329 AIQQFNGYDWQGRMLEV 345
>gi|258568094|ref|XP_002584791.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906237|gb|EEP80638.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 420
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+YV NL N+D+ ELFS IG+++R I +++NGR G+ V + +A A+ +++
Sbjct: 320 IYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEQNGRSRGTGVVQFDTIENAETAISKFS 379
Query: 161 NVLLDGKPMKIEVV 174
G+P+ + V
Sbjct: 380 GYQYGGRPLGLTFV 393
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YVSNL V D+++LF ++ G + R +H D NGRP GS V + DA A+
Sbjct: 161 QIYVSNLPFNVGWQDLKDLFRQATQQGTVVRADVHLDPNGRPKGSGIVAFESVEDARNAI 220
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 221 QQFNGYEWHGRNLEV 235
>gi|334184261|ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 599
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV NLH ++ DD+R++F G ++ + D+ G G V +AR DA AL
Sbjct: 324 RLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLN 383
Query: 160 NNVLLDGKPMKIEVVGTNAEIP 181
+ + G+ +K+ V E+P
Sbjct: 384 GQLEIAGRAIKVSAVTDQTEVP 405
>gi|190348560|gb|EDK41032.2| hypothetical protein PGUG_05130 [Meyerozyma guilliermondii ATCC
6260]
Length = 198
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
RPS Y I K+ R + F+D R+ +YV NL T + + ELF
Sbjct: 17 RPSQYLIKKALRS--------NFFDDLKRSMH------SKTVYVGNLSHFTTEEQVHELF 62
Query: 120 SEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
S+ G + R + D++ P G V+Y S + A+K LD + ++I++
Sbjct: 63 SKCGRIDRIIMGLDRHRLTPCGFCFVIYKEESGSLNAMKYLKGTSLDSQNLEIDL 117
>gi|452978819|gb|EME78582.1| hypothetical protein MYCFIDRAFT_212424 [Pseudocercospora fijiensis
CIRAD86]
Length = 252
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 99 TKLYVSNLHPGVTNDDIRELFS-EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+K+ VSNL VT I+E FS + +KR +++ NGR GSA V + + + A A+
Sbjct: 73 SKISVSNLPEDVTESMIKEYFSTSVAPVKRVIVNYGPNGRSRGSATVFFGKPTAAQEAV- 131
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIP 181
R + +DG+ M++EV+ + +P
Sbjct: 132 RLDGTKVDGRAMRVEVLLSANSVP 155
>gi|451848303|gb|EMD61609.1| hypothetical protein COCSADRAFT_39306 [Cochliobolus sativus ND90Pr]
Length = 253
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
TK+ VSNL + +++ F+ +G K+ + +D GR GSA +++ + A A
Sbjct: 69 TKIMVSNLPRDIDQVQLQDYFASAINVGRPKKVLLQYDAAGRSVGSATIIFNKHEQAAKA 128
Query: 156 LKRYNNVLLDGKPMKIEVVGTNAEIPLQAR 185
+ V +DG+P+++E++ + + IP AR
Sbjct: 129 TAALDGVKIDGRPVRVEMLVSPSVIPAAAR 158
>gi|239608856|gb|EEQ85843.1| RNP domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 534
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E +YV NL N+D+ +LFS IG+++R I ++ NGR G+ V + +A
Sbjct: 427 SGGERSATIYVRNLPWSTCNEDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVEFDSAENA 486
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 487 ETAINKFTGYQYGGRPLGLTFV 508
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 98 GTKLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
G ++YVSNL V D+++LF ++ G + R +H D +GRP GS V + DA
Sbjct: 271 GRQIYVSNLPFNVGWQDLKDLFRQAAQQGAVVRADVHIDPSGRPKGSGIVAFESADDARN 330
Query: 155 ALKRYNNVLLDGKPMKI 171
A++++N G+ +++
Sbjct: 331 AIQQFNGYDWQGRTLEV 347
>gi|392862747|gb|EAS36587.2| RNP domain-containing protein [Coccidioides immitis RS]
Length = 473
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E +YV NL N+D+ ELFS IG+++R I ++ NGR G+ V + +A A
Sbjct: 368 ERSATIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEANGRSRGTGVVQFDTVENAETA 427
Query: 156 LKRYNNVLLDGKPMKIEVV 174
+ ++ G+P+ + V
Sbjct: 428 ISKFTGYQYGGRPLGLTFV 446
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF ++ G + R +H D NGRP GS V + DA A+
Sbjct: 213 QIYVNNLPFNVGWQDLKDLFRQATQQGTVARADVHLDPNGRPKGSGIVAFENVEDARNAI 272
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 273 QQFNGYEWHGRTLEV 287
>gi|213409309|ref|XP_002175425.1| predicted protein [Schizosaccharomyces japonicus yFS275]
gi|212003472|gb|EEB09132.1| predicted protein [Schizosaccharomyces japonicus yFS275]
Length = 227
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 78 WQHDLFEDSL--RAAGISGI--EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
W+HDL +D + R I + + + + V N+H V+ ++++ +F + +K ++ FD
Sbjct: 54 WEHDLSQDRIESRPRRIERVKRDATSLVSVDNIHYEVSEEELKTVFDRVAPVKNVSMKFD 113
Query: 134 KNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
+ GR G + + + DA A+ N +L + + +E++ +
Sbjct: 114 RAGRSEGRCTIAFEKEEDAKLAVAELNGFMLRDRGLHVELLAS 156
>gi|393231928|gb|EJD39515.1| hypothetical protein AURDEDRAFT_116082 [Auricularia delicata
TFB-10046 SS5]
Length = 240
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYA-IHFDKNGRPSGSAEVVYARRSDAFA 154
E KL VSNLH VT+ D+ F G R I +D++GR +G V+Y +A
Sbjct: 54 EAMPKLVVSNLHYEVTDRDLSSAFGAYGSFSREPFIRYDRSGRSTGVGVVIYTTADEAAR 113
Query: 155 ALKRYNNVLLDGKPMKIE 172
A + V+L G+P+ I+
Sbjct: 114 AKAQMQGVILKGEPIDIK 131
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV NLH ++ DD+R++F G ++ + D+ G G V +AR DA AL
Sbjct: 335 RLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLN 394
Query: 160 NNVLLDGKPMKIEVVGTNAEIP 181
+ + G+ +K+ V E+P
Sbjct: 395 GQLEIAGRAIKVSAVTDQTEVP 416
>gi|325089108|gb|EGC42418.1| RNP domain-containing protein [Ajellomyces capsulatus H88]
Length = 471
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E +YV NL N+D+ +LFS IG++++ I ++ NGR G+ V + +A
Sbjct: 364 SGGERSATIYVRNLPWSTCNEDLVDLFSTIGKVEKAEIQYEPNGRSRGTGVVEFDTAENA 423
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 424 ETAINKFTGYQYGGRPLGLTFV 445
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 98 GTKLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
G ++YVSNL V D+++LF ++ G + R +H D +GRP GS V + DA
Sbjct: 208 GRQIYVSNLPFNVGWQDLKDLFRQAAQHGAVVRADVHADPSGRPKGSGIVAFESADDARN 267
Query: 155 ALKRYNNVLLDGKPMKI 171
A++++N G+ +++
Sbjct: 268 AIQQFNGYDWQGRTLEV 284
>gi|448097632|ref|XP_004198719.1| Piso0_002106 [Millerozyma farinosa CBS 7064]
gi|359380141|emb|CCE82382.1| Piso0_002106 [Millerozyma farinosa CBS 7064]
Length = 188
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 15/115 (13%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
RPS Y I K+ RR FE+ +A +YV NL T + I ELF
Sbjct: 17 RPSPYLIKKAVRRQN--------FENLSKAMH------SKTVYVGNLSHFTTEEQIHELF 62
Query: 120 SEIGELKRYAIHFDKNG-RPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
S G + R + D+N P G V+Y + A+K +LD ++I++
Sbjct: 63 SSCGTIDRIIMGLDRNKLTPCGFCFVIYKDEEGSLNAMKYLKGTMLDSHTLEIDL 117
>gi|336259093|ref|XP_003344351.1| hypothetical protein SMAC_08294 [Sordaria macrospora k-hell]
gi|380092698|emb|CCC09451.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 433
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E +YV NL +N+D+ ELFS IG++++ I ++ +GR GS V + A
Sbjct: 326 SGTERSEIIYVRNLPWSTSNEDLVELFSTIGKVEQAEIQYEPSGRSRGSGVVRFDSADTA 385
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A++++ G+P+ + V
Sbjct: 386 DTAIQKFQGYQYGGRPLSLSFV 407
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YVSNL V D+++LF + G + R +H +GRP GS VV+ DA A+
Sbjct: 171 QIYVSNLPYNVGWQDLKDLFRQAARNGGVIRADVHIGPDGRPKGSGIVVFETPDDARNAI 230
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 231 QQFNGYDWQGRMLEV 245
>gi|225560818|gb|EEH09099.1| RNP domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 471
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E +YV NL N+D+ +LFS IG++++ I ++ NGR G+ V + +A
Sbjct: 364 SGGERSATIYVRNLPWSTCNEDLVDLFSTIGKVEKAEIQYEPNGRSRGTGVVEFDTAENA 423
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 424 ETAINKFTGYQYGGRPLGLTFV 445
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 98 GTKLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
G ++YVSNL V D+++LF ++ G + R +H D +GRP GS V + DA
Sbjct: 208 GRQIYVSNLPFNVGWQDLKDLFRQAAQHGAVVRADVHVDPSGRPKGSGIVAFESADDARN 267
Query: 155 ALKRYNNVLLDGKPMKI 171
A++++N G+ +++
Sbjct: 268 AIQQFNGYDWQGRTLEV 284
>gi|297836410|ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
gi|297331927|gb|EFH62346.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
Length = 557
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV NLH ++ DD+R++F G ++ + D+ G G V +AR DA AL
Sbjct: 286 RLYVGNLHINMSEDDLRKVFEPFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLN 345
Query: 160 NNVLLDGKPMKIEVVGTNAEIP 181
+ + G+ +K+ V E+P
Sbjct: 346 GQLEIAGRAIKVSAVTDQTEVP 367
>gi|294656317|ref|XP_458582.2| DEHA2D02618p [Debaryomyces hansenii CBS767]
gi|199431377|emb|CAG86716.2| DEHA2D02618p [Debaryomyces hansenii CBS767]
Length = 225
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 15/115 (13%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
RPS Y I K+ RR +NF D+L A S +YV NL + + I ELF
Sbjct: 17 RPSQYLIKKAVRR-QNF--------DNLNRALHSKT-----VYVGNLSHFTSEEQIHELF 62
Query: 120 SEIGELKRYAIHFDKNG-RPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
S+ G + R + D+N P G V+Y R + A+K LD + ++I++
Sbjct: 63 SKCGTIDRIIMGLDRNKLTPCGFCFVIYKREEGSLNAMKFLKGTNLDSQVLEIDL 117
>gi|346326972|gb|EGX96568.1| RNP domain-containing protein [Cordyceps militaris CM01]
Length = 609
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E +YV NL +NDD+ ELF+ IG++++ I ++ +GR GS V + A
Sbjct: 441 SGTERSEIIYVRNLPWSTSNDDLIELFTTIGKVEQAEIQYEPSGRSRGSGVVKFDTAETA 500
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 501 ETAISKFQGYQYGGRPLNLSFV 522
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
G ++YV+NL + D+++LF + G + R +H +GRP GS VV+ DA +
Sbjct: 286 GRQIYVANLPFNIGWQDLKDLFRQAARNGGVIRADVHSGPDGRPKGSGIVVFESPDDARS 345
Query: 155 ALKRYNNVLLDGKPMKI 171
A++++N G+ +++
Sbjct: 346 AIQQFNGYDWQGRIIEV 362
>gi|156042414|ref|XP_001587764.1| hypothetical protein SS1G_11004 [Sclerotinia sclerotiorum 1980]
gi|154695391|gb|EDN95129.1| hypothetical protein SS1G_11004 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 464
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRS 150
+G E +YV NL +N+D+ ELF+ IG++++ I ++ NGR G+ V +
Sbjct: 356 ATAGTERSEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRFDSAE 415
Query: 151 DAFAALKRYNNVLLDGKPMKIEVVGTNAEIP 181
+A A+++++ G+P+ + V +IP
Sbjct: 416 NADTAIEKFSGYQYGGRPLGLSFV--KYQIP 444
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YVSNL V D+++LF + G + R +H +GRP GS V + DA A+
Sbjct: 202 QIYVSNLPYTVGWQDLKDLFRGAARNGAVVRADVHVGPDGRPKGSGIVAFESPDDARNAI 261
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+P+++
Sbjct: 262 QQFNGYDWQGRPLEV 276
>gi|406859155|gb|EKD12224.1| protein mlo3-like protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 263
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
K+ VS +T I+E F++ +G +KR + + G G A++ + R A A++
Sbjct: 72 KIQVSGFPKDITEAMIKEYFAKTVGAVKRVDLSYGPRGESRGVADITFVRSDSATRAVES 131
Query: 159 YNNVLLDGKPMKIEVV 174
NN+ +DGKP+K+ ++
Sbjct: 132 CNNIPVDGKPIKVSLI 147
>gi|448101474|ref|XP_004199569.1| Piso0_002106 [Millerozyma farinosa CBS 7064]
gi|359380991|emb|CCE81450.1| Piso0_002106 [Millerozyma farinosa CBS 7064]
Length = 187
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 15/115 (13%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
RPS Y I K+ RR +NF +S +YV NL T + I ELF
Sbjct: 17 RPSPYLIKKAVRR-QNF-------------ENLSKAMHSKTVYVGNLSHFTTEEQIHELF 62
Query: 120 SEIGELKRYAIHFDKNG-RPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
S G + R + D+N P G V+Y + A+K +LD ++I++
Sbjct: 63 SSCGTIDRIIMGLDRNKLTPCGFCFVIYKDEEGSLNAMKYLKGTMLDSHTLEIDL 117
>gi|115389920|ref|XP_001212465.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194861|gb|EAU36561.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 468
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 85 DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEV 144
+S SG E +YV NL N+D+ +LFS IG+++R I ++ NGR G+ V
Sbjct: 344 NSFTDFATSGGEKSPIIYVRNLPWSTCNEDLVDLFSTIGKVERAEIQYEPNGRSRGTGVV 403
Query: 145 VYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
+ A A+ ++ G+P+ I V
Sbjct: 404 QFDNAETAETAIAKFTGYQYGGRPLGITFV 433
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+LYV+NL V D+++LF ++ G + R +H D GRP GS V + DA A+
Sbjct: 201 QLYVANLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFESPDDARNAI 260
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 261 QQFNGYDWQGRTLEV 275
>gi|326476777|gb|EGE00787.1| RNP domain-containing protein [Trichophyton tonsurans CBS 112818]
Length = 436
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF ++ G + R +H D +GRP GS V + DA A+
Sbjct: 163 QIYVANLPYNVGWQDLKDLFRQATQQGAVVRADVHMDASGRPKGSGIVAFESPDDARNAI 222
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+P+++
Sbjct: 223 QQFNGYEWQGRPLEV 237
>gi|343429912|emb|CBQ73484.1| related to HRB1-Poly(A+) RNA-binding protein, involved in the
export of mRNAs from the nucleus to the cytoplasm
[Sporisorium reilianum SRZ2]
Length = 521
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+++V NL +N+D+ ELF G++ I F ++GR G V +A DA A+ ++
Sbjct: 389 QIFVRNLPWSTSNEDLVELFQTTGKVDEAEIVF-EHGRSKGVGVVQFATVEDAETAIAKF 447
Query: 160 NNVLLDGKPMKIEV 173
N+ + G+P++IE
Sbjct: 448 NSYVYGGRPLEIEF 461
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
T+L+VSNL V+ D+++LF G + R ++ +GR G+ V + +DA A+
Sbjct: 211 TQLFVSNLPYDVSWQDLKDLFRSAGNVTRADVNMGPDGRSKGTGIVAFGNSNDASNAIAM 270
Query: 159 YNNVLLDGKPMKI 171
Y+ G+ +++
Sbjct: 271 YHGYDFRGRMLEV 283
>gi|119194811|ref|XP_001248009.1| hypothetical protein CIMG_01780 [Coccidioides immitis RS]
Length = 464
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E +YV NL N+D+ ELFS IG+++R I ++ NGR G+ V + +A A
Sbjct: 359 ERSATIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEANGRSRGTGVVQFDTVENAETA 418
Query: 156 LKRYNNVLLDGKPMKIEVV 174
+ ++ G+P+ + V
Sbjct: 419 ISKFTGYQYGGRPLGLTFV 437
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF ++ G + R +H D NGRP GS V + DA A+
Sbjct: 204 QIYVNNLPFNVGWQDLKDLFRQATQQGTVARADVHLDPNGRPKGSGIVAFENVEDARNAI 263
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 264 QQFNGYEWHGRTLEV 278
>gi|358385647|gb|EHK23243.1| hypothetical protein TRIVIDRAFT_127044, partial [Trichoderma virens
Gv29-8]
Length = 453
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G E G +YV NL +NDD+ ELF+ IG++++ I ++ +GR G+ V + A
Sbjct: 347 AGTERGEIIYVRNLPWSTSNDDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRFDSAETA 406
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 407 ETAIAKFQGYQYGGRPLNLSFV 428
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF + IG + R +H +GRP GS VV+ DA +A+
Sbjct: 183 QIYVANLPYNVGWQDLKDLFRQAARIGGVMRADVHVGPDGRPKGSGIVVFESPDDARSAI 242
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 243 QQFNGYDWQGRLLEV 257
>gi|20466772|gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV NLH ++ DD+R++F G ++ + D+ G G V +AR DA AL
Sbjct: 145 RLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLN 204
Query: 160 NNVLLDGKPMKIEVVGTNAEIP 181
+ + G+ +K+ V E+P
Sbjct: 205 GQLEIAGRAIKVSAVTDQTEVP 226
>gi|308449823|ref|XP_003088089.1| hypothetical protein CRE_07179 [Caenorhabditis remanei]
gi|308249635|gb|EFO93587.1| hypothetical protein CRE_07179 [Caenorhabditis remanei]
Length = 174
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 25/185 (13%)
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNV 162
+SNL P V + D+ ELF + +L +++F+++G G+ ++ +R DA +++++ V
Sbjct: 12 ISNLAPTVISSDLEELFGDY-KLHSVSVNFNEHGESLGTGDISLTKR-DADRLVQKFSGV 69
Query: 163 LLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQG 222
LDGK MK V+ ++ + RV+ G + R+ +SG G G NR P
Sbjct: 70 ALDGKMMKFAVIDSSN---IAGRVDF----GNKSRSAPASSGRGFQSGPRRFNRKPEDFL 122
Query: 223 RRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELD 282
R G +G + RGG GG +G G K K+ +LD EL+
Sbjct: 123 RDG----------VHEGDTK---RGGSSRGGFRKGGRGGDRDSKPK---KTEAELDAELE 166
Query: 283 NYHAE 287
Y A+
Sbjct: 167 AYMAK 171
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H +T D+R +F GEL+ + + NGR G V Y ++A AL++
Sbjct: 313 RLYVGNIHFSITEPDLRTVFGPFGELRFVQLQKEDNGRSRGYGFVEYNDPANAREALEKM 372
Query: 160 NNVLLDGKPMKI 171
N L G+P+++
Sbjct: 373 NGFDLAGRPIRV 384
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H +T +DI+ +F GEL+ + D+ GR G V + + A AL++
Sbjct: 269 RLYVGNIHFSITENDIQNVFEPFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKM 328
Query: 160 NNVLLDGKPMKI 171
N L G+P+++
Sbjct: 329 NGFDLAGRPIRV 340
>gi|320031479|gb|EFW13442.1| hypothetical protein CPSG_09988 [Coccidioides posadasii str.
