Query 022836
Match_columns 291
No_of_seqs 321 out of 3427
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 11:57:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022836.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022836hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hem_A Cyclopropane-fatty-acyl 100.0 2.4E-39 8.1E-44 282.6 29.7 267 6-288 15-302 (302)
2 1kpg_A CFA synthase;, cyclopro 100.0 7.2E-37 2.5E-41 264.8 29.3 269 5-288 6-287 (287)
3 2fk8_A Methoxy mycolic acid sy 100.0 1.2E-34 4.3E-39 254.4 26.5 268 7-289 34-314 (318)
4 3bus_A REBM, methyltransferase 100.0 6.7E-31 2.3E-35 225.6 24.9 265 1-289 1-273 (273)
5 2o57_A Putative sarcosine dime 100.0 1.8E-26 6E-31 200.5 28.8 261 7-290 19-295 (297)
6 3ujc_A Phosphoethanolamine N-m 99.9 1.7E-23 5.7E-28 178.3 20.6 220 49-289 41-266 (266)
7 3vc1_A Geranyl diphosphate 2-C 99.9 1.7E-22 5.8E-27 176.7 17.3 211 12-236 68-284 (312)
8 3kkz_A Uncharacterized protein 99.9 4.9E-20 1.7E-24 157.4 23.7 176 52-235 34-218 (267)
9 1nkv_A Hypothetical protein YJ 99.9 3E-20 1E-24 157.4 22.0 123 49-172 22-145 (256)
10 3f4k_A Putative methyltransfer 99.8 4.2E-19 1.4E-23 150.5 21.6 118 51-170 33-153 (257)
11 3mgg_A Methyltransferase; NYSG 99.8 4.1E-20 1.4E-24 158.5 14.2 137 35-171 9-146 (276)
12 1vl5_A Unknown conserved prote 99.8 3.1E-20 1.1E-24 157.9 13.0 122 49-172 23-145 (260)
13 4gek_A TRNA (CMO5U34)-methyltr 99.8 9E-20 3.1E-24 155.2 15.5 110 61-171 68-182 (261)
14 1pjz_A Thiopurine S-methyltran 99.8 2.2E-19 7.6E-24 147.2 15.6 116 52-169 11-142 (203)
15 3g5l_A Putative S-adenosylmeth 99.8 5.5E-21 1.9E-25 161.9 5.8 186 52-250 33-220 (253)
16 3fpf_A Mtnas, putative unchara 99.8 6.4E-20 2.2E-24 156.9 12.3 155 9-168 67-223 (298)
17 3dh0_A SAM dependent methyltra 99.8 2.5E-19 8.6E-24 148.2 14.2 120 53-172 27-148 (219)
18 3iv6_A Putative Zn-dependent a 99.8 2E-19 6.9E-24 152.3 13.3 147 52-207 34-210 (261)
19 1xxl_A YCGJ protein; structura 99.8 4.7E-19 1.6E-23 148.8 14.8 120 50-171 8-128 (239)
20 3dlc_A Putative S-adenosyl-L-m 99.8 4.7E-19 1.6E-23 146.2 14.3 117 50-168 31-149 (219)
21 4htf_A S-adenosylmethionine-de 99.8 2.3E-19 7.8E-24 154.7 12.3 117 52-171 58-177 (285)
22 1dl5_A Protein-L-isoaspartate 99.8 6.2E-20 2.1E-24 160.7 8.9 204 25-239 30-246 (317)
23 3jwh_A HEN1; methyltransferase 99.8 9.8E-19 3.4E-23 144.6 14.5 116 52-167 18-141 (217)
24 3dtn_A Putative methyltransfer 99.8 1E-18 3.6E-23 146.0 14.0 118 53-172 33-153 (234)
25 3jwg_A HEN1, methyltransferase 99.8 9.2E-19 3.2E-23 144.9 13.6 119 50-169 16-142 (219)
26 3gu3_A Methyltransferase; alph 99.8 1.1E-18 3.8E-23 150.4 14.2 119 50-169 8-128 (284)
27 2xvm_A Tellurite resistance pr 99.8 2.6E-18 8.8E-23 139.8 15.5 113 55-169 24-138 (199)
28 3hnr_A Probable methyltransfer 99.8 6.6E-19 2.2E-23 145.8 12.0 111 55-171 37-149 (220)
29 3ou2_A SAM-dependent methyltra 99.8 2.4E-18 8.2E-23 142.0 14.9 111 54-170 36-149 (218)
30 2p35_A Trans-aconitate 2-methy 99.8 9.7E-19 3.3E-23 148.3 12.6 117 50-171 20-136 (259)
31 3h2b_A SAM-dependent methyltra 99.8 2.6E-18 8.8E-23 140.5 14.4 141 9-172 3-146 (203)
32 3e05_A Precorrin-6Y C5,15-meth 99.8 9E-18 3.1E-22 137.5 17.3 117 51-170 28-145 (204)
33 2gb4_A Thiopurine S-methyltran 99.8 1E-17 3.5E-22 141.8 17.8 107 61-169 66-193 (252)
34 3dli_A Methyltransferase; PSI- 99.8 2.1E-18 7.1E-23 144.9 13.0 163 61-243 39-219 (240)
35 4fsd_A Arsenic methyltransfera 99.8 1.3E-18 4.3E-23 156.3 12.4 111 61-171 81-207 (383)
36 3bkx_A SAM-dependent methyltra 99.8 4.8E-18 1.7E-22 145.4 15.1 131 42-172 22-164 (275)
37 3ofk_A Nodulation protein S; N 99.8 2.1E-18 7E-23 142.5 12.3 112 55-170 43-157 (216)
38 3dxy_A TRNA (guanine-N(7)-)-me 99.8 2.4E-18 8E-23 142.6 11.9 107 63-169 34-152 (218)
39 1y8c_A S-adenosylmethionine-de 99.8 3E-18 1E-22 143.9 12.5 106 62-170 36-145 (246)
40 3g5t_A Trans-aconitate 3-methy 99.8 1.6E-17 5.6E-22 144.0 17.4 109 61-170 34-152 (299)
41 3p9n_A Possible methyltransfer 99.8 1.2E-17 4.1E-22 135.1 15.5 110 62-172 43-158 (189)
42 2p7i_A Hypothetical protein; p 99.8 1.9E-18 6.7E-23 145.2 11.1 105 62-172 41-146 (250)
43 4hg2_A Methyltransferase type 99.8 1.6E-18 5.6E-23 147.0 10.1 110 51-171 29-139 (257)
44 3ccf_A Cyclopropane-fatty-acyl 99.8 4.5E-18 1.6E-22 146.1 13.1 113 53-172 47-159 (279)
45 3hm2_A Precorrin-6Y C5,15-meth 99.8 1E-17 3.5E-22 133.8 13.5 115 51-170 13-130 (178)
46 3m70_A Tellurite resistance pr 99.8 1.2E-17 4E-22 144.0 14.4 106 62-170 119-226 (286)
47 3i9f_A Putative type 11 methyl 99.8 9.3E-18 3.2E-22 133.3 12.5 108 55-172 9-117 (170)
48 3lcc_A Putative methyl chlorid 99.8 4E-18 1.4E-22 142.7 10.8 116 52-170 56-174 (235)
49 3thr_A Glycine N-methyltransfe 99.7 8.3E-18 2.8E-22 145.3 13.0 113 56-170 50-178 (293)
50 2yqz_A Hypothetical protein TT 99.7 1.2E-17 4.1E-22 141.8 13.7 104 60-166 36-140 (263)
51 1zx0_A Guanidinoacetate N-meth 99.7 7.3E-19 2.5E-23 147.4 5.9 157 9-168 4-171 (236)
52 1xtp_A LMAJ004091AAA; SGPP, st 99.7 8.5E-18 2.9E-22 142.1 12.6 122 45-169 75-199 (254)
53 1ve3_A Hypothetical protein PH 99.7 2.1E-17 7.2E-22 137.2 14.8 120 46-170 23-145 (227)
54 2ex4_A Adrenal gland protein A 99.7 2.5E-18 8.5E-23 144.5 8.9 107 63-170 79-188 (241)
55 1dus_A MJ0882; hypothetical pr 99.7 2.8E-17 9.7E-22 132.8 14.7 117 52-170 41-160 (194)
56 3e23_A Uncharacterized protein 99.7 8.7E-18 3E-22 138.2 11.7 109 52-170 34-144 (211)
57 3ege_A Putative methyltransfer 99.7 6.9E-18 2.4E-22 143.6 11.0 114 50-172 21-135 (261)
58 1wzn_A SAM-dependent methyltra 99.7 4E-17 1.4E-21 137.9 15.6 118 49-169 27-147 (252)
59 1ri5_A MRNA capping enzyme; me 99.7 3E-17 1E-21 141.9 14.9 109 61-170 62-177 (298)
60 3lbf_A Protein-L-isoaspartate 99.7 2.8E-17 9.7E-22 135.1 13.8 112 50-169 64-176 (210)
61 3l8d_A Methyltransferase; stru 99.7 2.1E-17 7.3E-22 138.6 13.3 106 62-172 52-158 (242)
62 3njr_A Precorrin-6Y methylase; 99.7 6.3E-17 2.2E-21 132.7 15.8 111 53-170 45-157 (204)
63 2gs9_A Hypothetical protein TT 99.7 2.3E-17 7.9E-22 135.6 13.1 108 53-171 27-136 (211)
64 3ocj_A Putative exported prote 99.7 7.2E-18 2.5E-22 146.8 9.8 113 60-172 115-232 (305)
65 2p8j_A S-adenosylmethionine-de 99.7 2.4E-17 8.3E-22 135.2 12.5 110 61-172 21-133 (209)
66 3mti_A RRNA methylase; SAM-dep 99.7 3.4E-17 1.2E-21 131.9 13.1 108 60-169 19-137 (185)
67 3bkw_A MLL3908 protein, S-aden 99.7 2.1E-17 7.1E-22 138.7 12.3 112 54-170 34-147 (243)
68 1yzh_A TRNA (guanine-N(7)-)-me 99.7 5.9E-17 2E-21 133.7 14.5 107 62-168 40-157 (214)
69 2aot_A HMT, histamine N-methyl 99.7 2E-17 6.8E-22 143.1 12.1 118 53-170 41-175 (292)
70 3fzg_A 16S rRNA methylase; met 99.7 5.5E-18 1.9E-22 134.8 7.6 113 49-165 37-150 (200)
71 3g07_A 7SK snRNA methylphospha 99.7 1.3E-17 4.6E-22 144.2 10.5 106 63-168 46-221 (292)
72 3e8s_A Putative SAM dependent 99.7 7.7E-18 2.6E-22 139.6 8.4 201 4-248 6-211 (227)
73 3gwz_A MMCR; methyltransferase 99.7 2.5E-16 8.5E-21 140.7 18.5 119 51-171 190-311 (369)
74 3sm3_A SAM-dependent methyltra 99.7 3.5E-17 1.2E-21 136.4 12.2 108 62-171 29-145 (235)
75 2r3s_A Uncharacterized protein 99.7 1.6E-16 5.6E-21 139.8 16.9 119 52-171 152-275 (335)
76 2qe6_A Uncharacterized protein 99.7 1.2E-16 4E-21 136.9 15.2 150 19-170 24-199 (274)
77 2fca_A TRNA (guanine-N(7)-)-me 99.7 5.8E-17 2E-21 133.8 12.8 107 62-168 37-154 (213)
78 3g2m_A PCZA361.24; SAM-depende 99.7 3E-17 1E-21 142.4 11.6 119 51-172 71-195 (299)
79 3d2l_A SAM-dependent methyltra 99.7 1.6E-16 5.5E-21 133.2 15.5 134 14-170 3-140 (243)
80 2kw5_A SLR1183 protein; struct 99.7 3.5E-17 1.2E-21 133.6 11.1 107 62-172 29-136 (202)
81 3i53_A O-methyltransferase; CO 99.7 9.2E-17 3.1E-21 141.4 14.6 114 55-170 161-277 (332)
82 3mcz_A O-methyltransferase; ad 99.7 1.7E-16 5.7E-21 140.8 15.9 117 54-171 169-291 (352)
83 2vdw_A Vaccinia virus capping 99.7 1.6E-16 5.6E-21 137.9 15.0 109 63-172 48-174 (302)
84 2b3t_A Protein methyltransfera 99.7 1.8E-16 6.1E-21 136.0 15.0 118 49-167 96-238 (276)
85 3pfg_A N-methyltransferase; N, 99.7 9.9E-17 3.4E-21 136.4 13.3 112 49-169 38-153 (263)
86 3mq2_A 16S rRNA methyltransfer 99.7 1.5E-17 5.1E-22 137.6 7.8 111 57-168 21-141 (218)
87 1xdz_A Methyltransferase GIDB; 99.7 7.8E-17 2.7E-21 135.4 12.2 101 62-166 69-173 (240)
88 2ift_A Putative methylase HI07 99.7 4E-17 1.4E-21 133.5 9.9 107 63-171 53-167 (201)
89 3evz_A Methyltransferase; NYSG 99.7 7E-16 2.4E-20 128.5 17.6 108 60-169 52-181 (230)
90 3gdh_A Trimethylguanosine synt 99.7 1.6E-18 5.5E-23 145.7 1.4 103 63-167 78-181 (241)
91 3bgv_A MRNA CAP guanine-N7 met 99.7 1.3E-16 4.5E-21 139.2 13.5 108 62-170 33-158 (313)
92 2a14_A Indolethylamine N-methy 99.7 2.5E-17 8.5E-22 140.4 8.6 107 60-168 52-198 (263)
93 1x19_A CRTF-related protein; m 99.7 5.1E-16 1.7E-20 138.1 17.2 119 51-171 178-299 (359)
94 2yxe_A Protein-L-isoaspartate 99.7 1.6E-16 5.6E-21 131.0 13.0 115 50-170 64-180 (215)
95 1jsx_A Glucose-inhibited divis 99.7 1.3E-16 4.4E-21 130.7 12.2 101 63-167 65-165 (207)
96 2esr_A Methyltransferase; stru 99.7 7.3E-17 2.5E-21 129.0 10.4 121 51-173 18-144 (177)
97 2fhp_A Methylase, putative; al 99.7 1.7E-16 5.8E-21 127.7 12.6 121 51-173 31-160 (187)
98 4dcm_A Ribosomal RNA large sub 99.7 2.2E-16 7.4E-21 141.0 14.3 116 54-169 213-336 (375)
99 3eey_A Putative rRNA methylase 99.7 1.3E-16 4.5E-21 129.7 11.8 110 60-169 19-141 (197)
100 3uwp_A Histone-lysine N-methyl 99.7 1.5E-16 5.3E-21 141.0 12.9 123 47-170 157-291 (438)
101 3g89_A Ribosomal RNA small sub 99.7 2.5E-16 8.5E-21 133.0 13.7 102 62-167 79-184 (249)
102 3orh_A Guanidinoacetate N-meth 99.7 2.1E-17 7.3E-22 138.5 6.8 113 51-166 49-169 (236)
103 3bxo_A N,N-dimethyltransferase 99.7 2.4E-16 8.2E-21 131.8 13.2 103 62-171 39-145 (239)
104 3lpm_A Putative methyltransfer 99.7 2E-16 6.9E-21 134.4 12.6 111 57-168 42-177 (259)
105 3dmg_A Probable ribosomal RNA 99.7 2.4E-16 8.2E-21 140.9 13.6 122 45-169 213-342 (381)
106 1ws6_A Methyltransferase; stru 99.7 9.9E-17 3.4E-21 127.1 10.0 106 63-173 41-153 (171)
107 2pxx_A Uncharacterized protein 99.7 4.1E-16 1.4E-20 128.1 13.9 107 62-171 41-163 (215)
108 1qzz_A RDMB, aclacinomycin-10- 99.7 4.1E-16 1.4E-20 139.4 14.9 114 53-168 172-288 (374)
109 3dp7_A SAM-dependent methyltra 99.7 3.5E-16 1.2E-20 139.4 14.3 109 62-171 178-291 (363)
110 4dzr_A Protein-(glutamine-N5) 99.7 2.4E-17 8.2E-22 135.5 6.3 118 49-167 15-164 (215)
111 3htx_A HEN1; HEN1, small RNA m 99.7 3.2E-16 1.1E-20 148.7 14.1 120 51-171 709-838 (950)
112 2fpo_A Methylase YHHF; structu 99.7 2E-16 6.7E-21 129.5 11.1 108 63-172 54-165 (202)
113 1nt2_A Fibrillarin-like PRE-rR 99.7 5.2E-16 1.8E-20 127.7 13.6 106 59-168 53-162 (210)
114 4e2x_A TCAB9; kijanose, tetron 99.7 2.8E-17 9.7E-22 149.1 6.6 123 42-170 86-211 (416)
115 2ip2_A Probable phenazine-spec 99.7 3.3E-16 1.1E-20 137.9 13.1 116 52-170 157-275 (334)
116 3mb5_A SAM-dependent methyltra 99.7 5.1E-16 1.7E-20 131.4 13.8 114 52-170 82-197 (255)
117 3dr5_A Putative O-methyltransf 99.7 4.4E-16 1.5E-20 129.2 13.1 121 45-168 38-164 (221)
118 1vbf_A 231AA long hypothetical 99.7 4.4E-16 1.5E-20 129.8 13.1 111 50-170 57-168 (231)
119 1yb2_A Hypothetical protein TA 99.7 2.7E-16 9.2E-21 134.8 12.0 113 53-170 100-214 (275)
120 2yxd_A Probable cobalt-precorr 99.7 9.5E-16 3.2E-20 122.6 14.4 112 50-170 22-134 (183)
121 3ggd_A SAM-dependent methyltra 99.7 2.8E-16 9.7E-21 132.1 11.6 106 61-171 54-167 (245)
122 3grz_A L11 mtase, ribosomal pr 99.7 3.4E-16 1.2E-20 128.1 11.7 105 61-170 58-162 (205)
123 3ntv_A MW1564 protein; rossman 99.7 3.4E-16 1.2E-20 130.9 11.7 104 62-168 70-177 (232)
124 2g72_A Phenylethanolamine N-me 99.7 5.6E-17 1.9E-21 140.0 7.0 105 62-167 70-215 (289)
125 1u2z_A Histone-lysine N-methyl 99.7 3.7E-16 1.3E-20 141.0 12.6 118 50-168 229-360 (433)
126 1o9g_A RRNA methyltransferase; 99.7 2E-16 6.9E-21 133.6 10.3 117 50-166 38-213 (250)
127 3tma_A Methyltransferase; thum 99.7 9.8E-16 3.3E-20 136.0 14.9 120 51-170 191-320 (354)
128 2ozv_A Hypothetical protein AT 99.7 3.7E-16 1.3E-20 132.9 11.6 113 57-169 30-172 (260)
129 2y1w_A Histone-arginine methyl 99.7 6.5E-16 2.2E-20 136.8 13.4 116 52-169 39-157 (348)
130 3ckk_A TRNA (guanine-N(7)-)-me 99.7 4.2E-16 1.4E-20 130.5 11.5 108 61-168 44-169 (235)
131 3u81_A Catechol O-methyltransf 99.7 2.8E-16 9.7E-21 130.3 10.3 108 62-170 57-173 (221)
132 1jg1_A PIMT;, protein-L-isoasp 99.7 4.8E-16 1.6E-20 130.1 11.7 115 50-171 78-193 (235)
133 2i62_A Nicotinamide N-methyltr 99.7 2.1E-16 7.3E-21 134.2 9.6 113 54-168 48-199 (265)
134 1tw3_A COMT, carminomycin 4-O- 99.7 1.2E-15 4.2E-20 135.6 14.8 115 53-169 173-290 (360)
135 2gpy_A O-methyltransferase; st 99.7 4.9E-16 1.7E-20 129.8 11.4 105 61-168 52-161 (233)
136 2avn_A Ubiquinone/menaquinone 99.7 7E-16 2.4E-20 131.0 12.6 100 63-170 54-155 (260)
137 1fbn_A MJ fibrillarin homologu 99.7 5.7E-16 1.9E-20 129.3 11.6 104 56-166 67-177 (230)
138 3r0q_C Probable protein argini 99.7 7.4E-16 2.5E-20 137.8 13.1 114 53-168 53-170 (376)
139 2pwy_A TRNA (adenine-N(1)-)-me 99.7 1.4E-15 4.8E-20 128.7 13.8 113 53-170 86-201 (258)
140 2pjd_A Ribosomal RNA small sub 99.7 5.2E-16 1.8E-20 137.2 11.4 115 53-169 186-305 (343)
141 1l3i_A Precorrin-6Y methyltran 99.7 1.3E-15 4.5E-20 122.7 12.9 114 51-169 21-136 (192)
142 2fyt_A Protein arginine N-meth 99.7 1.3E-15 4.5E-20 134.4 13.9 110 53-164 54-168 (340)
143 3p2e_A 16S rRNA methylase; met 99.6 1.9E-16 6.4E-21 131.8 7.4 106 62-167 23-139 (225)
144 3cgg_A SAM-dependent methyltra 99.6 1.8E-15 6.1E-20 122.2 13.0 102 61-169 44-149 (195)
145 2h00_A Methyltransferase 10 do 99.6 1.4E-16 4.8E-21 134.9 6.4 151 15-166 16-191 (254)
146 3giw_A Protein of unknown func 99.6 1.7E-15 5.8E-20 128.1 12.8 153 18-171 24-204 (277)
147 3cc8_A Putative methyltransfer 99.6 1.3E-15 4.4E-20 126.3 11.8 108 54-171 24-134 (230)
148 4df3_A Fibrillarin-like rRNA/T 99.6 1E-15 3.5E-20 127.0 11.0 108 57-168 71-183 (233)
149 2nxc_A L11 mtase, ribosomal pr 99.6 1.2E-15 3.9E-20 129.4 11.4 103 61-169 118-220 (254)
150 3duw_A OMT, O-methyltransferas 99.6 1.2E-15 3.9E-20 126.6 11.0 115 49-169 47-169 (223)
151 3tfw_A Putative O-methyltransf 99.6 1.5E-15 5.1E-20 128.2 11.9 106 62-170 62-173 (248)
152 3a27_A TYW2, uncharacterized p 99.6 2.1E-15 7.1E-20 129.1 12.7 107 60-170 116-222 (272)
153 3q7e_A Protein arginine N-meth 99.6 1.5E-15 5E-20 134.6 12.1 105 61-167 64-173 (349)
154 3lst_A CALO1 methyltransferase 99.6 1E-15 3.4E-20 135.7 10.9 115 52-171 173-290 (348)
155 2frn_A Hypothetical protein PH 99.6 1E-15 3.5E-20 131.4 10.6 105 61-170 123-228 (278)
156 3ajd_A Putative methyltransfer 99.6 1.7E-15 5.7E-20 129.8 11.7 113 58-170 78-214 (274)
157 3r3h_A O-methyltransferase, SA 99.6 7.6E-16 2.6E-20 129.5 9.2 119 47-171 47-174 (242)
158 1i9g_A Hypothetical protein RV 99.6 3.3E-15 1.1E-19 128.1 13.4 115 51-170 87-206 (280)
159 2pbf_A Protein-L-isoaspartate 99.6 3E-15 1E-19 124.4 12.6 104 60-169 77-195 (227)
160 2ipx_A RRNA 2'-O-methyltransfe 99.6 2.3E-15 7.8E-20 125.8 11.6 109 56-168 70-183 (233)
161 3b3j_A Histone-arginine methyl 99.6 1.8E-15 6E-20 139.1 11.7 114 52-167 147-263 (480)
162 2vdv_E TRNA (guanine-N(7)-)-me 99.6 4.3E-15 1.5E-19 125.2 13.1 106 62-167 48-173 (246)