Silveira]
Length = 382
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+YV NL N+D+ ELFS IG+++R I ++ NGR G+ V + +A A+ ++
Sbjct: 282 IYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEANGRSRGTGVVQFDTVENAETAISKFT 341
Query: 161 NVLLDGKPMKIEVV 174
G+P+ + V
Sbjct: 342 GYQYGGRPLGLTFV 355
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF ++ G + R +H D NGRP GS V + DA A+
Sbjct: 122 QIYVNNLPFNVGWQDLKDLFRQATQQGTVARADVHLDPNGRPKGSGIVAFENVEDARNAI 181
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 182 QQFNGYEWHGRTLEV 196
>gi|392579008|gb|EIW72135.1| hypothetical protein TREMEDRAFT_66724 [Tremella mesenterica DSM
1558]
Length = 250
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 57/235 (24%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
VD SLDD+I +++S + GGR + L N R
Sbjct: 3 VDKSLDDMIADKRQSGK----------------------GGRRS-------LPNKREQGT 33
Query: 65 TIAKSFRRTRNFPWQHDLFEDSLRAA------------GISGIE--------VGTKLYVS 104
A+ R+ W HD F GI+ + + ++ V
Sbjct: 34 PYARPPPRSTEDKWVHDAFRGPGSGGRGRGGRIVSAGNGIAAVAGTGSGFTGISPRIEVV 93
Query: 105 NLHPGVTNDDIRELFSEIGELKR-YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVL 163
LH VT D++ +FS+ G L + I +D++GR +G A + YA A A+ +++ +
Sbjct: 94 GLHYEVTPVDLKNIFSQAGTLVQGPTIKYDRSGRSTGVATMEYASAQQAKIAINKFDGAM 153
Query: 164 LDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGP 218
G+ + I ++ P+ R+ VT + K + +G + G+ N P
Sbjct: 154 TKGQTISIRLLP-----PVTPRLQVTPQS--SKPLIARIAGGTASSGSTPTNTAP 201
>gi|361128764|gb|EHL00690.1| putative Uncharacterized RNA-binding protein [Glarea lozoyensis
74030]
Length = 410
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRS 150
+G E +YV NL +N+D+ ELF+ IG++++ I ++ NGR G+ V +
Sbjct: 302 ATAGTERSEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRFDSAE 361
Query: 151 DAFAALKRYNNVLLDGKPMKIEVV 174
+A A+++++ G+P+ + V
Sbjct: 362 NAETAIEKFSGYQYGGRPLGLTFV 385
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YVSNL V D+++LF + G + R +H +GRP GS VV+ DA A+
Sbjct: 145 QIYVSNLPYTVGWQDLKDLFRQATRNGTVIRADVHVGPDGRPKGSGIVVFESPDDARNAI 204
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+P+++
Sbjct: 205 QQFNGYDWQGRPLEV 219
>gi|347841226|emb|CCD55798.1| hypothetical protein [Botryotinia fuckeliana]
Length = 323
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G E +YV NL +N+D+ ELF+ IG++++ I ++ NGR G+ V + +A
Sbjct: 217 AGTERSEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRFDSAENA 276
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+++++ G+P+ + V
Sbjct: 277 DTAIEKFSGYQYGGRPLGLSFV 298
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YVSNL V D+++LF + G + R +H +GRP GS V + DA A+
Sbjct: 60 QIYVSNLPYTVGWQDLKDLFRGAARNGAVVRADVHVGPDGRPKGSGIVAFESPDDARNAI 119
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+P+++
Sbjct: 120 QQFNGYDWQGRPLEV 134
>gi|260950073|ref|XP_002619333.1| hypothetical protein CLUG_00492 [Clavispora lusitaniae ATCC 42720]
gi|238846905|gb|EEQ36369.1| hypothetical protein CLUG_00492 [Clavispora lusitaniae ATCC 42720]
Length = 194
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+PS Y I K+ RR NF D++ A S +YV NL T + I ELF
Sbjct: 17 KPSQYLIRKAIRRG-NF--------DNITKALQS-----KTVYVGNLTHFTTEEQIHELF 62
Query: 120 SEIGELKRYAIHFDKNG-RPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
S+ G + R + D+N P G V+Y + A+K LDG+ ++I++
Sbjct: 63 SKCGTIDRIIMGLDRNKLTPCGFCFVIYKDEEGSLNAMKYLKGTYLDGQSLEIDL 117
>gi|398396806|ref|XP_003851861.1| hypothetical protein MYCGRDRAFT_104845 [Zymoseptoria tritici
IPO323]
gi|339471741|gb|EGP86837.1| hypothetical protein MYCGRDRAFT_104845 [Zymoseptoria tritici
IPO323]
Length = 498
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG + ++V NL +NDD+ ELF IG + R I ++ NGR G+ V + + DA
Sbjct: 395 SGGQPNAIIHVKNLPWSTSNDDLVELFQTIGTVDRAEIQYEANGRSRGAGVVQFGSQGDA 454
Query: 153 FAALKRYNNVLLDGKPMKIE 172
A++++ G+P+ ++
Sbjct: 455 ATAIEKFQGYSYGGRPLGLD 474
>gi|303310955|ref|XP_003065489.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105151|gb|EER23344.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 439
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E +YV NL N+D+ ELFS IG+++R I ++ NGR G+ V + +A A
Sbjct: 334 ERSATIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEANGRSRGTGVVQFDTVENAETA 393
Query: 156 LKRYNNVLLDGKPMKIEVV 174
+ ++ G+P+ + V
Sbjct: 394 ISKFTGYQYGGRPLGLTFV 412
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF ++ G + R +H D NGRP GS V + DA A+
Sbjct: 179 QIYVNNLPFNVGWQDLKDLFRQATQQGTVARADVHLDPNGRPKGSGIVAFENVEDARNAI 238
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 239 QQFNGYEWHGRTLEV 253
>gi|115433510|ref|XP_001216892.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189744|gb|EAU31444.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 322
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 21/129 (16%)
Query: 66 IAKSFRRTR---NFPWQHDLFEDS------LRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ KS R R + W HD +ED L + T L + P T R
Sbjct: 35 VKKSHREDRVDLDLDWVHDKYEDDRDSAFELHPTASGRLCFNTALSTPDPCPSPTP---R 91
Query: 117 ---------ELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
+LFS IG + + +D+ GR G A V Y+R SDA A+ ++ G+
Sbjct: 92 RSLFPLGGYDLFSRIGPVSNLTLVYDRAGRSEGVAFVTYSRVSDARTAISEFDGANAKGQ 151
Query: 168 PMKIEVVGT 176
P++I +V T
Sbjct: 152 PIRITLVST 160
>gi|367047383|ref|XP_003654071.1| hypothetical protein THITE_2078523 [Thielavia terrestris NRRL 8126]
gi|347001334|gb|AEO67735.1| hypothetical protein THITE_2078523 [Thielavia terrestris NRRL 8126]
Length = 476
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G+E +YV NL +N+D+ ELFS IG++++ I ++ +GR G+ V + A
Sbjct: 370 AGVEKCDTIYVRNLPWSTSNEDLVELFSTIGKVEQAEIQYEPSGRSRGTGVVRFDNADTA 429
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 430 ETAIAKFQAYQYGGRPLGLSYV 451
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+LYVSNL V D+++LF + +G + R +H +GRP GS VV+ DA A+
Sbjct: 221 QLYVSNLPFNVGWQDLKDLFRQAARVGAVIRADVHLGPDGRPKGSGIVVFESPEDARNAI 280
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 281 QQFNGYDWQGRLLEV 295
>gi|336467389|gb|EGO55553.1| hypothetical protein NEUTE1DRAFT_95731 [Neurospora tetrasperma FGSC
2508]
gi|350287968|gb|EGZ69204.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 434
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E +YV NL +N+D+ ELFS IG++++ I ++ +GR GS V + A
Sbjct: 327 SGTERSEIIYVRNLPWSTSNEDLVELFSTIGKVEQAEIQYEPSGRSRGSGVVRFDNADTA 386
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A++++ G+P+ + V
Sbjct: 387 DTAIQKFQGYQYGGRPLGLSFV 408
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YVSNL V D+++LF + G + R +H +GRP GS VV+ DA A+
Sbjct: 172 QIYVSNLPYNVGWQDLKDLFRQAARNGGVIRADVHIGPDGRPKGSGIVVFETPDDARNAI 231
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 232 QQFNGYDWQGRMLEV 246
>gi|317029025|ref|XP_003188692.1| RNP domain protein [Aspergillus niger CBS 513.88]
Length = 428
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+YV NL N+D+ +LFS IG++ R I ++ NGR G+ V + A A+ ++
Sbjct: 327 IYVRNLPWSTCNEDLVDLFSTIGKVDRAEIQYEPNGRSRGTGVVQFDSADTAETAIAKFT 386
Query: 161 NVLLDGKPMKIEVV 174
G+P+ I V
Sbjct: 387 GYQYGGRPLGITFV 400
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+LYVSNL V D+++LF ++ G + R +H D GRP GS V + DA A+
Sbjct: 166 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFESPEDARNAI 225
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 226 QQFNGYDWQGRQLEV 240
>gi|164427086|ref|XP_959532.2| hypothetical protein NCU02404 [Neurospora crassa OR74A]
gi|157071601|gb|EAA30296.2| predicted protein [Neurospora crassa OR74A]
Length = 400
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E +YV NL +N+D+ ELFS IG++++ I ++ +GR GS V + A
Sbjct: 293 SGTERSEIIYVRNLPWSTSNEDLVELFSTIGKVEQAEIQYEPSGRSRGSGVVRFDNADTA 352
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A++++ G+P+ + V
Sbjct: 353 DTAIQKFQGYQYGGRPLGLSFV 374
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YVSNL V D+++LF + G + R +H +GRP GS VV+ DA A+
Sbjct: 138 QIYVSNLPYNVGWQDLKDLFRQAARNGGVIRADVHIGPDGRPKGSGIVVFETPDDARNAI 197
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 198 QQFNGYDWQGRMLEV 212
>gi|317029023|ref|XP_001390966.2| RNP domain protein [Aspergillus niger CBS 513.88]
Length = 480
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+YV NL N+D+ +LFS IG++ R I ++ NGR G+ V + A A+ ++
Sbjct: 379 IYVRNLPWSTCNEDLVDLFSTIGKVDRAEIQYEPNGRSRGTGVVQFDSADTAETAIAKFT 438
Query: 161 NVLLDGKPMKIEVV 174
G+P+ I V
Sbjct: 439 GYQYGGRPLGITFV 452
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+LYVSNL V D+++LF ++ G + R +H D GRP GS V + DA A+
Sbjct: 218 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFESPEDARNAI 277
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 278 QQFNGYDWQGRQLEV 292
>gi|326477774|gb|EGE01784.1| RNP domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 307
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF ++ G + R +H D +GRP GS V + DA A+
Sbjct: 74 QIYVANLPYNVGWQDLKDLFRQATQQGAVVRADVHMDASGRPKGSGIVAFESPDDARNAI 133
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+P+++
Sbjct: 134 QQFNGYEWQGRPLEV 148
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E G +YV NL N+D+ ELFS IG+++R I ++ NGR G+ V + +A A
Sbjct: 233 ERGVSIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEPNGRSRGTGVVQFDTADNAETA 292
Query: 156 LKR 158
+ +
Sbjct: 293 ISK 295
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H +T D+R +F GEL+ + D GR G V + A AL++
Sbjct: 311 RLYVGNIHFSITESDLRNVFEPFGELEFVQLQKDDTGRSRGYGFVQFRDSDQAREALEKM 370
Query: 160 NNVLLDGKPMKI 171
N L G+P+++
Sbjct: 371 NGFDLAGRPIRV 382
>gi|302916253|ref|XP_003051937.1| hypothetical protein NECHADRAFT_59730 [Nectria haematococca mpVI
77-13-4]
gi|256732876|gb|EEU46224.1| hypothetical protein NECHADRAFT_59730 [Nectria haematococca mpVI
77-13-4]
Length = 432
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G E +YV NL +NDD+ ELF+ IG++++ I ++ +GR G+ V + A
Sbjct: 326 TGTERSETIYVRNLPWSTSNDDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRFDSAETA 385
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 386 ETAIAKFQGYQYGGRPLNLSFV 407
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF + G + R +H +GRP GS VV+ DA A+
Sbjct: 170 QIYVANLPFNVGWQDLKDLFRQAARNGAVIRADVHIGPDGRPKGSGIVVFESPDDARNAI 229
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 230 QQFNGYDWQGRVLEV 244
>gi|425768949|gb|EKV07460.1| hypothetical protein PDIG_73210 [Penicillium digitatum PHI26]
gi|425776211|gb|EKV14439.1| hypothetical protein PDIP_43690 [Penicillium digitatum Pd1]
Length = 491
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E +YV NL N+D+ +LFS IG++ R I ++ NGR G+ V + A A
Sbjct: 386 EKSAVIYVRNLPWSTCNEDLIDLFSTIGKVDRAEIQYEPNGRSRGTGVVQFDTPDTAETA 445
Query: 156 LKRYNNVLLDGKPMKIEVV 174
+ +++ G+P+ I V
Sbjct: 446 IAKFSGYQYGGRPLGITFV 464
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YVSNL V D+++LF ++ G + R +H D GRP GS V + DA A+
Sbjct: 220 QIYVSNLPFNVGWQDLKDLFRSAAQQGAVIRADVHTDPTGRPKGSGIVAFESPDDARNAI 279
Query: 157 KRYNNVLLDGKPMKI 171
++N G+P+++
Sbjct: 280 AQFNGYDWQGRPLEV 294
>gi|358371386|dbj|GAA87994.1| RNP domain protein, partial [Aspergillus kawachii IFO 4308]
Length = 335
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+YV NL N+D+ +LFS IG++ R I ++ NGR G+ V + A A+ ++
Sbjct: 233 IYVRNLPWSTCNEDLVDLFSTIGKVDRAEIQYEPNGRSRGTGVVQFDSTETAETAIAKFT 292
Query: 161 NVLLDGKPMKIEVV 174
G+P+ I V
Sbjct: 293 GYQYGGRPLGITFV 306
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+LYVSNL V D+++LF ++ G + R +H D GRP GS V + DA A+
Sbjct: 72 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFESPEDARNAI 131
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 132 QQFNGYDWQGRQLEV 146
>gi|350630184|gb|EHA18557.1| hypothetical protein ASPNIDRAFT_52545 [Aspergillus niger ATCC 1015]
Length = 486
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+YV NL N+D+ +LFS IG++ R I ++ NGR G+ V + A A+ ++
Sbjct: 385 IYVRNLPWSTCNEDLVDLFSTIGKVDRAEIQYEPNGRSRGTGVVQFDSADTAETAIAKFT 444
Query: 161 NVLLDGKPMKIEVV 174
G+P+ I V
Sbjct: 445 GYQYGGRPLGITFV 458
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+LYVSNL V D+++LF ++ G + R +H D GRP GS V + DA A+
Sbjct: 224 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFESPEDARNAI 283
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 284 QQFNGYDWQGRQLEV 298
>gi|167519406|ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778005|gb|EDQ91621.1| predicted protein [Monosiga brevicollis MX1]
Length = 563
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 9/180 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
+ LY+ +L VT D +R+ FS+ G + I D NG G V + +A AA++
Sbjct: 290 NSNLYIKHLPEDVTEDALRDKFSKFGTITSLKIMTDNNGDSRGFGFVNFDSADEAAAAIQ 349
Query: 158 RYNNVLLDGKPMKIEVV--GTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAIN 215
+ ++DGKP+ + + + + L +R + G +M N N
Sbjct: 350 EMHGSMIDGKPLYVALALRKVDRQKQLASRRTMPGQMPMGYLPFMMPPPQANMMRMG--N 407
Query: 216 RGPGSQGRRGGLRRSSQGRGRG----QGQGRGRGRGG-GGGGGRGRGRGRGRGQGKKNPV 270
R P + ++ Q + + G RGRGRG G GRGRG+G QG+ P+
Sbjct: 408 RFPPMFMMQQQQQQQQQQQQQHAPGMNGNMRGRGRGNPNKGNGRGRGQGPMPSQGQPMPM 467
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALKRY 159
LYV +LHP VT + E FS++G + + D R S G A V Y + +DA AL+
Sbjct: 10 LYVGDLHPEVTEATLYEFFSQMGSVISIRVCRDAVSRQSLGYAYVNYQQHADAKHALEEL 69
Query: 160 NNVLLDGKPMKI 171
N + KP +I
Sbjct: 70 NFEKIHDKPCRI 81
>gi|345564008|gb|EGX46990.1| hypothetical protein AOL_s00097g229 [Arthrobotrys oligospora ATCC
24927]
Length = 516
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
++V NL +NDD+ ELF+ IG+++R I ++ +GR G+ V + +A A+ ++
Sbjct: 419 IFVRNLPWSTSNDDLVELFTTIGKVERAEIQYEPSGRSRGTGVVQFDTAENAETAISKFT 478
Query: 161 NVLLDGKPMKIEVV 174
G+P+ + V
Sbjct: 479 GYQYGGRPLGLSFV 492
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+++VSNL V D++++F + G + R +H +GRP GS V + DA A++++
Sbjct: 246 QIFVSNLPFHVGWQDLKDMFRQAGSVVRADVHVGHDGRPKGSGIVAFETPEDARNAIQQF 305
Query: 160 NNVLLDGKPMKI 171
N G+ +++
Sbjct: 306 NGHDWQGRTLEV 317
>gi|358394283|gb|EHK43676.1| hypothetical protein TRIATDRAFT_300154 [Trichoderma atroviride IMI
206040]
Length = 505
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAF 153
G E +YV NL +NDD+ ELF+ IG++++ I ++ +GR GS V + A
Sbjct: 400 GTERNEIIYVRNLPWSTSNDDLVELFTTIGKVEQAEIQYEPSGRSRGSGVVRFDSIDTAD 459
Query: 154 AALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 460 TAIAKFQGYQYGGRPLHLSFV 480
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF + IG + R +H +GRP GS VV+ DA A+
Sbjct: 232 QIYVANLPYTVGWQDLKDLFRQAARIGGVMRADVHLGADGRPKGSGIVVFENPEDARNAI 291
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 292 QQFNGYEWQGRLLEV 306
>gi|322707987|gb|EFY99564.1| RNP domain-containing protein [Metarhizium anisopliae ARSEF 23]
Length = 430
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G E +YV NL +NDD+ +LF+ IG++++ I ++ +GR G+ V + A
Sbjct: 324 AGTEKSETIYVRNLPWSTSNDDLVDLFTTIGKVEQAEIQYEPSGRSRGTGVVRFDTAETA 383
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 384 ETAIAKFQGYQYGGRPLNLSFV 405
>gi|226293434|gb|EEH48854.1| RNP domain-containing protein [Paracoccidioides brasiliensis Pb18]
Length = 478
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
SG E ++V NL N+D+ +LFS IG+++R I ++ NGR G+ V + +A
Sbjct: 371 SGGERSAIIFVRNLPWSTCNEDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVEFDSVENA 430
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 431 ETAINKFTGYQYGGRPLGLTFV 452
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YVSNL V D+++LF ++ G + R +H D +GRP GS V + DA A+
Sbjct: 214 QIYVSNLPFSVGWQDLKDLFRQAAQQGAVVRADVHVDPSGRPKGSGIVAFESADDARNAI 273
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 274 QQFNGYDWQGRTLEV 288
>gi|392564615|gb|EIW57793.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 399
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L++S LH + D+R F G ++R I DKNGR G A +V+ R D AA K +
Sbjct: 125 LFISRLHKNASESDLRREFESFGSIERVRIVRDKNGRSRGYAFIVFERERDMKAAYKESD 184
Query: 161 NVLLDGKPMKIEV 173
+ + GK + ++V
Sbjct: 185 RLHIMGKRVLVDV 197
>gi|449471540|ref|XP_004176973.1| PREDICTED: LOW QUALITY PROTEIN: myelin expression factor 2
[Taeniopygia guttata]
Length = 571
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Query: 57 SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIE---VGTKLYVSNLHPGVTND 113
S+A P + S N P + IS ++ +G+ ++V+NL V
Sbjct: 172 SDAAPGMMNLPPSILNNPNIPPEV-----------ISNLQAGRLGSTIFVANLDFKVGWK 220
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
++E+FS G +KR I DK+G+ G V + + +A A+ +N L +PM +++
Sbjct: 221 KLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 280
>gi|322701869|gb|EFY93617.1| RNP domain protein [Metarhizium acridum CQMa 102]
Length = 408
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G E +YV NL +NDD+ +LF+ IG++++ I ++ +GR G+ V + A
Sbjct: 302 AGTEKSETIYVRNLPWSTSNDDLVDLFTTIGKVEQAEIQYEPSGRSRGTGVVRFDTADTA 361
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 362 ETAIAKFQGYQYGGRPLNLSFV 383
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL + D+++LF + +G + R +H +GRP GS VV+ DA A+
Sbjct: 151 QIYVANLPFNIGWQDLKDLFRQAARVGGVIRADVHIGPDGRPKGSGIVVFENPDDARNAI 210
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 211 QQFNGYDWQGRMLEV 225
>gi|148236313|ref|NP_001090142.1| myelin expression factor 2 [Xenopus laevis]
gi|80477220|gb|AAI08588.1| MGC131089 protein [Xenopus laevis]
Length = 673
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+GT ++V+NL V ++E+F G +KR I DK+G+ G V + + +A A+
Sbjct: 263 LGTTIFVANLDFKVGWKKLKEVFCISGTVKRADIKEDKDGKSRGMGTVTFEQPIEAVQAI 322
Query: 157 KRYNNVLLDGKPMKIEV 173
+N L +PM +++
Sbjct: 323 SMFNGQFLFDRPMHVKM 339
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H +T +DI+ +F GEL+ + D+ GR G V + + A AL++
Sbjct: 269 RLYVGNIHFSITENDIQNVFEPFGELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKM 328
Query: 160 NNVLLDGKPMKI 171
N L G+P+++
Sbjct: 329 NGFDLAGRPIRV 340
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H +T D++ +F GEL+ + D NGR G V + A AL++
Sbjct: 283 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKM 342
Query: 160 NNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPG 219
N L G+P+++ +G + P + G+ S AGG RGP
Sbjct: 343 NGFDLAGRPIRVG-LGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGG-----RGPA 396
Query: 220 -SQGRRGGLRRSSQGRG 235
S R G R + +G G
Sbjct: 397 TSNFDRAGARDNEKGTG 413
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H +T D++ +F GEL+ + D NGR G V + A AL++
Sbjct: 282 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKM 341
Query: 160 NNVLLDGKPMKI 171
N L G+P+++
Sbjct: 342 NGFDLAGRPIRV 353
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H +T D++ +F GEL+ + D NGR G V + A AL++
Sbjct: 283 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKM 342
Query: 160 NNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPG 219
N L G+P+++ +G + P + G+ S AGG RGP
Sbjct: 343 NGFDLAGRPIRVG-LGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGG-----RGPA 396
Query: 220 -SQGRRGGLRRSSQGRG 235
S R G R + +G G
Sbjct: 397 TSNFDRAGARDNEKGTG 413
>gi|146414409|ref|XP_001483175.1| hypothetical protein PGUG_05130 [Meyerozyma guilliermondii ATCC
6260]
Length = 198
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 15/115 (13%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
RPS Y I K+ R + F+D R+ +YV NL T + + ELF
Sbjct: 17 RPSQYLIKKALRS--------NFFDDLKRSMH------SKTVYVGNLSHFTTEEQVHELF 62
Query: 120 SEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
+ G + R + D++ P G V+Y S + A+K LD + ++I++
Sbjct: 63 LKCGRIDRIIMGLDRHRLTPCGFCFVIYKEESGSLNAMKYLKGTSLDSQNLEIDL 117
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H +T D++ +F GEL+ + D NGR G V + A AL++
Sbjct: 283 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKM 342
Query: 160 NNVLLDGKPMKI 171
N L G+P+++
Sbjct: 343 NGFDLAGRPIRV 354
>gi|340518827|gb|EGR49067.1| predicted protein [Trichoderma reesei QM6a]
Length = 493
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G E +YV NL +NDD+ ELF+ IG++++ I ++ +GR G+ V + A
Sbjct: 387 AGTERSEIIYVRNLPWSTSNDDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRFDSPETA 446
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 447 ETAIAKFQGYQYGGRPLNLSFV 468
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF + IG + R +H +GRP GS VV+ DA +A+
Sbjct: 223 QIYVANLPYNVGWQDLKDLFRQAARIGGVLRADVHTGPDGRPKGSGIVVFESPDDARSAI 282
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 283 QQFNGYDWQGRLLEV 297
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H +T D++ +F GEL+ + D +GR G V + + A AL++
Sbjct: 274 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKM 333
Query: 160 NNVLLDGKPMKI 171
N L G+P+++
Sbjct: 334 NGFDLAGRPIRV 345
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H +T D++ +F GEL+ + D +GR G V + + A AL++
Sbjct: 274 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKM 333
Query: 160 NNVLLDGKPMKI 171
N L G+P+++
Sbjct: 334 NGFDLAGRPIRV 345
>gi|440793308|gb|ELR14495.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 310
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAALKR 158
KL+V NL V + +RE+F + G+L R + +D+ +P G A V Y + +D+ ALKR
Sbjct: 83 KLHVGNLTRNVNEEHLREIFGQWGKLLRVELGWDRRIDQPKGFAYVEYDKYADSVEALKR 142
Query: 159 YNNVLLDGKPMKIEVV 174
+ +DG +K++ +
Sbjct: 143 MDGGQIDGNVVKVQAI 158
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H +T D++ +F GEL+ + D +GR G V + + A AL++
Sbjct: 274 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKM 333
Query: 160 NNVLLDGKPMKI 171
N L G+P+++
Sbjct: 334 NGFDLAGRPIRV 345
>gi|341038862|gb|EGS23854.1| putative RNA annealing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 277
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 115 IRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
+ E F + +G++K+ + + G G A V + A A N +L+D KP+K+EV
Sbjct: 114 LEEYFQQSVGQVKKVELSYGPGGVSRGIAHVTFHHADGASKAFASLNGLLIDNKPVKVEV 173
Query: 174 VGTNAEI-----PLQARVNVTGVNGRRKRTVVMTSGSGNAGG 210
V NA++ PL AR+ + TV T+G+ G
Sbjct: 174 VVANADLIPQPKPLAARIAQPKAQPKSAATVKNTNGNKEGGA 215
>gi|302505912|ref|XP_003014913.1| hypothetical protein ARB_06670 [Arthroderma benhamiae CBS 112371]
gi|291178484|gb|EFE34273.1| hypothetical protein ARB_06670 [Arthroderma benhamiae CBS 112371]
Length = 236
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
+ELF+ IG + A+ +D+ GR G+A V Y R SDA A+ ++ G+P+++ +V
Sbjct: 11 TQELFTRIGPVYSVALLYDRAGRSEGTAFVTYKRLSDAETAIHEFDGANAKGQPIRLTLV 70
Query: 175 GTNA 178
+ A
Sbjct: 71 PSAA 74
>gi|389647175|ref|XP_003721219.1| hypothetical protein MGG_02580 [Magnaporthe oryzae 70-15]
gi|351638611|gb|EHA46476.1| hypothetical protein MGG_02580 [Magnaporthe oryzae 70-15]
Length = 331
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 42/76 (55%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
TK+ + L VT D +R++F + GE++ + ++ G G+A ++Y + DA +A+
Sbjct: 99 TKIVIERLTKNVTEDHLRDIFGQYGEIRDLDLPINRQGTNRGTAYILYVQEPDAESAIAH 158
Query: 159 YNNVLLDGKPMKIEVV 174
+ +DG + + +V
Sbjct: 159 MHEGQIDGATVNVSIV 174
>gi|159474566|ref|XP_001695396.1| RNA-binding protein [Chlamydomonas reinhardtii]
gi|158275879|gb|EDP01654.1| RNA-binding protein [Chlamydomonas reinhardtii]
Length = 704
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALKR 158
KL+V N+ T D + LF IG++ I +DK S GSA V YA R+DA A+ +
Sbjct: 321 KLFVGNIPKSCTEDQLLPLFQSIGKVVELVIVYDKVTHESKGSAFVWYANRADAERAIIQ 380
Query: 159 YN 160
+N
Sbjct: 381 FN 382
>gi|406862056|gb|EKD15108.1| RNP domain protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 397
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G E +YV NL +N+D+ ELF+ IG++++ I ++ NGR G+ V + A
Sbjct: 294 AGSERSEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRFDSAEGA 353
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+++++ G+P+ + V
Sbjct: 354 DTAIEKFSGYQYGGRPLGLSFV 375
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YVSNL V D+++LF + G + R +H +GRP GS V + DA A+
Sbjct: 134 QIYVSNLPYTVGWQDLKDLFRQAARNGAVVRADVHLGPDGRPKGSGIVAFEHPDDARNAI 193
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+P+++
Sbjct: 194 QQFNGYDWQGRPLEV 208
>gi|357017625|gb|AET50841.1| hypothetical protein [Eimeria tenella]
Length = 240
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+++VSNL + ++++LF E GE+ R + GR G V++A R A A+ +
Sbjct: 162 QIFVSNLPWKTSWHELKDLFRECGEVIRADVMETPGGRSKGVGTVLFASRESAQNAIDTF 221
Query: 160 NNVLLDGKPMKI 171
NN +LDG+ + +
Sbjct: 222 NNYVLDGRQISV 233
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G +YV NL GV ++++ S+ GE+ R + D GR G VVY A A+K
Sbjct: 28 GCSVYVGNLAWGVRAAELQQHMSQAGEVVRADVFEDYQGRSKGCGIVVYKSEEAAQRAIK 87
Query: 158 RYNNVLLDGKPMKI 171
+ +L +P+ +
Sbjct: 88 ELTDTVLLERPIFV 101
>gi|154300366|ref|XP_001550599.1| hypothetical protein BC1G_11372 [Botryotinia fuckeliana B05.10]
Length = 493
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRS 150
+G E +YV NL +N+D+ ELF+ IG++++ I ++ NGR G+ V +
Sbjct: 385 ATAGTERSEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRFDSAE 444
Query: 151 DAFAALKRYNNVLLDGKPMKIEVV 174
+A A+++++ G+P+ + V
Sbjct: 445 NADTAIEKFSGYQYGGRPLGLSFV 468
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YVSNL V D+++LF + G + R +H +GRP GS V + DA A+
Sbjct: 230 QIYVSNLPYTVGWQDLKDLFRGAARNGAVVRADVHVGPDGRPKGSGIVAFESPDDARNAI 289
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+P+++
Sbjct: 290 QQFNGYDWQGRPLEV 304
>gi|46136649|ref|XP_390016.1| hypothetical protein FG09840.1 [Gibberella zeae PH-1]
Length = 591
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G +YV NL +NDD+ ELF+ IG++++ I ++ +GR G+ V + A A+
Sbjct: 391 GEIIYVRNLPWSTSNDDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRFDSAETAETAIT 450
Query: 158 RYNNVLLDGKPMKIEVV 174
++ G+P+ + V
Sbjct: 451 KFQGYQYGGRPLNLSFV 467
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF + G + R +H +GRP GS VV+ DA A+
Sbjct: 230 QIYVANLPFNVGWQDLKDLFRQAARTGAVIRADVHIGPDGRPKGSGIVVFESPDDARNAI 289
Query: 157 KRYNNVLLDGKPMKI 171
++N G+ +++
Sbjct: 290 GQFNGYDWQGRVIEV 304
>gi|169864290|ref|XP_001838756.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
gi|116500176|gb|EAU83071.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
Length = 380
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L+++ LH T D+R F G ++R I DKNGR G A +VY R D AA K +
Sbjct: 121 LFIARLHKSATETDLRREFEGYGTIERVRIVRDKNGRSRGYAFIVYERERDMKAAYKESD 180
Query: 161 NVLLDGKPMKIEV 173
+ + GK + ++V
Sbjct: 181 GLHIMGKRILVDV 193
>gi|293332553|ref|NP_001169063.1| uncharacterized protein LOC100382904 [Zea mays]
gi|223974745|gb|ACN31560.1| unknown [Zea mays]
Length = 426
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+YV NL N+D+ +LF+ IG+++R I ++ NGR G+ V + A A+ ++
Sbjct: 326 IYVRNLPWSTCNEDLVDLFTTIGKVERAEIQYEGNGRSRGTGVVEFDSPETAETAISKFT 385
Query: 161 NVLLDGKPMKIEVV 174
G+P+ I V
Sbjct: 386 GYQYGGRPLGITFV 399
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++Y++NL V D+++LF ++ G + R + D +GRP G+ VV+ DA A+
Sbjct: 156 QIYITNLPFNVGWQDLKDLFRQAAQQGAVIRADVLSDPSGRPKGTGIVVFESPDDARVAI 215
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 216 QQFNGYDWQGRILEV 230
>gi|402222407|gb|EJU02474.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 554
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV NL D+++LF + G + R I+F +GRP GS V+Y +DA AA+ +
Sbjct: 275 QLYVGNLPYQAGWQDLKDLFRQAGNIIRADINFGADGRPKGSGVVIYETAADAQAAISMF 334
Query: 160 NNVLLDGKPMKI 171
+ G+ +++
Sbjct: 335 SGYDWYGRQLEV 346
>gi|356565990|ref|XP_003551218.1| PREDICTED: uncharacterized protein LOC100819953 [Glycine max]
Length = 457
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 16/90 (17%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKR--------------YAIHFDKNGRPSGSAEV 144
+++Y+SNL P VT +++RELF IG++ R I+ D NG G A +
Sbjct: 317 SRIYISNLPPDVTIEELRELFGGIGQVGRIKQKRGYKDQWPWNIKIYTDDNGNNKGDACL 376
Query: 145 VYARRSDAFAALKRYNNVLLDGKPMKIEVV 174
Y S A +A YNN L G KI V
Sbjct: 377 AYEDPSAAHSAGGFYNNYDLRG--YKISVA 404
>gi|58269762|ref|XP_572037.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134113845|ref|XP_774507.1| hypothetical protein CNBG1520 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257145|gb|EAL19860.1| hypothetical protein CNBG1520 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228273|gb|AAW44730.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 200
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 100 KLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
K+ +SNL VT +R+L S +G +K + + G+ +G A VV+ + DA A
Sbjct: 67 KIIISNLPSDVTEAAVRDLMQSTVGPVKSVQMSYTATGKSTGIATVVFRNKGDARKAHAS 126
Query: 159 YNNVLLDGK-PMKIEVV--GTNAEIPLQARVNVTGVNGRRKR 197
Y+N ++D + PMK+E+ A+ L RV V +++R
Sbjct: 127 YHNRMIDNQRPMKVELAIDPNQAQSSLVNRVAPAPVQPQKRR 168
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum CS3096]
Length = 128
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRSDAFAALK 157
+KLYV NL T+D +R+ FSE GE+ I D+ GR G V ++ A AA+
Sbjct: 2 SKLYVGNLSWNTTDDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFVTFSTEEQANAAVD 61
Query: 158 RYNNVLLDGKPMKIEV 173
N LDG+ +++ V
Sbjct: 62 ALNEQELDGRRIRVNV 77
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAALK 157
+KLYV NL T++ +R+ FSE GE+ I D++ GR G V ++ A AA+
Sbjct: 2 SKLYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVD 61
Query: 158 RYNNVLLDGKPMKIEV 173
N LDG+ +++ V
Sbjct: 62 ALNEQELDGRRIRVNV 77
>gi|405121707|gb|AFR96475.1| hypothetical protein CNAG_03249 [Cryptococcus neoformans var.
grubii H99]
Length = 200
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 100 KLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
K+ +SNL VT +R+L S +G +K + + G+ +G A VV+ + DA A
Sbjct: 67 KIIISNLPSDVTEAAVRDLMQSTVGPVKSVQMSYTATGKSTGIATVVFRNKGDARKAHAS 126
Query: 159 YNNVLLDGK-PMKIEVV--GTNAEIPLQARVNVTGVNGRRKR 197
Y+N ++D + PMK+E+ A L RV V ++KR
Sbjct: 127 YHNRMIDNQRPMKVELAIDPNQARSSLVNRVAPAPVQPQKKR 168
>gi|393212214|gb|EJC97716.1| hypothetical protein FOMMEDRAFT_162739 [Fomitiporia mediterranea
MF3/22]
Length = 250
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKR-------------YAIHFDKNGRPSGSAE 143
+ ++L VSNLH +T D+ +F +IG L R H+D++GR +G A
Sbjct: 48 LNSRLVVSNLHYEITAKDLIAIFGQIGTLVREPDIKVRFPSSLMVIEHYDRSGRSTGVAL 107
Query: 144 VVYARRSDAFAALKRYNNVLLDGKPMKI 171
+ + +A A ++N +L G+PM++
Sbjct: 108 LQFETPVEATRAKNQFNKILAKGQPMEV 135
>gi|448522334|ref|XP_003868660.1| Yra1 protein [Candida orthopsilosis Co 90-125]
gi|380353000|emb|CCG25756.1| Yra1 protein [Candida orthopsilosis]
Length = 224
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 20/189 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D SLDDII S KKS + R R G RG V G ++ G + + R
Sbjct: 1 MSASLDKSLDDIISSSKKSFKSR---RPSAKIGGARGNQNKV-GKKLVGNKTKKTATFKR 56
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF- 119
P N P + A + TK+ V+ L + D+IRE F
Sbjct: 57 P-------------NGPKPAAATTAAAAAVPAFDLSYATKVNVTGLPKDLKQDNIREFFQ 103
Query: 120 SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG--KPMKIEVVGTN 177
S++G ++ A+ +++ G+ G A V++ +A A+++Y+ +DG + +E++
Sbjct: 104 SQVGGVQTVALSYNERGQFKGVATVIFRSNKNAALAVEKYHGASIDGGKGKLSLELIIDT 163
Query: 178 AEIPLQARV 186
+ PL AR+
Sbjct: 164 TKKPLAARI 172
>gi|302685085|ref|XP_003032223.1| hypothetical protein SCHCODRAFT_15811 [Schizophyllum commune H4-8]
gi|300105916|gb|EFI97320.1| hypothetical protein SCHCODRAFT_15811 [Schizophyllum commune H4-8]
Length = 399
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L++S LH T D+R F G ++R I DK GR G A +VY R D A K +
Sbjct: 116 LFISRLHKNATESDLRREFESYGMIERVRIVRDKQGRSRGYAFIVYERERDMKTAYKESD 175
Query: 161 NVLLDGKPMKIEV 173
+++ GK + ++V
Sbjct: 176 GLVILGKRILVDV 188
>gi|408390063|gb|EKJ69476.1| hypothetical protein FPSE_10356 [Fusarium pseudograminearum CS3096]
Length = 564
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G +YV NL +NDD+ ELF+ IG++++ I ++ +GR G+ V + A A+
Sbjct: 463 GEIIYVRNLPWSTSNDDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRFDSAETAETAIT 522
Query: 158 RYNNVLLDGKPMKIEVV 174
++ G+P+ + V
Sbjct: 523 KFQGYQYGGRPLNLSFV 539
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF + G + R +H +GRP GS VV+ DA A+
Sbjct: 301 QIYVANLPFNVGWQDLKDLFRQAARTGAVIRADVHIGPDGRPKGSGIVVFESPDDARNAI 360
Query: 157 KRYNNVLLDGKPMKI 171
++N G+ +++
Sbjct: 361 GQFNGYDWQGRVIEV 375
>gi|429852984|gb|ELA28088.1| rnp domain-containing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 415
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G + G +YV NL +N+D+ ELF+ IG++++ I ++ +GR G+ V + A
Sbjct: 308 AGTDRGETIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRFDSADTA 367
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 368 ETAIAKFQGYQYGGRPLGLSFV 389
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF + G + R +H +GRP GS VV+ DA A+
Sbjct: 165 QIYVANLPYTVGWQDLKDLFRQAARNGVVIRADVHLGPDGRPKGSGIVVFENPDDARTAI 224
Query: 157 KRY 159
+++
Sbjct: 225 QQF 227
>gi|302830043|ref|XP_002946588.1| hypothetical protein VOLCADRAFT_79141 [Volvox carteri f.
nagariensis]
gi|300268334|gb|EFJ52515.1| hypothetical protein VOLCADRAFT_79141 [Volvox carteri f.
nagariensis]
Length = 284
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR-PSGSAEVVYARRSD 151
+ + T +YV NL + + ++F +G +KR + DK R P G A +Y R D
Sbjct: 25 NALATSTTIYVGNLAFTTREEQLYDVFGRVGHIKRIVMGLDKIQRTPCGFAFAIYYTRKD 84
Query: 152 AFAALKRYNNVLLDGKPMKIEV 173
A A+ N L+D + +++++
Sbjct: 85 AEEAVAFLNGTLVDDRAIRVDL 106
>gi|126002576|ref|XP_001382208.1| GA19037 [Drosophila pseudoobscura pseudoobscura]
gi|195146834|ref|XP_002014389.1| GL18979 [Drosophila persimilis]
gi|54640338|gb|EAL29321.1| GA19037 [Drosophila pseudoobscura pseudoobscura]
gi|194106342|gb|EDW28385.1| GL18979 [Drosophila persimilis]
Length = 196
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GT++YV NL V DD+ F++ G+L I F+ P G A V + R DA A
Sbjct: 9 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFN----PPGFAFVEFEHRDDAEKACD 64
Query: 158 RYNNVLLDGKPMKIEV 173
N L G +++E+
Sbjct: 65 ILNGSELLGSQLRVEI 80
>gi|299115255|emb|CBN74097.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1023
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
KL +SNLH V+ D + FS G + R I +GR G A V + +S A A+ +
Sbjct: 54 VKLLISNLHYEVSLDLLASEFSTCGAVMRCRIINGPDGRSRGVAFVSFGEKSSADRAISK 113
Query: 159 YNNVLLDGKPMKIEVVGTNAE 179
Y++ L G+ +++ + N E
Sbjct: 114 YHDRLFRGRKLQVTISSKNDE 134
>gi|409048430|gb|EKM57908.1| hypothetical protein PHACADRAFT_251839 [Phanerochaete carnosa
HHB-10118-sp]
Length = 386
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L+++ LH T D+R F G ++R I DKNGR G A +V+ R D AA K +
Sbjct: 120 LFIARLHKSATEGDLRREFEGFGSIERVRIVRDKNGRSQGYAFIVFERERDMKAAYKESD 179
Query: 161 NVLLDGKPMKIEV 173
+ + GK + ++V
Sbjct: 180 RLHIMGKRVLVDV 192
>gi|307103841|gb|EFN52098.1| hypothetical protein CHLNCDRAFT_59028 [Chlorella variabilis]
Length = 634
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSA 142
FE+ LR+ I+ + G LYV NLH + ++ +R FS+ G + + D G+ G
Sbjct: 308 FEE-LRSERIAKYQ-GMNLYVKNLHDDIDDETLRTEFSQFGTITSAKVMVDSAGKSRGFG 365
Query: 143 EVVYARRSDAFAALKRYNNVLLDGKPMKI 171
V YA +A A+ N ++ GKP+ +
Sbjct: 366 FVCYASPEEATRAVTEMNGRMIKGKPIYV 394
>gi|225684043|gb|EEH22327.1| RNP domain-containing protein [Paracoccidioides brasiliensis Pb03]
Length = 314
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
++V NL N+D+ +LFS IG+++R I ++ NGR G+ V + +A A+ ++
Sbjct: 215 IFVRNLPWSTCNEDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVEFDSVENAETAINKFT 274
Query: 161 NVLLDGKPMKIEVV 174
G+P+ + V
Sbjct: 275 GYQYGGRPLGLTFV 288
>gi|294896748|ref|XP_002775712.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239881935|gb|EER07528.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 1162
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 39/142 (27%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
KL+V NL P T++ +RE+F + G + + +D G+ A V Y+ DA+A L+
Sbjct: 251 KLFVYNLAPYTTSETLREVFGKYGPMDECIVVYDSAGKSKRYAFVTYSNVEDAWACLE-- 308
Query: 160 NNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAG------GAAA 213
+P K V+GR T + + GSG G A
Sbjct: 309 -------EPHK-------------------TVDGRMTFTHLASEGSGEYGNRRSRSNFAG 342
Query: 214 INRGP-----GSQGRRGGLRRS 230
NRGP GR G+ RS
Sbjct: 343 TNRGPPLRGHSPIGRSAGIPRS 364
>gi|326496949|dbj|BAJ98501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 285
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALK 157
+ +YVSNL +TN D+ LFS G++ R + D+ R S G A V++ RR DA AA
Sbjct: 73 STVYVSNLDFALTNSDLHTLFSRFGKVARVTVLKDRESRRSRGVAFVLFVRREDAAAAAA 132
Query: 158 RYNNVLLDGKPMKIEVVGTN 177
+ +L+G+ + + N
Sbjct: 133 EMHGKVLNGRTLAASIAEDN 152
>gi|154278026|ref|XP_001539839.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413424|gb|EDN08807.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 434
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 98 GTKLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
G ++YVSNL V D+++LF ++ G + R +H D +GRP GS V + DA
Sbjct: 217 GRQIYVSNLPFNVGWQDLKDLFRQAAQHGAVVRADVHVDPSGRPKGSGIVAFESADDARN 276
Query: 155 ALKRYNNVLLDGKPMKI 171
A++++N G+ +++
Sbjct: 277 AIQQFNGYDWQGRTLEV 293
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGS 141
SG E +YV NL N+D+ +LFS IG++++ I ++ NGR G+
Sbjct: 371 ATSGGERSATIYVRNLPWSTCNEDLVDLFSTIGKVEKAEIQYEPNGRSRGT 421
>gi|212534696|ref|XP_002147504.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
gi|210069903|gb|EEA23993.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
Length = 434
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+YV NL N+D+ +LF+ IG+++R I ++ NGR G+ V + A A+ ++
Sbjct: 334 IYVRNLPWSTCNEDLVDLFTTIGKVERAEIQYEGNGRSRGTGVVEFDSPETAETAISKFT 393
Query: 161 NVLLDGKPMKIEVV 174
G+P+ I V
Sbjct: 394 GYQYGGRPLGITFV 407
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++Y++NL V D+++LF ++ G + R + D +GRP G+ VV+ DA A+
Sbjct: 158 QIYITNLPFNVGWQDLKDLFRQAAQQGAVIRADVLSDPSGRPKGTGIVVFESADDARVAI 217
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 218 QQFNGYDWQGRILEV 232
>gi|170099527|ref|XP_001880982.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644507|gb|EDR08757.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 379
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L++S LH T D+R F G ++R I DK GR G A VVY R D AA K +
Sbjct: 111 LFISRLHKTATETDLRREFEGYGTIERVRIVRDKKGRSRGYAFVVYERERDMKAAYKESD 170
Query: 161 NVLLDGKPMKIEV 173
+ + GK + ++V
Sbjct: 171 GLHIMGKRILVDV 183
>gi|71018001|ref|XP_759231.1| hypothetical protein UM03084.1 [Ustilago maydis 521]
gi|46098852|gb|EAK84085.1| hypothetical protein UM03084.1 [Ustilago maydis 521]
Length = 596
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+++V NL +N+D+ ELF G++ I GR G V +A DA A+ ++
Sbjct: 481 QIFVKNLPWSTSNEDLVELFQTTGKVDEAEIVI-GGGRSKGCGVVQFATVEDAETAIAKF 539
Query: 160 NNVLLDGKPMKIEV 173
NN + G+P+ IE
Sbjct: 540 NNYVYGGRPLDIEF 553
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
T+L++ NL V+ D+++LF G + R I+ +GR GS V YA +DA A+
Sbjct: 302 TQLFIGNLPFDVSWQDLKDLFRSAGNITRADINMGHDGRSKGSGIVAYADSNDASNAIAM 361
Query: 159 YNNVLLDGKPMKI 171
Y+ G+ +++
Sbjct: 362 YHGYEFRGRMLEV 374
>gi|414590139|tpg|DAA40710.1| TPA: hypothetical protein ZEAMMB73_970290 [Zea mays]
Length = 490
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELK--------RYAIHFDK-NGRPSGSAEVVYARRSD 151
+YV NL PG + + E F IG LK + I+ DK + P G A V Y
Sbjct: 60 VYVCNLPPGTDENMLAEYFGTIGLLKKDKRNGRPKIWIYRDKVSNEPKGDATVTYEDPHA 119
Query: 152 AFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNG 193
A AA++ +NN G +++ + + ++ N+ + G
Sbjct: 120 ASAAVEWFNNKDFHGSTIQVHIAESKSKDAFDNPTNLNTIAG 161
>gi|392561626|gb|EIW54807.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 415
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAF 153
G+ G +LYV NL D+++LF G + R I+ +GRP GS V++ DA
Sbjct: 135 GLNPGNQLYVGNLPYQAGWQDLKDLFRSAGNIIRADINIGLDGRPKGSGTVIFETAKDAQ 194
Query: 154 AALKRYNNVLLDGKPMKI 171
A+ YN G+ +++
Sbjct: 195 QAISMYNGFDWYGRTLEV 212
>gi|295665073|ref|XP_002793088.1| hypothetical protein PAAG_05224 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226278609|gb|EEH34175.1| hypothetical protein PAAG_05224 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 281
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 44/172 (25%)
Query: 115 IRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
I E F + G +K+ + +++NG G A + + R A A K N +L+D +P+KIEV
Sbjct: 121 IAEYFHKSAGPVKKVMLTYNQNGTSRGIAAITFVRPDTAAKAAKELNGLLIDKRPIKIEV 180
Query: 174 VGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQG 233
V L A +R P + R +Q
Sbjct: 181 V-------LDA------------------------------SRAPTVPAVKPLTERVAQP 203
Query: 234 RGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYH 285
+ + + + G RGR R RGR G+ P K+ +LD E+++Y
Sbjct: 204 KPQPKPVSATK---GSAASKRGRPR-RGRNAGRPKP--KTVAELDAEMEDYF 249
>gi|440467309|gb|ELQ36539.1| RNP domain-containing protein [Magnaporthe oryzae Y34]
gi|440478902|gb|ELQ59700.1| RNP domain-containing protein [Magnaporthe oryzae P131]
Length = 500
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G + +YV NL +N+D+ ELF+ IG++++ I ++ +GR GS V + A
Sbjct: 394 AGADRSETIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPSGRSRGSGVVRFDNAETA 453
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
++ ++ G+P+ + V
Sbjct: 454 ETSIAKFQGYQYGGRPLNLSFV 475
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARR 149
SG G +++V+NL V ++++LF + +G + R IH + RP GS V+Y
Sbjct: 230 SGPPQGRQVFVNNLPYNVDWREMKDLFRQAARVGGVHRADIHMTPDNRPKGSGIVIYDHP 289
Query: 150 SDAFAALKRYNNVLLDGKPMKI 171
DA A++++N G+ +++
Sbjct: 290 DDANNAIQQFNGYEWYGRTIEV 311
>gi|346975651|gb|EGY19103.1| RNP domain-containing protein [Verticillium dahliae VdLs.17]
Length = 458
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 45/82 (54%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G + +YV NL +N+D+ ELF+ IG++++ I ++ +GR G+ V + A
Sbjct: 350 AGTDKSEVIYVRNLPWSTSNEDLVELFTTIGKVEKAEIQYEPSGRSRGTGVVQFDAADTA 409
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A++++ G+P+ + V
Sbjct: 410 DTAIQKFQGYQYGGRPLGLSFV 431
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++Y++NL V D+++LF + G + R +H +GRP G+ V++ DA A+
Sbjct: 189 QIYITNLPYTVGWQDLKDLFRQAARNGAVIRADVHLGPDGRPKGTGIVMFESPDDARIAI 248
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 249 EQFNGYDWQGRLLEV 263
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H +T D++ +F GEL+ + D +GR G V + A AL++
Sbjct: 282 RLYVGNIHFSITETDLQNVFEPFGELEFVQLQKDDSGRSRGYGFVQFRDAGQAREALEKM 341
Query: 160 NNVLLDGKPMKI 171
N L G+P+++
Sbjct: 342 NGFDLAGRPIRV 353
>gi|115480531|ref|NP_001063859.1| Os09g0549500 [Oryza sativa Japonica Group]
gi|50725127|dbj|BAD33744.1| putative MADP-1 protein [Oryza sativa Japonica Group]
gi|50726297|dbj|BAD33872.1| putative MADP-1 protein [Oryza sativa Japonica Group]
gi|113632092|dbj|BAF25773.1| Os09g0549500 [Oryza sativa Japonica Group]
Length = 274
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALK 157
+ +YVSNL +TN D+ LFS G + R + D++ R S G A V++ RR DA AA
Sbjct: 70 STVYVSNLDFALTNSDLHTLFSRFGRVARVTVLKDRDSRRSRGVAFVLFVRREDAAAAAA 129
Query: 158 RYNNVLLDGKPMKIEVVGTN 177
+ +L+G+ + + N
Sbjct: 130 EMHGKVLNGRTLSASIAEDN 149
>gi|145349140|ref|XP_001418998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579228|gb|ABO97291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 572
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G LY+ NL G ++ +RELF E G + + D +G GSA V ++ +A A+
Sbjct: 317 GANLYIKNLEDGTDDEKLRELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPDEATRAVT 376
Query: 158 RYNNVLLDGKPMKIEV 173
N ++ KP+ + +
Sbjct: 377 EMNGKMVGAKPLYVAL 392
>gi|422292984|gb|EKU20285.1| RNA-binding protein with serine-rich domain 1, partial
[Nannochloropsis gaditana CCMP526]
Length = 374
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAALKR 158
KL+VS L VT + + E+F+ G+L R + D+ G G A V Y R DA A
Sbjct: 103 KLHVSGLTRNVTEEHLNEIFATFGKLSRVELVLDRRVGLSRGFAYVEYDHRKDAEEAQLY 162
Query: 159 YNNVLLDGKPMKIEVV 174
+ LDG P+K+ V
Sbjct: 163 MDGGQLDGAPLKVNFV 178
>gi|409048188|gb|EKM57666.1| hypothetical protein PHACADRAFT_251433 [Phanerochaete carnosa
HHB-10118-sp]
Length = 542
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G G +LYV NL D+++LF G + R I+ +GRP GS V++ DA
Sbjct: 270 AGTNPGNQLYVGNLPYQAGWQDLKDLFRSAGNIIRADINIGADGRPKGSGTVIFETAKDA 329
Query: 153 FAALKRYNNVLLDGKPMKI 171
A+ YN G+ +++
Sbjct: 330 QQAIGMYNGFEWYGRTLEV 348
>gi|405121645|gb|AFR96413.1| hypothetical protein CNAG_03186 [Cryptococcus neoformans var.