163 3tr6_A O-methyltransferase; ce 99.6 1.3E-15 4.6E-20 126.3 9.7 115 49-169 53-176 (225)
164 1o54_A SAM-dependent O-methylt 99.6 4.5E-15 1.5E-19 127.3 13.2 112 53-169 102-215 (277)
165 1vlm_A SAM-dependent methyltra 99.6 3.4E-15 1.2E-19 123.5 11.9 94 64-170 48-142 (219)
166 2igt_A SAM dependent methyltra 99.6 3.5E-15 1.2E-19 131.0 12.4 107 62-170 152-275 (332)
167 1af7_A Chemotaxis receptor met 99.6 1.8E-15 6.2E-20 129.1 10.2 103 63-165 105-250 (274)
168 1nv8_A HEMK protein; class I a 99.6 4.4E-15 1.5E-19 127.8 12.4 116 51-168 111-250 (284)
169 1i1n_A Protein-L-isoaspartate 99.6 1.3E-14 4.3E-19 120.5 14.6 110 54-169 66-184 (226)
170 1fp1_D Isoliquiritigenin 2'-O- 99.6 4.9E-15 1.7E-19 132.4 12.7 111 52-171 197-310 (372)
171 3bzb_A Uncharacterized protein 99.6 1.2E-14 4.1E-19 124.9 14.4 118 49-167 65-205 (281)
172 1g8a_A Fibrillarin-like PRE-rR 99.6 6.6E-15 2.3E-19 122.4 12.2 106 56-166 66-177 (227)
173 1ixk_A Methyltransferase; open 99.6 6.5E-15 2.2E-19 128.6 12.7 115 56-170 111-249 (315)
174 1sui_A Caffeoyl-COA O-methyltr 99.6 1E-14 3.5E-19 123.0 13.4 116 47-168 66-191 (247)
175 1g6q_1 HnRNP arginine N-methyl 99.6 8E-15 2.7E-19 128.8 12.8 105 59-165 34-143 (328)
176 4hc4_A Protein arginine N-meth 99.6 5E-15 1.7E-19 131.4 11.5 103 62-166 82-188 (376)
177 2yvl_A TRMI protein, hypotheti 99.6 2.1E-14 7E-19 120.8 14.7 111 53-170 81-193 (248)
178 4a6d_A Hydroxyindole O-methylt 99.6 1.3E-14 4.4E-19 128.7 13.8 116 53-170 169-286 (353)
179 3c3p_A Methyltransferase; NP_9 99.6 9.3E-15 3.2E-19 120.1 12.0 113 49-168 45-161 (210)
180 3reo_A (ISO)eugenol O-methyltr 99.6 9.5E-15 3.2E-19 130.3 12.8 111 52-171 191-304 (368)
181 1r18_A Protein-L-isoaspartate( 99.6 8.5E-15 2.9E-19 121.8 11.6 112 52-169 71-196 (227)
182 1ej0_A FTSJ; methyltransferase 99.6 7.3E-15 2.5E-19 116.6 10.6 108 52-170 10-139 (180)
183 3q87_B N6 adenine specific DNA 99.6 4.9E-15 1.7E-19 117.8 9.1 96 62-170 22-126 (170)
184 3p9c_A Caffeic acid O-methyltr 99.6 1.6E-14 5.6E-19 128.6 13.3 111 52-171 189-302 (364)
185 2hnk_A SAM-dependent O-methylt 99.6 8.4E-15 2.9E-19 122.8 10.5 105 62-169 59-183 (239)
186 4azs_A Methyltransferase WBDD; 99.6 3.6E-15 1.2E-19 140.2 9.2 107 62-170 65-176 (569)
187 3id6_C Fibrillarin-like rRNA/T 99.6 3.6E-14 1.2E-18 118.0 13.7 105 59-168 72-182 (232)
188 2plw_A Ribosomal RNA methyltra 99.6 1.8E-14 6.2E-19 117.3 11.4 107 52-169 10-156 (201)
189 1p91_A Ribosomal RNA large sub 99.6 1.7E-14 5.9E-19 122.9 11.7 98 62-171 84-182 (269)
190 3kr9_A SAM-dependent methyltra 99.6 2E-14 6.9E-19 118.6 11.4 105 62-168 14-120 (225)
191 1fp2_A Isoflavone O-methyltran 99.6 1.2E-14 4E-19 129.0 10.7 102 61-171 186-292 (352)
192 3c3y_A Pfomt, O-methyltransfer 99.6 2.1E-14 7E-19 120.4 11.5 115 48-168 58-182 (237)
193 3adn_A Spermidine synthase; am 99.6 2.3E-14 7.8E-19 123.7 12.0 108 62-169 82-200 (294)
194 3m33_A Uncharacterized protein 99.6 9.2E-15 3.2E-19 121.5 9.2 90 62-164 47-139 (226)
195 2b25_A Hypothetical protein; s 99.6 2.2E-14 7.6E-19 126.4 12.1 113 52-169 94-221 (336)
196 3lec_A NADB-rossmann superfami 99.6 2.7E-14 9.2E-19 118.1 11.5 105 62-168 20-126 (230)
197 2avd_A Catechol-O-methyltransf 99.5 1.6E-14 5.4E-19 120.2 10.0 104 62-168 68-180 (229)
198 3cbg_A O-methyltransferase; cy 99.5 1.5E-14 5.1E-19 120.8 9.6 115 49-169 61-184 (232)
199 3gjy_A Spermidine synthase; AP 99.5 2.2E-14 7.6E-19 124.1 10.9 107 64-170 90-203 (317)
200 3gnl_A Uncharacterized protein 99.5 3.2E-14 1.1E-18 118.6 11.4 106 61-168 19-126 (244)
201 2qm3_A Predicted methyltransfe 99.5 2.1E-13 7.1E-18 121.8 17.2 105 61-167 170-278 (373)
202 3bwc_A Spermidine synthase; SA 99.5 3E-14 1E-18 123.7 11.3 109 61-169 93-212 (304)
203 3k6r_A Putative transferase PH 99.5 3.4E-14 1.2E-18 121.1 10.1 105 61-170 123-228 (278)
204 2yxl_A PH0851 protein, 450AA l 99.5 1.1E-13 3.7E-18 126.6 14.0 115 56-170 252-392 (450)
205 2b78_A Hypothetical protein SM 99.5 6.4E-14 2.2E-18 125.6 11.6 108 62-170 211-334 (385)
206 1zq9_A Probable dimethyladenos 99.5 5.2E-14 1.8E-18 121.1 10.4 113 49-164 14-144 (285)
207 3sso_A Methyltransferase; macr 99.5 3.3E-14 1.1E-18 125.8 9.3 108 51-169 205-326 (419)
208 1wxx_A TT1595, hypothetical pr 99.5 6.2E-14 2.1E-18 125.6 11.0 106 63-170 209-328 (382)
209 4dmg_A Putative uncharacterize 99.5 5E-14 1.7E-18 126.2 10.2 107 62-171 213-330 (393)
210 2bm8_A Cephalosporin hydroxyla 99.5 2.6E-14 9.1E-19 119.6 7.8 108 50-168 71-188 (236)
211 2f8l_A Hypothetical protein LM 99.5 1.5E-13 5.2E-18 121.4 12.9 117 53-170 119-259 (344)
212 3lcv_B Sisomicin-gentamicin re 99.5 4.5E-14 1.5E-18 117.4 8.8 102 62-165 131-234 (281)
213 3m6w_A RRNA methylase; rRNA me 99.5 8.5E-14 2.9E-18 126.7 11.4 113 57-170 95-232 (464)
214 1zg3_A Isoflavanone 4'-O-methy 99.5 6.2E-14 2.1E-18 124.6 10.2 108 54-170 182-296 (358)
215 3c0k_A UPF0064 protein YCCW; P 99.5 1.4E-13 4.8E-18 123.9 12.3 108 62-170 219-342 (396)
216 2h1r_A Dimethyladenosine trans 99.5 1.3E-13 4.4E-18 119.4 11.4 91 50-143 29-119 (299)
217 2frx_A Hypothetical protein YE 99.5 1.7E-13 5.7E-18 125.8 12.7 113 58-170 110-249 (479)
218 3tm4_A TRNA (guanine N2-)-meth 99.5 1.7E-13 6E-18 122.3 12.4 113 53-168 208-330 (373)
219 3m4x_A NOL1/NOP2/SUN family pr 99.5 8.2E-14 2.8E-18 126.7 10.3 114 57-170 99-237 (456)
220 1xj5_A Spermidine synthase 1; 99.5 1.1E-13 3.6E-18 121.5 10.7 108 60-167 117-235 (334)
221 2as0_A Hypothetical protein PH 99.5 1E-13 3.5E-18 124.8 10.4 109 62-171 216-339 (396)
222 2i7c_A Spermidine synthase; tr 99.5 9.1E-14 3.1E-18 119.5 9.6 110 60-169 75-194 (283)
223 2o07_A Spermidine synthase; st 99.5 1.4E-13 4.8E-18 119.4 10.3 110 60-169 92-211 (304)
224 1wy7_A Hypothetical protein PH 99.5 1.2E-12 4E-17 107.0 15.3 101 59-165 45-147 (207)
225 1uir_A Polyamine aminopropyltr 99.5 1.1E-13 3.6E-18 120.8 9.4 108 62-169 76-197 (314)
226 1sqg_A SUN protein, FMU protei 99.5 2.7E-13 9.3E-18 123.3 12.4 115 55-170 238-377 (429)
227 2zfu_A Nucleomethylin, cerebra 99.5 6.8E-14 2.3E-18 115.1 7.6 88 61-169 65-153 (215)
228 1inl_A Spermidine synthase; be 99.5 8.3E-14 2.9E-18 120.5 8.3 108 62-169 89-207 (296)
229 1ne2_A Hypothetical protein TA 99.5 3.7E-13 1.3E-17 109.5 11.7 90 60-157 48-139 (200)
230 3dou_A Ribosomal RNA large sub 99.5 2.4E-13 8.3E-18 110.0 10.5 107 51-170 12-142 (191)
231 1iy9_A Spermidine synthase; ro 99.5 1.1E-13 3.6E-18 118.5 8.7 107 62-168 74-190 (275)
232 2nyu_A Putative ribosomal RNA 99.5 4.6E-13 1.6E-17 108.4 11.6 99 61-170 20-148 (196)
233 1uwv_A 23S rRNA (uracil-5-)-me 99.5 1.2E-12 4.1E-17 119.1 15.2 115 47-167 270-389 (433)
234 3v97_A Ribosomal RNA large sub 99.5 1.8E-13 6.1E-18 131.2 10.1 106 63-169 539-659 (703)
235 2pt6_A Spermidine synthase; tr 99.5 9.8E-14 3.3E-18 121.3 7.6 108 62-169 115-232 (321)
236 2okc_A Type I restriction enzy 99.5 2.6E-13 8.8E-18 124.0 10.7 121 50-170 158-310 (445)
237 2jjq_A Uncharacterized RNA met 99.4 1.5E-12 5.3E-17 117.8 15.4 109 49-167 279-387 (425)
238 1mjf_A Spermidine synthase; sp 99.4 2.2E-13 7.5E-18 117.0 9.0 106 62-169 74-195 (281)
239 3ldu_A Putative methylase; str 99.4 8.9E-13 3E-17 118.0 13.3 121 50-170 182-347 (385)
240 3k0b_A Predicted N6-adenine-sp 99.4 1.2E-12 4.1E-17 117.3 13.9 122 49-170 187-353 (393)
241 2b2c_A Spermidine synthase; be 99.4 9.4E-14 3.2E-18 120.9 6.5 106 62-167 107-222 (314)
242 2yx1_A Hypothetical protein MJ 99.4 3.9E-13 1.3E-17 118.3 10.5 101 62-171 194-295 (336)
243 2wa2_A Non-structural protein 99.4 5.4E-14 1.9E-18 120.2 4.6 113 51-169 70-195 (276)
244 3frh_A 16S rRNA methylase; met 99.4 6E-13 2.1E-17 109.7 10.4 100 62-165 104-204 (253)
245 3hp7_A Hemolysin, putative; st 99.4 1.5E-13 5.1E-18 117.7 7.0 107 51-166 72-184 (291)
246 3ldg_A Putative uncharacterize 99.4 1.9E-12 6.7E-17 115.5 14.3 121 50-170 181-346 (384)
247 2oxt_A Nucleoside-2'-O-methylt 99.4 6.5E-14 2.2E-18 119.1 4.4 109 51-169 62-187 (265)
248 2cmg_A Spermidine synthase; tr 99.4 5.3E-13 1.8E-17 113.3 9.3 99 61-168 70-172 (262)
249 1yub_A Ermam, rRNA methyltrans 99.4 3E-14 1E-18 120.0 0.2 114 50-168 16-146 (245)
250 2ld4_A Anamorsin; methyltransf 99.4 1.6E-13 5.5E-18 109.4 4.4 91 58-168 7-102 (176)
251 2ih2_A Modification methylase 99.4 1.2E-12 4.2E-17 118.6 10.2 113 49-170 25-167 (421)
252 2p41_A Type II methyltransfera 99.4 1.8E-13 6.1E-18 118.7 4.4 113 52-170 71-194 (305)
253 3gru_A Dimethyladenosine trans 99.4 9.5E-12 3.2E-16 107.0 14.5 90 49-142 36-126 (295)
254 3bt7_A TRNA (uracil-5-)-methyl 99.4 1.9E-12 6.4E-17 115.4 10.1 115 48-171 199-330 (369)
255 2xyq_A Putative 2'-O-methyl tr 99.4 6E-12 2.1E-16 107.9 12.2 97 59-170 59-174 (290)
256 3opn_A Putative hemolysin; str 99.4 3.5E-13 1.2E-17 112.4 4.3 108 51-167 24-137 (232)
257 2b9e_A NOL1/NOP2/SUN domain fa 99.3 2.3E-11 7.9E-16 105.5 14.4 113 57-170 96-237 (309)
258 2dul_A N(2),N(2)-dimethylguano 99.3 8.1E-12 2.8E-16 111.3 11.0 101 63-167 47-164 (378)
259 3axs_A Probable N(2),N(2)-dime 99.3 5.7E-12 1.9E-16 112.4 9.6 102 62-167 51-158 (392)
260 1qam_A ERMC' methyltransferase 99.3 1.8E-11 6.1E-16 102.9 11.0 88 49-141 16-105 (244)
261 3fut_A Dimethyladenosine trans 99.3 3.1E-11 1.1E-15 102.6 11.3 89 49-143 33-123 (271)
262 2ar0_A M.ecoki, type I restric 99.2 1E-11 3.5E-16 115.7 8.1 148 15-170 126-315 (541)
263 1m6y_A S-adenosyl-methyltransf 99.2 1.7E-11 5.9E-16 105.7 8.5 89 51-140 14-108 (301)
264 3tqs_A Ribosomal RNA small sub 99.2 4.3E-11 1.5E-15 100.9 9.8 88 49-141 15-107 (255)
265 2qfm_A Spermine synthase; sper 99.2 3.3E-11 1.1E-15 105.5 8.6 108 62-170 187-317 (364)
266 3v97_A Ribosomal RNA large sub 99.2 2.2E-10 7.5E-15 109.9 13.3 121 50-170 177-350 (703)
267 2r6z_A UPF0341 protein in RSP 99.1 5.9E-11 2E-15 100.3 7.5 81 60-142 80-173 (258)
268 4gqb_A Protein arginine N-meth 99.1 3.6E-10 1.2E-14 106.0 13.2 128 36-164 326-464 (637)
269 3khk_A Type I restriction-modi 99.1 1.6E-10 5.5E-15 107.5 10.3 147 15-170 202-398 (544)
270 3lkd_A Type I restriction-modi 99.1 5.4E-10 1.8E-14 103.9 12.7 110 61-170 219-361 (542)
271 3uzu_A Ribosomal RNA small sub 99.1 3.4E-10 1.2E-14 96.7 9.3 89 49-141 28-125 (279)
272 3ftd_A Dimethyladenosine trans 99.1 1E-09 3.5E-14 92.3 11.2 110 49-166 17-130 (249)
273 2oyr_A UPF0341 protein YHIQ; a 99.0 1.5E-10 5.2E-15 97.5 5.4 89 53-143 76-177 (258)
274 3ua3_A Protein arginine N-meth 99.0 6.1E-10 2.1E-14 104.5 9.8 100 63-164 409-531 (745)
275 3ll7_A Putative methyltransfer 99.0 3.3E-10 1.1E-14 101.3 7.6 77 63-141 93-174 (410)
276 3o4f_A Spermidine synthase; am 99.0 3.4E-09 1.2E-13 90.4 11.7 110 61-170 81-201 (294)
277 3cvo_A Methyltransferase-like 99.0 1.8E-08 6.1E-13 81.4 14.9 111 44-167 16-154 (202)
278 1qyr_A KSGA, high level kasuga 98.9 5.9E-10 2E-14 93.9 5.2 86 50-141 8-101 (252)
279 3evf_A RNA-directed RNA polyme 98.9 4.6E-10 1.6E-14 94.0 4.3 118 50-169 61-186 (277)
280 3s1s_A Restriction endonucleas 98.9 7.4E-09 2.5E-13 98.6 12.9 110 62-171 320-469 (878)
281 3b5i_A S-adenosyl-L-methionine 98.9 1.1E-08 3.8E-13 90.5 11.4 124 49-172 33-230 (374)
282 4fzv_A Putative methyltransfer 98.8 1.2E-08 4E-13 89.9 10.0 114 57-170 142-287 (359)
283 3ufb_A Type I restriction-modi 98.8 8.9E-08 3.1E-12 88.9 14.1 146 16-170 176-365 (530)
284 3gcz_A Polyprotein; flavivirus 98.8 2.2E-09 7.4E-14 90.1 2.8 117 50-169 77-203 (282)
285 2k4m_A TR8_protein, UPF0146 pr 98.7 1.2E-07 4E-12 71.6 10.1 115 31-172 9-126 (153)
286 2wk1_A NOVP; transferase, O-me 98.6 1.3E-07 4.4E-12 80.5 10.1 121 46-168 88-245 (282)
287 2efj_A 3,7-dimethylxanthine me 98.6 8.2E-08 2.8E-12 85.1 7.8 107 64-173 53-231 (384)
288 1wg8_A Predicted S-adenosylmet 98.6 8.3E-08 2.8E-12 80.9 6.7 84 51-140 10-99 (285)
289 2qy6_A UPF0209 protein YFCK; s 98.5 1.1E-07 3.8E-12 80.0 6.8 104 62-165 59-211 (257)
290 3c6k_A Spermine synthase; sper 98.5 3.7E-07 1.3E-11 80.3 9.1 106 62-168 204-332 (381)
291 3p8z_A Mtase, non-structural p 98.5 2E-07 6.7E-12 75.8 6.5 119 49-170 64-189 (267)
292 4auk_A Ribosomal RNA large sub 98.5 6.5E-07 2.2E-11 78.4 9.8 86 61-159 209-295 (375)
293 1m6e_X S-adenosyl-L-methionnin 98.4 7.5E-08 2.6E-12 84.6 3.3 112 62-173 50-215 (359)
294 3lkz_A Non-structural protein 98.4 5.9E-07 2E-11 75.5 8.3 119 49-170 80-207 (321)
295 3eld_A Methyltransferase; flav 98.4 2.3E-06 7.8E-11 72.3 11.6 115 51-169 69-193 (300)
296 2px2_A Genome polyprotein [con 98.3 2.7E-07 9.2E-12 76.2 3.6 117 50-169 60-185 (269)
297 2zig_A TTHA0409, putative modi 98.2 6.6E-06 2.3E-10 70.7 9.6 59 50-111 223-281 (297)
298 3r24_A NSP16, 2'-O-methyl tran 98.0 3.2E-05 1.1E-09 65.0 9.5 109 50-172 91-222 (344)
299 3tka_A Ribosomal RNA small sub 98.0 8E-06 2.7E-10 70.4 5.9 86 51-140 45-138 (347)
300 1i4w_A Mitochondrial replicati 97.8 5E-05 1.7E-09 66.5 8.4 75 49-126 38-118 (353)
301 2oo3_A Protein involved in cat 97.8 5.3E-06 1.8E-10 70.0 1.8 102 64-169 92-200 (283)
302 1g60_A Adenine-specific methyl 97.7 7.4E-05 2.5E-09 62.8 7.7 59 50-111 200-258 (260)
303 2vz8_A Fatty acid synthase; tr 97.5 3E-05 1E-09 83.8 2.8 104 62-168 1239-1349(2512)
304 1rjd_A PPM1P, carboxy methyl t 97.5 0.0026 9E-08 55.3 14.2 106 62-169 96-234 (334)
305 3tos_A CALS11; methyltransfera 97.1 0.0043 1.5E-07 51.7 10.9 114 54-170 61-220 (257)
306 2py6_A Methyltransferase FKBM; 97.0 0.0023 7.8E-08 57.3 9.1 65 61-125 224-294 (409)
307 2uyo_A Hypothetical protein ML 97.0 0.01 3.5E-07 51.0 12.7 117 51-170 90-221 (310)
308 2c7p_A Modification methylase 96.9 0.005 1.7E-07 53.4 10.1 73 63-143 10-84 (327)
309 3g7u_A Cytosine-specific methy 96.9 0.0065 2.2E-07 53.7 10.8 72 65-143 3-84 (376)
310 3two_A Mannitol dehydrogenase; 96.8 0.0038 1.3E-07 54.5 8.1 95 56-166 169-264 (348)
311 2dph_A Formaldehyde dismutase; 96.8 0.0065 2.2E-07 54.1 9.6 102 57-166 179-298 (398)
312 1f8f_A Benzyl alcohol dehydrog 96.7 0.0074 2.5E-07 53.1 9.9 99 55-166 182-288 (371)
313 1kol_A Formaldehyde dehydrogen 96.7 0.003 1E-07 56.3 7.3 102 57-166 179-299 (398)
314 1g55_A DNA cytosine methyltran 96.7 0.0021 7.3E-08 56.1 6.1 75 64-143 2-81 (343)
315 1pl8_A Human sorbitol dehydrog 96.7 0.013 4.5E-07 51.2 11.0 97 57-166 165-272 (356)
316 3s2e_A Zinc-containing alcohol 96.6 0.014 4.8E-07 50.6 10.8 98 56-166 159-262 (340)
317 1boo_A Protein (N-4 cytosine-s 96.6 0.00045 1.5E-08 59.9 0.8 71 51-125 241-311 (323)
318 3ubt_Y Modification methylase 96.5 0.012 4.1E-07 50.9 9.6 71 65-143 1-74 (331)
319 3m6i_A L-arabinitol 4-dehydrog 96.4 0.013 4.4E-07 51.4 9.2 100 57-167 173-283 (363)
320 1e3j_A NADP(H)-dependent ketos 96.4 0.017 5.9E-07 50.3 9.9 97 57-166 162-270 (352)
321 4ej6_A Putative zinc-binding d 96.4 0.031 1.1E-06 49.1 11.6 97 57-166 176-283 (370)
322 1pqw_A Polyketide synthase; ro 96.4 0.031 1E-06 44.3 10.3 94 57-166 32-136 (198)
323 3vyw_A MNMC2; tRNA wobble urid 96.3 0.014 4.6E-07 49.9 8.0 130 35-165 66-224 (308)
324 1uuf_A YAHK, zinc-type alcohol 96.2 0.011 3.8E-07 52.0 7.6 95 57-166 188-287 (369)
325 3fpc_A NADP-dependent alcohol 96.1 0.015 5E-07 50.8 7.8 99 56-167 159-266 (352)
326 1v3u_A Leukotriene B4 12- hydr 96.1 0.026 9E-07 48.7 9.4 96 55-166 137-243 (333)
327 1eg2_A Modification methylase 96.1 0.011 3.7E-07 51.1 6.8 60 49-111 229-291 (319)
328 1cdo_A Alcohol dehydrogenase; 96.1 0.016 5.3E-07 51.1 8.0 95 57-166 186-293 (374)
329 2qrv_A DNA (cytosine-5)-methyl 96.1 0.023 8E-07 48.4 8.5 74 62-142 14-95 (295)
330 3jv7_A ADH-A; dehydrogenase, n 96.1 0.014 4.7E-07 50.8 7.3 96 60-167 168-270 (345)
331 1p0f_A NADP-dependent alcohol 96.1 0.014 4.9E-07 51.3 7.5 98 56-166 184-292 (373)
332 1e3i_A Alcohol dehydrogenase, 96.0 0.019 6.5E-07 50.6 8.1 95 57-166 189-296 (376)
333 3goh_A Alcohol dehydrogenase, 96.0 0.023 7.9E-07 48.7 8.3 92 57-166 136-228 (315)
334 4a2c_A Galactitol-1-phosphate 95.9 0.051 1.7E-06 47.1 10.3 101 55-167 152-260 (346)
335 2fzw_A Alcohol dehydrogenase c 95.9 0.018 6.3E-07 50.6 7.5 97 57-166 184-291 (373)
336 3uog_A Alcohol dehydrogenase; 95.9 0.028 9.5E-07 49.3 8.5 98 57-168 183-288 (363)
337 4b7c_A Probable oxidoreductase 95.8 0.01 3.5E-07 51.4 5.4 102 53-167 139-248 (336)
338 1rjw_A ADH-HT, alcohol dehydro 95.8 0.084 2.9E-06 45.7 11.3 95 57-166 158-260 (339)
339 2jhf_A Alcohol dehydrogenase E 95.8 0.059 2E-06 47.3 10.2 95 57-166 185-292 (374)
340 3fbg_A Putative arginate lyase 95.8 0.024 8.2E-07 49.3 7.5 95 57-165 138-246 (346)
341 3uko_A Alcohol dehydrogenase c 95.7 0.016 5.4E-07 51.1 6.3 100 55-167 185-295 (378)
342 3gms_A Putative NADPH:quinone 95.7 0.032 1.1E-06 48.4 8.2 99 55-167 136-243 (340)
343 1zkd_A DUF185; NESG, RPR58, st 95.7 0.086 2.9E-06 46.5 10.9 82 57-143 74-162 (387)
344 4dvj_A Putative zinc-dependent 95.7 0.022 7.5E-07 50.0 7.2 97 57-166 160-269 (363)
345 2j3h_A NADP-dependent oxidored 95.7 0.043 1.5E-06 47.6 8.9 95 57-166 149-254 (345)
346 2h6e_A ADH-4, D-arabinose 1-de 95.7 0.033 1.1E-06 48.4 8.1 94 60-166 168-268 (344)
347 2hcy_A Alcohol dehydrogenase 1 95.7 0.042 1.4E-06 47.7 8.9 95 57-166 163-268 (347)
348 3qv2_A 5-cytosine DNA methyltr 95.7 0.021 7.3E-07 49.4 6.8 75 63-143 9-89 (327)
349 4h0n_A DNMT2; SAH binding, tra 95.6 0.028 9.6E-07 48.8 7.1 74 65-143 4-82 (333)
350 4eez_A Alcohol dehydrogenase 1 95.5 0.053 1.8E-06 47.0 8.6 102 56-167 156-263 (348)
351 4eye_A Probable oxidoreductase 95.4 0.019 6.5E-07 49.9 5.7 96 57-167 153-257 (342)
352 1vj0_A Alcohol dehydrogenase, 95.4 0.057 2E-06 47.6 8.7 97 57-166 188-297 (380)
353 2c0c_A Zinc binding alcohol de 95.3 0.12 4E-06 45.2 10.5 97 57-167 157-261 (362)
354 1jvb_A NAD(H)-dependent alcoho 95.3 0.065 2.2E-06 46.5 8.7 98 57-166 164-270 (347)
355 3qwb_A Probable quinone oxidor 95.2 0.094 3.2E-06 45.2 9.3 95 59-167 144-247 (334)
356 1qor_A Quinone oxidoreductase; 95.0 0.15 5.2E-06 43.7 10.1 94 58-167 135-239 (327)
357 1yb5_A Quinone oxidoreductase; 95.0 0.28 9.5E-06 42.6 11.8 95 57-167 164-269 (351)
358 2b5w_A Glucose dehydrogenase; 95.0 0.055 1.9E-06 47.2 7.2 94 57-166 160-272 (357)
359 2d8a_A PH0655, probable L-thre 95.0 0.08 2.7E-06 46.0 8.2 97 57-167 162-267 (348)
360 4dup_A Quinone oxidoreductase; 94.9 0.12 4.1E-06 45.0 9.3 97 57-167 161-265 (353)
361 3jyn_A Quinone oxidoreductase; 94.9 0.088 3E-06 45.2 8.2 97 57-167 134-239 (325)
362 2zig_A TTHA0409, putative modi 94.7 0.016 5.4E-07 49.4 3.0 56 113-168 20-98 (297)
363 1piw_A Hypothetical zinc-type 94.7 0.055 1.9E-06 47.3 6.6 99 57-166 173-275 (360)
364 3nx4_A Putative oxidoreductase 94.7 0.11 3.7E-06 44.5 8.3 97 57-166 139-240 (324)
365 3gaz_A Alcohol dehydrogenase s 94.6 0.13 4.6E-06 44.4 8.7 93 57-166 144-245 (343)
366 3ip1_A Alcohol dehydrogenase, 94.6 0.29 1E-05 43.4 11.0 96 60-167 210-318 (404)
367 2eih_A Alcohol dehydrogenase; 94.6 0.14 4.9E-06 44.2 8.8 92 59-166 162-264 (343)
368 1wly_A CAAR, 2-haloacrylate re 94.5 0.22 7.6E-06 42.8 9.8 94 58-167 140-244 (333)
369 2j8z_A Quinone oxidoreductase; 94.5 0.15 5.3E-06 44.3 8.8 96 57-166 156-260 (354)
370 3fwz_A Inner membrane protein 94.3 0.28 9.6E-06 36.3 8.8 91 64-166 7-104 (140)
371 2cf5_A Atccad5, CAD, cinnamyl 94.1 0.057 1.9E-06 47.2 5.2 100 56-166 172-274 (357)
372 2zb4_A Prostaglandin reductase 94.1 0.4 1.4E-05 41.6 10.7 97 55-166 150-259 (357)
373 3oig_A Enoyl-[acyl-carrier-pro 94.1 0.8 2.7E-05 37.7 12.1 104 63-168 6-148 (266)
374 1iz0_A Quinone oxidoreductase; 94.0 0.1 3.5E-06 44.2 6.6 91 61-166 123-217 (302)
375 4dcm_A Ribosomal RNA large sub 94.0 0.32 1.1E-05 42.7 9.9 99 63-169 38-138 (375)
376 2cdc_A Glucose dehydrogenase g 94.0 0.17 5.8E-06 44.2 8.1 86 64-166 181-277 (366)
377 2dq4_A L-threonine 3-dehydroge 93.8 0.014 4.9E-07 50.7 0.8 94 58-166 160-261 (343)
378 3tqh_A Quinone oxidoreductase; 93.7 0.49 1.7E-05 40.4 10.3 95 57-166 146-244 (321)
379 1yqd_A Sinapyl alcohol dehydro 93.7 0.15 5.2E-06 44.6 7.2 98 57-166 180-281 (366)
380 4fs3_A Enoyl-[acyl-carrier-pro 93.5 1 3.5E-05 37.1 11.7 75 63-139 5-95 (256)
381 1xa0_A Putative NADPH dependen 93.5 0.053 1.8E-06 46.6 3.8 96 58-166 143-245 (328)
382 3iht_A S-adenosyl-L-methionine 93.4 0.24 8.2E-06 37.5 6.7 114 47-168 25-148 (174)
383 3krt_A Crotonyl COA reductase; 93.4 0.2 6.7E-06 45.3 7.6 94 59-166 224-343 (456)
384 3me5_A Cytosine-specific methy 93.3 0.075 2.6E-06 48.4 4.6 76 64-143 88-182 (482)
385 1pjc_A Protein (L-alanine dehy 93.3 0.094 3.2E-06 45.9 5.1 99 63-166 166-266 (361)
386 3pxx_A Carveol dehydrogenase; 93.2 1.1 3.7E-05 37.2 11.6 102 63-167 9-153 (287)
387 3tjr_A Short chain dehydrogena 93.2 0.76 2.6E-05 38.8 10.6 76 62-140 29-118 (301)
388 3o26_A Salutaridine reductase; 93.2 0.79 2.7E-05 38.5 10.7 76 63-140 11-101 (311)
389 3o38_A Short chain dehydrogena 93.1 0.97 3.3E-05 37.2 11.0 76 63-140 21-111 (266)
390 2vhw_A Alanine dehydrogenase; 93.0 0.095 3.2E-06 46.2 4.7 100 63-167 167-268 (377)
391 4f3n_A Uncharacterized ACR, CO 92.9 0.43 1.5E-05 42.6 8.8 46 64-109 138-188 (432)
392 3pvc_A TRNA 5-methylaminomethy 92.9 0.11 3.6E-06 49.7 5.2 104 62-165 57-209 (689)
393 3grk_A Enoyl-(acyl-carrier-pro 92.8 2.1 7.2E-05 35.9 12.9 103 62-168 29-170 (293)
394 2eez_A Alanine dehydrogenase; 92.8 0.13 4.4E-06 45.2 5.3 99 63-166 165-265 (369)
395 1tt7_A YHFP; alcohol dehydroge 92.8 0.2 6.7E-06 43.0 6.3 96 58-166 144-246 (330)
396 3p2y_A Alanine dehydrogenase/p 92.6 0.079 2.7E-06 46.6 3.6 95 63-165 183-300 (381)
397 1boo_A Protein (N-4 cytosine-s 92.6 0.092 3.2E-06 45.2 4.0 56 114-169 14-86 (323)
398 1zsy_A Mitochondrial 2-enoyl t 92.3 0.94 3.2E-05 39.2 10.2 97 59-166 163-269 (357)
399 3ijr_A Oxidoreductase, short c 92.3 1.6 5.6E-05 36.5 11.4 102 63-167 46-182 (291)
400 3ps9_A TRNA 5-methylaminomethy 92.2 0.19 6.6E-06 47.7 6.0 103 63-165 66-217 (676)
401 1wma_A Carbonyl reductase [NAD 92.1 0.77 2.6E-05 37.7 9.1 103 63-167 3-138 (276)
402 2vn8_A Reticulon-4-interacting 92.1 0.21 7.2E-06 43.8 5.8 93 61-166 181-279 (375)
403 4a0s_A Octenoyl-COA reductase/ 92.1 0.54 1.9E-05 42.2 8.6 96 59-166 216-335 (447)
404 3gqv_A Enoyl reductase; medium 92.0 0.41 1.4E-05 41.8 7.6 91 62-166 163-262 (371)
405 4eso_A Putative oxidoreductase 92.0 0.93 3.2E-05 37.2 9.3 99 63-167 7-138 (255)
406 3llv_A Exopolyphosphatase-rela 91.9 1 3.4E-05 33.1 8.7 67 64-139 6-79 (141)
407 3is3_A 17BETA-hydroxysteroid d 91.9 1.8 6.3E-05 35.7 11.1 103 63-168 17-153 (270)
408 4g81_D Putative hexonate dehyd 91.8 1.5 5E-05 36.3 10.2 75 63-140 8-96 (255)
409 3k31_A Enoyl-(acyl-carrier-pro 91.7 2.1 7.1E-05 36.0 11.4 102 63-168 29-169 (296)
410 3r3s_A Oxidoreductase; structu 91.7 1.8 6.1E-05 36.3 11.0 103 63-168 48-186 (294)
411 4dio_A NAD(P) transhydrogenase 91.7 0.12 4.2E-06 45.8 3.8 95 63-165 189-310 (405)
412 3iei_A Leucine carboxyl methyl 91.7 4.6 0.00016 34.7 13.6 105 63-169 90-231 (334)
413 3ius_A Uncharacterized conserv 91.5 2.4 8.3E-05 34.9 11.6 81 65-155 6-90 (286)
414 3v2g_A 3-oxoacyl-[acyl-carrier 91.4 2.4 8.4E-05 35.0 11.5 102 63-167 30-165 (271)
415 3l9w_A Glutathione-regulated p 91.4 0.53 1.8E-05 42.0 7.6 93 64-168 4-103 (413)
416 3lf2_A Short chain oxidoreduct 91.3 3.6 0.00012 33.8 12.3 76 63-140 7-97 (265)
417 1gu7_A Enoyl-[acyl-carrier-pro 91.3 0.42 1.4E-05 41.6 6.8 98 59-166 162-274 (364)
418 3ioy_A Short-chain dehydrogena 91.3 2.5 8.5E-05 35.9 11.6 76 63-140 7-97 (319)
419 3ggo_A Prephenate dehydrogenas 91.2 1.6 5.5E-05 37.2 10.3 88 64-164 33-125 (314)
420 3ce6_A Adenosylhomocysteinase; 91.1 0.89 3.1E-05 41.4 8.8 90 61-167 271-361 (494)
421 1l7d_A Nicotinamide nucleotide 91.0 0.2 7E-06 44.1 4.5 40 63-103 171-211 (384)
422 3edm_A Short chain dehydrogena 90.8 1.1 3.8E-05 36.8 8.7 102 63-167 7-143 (259)
423 4da9_A Short-chain dehydrogena 90.8 2.2 7.5E-05 35.5 10.6 75 63-140 28-117 (280)
424 3u5t_A 3-oxoacyl-[acyl-carrier 90.7 2.5 8.4E-05 34.9 10.8 102 63-167 26-161 (267)
425 1xg5_A ARPG836; short chain de 90.6 3.2 0.00011 34.2 11.4 77 63-140 31-121 (279)
426 1lss_A TRK system potassium up 90.5 3.7 0.00013 29.5 11.0 90 64-165 4-100 (140)
427 3pgx_A Carveol dehydrogenase; 90.5 2.9 9.9E-05 34.6 11.1 76 62-140 13-115 (280)
428 1ja9_A 4HNR, 1,3,6,8-tetrahydr 90.2 1.6 5.4E-05 35.8 9.1 76 63-140 20-109 (274)
429 3swr_A DNA (cytosine-5)-methyl 90.2 0.92 3.1E-05 45.0 8.6 74 63-143 539-631 (1002)
430 2g1u_A Hypothetical protein TM 89.9 0.8 2.7E-05 34.4 6.5 94 62-165 17-116 (155)
431 3oec_A Carveol dehydrogenase ( 89.9 3.7 0.00013 34.8 11.5 75 63-140 45-145 (317)
432 3tsc_A Putative oxidoreductase 89.9 3.8 0.00013 33.8 11.3 75 63-140 10-111 (277)
433 1x13_A NAD(P) transhydrogenase 89.8 0.2 6.7E-06 44.6 3.3 40 63-103 171-211 (401)
434 4egf_A L-xylulose reductase; s 89.8 2.5 8.4E-05 34.8 10.0 75 63-140 19-108 (266)
435 1y1p_A ARII, aldehyde reductas 89.6 6.2 0.00021 33.2 12.7 79 62-141 9-94 (342)
436 4fgs_A Probable dehydrogenase 89.3 3.2 0.00011 34.6 10.3 98 63-166 28-158 (273)
437 4ft4_B DNA (cytosine-5)-methyl 89.2 2.2 7.5E-05 41.2 10.4 46 62-107 210-260 (784)
438 1id1_A Putative potassium chan 89.0 2.3 8E-05 31.6 8.5 95 64-167 3-105 (153)
439 3l4b_C TRKA K+ channel protien 89.0 2 7E-05 34.1 8.6 89 66-165 2-97 (218)
440 4fn4_A Short chain dehydrogena 89.0 2.1 7E-05 35.4 8.8 74 63-139 6-93 (254)
441 2hwk_A Helicase NSP2; rossman 88.9 0.68 2.3E-05 38.7 5.6 88 72-171 150-258 (320)
442 2gdz_A NAD+-dependent 15-hydro 88.8 4.3 0.00015 33.2 10.8 77 63-141 6-97 (267)
443 3sx2_A Putative 3-ketoacyl-(ac 88.8 2.6 8.9E-05 34.8 9.4 76 63-141 12-113 (278)
444 3oid_A Enoyl-[acyl-carrier-pro 88.6 4.9 0.00017 32.8 11.0 75 63-139 3-91 (258)
445 3ksu_A 3-oxoacyl-acyl carrier 88.5 2.4 8.3E-05 34.8 9.0 103 63-167 10-147 (262)
446 3c85_A Putative glutathione-re 88.5 2.4 8.1E-05 32.6 8.5 91 64-166 39-138 (183)
447 3t4x_A Oxidoreductase, short c 88.2 4.3 0.00015 33.3 10.4 76 63-140 9-95 (267)
448 1g0o_A Trihydroxynaphthalene r 88.2 4.9 0.00017 33.2 10.8 103 63-167 28-163 (283)
449 3ek2_A Enoyl-(acyl-carrier-pro 88.1 4.5 0.00015 33.0 10.5 106 61-168 11-154 (271)
450 3gvc_A Oxidoreductase, probabl 87.9 5.5 0.00019 33.0 10.9 72 63-140 28-113 (277)
451 1xhl_A Short-chain dehydrogena 87.8 3.8 0.00013 34.4 9.9 76 63-139 25-115 (297)
452 3d4o_A Dipicolinate synthase s 87.8 2.6 8.7E-05 35.4 8.8 88 62-165 153-242 (293)
453 1zcj_A Peroxisomal bifunctiona 87.6 7.3 0.00025 35.1 12.2 95 64-165 37-148 (463)
454 1ae1_A Tropinone reductase-I; 87.5 2.8 9.5E-05 34.6 8.8 75 63-140 20-109 (273)
455 3ic5_A Putative saccharopine d 87.4 3.5 0.00012 28.6 8.2 69 63-140 4-79 (118)
456 3nbm_A PTS system, lactose-spe 87.3 2.2 7.7E-05 30.1 6.8 77 63-165 5-82 (108)
457 2x9g_A PTR1, pteridine reducta 87.0 5 0.00017 33.3 10.2 75 63-140 22-116 (288)
458 1g60_A Adenine-specific methyl 87.0 0.23 8E-06 41.2 1.8 53 115-167 5-74 (260)
459 2ew2_A 2-dehydropantoate 2-red 86.9 9.2 0.00031 31.9 11.9 90 65-166 4-107 (316)
460 3c24_A Putative oxidoreductase 86.8 4.3 0.00015 33.7 9.7 84 65-164 12-98 (286)
461 2ae2_A Protein (tropinone redu 86.7 2.9 0.0001 34.1 8.5 76 63-140 8-97 (260)
462 4a27_A Synaptic vesicle membra 86.7 0.42 1.4E-05 41.3 3.4 95 57-167 136-238 (349)
463 2dpo_A L-gulonate 3-dehydrogen 86.7 2.9 0.0001 35.7 8.6 95 65-165 7-121 (319)
464 2rir_A Dipicolinate synthase, 86.6 3.4 0.00012 34.8 9.0 88 62-165 155-244 (300)
465 3e8x_A Putative NAD-dependent 86.6 4.8 0.00016 32.1 9.6 71 63-141 20-95 (236)
466 2zwa_A Leucine carboxyl methyl 86.5 8.8 0.0003 36.4 12.7 103 63-168 107-255 (695)
467 3ucx_A Short chain dehydrogena 86.5 3.7 0.00013 33.6 9.0 73 63-138 10-96 (264)
468 2f1k_A Prephenate dehydrogenas 86.5 4.8 0.00016 33.2 9.8 86 65-164 1-88 (279)
469 4e21_A 6-phosphogluconate dehy 86.2 2 7E-05 37.3 7.4 89 64-165 22-113 (358)
470 3k6j_A Protein F01G10.3, confi 86.1 13 0.00043 33.5 12.8 96 64-166 54-165 (460)
471 3h7a_A Short chain dehydrogena 86.1 2.3 7.9E-05 34.7 7.5 75 63-140 6-93 (252)
472 1gee_A Glucose 1-dehydrogenase 86.0 4.7 0.00016 32.7 9.4 76 63-140 6-95 (261)
473 2i6t_A Ubiquitin-conjugating e 85.9 5.1 0.00018 33.9 9.7 98 63-166 13-124 (303)
474 3qiv_A Short-chain dehydrogena 85.6 3.5 0.00012 33.4 8.4 75 63-140 8-96 (253)
475 3pi7_A NADH oxidoreductase; gr 85.6 1.7 5.9E-05 37.4 6.8 91 62-166 162-262 (349)
476 4e6p_A Probable sorbitol dehyd 85.6 5 0.00017 32.7 9.3 72 63-140 7-92 (259)
477 1spx_A Short-chain reductase f 85.5 1.9 6.4E-05 35.6 6.7 77 63-140 5-96 (278)
478 3gaf_A 7-alpha-hydroxysteroid 85.4 4 0.00014 33.3 8.6 75 63-140 11-99 (256)
479 3gvp_A Adenosylhomocysteinase 85.4 13 0.00044 33.2 12.2 99 51-166 206-306 (435)
480 2a4k_A 3-oxoacyl-[acyl carrier 85.3 7.1 0.00024 32.0 10.1 72 63-140 5-90 (263)
481 3abi_A Putative uncharacterize 85.1 1.4 4.8E-05 38.3 6.0 66 63-138 15-85 (365)
482 3sc4_A Short chain dehydrogena 85.0 5 0.00017 33.3 9.2 75 63-140 8-103 (285)
483 3ado_A Lambda-crystallin; L-gu 84.9 3.2 0.00011 35.5 7.8 101 63-169 5-125 (319)
484 1eg2_A Modification methylase 84.8 0.46 1.6E-05 40.7 2.6 55 115-169 39-108 (319)
485 4e3z_A Putative oxidoreductase 84.8 10 0.00035 31.0 10.9 76 63-140 25-114 (272)
486 3hwr_A 2-dehydropantoate 2-red 84.5 5.9 0.0002 33.6 9.5 93 63-168 18-121 (318)
487 3gg2_A Sugar dehydrogenase, UD 84.5 5.6 0.00019 35.7 9.7 98 65-167 3-122 (450)
488 1bg6_A N-(1-D-carboxylethyl)-L 84.4 6.8 0.00023 33.5 10.0 92 65-166 5-108 (359)
489 3lyl_A 3-oxoacyl-(acyl-carrier 84.1 4.2 0.00014 32.7 8.1 75 63-140 4-92 (247)
490 3sju_A Keto reductase; short-c 84.0 4.1 0.00014 33.7 8.2 75 63-140 23-111 (279)
491 3b1f_A Putative prephenate deh 83.9 11 0.00038 31.2 10.9 89 65-164 7-98 (290)
492 4dkj_A Cytosine-specific methy 83.9 2 6.9E-05 38.0 6.4 45 64-108 10-59 (403)
493 1h2b_A Alcohol dehydrogenase; 83.9 2.7 9.2E-05 36.3 7.2 94 59-166 182-284 (359)
494 3av4_A DNA (cytosine-5)-methyl 83.8 2.7 9.4E-05 42.9 8.0 74 63-143 850-942 (1330)
495 3pk0_A Short-chain dehydrogena 83.8 3.8 0.00013 33.5 7.8 76 63-140 9-98 (262)
496 3rkr_A Short chain oxidoreduct 83.8 3.8 0.00013 33.5 7.8 77 62-140 27-116 (262)
497 3f9i_A 3-oxoacyl-[acyl-carrier 83.8 5.8 0.0002 31.9 8.9 73 62-140 12-94 (249)
498 1qsg_A Enoyl-[acyl-carrier-pro 83.7 8.6 0.00029 31.3 10.0 76 63-140 8-97 (265)
499 1fmc_A 7 alpha-hydroxysteroid 83.6 3 0.0001 33.7 7.1 76 63-140 10-98 (255)
500 3d1l_A Putative NADP oxidoredu 83.6 6.3 0.00022 32.2 9.1 88 64-165 10-100 (266)
No 1
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=100.00 E-value=2.4e-39 Score=282.59 Aligned_cols=267 Identities=25% Similarity=0.417 Sum_probs=230.6
Q ss_pred cchhHHHhhcCCChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC
Q 022836 6 QTDKAKEQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY 85 (291)