grubii H99]
Length = 264
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 44/187 (23%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSV-SGGRMTGAARRGPLSNARPSS 63
VD SLDDII +++ + + + R GP S + R T AR P
Sbjct: 3 VDKSLDDIIADKRQPKPQPQR--------RPHGPRHSAGNTPRQTPYARPPP-------- 46
Query: 64 YTIAKSFRRTRNFPWQHDLFE--------DSLRAAGISGIEVGT----------KLYVSN 105
R+ + W HD + S A + + + T ++ +
Sbjct: 47 --------RSTSEKWTHDAYRGPGATRGGRSAAAPSRAPVPLTTGSPVFSRESPRIEIIG 98
Query: 106 LHPGVTNDDIRELFSEIGELKR-YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLL 164
LH V+ +D++ +FS+ GE+ I +D++GR +GSA + YA A A+ +++ +
Sbjct: 99 LHYEVSAEDLKSIFSQAGEIVTGPTIVYDRSGRSTGSAWMEYANVQQAKIAINKFDGAMT 158
Query: 165 DGKPMKI 171
G+ + I
Sbjct: 159 KGQTISI 165
>gi|340931863|gb|EGS19396.1| hypothetical protein CTHT_0048550 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 614
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSD 151
+ G E ++V NL +N+D+ ELF IG++++ I ++ +GR G+ V +
Sbjct: 506 VPGTEKCDTIFVRNLPWSTSNEDLVELFQTIGKVEQAEIQYEPSGRSRGTGVVRFDNADT 565
Query: 152 AFAALKRYNNVLLDGKPMKI 171
A A+ ++ G+P+ I
Sbjct: 566 AETAIAKFQGYQYGGRPLNI 585
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFA 154
G +LYVSNL + D+++LF + G + R +H +GRP GS VV+ DA
Sbjct: 359 GRQLYVSNLPFNIGWQDLKDLFRQAARQGAIIRADVHMGPDGRPKGSGIVVFESPDDARN 418
Query: 155 ALKRYNNVLLDGKPMKI 171
A++++N +G+ +++
Sbjct: 419 AIQQFNGYEWNGRIIEV 435
>gi|396462506|ref|XP_003835864.1| hypothetical protein LEMA_P052050.1 [Leptosphaeria maculans JN3]
gi|312212416|emb|CBX92499.1| hypothetical protein LEMA_P052050.1 [Leptosphaeria maculans JN3]
Length = 254
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
TK+ VSNL V +++ F +G K+ + + NGR GSA +++ + A A
Sbjct: 70 TKIMVSNLPLDVEQGQLQDYFINAVGVGRPKKILLQYGPNGRSLGSATIIFNKHEQASKA 129
Query: 156 LKRYNNVLLDGKPMKIEVVGTNAEIP 181
+ V +DG+P+++E++ + ++P
Sbjct: 130 TAALDGVKIDGRPVRVEMLVSADKLP 155
>gi|156088367|ref|XP_001611590.1| RNA recognition motif domain containing protein [Babesia bovis]
gi|154798844|gb|EDO08022.1| RNA recognition motif domain containing protein [Babesia bovis]
Length = 643
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAI-HFDKNGRPSGSAEVVYARRSDAFAAL 156
GT++ + NL T + +RELFSE GE+ R I F++NG+ G + + A A+
Sbjct: 476 GTEVCIRNLSYNTTEETMRELFSECGEVIRCVIPKFEENGKSMGRCFIGFTSEEAAARAV 535
Query: 157 KRYNNVLLDGKPMKIE 172
+ Y+N +DG+ + I+
Sbjct: 536 E-YDNTEIDGRTVSIQ 550
>gi|241948801|ref|XP_002417123.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223640461|emb|CAX44713.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 224
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG-RPSGSAEVVYARRSDAFAALKRY 159
+YV NL T + I ELFS+ G + R + D+N P G V+Y + A+K
Sbjct: 42 VYVGNLSHFTTEEQIHELFSKCGAIDRIIMGLDRNKLTPCGFCFVIYRSEQGSLNAMKFL 101
Query: 160 NNVLLDGKPMKIEV 173
+ +LD + + I++
Sbjct: 102 QSTILDSQSISIDL 115
>gi|440640342|gb|ELR10261.1| hypothetical protein GMDG_04647 [Geomyces destructans 20631-21]
Length = 584
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+YV NL +N+D+ ELF+ IG++++ I ++ NGR G+ V + +A A+ +++
Sbjct: 485 IYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRFDTVENADTAISKFS 544
Query: 161 NVLLDGKPMKIEVV 174
G+P+ + V
Sbjct: 545 GYQYGGRPLGLSFV 558
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEI---GELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF + G + R +H +GRP GS V + +DA A+
Sbjct: 325 QIYVNNLPYTVGWQDLKDLFRQAAREGAVIRADVHIGPDGRPKGSGIVAFESPNDARNAI 384
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+P+++
Sbjct: 385 QQFNGYDWQGRPLEV 399
>gi|389637404|ref|XP_003716339.1| RNP domain-containing protein [Magnaporthe oryzae 70-15]
gi|351642158|gb|EHA50020.1| RNP domain-containing protein [Magnaporthe oryzae 70-15]
Length = 428
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G + +YV NL +N+D+ ELF+ IG++++ I ++ +GR GS V + A
Sbjct: 322 AGADRSETIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPSGRSRGSGVVRFDNAETA 381
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
++ ++ G+P+ + V
Sbjct: 382 ETSIAKFQGYQYGGRPLNLSFV 403
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARR 149
SG G +++V+NL V ++++LF + +G + R IH + RP GS V+Y
Sbjct: 158 SGPPQGRQVFVNNLPYNVDWREMKDLFRQAARVGGVHRADIHMTPDNRPKGSGIVIYDHP 217
Query: 150 SDAFAALKRYNNVLLDGKPMKI 171
DA A++++N G+ +++
Sbjct: 218 DDANNAIQQFNGYEWYGRTIEV 239
>gi|171912058|ref|ZP_02927528.1| RNA-binding region RNP-1 [Verrucomicrobium spinosum DSM 4136]
Length = 150
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAA 155
+ TK+YV NL T D+RELFS+ G + ++ D++ GRP G A V + AA
Sbjct: 1 MNTKMYVGNLAWSATEQDVRELFSQYGAVTEVSLPTDRDTGRPRGFAFVAMDTKEAMDAA 60
Query: 156 LKRYNNVLLDGKPMKI 171
+K N + G+ + +
Sbjct: 61 IKGLNGLEWMGRALTV 76
>gi|225680290|gb|EEH18574.1| hypothetical protein PABG_07634 [Paracoccidioides brasiliensis
Pb03]
Length = 281
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 44/172 (25%)
Query: 115 IRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
I E F + G +K+ + +++NG G A + + R A A K N +L+D +P+KIEV
Sbjct: 121 IAEYFHKSAGPVKKVMLTYNQNGTSRGIAAITFVRPDTAAKAAKELNGLLIDKRPIKIEV 180
Query: 174 VGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGSQGRRGGLRRSSQG 233
V L A +R P + R +Q
Sbjct: 181 V-------LDA------------------------------SRAPTVPAVKLLTERVAQP 203
Query: 234 RGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELDNYH 285
+ + + + G RGR R RGR G+ P K+ +LD E+++Y
Sbjct: 204 KPQPKPVSATK---GSAASKRGRPR-RGRNAGRPKP--KTVAELDAEMEDYF 249
>gi|390598926|gb|EIN08323.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 299
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRS 150
+G G +LYV NL D+++LF G + R I+ +GRP GS V++
Sbjct: 21 AFAGNNPGNQLYVGNLPYQAGWQDLKDLFRSAGNIIRADINIAPDGRPKGSGTVIFETAK 80
Query: 151 DAFAALKRYNNVLLDGKPMKI 171
DA A+ YN G+ +++
Sbjct: 81 DAQNAINMYNGFDWYGRILEV 101
>gi|238879057|gb|EEQ42695.1| hypothetical protein CAWG_00916 [Candida albicans WO-1]
Length = 224
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG-RPSGSAEVVYARRSDAFAALKRY 159
+YV NL T + I ELFS+ G + R + D+N P G V+Y + A+K
Sbjct: 42 VYVGNLSHFTTEEQIHELFSKCGAIDRIIMGLDRNKLTPCGFCFVIYRTEQGSLNAMKFL 101
Query: 160 NNVLLDGKPMKIEV 173
+ +LD + + I++
Sbjct: 102 QSTILDSQSISIDL 115
>gi|68484939|ref|XP_713608.1| hypothetical protein CaO19.8383 [Candida albicans SC5314]
gi|68485014|ref|XP_713573.1| hypothetical protein CaO19.763 [Candida albicans SC5314]
gi|46435078|gb|EAK94468.1| hypothetical protein CaO19.763 [Candida albicans SC5314]
gi|46435114|gb|EAK94503.1| hypothetical protein CaO19.8383 [Candida albicans SC5314]
Length = 224
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG-RPSGSAEVVYARRSDAFAALKRY 159
+YV NL T + I ELFS+ G + R + D+N P G V+Y + A+K
Sbjct: 42 VYVGNLSHFTTEEQIHELFSKCGAIDRIIMGLDRNKLTPCGFCFVIYRTEQGSLNAMKFL 101
Query: 160 NNVLLDGKPMKIEV 173
+ +LD + + I++
Sbjct: 102 QSTILDSQSISIDL 115
>gi|242790897|ref|XP_002481649.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
gi|218718237|gb|EED17657.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
Length = 478
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+YV NL N+D+ +LF+ IG+++R I ++ NGR G+ V + A A+ ++
Sbjct: 378 IYVRNLPWSTCNEDLVDLFTTIGKVERAEIQYEGNGRSRGTGVVEFDSPETAETAISKFT 437
Query: 161 NVLLDGKPMKIEVV 174
G+P+ I V
Sbjct: 438 GYQYGGRPLGITFV 451
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++Y+SNL V D+++LF ++ G + R + D +GRP GS VV+ DA A+
Sbjct: 209 QIYISNLPFNVGWQDLKDLFRQAAQQGAVIRADVLSDPSGRPKGSGIVVFESPEDARVAI 268
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 269 QQFNGYDWQGRILEV 283
>gi|390598948|gb|EIN08345.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 238
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYA-IHFDKNGRPSGSAEVVYARRSDAFAAL 156
++L VS LH VT D+ F +G L R I +D++GR +G A V Y +A A
Sbjct: 53 NSRLVVSGLHYEVTAKDLINAFGHMGTLVREPLIKYDRSGRSTGVAIVTYETADEAALAK 112
Query: 157 KRYNNVLLDGKPMKI 171
+++ V ++ KPM++
Sbjct: 113 AKFDGVRINDKPMRV 127
>gi|291233817|ref|XP_002736851.1| PREDICTED: heterogeneous nuclear ribonucleoprotein M-like
[Saccoglossus kowalevskii]
Length = 615
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 87 LRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVY 146
L+ G+ EV ++VSNL VT ++++F G + R I D+ G+ G A + +
Sbjct: 264 LQQLGLQRHEVSNTIFVSNLDYKVTWQKLKDIFRMAGNVVRADIKTDREGKSRGMATIQF 323
Query: 147 ARRSDAFAALKRYNNVLLDGKPMKI 171
+A AL +N L +PM++
Sbjct: 324 DTPMEAVQALSMFNGQNLFERPMRL 348
>gi|255730519|ref|XP_002550184.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132141|gb|EER31699.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 206
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG-RPSGSAEVVYARRSDAFAALKRY 159
+YV NL T + I ELFS+ G + R + D+N P G V+Y + A+K
Sbjct: 42 VYVGNLSHFTTEEQIHELFSKCGAIDRIIMGLDRNKLTPCGFCFVIYRTEQGSLNAMKFL 101
Query: 160 NNVLLDGKPMKIEV 173
+ +LD + + I++
Sbjct: 102 QSTVLDSQDITIDL 115
>gi|403418000|emb|CCM04700.1| predicted protein [Fibroporia radiculosa]
Length = 372
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L+++ LH T+ D+R F G ++R I DK GR G A +V+ R D AA K +
Sbjct: 120 LFIARLHKSATDSDLRREFEGFGSIERVRIVRDKRGRSRGYAFIVFERERDMKAAYKESD 179
Query: 161 NVLLDGKPMKIEV 173
+ + GK + ++V
Sbjct: 180 RLHIMGKRVLVDV 192
>gi|242050110|ref|XP_002462799.1| hypothetical protein SORBIDRAFT_02g032170 [Sorghum bicolor]
gi|241926176|gb|EER99320.1| hypothetical protein SORBIDRAFT_02g032170 [Sorghum bicolor]
Length = 392
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELK--------RYAIHFDK-NGRPSGSAEVVYARRSD 151
+YV NL PG D + E F IG LK + I+ DK P G A V Y
Sbjct: 14 VYVCNLPPGTDEDMLAEYFGTIGLLKKDKRTGRPKIWIYRDKVTNEPKGDATVTYEDPHA 73
Query: 152 AFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVN 192
A AA++ +NN G +++ + + ++ +A N T +N
Sbjct: 74 ASAAVEWFNNKDFHGSTIQVHIAESKSK---EAFDNPTSLN 111
>gi|357121679|ref|XP_003562545.1| PREDICTED: uncharacterized protein LOC100833358 [Brachypodium
distachyon]
Length = 389
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELK--------RYAIHFDK-NGRPSGSAEVVYARRSD 151
+YV NL PG + E F IG LK + I+ DK P G A V Y
Sbjct: 14 IYVCNLPPGTDETMLAEYFGTIGLLKKDKRTGHPKIWIYRDKVTNEPKGDATVTYEDPHA 73
Query: 152 AFAALKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVT 189
A AA++ +NN G +++ + + ++ + N++
Sbjct: 74 ASAAVEWFNNKDFHGSIIQVHIAESKSKDTFDSSTNLS 111
>gi|395324355|gb|EJF56797.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 382
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G +LYV NL D+++LF G + R I+ +GRP GS V++ DA A+
Sbjct: 107 GNQLYVGNLPYQAGWQDLKDLFRSAGNIIRADINIGADGRPKGSGTVIFETAKDAQQAIS 166
Query: 158 RYNNVLLDGKPMKI 171
YN G+ +++
Sbjct: 167 MYNGFDWYGRTLEV 180
>gi|302675531|ref|XP_003027449.1| hypothetical protein SCHCODRAFT_86032 [Schizophyllum commune H4-8]
gi|300101136|gb|EFI92546.1| hypothetical protein SCHCODRAFT_86032 [Schizophyllum commune H4-8]
Length = 559
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G +LYV NL D+++LF G + R I+ +GRP GS VV+ DA A++
Sbjct: 301 GNQLYVGNLPYQAGWQDLKDLFRTAGSIVRADINIGMDGRPKGSGTVVFETAKDAQQAIQ 360
Query: 158 RYNNVLLDGKPMKI 171
YN G+ +++
Sbjct: 361 MYNGFDWYGRVLEV 374
>gi|24583292|ref|NP_477001.2| repressor splicing factor 1, isoform A [Drosophila melanogaster]
gi|442627179|ref|NP_001260318.1| repressor splicing factor 1, isoform B [Drosophila melanogaster]
gi|195339711|ref|XP_002036460.1| GM11879 [Drosophila sechellia]
gi|195578095|ref|XP_002078901.1| GD22286 [Drosophila simulans]
gi|7297638|gb|AAF52890.1| repressor splicing factor 1, isoform A [Drosophila melanogaster]
gi|17945878|gb|AAL48985.1| RE39606p [Drosophila melanogaster]
gi|194130340|gb|EDW52383.1| GM11879 [Drosophila sechellia]
gi|194190910|gb|EDX04486.1| GD22286 [Drosophila simulans]
gi|220948492|gb|ACL86789.1| Rsf1-PA [synthetic construct]
gi|220957768|gb|ACL91427.1| Rsf1-PA [synthetic construct]
gi|440213636|gb|AGB92853.1| repressor splicing factor 1, isoform B [Drosophila melanogaster]
Length = 200
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GT++YV NL V DD+ F++ G+L I F+ P G A V + R DA A
Sbjct: 9 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFN----PPGFAFVEFEHRDDAEKACD 64
Query: 158 RYNNVLLDGKPMKIEV 173
N L G +++E+
Sbjct: 65 ILNGSELLGSQLRVEI 80
>gi|3929381|sp|Q24491.1|RX21_DROME RecName: Full=RNA-binding protein Rsf1; AltName: Full=RNA-binding
protein Rox21
gi|606749|gb|AAA73521.1| RNA binding protein [Drosophila melanogaster]
Length = 197
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GT++YV NL V DD+ F++ G+L I F+ P G A V + R DA A
Sbjct: 6 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFN----PPGFAFVEFEHRDDAEKACD 61
Query: 158 RYNNVLLDGKPMKIEV 173
N L G +++E+
Sbjct: 62 ILNGSELLGSQLRVEI 77
>gi|194859678|ref|XP_001969428.1| GG23961 [Drosophila erecta]
gi|195473557|ref|XP_002089059.1| GE26241 [Drosophila yakuba]
gi|190661295|gb|EDV58487.1| GG23961 [Drosophila erecta]
gi|194175160|gb|EDW88771.1| GE26241 [Drosophila yakuba]
Length = 200
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GT++YV NL V DD+ F++ G+L I F+ P G A V + R DA A
Sbjct: 9 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFN----PPGFAFVEFEHRDDAEKACD 64
Query: 158 RYNNVLLDGKPMKIEV 173
N L G +++E+
Sbjct: 65 ILNGSELLGSQLRVEI 80
>gi|116180668|ref|XP_001220183.1| hypothetical protein CHGG_00962 [Chaetomium globosum CBS 148.51]
gi|88185259|gb|EAQ92727.1| hypothetical protein CHGG_00962 [Chaetomium globosum CBS 148.51]
Length = 312
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 28/129 (21%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
W HD FED R + + + P +T ++ LFS IG + + +D+ GR
Sbjct: 51 WVHDKFEDHDR-----------QPTLRSQAPLLTR-PVKGLFSRIGPVVTLDMKYDRAGR 98
Query: 138 PSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV----------------VGTNAEIP 181
G+A V Y DA A++ Y+ G+P+++ + V T A P
Sbjct: 99 SEGTAFVTYESPRDAAQAIQEYDGANAAGQPIRLTLMPSGPSMSRRGNPFDSVVTGAGRP 158
Query: 182 LQARVNVTG 190
L R+ V G
Sbjct: 159 LAERITVPG 167
>gi|426199137|gb|EKV49062.1| hypothetical protein AGABI2DRAFT_149358 [Agaricus bisporus var.