Q Consensus 6 ~~~~~~~~~yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~ 85 (291)
.....+++|||.++++|..++++.+.|++++|..+..++++++.++++.+++.+...++.+|||||||+|.++..+++.+
T Consensus 15 ~~~~~i~~~Yd~~~~~y~~~l~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~ 94 (302)
T 3hem_A 15 PPVEAVRSHYDKSNEFFKLWLDPSMTYSCAYFERPDMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEY 94 (302)
T ss_dssp CCHHHHHHHHTSCHHHHHHHSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH
T ss_pred chHHHHHHhcCCCHHHHHHhcCCCCceeeEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhC
Confidence 34577899999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCccEEEEccccccccc---------HHHHHHHHHh
Q 022836 86 SNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEMFEHMKN---------YQNLLKKISK 155 (291)
Q Consensus 86 ~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~~~~l~~~~~---------~~~~l~~~~~ 155 (291)
+.+|+|+|+|+.+++.+++++...+++ ++.++.+|+.++ +++||+|++..+++|+++ ...+++++.+
T Consensus 95 -~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~ 171 (302)
T 3hem_A 95 -DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYN 171 (302)
T ss_dssp -CCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHH
T ss_pred -CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHH
Confidence 489999999999999999999998885 799999999887 589999999999999944 4899999999
Q ss_pred ccccCeeEEEEeeccCCcccccccCCc---------cchhhhhccCCCCCCcHHHHHHhh--cCcEEEEeeecCCCcHHH
Q 022836 156 WMKEDTLLFVHHFCHKTFAYHFEDTND---------DDWITKYFFTGGTMPSANLLLYFQ--DDVSVVDHWLVNGKHYAQ 224 (291)
Q Consensus 156 ~LkpgG~l~~~~~~~~~~~~~~~~~~~---------~~w~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~y~~ 224 (291)
+|||||++++.++.......... ... ..|+.++++|++.+++...+..+. .++.+++. ...+.||.+
T Consensus 172 ~LkpgG~l~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~-~~~~~~y~~ 249 (302)
T 3hem_A 172 LTPDDGRMLLHTITIPDKEEAQE-LGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAGWKVERY-HRIGANYVP 249 (302)
T ss_dssp SSCTTCEEEEEEEECCCHHHHHH-HTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEE-EECGGGHHH
T ss_pred hcCCCcEEEEEEEeccCccchhh-ccccccccccchHHHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEE-EeCchhHHH
Confidence 99999999999887654321110 011 278999999999998877666543 35666554 556789999
Q ss_pred HHHHHHHHHHhcHHhHhhhHHhccCcchhHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEee
Q 022836 225 TSEEWLKRMDNNLASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHFLFRK 288 (291)
Q Consensus 225 tl~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 288 (291)
|+..|.+++.++..++.++ ++ ..+++.|+.|+.+|+.+|+.|. +++.||+++|
T Consensus 250 tl~~w~~~~~~~~~~~~~~----~~----~~~~~~w~~yl~~~~~~f~~~~---~~~~q~~~~~ 302 (302)
T 3hem_A 250 TLNAWADALQAHKDEAIAL----KG----QETCDIYMHYLRGCSDLFRDKY---TDVCQFTLVK 302 (302)
T ss_dssp HHHHHHHHHHHTHHHHHHH----HC----HHHHHHHHHHHHHHHHHHHTTS---SEEEEEEEEC
T ss_pred HHHHHHHHHHHhHHHHHHH----hC----HHHHHHHHHHHHHHHHHHhCCC---CeEEEEEEEC
Confidence 9999999999998887765 45 3689999999999999999988 6799999987
No 2
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=100.00 E-value=7.2e-37 Score=264.85 Aligned_cols=269 Identities=25% Similarity=0.430 Sum_probs=227.9
Q ss_pred ccchhHHHhhcCCChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH
Q 022836 5 IQTDKAKEQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK 84 (291)
Q Consensus 5 ~~~~~~~~~~yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~ 84 (291)
..+...++.|||.+++||+.++++.+.|++++|..+..++.+++.++++.+++.+...++.+|||||||+|.++..+++.
T Consensus 6 ~~~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~ 85 (287)
T 1kpg_A 6 KPHFANVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEK 85 (287)
T ss_dssp CCCHHHHHHHHTSCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHH
T ss_pred cccHHHHHHhcCCCHHHHHHhcCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHH
Confidence 34667899999999999999999999999999998889999999999999999998889999999999999999999966
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccEEEEccccccc--ccHHHHHHHHHhccccCe
Q 022836 85 YSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDT 161 (291)
Q Consensus 85 ~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~D~i~~~~~l~~~--~~~~~~l~~~~~~LkpgG 161 (291)
. +.+|+|+|+|+.+++.+++++...++ +++.++.+|+.+++ ++||+|++..+++|+ ++...+++++.++|||||
T Consensus 86 ~-~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG 162 (287)
T 1kpg_A 86 Y-DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADG 162 (287)
T ss_dssp H-CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTC
T ss_pred c-CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCC
Confidence 5 67999999999999999999988776 47999999998875 789999999999999 688999999999999999
Q ss_pred eEEEEeeccCCccccc--------ccCCccchhhhhccCCCCCCcHHHHHHhh--cCcEEEEeeecCCCcHHHHHHHHHH
Q 022836 162 LLFVHHFCHKTFAYHF--------EDTNDDDWITKYFFTGGTMPSANLLLYFQ--DDVSVVDHWLVNGKHYAQTSEEWLK 231 (291)
Q Consensus 162 ~l~~~~~~~~~~~~~~--------~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~y~~tl~~w~~ 231 (291)
++++.++......... .......|+.++++|++.+++...+..+. .++.+++ +...+.+|.+|+..|.+
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~-~~~~~~~y~~~~~~w~~ 241 (287)
T 1kpg_A 163 VMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTR-VQSLQPHYAKTLDLWSA 241 (287)
T ss_dssp EEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEE-EEECHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEE-EEeCcHhHHHHHHHHHH
Confidence 9999988765432100 00123457778889999888777666543 4566555 34556789999999999
Q ss_pred HHHhcHHhHhhhHHhccCcchhHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEee
Q 022836 232 RMDNNLASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHFLFRK 288 (291)
Q Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 288 (291)
++.++..++.+. ++ ..+++.|+.|+.+|+++|+.|. +++.||+++|
T Consensus 242 ~~~~~~~~~~~~----~~----~~~~~~~~~~l~~~~~~f~~g~---~~~~~~~~~k 287 (287)
T 1kpg_A 242 ALQANKGQAIAL----QS----EEVYERYMKYLTGCAEMFRIGY---IDVNQFTCQK 287 (287)
T ss_dssp HHHHTHHHHHHH----SC----HHHHHHHHHHHHHHHHHHHTTS---EEEEEEEEEC
T ss_pred HHHHHHHHHHHh----cC----hHHHHHHHHHHHHHHHHHhCCC---CeEEEEEEEC
Confidence 999888777654 33 3688999999999999999977 8899999987
No 3
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=100.00 E-value=1.2e-34 Score=254.44 Aligned_cols=268 Identities=23% Similarity=0.389 Sum_probs=222.9
Q ss_pred chhHHHhhcCCChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC
Q 022836 7 TDKAKEQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS 86 (291)
Q Consensus 7 ~~~~~~~~yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~ 86 (291)
+...++.|||.++++|+.++++.+.|++++|.....++.+++.++++.+++.+...++.+|||||||+|.++..+++.+
T Consensus 34 ~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~- 112 (318)
T 2fk8_A 34 RFEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF- 112 (318)
T ss_dssp ----CGGGGCCCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH-
T ss_pred hHHHHHHhcCCCHHHHHHHcCCCCCcceeeeCCCCCCHHHHHHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC-
Confidence 4466789999999999999999999999999988899999999999999999988899999999999999999999886
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccEEEEccccccc--ccHHHHHHHHHhccccCeeE
Q 022836 87 NCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLL 163 (291)
Q Consensus 87 ~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~D~i~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l 163 (291)
+++|+|+|+|+.+++.+++++...++ +++.++.+|+.+++ ++||+|++..+++|+ ++...+++++.++|||||++
T Consensus 113 ~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 190 (318)
T 2fk8_A 113 DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRM 190 (318)
T ss_dssp CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEE
Confidence 67999999999999999999988877 46999999998875 789999999999999 78999999999999999999
Q ss_pred EEEeeccCCcccccc--------cCCccchhhhhccCCCCCCcHHHHHHhh--cCcEEEEeeecCCCcHHHHHHHHHHHH
Q 022836 164 FVHHFCHKTFAYHFE--------DTNDDDWITKYFFTGGTMPSANLLLYFQ--DDVSVVDHWLVNGKHYAQTSEEWLKRM 233 (291)
Q Consensus 164 ~~~~~~~~~~~~~~~--------~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~y~~tl~~w~~~l 233 (291)
++.++.......... ......|+.++++|++.+++...+.... .++.+++ +...+.+|.+++..|.+++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~-~~~~~~~y~~~~~~w~~~~ 269 (318)
T 2fk8_A 191 TVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPE-PLSLRPHYIKTLRIWGDTL 269 (318)
T ss_dssp EEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTCBCCC-CEECHHHHHHHHHHHHHHH
T ss_pred EEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCCEEEE-EEecchhHHHHHHHHHHHH
Confidence 999987654321000 0012367778889988888766665543 3555544 3444568999999999999
Q ss_pred HhcHHhHhhhHHhccCcchhHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEeec
Q 022836 234 DNNLASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHFLFRKK 289 (291)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 289 (291)
.+...++... ++ ..+++.|..|+..|++.|+.|. .++.||+++||
T Consensus 270 ~~~~~~~~~~----~~----~~~~~~~~~~l~~~~~~f~~g~---~~~~~~~~~k~ 314 (318)
T 2fk8_A 270 QSNKDKAIEV----TS----EEVYNRYMKYLRGCEHYFTDEM---LDCSLVTYLKP 314 (318)
T ss_dssp HHTHHHHHHH----SC----HHHHHHHHHHHHHHHHHHHTTS---CEEEEEEEECT
T ss_pred HHHHHHHHHh----cC----hHHHHHHHHHHHHHHHHHHCCC---CeEEEEEEEeC
Confidence 9887776554 33 3688999999999999999987 57999999998
No 4
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=100.00 E-value=6.7e-31 Score=225.56 Aligned_cols=265 Identities=18% Similarity=0.231 Sum_probs=186.9
Q ss_pred CCccccchhHHHhhcCCChHHHHHhhCCCCCccccccCCCC--CCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHH
Q 022836 1 MPIAIQTDKAKEQHYELPTSFFKLVLGKYFKYSCCYFSDAS--KTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLS 78 (291)
Q Consensus 1 ~~~~~~~~~~~~~~yd~~~~~~~~~~~~~~~y~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~ 78 (291)
||- .+...++.|||..+++|..++++.+++ ++|.... .++.+++.++.+.+++.+...++.+|||||||+|.++
T Consensus 1 m~~--p~~~~~~~~Yd~~~~~y~~~~~~~~~~--~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~ 76 (273)
T 3bus_A 1 MAA--PTPEEVRQMYDDFTDPFARIWGENLHF--GYWEDAGADVSVDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPA 76 (273)
T ss_dssp ------------------------CCGGGCCC--CCCCCSSCCCCHHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHH
T ss_pred CCC--CcHHHHHHHHcchHHHHHHHcCCCceE--EecCCCccccCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHH
Confidence 454 567779999999999999999997755 8998765 6899999999999999999889999999999999999
Q ss_pred HHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-CCccEEEEcccccccccHHHHHHHHHhc
Q 022836 79 LYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKW 156 (291)
Q Consensus 79 ~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~ 156 (291)
..+++.. +.+|+|+|+|+.+++.+++++...++ +++.++.+|+.+++.+ ++||+|++..+++|+++...+++++.++
T Consensus 77 ~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~ 155 (273)
T 3bus_A 77 VRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARV 155 (273)
T ss_dssp HHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTT
T ss_pred HHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHH
Confidence 9999876 78999999999999999999988887 4799999999998766 7899999999999999999999999999
Q ss_pred cccCeeEEEEeeccCCcccccccCCccchhhh--hccCCCCCCcHHHHHHh-h-cCcEEEEeeecCCCcHHHHHHHHHHH
Q 022836 157 MKEDTLLFVHHFCHKTFAYHFEDTNDDDWITK--YFFTGGTMPSANLLLYF-Q-DDVSVVDHWLVNGKHYAQTSEEWLKR 232 (291)
Q Consensus 157 LkpgG~l~~~~~~~~~~~~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~y~~tl~~w~~~ 232 (291)
|||||++++.++......... ...+... ..++....++...+... . .++.+++ +...+.+|.+++..|.++
T Consensus 156 L~pgG~l~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~-~~~~~~~~~~~~~~~~~~ 230 (273)
T 3bus_A 156 LRPGGTVAIADFVLLAPVEGA----KKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTS-TVDISAQARPSLVKTAEA 230 (273)
T ss_dssp EEEEEEEEEEEEEESSCCCHH----HHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEE-EEECHHHHTTHHHHHHHH
T ss_pred cCCCeEEEEEEeeccCCCChh----HHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEE-EEECcHhHHHHHHHHHHH
Confidence 999999999888654321110 0111111 12345555555544443 3 4666654 344456777899999999
Q ss_pred HHhcHHhHhhhHHhccCcchhHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEeec
Q 022836 233 MDNNLASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHFLFRKK 289 (291)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 289 (291)
+.+....+.. .++++..+.+...|+.+ +..+. ++.+++++|||
T Consensus 231 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~kp 273 (273)
T 3bus_A 231 FENARSQVEP----FMGAEGLDRMIATFRGL-------AEVPE---AGYVLIGARKP 273 (273)
T ss_dssp HHHTHHHHHH----HHCHHHHHHHHHHHHHH-------HTCTT---EEEEEEEEECC
T ss_pred HHHhHHHHHh----hcCHHHHHHHHHHHHHH-------hhCCC---eeEEEEEEECC
Confidence 9877554433 35655545555555432 44443 89999999998
No 5
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.96 E-value=1.8e-26 Score=200.47 Aligned_cols=261 Identities=17% Similarity=0.198 Sum_probs=193.3
Q ss_pred chhHHHhhcCCC--hHHHHHhh-CCCCCccccccCCC--CCCHHHHHHHHHHHHHHHc----CCCCCCEEEEEcCCcchH
Q 022836 7 TDKAKEQHYELP--TSFFKLVL-GKYFKYSCCYFSDA--SKTLEDAEKAMLELYCERS----RLEDGHTVLDVGCGWGSL 77 (291)
Q Consensus 7 ~~~~~~~~yd~~--~~~~~~~~-~~~~~y~~~~~~~~--~~~l~~~~~~~~~~~~~~~----~~~~~~~vLDiGcG~G~~ 77 (291)
+...+..|||.. .+||+..+ ++.+++ ++|... ...+.+++.+.+..+++.+ ...++.+|||+|||+|.+
T Consensus 19 ~~~~~~~~Yd~~~~~~~y~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~ 96 (297)
T 2o57_A 19 VKDNAEIYYDDDDSDRFYFHVWGGEDIHV--GLYKEPVDQDEIREASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGA 96 (297)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHTTSCCCS--CCCCSSGGGSCHHHHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHH
T ss_pred HHHHHHHHcCCccchhHHHHHhCCCceEE--EecCCCCCCcchHHHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHH
Confidence 345688999997 49998777 566655 899877 7899999999999999998 778899999999999999
Q ss_pred HHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-CCccEEEEcccccccccHHHHHHHHHh
Q 022836 78 SLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISK 155 (291)
Q Consensus 78 ~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~ 155 (291)
+..+++.+ +.+|+|+|+|+.+++.++++....++ +++.++.+|+.+++.+ ++||+|++..+++|+++...+++++.+
T Consensus 97 ~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~ 175 (297)
T 2o57_A 97 ARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECAR 175 (297)
T ss_dssp HHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHH
T ss_pred HHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHH
Confidence 99999876 67999999999999999999988887 4799999999998765 789999999999999999999999999
Q ss_pred ccccCeeEEEEeeccCCcccccccCCccchhhhhccCCCCCCcHHHHHH-h-hcCcEEEEeeecC---CCcHHHHHHHHH
Q 022836 156 WMKEDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGGTMPSANLLLY-F-QDDVSVVDHWLVN---GKHYAQTSEEWL 230 (291)
Q Consensus 156 ~LkpgG~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~---~~~y~~tl~~w~ 230 (291)
+|||||++++.++......... ....+...+..+. +.+...+.. + ..++.+++..... ..+|.+++..|.
T Consensus 176 ~LkpgG~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (297)
T 2o57_A 176 VLKPRGVMAITDPMKEDGIDKS---SIQPILDRIKLHD--MGSLGLYRSLAKECGLVTLRTFSRPDSLVHHYSKVKAELI 250 (297)
T ss_dssp HEEEEEEEEEEEEEECTTCCGG---GGHHHHHHHTCSS--CCCHHHHHHHHHHTTEEEEEEEECHHHHHHHHHHHHHHHH
T ss_pred HcCCCeEEEEEEeccCCCCchH---HHHHHHHHhcCCC--CCCHHHHHHHHHHCCCeEEEEEECchhhHHHHHHHHHHHH
Confidence 9999999999988665432111 1122333322332 233333332 3 3466665543221 134555555555
Q ss_pred HHHHhcHHhHhhhHHhccCcchhHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEeecC
Q 022836 231 KRMDNNLASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVTHFLFRKKM 290 (291)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 290 (291)
+.... + .+.++ ...++.|..++..+.+.++.|. ++.++|++|||.
T Consensus 251 ~~~~~----~----~~~~~----~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~a~Kp~ 295 (297)
T 2o57_A 251 KRSSE----I----ASFCS----PEFQANMKRGLEHWIEGGRAGK---LTWGGMLFRKSD 295 (297)
T ss_dssp HTHHH----H----TTTSC----HHHHHHHHHHHHHHHHHHHTTS---EEEEEEEEEESS
T ss_pred HhHHH----H----hccCC----HHHHHHHHHHHHHHHHhccCCe---EEEEEEEEECCC
Confidence 43221 1 12233 2456777777777777776655 889999999994
No 6
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.92 E-value=1.7e-23 Score=178.34 Aligned_cols=220 Identities=19% Similarity=0.230 Sum_probs=165.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 128 (291)
......+++.+...++.+|||+|||+|.++..+++.+ +.+|+|+|+|+.+++.++++.... +++.++.+|+.+.+.+
T Consensus 41 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~ 117 (266)
T 3ujc_A 41 LEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEFP 117 (266)
T ss_dssp HHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCCC
Confidence 3456777788888899999999999999999999887 789999999999999988776443 4899999999998765
Q ss_pred -CCccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEeeccCCcccccccCCccchhhhhccCCC-CCCcHHHHHH
Q 022836 129 -ASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGG-TMPSANLLLY 204 (291)
Q Consensus 129 -~~~D~i~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~ 204 (291)
++||+|++..+++|+ ++...+++++.++|||||.+++.++....... .......+..+.+ ..++...+..
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 191 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKEN------WDDEFKEYVKQRKYTLITVEEYAD 191 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGG------CCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCccc------chHHHHHHHhcCCCCCCCHHHHHH
Confidence 899999999999999 89999999999999999999999886654211 1111222222222 2334443333
Q ss_pred -h-hcCcEEEEeeecCCCcHHHHHHHHHHHHHhcHHhHhhhHHhccCcchhHHHHHHHHHHHHHHHHHhcCCCCceEEEE
Q 022836 205 -F-QDDVSVVDHWLVNGKHYAQTSEEWLKRMDNNLASIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVT 282 (291)
Q Consensus 205 -~-~~~~~~~~~~~~~~~~y~~tl~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 282 (291)
+ ..++..++. ...+.+|..++..|.+.+.....++... ++++....+...|..|+.++.. |. .+.+
T Consensus 192 ~l~~~Gf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~----g~---~~w~ 259 (266)
T 3ujc_A 192 ILTACNFKNVVS-KDLSDYWNQLLEVEHKYLHENKEEFLKL----FSEKKFISLDDGWSRKIKDSKR----KM---QRWG 259 (266)
T ss_dssp HHHHTTCEEEEE-EECHHHHHHHHHHHHHHHHHTHHHHHHH----SCHHHHHHHHHHHHHHHHHHHT----TS---EEEE
T ss_pred HHHHcCCeEEEE-EeCCHHHHHHHHHHHHHHHhCHHHHHHh----cCHHHHHHHHHHHHHHHHHHHc----Cc---ccce
Confidence 3 245665553 3445678889999999998887776554 5655556777779888877763 22 5567
Q ss_pred EEEEeec
Q 022836 283 HFLFRKK 289 (291)
Q Consensus 283 ~~~~~~~ 289 (291)
.|++|||
T Consensus 260 ~~~~~Kp 266 (266)
T 3ujc_A 260 YFKATKN 266 (266)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 7788998
No 7
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.89 E-value=1.7e-22 Score=176.69 Aligned_cols=211 Identities=16% Similarity=0.192 Sum_probs=158.9
Q ss_pred HhhcCCChHHHHHhhCCC-CCccccccCCCCCCHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCE
Q 022836 12 EQHYELPTSFFKLVLGKY-FKYSCCYFSDASKTLEDAEKAMLELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCK 89 (291)
Q Consensus 12 ~~~yd~~~~~~~~~~~~~-~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~ 89 (291)
.+|||.+++++..+.++. +.|+...|.. ....+......+++.+. ..++.+|||+|||+|.++..+++.+ +.+
T Consensus 68 ~~~y~~~~~~~~~~~~~~~~~y~~~~f~~----~~~~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~ 142 (312)
T 3vc1_A 68 HHHYGIGPVDRAALGDPEHSEYEKKVIAE----LHRLESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSR 142 (312)
T ss_dssp CCSCCCSCCCHHHHCCTTSTTHHHHHHHH----HHHHHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCE
T ss_pred hhhcCCchhHHHhhcCCCccccchHHHhh----hhhHHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCE
Confidence 578999999888888877 8898888863 44445555567777777 7889999999999999999999876 789
Q ss_pred EEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 90 ITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 90 v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
|+|+|+|+.+++.+++++...+++ ++.++.+|+.+++.+ ++||+|++..+++++ +...+++++.++|||||++++.+
T Consensus 143 v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 143 VEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEE
Confidence 999999999999999999998884 799999999998765 899999999999999 59999999999999999999988
Q ss_pred eccCCcccccccCCccchhhhhccCCCCCCcHHHHHH-hh-cCcEEEEeeecCCCcHHHHHHHHHHHHHhc
Q 022836 168 FCHKTFAYHFEDTNDDDWITKYFFTGGTMPSANLLLY-FQ-DDVSVVDHWLVNGKHYAQTSEEWLKRMDNN 236 (291)
Q Consensus 168 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~y~~tl~~w~~~l~~~ 236 (291)
+......... .....++.+..++. +++...+.. +. .++.+++.... -..++..|...+...
T Consensus 222 ~~~~~~~~~~--~~~~~~~~~~~~~~--~~s~~~~~~~l~~aGf~~~~~~~~----~~~~~~~w~~~~~~~ 284 (312)
T 3vc1_A 222 GCWNPRYGQP--SKWVSQINAHFECN--IHSRREYLRAMADNRLVPHTIVDL----TPDTLPYWELRATSS 284 (312)
T ss_dssp EEECTTTCSC--CHHHHHHHHHHTCC--CCBHHHHHHHHHTTTEEEEEEEEC----HHHHHHHHHHHTTST
T ss_pred ccccccccch--hHHHHHHHhhhcCC--CCCHHHHHHHHHHCCCEEEEEEeC----CHHHHHHHHHHHHHh
Confidence 7665432110 01122333333332 344443333 33 35555543221 156888888876643
No 8
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.87 E-value=4.9e-20 Score=157.35 Aligned_cols=176 Identities=16% Similarity=0.206 Sum_probs=130.9
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-
Q 022836 52 LELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME- 128 (291)
Q Consensus 52 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~- 128 (291)
...++..+. ..++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.+++++...++ ++++++.+|+.+++.+
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (267)
T 3kkz_A 34 TLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRN 112 (267)
T ss_dssp HHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCT
T ss_pred HHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCC
Confidence 444555554 678899999999999999999987 577999999999999999999998888 4699999999998765
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCCcccccccCCccchhhhhccCCCCCCcHHHHHHh--h
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGGTMPSANLLLYF--Q 206 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~--~ 206 (291)
++||+|++..+++++ +...+++++.++|||||++++.++......... .....|... +| .+++...+... .
T Consensus 113 ~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--~~~~~~~~~--~~--~~~~~~~~~~~l~~ 185 (267)
T 3kkz_A 113 EELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPA--EINDFWMDA--YP--EIDTIPNQVAKIHK 185 (267)
T ss_dssp TCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCH--HHHHHHHHH--CT--TCEEHHHHHHHHHH
T ss_pred CCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChH--HHHHHHHHh--CC--CCCCHHHHHHHHHH
Confidence 889999999999999 899999999999999999999887643221110 001223222 22 33444433332 3
Q ss_pred cCcEEEEeeecCC----CcHHHHHHHHHHHHHh
Q 022836 207 DDVSVVDHWLVNG----KHYAQTSEEWLKRMDN 235 (291)
Q Consensus 207 ~~~~~~~~~~~~~----~~y~~tl~~w~~~l~~ 235 (291)
.++..++...... .+|..++..|...+..
T Consensus 186 aGf~~v~~~~~~~~~w~~~~~~~~~~~~~~~~~ 218 (267)
T 3kkz_A 186 AGYLPVATFILPENCWTDHYFTPKVAAQKIFLT 218 (267)
T ss_dssp TTEEEEEEEECCGGGTTTTTHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCHhHHHHHHHHHHHHHHHHHHH
Confidence 4666655433211 5788888999888764
No 9
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.87 E-value=3e-20 Score=157.45 Aligned_cols=123 Identities=15% Similarity=0.167 Sum_probs=110.2
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM 127 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~ 127 (291)
...+..+++.+...++.+|||+|||+|..+..+++.. +.+|+|+|+|+.+++.+++++...++ +++.++.+|+.++++
T Consensus 22 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 100 (256)
T 1nkv_A 22 EEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA 100 (256)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc
Confidence 3456677777888899999999999999999999887 78999999999999999999998887 479999999999766
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022836 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
.++||+|++..+++++++...+++++.++|||||++++.++....
T Consensus 101 ~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~ 145 (256)
T 1nkv_A 101 NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQ 145 (256)
T ss_dssp SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETT
T ss_pred CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccC
Confidence 688999999999999999999999999999999999998875543
No 10
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.84 E-value=4.2e-19 Score=150.50 Aligned_cols=118 Identities=20% Similarity=0.298 Sum_probs=103.9
Q ss_pred HHHHHHHHc-CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC
Q 022836 51 MLELYCERS-RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME 128 (291)
Q Consensus 51 ~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~ 128 (291)
....+++.+ ...++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.+++++...+++ +++++++|+.+++.+
T Consensus 33 ~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (257)
T 3f4k_A 33 ATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQ 111 (257)
T ss_dssp HHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSC
T ss_pred HHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCC
Confidence 344455555 456788999999999999999999874 49999999999999999999998884 599999999988766
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 -~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
++||+|++..+++|+ +...+++++.++|||||++++.++..
T Consensus 112 ~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~ 153 (257)
T 3f4k_A 112 NEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASW 153 (257)
T ss_dssp TTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred CCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 899999999999999 78999999999999999999998764
No 11
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.83 E-value=4.1e-20 Score=158.52 Aligned_cols=137 Identities=24% Similarity=0.364 Sum_probs=109.4
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCC
Q 022836 35 CYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQN 114 (291)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~ 114 (291)
++++.....+..........+.......++.+|||||||+|.++..+++.+|+.+|+|+|+|+.+++.+++++...++++
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~ 88 (276)
T 3mgg_A 9 GYSEREALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKN 88 (276)
T ss_dssp --------------CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCS
T ss_pred CCCHHHHhhHHHHHHHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCC
Confidence 33333333344433444444444455678999999999999999999999888999999999999999999999888888
Q ss_pred eEEEEccccCCccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 115 VEIIVADISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 115 v~~~~~d~~~~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
+.++.+|+.+++.+ ++||+|++..+++++++...+++++.++|||||++++.++...
T Consensus 89 ~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 146 (276)
T 3mgg_A 89 VKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHG 146 (276)
T ss_dssp EEEEECCGGGCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGG
T ss_pred cEEEEcccccCCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 99999999998765 8999999999999999999999999999999999999887653
No 12
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.83 E-value=3.1e-20 Score=157.91 Aligned_cols=122 Identities=15% Similarity=0.120 Sum_probs=107.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 128 (291)
...+..+++.+...++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.+++++...+++++.++.+|+.+++.+
T Consensus 23 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~ 100 (260)
T 1vl5_A 23 GSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFT 100 (260)
T ss_dssp CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSC
T ss_pred HHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCC
Confidence 3445667777777889999999999999999999874 59999999999999999999888887899999999998766
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022836 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 129 -~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
++||+|+++.+++|+++...+++++.++|||||++++.++..+.
T Consensus 101 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~ 145 (260)
T 1vl5_A 101 DERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPE 145 (260)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCS
T ss_pred CCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCC
Confidence 89999999999999999999999999999999999998765543
No 13
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.83 E-value=9e-20 Score=155.18 Aligned_cols=110 Identities=23% Similarity=0.336 Sum_probs=97.0
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccEEEEc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSI 137 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~D~i~~~ 137 (291)
.+++.+|||||||+|..+..+++.. ++++|+|+|+|+.|++.|++++...+. .+++++++|+.+++. ++||+|+++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~-~~~d~v~~~ 146 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI-ENASMVVLN 146 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC-CSEEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc-cccccceee
Confidence 5788999999999999999999874 578999999999999999999988776 479999999999865 579999999
Q ss_pred ccccccc--cHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 138 EMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 138 ~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
.++++++ +...++++++++|||||+|++.+....
T Consensus 147 ~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 147 FTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred eeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 9999985 445789999999999999999876543
No 14
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.82 E-value=2.2e-19 Score=147.22 Aligned_cols=116 Identities=13% Similarity=0.133 Sum_probs=95.7
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh------------CCCCeEEEE
Q 022836 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL------------ELQNVEIIV 119 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------~~~~v~~~~ 119 (291)
+..++..+...++.+|||+|||+|..+..|+++ +.+|+|+|+|+.|++.|+++.... ...++++++
T Consensus 11 l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 88 (203)
T 1pjz_A 11 LQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWC 88 (203)
T ss_dssp HHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEE
T ss_pred HHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEE
Confidence 344455566778899999999999999999988 789999999999999998875421 124799999
Q ss_pred ccccCCccC--CCccEEEEcccccccc--cHHHHHHHHHhccccCeeEEEEeec
Q 022836 120 ADISTFEME--ASYDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 120 ~d~~~~~~~--~~~D~i~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
+|+.+++.. ++||+|++..++++++ +...+++++.++|||||++++.+..
T Consensus 89 ~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~ 142 (203)
T 1pjz_A 89 GDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLE 142 (203)
T ss_dssp ECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEES
T ss_pred CccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEe
Confidence 999998764 6899999999999885 4567999999999999996665543
No 15
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.82 E-value=5.5e-21 Score=161.88 Aligned_cols=186 Identities=19% Similarity=0.241 Sum_probs=128.8
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CC
Q 022836 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-AS 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 130 (291)
...+++.+...++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.++++.. ..++.++.+|+.+++.+ ++
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~ 108 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHG-AKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAIEPDA 108 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCCCTTC
T ss_pred HHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCCCCCC
Confidence 3455666666688999999999999999999874 2399999999999999887754 34799999999988765 89
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCCcccccccCCccchhhhhccCCCCCCcHHHHHHhhcCcE
Q 022836 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGGTMPSANLLLYFQDDVS 210 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (291)
||+|++..+++++++...+++++.++|||||.+++..+........ ...|... ..+.........++.....
T Consensus 109 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~ 180 (253)
T 3g5l_A 109 YNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADG-----RQDWYTD---ETGNKLHWPVDRYFNESMR 180 (253)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSS-----SCSCEEC---SSCCEEEEEECCTTCCCEE
T ss_pred eEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCc-----cccceec---cCCceEEEEeccccccceE
Confidence 9999999999999999999999999999999999987654321110 1112110 0000000000001111111
Q ss_pred EEEeeec-CCCcHHHHHHHHHHHHHhcHHhHhhhHHhccCc
Q 022836 211 VVDHWLV-NGKHYAQTSEEWLKRMDNNLASIKPIMESTYGK 250 (291)
Q Consensus 211 ~~~~~~~-~~~~y~~tl~~w~~~l~~~~~~~~~~~~~~~~~ 250 (291)
...|.. ....|++|..+|.+.|.++||++....+...++
T Consensus 181 -~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~~~~ 220 (253)
T 3g5l_A 181 -TSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEPEPAP 220 (253)
T ss_dssp -EEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECCCCCG
T ss_pred -EEeeccccCccEecCHHHHHHHHHHcCCeeeeeecCCCch
Confidence 112211 112355689999999999999988776555443
No 16
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.82 E-value=6.4e-20 Score=156.92 Aligned_cols=155 Identities=10% Similarity=0.126 Sum_probs=120.6
Q ss_pred hHHHhhcCCChHHHHHhhCCCCCccccccCC--CCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC
Q 022836 9 KAKEQHYELPTSFFKLVLGKYFKYSCCYFSD--ASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS 86 (291)
Q Consensus 9 ~~~~~~yd~~~~~~~~~~~~~~~y~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~ 86 (291)
..++.+|+...++|+..+...+..+..-|.. .....+. ..++...-...+.+.++.+|||||||+|.++..++.+.+
T Consensus 67 ~~~~~~y~~~~~~~E~~wa~~l~~~~~p~~~l~~fpy~~~-~~~l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ 145 (298)
T 3fpf_A 67 SLIRKFYVNLGMKLEMEKAQEVIESDSPWETLRSFYFYPR-YLELLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVY 145 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHTSTTHHH-HHHHHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCChHHhhccCCCccc-HHHHHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHcc
Confidence 5677899999999999887765332211000 0012222 344444444567889999999999999987765555556
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 87 NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 87 ~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+++|+|+|+|+++++.|+++++..|+++++++++|+.+++ .++||+|++... +++..++++++.+.|||||++++.
T Consensus 146 ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~-d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 146 GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID-GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 9999999999999999999999888888999999999875 588999998654 578899999999999999999987
Q ss_pred ee
Q 022836 167 HF 168 (291)
Q Consensus 167 ~~ 168 (291)
..