bisporus H97]
Length = 406
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L++S LH T D+R F G ++R I DK R G A +VY R D AA K +
Sbjct: 118 LFISRLHKSATETDLRREFEGYGTIERVRIVRDKKNRSRGYAFIVYERERDMKAAYKESD 177
Query: 161 NVLLDGKPMKIEV 173
+ + GK + ++V
Sbjct: 178 GLHIMGKKILVDV 190
>gi|409077798|gb|EKM78163.1| hypothetical protein AGABI1DRAFT_101420 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 406
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L++S LH T D+R F G ++R I DK R G A +VY R D AA K +
Sbjct: 118 LFISRLHKSATETDLRREFEGYGTIERVRIVRDKKNRSRGYAFIVYERERDMKAAYKESD 177
Query: 161 NVLLDGKPMKIEV 173
+ + GK + ++V
Sbjct: 178 GLHIMGKKILVDV 190
>gi|392588971|gb|EIW78302.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 399
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G +LYV NL D+++LF G + R I+ +GRP GS VV+ DA A+
Sbjct: 107 GNQLYVGNLPYQAGWQDLKDLFRTAGNIIRADINIGADGRPKGSGTVVFETPKDANQAIS 166
Query: 158 RYNNVLLDGKPMKI 171
YN G+ +++
Sbjct: 167 MYNGFDWYGRILEV 180
>gi|448510154|ref|XP_003866291.1| hypothetical protein CORT_0A04630 [Candida orthopsilosis Co 90-125]
gi|380350629|emb|CCG20851.1| hypothetical protein CORT_0A04630 [Candida orthopsilosis Co 90-125]
Length = 254
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 26/200 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ ++ SLDDII +K + R RGRG GP S S R R P S +
Sbjct: 1 MSNILEKSLDDIIGEKKPERKFTPTSR----RGRGGGPISS-SRSRFHRQHRSPPYSRRQ 55
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG-TKLYVSNLHPGVTNDDIRELF 119
P Y I + P + D L A G L + N+HP + DD+ +LF
Sbjct: 56 PDVY-IPRGSPAIETTPSSSSIPPDVLHMAN------GRPTLRLKNIHPELNGDDLNKLF 108
Query: 120 SEIGELKRYAIHFDKNGRPSGSAEVVYAR---RSDAFAALKRYNNVLLDGKPMKIEVVGT 176
S I ++ I FD+ R A + + R RS++ A+++Y DGK +++
Sbjct: 109 STINDVD--FIKFDE--RNDTIAYICFQRDCERSNS-EAIEKY-----DGKKAMGKILIV 158
Query: 177 NAEIPLQARVNVTGVNGRRK 196
+ L R+ + RR+
Sbjct: 159 ENTVSLADRIRIAPRPARRE 178
>gi|388858327|emb|CCF48115.1| related to glycine-rich RNA-binding protein [Ustilago hordei]
Length = 193
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAA 155
+ K+YV NL T+D + FS G+L Y + D + GR G V +A + +A AA
Sbjct: 1 MAAKVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAA 60
Query: 156 LKRYNNVLLDGKPMKIEVVGT 176
+ N LDG+ +++ + +
Sbjct: 61 IAALNEQELDGRRIRVNMANS 81
>gi|157872658|ref|XP_001684864.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|68127934|emb|CAJ06567.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 216
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
T ++V +L T+ D+R F+ G + R + D+ G P G+A V + A AA+ +
Sbjct: 76 TSIFVGDLDLRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQAHAAILK 135
Query: 159 YNNVLLDGKPMKI 171
+ L GKP+K+
Sbjct: 136 -DGQSLHGKPLKV 147
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV N+H +T D++ +F GEL+ + + GR G V + A AL++
Sbjct: 278 RLYVGNIHFSITEGDLQNVFEPFGELEFVQLQKEDQGRSRGYGFVQFRDPHQAREALEKM 337
Query: 160 NNVLLDGKPMKI 171
N L G+P+++
Sbjct: 338 NGFDLAGRPIRV 349
>gi|298714936|emb|CBJ27692.1| RNA recognition motif-containing protein [Ectocarpus siliculosus]
Length = 346
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 33 GRGRGPSGSVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGI 92
GRGR SV G R A R + T NF D ED + A
Sbjct: 157 GRGRIIECSVCGNRWFQTAER---------------ALTLTDNF-LMKDWTEDRVAATAE 200
Query: 93 SGIEV-GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSD 151
+ + G L+V N+ V+ D+ +F GE+K A+ D+NG G V D
Sbjct: 201 AAKKFAGFNLFVGNIPFSVSEKDLGAIFGNFGEVKSTALVTDENGDSRGYGSVKMGTEED 260
Query: 152 AFAALKRYNNVLLDGKPMKIEVVGTNA 178
A+K N + + G+ M ++V +N+
Sbjct: 261 GRKAIKALNGIEIQGRSMLVKVGASNS 287
>gi|17539984|ref|NP_501594.1| Protein ALY-2 [Caenorhabditis elegans]
gi|3876277|emb|CAB05180.1| Protein ALY-2 [Caenorhabditis elegans]
Length = 227
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
++ +SNL V + D++ELF L + +++F++NG +G+ ++ ++ DA +++
Sbjct: 80 VRINISNLAETVISSDLQELFGAFN-LHKVSVNFNENGGAAGTGDITL-KKYDADRLIQK 137
Query: 159 YNNVLLDGKPMKIEVV 174
+ V LDGK M V+
Sbjct: 138 FAGVALDGKVMHFAVI 153
>gi|310796361|gb|EFQ31822.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 441
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
+G + +YV NL +N+D+ ELF+ IG++++ I ++ +GR G+ V + A
Sbjct: 334 AGTDRSETIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRFDSAETA 393
Query: 153 FAALKRYNNVLLDGKPMKIEVV 174
A+ ++ G+P+ + V
Sbjct: 394 ETAIAKFQGYQYGGRPLGLSFV 415
>gi|195053219|ref|XP_001993524.1| GH13017 [Drosophila grimshawi]
gi|193900583|gb|EDV99449.1| GH13017 [Drosophila grimshawi]
Length = 201
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GT++YV NL V DD+ F++ G+L I F+ P G A V + R DA A
Sbjct: 6 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFN----PPGFAFVEFEHRDDAEKACD 61
Query: 158 RYNNVLLDGKPMKIEV 173
N L G +++E+
Sbjct: 62 ILNGSELLGSQLRVEI 77
>gi|440471739|gb|ELQ40692.1| hypothetical protein OOU_Y34scaffold00378g4 [Magnaporthe oryzae
Y34]
Length = 522
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 40/74 (54%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+ + L VT D +R++F + GE++ + ++ G G+A ++Y + DA +A+ +
Sbjct: 292 IVIERLTKNVTEDHLRDIFGQYGEIRDLDLPINRQGTNRGTAYILYVQEPDAESAIAHMH 351
Query: 161 NVLLDGKPMKIEVV 174
+DG + + +V
Sbjct: 352 EGQIDGATVNVSIV 365
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAA 155
+ TK+YV NL T+D +RE FSE G++ + D + GR G V ++ +A AA
Sbjct: 1 MSTKVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAA 60
Query: 156 LKRYNNVLLDGKPMKIEV 173
+ + LDG+ +K+ +
Sbjct: 61 INSLHEQDLDGRRIKVNL 78
>gi|398019614|ref|XP_003862971.1| RNA-binding protein, putative [Leishmania donovani]
gi|322501202|emb|CBZ36281.1| RNA-binding protein, putative [Leishmania donovani]
Length = 214
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
T ++V +L T+ D+R F+ G + R + D+ G P G+A V + A AA+ +
Sbjct: 76 TSIFVGDLDLRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQAHAAILK 135
Query: 159 YNNVLLDGKPMKI 171
+ L GKP+K+
Sbjct: 136 -DGQSLHGKPLKV 147
>gi|146093988|ref|XP_001467105.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134071469|emb|CAM70158.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 216
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
T ++V +L T+ D+R F+ G + R + D+ G P G+A V + A AA+ +
Sbjct: 76 TSIFVGDLDLRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQAHAAILK 135
Query: 159 YNNVLLDGKPMKI 171
+ L GKP+K+
Sbjct: 136 -DGQSLHGKPLKV 147
>gi|401425835|ref|XP_003877402.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493647|emb|CBZ28937.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 216
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKR 158
T ++V +L T+ D+R F+ G + R + D+ G P G+A V + A AA+ +
Sbjct: 76 TSIFVGDLDLRTTDADLRVFFASCGAITRVTVLKDRQGNPKGTAYVEFETEGQAHAAILK 135
Query: 159 YNNVLLDGKPMKI 171
+ L GKP+K+
Sbjct: 136 -DGQSLHGKPLKV 147
>gi|401402528|ref|XP_003881272.1| hypothetical protein NCLIV_043070 [Neospora caninum Liverpool]
gi|325115684|emb|CBZ51239.1| hypothetical protein NCLIV_043070 [Neospora caninum Liverpool]
Length = 244
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 34/195 (17%)
Query: 3 THVDMSLDDIIKSRKKS------------------------ERERGQGRARRGRGRGRGP 38
+ +DMSLDDI+ + + + + G G A RGRGRG
Sbjct: 4 SMLDMSLDDIVAAHRDAAGDAPGRGGRGRGGGFGGRRGSFRGAQAGGGFASSFRGRGRGF 63
Query: 39 SGSVSGGRMTGAAR-RGPLSNARP-SSYTIAKSFRRTRNFPWQHDLFED-----SLRAAG 91
S G +R P S R S Y+ S R R W D + R +G
Sbjct: 64 SSWRRGDEDWEDSRSHAPFSRRRAFSPYSTPYSDRDGR---WGPSRRGDRRGAPAFRESG 120
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSD 151
E + VSNL V +D++ELF+ +GE+ + + +D+ R G+ ++ SD
Sbjct: 121 GRTREPTAVVRVSNLDYSVLEEDLKELFAAVGEVVKVWLEYDRTDRSKGTGGCIFRHLSD 180
Query: 152 AFAALKRYNNVLLDG 166
A A++ + ++G
Sbjct: 181 AKRAIELFEGRRIEG 195
>gi|170108674|ref|XP_001885545.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164639421|gb|EDR03692.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 568
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G +LYV NL D+++LF G + R I+ +GRP GS VV+ DA A+
Sbjct: 285 GNQLYVGNLPYQAGWQDLKDLFRTAGNIIRADINIGADGRPKGSGTVVFETPKDAQQAIS 344
Query: 158 RYNNVLLDGKPMKI 171
Y+ G+ +++
Sbjct: 345 MYHGFDWYGRTLEV 358
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E ++ V NL N+D+ ELF G+++ I FD R G V +A+ +A A
Sbjct: 467 EPSQQIMVRNLPWSTANEDLVELFETTGQVELAEILFDGT-RSKGCGVVQFAQVPEAETA 525
Query: 156 LKRYNNVLLDGKPMKI 171
+ ++ + + G+P+ +
Sbjct: 526 IAKFQHYMYGGRPLDV 541
>gi|336383939|gb|EGO25088.1| U1 snRNP 70K protein [Serpula lacrymans var. lacrymans S7.9]
Length = 377
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L++S LH G + ++R F G ++R I D GR G A +VY R D AA K +
Sbjct: 119 LFISRLHKGASEMELRRDFESFGTIERVRIVRDSKGRSRGYAFIVYERERDMKAAYKESD 178
Query: 161 NVLLDGKPMKIEV 173
+ ++GK + ++V
Sbjct: 179 GLHINGKRILVDV 191
>gi|162454265|ref|YP_001616632.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161164847|emb|CAN96152.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 138
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAA 155
+G +LYV NL T + + F+ GE++ A+ D + G+P G A V A +A
Sbjct: 1 MGNRLYVGNLSFSTTRETLESAFAAAGEVREIAMPTDRETGQPRGFAFVTMGSAQAANSA 60
Query: 156 LKRYNNVLLDGKPMKI 171
+ + N +LDG+ +K+
Sbjct: 61 ISQLNGAVLDGRALKV 76
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRSDAFAALKRY 159
L+V NL + + F+++ +++ I D+ +GRP G A V ++ DA AA +
Sbjct: 395 LFVGNLSFSANEESVSAFFNKVAKVQSLRIPTDQESGRPKGFAYVTFSSVDDAKAAFEAL 454
Query: 160 NNVLLDGKPMKIEV 173
N LDG+P++++
Sbjct: 455 NGSDLDGRPVRLDF 468
>gi|344304827|gb|EGW35059.1| hypothetical protein SPAPADRAFT_131749 [Spathaspora passalidarum
NRRL Y-27907]
Length = 209
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG-RPSGSAEVVYARRSDAFAALKRY 159
+YV NL T + I ELFS+ G + R + D+N P G V+Y + A+K
Sbjct: 45 VYVGNLSHFTTEEQIHELFSKCGAIDRIIMGLDRNKLTPCGFCFVIYRTEQGSLNAMKFL 104
Query: 160 NNVLLDGKPMKIEV 173
+LD + + I++
Sbjct: 105 QATILDSQSISIDL 118
>gi|401888880|gb|EJT52827.1| hypothetical protein A1Q1_01322 [Trichosporon asahii var. asahii
CBS 2479]
Length = 273
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 116/302 (38%), Gaps = 61/302 (20%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D LDD+I RK P S G R +R S
Sbjct: 3 IDRPLDDLIPKRKPK------------------PRSSTGRGGGGAGVERSERRKSRGSDA 44
Query: 65 TIAKSFRRTRNFPWQHDLFE-----DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
A+ R+ W HD FE SL AAG + ++ VS +H VT ++++ +
Sbjct: 45 PYARPPPRSTEDKWVHDAFEGPGRKPSLGAAGHMPVTSSPRIEVSGVHYEVTPEELKRIR 104
Query: 120 SEIGELKRY-AIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP---------- 168
+ + R +D+ GR +G V Y+ + A +AL +++ ++ P
Sbjct: 105 AGGDDHPRPRDPEYDRAGRSTGVCIVEYSSPAQAKSALNQFDGAMMKVPPGGSRLVFCQP 164
Query: 169 ---MKIEVVGTNAEIPLQARVNVTGVNGRRKR-TVVMTSGSGNAGGA--AAINRGPGSQG 222
+ +++ + E Q + + + R R S GN+G + A + + G
Sbjct: 165 LRRISPQILASFYE---QQTITIKLIAPPRPRGDKKKKSVDGNSGQSLLARLGQSSGQSK 221
Query: 223 RRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKSADDLDKELD 282
+R R R RG GRG + G+G+GK+ P SA DLD EL
Sbjct: 222 QRDAPRNDRSDRSRG---GRGNAQT-------------GQGRGKRAPA--SAADLDAELA 263
Query: 283 NY 284
+
Sbjct: 264 GF 265
>gi|397626735|gb|EJK68222.1| hypothetical protein THAOC_10620 [Thalassiosira oceanica]
Length = 486
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E K+Y+ L T D++RE F+E GE+K + +GR SG+A + ++ S + +A
Sbjct: 251 EANCKVYIRGLPWRATEDEVREFFAECGEIKSVDMPLQDDGRSSGTAIIEFSDPSGSASA 310
Query: 156 LK 157
L+
Sbjct: 311 LE 312
>gi|353238395|emb|CCA70343.1| hypothetical protein PIIN_04282 [Piriformospora indica DSM 11827]
Length = 301
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 7/164 (4%)
Query: 44 GGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDS--LRAAGISGIEVGTKL 101
G RMTG R S A SS + ++F P DS L G S + GT +
Sbjct: 71 GARMTGDVGRQITSGASGSSRLVNRAFAGVLGKPEPKGATSDSGGLSIKGASTL-AGTGV 129
Query: 102 YVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNN 161
V L PG T +D+ E+FS G++ + + + P+ + + A A+ R++
Sbjct: 130 EVDGLAPGTTAEDVAEIFSSCGKIVEHRL-LTRPDSPTVRVFLHFETAQGAQTAVARFDK 188
Query: 162 VLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGS 205
DG+ + + VV + L +R+ G + K+ V + + S
Sbjct: 189 QTADGRTLNVFVVSAGS---LASRMGFQGRSAPPKKNVDLLADS 229
>gi|354543799|emb|CCE40521.1| hypothetical protein CPAR2_105570 [Candida parapsilosis]
Length = 216
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG-RPSGSAEVVYARRSDAFAALKRY 159
+YV NL T + I ELF + G + + + D+N P G V+Y A A+K
Sbjct: 42 VYVGNLSHFTTEEQIHELFMKCGAIDKIIMGLDRNKLTPCGFCFVIYRTEQGALNAMKYL 101
Query: 160 NNVLLDGKPMKIEV 173
+ +LD + + I++
Sbjct: 102 QSTILDSQSISIDL 115
>gi|336370661|gb|EGN99001.1| hypothetical protein SERLA73DRAFT_168572 [Serpula lacrymans var.
lacrymans S7.3]
Length = 379
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L++S LH G + ++R F G ++R I D GR G A +VY R D AA K +
Sbjct: 119 LFISRLHKGASEMELRRDFESFGTIERVRIVRDSKGRSRGYAFIVYERERDMKAAYKESD 178
Query: 161 NVLLDGKPMKIEV 173
+ ++GK + ++V
Sbjct: 179 GLHINGKRILVDV 191
>gi|301093774|ref|XP_002997732.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109981|gb|EEY68033.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 226
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAAL 156
G LYV+NL V D+++LFS+ G +++ + D + S G V + DA A+
Sbjct: 64 GNNLYVANLATRVGQQDLQDLFSKFGRVEKCEVIVDPVTKESRGFGFVTFEDVRDAEDAV 123
Query: 157 KRYNNVLLDGKPMKIE 172
K NN + G+ M++E
Sbjct: 124 KELNNQEVQGRKMRVE 139
>gi|332249061|ref|XP_003273679.1| PREDICTED: RNA-binding protein 39 [Nomascus leucogenys]
Length = 432
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAALKR 158
+LYV +LH +T D +R +F G ++ + D + GR G + ++ A AL++
Sbjct: 159 RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQ 218
Query: 159 YNNVLLDGKPMKI 171
N L G+PMK+
Sbjct: 219 LNGFELAGRPMKV 231
>gi|195450476|ref|XP_002072511.1| GK12439 [Drosophila willistoni]
gi|194168596|gb|EDW83497.1| GK12439 [Drosophila willistoni]
Length = 192
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GT++YV NL V DD+ F++ G+L I F+ P G A V + R DA A
Sbjct: 6 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFN----PPGFAFVEFEHRDDAEKACD 61
Query: 158 RYNNVLLDGKPMKIEV 173
N L G +++E+
Sbjct: 62 ILNGSELLGSQLRVEI 77
>gi|86196251|gb|EAQ70889.1| hypothetical protein MGCH7_ch7g296 [Magnaporthe oryzae 70-15]
Length = 375
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 40/74 (54%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+ + L VT D +R++F + GE++ + ++ G G+A ++Y + DA +A+ +
Sbjct: 145 IVIERLTKNVTEDHLRDIFGQYGEIRDLDLPINRQGTNRGTAYILYVQEPDAESAIAHMH 204
Query: 161 NVLLDGKPMKIEVV 174
+DG + + +V
Sbjct: 205 EGQIDGATVNVSIV 218
>gi|226504406|ref|NP_001151698.1| RNA binding protein [Zea mays]
gi|195649091|gb|ACG44013.1| RNA binding protein [Zea mays]
Length = 267
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALK 157
+ +YVSNL +TN D+ LFS G + R + D+ R S G A V++ R DA AA
Sbjct: 52 STVYVSNLDFALTNSDLHLLFSRFGRVARVTVLKDRESRRSRGVAFVLFVSREDAAAAAA 111
Query: 158 RYNNVLLDGKPMKIEVVGTN 177
+ +L+G+ + + N
Sbjct: 112 EMHGKVLNGRTLSASIAADN 131
>gi|242050084|ref|XP_002462786.1| hypothetical protein SORBIDRAFT_02g031980 [Sorghum bicolor]
gi|241926163|gb|EER99307.1| hypothetical protein SORBIDRAFT_02g031980 [Sorghum bicolor]
Length = 270
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALK 157
+ +YVSNL +TN D+ LFS G + R + D+ R S G A V++ R DA AA
Sbjct: 58 STVYVSNLDFALTNSDLHLLFSRFGRVARVTVLKDRESRRSRGVAFVLFVSREDAAAAAA 117
Query: 158 RYNNVLLDGKPMKIEVVGTN 177
+ +L+G+ + + N
Sbjct: 118 EMHGKVLNGRTLSASIAADN 137
>gi|414886630|tpg|DAA62644.1| TPA: RNA binding protein [Zea mays]
Length = 261
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALK 157
+ +YVSNL +TN D+ LFS G + R + D+ R S G A V++ R DA AA
Sbjct: 52 STVYVSNLDFALTNSDLHLLFSRFGRVARVTVLKDRESRRSRGVAFVLFVSREDAAAAAA 111
Query: 158 RYNNVLLDGKPMKIEVVGTN 177
+ +L+G+ + + N
Sbjct: 112 EMHGKVLNGRTLSASIAADN 131
>gi|195387425|ref|XP_002052396.1| GJ17527 [Drosophila virilis]
gi|194148853|gb|EDW64551.1| GJ17527 [Drosophila virilis]
Length = 198
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GT++YV NL V DD+ F++ G+L I F+ P G A V + R DA A
Sbjct: 6 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFN----PPGFAFVEFEHRDDAEKACD 61
Query: 158 RYNNVLLDGKPMKIEV 173
N L G +++E+
Sbjct: 62 ILNGSELLGSQLRVEI 77
>gi|289740733|gb|ADD19114.1| repressor splicing factor 1 [Glossina morsitans morsitans]
Length = 186
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GT++YV NL + DD+ F++ G+L I F+ P G A V + R DA A
Sbjct: 6 GTRVYVGNLTDKIKKDDLEGEFTKYGKLNSVWIAFN----PPGFAFVEFEHRDDAEKACD 61
Query: 158 RYNNVLLDGKPMKIEV 173
N L G +++E+
Sbjct: 62 VLNGTELLGSQLRVEI 77
>gi|194761708|ref|XP_001963070.1| GF14123 [Drosophila ananassae]
gi|190616767|gb|EDV32291.1| GF14123 [Drosophila ananassae]
Length = 192
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GT++YV NL V DD+ F++ G+L I F+ P G A V + R DA A
Sbjct: 6 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFN----PPGFAFVEFEHRDDAEKACD 61
Query: 158 RYNNVLLDGKPMKIEV 173
N L G +++E+
Sbjct: 62 ILNGSELLGSQLRVEI 77
>gi|345479146|ref|XP_003423886.1| PREDICTED: sex-lethal homolog isoform 2 [Nasonia vitripennis]
Length = 393
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 93 SGIEVG-TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRS 150
SG E+ T LYV+NL +T + E+FS+ G++ + I DK G P G A V Y +R
Sbjct: 178 SGEEIKETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPRGVAFVRYDKRE 237
Query: 151 DAFAALKRYNNVLLDG--KPMKIEV 173
+A A+ + + + +G +P+ +++
Sbjct: 238 EAQDAINQLHGTIPEGGSEPLSVKI 262
>gi|345479148|ref|XP_003423887.1| PREDICTED: sex-lethal homolog isoform 3 [Nasonia vitripennis]
Length = 376
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 93 SGIEVG-TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRS 150
SG E+ T LYV+NL +T + E+FS+ G++ + I DK G P G A V Y +R
Sbjct: 161 SGEEIKETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPRGVAFVRYDKRE 220
Query: 151 DAFAALKRYNNVLLDG--KPMKIEV 173
+A A+ + + + +G +P+ +++
Sbjct: 221 EAQDAINQLHGTIPEGGSEPLSVKI 245
>gi|406864178|gb|EKD17224.1| RNA binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 292
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 78 WQHDLFE----------DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
W HD F+ D V +KL V NLH + +D+ +LF+ IG +
Sbjct: 48 WVHDKFDNDTGRRPNRPDRRYTPDPVYDAVSSKLRVENLHYDLLEEDLEDLFNTIGPVIN 107
Query: 128 YAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKI 171
+ +D+ GR G A V Y SDA A++ ++ G+P+++
Sbjct: 108 LTLTYDRAGRSEGVAYVTYETASDAKKAIREFDGANAKGQPIRL 151
>gi|299741815|ref|XP_001832059.2| RNP domain-containing protein [Coprinopsis cinerea okayama7#130]
gi|298404895|gb|EAU89705.2| RNP domain-containing protein [Coprinopsis cinerea okayama7#130]
Length = 588
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+LYV NL D+++LF G + R I+ +GRP GS VV+ DA A+ Y
Sbjct: 305 QLYVGNLPYQAGWQDLKDLFRAAGSIVRADINIGVDGRPKGSGTVVFETVKDAQQAISMY 364
Query: 160 NNVLLDGKPMKI 171
N G+ +++
Sbjct: 365 NGFDWYGRILEV 376
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E ++ V NL N+D+ ELF G+++ I FD R G V +A S+A A
Sbjct: 489 EPSQQIMVRNLPWSTANEDLVELFETTGQVEVAEILFD-GARSKGCGVVQFALTSEAETA 547
Query: 156 LKRYNNVLLDGKPMKI 171
+ ++ + + G+P+ +
Sbjct: 548 IAKFQHYMYGGRPLDV 563
>gi|354547901|emb|CCE44636.1| hypothetical protein CPAR2_404400 [Candida parapsilosis]
Length = 224
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D SLDDII S KKS + R R G G + + G ++ G + + R
Sbjct: 1 MSASLDKSLDDIISSSKKSFKSR---RPGAKIGGGAKGNQNKVGKKLVGNKTKKTATFKR 57
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF- 119
P+ A + P DL TK+ V+ L + D+IRE F
Sbjct: 58 PNGPKPAAAAAAAAAVPA-FDL-------------SYATKVNVTGLPKDLKQDNIREFFQ 103
Query: 120 SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG--KPMKIEVVGTN 177
S++G ++ A+ +++ G+ G A V++ +A A+++Y+ +DG + +E++
Sbjct: 104 SQVGGVQTVALSYNERGQFKGVATVIFKSNKNAALAVEKYHGASIDGGKGKLSLELIIDT 163
Query: 178 AEIPLQARV 186
+ PL AR+
Sbjct: 164 TKKPLAARI 172
>gi|440483482|gb|ELQ63869.1| hypothetical protein OOW_P131scaffold00926g5 [Magnaporthe oryzae
P131]
Length = 362
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 40/74 (54%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+ + L VT D +R++F + GE++ + ++ G G+A ++Y + DA +A+ +
Sbjct: 132 IVIERLTKNVTEDHLRDIFGQYGEIRDLDLPINRQGTNRGTAYILYVQEPDAESAIAHMH 191
Query: 161 NVLLDGKPMKIEVV 174
+DG + + +V
Sbjct: 192 EGQIDGATVNVSIV 205
>gi|336375600|gb|EGO03936.1| hypothetical protein SERLA73DRAFT_84149 [Serpula lacrymans var.
lacrymans S7.3]
Length = 421
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G +LYV NL D+++LF G + R I+ +GRP GS VV+ DA A+
Sbjct: 140 GNQLYVGNLPYQAGWQDLKDLFRAAGNIIRADINIGADGRPKGSGTVVFETPKDAQQAIS 199
Query: 158 RYNNVLLDGKPMKI 171
Y+ G+ +++
Sbjct: 200 MYHGFDWYGRTLEV 213
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E ++ V NL N+D+ ELF G+++ I FD R G V +A+ +A A
Sbjct: 321 EPSQQIMVRNLPWSTANEDLVELFETTGQVELAEILFDGT-RSKGCGVVQFAQMPEAETA 379
Query: 156 LKRYNNVLLDGKPMKI 171
+ ++ + G+P+ +
Sbjct: 380 IAKFQQYMYGGRPLDV 395
>gi|262199927|ref|YP_003271136.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262083274|gb|ACY19243.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 207
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIG-ELKRYAIHFDKN-GRPSGSAEVVYARRSDAFA 154
+G+KLYV NL T + +R +F E G E++ AI D+ GR G A V A A
Sbjct: 1 MGSKLYVGNLSYSTTEEALRSVFEEGGKEVRSVAIILDRETGRSRGFAFVQMASEDAARE 60
Query: 155 ALKRYNNVLLDGKPMKI 171
A++ + LDG+ M+I
Sbjct: 61 AMESLDGRELDGRQMRI 77
>gi|409074961|gb|EKM75348.1| hypothetical protein AGABI1DRAFT_46641 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 579
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G +LYV NL D+++LF G + R I+ +GRP GS VV+ DA A+
Sbjct: 300 GNQLYVGNLPYQAGWQDLKDLFRNAGSIIRADINIGADGRPKGSGTVVFETVKDAQQAIN 359
Query: 158 RYNNVLLDGKPMKI 171
Y+ G+ +++
Sbjct: 360 IYHGYDWYGRTLEV 373
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E ++ V NL N+D+ ELF G+++ I FD R G V +A+ +A A
Sbjct: 478 EPSQQIMVRNLPWSTANEDLVELFETTGQVELAEILFDGT-RSKGCGVVQFAQIVEAETA 536
Query: 156 LKRYNNVLLDGKPMKI 171
+ ++ N + G+P+ +
Sbjct: 537 IAKFQNYVYGGRPLDV 552
>gi|332029988|gb|EGI69813.1| Sex-lethal-like protein [Acromyrmex echinatior]
Length = 365
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRSDAFAALK 157
T LYV+NL +T I ELFS+ G + + I DK G P G A V + +R +A A+
Sbjct: 181 TNLYVTNLPRNITESQIDELFSKYGNIVQKNILRDKLTGLPRGVAFVRFDKREEAQEAIA 240
Query: 158 RYNNVLLDG--KPMKIEV 173
R + + +G +P+ +++
Sbjct: 241 RLHGTIPEGGSEPLSVKI 258
>gi|348504948|ref|XP_003440023.1| PREDICTED: heterogeneous nuclear ribonucleoprotein M-like
[Oreochromis niloticus]
Length = 701
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRS 150
G+ +G+ ++V+NL V ++E+FS G + R I DK+G+ G V +
Sbjct: 218 GLQAGRIGSTVFVANLDYKVGWKKLKEVFSMAGMVVRADILEDKDGKSRGMGTVTFDLPI 277
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
+A A+ +N LL + M +++
Sbjct: 278 EAVQAVSMFNGQLLFNRTMHVKL 300
>gi|347976363|ref|XP_003437511.1| unnamed protein product [Podospora anserina S mat+]
gi|170940369|emb|CAP65596.1| unnamed protein product [Podospora anserina S mat+]
Length = 338
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAAL 156
TK+ V L V D +RE+F + GE++ + ++ G G+A +++ +DA AA+
Sbjct: 110 STKIVVERLTKNVNEDHLREIFGQYGEIEDLDLPLNRQLGTNRGTAYILFYNEADAEAAI 169
Query: 157 KRYNNVLLDGKPMKIEVV 174
+ +DG + + +V
Sbjct: 170 AHMHEATVDGAVINVSIV 187
>gi|347826863|emb|CCD42560.1| hypothetical protein [Botryotinia fuckeliana]
Length = 371
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAAL 156
TK+ + L VT D +RE+F GE+K + +++ + G+A ++Y S A +A+
Sbjct: 139 STKVVIEKLTKNVTEDHLREIFGSFGEIKDLDVPMNRSFNTNRGTAYILYVSPSSAESAI 198
Query: 157 KRYNNVLLDGKPMKIEVV 174
+ LDG + + +V
Sbjct: 199 AHMHESQLDGAVINVSIV 216
>gi|367034339|ref|XP_003666452.1| hypothetical protein MYCTH_2084160, partial [Myceliophthora
thermophila ATCC 42464]
gi|347013724|gb|AEO61207.1| hypothetical protein MYCTH_2084160, partial [Myceliophthora
thermophila ATCC 42464]
Length = 255
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAAL 156
TK+ V L V D + E+F E GE+ + + ++G G+A ++Y +DA AA+
Sbjct: 112 STKIVVERLTKNVNEDHLCEIFGEYGEIDDLDLPVNRQSGLNRGTAYILYFNEADAQAAI 171
Query: 157 KRYNNVLLDGKPMKIEVV 174
+ LDG + + +V
Sbjct: 172 THMHEAQLDGSTIHVSIV 189
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
Length = 174
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRSDAFAA 155
+ TK+YV NL T+D +R+ FS G++ + D+ GR G V ++ +A +A
Sbjct: 1 MSTKVYVGNLSWNTTDDTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFVTFSSSGEAESA 60
Query: 156 LKRYNNVLLDGKPMKIEV 173
+ N LDG+ +K+ +
Sbjct: 61 ISSLNEQELDGRRIKVNL 78
>gi|268572859|ref|XP_002641430.1| C. briggsae CBR-RSP-8 protein [Caenorhabditis briggsae]
Length = 298
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAE----VVYARRSDAFAALKR 158
V NL T D+R++F E GE+++ + +D RPSG++ + + + DA AA ++
Sbjct: 76 VFNLSSYTTEKDLRDVFGEFGEIEKCDLVYD---RPSGNSRGFGFIYFEQIDDAAAAREK 132
Query: 159 YNNVLLDGKPMKIEVVGT 176
N LDG ++++ T
Sbjct: 133 LCNTDLDGHKIRVDYSFT 150
>gi|426195444|gb|EKV45374.1| hypothetical protein AGABI2DRAFT_120330 [Agaricus bisporus var.
bisporus H97]
Length = 399
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E ++ V NL N+D+ ELF G+++ I FD R G V +A+ +A A
Sbjct: 298 EPSQQIMVRNLPWSTANEDLVELFETTGQVELAEILFDGT-RSKGCGVVQFAQIVEAETA 356
Query: 156 LKRYNNVLLDGKPMKI 171
+ ++ N + G+P+ +
Sbjct: 357 IAKFQNYVYGGRPLDV 372
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G +LYV NL D+++LF G + R I+ +GRP GS VV+ DA A+
Sbjct: 112 GNQLYVGNLPYQAGWQDLKDLFRNAGSIIRADINIGADGRPKGSGTVVFETVKDAQQAIS 171
Query: 158 R----YNNVL-LDGKPMKI 171
+ Y L LDG+ + +
Sbjct: 172 QDFLSYLPWLRLDGRTLAV 190
>gi|226494446|ref|NP_001150292.1| RNA binding protein [Zea mays]
gi|195638140|gb|ACG38538.1| RNA binding protein [Zea mays]
gi|414590125|tpg|DAA40696.1| TPA: RNA binding protein [Zea mays]
Length = 267
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALK 157
+ +YVSNL +TN DI LFS G + R + D+ R S G A V++ R DA AA
Sbjct: 54 STVYVSNLDFSLTNSDIHLLFSRFGRVARVTVLKDRESRRSRGVAFVLFVLREDAAAAAA 113
Query: 158 RYNNVLLDGKPMKIEVVGTN 177
+ +L+G+ + + N
Sbjct: 114 EMHGKVLNGRTLSASIADDN 133
>gi|156409337|ref|XP_001642126.1| predicted protein [Nematostella vectensis]
gi|156229267|gb|EDO50063.1| predicted protein [Nematostella vectensis]
Length = 441
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELK--------RYAIHFDKNGRPSGSAEVVYARRSDA 152
++VSN+ P T +DI+ LF IG +K + I+ +G G V Y A
Sbjct: 222 IFVSNMSPNSTEEDIKGLFGSIGIIKIDKKLQKPKIWIYKHPDGSSKGECTVTYEDPPTA 281
Query: 153 FAALKRYNNVLLDGKPMKIEV 173
AA++ +N G+ +K+E+
Sbjct: 282 SAAIEWFNGKDFMGQSIKVEL 302
>gi|156040784|ref|XP_001587378.1| hypothetical protein SS1G_11370 [Sclerotinia sclerotiorum 1980]
gi|154695754|gb|EDN95492.1| hypothetical protein SS1G_11370 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 338
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALK 157
TK+ + L VT D +RE+F GE+K + +++ + G+A ++Y A +A+
Sbjct: 105 TKVVIEKLTKNVTEDHLREIFGSYGEIKDLDVPMNRSFNTNRGTAYILYVSAESAESAIA 164
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVN 192
+ LDG + + +V + Q + GVN
Sbjct: 165 HMHESQLDGAIINVSIVLPRRKFSPQPPMARRGVN 199
>gi|357159880|ref|XP_003578586.1| PREDICTED: uncharacterized protein LOC100826392 [Brachypodium
distachyon]
Length = 269
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALK 157
+ +YVSNL +TN D+ LFS G++ R + D+ R S G A V++ RR +A AA
Sbjct: 60 STVYVSNLDFALTNSDLHTLFSRFGKVARVTVLKDRESRRSRGVAFVLFVRREEAAAAAA 119
Query: 158 RYNNVLLDGKPMKIEVVGTN 177
+ +L+G+ + + N
Sbjct: 120 EMHGKVLNGRTLAASIADDN 139
>gi|126314629|ref|XP_001373122.1| PREDICTED: nucleolin-like [Monodelphis domestica]
Length = 705
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN--GRPSGSAEVVYARRSDAFAALKR 158
L ++NL T + ++E+F K +I +N GRP G A + +A DA AL
Sbjct: 479 LVLNNLAYSATEESLQEVFE-----KATSISLPQNNQGRPKGYAFIEFASVEDAKEALNS 533
Query: 159 YNNVLLDGKPMKIEVVG 175
NN+ ++G+ +++E+ G
Sbjct: 534 CNNIEIEGRAIRLELKG 550
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L+V NL VT ++++E+F + E++ + K+G P G A V + +D AL+
Sbjct: 379 LFVKNLPYKVTQEELKEVFEDAIEIR---LVCTKDGTPKGIAYVEFKTEADVDKALEEKQ 435
Query: 161 NVLLDGKPMKIEVVG 175
+DG+ + ++ G
Sbjct: 436 GTEIDGRALILDYTG 450
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAA 155
+ K+YV NL T+D +R+ FSE G++ + D++ GR G V ++ +A AA
Sbjct: 1 MSAKVYVGNLSWNTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAA 60
Query: 156 LKRYNNVLLDGKPMKIEV 173
+ N LDG+ +K+ +
Sbjct: 61 IGGLNEQELDGRRIKVNL 78
>gi|340729596|ref|XP_003403084.1| PREDICTED: protein sex-lethal-like [Bombus terrestris]
Length = 356
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 93 SGIEVG-TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRS 150
SG E+ T LYV+NL +T I ++FS+ G + + I DK G P G A V + +R
Sbjct: 164 SGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDKRE 223
Query: 151 DAFAALKRYNNVLLDG--KPMKIEV 173
+A A+ R + + +G +P+ +++
Sbjct: 224 EAQEAIARLHGTIPEGGSEPLSVKI 248
>gi|350411267|ref|XP_003489292.1| PREDICTED: protein sex-lethal-like [Bombus impatiens]
Length = 356
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 93 SGIEVG-TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRS 150
SG E+ T LYV+NL +T I ++FS+ G + + I DK G P G A V + +R
Sbjct: 164 SGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDKRE 223
Query: 151 DAFAALKRYNNVLLDG--KPMKIEV 173
+A A+ R + + +G +P+ +++
Sbjct: 224 EAQEAIARLHGTIPEGGSEPLSVKI 248
>gi|341884156|gb|EGT40091.1| hypothetical protein CAEBREN_06614 [Caenorhabditis brenneri]
Length = 239
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 38/199 (19%)
Query: 2 ATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP 61
A +VDMSL+DII +K+ + GR P TG RR S
Sbjct: 4 ANNVDMSLEDIISKTRKTNNSIQKKPFGGGRRGNGRP---------TGIPRRSGSSGG-- 52
Query: 62 SSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLY---VSNLHPGVTNDDIREL 118
W+ DL D + GI+ ++ +SNL V + D+ EL
Sbjct: 53 ----------------WK-DL--DDVNNHGITSRGNDNRIIRVNISNLATSVISSDLEEL 93
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
F L+ +++F+++G G+ ++ +R DA ++ +N V LD K MK ++ N+
Sbjct: 94 FQNY-RLQSASVNFNEHGESLGTGDISLPKR-DAEKLIREFNGVALDSKMMKFAIIDGNS 151
Query: 179 ---EIPLQARVNVTGVNGR 194
+ R NV +GR
Sbjct: 152 MAGRVDFGTRRNVPASSGR 170
>gi|396499673|ref|XP_003845532.1| hypothetical protein LEMA_P008400.1 [Leptosphaeria maculans JN3]
gi|312222113|emb|CBY02053.1| hypothetical protein LEMA_P008400.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
++YV+NL V D+++LF + G + R +H +GRP GS V + DA A+
Sbjct: 220 QVYVANLPYNVGWQDLKDLFRQAAHTGSVIRADVHIAPDGRPKGSGIVAFETPEDARNAI 279
Query: 157 KRYNNVLLDGKPMKI 171
++N G+ +++
Sbjct: 280 NQFNGYDWQGRNLEV 294
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 18/86 (20%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSD- 151
SG E +YV NL +N+D+ ELF+ IG+++R I ++ NGR G+ V + + +D
Sbjct: 382 SGGEPSNTIYVRNLPWSTSNEDLIELFTTIGKVERAEIQYEPNGRSRGTGVVEFEKEADA 441
Query: 152 -----------------AFAALKRYN 160
+K N
Sbjct: 442 ETAISKFTGYQYGGRPLGLTYVKYTN 467
>gi|341884162|gb|EGT40097.1| hypothetical protein CAEBREN_18049 [Caenorhabditis brenneri]
Length = 239
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 2 ATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP 61
A +VDMSL+DII +K+ + GR P TG RR S
Sbjct: 4 ANNVDMSLEDIISKTRKTNNSIQKKPFGGGRRGNGRP---------TGIPRRSGSSGG-- 52
Query: 62 SSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLY---VSNLHPGVTNDDIREL 118
W+ DL D + GI+ ++ +SNL V + D+ EL
Sbjct: 53 ----------------WK-DL--DDVNNHGITSRGNDNRIIRVNISNLATSVISSDLEEL 93
Query: 119 FSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNA 178
F L+ +++F+++G G+ ++ +R DA ++ +N V LD K MK ++ N+
Sbjct: 94 FQNY-RLQSVSVNFNEHGESLGTGDISLPKR-DAEKLIREFNGVALDSKMMKFAIIDGNS 151
>gi|148708277|gb|EDL40224.1| nucleolin, isoform CRA_e [Mus musculus]
Length = 706
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L +SNL T + + E+F + +K + + +G+P G A + +A DA AL N
Sbjct: 488 LVLSNLSYSATKETLEEVFEKATFIK---VPQNPHGKPKGYAFIEFASFEDAKEALNSCN 544
Query: 161 NVLLDGKPMKIEVVGTNA 178
+ ++G+ +++E+ G+N+
Sbjct: 545 KMEIEGRTIRLELQGSNS 562
>gi|26325114|dbj|BAC26311.1| unnamed protein product [Mus musculus]
Length = 707
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L +SNL T + + E+F + +K + + +G+P G A + +A DA AL N
Sbjct: 489 LVLSNLSYSATKETLEEVFEKATFIK---VPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 161 NVLLDGKPMKIEVVGTNA 178
+ ++G+ +++E+ G+N+
Sbjct: 546 KMEIEGRTIRLELQGSNS 563
>gi|148708274|gb|EDL40221.1| nucleolin, isoform CRA_b [Mus musculus]
Length = 488
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L +SNL T + + E+F + +K + + +G+P G A + +A DA AL N
Sbjct: 273 LVLSNLSYSATKETLEEVFEKATFIK---VPQNPHGKPKGYAFIEFASFEDAKEALNSCN 329
Query: 161 NVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGS 220
+ ++G+ +++E+ G+N+ + V G++ + S G+ +R GS
Sbjct: 330 KMEIEGRTIRLELQGSNSRSQPSKTLFVKGLSEDTTEETLKESFEGSVRARIVTDRETGS 389
Query: 221 QGRRGGLRRSSQGRGRGQGQGRGRGRGGG 249
G + +S+ + + G G
Sbjct: 390 SKGFGFVDFNSEEDAKAAKEAMEDGEIDG 418
>gi|84875537|ref|NP_035010.3| nucleolin [Mus musculus]
gi|128843|sp|P09405.2|NUCL_MOUSE RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|12802527|gb|AAK07920.1|AF318184_1 nucleolin [Mus musculus]
gi|53454|emb|CAA30538.1| nucleolin [Mus musculus]
gi|26350437|dbj|BAC38858.1| unnamed protein product [Mus musculus]
gi|74179984|dbj|BAE36542.1| unnamed protein product [Mus musculus]
gi|74194436|dbj|BAE37270.1| unnamed protein product [Mus musculus]
gi|74201341|dbj|BAE26119.1| unnamed protein product [Mus musculus]
gi|148708278|gb|EDL40225.1| nucleolin, isoform CRA_f [Mus musculus]
Length = 707
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L +SNL T + + E+F + +K + + +G+P G A + +A DA AL N
Sbjct: 489 LVLSNLSYSATKETLEEVFEKATFIK---VPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 161 NVLLDGKPMKIEVVGTNA 178
+ ++G+ +++E+ G+N+
Sbjct: 546 KMEIEGRTIRLELQGSNS 563
>gi|13529464|gb|AAH05460.1| Nucleolin [Mus musculus]
Length = 707
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L +SNL T + + E+F + +K + + +G+P G A + +A DA AL N
Sbjct: 489 LVLSNLSYSATKETLEEVFEKATFIK---VPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 161 NVLLDGKPMKIEVVGTNA 178
+ ++G+ +++E+ G+N+
Sbjct: 546 KMEIEGRTIRLELQGSNS 563
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAALKRY 159
L+V NL D ++ELF E G + + D + GRP G V +A +A A
Sbjct: 371 LFVGNLPFSANEDSVQELFGEKGSIVGIRLPTDPDSGRPKGFGYVQFASVDEAREAFNSL 430
Query: 160 NNVLLDGKPMKIEV 173
N LDG+P++++
Sbjct: 431 NGAELDGRPVRLDF 444
>gi|74179817|dbj|BAE36484.1| unnamed protein product [Mus musculus]
Length = 707
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L +SNL T + + E+F + +K + + +G+P G A + +A DA AL N
Sbjct: 489 LVLSNLSYSATKETLEEVFEKATFIK---VPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 161 NVLLDGKPMKIEVVGTNA 178
+ ++G+ +++E+ G+N+
Sbjct: 546 KMEIEGRTIRLELQGSNS 563
>gi|74214426|dbj|BAE40448.1| unnamed protein product [Mus musculus]
gi|74219790|dbj|BAE40485.1| unnamed protein product [Mus musculus]
Length = 707
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L +SNL T + + E+F + +K + + +G+P G A + +A DA AL N
Sbjct: 489 LVLSNLSYSATKETLEEVFEKATFIK---VPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 161 NVLLDGKPMKIEVVGTNA 178
+ ++G+ +++E+ G+N+
Sbjct: 546 KMEIEGRTIRLELQGSNS 563
>gi|74177681|dbj|BAE38940.1| unnamed protein product [Mus musculus]
Length = 707
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L +SNL T + + E+F + +K + + +G+P G A + +A DA AL N
Sbjct: 489 LVLSNLSYSATKETLEEVFEKATFIK---VPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 161 NVLLDGKPMKIEVVGTNA 178
+ ++G+ +++E+ G+N+
Sbjct: 546 KMEIEGRTIRLELQGSNS 563
>gi|26341628|dbj|BAC34476.1| unnamed protein product [Mus musculus]
Length = 550
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 69/162 (42%), Gaps = 3/162 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L +SNL T + + E+F + +K + + +G+P G A + +A DA AL N
Sbjct: 332 LVLSNLSYSATKETLEEVFEKATFIK---VPQNPHGKPKGYAFIEFASFEDAKEALNSCN 388
Query: 161 NVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGS 220
+ ++G+ +++E+ G+N+ + V G++ + S G+ +R GS
Sbjct: 389 KMEIEGRTIRLELQGSNSRSQPSKTLFVKGLSEDTTEETLKESFEGSVRARIVTDRETGS 448
Query: 221 QGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRGRGRGRGR 262
G + +S+ + + G G + +G
Sbjct: 449 SKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGE 490
>gi|148708273|gb|EDL40220.1| nucleolin, isoform CRA_a [Mus musculus]
Length = 537
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L +SNL T + + E+F + +K + + +G+P G A + +A DA AL N
Sbjct: 319 LVLSNLSYSATKETLEEVFEKATFIK---VPQNPHGKPKGYAFIEFASFEDAKEALNSCN 375
Query: 161 NVLLDGKPMKIEVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAINRGPGS 220
+ ++G+ +++E+ G+N+ + V G++ + S G+ +R GS
Sbjct: 376 KMEIEGRTIRLELQGSNSRSQPSKTLFVKGLSEDTTEETLKESFEGSVRARIVTDRETGS 435
Query: 221 QGRRGGLRRSSQGRGRGQGQGRGRGRGGG 249
G + +S+ + + G G
Sbjct: 436 SKGFGFVDFNSEEDAKAAKEAMEDGEIDG 464
>gi|383859290|ref|XP_003705128.1| PREDICTED: sex-lethal homolog [Megachile rotundata]
Length = 386
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 93 SGIEVG-TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRS 150
SG E+ T LYV+NL +T I ++FS+ G + + I DK G P G A V + +R
Sbjct: 192 SGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKITGLPRGVAFVRFDKRE 251
Query: 151 DAFAALKRYNNVLLDG--KPMKIEV 173
+A A+ R + + +G +P+ +++
Sbjct: 252 EAQEAIARLHGTIPEGGSEPLSVKI 276
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 142
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAA 155
+ K+YV NL T+D +R+ FS+ G + + D++ GR G V Y+ +A AA
Sbjct: 1 MSAKVYVGNLSWNTTDDSLRQAFSQYGNVLDSIVMRDRDTGRSRGFGFVTYSATEEADAA 60
Query: 156 LKRYNNVLLDGKPMKIEV 173
+ ++ LDG+ +K+ +
Sbjct: 61 IASLHDQELDGRRIKVNI 78
>gi|171687819|ref|XP_001908850.1| hypothetical protein [Podospora anserina S mat+]
gi|170943871|emb|CAP69523.1| unnamed protein product [Podospora anserina S mat+]
Length = 459
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAALKRY 159
L+V NL D + F+E+ +++ I D ++GRP G A V + DA A ++
Sbjct: 319 LFVGNLPFSADEDGVSAFFNEVAKVQSLRIPTDMESGRPKGFAYVSFYSIDDAKNAFEQL 378
Query: 160 NNVLLDGKPMKIEV 173
N +DG+P++++
Sbjct: 379 NGADIDGRPVRLDF 392
>gi|26327461|dbj|BAC27474.1| unnamed protein product [Mus musculus]
Length = 707
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L +SNL T + + E+F + +K + + +G+P G A + +A DA AL N
Sbjct: 489 LVLSNLSYSATKETLEEVFEKATFIK---VPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 161 NVLLDGKPMKIEVVGTNA 178
+ ++G+ +++E+ G+N+
Sbjct: 546 KMEIEGRTIRLELQGSNS 563
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAALK 157
+ L++ NL ++ DD+ FSE GE+ + D + GRP G V +A + A AAL
Sbjct: 306 STLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAALD 365
Query: 158 RYNNVLLDGKPMKIEV 173
L G+P++++
Sbjct: 366 AMTGQELAGRPLRLDF 381
>gi|289739371|gb|ADD18433.1| alternative splicing factor SRP20/9G8 [Glossina morsitans
morsitans]
Length = 168
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GT++YV NL + DD+ F++ G+L I F+ P G A V + R DA A
Sbjct: 6 GTRVYVGNLTDKIKKDDLEGEFTKYGKLNSVWIAFN----PPGFAFVEFEHRDDAEKACD 61
Query: 158 RYNNVLLDGKPMKIEV 173
N L G +++E+
Sbjct: 62 VLNGTELLGSQLRVEI 77
>gi|198425734|ref|XP_002119812.1| PREDICTED: similar to HUC, partial [Ciona intestinalis]
Length = 408
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 68 KSFRRTRNFPWQHDLFEDSL-RAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELK 126
K+ ++ P QH + + + AG + LYV+ L+P + + +++ FS G +
Sbjct: 139 KAIQQLNGHPIQHKTIKVAFSKPAGADSKNI--NLYVAGLNPDTSEESLKQRFSSYGTII 196
Query: 127 RYAIHFDKN-GRPSGSAEVVYARRSDAFAALKRYNNVLL---DGKPMKIEVVGTNAEIP 181
+ + DKN SG V++ + +A AA+K N + P+ ++ T+ ++P
Sbjct: 197 QTRVLKDKNTNLCSGIGFVLFNTKDEAMAAIKALNGAVFSQASTSPLVVKFAKTDQKVP 255
>gi|346977749|gb|EGY21201.1| hypothetical protein VDAG_02725 [Verticillium dahliae VdLs.17]
Length = 309
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
TK+ V L V D + E+F + G +K + ++ G G+A ++Y +DA A+
Sbjct: 76 STKIVVERLTKNVNEDHLYEIFGQFGHVKDLDLPINRMGTNRGTAYILYDDEADAEDAIA 135
Query: 158 RYNNVLLDGKPMKIEVV 174
+ LDG + + +V
Sbjct: 136 NMHEAQLDGAVINVSIV 152
>gi|302420471|ref|XP_003008066.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261353717|gb|EEY16145.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 310
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