T Consensus 222 ~~ 223 (298)
T 3fpf_A 222 TY 223 (298)
T ss_dssp EC
T ss_pred cC
Confidence 64
No 17
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.81 E-value=2.5e-19 Score=148.22 Aligned_cols=120 Identities=22% Similarity=0.302 Sum_probs=107.8
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CC
Q 022836 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-AS 130 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 130 (291)
..+++.+...++.+|||+|||+|.++..+++.. |..+|+|+|+|+.+++.+++++...+++++.++.+|+.+++.+ ++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 106 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNT 106 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSC
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCC
Confidence 455566677889999999999999999999885 6689999999999999999999988887899999999987765 78
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022836 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
||+|++..+++++++...+++++.++|||||.+++.++....
T Consensus 107 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 148 (219)
T 3dh0_A 107 VDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEE 148 (219)
T ss_dssp EEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred eeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccc
Confidence 999999999999999999999999999999999998876543
No 18
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.81 E-value=2e-19 Score=152.27 Aligned_cols=147 Identities=11% Similarity=0.052 Sum_probs=112.1
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----
Q 022836 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---- 127 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---- 127 (291)
...+++.+...++.+|||||||+|.++..++++ +.+|+|+|+|+.|++.+++++... ++..++.+...
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~------~v~~~~~~~~~~~~~ 105 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR------CVTIDLLDITAEIPK 105 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS------CCEEEECCTTSCCCG
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc------cceeeeeeccccccc
Confidence 455667778889999999999999999999987 789999999999999999876543 12333333222
Q ss_pred --CCCccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEeeccCCc----------------------ccccccCC
Q 022836 128 --EASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFCHKTF----------------------AYHFEDTN 181 (291)
Q Consensus 128 --~~~~D~i~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----------------------~~~~~~~~ 181 (291)
.++||+|+++.+++|+ ++...+++++.++| |||+++++....... +.......
T Consensus 106 ~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~~~~~g~~~~~~~~~~~~~~~~~ 184 (261)
T 3iv6_A 106 ELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEYGEQSGTLAKFFDPSDKTFHFRE 184 (261)
T ss_dssp GGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHHHHTTTCHHHHEETTTTEEEGGG
T ss_pred ccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHHHHhcCCeeeeecCcccceehhh
Confidence 3789999999999987 45678999999999 999999986543110 00111134
Q ss_pred ccchhhhhccCCCCCCcHHHHHHhhc
Q 022836 182 DDDWITKYFFTGGTMPSANLLLYFQD 207 (291)
Q Consensus 182 ~~~w~~~~~~~~~~~~~~~~~~~~~~ 207 (291)
...|+.+++||+|.+|+...+.....
T Consensus 185 ~~~~i~~~~~p~g~~~~~~~~~~~~~ 210 (261)
T 3iv6_A 185 AGDVLDRALVPHGLIDKPTLLEWYRR 210 (261)
T ss_dssp TTHHHHHHCCCCTTCCHHHHHHHHHH
T ss_pred hhhHHHhccCCCCcccHHHHHHHHHh
Confidence 67899999999999998777765543
No 19
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.81 E-value=4.7e-19 Score=148.85 Aligned_cols=120 Identities=18% Similarity=0.256 Sum_probs=107.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~- 128 (291)
.....+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...+++++.++.+|+.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 8 HSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPY--VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCT
T ss_pred CCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCC
Confidence 34456667778889999999999999999999987 459999999999999999999888887899999999998766
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
++||+|++..+++|+++...+++++.++|||||++++.++..+
T Consensus 86 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 128 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAP 128 (239)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred CcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 7899999999999999999999999999999999999877654
No 20
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.80 E-value=4.7e-19 Score=146.17 Aligned_cols=117 Identities=21% Similarity=0.282 Sum_probs=105.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~ 128 (291)
.....+++.+...++ +|||+|||+|.++..+++. ++.+|+|+|+|+.+++.+++++...++ +++.++++|+.+++.+
T Consensus 31 ~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 31 IIAENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp HHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCC
Confidence 445666677776666 9999999999999999988 688999999999999999999998887 4799999999998766
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 129 -~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
++||+|++..+++|+++...+++++.++|||||.+++...
T Consensus 109 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 109 DNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEec
Confidence 8899999999999999999999999999999999999764
No 21
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.80 E-value=2.3e-19 Score=154.67 Aligned_cols=117 Identities=15% Similarity=0.177 Sum_probs=103.2
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCc-c-C
Q 022836 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFE-M-E 128 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~-~-~ 128 (291)
+..++..+... +.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ +++.++.+|+.+++ . +
T Consensus 58 l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 134 (285)
T 4htf_A 58 LDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLE 134 (285)
T ss_dssp HHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCS
T ss_pred HHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcC
Confidence 45566665544 679999999999999999987 78999999999999999999988887 58999999999987 3 3
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
++||+|++..+++|+++...+++++.++|||||++++..++..
T Consensus 135 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (285)
T 4htf_A 135 TPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAH 177 (285)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHH
T ss_pred CCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 8999999999999999999999999999999999999887653
No 22
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.80 E-value=6.2e-20 Score=160.74 Aligned_cols=204 Identities=15% Similarity=0.142 Sum_probs=142.7
Q ss_pred hhCCCCCccccccCCCCCCHHHH-------HHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCC
Q 022836 25 VLGKYFKYSCCYFSDASKTLEDA-------EKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNS 96 (291)
Q Consensus 25 ~~~~~~~y~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s 96 (291)
|+++.+.|++.++..+...+... +..+...+++.+...++.+|||||||+|.++..+++..+ ..+|+|+|+|
T Consensus 30 fl~~~~~y~~~y~~~~~~~l~~~~f~q~~~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s 109 (317)
T 1dl5_A 30 FLTKSYPLSYVYEDIVLVSYDDGEEYSTSSQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYS 109 (317)
T ss_dssp GCSSCCCHHHHTSSSCEEEEECSSCEEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESC
T ss_pred hCCchhccccCccCCCcccccCCCcceeccCHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECC
Confidence 56666666666665432122222 125667778888888999999999999999999998865 3679999999
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC--Cc
Q 022836 97 KTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK--TF 173 (291)
Q Consensus 97 ~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--~~ 173 (291)
+.+++.++++++..++++++++.+|+.+.... ++||+|++..+++++. +.+.+.|||||++++...... ..
T Consensus 110 ~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~~~~~~~ 183 (317)
T 1dl5_A 110 RKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPINLKLSRRQ 183 (317)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBCBGGGTBC
T ss_pred HHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEECCCCcccc
Confidence 99999999999998887899999999885443 7899999999999886 467889999999999865442 11
Q ss_pred ccccccCCccchhhhhccCCCCCCcHHHHHH-hhcCcEEEEeeecCCCcHHHHHHHHHH-HHHhcHHh
Q 022836 174 AYHFEDTNDDDWITKYFFTGGTMPSANLLLY-FQDDVSVVDHWLVNGKHYAQTSEEWLK-RMDNNLAS 239 (291)
Q Consensus 174 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~y~~tl~~w~~-~l~~~~~~ 239 (291)
...........|..++++|.+.+|....... ........ ....|.+|++.|.. ++.+....
T Consensus 184 ~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~-----~~~~y~~tl~~~~~~~f~~~~~~ 246 (317)
T 1dl5_A 184 PAFLFKKKDPYLVGNYKLETRFITAGGNLGNLLERNRKLL-----REFPFNREILLVRSHIFVELVDL 246 (317)
T ss_dssp EEEEEEEETTEEEEEEEEECCCCBCCGGGSCHHHHHHTTC-----CCCCEEEEEECTTHHHHHHHHHH
T ss_pred eEEEEEEeCCcEEEEEeccEEEEEccCccccccccchhhh-----hcccchhhccCcchhhhhhhhhh
Confidence 1100011234688888899887776432221 11111110 11226778888887 77655443
No 23
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.80 E-value=9.8e-19 Score=144.62 Aligned_cols=116 Identities=19% Similarity=0.298 Sum_probs=97.7
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-----CeEEEEccccCCc
Q 022836 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-----NVEIIVADISTFE 126 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~~~ 126 (291)
...+++.+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.+++++...+++ ++.++.+|+...+
T Consensus 18 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 18 MNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD 97 (217)
T ss_dssp HHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc
Confidence 34444444456778999999999999999998776689999999999999999998776663 7999999997766
Q ss_pred cC-CCccEEEEcccccccccH--HHHHHHHHhccccCeeEEEEe
Q 022836 127 ME-ASYDRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 127 ~~-~~~D~i~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~ 167 (291)
.. ++||+|++..+++|+++. ..+++++.++|||||.+++..
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 98 KRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp GGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 55 789999999999999754 899999999999999665543
No 24
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.79 E-value=1e-18 Score=146.02 Aligned_cols=118 Identities=24% Similarity=0.354 Sum_probs=102.1
Q ss_pred HHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCc
Q 022836 53 ELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASY 131 (291)
Q Consensus 53 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 131 (291)
..+++.+. ..++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.+++.+++++...+ ++.++.+|+.+.+.+++|
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~~~f 110 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDFEEKY 110 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCCCSCE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCCCCCc
Confidence 44445444 457889999999999999999999888999999999999999988875544 799999999998766899
Q ss_pred cEEEEcccccccccHH--HHHHHHHhccccCeeEEEEeeccCC
Q 022836 132 DRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 132 D~i~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
|+|++..+++++++.. .+++++.++|||||++++.++....
T Consensus 111 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 111 DMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred eEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 9999999999997655 5999999999999999998876644
No 25
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.79 E-value=9.2e-19 Score=144.93 Aligned_cols=119 Identities=20% Similarity=0.292 Sum_probs=98.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-----CeEEEEccccC
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-----NVEIIVADIST 124 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-----~v~~~~~d~~~ 124 (291)
..+..+++.+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.+++++...+++ +++++.+|+..
T Consensus 16 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 95 (219)
T 3jwg_A 16 QRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVY 95 (219)
T ss_dssp HHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSS
T ss_pred HHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccc
Confidence 3344444444446788999999999999999998876689999999999999999998776653 79999999977
Q ss_pred CccC-CCccEEEEcccccccccH--HHHHHHHHhccccCeeEEEEeec
Q 022836 125 FEME-ASYDRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 125 ~~~~-~~~D~i~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
.+.. ++||+|++..+++|+++. ..+++++.++|||||.+++ ++.
T Consensus 96 ~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~-~~~ 142 (219)
T 3jwg_A 96 RDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVS-TPN 142 (219)
T ss_dssp CCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEE-EEB
T ss_pred cccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEE-ccc
Confidence 6654 889999999999999754 7899999999999995544 443
No 26
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.79 E-value=1.1e-18 Score=150.38 Aligned_cols=119 Identities=21% Similarity=0.352 Sum_probs=105.4
Q ss_pred HHHHHHHHHc-CCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc
Q 022836 50 AMLELYCERS-RLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM 127 (291)
Q Consensus 50 ~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 127 (291)
..+..+++.+ ...++.+|||+|||+|.++..+++.+| +.+|+|+|+|+.+++.+++++...+. ++.++.+|+.+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~ 86 (284)
T 3gu3_A 8 DYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIEL 86 (284)
T ss_dssp HHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCC
T ss_pred HHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCc
Confidence 3344555444 456789999999999999999999887 48999999999999999999887765 89999999999877
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
+++||+|++..+++++++...+++++.++|||||++++.++.
T Consensus 87 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 87 NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 789999999999999999999999999999999999998876
No 27
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.79 E-value=2.6e-18 Score=139.77 Aligned_cols=113 Identities=19% Similarity=0.314 Sum_probs=100.0
Q ss_pred HHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEE
Q 022836 55 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRI 134 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i 134 (291)
+++.+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++...+++++.++.+|+.+.+..++||+|
T Consensus 24 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v 101 (199)
T 2xvm_A 24 VLEAVKVVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFI 101 (199)
T ss_dssp HHHHTTTSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEE
T ss_pred HHHHhhccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEE
Confidence 444455667789999999999999999987 789999999999999999999888887899999999987666889999
Q ss_pred EEcccccccc--cHHHHHHHHHhccccCeeEEEEeec
Q 022836 135 YSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 135 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
++..++++++ +...+++++.++|||||.+++.++.
T Consensus 102 ~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 102 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 9999999996 8899999999999999998876654
No 28
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.79 E-value=6.6e-19 Score=145.81 Aligned_cols=111 Identities=21% Similarity=0.264 Sum_probs=96.0
Q ss_pred HHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEE
Q 022836 55 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRI 134 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i 134 (291)
+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.. .++.++.+|+.+++.+++||+|
T Consensus 37 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~~~~fD~v 110 (220)
T 3hnr_A 37 ILEDVVNKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEVPTSIDTI 110 (220)
T ss_dssp HHHHHHHTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCCCSCCSEE
T ss_pred HHHHhhccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCCCCCeEEE
Confidence 333334457889999999999999999987 7899999999999999887654 3789999999998766899999
Q ss_pred EEcccccccccHHH--HHHHHHhccccCeeEEEEeeccC
Q 022836 135 YSIEMFEHMKNYQN--LLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 135 ~~~~~l~~~~~~~~--~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
++..+++++++... +++++.++|||||.+++.++...
T Consensus 111 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 149 (220)
T 3hnr_A 111 VSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFA 149 (220)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBS
T ss_pred EECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEecccc
Confidence 99999999988776 99999999999999999886543
No 29
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.78 E-value=2.4e-18 Score=141.98 Aligned_cols=111 Identities=14% Similarity=0.160 Sum_probs=96.0
Q ss_pred HHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCcc
Q 022836 54 LYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYD 132 (291)
Q Consensus 54 ~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D 132 (291)
.+++.+. ..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++ .+.+++.++.+|+.++...++||
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~~~~~~~D 109 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDWTPDRQWD 109 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSCCCSSCEE
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccCCCCCcee
Confidence 3444433 567789999999999999999988 7899999999999988876 55568999999999984448999
Q ss_pred EEEEcccccccccH--HHHHHHHHhccccCeeEEEEeecc
Q 022836 133 RIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 133 ~i~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+|++..+++|+++. ..+++++.++|||||.+++.+++.
T Consensus 110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 110 AVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 99999999999774 889999999999999999998866
No 30
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=9.7e-19 Score=148.33 Aligned_cols=117 Identities=21% Similarity=0.262 Sum_probs=103.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCC
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEA 129 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 129 (291)
+....+++.+...++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.+++.++++ .+++.++.+|+.+++.++
T Consensus 20 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~ 94 (259)
T 2p35_A 20 RPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWKPAQ 94 (259)
T ss_dssp HHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCCCSS
T ss_pred HHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcCccC
Confidence 344567777777888999999999999999999988888999999999999988876 347999999999987448
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 130 ~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
+||+|+++.+++++++...+++++.++|||||++++.+++..
T Consensus 95 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 136 (259)
T 2p35_A 95 KADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNL 136 (259)
T ss_dssp CEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCT
T ss_pred CcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCC
Confidence 899999999999999999999999999999999999987653
No 31
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.78 E-value=2.6e-18 Score=140.52 Aligned_cols=141 Identities=16% Similarity=0.235 Sum_probs=111.0
Q ss_pred hHHHhhcCCChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCC
Q 022836 9 KAKEQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNC 88 (291)
Q Consensus 9 ~~~~~~yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~ 88 (291)
+.+...||.....|...+........ . ....+..++... +.+|||+|||+|.++..+++. +.
T Consensus 3 ~~~~~~y~~~a~~y~~~~~~~~~~~~--------~----~~~~l~~~~~~~----~~~vLDiGcG~G~~~~~l~~~--~~ 64 (203)
T 3h2b_A 3 DDVSKAYSSPTFDAEALLGTVISAED--------P----DRVLIEPWATGV----DGVILDVGSGTGRWTGHLASL--GH 64 (203)
T ss_dssp CHHHHHHHCTTTCHHHHTCSSCCTTC--------T----THHHHHHHHHHC----CSCEEEETCTTCHHHHHHHHT--TC
T ss_pred HHHHHHHhhHHHHHHHHhhhhccccH--------H----HHHHHHHHhccC----CCeEEEecCCCCHHHHHHHhc--CC
Confidence 35667888887877666543222100 0 123344444332 779999999999999999987 77
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccccccc--cHHHHHHHHHhccccCeeEEE
Q 022836 89 KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 89 ~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~ 165 (291)
+|+|+|+|+.+++.++++ .+++.++.+|+.+++.+ ++||+|++..+++|++ +...+++++.++|||||.+++
T Consensus 65 ~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 65 QIEGLEPATRLVELARQT-----HPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp CEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEE
T ss_pred eEEEEeCCHHHHHHHHHh-----CCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 999999999999988876 23799999999998765 8999999999999996 899999999999999999999
Q ss_pred EeeccCC
Q 022836 166 HHFCHKT 172 (291)
Q Consensus 166 ~~~~~~~ 172 (291)
..+....
T Consensus 140 ~~~~~~~ 146 (203)
T 3h2b_A 140 SFFSGPS 146 (203)
T ss_dssp EEECCSS
T ss_pred EEccCCc
Confidence 8876543
No 32
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.78 E-value=9e-18 Score=137.53 Aligned_cols=117 Identities=15% Similarity=0.225 Sum_probs=103.0
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-C
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-A 129 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~ 129 (291)
....++..+...++.+|||+|||+|.++..+++..|..+|+++|+|+.+++.++++++..++++++++.+|+.+.... .
T Consensus 28 i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 107 (204)
T 3e05_A 28 VRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLP 107 (204)
T ss_dssp HHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSC
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCC
Confidence 335566777888999999999999999999999987799999999999999999999998887899999999775444 7
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 130 ~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+||+|++..+++ +...+++.+.+.|||||++++..+..
T Consensus 108 ~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~ 145 (204)
T 3e05_A 108 DPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTL 145 (204)
T ss_dssp CCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBH
T ss_pred CCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 899999998775 77899999999999999999976643
No 33
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.78 E-value=1e-17 Score=141.76 Aligned_cols=107 Identities=12% Similarity=0.163 Sum_probs=90.5
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH-----------------hCCCCeEEEEcccc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV-----------------LELQNVEIIVADIS 123 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-----------------~~~~~v~~~~~d~~ 123 (291)
..++.+|||+|||+|..+..|++. +.+|+|||+|+.+++.|+++... ....+++++++|+.
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 356789999999999999999987 78999999999999998765431 01247999999999
Q ss_pred CCccC--CCccEEEEcccccccc--cHHHHHHHHHhccccCeeEEEEeec
Q 022836 124 TFEME--ASYDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 124 ~~~~~--~~~D~i~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
+++.. ++||+|++..++++++ +...+++++.++|||||++++.+..
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLS 193 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 98765 7899999999999884 4677999999999999999766554
No 34
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.78 E-value=2.1e-18 Score=144.91 Aligned_cols=163 Identities=17% Similarity=0.240 Sum_probs=116.9
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC--ccC-CCccEEEEc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF--EME-ASYDRIYSI 137 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~-~~~D~i~~~ 137 (291)
..++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ +.++.+|+.+. +.+ ++||+|++.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSCTTCBSEEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcCCCCeeEEEEC
Confidence 356789999999999999999987 77999999999999887753 78899998875 434 889999999
Q ss_pred ccccccc--cHHHHHHHHHhccccCeeEEEEeeccCCcccccccCCccchhhhhccCCC-CCCcHHHHHHh--hcCcEEE
Q 022836 138 EMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGG-TMPSANLLLYF--QDDVSVV 212 (291)
Q Consensus 138 ~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~--~~~~~~~ 212 (291)
.+++|++ +...+++++.++|||||++++.+++.... ..+...+..+.. ...+...+..+ ..++.++
T Consensus 109 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~ 179 (240)
T 3dli_A 109 HFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL---------YSLINFYIDPTHKKPVHPETLKFILEYLGFRDV 179 (240)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH---------HHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEE
T ss_pred CchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh---------HHHHHHhcCccccccCCHHHHHHHHHHCCCeEE
Confidence 9999997 66999999999999999999998875432 112222223332 22333333332 2456554
Q ss_pred EeeecC---------CCcHHHHHHHHHHH-HHhcHHhHhhh
Q 022836 213 DHWLVN---------GKHYAQTSEEWLKR-MDNNLASIKPI 243 (291)
Q Consensus 213 ~~~~~~---------~~~y~~tl~~w~~~-l~~~~~~~~~~ 243 (291)
+..... +.+ .+++..|.++ +..+...+...
T Consensus 180 ~~~~~~~~~~~~~l~~~~-~~~l~~w~~~~~~~~~~~~~~~ 219 (240)
T 3dli_A 180 KIEFFEECEELTKLAKID-SNTVSEEVIRVINENIEKLNRI 219 (240)
T ss_dssp EEEEECCCCTTTSCCCCC-CSSSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccCcccccccccc-cccccHHHHHhhhhhHHHHHhh
Confidence 433221 123 5678889998 77666665544
No 35
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.78 E-value=1.3e-18 Score=156.28 Aligned_cols=111 Identities=22% Similarity=0.269 Sum_probs=98.4
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHh-----C-C--CCeEEEEccccCC------
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVL-----E-L--QNVEIIVADISTF------ 125 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-----~-~--~~v~~~~~d~~~~------ 125 (291)
..++.+|||+|||+|..+..+++.. |+.+|+|+|+|+.+++.+++++... | . +++.++.+|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 4578899999999999999999875 6789999999999999999987654 3 2 4899999999986
Q ss_pred ccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 126 EME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 126 ~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
+.+ ++||+|+++.+++++++...+++++.++|||||++++.++...