TK+ V L V D + E+F + G +K + ++ G G+A ++Y +DA A+
Sbjct: 76 STKIVVERLTKNVNEDHLYEIFGQFGRVKDLDLPINRMGTNRGTAYILYDDEADAEDAIA 135
Query: 158 RYNNVLLDGKPMKIEVV 174
+ LDG + + +V
Sbjct: 136 NMHEAQLDGAVINVSIV 152
>gi|224012523|ref|XP_002294914.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
gi|220969353|gb|EED87694.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
Length = 612
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAAL 156
G LYV NL VT+D +R+ FS +G + + D K G G V Y+ DA A+
Sbjct: 294 GVNLYVKNLDDTVTDDVLRDEFSAMGTITSARVMKDLKTGISRGFGFVCYSTPEDATRAV 353
Query: 157 KRYNNVLLDGKPMKIEV 173
N ++ GKP+ + +
Sbjct: 354 NEMNGKIILGKPIFVAL 370
>gi|406607797|emb|CCH40902.1| Embryonic polyadenylate-binding protein 2 [Wickerhamomyces
ciferrii]
Length = 228
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRSDAFAALKRY 159
+Y+ N+ T +++ E FS+IG + R I FD+ GRP G A V + +S +A+
Sbjct: 74 VYIGNVDYNTTPEELEEFFSKIGTINRVTILFDRFTGRPKGYAYVEFESQSSVDSAIG-- 131
Query: 160 NNVLLDGKPMKIEVVGTN 177
L G+ K ++ N
Sbjct: 132 ----LSGQEFKDRIISVN 145
>gi|218202578|gb|EEC85005.1| hypothetical protein OsI_32292 [Oryza sativa Indica Group]
Length = 307
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALK 157
+ +YVS+L +T D+ LFS G + R + D++ R S G A V++ RR DA AA
Sbjct: 103 STVYVSHLDFALTYSDLHTLFSRFGRVARVTVLKDRDSRRSRGVAFVLFVRREDAAAAAA 162
Query: 158 RYNNVLLDGKPMKIEVVGTN 177
+ +L+G+ + + N
Sbjct: 163 EMHGKVLNGRTLSASIAEDN 182
>gi|402075304|gb|EJT70775.1| hypothetical protein GGTG_11798 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 345
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 88 RAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVY 146
R A S TK+ V L V D ++E+F G++ + ++ G G+A ++Y
Sbjct: 89 RGASKSPAPRNTKIVVERLTKNVNEDHLQEIFGTYGQIVDLDLPVNRQLGTNRGTAYILY 148
Query: 147 ARRSDAFAALKRYNNVLLDGKPMKIEVV 174
AR DA AA+ + +DG + + +V
Sbjct: 149 AREPDAEAAIAHMHEGQIDGATVNVSIV 176
>gi|448517553|ref|XP_003867824.1| Cbc2 protein [Candida orthopsilosis Co 90-125]
gi|380352163|emb|CCG22387.1| Cbc2 protein [Candida orthopsilosis]
Length = 216
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG-RPSGSAEVVYARRSDAFAALKRY 159
+YV NL T + I ELF + G + + + D+N P G V+Y A A+K
Sbjct: 42 VYVGNLSHFTTEEQIHELFMKCGAIDKIIMGLDRNKLTPCGFCFVIYRTEQGAPNAMKYL 101
Query: 160 NNVLLDGKPMKIEV 173
+ +LD + + I++
Sbjct: 102 QSTILDSQSISIDL 115
>gi|418528344|ref|ZP_13094294.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
gi|371454720|gb|EHN67722.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
Length = 163
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAA 155
+G KLYV NL GV ++D+ + FS+ G + + +++ GR G V A ++A AA
Sbjct: 1 MGNKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAA 60
Query: 156 LKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTG 190
++ N L G+ + + N P++ R TG
Sbjct: 61 IQGMNGQPLGGRSLVV-----NEARPMEPRPPRTG 90
>gi|432853551|ref|XP_004067763.1| PREDICTED: heterogeneous nuclear ribonucleoprotein M-like [Oryzias
latipes]
Length = 689
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRS 150
G+ +G+ ++V+NL V ++E+F G + R I DK+G+ G V +
Sbjct: 210 GLQAGRIGSTVFVANLDYKVGWKKLKEVFGMAGMVVRTDILEDKDGKSRGMGTVTFEMPI 269
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
+A A+ +N LL + M +++
Sbjct: 270 EAVQAVSMFNGQLLFNRTMHVKL 292
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAALK 157
+ L++ NL V+ DD+ FSE GE+ + D + GRP G V +A + A AA+
Sbjct: 312 STLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAID 371
Query: 158 RYNNVLLDGKPMKIEV 173
L G+P++++
Sbjct: 372 AMTGQELAGRPLRLDF 387
>gi|402224642|gb|EJU04704.1| RNA-binding domain-containing protein, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 389
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L++S L VT D+++ F G++++ + D R G A VVY R D AA K
Sbjct: 115 LFISRLSKKVTEKDLQKEFERYGDIEQIRLVRDPQARSRGYAFVVYERERDMKAAYKDAE 174
Query: 161 NVLLDGKPMKIEV 173
++L GK + ++V
Sbjct: 175 GLVLLGKRILVDV 187
>gi|375298754|ref|NP_001243560.1| heterogeneous nuclear ribonucleoprotein M [Danio rerio]
Length = 686
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRS 150
G+ ++G+ ++V+NL V ++E+F G + R I DK+G+ G V +
Sbjct: 196 GLQAGKIGSTIFVANLDYKVGWKKLKEVFGMAGMVVRADILEDKDGKSRGMGTVTFDMPI 255
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
+A A+ +N LL + M +++
Sbjct: 256 EAVQAVSMFNGQLLFNRVMHVKL 278
>gi|62859395|ref|NP_001016035.1| myelin expression factor 2 [Xenopus (Silurana) tropicalis]
gi|170285107|gb|AAI61028.1| myelin expression factor 2 [Xenopus (Silurana) tropicalis]
Length = 616
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Query: 28 ARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSL 87
ARR RG G G +GG S+ P I S N P + +L
Sbjct: 162 ARRALSRGGGGGGGGAGGGPFPGGHG---SDMAPGITNIPPSIVNNPNIPPE---IIGAL 215
Query: 88 RAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYA 147
RA +GT ++V+NL V ++E+F G +KR I DK+G+ G V +
Sbjct: 216 RAG-----RLGTTVFVANLDFKVGWKKLKEVFCIAGTVKRADIKEDKDGKSRGMGTVTFE 270
Query: 148 RRSDAFAALKRYNNVLLDGKPMKIEV 173
+ +A A+ +N L +PM +++
Sbjct: 271 QPIEAVQAISMFNGQFLFDRPMHVKM 296
>gi|353243308|emb|CCA74865.1| related to heterogeneous nuclear ribonucleoprotein [Piriformospora
indica DSM 11827]
Length = 475
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
G +LYV NL D+++LF G + R I+ +GR GS VV+ DA +A+
Sbjct: 231 GNQLYVGNLPYQAGWQDLKDLFRNAGNIVRADINIGIDGRAKGSGTVVFETAKDAQSAIS 290
Query: 158 RYNNVLLDGKPMKI 171
Y+ G+ +++
Sbjct: 291 MYHGYEWYGRTLEV 304
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora indica
DSM 11827]
Length = 236
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAA 155
+ K+YV NL T+D +RE F + G + + D + GR G V Y+ +A A
Sbjct: 1 MSAKIYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNA 60
Query: 156 LKRYNNVLLDGKPMKIEV 173
+ N LDG+ +K+ +
Sbjct: 61 ISGLNETSLDGRQIKVNL 78
>gi|341880258|gb|EGT36193.1| CBN-RSP-8 protein [Caenorhabditis brenneri]
Length = 307
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAE----VVYARRSDAFAALKR 158
V NL T D+R++F E GE+ + + +D RPSG++ + + DA AA ++
Sbjct: 88 VFNLSSYTTEKDLRDVFGEFGEIDKCDLVYD---RPSGNSRGFGFIYFNLLEDATAAREK 144
Query: 159 YNNVLLDGKPMKIEVVGT 176
N LDG ++++ T
Sbjct: 145 LCNTDLDGHKIRVDYSFT 162
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAAL 156
G K+YV NL T+D +R+ F + G++ + D + GR G V ++ +A ++
Sbjct: 3 GAKVYVGNLSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEISI 62
Query: 157 KRYNNVLLDGKPMKIEV 173
++ N LDG+ +++ +
Sbjct: 63 QQMNEQPLDGRNIRVNM 79
>gi|89269825|emb|CAJ81625.1| novel protein containing three RNA recognition motifs. (a.k.a. RRM,
RBD, or RNP domain) [Xenopus (Silurana) tropicalis]
Length = 617
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Query: 28 ARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSL 87
ARR RG G G +GG S+ P I S N P + +L
Sbjct: 163 ARRALSRGGGGGGGGAGGGPFPGGHG---SDMAPGITNIPPSIVNNPNIPPE---IIGAL 216
Query: 88 RAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYA 147
RA +GT ++V+NL V ++E+F G +KR I DK+G+ G V +
Sbjct: 217 RAG-----RLGTTVFVANLDFKVGWKKLKEVFCIAGTVKRADIKEDKDGKSRGMGTVTFE 271
Query: 148 RRSDAFAALKRYNNVLLDGKPMKIEV 173
+ +A A+ +N L +PM +++
Sbjct: 272 QPIEAVQAISMFNGQFLFDRPMHVKM 297
>gi|242025305|ref|XP_002433066.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212518582|gb|EEB20328.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 216
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAF 153
G + GT++YV L G +D+ F + G+L + F+ P G A + ++ ++DA
Sbjct: 13 GYQRGTRVYVGGLSQGTKKEDLESEFEKFGKLNNVWVAFN----PPGFAFIEFSNKTDAE 68
Query: 154 AALKRYNNVLLDGKPMKIEV 173
A N L G +++E+
Sbjct: 69 NACDSMNGTELLGGKLRVEL 88
>gi|367001903|ref|XP_003685686.1| hypothetical protein TPHA_0E01590 [Tetrapisispora phaffii CBS 4417]
gi|357523985|emb|CCE63252.1| hypothetical protein TPHA_0E01590 [Tetrapisispora phaffii CBS 4417]
Length = 252
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 20/167 (11%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D SLD+II SRKK R R RR G R +V+G R+ R N R
Sbjct: 1 MSAALDKSLDEIIGSRKKPARARITN-TRRAAGPRRVAKNAVAGRRVALTQR-----NVR 54
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
A + R A + ++ V L + D +RE FS
Sbjct: 55 ARVQRAAAPV-------------NAAQRVAALLQNTKEARVNVEGLPREIKQDAVREFFS 101
Query: 121 -EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDG 166
E+G ++R + +++ G +G A + + A A+ ++N +DG
Sbjct: 102 SEVGGVQRVLLSYNERGNSTGMATITFRNGEMAKRAVAKFNGAPIDG 148
>gi|196234692|ref|ZP_03133505.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196221240|gb|EDY15797.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 126
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRSDAFAA 155
+ KLYV NL T D+++ F+E G ++ A+ DK GR G A V A +A A
Sbjct: 1 MSNKLYVGNLSFDTTEVDLQDAFAEAGTVQEVALMQDKFTGRSRGFAFVTMATPDEAQKA 60
Query: 156 LKRYNNVLLDGKPMKI 171
+ ++ L G+P+ +
Sbjct: 61 ISIFHGKTLQGRPLTV 76
>gi|393241484|gb|EJD49006.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 363
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L+++ L + D+R F G ++R I DK GR G A +V+ R D A K +
Sbjct: 125 LFIARLSKNAADADLRRAFESYGPIERVRIARDKKGRSRGYAFIVFDRERDMKVAYKEAD 184
Query: 161 NVLLDGKPMKIEV 173
+++ GK + ++V
Sbjct: 185 KMVILGKAILVDV 197
>gi|119482882|ref|XP_001261469.1| transformer-SR ribonucleoprotein, putative [Neosartorya fischeri
NRRL 181]
gi|119409624|gb|EAW19572.1| transformer-SR ribonucleoprotein, putative [Neosartorya fischeri
NRRL 181]
Length = 307
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS---GSAEVVYARRS 150
I G+ L+V+ +HP +T DI LF + G+++ +I D + + S G ++V A ++
Sbjct: 62 AINPGSNLFVTGIHPRLTESDISRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTAEQA 121
Query: 151 DAFAALKRYNNVLLDGKPMKIE 172
D AA + +++G+ + IE
Sbjct: 122 D--AAKEGLQGEVIEGRTLSIE 141
>gi|296411247|ref|XP_002835345.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629123|emb|CAZ79502.1| unnamed protein product [Tuber melanosporum]
Length = 348
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 40/187 (21%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D +LDD+++ R +R RR R RG G R TG R ++Y
Sbjct: 1 MDKALDDVVRERSHDKRSSSSSNDRRSRRNPRG------GVRKTGR---------RDNTY 45
Query: 65 TIAKSFRRTRNFPWQHDLFEDSL---------RAAGI-------SGIEVGT-KLYVSNLH 107
+ W HD ++ L RAAG + VG KL V N+H
Sbjct: 46 NDS--------LAWVHDKYDGDLGLATNEPLRRAAGSDMRHNSDTATLVGAGKLRVENIH 97
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
+ +++ LF G + + + +D+ GR G A V Y R +DA A+ ++ +G+
Sbjct: 98 YELGEEELLGLFERQGVVLKLELKYDRAGRSEGIAFVTYEREADAKRAIAEFDGANANGQ 157
Query: 168 PMKIEVV 174
P+ + +V
Sbjct: 158 PIHLTLV 164
>gi|403183501|gb|EJY58142.1| AAEL017030-PA [Aedes aegypti]
Length = 193
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E GT++YV NL V +D+ F++ G+L + F+ P G A + + + +A +A
Sbjct: 4 EKGTRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFN----PPGFAFIEFENKEEAESA 59
Query: 156 LKRYNNVLLDGKPMKIEV 173
N + G +++E+
Sbjct: 60 CDNLNGQDILGSKLRVEI 77
>gi|320591334|gb|EFX03773.1| RNA annealing protein [Grosmannia clavigera kw1407]
Length = 251
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSE-IGELKRYAIHFDKNGRPSGSAEVVYARRSD 151
+G+ +K+ VSNL V+ I++ F++ +G++KR + + G G A V++
Sbjct: 61 TGVVGESKIVVSNLPKDVSEAQIKDYFNQAVGQVKRVELSYGPGGVSRGIATVIFHHADG 120
Query: 152 AFAALKRYNNVLLDGKP 168
A A N +L+D +P
Sbjct: 121 ASKAFTELNGLLIDNRP 137
>gi|189091838|ref|XP_001929752.1| hypothetical protein [Podospora anserina S mat+]
gi|188219272|emb|CAP49252.1| unnamed protein product [Podospora anserina S mat+]
Length = 488
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+++VSNL + D+++LF + G + R +H +GRP GS VV+ DA A+
Sbjct: 222 QIFVSNLPFNIGWQDLKDLFRQSARTGGVIRADVHLGPDGRPKGSGIVVFESPDDARNAI 281
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 282 QQFNGYDWQGRVIEV 296
>gi|27803030|emb|CAD60733.1| unnamed protein product [Podospora anserina]
Length = 516
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 100 KLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAAL 156
+++VSNL + D+++LF + G + R +H +GRP GS VV+ DA A+
Sbjct: 250 QIFVSNLPFNIGWQDLKDLFRQSARTGGVIRADVHLGPDGRPKGSGIVVFESPDDARNAI 309
Query: 157 KRYNNVLLDGKPMKI 171
+++N G+ +++
Sbjct: 310 QQFNGYDWQGRVIEV 324
>gi|327281621|ref|XP_003225545.1| PREDICTED: nucleolin-like [Anolis carolinensis]
Length = 696
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN--GRPSGSAEVVYARRSDAFAALKR 158
L V+NL T + ++E+F K AI +N GRP G A V +A DA A+
Sbjct: 466 LVVNNLSYDATEESLQEVFE-----KASAIRIPQNNQGRPKGFAFVDFATAEDAKEAMNS 520
Query: 159 YNNVLLDGKPMKIEV 173
NN ++G+ +++E
Sbjct: 521 CNNTEIEGRAIRLEF 535
>gi|440791774|gb|ELR13012.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 321
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 32/105 (30%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELK---------RYAIH-------FDK---------- 134
+YVS L P T D++ ELF IG +K R +IH DK
Sbjct: 31 VYVSGLPPETTVDNLGELFGSIGIIKCPSRPFFLMRQSIHNYCVADQIDKKKRPNEKKIY 90
Query: 135 ------NGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
G+P G A V Y A AA+ +NN G +K+E+
Sbjct: 91 VYTDKATGKPKGDATVTYDDPEAAKAAINWFNNTEFMGSKIKVEI 135
>gi|328783793|ref|XP_003250344.1| PREDICTED: sex-lethal homolog [Apis mellifera]
Length = 346
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 93 SGIEVG-TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRS 150
SG E+ T LYV+NL +T I ++FS+ G + + I DK G P G A V + +R
Sbjct: 164 SGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDKRE 223
Query: 151 DAFAALKRYNNVLLDG--KPMKIEV 173
+A A+ R + + +G +P+ +++
Sbjct: 224 EAQEAIARLHGTIPEGGSEPLSVKI 248
>gi|440800950|gb|ELR21976.1| RNA recognition motif domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 325
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSE---IGELKRYAIHFDKNGRPSGSAEVVYARRSDA 152
E TKLYV+ LH + ++ELF + + ++K HF +GR G A V +A DA
Sbjct: 8 EEETKLYVAGLHWETNREKLQELFGQHGTVTDVKLIVDHF--SGRSRGFAFVSFATSEDA 65
Query: 153 FAALKRYNNVLLDGK 167
AA N+ +DG+
Sbjct: 66 TAARDAMNSADVDGR 80
>gi|242803744|ref|XP_002484236.1| transformer-SR ribonucleoprotein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717581|gb|EED17002.1| transformer-SR ribonucleoprotein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 329
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS---GSAEVVYARRSD 151
+ G+ L+V+ +HP +T DI LF + G+++ +I D + + S G ++V A ++D
Sbjct: 68 VNPGSNLFVTGIHPRLTEADISRLFEKYGDVESCSIMLDPHTKESRGFGFVKMVTAEQAD 127
Query: 152 AFAALKRYNNVLLDGKPMKIE 172
AA + ++DG + IE
Sbjct: 128 --AAKEGLQGEVIDGLTLSIE 146
>gi|403343651|gb|EJY71156.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 491
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRY 159
+L+V NL T D + + F E G + + ++GRP G A V +A +A AAL Y
Sbjct: 241 ELFVGNLSFHTTEDSLGQAFGEYGTVTNVKLP-QQDGRPKGFAFVEFATHKEAQAALDAY 299
Query: 160 NNVLLDGKPMKI 171
N +G+ ++I
Sbjct: 300 NGQDFEGRALRI 311
>gi|168704267|ref|ZP_02736544.1| RNA-binding region RNP-1 [Gemmata obscuriglobus UQM 2246]
Length = 137
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAA 155
+G KLYV NL GVT+ ++E+F+ G + + D++ GR G V +A AA
Sbjct: 1 MGKKLYVGNLSWGVTDAMLQEMFTPYGAVVSAQVIMDRDTGRSKGFGFVEMGSDQEAQAA 60
Query: 156 LKRYNNVLLDGKPMKI 171
+ + +++G+P+ +
Sbjct: 61 ISGMHGQVIEGRPLTV 76
>gi|149244846|ref|XP_001526966.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449360|gb|EDK43616.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 209
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG-RPSGSAEVVYARRSDAFAALKRY 159
+YV NL T + I ELF + G + + + D+N P G V+Y + A+K
Sbjct: 42 VYVGNLSHFTTEEQIHELFMKSGPIDKIIMGLDRNKLTPCGFCFVIYRTEEGSLNAMKYL 101
Query: 160 NNVLLDGKPMKIEV 173
+LDG+ + I++
Sbjct: 102 QATVLDGQNISIDL 115
>gi|307200250|gb|EFN80529.1| Hrp65 protein [Harpegnathos saltator]
Length = 589
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 88 RAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYA 147
RA + + + + NL P ++N+ + + FS GE++R + D G+ +G V Y
Sbjct: 237 RALKVRFAPHSSTIKIKNLTPWISNELLEKAFSVFGEVERAIVIVDDRGKSTGEGVVEYC 296
Query: 148 RRSDAFAALKR 158
R+ A AL++
Sbjct: 297 RKPSAQLALRK 307
>gi|299531903|ref|ZP_07045303.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
gi|298720078|gb|EFI61035.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
Length = 162
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAA 155
+G KLYV NL GV ++D+ + FS+ G + + +++ GR G V A ++A AA
Sbjct: 1 MGNKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAA 60
Query: 156 LKRYNNVLLDGKPMKI 171
++ N L G+ + +
Sbjct: 61 IQGMNGQPLGGRSLVV 76
>gi|264680852|ref|YP_003280762.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
gi|262211368|gb|ACY35466.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
Length = 164
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAA 155
+G KLYV NL GV ++D+ + FS+ G + + +++ GR G V A ++A AA
Sbjct: 1 MGNKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAA 60
Query: 156 LKRYNNVLLDGKPMKI 171
++ N L G+ + +
Sbjct: 61 IQGMNGQPLGGRSLVV 76
>gi|307176221|gb|EFN65860.1| Sex-lethal-like protein [Camponotus floridanus]
Length = 272
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 93 SGIEVG-TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRS 150
SG E+ T LYV+NL +T I E+FS+ G + + I DK G P G A V + +R
Sbjct: 69 SGEEIKETNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDKRE 128
Query: 151 DAFAALKRYNNVLLDG--KPMKIEV 173
+A A+ + + + +G +P+ +++
Sbjct: 129 EAQEAIAQLHGTIPEGGSEPLSVKI 153
>gi|70986996|ref|XP_748983.1| transformer-SR ribonucleoprotein [Aspergillus fumigatus Af293]
gi|66846613|gb|EAL86945.1| transformer-SR ribonucleoprotein, putative [Aspergillus fumigatus
Af293]
gi|159123248|gb|EDP48368.1| transformer-SR ribonucleoprotein, putative [Aspergillus fumigatus
A1163]
Length = 304
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS---GSAEVVYARRS 150
+ G+ L+V+ +HP +T DI LF + G+++ +I D + + S G ++V A ++
Sbjct: 62 AVNPGSNLFVTGIHPRLTESDISRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQA 121
Query: 151 DAFAALKRYNNVLLDGKPMKIE 172
D AA + +++G+ + IE
Sbjct: 122 D--AAKEGLQGEVIEGRTLSIE 141
>gi|403342322|gb|EJY70479.1| hypothetical protein OXYTRI_08772 [Oxytricha trifallax]
Length = 471
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+++ NL +IR+L + GE+K I ++G+ G A V + A A+K +N
Sbjct: 288 VFIGNLSYSTNEQNIRKLLKDCGEIKGVRIALGEDGKMKGFAHVEFEDAESAEKAMK-FN 346
Query: 161 NVLLDGKPMKIEV 173
LDG+ +K+++
Sbjct: 347 GADLDGRNIKVDI 359
>gi|212539754|ref|XP_002150032.1| transformer-SR ribonucleoprotein, putative [Talaromyces marneffei
ATCC 18224]
gi|210067331|gb|EEA21423.1| transformer-SR ribonucleoprotein, putative [Talaromyces marneffei
ATCC 18224]
Length = 341
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS---GSAEVVYARRS 150
+ G+ L+V+ +HP +T DI LF + G+++ +I D + + S G ++V A ++
Sbjct: 65 AVNPGSNLFVTGIHPRLTEADISRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQA 124
Query: 151 DAFAALKRYNNVLLDGKPMKIE 172
D AA + ++DG + IE
Sbjct: 125 D--AAKEGLQGEVIDGLTLSIE 144
>gi|361128698|gb|EHL00628.1| putative Cold-inducible RNA-binding protein [Glarea lozoyensis
74030]
Length = 170
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAALK 157
+KL++ L + +R+ F E G ++ + D++ GR G V Y + SDA AA+
Sbjct: 2 SKLFIGGLAWHTDENALRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGQESDAEAAIT 61
Query: 158 RYNNVLLDGKPMKIE 172
NN+ DG+ ++++
Sbjct: 62 AMNNIEFDGRTIRVD 76
>gi|324510250|gb|ADY44287.1| Heterogeneous nuclear ribonucleoprotein Q [Ascaris suum]
Length = 272
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 21/80 (26%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGE------LKRYA-IHFDKNGRPSGSAEVVYARRSDAF 153
LYV NL VT + ++E+FS GE +K YA IHF++ R A
Sbjct: 7 LYVRNLKEAVTEEQLKEMFSAHGEVDHVKKIKDYAFIHFNE--------------REPAV 52
Query: 154 AALKRYNNVLLDGKPMKIEV 173
A++ N +L+G P++I +
Sbjct: 53 KAMEALNGTVLEGVPIEISL 72
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAA 155
+ K+YV NL T+D +R FS+ G++ + D++ GR G V ++ ++A A