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccc
Confidence 555 7899999999999999999999999999999999999876543
No 36
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.77 E-value=4.8e-18 Score=145.40 Aligned_cols=131 Identities=16% Similarity=0.192 Sum_probs=113.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHH------HHHHHHHHHHHhCC-C
Q 022836 42 KTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKT------QKEFIEEQCRVLEL-Q 113 (291)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~------~~~~a~~~~~~~~~-~ 113 (291)
..+..++.+....+++.+...++.+|||||||+|.++..+++.+ |..+|+|+|+|+. +++.+++++...++ +
T Consensus 22 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~ 101 (275)
T 3bkx_A 22 RTIQRRQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGD 101 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGG
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCC
Confidence 45778888889999999988999999999999999999999885 5589999999997 99999999988777 5
Q ss_pred CeEEEEcc-c--cCCccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022836 114 NVEIIVAD-I--STFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 114 ~v~~~~~d-~--~~~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
+++++.+| + ..++.+ ++||+|++..+++|+++...+++.+.++++|||.+++.++....
T Consensus 102 ~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~ 164 (275)
T 3bkx_A 102 RLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQP 164 (275)
T ss_dssp GEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSC
T ss_pred ceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCC
Confidence 79999998 3 334434 78999999999999999888888888888889999998877643
No 37
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.77 E-value=2.1e-18 Score=142.47 Aligned_cols=112 Identities=13% Similarity=0.138 Sum_probs=97.5
Q ss_pred HHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEE
Q 022836 55 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRI 134 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i 134 (291)
+...+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.... +++.++++|+.+.+..++||+|
T Consensus 43 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~~~fD~v 118 (216)
T 3ofk_A 43 LRLSLSSGAVSNGLEIGCAAGAFTEKLAPH--CKRLTVIDVMPRAIGRACQRTKRW--SHISWAATDILQFSTAELFDLI 118 (216)
T ss_dssp HHHHTTTSSEEEEEEECCTTSHHHHHHGGG--EEEEEEEESCHHHHHHHHHHTTTC--SSEEEEECCTTTCCCSCCEEEE
T ss_pred HHHHcccCCCCcEEEEcCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcccC--CCeEEEEcchhhCCCCCCccEE
Confidence 333456677889999999999999999987 579999999999999999887653 3799999999998855899999
Q ss_pred EEcccccccccH---HHHHHHHHhccccCeeEEEEeecc
Q 022836 135 YSIEMFEHMKNY---QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 135 ~~~~~l~~~~~~---~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+++.+++|+++. ..+++++.++|||||.+++.++..
T Consensus 119 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 119 VVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp EEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred EEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 999999999876 567999999999999999987754
No 38
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.77 E-value=2.4e-18 Score=142.63 Aligned_cols=107 Identities=11% Similarity=0.102 Sum_probs=91.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-c--c-CCCccEEEEcc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-E--M-EASYDRIYSIE 138 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~--~-~~~~D~i~~~~ 138 (291)
++.+|||||||+|.++..+++.+|+.+|+|+|+|+.+++.+++++...+++++.++.+|+.++ + . +++||.|+++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 567999999999999999999998899999999999999999999999988899999999884 2 2 38899999985
Q ss_pred cccccc--cH------HHHHHHHHhccccCeeEEEEeec
Q 022836 139 MFEHMK--NY------QNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 139 ~l~~~~--~~------~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
+..+.+ .. ..+++.+.++|||||++++.+..
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 544332 11 25999999999999999997753
No 39
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.77 E-value=3e-18 Score=143.89 Aligned_cols=106 Identities=19% Similarity=0.213 Sum_probs=96.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcc-cc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIE-MF 140 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~-~l 140 (291)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....+. ++.++.+|+.+++.+++||+|++.. ++
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~fD~v~~~~~~l 112 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNINRKFDLITCCLDST 112 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCCSCCEEEEEECTTGG
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCccCCceEEEEcCccc
Confidence 36789999999999999999987 67999999999999999999888776 7999999999877668899999998 99
Q ss_pred ccc---ccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 141 EHM---KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 141 ~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+|+ .+...+++++.++|||||.+++..++.
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 999 678899999999999999999977654
No 40
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.77 E-value=1.6e-17 Score=144.04 Aligned_cols=109 Identities=19% Similarity=0.277 Sum_probs=96.6
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHh-C-CCCeEEEEccccCCccC-------CC
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVL-E-LQNVEIIVADISTFEME-------AS 130 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-~-~~~v~~~~~d~~~~~~~-------~~ 130 (291)
..++.+|||||||+|..+..+++.+ ++.+|+|+|+|+.+++.+++++... + .+++.++++|+.+++.. ++
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 3578999999999999999999875 7899999999999999999998876 2 35899999999987643 48
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
||+|++..+++|+ ++..+++++.++|||||.+++.....
T Consensus 114 fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~ 152 (299)
T 3g5t_A 114 IDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYAD 152 (299)
T ss_dssp EEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred eeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 9999999999999 99999999999999999999855543
No 41
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.77 E-value=1.2e-17 Score=135.14 Aligned_cols=110 Identities=15% Similarity=0.238 Sum_probs=96.7
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---CCCccEEEEcc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---EASYDRIYSIE 138 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---~~~~D~i~~~~ 138 (291)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.++++++..++++++++++|+.+... .++||+|+++.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 56889999999999999988875 356899999999999999999999888789999999988642 37899999999
Q ss_pred ccccc-ccHHHHHHHHHh--ccccCeeEEEEeeccCC
Q 022836 139 MFEHM-KNYQNLLKKISK--WMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 139 ~l~~~-~~~~~~l~~~~~--~LkpgG~l~~~~~~~~~ 172 (291)
++++. ++...+++.+.+ +|+|||++++.......
T Consensus 122 p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 122 PYNVDSADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp CTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred CCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 98876 778899999999 99999999998876544
No 42
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.76 E-value=1.9e-18 Score=145.23 Aligned_cols=105 Identities=19% Similarity=0.285 Sum_probs=93.2
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccccc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 141 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~l~ 141 (291)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++... ++.++.+|+.+...+++||+|++..+++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~~~~~~fD~v~~~~~l~ 114 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEH--FNDITCVEASEEAISHAQGRLKD----GITYIHSRFEDAQLPRRYDNIVLTHVLE 114 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTT--CSCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGCCCSSCEEEEEEESCGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHh--CCcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHcCcCCcccEEEEhhHHH
Confidence 46779999999999999999987 45899999999999998876532 7999999999885458899999999999
Q ss_pred ccccHHHHHHHHH-hccccCeeEEEEeeccCC
Q 022836 142 HMKNYQNLLKKIS-KWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 142 ~~~~~~~~l~~~~-~~LkpgG~l~~~~~~~~~ 172 (291)
|++++..+++++. ++|||||++++.+++...
T Consensus 115 ~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~ 146 (250)
T 2p7i_A 115 HIDDPVALLKRINDDWLAEGGRLFLVCPNANA 146 (250)
T ss_dssp GCSSHHHHHHHHHHTTEEEEEEEEEEEECTTC
T ss_pred hhcCHHHHHHHHHHHhcCCCCEEEEEcCChHH
Confidence 9999999999999 999999999999886543
No 43
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.76 E-value=1.6e-18 Score=146.98 Aligned_cols=110 Identities=15% Similarity=0.194 Sum_probs=92.3
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-C
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-A 129 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~ 129 (291)
.++.+.+.. ..+.+|||||||+|.++..|++. +.+|+|+|+|+.|++.|++ .+++.++++|+++++.+ +
T Consensus 29 l~~~l~~~~--~~~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~------~~~v~~~~~~~e~~~~~~~ 98 (257)
T 4hg2_A 29 LFRWLGEVA--PARGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALR------HPRVTYAVAPAEDTGLPPA 98 (257)
T ss_dssp HHHHHHHHS--SCSSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCC------CTTEEEEECCTTCCCCCSS
T ss_pred HHHHHHHhc--CCCCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhh------cCCceeehhhhhhhcccCC
Confidence 344454443 34569999999999999999987 6799999999999877653 24899999999998877 8
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 130 ~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
+||+|+|..++|++ +..++++++.++|||||+|++...+..
T Consensus 99 sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 99 SVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred cccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 99999999999887 578899999999999999998776554
No 44
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.76 E-value=4.5e-18 Score=146.07 Aligned_cols=113 Identities=24% Similarity=0.327 Sum_probs=99.5
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCcc
Q 022836 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYD 132 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D 132 (291)
..+++.+...++.+|||||||+|.++..+++ ++.+|+|+|+|+.+++.++++. +++.++.+|+.+++.+++||
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~fD 119 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRVDKPLD 119 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCCSSCEE
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCcCCCcC
Confidence 3455566677889999999999999999997 4889999999999999887754 47889999999987668999
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022836 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 133 ~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
+|++..+++++++...+++++.++|||||++++..+....
T Consensus 120 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~ 159 (279)
T 3ccf_A 120 AVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGN 159 (279)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTT
T ss_pred EEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcc
Confidence 9999999999999999999999999999999998876543
No 45
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.76 E-value=1e-17 Score=133.84 Aligned_cols=115 Identities=13% Similarity=0.078 Sum_probs=97.8
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCC-ccC
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTF-EME 128 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~-~~~ 128 (291)
....+++.+...++.+|||+|||+|.++..+++.+|+.+|+++|+|+.+++.+++++...+++ ++ ++.+|..+. +..
T Consensus 13 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~ 91 (178)
T 3hm2_A 13 VRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV 91 (178)
T ss_dssp HHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC
T ss_pred HHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc
Confidence 335566667778899999999999999999998888899999999999999999999988886 78 888888553 332
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 -~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
++||+|++..++++ ..+++.+.+.|||||++++..+..
T Consensus 92 ~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp CSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred CCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeecc
Confidence 78999999999876 678999999999999999977644
No 46
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.75 E-value=1.2e-17 Score=143.98 Aligned_cols=106 Identities=22% Similarity=0.352 Sum_probs=95.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccccc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 141 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~l~ 141 (291)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ ++.++.+|+.+.+..++||+|+++.+++
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANIQENYDFIVSTVVFM 195 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCCCSCEEEEEECSSGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccccCCccEEEEccchh
Confidence 46889999999999999999987 77999999999999999999998888 8999999999977678999999999999
Q ss_pred cc--ccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 142 HM--KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 142 ~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
|+ ++...+++++.++|||||.+++.....
T Consensus 196 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 226 (286)
T 3m70_A 196 FLNRERVPSIIKNMKEHTNVGGYNLIVAAMS 226 (286)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred hCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 98 456799999999999999987765533
No 47
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.75 E-value=9.3e-18 Score=133.29 Aligned_cols=108 Identities=19% Similarity=0.276 Sum_probs=93.1
Q ss_pred HHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccE
Q 022836 55 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDR 133 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~ 133 (291)
+++.+...++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.++++ .+++.+..+| .+.+ ++||+
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d---~~~~~~~~D~ 78 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK-----FDSVITLSDP---KEIPDNSVDF 78 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH-----CTTSEEESSG---GGSCTTCEEE
T ss_pred HHHhcCcCCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC---CCCCCCceEE
Confidence 3444456788899999999999999999874 4999999999999988876 3489999999 3333 78999
Q ss_pred EEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022836 134 IYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 134 i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
|++..+++++++...+++++.+.|||||++++.++....
T Consensus 79 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 117 (170)
T 3i9f_A 79 ILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKEN 117 (170)
T ss_dssp EEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred EEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccc
Confidence 999999999999999999999999999999998876554
No 48
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.75 E-value=4e-18 Score=142.69 Aligned_cols=116 Identities=17% Similarity=0.185 Sum_probs=98.6
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCC
Q 022836 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~ 130 (291)
+..++.....++ .+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...+. .++.++.+|+.+++..++
T Consensus 56 l~~~~~~~~~~~-~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 132 (235)
T 3lcc_A 56 IVHLVDTSSLPL-GRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTEL 132 (235)
T ss_dssp HHHHHHTTCSCC-EEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSC
T ss_pred HHHHHHhcCCCC-CCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCC
Confidence 344455444444 49999999999999999864 88999999999999999998876433 479999999999876689
Q ss_pred ccEEEEcccccccc--cHHHHHHHHHhccccCeeEEEEeecc
Q 022836 131 YDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~i~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
||+|++..++++++ +...+++++.++|||||.+++..+..
T Consensus 133 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 133 FDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp EEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred eeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 99999999999997 88999999999999999999877654
No 49
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.75 E-value=8.3e-18 Score=145.31 Aligned_cols=113 Identities=21% Similarity=0.292 Sum_probs=96.5
Q ss_pred HHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC----CCeEEEEccccCCc---cC
Q 022836 56 CERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL----QNVEIIVADISTFE---ME 128 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~v~~~~~d~~~~~---~~ 128 (291)
.+.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++....+. .++.+..+|+.+++ .+
T Consensus 50 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 127 (293)
T 3thr_A 50 LGLLRQHGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPA 127 (293)
T ss_dssp HHHHHHTTCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCC
T ss_pred HHHhcccCCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccccc
Confidence 33333456789999999999999999987 67999999999999999988754332 36889999998876 34
Q ss_pred -CCccEEEEc-cccccccc-------HHHHHHHHHhccccCeeEEEEeecc
Q 022836 129 -ASYDRIYSI-EMFEHMKN-------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 -~~~D~i~~~-~~l~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
++||+|+|. .+++|+.+ ...+++++.++|||||++++..++.
T Consensus 128 ~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 128 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp TTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 899999998 89999988 9999999999999999999988764
No 50
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.75 E-value=1.2e-17 Score=141.83 Aligned_cols=104 Identities=13% Similarity=0.247 Sum_probs=93.9
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcc
Q 022836 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIE 138 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~ 138 (291)
...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++ ..+.+++.++.+|+.+++.+ ++||+|++..
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLPDESVHGVIVVH 112 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCCCCCeeEEEECC
Confidence 4567889999999999999999976 789999999999999999887 33345899999999988765 7899999999
Q ss_pred cccccccHHHHHHHHHhccccCeeEEEE
Q 022836 139 MFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 139 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+++++++...+++++.++|||||.+++.
T Consensus 113 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 113 LWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 9999999999999999999999999987
No 51
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.75 E-value=7.3e-19 Score=147.42 Aligned_cols=157 Identities=10% Similarity=0.028 Sum_probs=110.3
Q ss_pred hHHHhhcCCChHHHHHhhCCCCCccc--c-ccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC
Q 022836 9 KAKEQHYELPTSFFKLVLGKYFKYSC--C-YFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY 85 (291)
Q Consensus 9 ~~~~~~yd~~~~~~~~~~~~~~~y~~--~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~ 85 (291)
...+.+|+.++++...|......|.. . +.......+.......+..+...+ ..++.+|||||||+|.++..+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~Yd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~ 82 (236)
T 1zx0_A 4 PSATPIFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAP 82 (236)
T ss_dssp ----CCSCTTCBCHHHHTTSCEEECTTSCEEEETTEEEEEGGGHHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSC
T ss_pred CCCCCccCCcCCCchhhhcchhhcCCccchhhccchHHHHHHHHHHHHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcC
Confidence 34456889999999988887777742 1 111111111112223334443333 4578899999999999999997643
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC--ccC-CCccEEEE-cccc----cccccHHHHHHHHHhcc
Q 022836 86 SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF--EME-ASYDRIYS-IEMF----EHMKNYQNLLKKISKWM 157 (291)
Q Consensus 86 ~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~-~~~D~i~~-~~~l----~~~~~~~~~l~~~~~~L 157 (291)
..+|+|+|+|+.+++.|+++....+ .++.++.+|+.++ +.+ ++||+|++ ...+ .+..+...+++++.++|
T Consensus 83 -~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~L 160 (236)
T 1zx0_A 83 -IDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLL 160 (236)
T ss_dssp -EEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHE
T ss_pred -CCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhc
Confidence 4589999999999999999887666 3799999999987 555 78999999 4443 12244567899999999
Q ss_pred ccCeeEEEEee
Q 022836 158 KEDTLLFVHHF 168 (291)
Q Consensus 158 kpgG~l~~~~~ 168 (291)
||||++++...
T Consensus 161 kpgG~l~~~~~ 171 (236)
T 1zx0_A 161 KPGGVLTYCNL 171 (236)
T ss_dssp EEEEEEEECCH
T ss_pred CCCeEEEEEec
Confidence 99999988554
No 52
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.75 E-value=8.5e-18 Score=142.06 Aligned_cols=122 Identities=15% Similarity=0.173 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC
Q 022836 45 EDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST 124 (291)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 124 (291)
..........+++.+...++.+|||||||+|.++..+++.. ..+|+++|+|+.+++.+++++... +++.++.+|+.+
T Consensus 75 ~~~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~ 151 (254)
T 1xtp_A 75 HDVDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMET 151 (254)
T ss_dssp HHHHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGG
T ss_pred CHHHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHH
Confidence 34444555677777777788999999999999999999875 568999999999999999876543 479999999998
Q ss_pred CccC-CCccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEeec
Q 022836 125 FEME-ASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 125 ~~~~-~~~D~i~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
++.+ ++||+|++..+++|+ .+...+++++.++|||||++++.++.
T Consensus 152 ~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 199 (254)
T 1xtp_A 152 ATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENC 199 (254)
T ss_dssp CCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 7765 789999999999999 56889999999999999999998763
No 53
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.75 E-value=2.1e-17 Score=137.21 Aligned_cols=120 Identities=19% Similarity=0.273 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC
Q 022836 46 DAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF 125 (291)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 125 (291)
+......+.+.+.+ .++.+|||+|||+|.++..+++.. .+++++|+|+.+++.++++....+ .++.++.+|+.++
T Consensus 23 ~~~~~~~~~l~~~~--~~~~~vLDlG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~ 97 (227)
T 1ve3_A 23 SRIETLEPLLMKYM--KKRGKVLDLACGVGGFSFLLEDYG--FEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKL 97 (227)
T ss_dssp HHHHHHHHHHHHSC--CSCCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSC
T ss_pred HHHHHHHHHHHHhc--CCCCeEEEEeccCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcC
Confidence 33344445554443 347899999999999999999874 499999999999999999988776 4899999999987
Q ss_pred ccC-CCccEEEEccc--ccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 126 EME-ASYDRIYSIEM--FEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 126 ~~~-~~~D~i~~~~~--l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+.+ ++||+|+++.+ +++..+...+++++.++|||||.+++..++.
T Consensus 98 ~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 98 SFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp CSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 655 78999999999 6666788899999999999999999988764
No 54
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.75 E-value=2.5e-18 Score=144.52 Aligned_cols=107 Identities=12% Similarity=0.168 Sum_probs=94.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEccccc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFE 141 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~l~ 141 (291)
++.+|||||||+|.++..+++.. ..+|+++|+|+.+++.+++++...+..++.++.+|+.+++.+ ++||+|++..+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 68899999999999999998775 569999999999999999988765444689999999887765 6899999999999
Q ss_pred cccc--HHHHHHHHHhccccCeeEEEEeecc
Q 022836 142 HMKN--YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 142 ~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
++++ ...+++++.++|||||++++.++..
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 9977 4589999999999999999987754
No 55
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.75 E-value=2.8e-17 Score=132.75 Aligned_cols=117 Identities=15% Similarity=0.314 Sum_probs=102.4
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCC--eEEEEccccCCccCC
Q 022836 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQN--VEIIVADISTFEMEA 129 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~--v~~~~~d~~~~~~~~ 129 (291)
...+++.+...++.+|||+|||+|.++..+++. +.+|+++|+++.+++.+++++...++++ +.++.+|+.+....+
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDR 118 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTS
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccC
Confidence 445666667778899999999999999999987 7899999999999999999999888865 999999998854457
Q ss_pred CccEEEEcccccc-cccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 130 SYDRIYSIEMFEH-MKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 130 ~~D~i~~~~~l~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+||+|+++.++++ ..+...+++.+.++|+|||.+++..+..
T Consensus 119 ~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 119 KYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp CEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred CceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 8999999998887 4677899999999999999999988754
No 56
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.74 E-value=8.7e-18 Score=138.23 Aligned_cols=109 Identities=16% Similarity=0.249 Sum_probs=94.1
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCc
Q 022836 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASY 131 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 131 (291)
+..++.. ..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++. ++.++.+|+.+++..++|
T Consensus 34 ~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~~~~~f 103 (211)
T 3e23_A 34 LTKFLGE--LPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLDAIDAY 103 (211)
T ss_dssp HHHHHTT--SCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCCCCSCE
T ss_pred HHHHHHh--cCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCCCCCcE
Confidence 4444443 346889999999999999999987 779999999999999998876 467888999988755899
Q ss_pred cEEEEcccccccc--cHHHHHHHHHhccccCeeEEEEeecc
Q 022836 132 DRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 132 D~i~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
|+|++..+++|++ +...+++++.++|||||++++..+..