Sbjct: 1 MSAKVYVGNLSWNTTDDSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFVTFSSANEAQTA 60
Query: 156 LKRYNNVLLDGKPMKIEV 173
+ N LDG+ +++ +
Sbjct: 61 ITSLNEQELDGRRIRVNL 78
>gi|154303874|ref|XP_001552343.1| hypothetical protein BC1G_08821 [Botryotinia fuckeliana B05.10]
Length = 245
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS-GSAEVVYARRSDAFAALK 157
+++ + L VT D +RE+F GE+K + +++ + G+A ++Y S A +A+
Sbjct: 14 SRVVIEKLTKNVTEDHLREIFGSFGEIKDLDVPMNRSFNTNRGTAYILYVSPSSAESAIA 73
Query: 158 RYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTGVN 192
+ LDG + + +V + Q + GVN
Sbjct: 74 HMHESQLDGAVINVSIVLPRRKFSPQPPMARRGVN 108
>gi|351697204|gb|EHB00123.1| Nucleolin [Heterocephalus glaber]
Length = 757
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
LY+SNL T + ++E+F + +K + ++NG+ G A + +A DA AL N
Sbjct: 535 LYLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKEALNSCN 591
Query: 161 NVLLDGKPMKIEVVG 175
++G+ +++E+ G
Sbjct: 592 KREIEGRTIRLELQG 606
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAALKRY 159
L++ NL TND I+E+F+E G + R ++ D++ G G V + + +A AAL
Sbjct: 339 LFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQEEATAALDAL 398
Query: 160 NNVLLDGKPMKIE 172
N + G+ ++I+
Sbjct: 399 NGQDIAGRNIRID 411
>gi|348577751|ref|XP_003474647.1| PREDICTED: nucleolin-like isoform 2 [Cavia porcellus]
Length = 714
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
LY+SNL T + ++E+F + +K + ++NG+ G A + +A DA AL N
Sbjct: 492 LYLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKEALNSCN 548
Query: 161 NVLLDGKPMKIEVVG 175
++G+ +++E+ G
Sbjct: 549 KREIEGRTIRLELQG 563
>gi|348577749|ref|XP_003474646.1| PREDICTED: nucleolin-like isoform 1 [Cavia porcellus]
Length = 713
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
LY+SNL T + ++E+F + +K + ++NG+ G A + +A DA AL N
Sbjct: 491 LYLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKEALNSCN 547
Query: 161 NVLLDGKPMKIEVVG 175
++G+ +++E+ G
Sbjct: 548 KREIEGRTIRLELQG 562
>gi|348564374|ref|XP_003467980.1| PREDICTED: transformer-2 protein homolog alpha-like [Cavia
porcellus]
Length = 393
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAALK 157
T L V L T D+RE+FS G L + +D + GR G A V + R D+ A++
Sbjct: 124 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAME 183
Query: 158 RYNNVLLDGKPMKIEVVGT 176
R N + LDG+ ++++ T
Sbjct: 184 RANGMELDGRRIRVDYSIT 202
>gi|47225694|emb|CAG08037.1| unnamed protein product [Tetraodon nigroviridis]
Length = 623
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRS 150
G+ +G ++V+NL V ++E+F G + R I DK+G+ G V +
Sbjct: 116 GLQAGRIGNTVFVANLDYKVGWKKLKEVFGMAGIVIRTDILEDKDGKSRGMGTVTFDSPL 175
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
+A A+ +N LL + M +++
Sbjct: 176 EAVQAVSMFNGQLLFNRVMHVKL 198
>gi|124268989|ref|YP_001022993.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
gi|124261764|gb|ABM96758.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
Length = 162
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAA 155
+G KLYV NL V +DD+++ F E G + + D++ GR G V ++A AA
Sbjct: 1 MGNKLYVGNLAYSVRDDDLQQAFGEFGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQAA 60
Query: 156 LKRYNNVLLDGKPMKI 171
++ N L G+ + +
Sbjct: 61 IEGMNGQSLSGRAIVV 76
>gi|389741761|gb|EIM82949.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 145
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAA 155
+ K+YV NL T+D +R+ FSE G + + D + GR G V + +A AA
Sbjct: 1 MSAKVYVGNLSWNTTDDTLRQAFSEFGAILDSIVMRDRETGRSRGFGFVTFGTPEEADAA 60
Query: 156 LKRYNNVLLDGKPMKIEV 173
+ N LDG+ +++ +
Sbjct: 61 INNLNEQELDGRRIRVNL 78
>gi|384245484|gb|EIE18978.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 339
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRSDAFAALKRY 159
+YV NL T+ I EL S+ G ++++ DK NG+ G V + A+ +
Sbjct: 132 VYVGNLQWWTTDAQIEELCSQFGSVQKFRFFEDKANGKSKGYVLVTFDSPKAAYTCKEGL 191
Query: 160 NNVLLDGK 167
+ ++DGK
Sbjct: 192 DGTMVDGK 199
>gi|347839748|emb|CCD54320.1| hypothetical protein [Botryotinia fuckeliana]
Length = 532
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 66/163 (40%), Gaps = 38/163 (23%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GT YV N++ V +D++R + S GEL ++FD N R A V YA S AA +
Sbjct: 397 GTLGYVRNVNASVKDDELRSILSSFGEL----VYFDIN-RAKNCAFVEYANASGYQAAAQ 451
Query: 158 RYNNVLLDGKPMKI--EVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAIN 215
P KI E + V RR + + GG +N
Sbjct: 452 --------ANPHKIGEETIY---------------VEPRRPKASAYGGNGYSGGGRGGLN 488
Query: 216 ---RGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRG 255
RG QGR G +Q RG G RGRG G GGRG
Sbjct: 489 QRGRGGFEQGRPG-----NQSRGNFGGANRGRGNANGPRGGRG 526
>gi|154312782|ref|XP_001555718.1| hypothetical protein BC1G_05092 [Botryotinia fuckeliana B05.10]
Length = 532
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 66/163 (40%), Gaps = 38/163 (23%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALK 157
GT YV N++ V +D++R + S GEL ++FD N R A V YA S AA +
Sbjct: 397 GTLGYVRNVNASVKDDELRSILSSFGEL----VYFDIN-RAKNCAFVEYANASGYQAAAQ 451
Query: 158 RYNNVLLDGKPMKI--EVVGTNAEIPLQARVNVTGVNGRRKRTVVMTSGSGNAGGAAAIN 215
P KI E + V RR + + GG +N
Sbjct: 452 --------ANPHKIGEETIY---------------VEPRRPKASAYGGNGYSGGGRGGLN 488
Query: 216 ---RGPGSQGRRGGLRRSSQGRGRGQGQGRGRGRGGGGGGGRG 255
RG QGR G +Q RG G RGRG G GGRG
Sbjct: 489 QRGRGGFEQGRPG-----NQSRGNFGGANRGRGNANGPRGGRG 526
>gi|221069836|ref|ZP_03545941.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|220714859|gb|EED70227.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
Length = 158
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAA 155
+G KLYV NL GV ++D+ + F + G + + +++ GR G V A ++A AA
Sbjct: 1 MGNKLYVGNLPYGVRDNDLEQAFGQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAA 60
Query: 156 LKRYNNVLLDGKPMKIEVVGTNAEIPLQARVNVTG 190
++ N L G+ + + N P++ R TG
Sbjct: 61 IQGMNGQPLGGRSLVV-----NEARPMEPRPPRTG 90
>gi|410921714|ref|XP_003974328.1| PREDICTED: nucleolin-like isoform 2 [Takifugu rubripes]
Length = 672
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 84 EDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAE 143
E S + A +SG T L V+NL T D ++ F + ++ ++GRP G A
Sbjct: 409 EKSQKGAKVSGAASKT-LIVNNLAFSATEDVLQSTFEKATSIRIPQ----RDGRPKGFAF 463
Query: 144 VVYARRSDAFAALKRYNNVLLDGKPMKIE 172
V + +DA AL+ +NN ++G+ +++E
Sbjct: 464 VEFETVNDATDALENFNNTDIEGRSIRLE 492
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAALKRY 159
L+V NL G+ +D + E FSE GE+K + D ++GRP G V ++ A A
Sbjct: 435 LFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAHAAM 494
Query: 160 NNVLLDGKPMKIE 172
V LDG+ ++++
Sbjct: 495 QGVELDGRSVRLD 507
>gi|410921712|ref|XP_003974327.1| PREDICTED: nucleolin-like isoform 1 [Takifugu rubripes]
Length = 680
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 84 EDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAE 143
E S + A +SG T L V+NL T D ++ F + ++ ++GRP G A
Sbjct: 423 EKSQKGAKVSGAASKT-LIVNNLAFSATEDVLQSTFEKATSIRIPQ----RDGRPKGFAF 477
Query: 144 VVYARRSDAFAALKRYNNVLLDGKPMKIE 172
V + +DA AL+ +NN ++G+ +++E
Sbjct: 478 VEFETVNDATDALENFNNTDIEGRSIRLE 506
>gi|375103924|ref|ZP_09750185.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374664655|gb|EHR69440.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 129
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAA 155
+G KLYV NL VT+ +++ F+E G + + D++ GR G V +A AA
Sbjct: 1 MGNKLYVGNLAYSVTDASLQQQFAECGTVTSAKVMMDRDSGRSKGFGFVEMGSHEEAQAA 60
Query: 156 LKRYNNVLLDGKPMKI 171
+++ + +DG+ + +
Sbjct: 61 IRKLHGASVDGRALVV 76
>gi|2815290|emb|CAA05719.1| P23 protein [Chironomus tentans]
gi|3954793|emb|CAA06034.1| hnRNP protein [Chironomus tentans]
Length = 191
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAA 155
E GT++YV NL V + + E F+ G+L + + P G A + +A + +A +A
Sbjct: 4 ERGTRVYVGNLTDKVKKEQLEEEFTRFGKLNSVWLAHN----PPGFAFIEFANKDEAISA 59
Query: 156 LKRYNNVLLDGKPMKIEV 173
N L G +++E+
Sbjct: 60 CDSLNGQELLGSKLRVEI 77
>gi|78211572|ref|YP_380351.1| RNA recognition motif-containing protein [Synechococcus sp. CC9605]
gi|78196031|gb|ABB33796.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus sp.
CC9605]
Length = 173
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAALKRY 159
++V NL +D+ ELF++ GE+ A+ +++ GR G A + A S AA++
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGL 62
Query: 160 NNVLLDGKPMKI 171
L G+P++I
Sbjct: 63 QGAELMGRPLRI 74
>gi|324501089|gb|ADY40490.1| Heterogeneous nuclear ribonucleoprotein Q [Ascaris suum]
Length = 418
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 24/106 (22%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTK---LYVSNLHPGVTNDDIRELFSEIGE------LKRY 128
W DL D E K LYV NL VT + ++E+FS GE +K Y
Sbjct: 93 WNLDLVVDWAEQQEEPDEETMAKVKVLYVRNLKEAVTEEQLKEMFSAHGEVDHVKKIKDY 152
Query: 129 A-IHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEV 173
A IHF++ R A A++ N +L+G P++I +
Sbjct: 153 AFIHFNE--------------REPAVKAMEALNGTVLEGVPIEISL 184
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAALKRY 159
L++ NL TN+ I+E+F+E G + R ++ D++ G G V + + +A AAL+
Sbjct: 337 LFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAALEAL 396
Query: 160 NNVLLDGKPMKIEVVG 175
+ + G+P++++
Sbjct: 397 HGQDVAGRPLRVDFAA 412
>gi|410921570|ref|XP_003974256.1| PREDICTED: heterogeneous nuclear ribonucleoprotein M-like [Takifugu
rubripes]
Length = 690
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRS 150
G+ +G ++V+NL V ++E+F G + R I DK+G+ G V +
Sbjct: 214 GLQAGRIGNTVFVANLDYKVGWKKLKEVFIMAGLVVRTDILEDKDGKSRGMGTVTFDSPL 273
Query: 151 DAFAALKRYNNVLLDGKPMKIEV 173
+A A+ +N LL + M +++
Sbjct: 274 EAVQAVSMFNGQLLFNRVMHVKL 296
>gi|367038789|ref|XP_003649775.1| hypothetical protein THITE_2108702 [Thielavia terrestris NRRL 8126]
gi|346997036|gb|AEO63439.1| hypothetical protein THITE_2108702 [Thielavia terrestris NRRL 8126]
Length = 325
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSD 151
S + G+ L+V+ +HP + +I LF + GE+++ I D + G G V
Sbjct: 65 SAVNPGSNLFVTGIHPRIEESEITRLFEKYGEVEKCQIMRDPHSGESRGFGFVKMMTSEQ 124
Query: 152 AFAALKRYNNVLLDGKPMKIE 172
A AA++ +++G+ + IE
Sbjct: 125 ADAAMEGLRGEIIEGRTLNIE 145
>gi|392896831|ref|NP_001255142.1| Protein RSP-8, isoform a [Caenorhabditis elegans]
gi|3874499|emb|CAB07322.1| Protein RSP-8, isoform a [Caenorhabditis elegans]
Length = 309
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAE----VVYARRSDAFAALKR 158
V NL T D+R++F E GE+ + + +D RPSG++ + + DA AA +
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYD---RPSGNSRGFGFIYFNLIEDATAARDK 136
Query: 159 YNNVLLDGKPMKIEVVGT 176
N LDG ++++ T
Sbjct: 137 LCNTDLDGHKIRVDFSLT 154
>gi|116180414|ref|XP_001220056.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
gi|88185132|gb|EAQ92600.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
Length = 475
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRSDAFAALKRY 159
L+V NL + F+E+ +++ I D+ +GRP G A V ++ DA +
Sbjct: 328 LFVGNLPFSADESSVSNYFNEVAQVQSLRIPTDQESGRPKGFAYVTFSSIDDAKKVFEAL 387
Query: 160 NNVLLDGKPMKIE 172
N LDG+P++++
Sbjct: 388 NGGDLDGRPVRLD 400
>gi|443922696|gb|ELU42100.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 285
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSG------SAEVV 145
I G GT + V L PG T+ D++E+F + GE+ H + P G + +
Sbjct: 121 IRGASTGTTIEVRELVPGTTSADVKEIFQQHGEILS---HKEVKPLPQGHTPDSVTVRLK 177
Query: 146 YARRSDAFAALKRYNNVLLDGKPMKIEVV 174
+A + A A + YN DG+ + +++
Sbjct: 178 FATQKSAEAVVAAYNGQKADGRVLSVKIC 206
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAALKRY 159
L++ NL TN+ I+E+F+E G + R ++ D++ G G V + + +A AAL+
Sbjct: 350 LFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAALEAL 409
Query: 160 NNVLLDGKPMKIEVVG 175
+ G+P++++
Sbjct: 410 QGQDVAGRPLRVDFAA 425
>gi|448105136|ref|XP_004200421.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|448108271|ref|XP_004201052.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359381843|emb|CCE80680.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359382608|emb|CCE79915.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
Length = 184
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRSDAFAALKRY 159
+Y+ N+ T + + FS +G +KR I FDK +G P G A V + A A++
Sbjct: 53 IYIGNVDYQSTPEQLENFFSTVGAVKRVTILFDKFSGFPKGYAYVEFEEYESAQKAIEEL 112
Query: 160 NNVLLDGKPMKIEVVGTNAEIP 181
N G+ +++ TN IP
Sbjct: 113 NGSPFRGRELRVMTKRTN--IP 132
>gi|260435624|ref|ZP_05789594.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
gi|260413498|gb|EEX06794.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
Length = 190
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAALKRY 159
++V NL +D+ ELF++ GE+ A+ +++ GR G A + A S AA++
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGL 62
Query: 160 NNVLLDGKPMKI 171
L G+P++I
Sbjct: 63 QGAELMGRPLRI 74
>gi|41055454|ref|NP_956710.1| transformer-2 protein homolog alpha [Danio rerio]
gi|32451924|gb|AAH54632.1| Transformer-2 alpha [Danio rerio]
Length = 297
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 78 WQHDLFEDSLRAAGI-SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-N 135
+ HD +DS + + T L V L T D+RE+FS G L + +D+
Sbjct: 113 YSHDSKKDSHNQGDARANPDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRT 172
Query: 136 GRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGT 176
GR G A V + DA A++R N + LDG+ ++++ T
Sbjct: 173 GRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSIT 213
>gi|405959794|gb|EKC25786.1| Leucine-zipper-like transcriptional regulator 1 [Crassostrea gigas]
Length = 1621
Score = 38.1 bits (87), Expect = 4.1, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELK--------RYAIHFDKN-GRPSGSAEVV 145
+E+ ++VS L + D + + F IG +K + I+ DKN GRP G A +
Sbjct: 1365 MEMVDTIFVSGLPEDIDEDGLVQHFGSIGVIKTDKRTGKPKVWIYKDKNTGRPKGEATIT 1424
Query: 146 YARRSDAFAALKRYNNVLLDGKPMKIEV 173
Y A AA+ +N G +K+E+
Sbjct: 1425 YDDCETAKAAINWFNEKDFGGNTIKVEI 1452
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSGSAEVVYARRSDAFAALKRY 159
+++ NL T DD+R FS GE++ + D N GRP G V + DA
Sbjct: 312 VFIGNLSFNATEDDVRNAFSSCGEIQSVRLPTDMNSGRPKGFGYVTF-DSIDAAKQCVEM 370
Query: 160 NNVLLDGKPMKIEV 173
N + G+P +++
Sbjct: 371 NGHFIAGRPCRLDF 384
>gi|342320561|gb|EGU12501.1| Polyadenylate-binding protein 2 [Rhodotorula glutinis ATCC 204091]
Length = 238
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
+YV N+ T ++I++ F+ G + R I FDK P G A V +A S AL N
Sbjct: 117 IYVGNVDYHATPEEIQQHFASCGTINRVTILFDKYTGPKGYAYVEFAEPSLVQNAL-HLN 175
Query: 161 NVLLDGKPMKIEVVGTN 177
+L G+ +K+ TN
Sbjct: 176 ESVLRGRQIKVSEKRTN 192
>gi|187282153|ref|NP_001119768.1| transformer-2 protein homolog alpha [Rattus norvegicus]
gi|149033412|gb|EDL88213.1| similar to RIKEN cDNA G430041M01 (predicted) [Rattus norvegicus]
Length = 235
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAALK 157
T L V L T D+RE+FS G L + +D + GR G A V + R D+ A++
Sbjct: 117 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAME 176
Query: 158 RYNNVLLDGKPMKIEVVGT 176
R N + LDG+ ++++ T
Sbjct: 177 RANGMELDGRRIRVDYSIT 195
>gi|72390421|ref|XP_845505.1| RNA-binding protein RBP14 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360364|gb|AAX80780.1| RNA-binding protein RBP14, putative [Trypanosoma brucei]
gi|70802040|gb|AAZ11946.1| RNA-binding protein RBP14, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261328909|emb|CBH11887.1| RNA-binding protein RBP14, putative [Trypanosoma brucei gambiense
DAL972]
Length = 214
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRSDAFAALK 157
T ++V + P T D+R FS G +KR + DK G+ G+A + + A AA+
Sbjct: 64 TSVFVGGMDPRTTESDLRVFFSACGTIKRLTMLRDKFTGQQKGTAYIEFETVEQAAAAIV 123
Query: 158 RYNNVLLDGKPMKI 171
+ N L GKP+ +
Sbjct: 124 K-NGQSLHGKPLTV 136
>gi|334349137|ref|XP_001369711.2| PREDICTED: transformer-2 protein homolog alpha-like [Monodelphis
domestica]
Length = 418
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRSDAFAALK 157
T L V L T D+RE+FS G L + +D+ GR G A V + R D+ A++
Sbjct: 160 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAME 219
Query: 158 RYNNVLLDGKPMKIEVVGT 176
R N + LDG+ ++++ T
Sbjct: 220 RANGMELDGRRIRVDYSIT 238
>gi|162455692|ref|YP_001618059.1| RNA recognition motif-containing protein [Sorangium cellulosum So
ce56]
gi|161166274|emb|CAN97579.1| RNA-binding region RNP-1 (RNA recognition motif) [Sorangium
cellulosum So ce56]
Length = 139
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAA 155
+GT+LYV NL T ++ F++ GE+ I D ++G+ G V A A
Sbjct: 1 MGTRLYVGNLPFSATKASVQAAFAQSGEVTDVHIVTDRESGQSRGFGFVTMGTPEQAQQA 60
Query: 156 LKRYNNVLLDGKPMKI 171
++ N ++DG+P+++
Sbjct: 61 IENMNGAMMDGRPLRV 76
>gi|148235297|ref|NP_001085979.1| MGC82977 protein [Xenopus laevis]
gi|49118619|gb|AAH73641.1| MGC82977 protein [Xenopus laevis]
Length = 276
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 110 VTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKP 168
T D+RE+FS G L + +D+ GR G A V + R D+ A++ N + LDG+
Sbjct: 123 TTERDLREVFSRYGPLSSVNVVYDQRTGRSRGFAFVYFERMEDSREAMEHVNGMELDGRK 182
Query: 169 MKIEVVGT 176
++++ T
Sbjct: 183 LRVDYSIT 190
>gi|345329358|ref|XP_001513669.2| PREDICTED: transformer-2 protein homolog alpha-like
[Ornithorhynchus anatinus]
Length = 284
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAALK 157
T L V L T D+RE+FS G L + +D + GR G A V + R D+ A++
Sbjct: 121 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAME 180
Query: 158 RYNNVLLDGKPMKIEV-VGTNAEIP 181
R N + LDG+ ++++ + A P
Sbjct: 181 RANGMELDGRRIRVDYSITKRAHTP 205
>gi|395540434|ref|XP_003772160.1| PREDICTED: transformer-2 protein homolog alpha [Sarcophilus
harrisii]
Length = 272
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAALK 157
T L V L T D+RE+FS G L + +D + GR G A V + R D+ A++
Sbjct: 109 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAME 168
Query: 158 RYNNVLLDGKPMKIEV-VGTNAEIP 181
R N + LDG+ ++++ + A P
Sbjct: 169 RANGMELDGRRIRVDYSITKRAHTP 193
>gi|353241024|emb|CCA72864.1| related to SNP1-U1 small nuclear ribonucleoprotein [Piriformospora
indica DSM 11827]
Length = 362
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYN 160
L+V+ L T +D+R F G + R I +KNG G A +VY R D A K
Sbjct: 121 LFVARLPKKATENDLRREFEMFGVIARIKIVKNKNGNSRGYAFIVYERERDMKVAYKEGE 180
Query: 161 NVLLDGKPMKIEV 173
++ L GK + ++V
Sbjct: 181 HMQLLGKRILVDV 193
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 14/148 (9%)
Query: 27 RARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFED- 85
R RGRG+ G +TG + L + +++ + F + FP + +
Sbjct: 3 REFRGRGKKMG---------LTGVSGWFTLRSQLSTTFGLVGLF--WKRFPVKRARMREA 51
Query: 86 -SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSGSAE 143
L G+ GI + T +YV NL T +++R F + GE+ I D+ GR G A
Sbjct: 52 SCLVGDGLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAF 111
Query: 144 VVYARRSDAFAALKRYNNVLLDGKPMKI 171
V A A A++ N +DG+ + +
Sbjct: 112 VEMADAEGAKDAIENLNGHEIDGRSVTV 139
>gi|355725835|gb|AES08679.1| transformer 2 alpha-like protein [Mustela putorius furo]
Length = 267
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSGSAEVVYARRSDAFAALK 157
T L V L T D+RE+FS G L + +D + GR G A V + R D+ A++
Sbjct: 106 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAME 165
Query: 158 RYNNVLLDGKPMKIEV-VGTNAEIP 181
R N + LDG+ ++++ + A P
Sbjct: 166 RANGMELDGRRIRVDYSITKRAHTP 190
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.136 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,133,128,840
Number of Sequences: 23463169
Number of extensions: 272719536
Number of successful extensions: 4246087
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 20757
Number of HSP's successfully gapped in prelim test: 21204
Number of HSP's that attempted gapping in prelim test: 2563056
Number of HSP's gapped (non-prelim): 897153
length of query: 291
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 150
effective length of database: 9,050,888,538
effective search space: 1357633280700
effective search space used: 1357633280700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 76 (33.9 bits)