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 144 (211)
T 3e23_A 104 DAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSG 144 (211)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 9999999999997 78899999999999999999987644
No 57
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.74 E-value=6.9e-18 Score=143.61 Aligned_cols=114 Identities=16% Similarity=0.250 Sum_probs=99.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~- 128 (291)
.....+++.+...++.+|||||||+|.++..+++ ++.+|+|+|+|+.+++.++++. ++.++.+|+.+++.+
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~~~~ 92 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLALPD 92 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCCSCT
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCCCCC
Confidence 3456666777778899999999999999999997 4889999999999887665432 799999999998766
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
++||+|++..+++|+++...+++++.++|| ||++++.++....
T Consensus 93 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 93 KSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp TCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred CCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCch
Confidence 899999999999999999999999999999 9999988876543
No 58
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.74 E-value=4e-17 Score=137.88 Aligned_cols=118 Identities=15% Similarity=0.320 Sum_probs=99.8
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 128 (291)
...+..++......++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...+. ++.++++|+.+++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~~ 103 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAFK 103 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCCC
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhcccC
Confidence 345566666666677889999999999999999986 78999999999999999999988776 799999999987766
Q ss_pred CCccEEEEcc-ccccc--ccHHHHHHHHHhccccCeeEEEEeec
Q 022836 129 ASYDRIYSIE-MFEHM--KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 129 ~~~D~i~~~~-~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
++||+|++.. .+++. .+...+++++.++|||||.+++..++
T Consensus 104 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 104 NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 8899999864 34444 46788999999999999999987765
No 59
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.74 E-value=3e-17 Score=141.91 Aligned_cols=109 Identities=17% Similarity=0.177 Sum_probs=95.8
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc--CCCccEEEEc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM--EASYDRIYSI 137 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~--~~~~D~i~~~ 137 (291)
..++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.++++....+. .++.++.+|+.+.+. +++||+|++.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 4678899999999999999988762 45999999999999999999887766 469999999998765 3789999999
Q ss_pred ccccc----cccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 138 EMFEH----MKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 138 ~~l~~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
.++++ ..+...+++++.++|||||.+++.+++.
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 99977 4678899999999999999999988765
No 60
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.74 E-value=2.8e-17 Score=135.06 Aligned_cols=112 Identities=18% Similarity=0.120 Sum_probs=99.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~- 128 (291)
.....+++.+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++...++++++++.+|+.+....
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 141 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQAR 141 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccC
Confidence 44556677778889999999999999999999988 789999999999999999999988887899999999886544
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
++||+|++..+++++.+ .+.+.|||||++++..+.
T Consensus 142 ~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 78999999999998875 588999999999998776
No 61
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.74 E-value=2.1e-17 Score=138.59 Aligned_cols=106 Identities=23% Similarity=0.328 Sum_probs=94.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~l 140 (291)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++. ...++.++.+|+.+++.+ ++||+|++..++
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 126 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPFENEQFEAIMAINSL 126 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSSCTTCEEEEEEESCT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCCCCCCccEEEEcChH
Confidence 46789999999999999999987 789999999999998887764 224799999999998765 899999999999
Q ss_pred cccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022836 141 EHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
+|+++...+++++.++|+|||++++.+++...
T Consensus 127 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 158 (242)
T 3l8d_A 127 EWTEEPLRALNEIKRVLKSDGYACIAILGPTA 158 (242)
T ss_dssp TSSSCHHHHHHHHHHHEEEEEEEEEEEECTTC
T ss_pred hhccCHHHHHHHHHHHhCCCeEEEEEEcCCcc
Confidence 99999999999999999999999998876543
No 62
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.74 E-value=6.3e-17 Score=132.66 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=96.2
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC-CC
Q 022836 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-AS 130 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-~~ 130 (291)
..++..+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.++++++..+++ +++++.+|+.+.... ..
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~ 122 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPL 122 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCC
T ss_pred HHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCC
Confidence 34566677888999999999999999999987 889999999999999999999999986 899999999984333 68
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
||+|++...+ +.. +++.+.+.|||||++++..+..
T Consensus 123 ~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 123 PEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp CSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSH
T ss_pred CCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCc
Confidence 9999988754 456 9999999999999999987643
No 63
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.74 E-value=2.3e-17 Score=135.61 Aligned_cols=108 Identities=15% Similarity=0.159 Sum_probs=92.9
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CC
Q 022836 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-AS 130 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 130 (291)
..++..+.. ++.+|||+|||+|.++..+ +. +|+|+|+|+.+++.++++. +++.++.+|+.+++.+ ++
T Consensus 27 ~~~l~~~~~-~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~ 95 (211)
T 2gs9_A 27 ERALKGLLP-PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPFPGES 95 (211)
T ss_dssp HHHHHTTCC-CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCSCSSC
T ss_pred HHHHHHhcC-CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCCCCCc
Confidence 344444433 7889999999999998877 44 9999999999999888765 4789999999988765 78
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
||+|++..+++|+++...+++++.++|||||.+++.+++..
T Consensus 96 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 96 FDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp EEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 99999999999999999999999999999999999988654
No 64
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.73 E-value=7.2e-18 Score=146.76 Aligned_cols=113 Identities=17% Similarity=0.201 Sum_probs=99.5
Q ss_pred CCCCCCEEEEEcCCcchHHHHHH-HHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCccEEEEc
Q 022836 60 RLEDGHTVLDVGCGWGSLSLYIA-QKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSI 137 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~la-~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~~ 137 (291)
...++.+|||||||+|..+..++ ...|+.+|+|+|+|+.+++.+++++...++. +++++++|+.+++.+++||+|+++
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~ 194 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSN 194 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECC
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEEC
Confidence 35678999999999999999986 4567889999999999999999999887774 599999999998766899999999
Q ss_pred ccccccccHHH---HHHHHHhccccCeeEEEEeeccCC
Q 022836 138 EMFEHMKNYQN---LLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 138 ~~l~~~~~~~~---~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
.+++|+++... +++++.++|||||++++.++....
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 232 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPP 232 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCT
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCC
Confidence 99999977665 799999999999999998776543
No 65
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.73 E-value=2.4e-17 Score=135.16 Aligned_cols=110 Identities=25% Similarity=0.278 Sum_probs=95.0
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEccc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEM 139 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~ 139 (291)
..++.+|||+|||+|..+..++.. ++.+|+|+|+|+.+++.+++++...+. ++.++.+|+.+++.+ ++||+|++..+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNF-KLNISKGDIRKLPFKDESMSFVYSYGT 98 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTC-CCCEEECCTTSCCSCTTCEEEEEECSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEECchhhCCCCCCceeEEEEcCh
Confidence 356789999999999985544434 378999999999999999999887764 799999999998765 78999999999
Q ss_pred cccc--ccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022836 140 FEHM--KNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 140 l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
++|+ .+...+++++.++|||||++++.+++...
T Consensus 99 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 133 (209)
T 2p8j_A 99 IFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKD 133 (209)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTS
T ss_pred HHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccc
Confidence 9999 78899999999999999999999887654
No 66
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.73 E-value=3.4e-17 Score=131.88 Aligned_cols=108 Identities=14% Similarity=0.150 Sum_probs=89.1
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cCCCccEEEEc
Q 022836 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--MEASYDRIYSI 137 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~i~~~ 137 (291)
...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++..+++++++++.+...+. .+++||+|+++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 3567899999999999999999987 8899999999999999999999988878999998887753 23789999987
Q ss_pred c-cccc--------cccHHHHHHHHHhccccCeeEEEEeec
Q 022836 138 E-MFEH--------MKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 138 ~-~l~~--------~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
. .+.+ ..+...+++++.++|||||.+++..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 3 2222 144567899999999999999987653
No 67
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.73 E-value=2.1e-17 Score=138.66 Aligned_cols=112 Identities=13% Similarity=0.208 Sum_probs=97.0
Q ss_pred HHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCc
Q 022836 54 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASY 131 (291)
Q Consensus 54 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~ 131 (291)
.+...+...++.+|||+|||+|.++..+++. +. +|+|+|+|+.+++.++++... .++.++.+|+.+.+.+ ++|
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~~~~~f 108 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLHLPQDSF 108 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCCCCTTCE
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhccCCCCCc
Confidence 3445566668899999999999999999987 55 999999999999988876432 3699999999987765 789
Q ss_pred cEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 132 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 132 D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
|+|++..+++++++...+++++.++|||||++++.++..
T Consensus 109 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 147 (243)
T 3bkw_A 109 DLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHP 147 (243)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred eEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCc
Confidence 999999999999999999999999999999999988654
No 68
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.73 E-value=5.9e-17 Score=133.69 Aligned_cols=107 Identities=19% Similarity=0.274 Sum_probs=93.4
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cC-CCccEEEEcc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--ME-ASYDRIYSIE 138 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~-~~~D~i~~~~ 138 (291)
.++.+|||||||+|.++..+++..|+.+|+|+|+|+.+++.+++++...+++++.++.+|+.+++ .+ ++||+|+++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 45789999999999999999999888999999999999999999999988888999999999865 33 7899999997
Q ss_pred cccccc--------cHHHHHHHHHhccccCeeEEEEee
Q 022836 139 MFEHMK--------NYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 139 ~l~~~~--------~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
+..+.. ....+++.+.++|+|||.+++.+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 654432 236799999999999999998653
No 69
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.73 E-value=2e-17 Score=143.06 Aligned_cols=118 Identities=19% Similarity=0.197 Sum_probs=90.6
Q ss_pred HHHHHHcC-CCCCCEEEEEcCCcchHHHH----HHHHCCCCEE--EEEcCCHHHHHHHHHHHHHh-CCCCeE--EEEccc
Q 022836 53 ELYCERSR-LEDGHTVLDVGCGWGSLSLY----IAQKYSNCKI--TGICNSKTQKEFIEEQCRVL-ELQNVE--IIVADI 122 (291)
Q Consensus 53 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~----la~~~~~~~v--~~vD~s~~~~~~a~~~~~~~-~~~~v~--~~~~d~ 122 (291)
..++..++ ..++.+|||||||+|.++.. ++.++|+..| +|+|+|++|++.+++++... +++++. +..+++
T Consensus 41 ~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~ 120 (292)
T 2aot_A 41 PGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETS 120 (292)
T ss_dssp HHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCH
T ss_pred hhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecch
Confidence 33333333 35678999999999986653 3445566754 99999999999999987653 445554 456666
Q ss_pred cCCc------c-CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 123 STFE------M-EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 123 ~~~~------~-~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
.+++ . +++||+|++..+++|++|+.++++++.++|||||++++.....
T Consensus 121 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 121 SEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp HHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred hhhhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 5543 2 3789999999999999999999999999999999999986643
No 70
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.73 E-value=5.5e-18 Score=134.83 Aligned_cols=113 Identities=12% Similarity=0.250 Sum_probs=94.7
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCcc
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM 127 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~ 127 (291)
+.....+...+ .+..+|||||||+|.++..++...|+++|+++|+|+.|++.+++++...|.. ++.+ +|.....+
T Consensus 37 d~fY~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~ 112 (200)
T 3fzg_A 37 NDFYTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVY 112 (200)
T ss_dssp HHHHHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHT
T ss_pred HHHHHHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCC
Confidence 33445555544 4577999999999999999998888999999999999999999999998885 5666 66665555
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEE
Q 022836 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 165 (291)
+++||+|++..++|++++.+..+.++.+.|+|||+++-
T Consensus 113 ~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 113 KGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp TSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEE
T ss_pred CCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEE
Confidence 58899999999999997777788899999999998654
No 71
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.72 E-value=1.3e-17 Score=144.19 Aligned_cols=106 Identities=19% Similarity=0.360 Sum_probs=90.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC------------------------------
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL------------------------------ 112 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------------------------------ 112 (291)
++.+|||||||+|.++..+++.+++.+|+|+|+|+.+++.|++++...+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 67899999999999999999998889999999999999999987654331
Q ss_pred ----------------------------CCeEEEEccccCCc------cCCCccEEEEcccccccc------cHHHHHHH
Q 022836 113 ----------------------------QNVEIIVADISTFE------MEASYDRIYSIEMFEHMK------NYQNLLKK 152 (291)
Q Consensus 113 ----------------------------~~v~~~~~d~~~~~------~~~~~D~i~~~~~l~~~~------~~~~~l~~ 152 (291)
.++.|+++|+.... ..++||+|+|..+++|+. +...++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 37999999998654 237899999999998775 77889999
Q ss_pred HHhccccCeeEEEEee
Q 022836 153 ISKWMKEDTLLFVHHF 168 (291)
Q Consensus 153 ~~~~LkpgG~l~~~~~ 168 (291)
+.++|||||+|++...
T Consensus 206 ~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHEEEEEEEEEECC
T ss_pred HHHHhCCCcEEEEecC
Confidence 9999999999998643
No 72
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.72 E-value=7.7e-18 Score=139.61 Aligned_cols=201 Identities=16% Similarity=0.159 Sum_probs=132.7
Q ss_pred cccchhHHHhhcCCChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHH
Q 022836 4 AIQTDKAKEQHYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQ 83 (291)
Q Consensus 4 ~~~~~~~~~~~yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~ 83 (291)
+......+..+||...+.|......... ..........+++.+...++.+|||+|||+|.++..+++
T Consensus 6 m~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~ 72 (227)
T 3e8s_A 6 MRNPEDALLDSWHQNAQAWIDAVRHGAI-------------ESRRQVTDQAILLAILGRQPERVLDLGCGEGWLLRALAD 72 (227)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHTCC-------------HHHHHTHHHHHHHHHHHTCCSEEEEETCTTCHHHHHHHT
T ss_pred hhcHHHHHHHHHHhhHHHHHHHhccccc-------------ccccccccHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHH
Confidence 3455567778888766666554322111 111111223344444445678999999999999999998
Q ss_pred HCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC---ccC--CCccEEEEcccccccccHHHHHHHHHhccc
Q 022836 84 KYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF---EME--ASYDRIYSIEMFEHMKNYQNLLKKISKWMK 158 (291)
Q Consensus 84 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~~~--~~~D~i~~~~~l~~~~~~~~~l~~~~~~Lk 158 (291)
. +.+|+|+|+|+.+++.++++ .++.+..+|+.++ +.. .+||+|++..+++ ..+...+++++.++||
T Consensus 73 ~--~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~ 143 (227)
T 3e8s_A 73 R--GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQDIIELLSAMRTLLV 143 (227)
T ss_dssp T--TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEE
T ss_pred C--CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhcccccccCCCccEEEECchhh-hhhHHHHHHHHHHHhC
Confidence 7 77999999999999888775 2677888888776 322 5699999999998 8889999999999999
Q ss_pred cCeeEEEEeeccCCcccccccCCccchhhhhccCCCCCCcHHHHHHhhcCcEEEEeeecCCCcHHHHHHHHHHHHHhcHH
Q 022836 159 EDTLLFVHHFCHKTFAYHFEDTNDDDWITKYFFTGGTMPSANLLLYFQDDVSVVDHWLVNGKHYAQTSEEWLKRMDNNLA 238 (291)
Q Consensus 159 pgG~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~tl~~w~~~l~~~~~ 238 (291)
|||++++.+++........ -...|....+..- ..... ....+..+..+|.+.|.++||
T Consensus 144 pgG~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~------------~~~~~-------~~~~~~~~~~~~~~~l~~aGf 201 (227)
T 3e8s_A 144 PGGALVIQTLHPWSVADGD---YQDGWREESFAGF------------AGDWQ-------PMPWYFRTLASWLNALDMAGL 201 (227)
T ss_dssp EEEEEEEEECCTTTTCTTC---CSCEEEEECCTTS------------SSCCC-------CEEEEECCHHHHHHHHHHTTE
T ss_pred CCeEEEEEecCccccCccc---cccccchhhhhcc------------ccCcc-------cceEEEecHHHHHHHHHHcCC
Confidence 9999999988765432210 0122221110000 00000 001123478899999999999
Q ss_pred hHhhhHHhcc
Q 022836 239 SIKPIMESTY 248 (291)
Q Consensus 239 ~~~~~~~~~~ 248 (291)
++.+..++..
T Consensus 202 ~~~~~~~~~~ 211 (227)
T 3e8s_A 202 RLVSLQEPQH 211 (227)
T ss_dssp EEEEEECCCC
T ss_pred eEEEEecCCC
Confidence 9887644333
No 73
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.72 E-value=2.5e-16 Score=140.66 Aligned_cols=119 Identities=18% Similarity=0.178 Sum_probs=104.4
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCC
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEA 129 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~ 129 (291)
....+++.++..++.+|||+|||+|.++..+++.+|+.+++++|+ +.+++.+++++...++ ++++++.+|+.+ +.+.
T Consensus 190 ~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~~p~ 267 (369)
T 3gwz_A 190 EAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-TIPD 267 (369)
T ss_dssp HHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-CCCS
T ss_pred hHHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-CCCC
Confidence 345667777778889999999999999999999999999999999 9999999999988887 579999999984 3334
Q ss_pred CccEEEEcccccccccHH--HHHHHHHhccccCeeEEEEeeccC
Q 022836 130 SYDRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 130 ~~D~i~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
.||+|++..+++++++.. ++++++.+.|||||++++.++..+
T Consensus 268 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 268 GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 899999999999997665 799999999999999999887554
No 74
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.72 E-value=3.5e-17 Score=136.39 Aligned_cols=108 Identities=23% Similarity=0.431 Sum_probs=96.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-----CCeEEEEccccCCccC-CCccEEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-----QNVEIIVADISTFEME-ASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~-~~~D~i~ 135 (291)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ .++.++.+|+..++.+ ++||+|+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 47889999999999999999987 78999999999999999998876665 2589999999998765 8899999
Q ss_pred EcccccccccHH---HHHHHHHhccccCeeEEEEeeccC
Q 022836 136 SIEMFEHMKNYQ---NLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 136 ~~~~l~~~~~~~---~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
+..+++++++.. .+++++.++|||||++++.++...
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 999999998877 899999999999999999887653
No 75
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.72 E-value=1.6e-16 Score=139.81 Aligned_cols=119 Identities=19% Similarity=0.296 Sum_probs=103.8
Q ss_pred HHHHHHHcCC--CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC
Q 022836 52 LELYCERSRL--EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME 128 (291)
Q Consensus 52 ~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~ 128 (291)
...+++.++. .++.+|||+|||+|..+..+++.+|+.+++++|++ .+++.+++++...+++ +++++.+|+.+.+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 230 (335)
T 2r3s_A 152 AQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYG 230 (335)
T ss_dssp HHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC
T ss_pred HHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCC
Confidence 3456666666 77899999999999999999999988999999999 9999999999888874 699999999986655
Q ss_pred CCccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 129 ASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
..||+|++..+++++ ++...+++++.+.|+|||++++.++...
T Consensus 231 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 231 NDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred CCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 569999999999999 4557899999999999999999877543
No 76
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.72 E-value=1.2e-16 Score=136.93 Aligned_cols=150 Identities=11% Similarity=0.106 Sum_probs=111.2
Q ss_pred hHHHHHhhCCCCCccc-----cccCC---CCCCHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCc---chHHHHHHHHCC
Q 022836 19 TSFFKLVLGKYFKYSC-----CYFSD---ASKTLEDAEKAMLELYCERSR-LEDGHTVLDVGCGW---GSLSLYIAQKYS 86 (291)
Q Consensus 19 ~~~~~~~~~~~~~y~~-----~~~~~---~~~~l~~~~~~~~~~~~~~~~-~~~~~~vLDiGcG~---G~~~~~la~~~~ 86 (291)
..+|..+++...+|.. ..+.. ........+...+..+++.+. ..+..+|||||||+ |.++..+++..|
T Consensus 24 ar~~d~~l~g~~~~~~d~~~~~~~~~~~p~~~~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p 103 (274)
T 2qe6_A 24 ARVYDALLGGKDNFEADRALADYACKHIPGLKESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNP 103 (274)
T ss_dssp HHHHHHHTTCSSCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCT
T ss_pred HHHHHHhcCCccCCHHHHHHHHHHHHhcchhHHHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCC
Confidence 5677777776555421 00000 001123334445555555554 34457999999999 998888877788
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-----------cC-CCccEEEEccccccccc--HHHHHHH
Q 022836 87 NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-----------ME-ASYDRIYSIEMFEHMKN--YQNLLKK 152 (291)
Q Consensus 87 ~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-----------~~-~~~D~i~~~~~l~~~~~--~~~~l~~ 152 (291)
+.+|+++|+|+.|++.+++++.. .+++.++.+|+.+.. .+ .+||+|++..++||+++ ...++++
T Consensus 104 ~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~ 181 (274)
T 2qe6_A 104 DARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGA 181 (274)
T ss_dssp TCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHH
T ss_pred CCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHH
Confidence 89999999999999999988743 247999999997632 22 57999999999999976 8999999
Q ss_pred HHhccccCeeEEEEeecc
Q 022836 153 ISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 153 ~~~~LkpgG~l~~~~~~~ 170 (291)
+.++|+|||+|++.....
T Consensus 182 ~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 182 YRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHSCTTCEEEEEEEBC
T ss_pred HHHhCCCCcEEEEEEecC
Confidence 999999999999988754
No 77
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.72 E-value=5.8e-17 Score=133.78 Aligned_cols=107 Identities=22% Similarity=0.241 Sum_probs=92.2
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cC-CCccEEEEcc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--ME-ASYDRIYSIE 138 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~-~~~D~i~~~~ 138 (291)
.++.+|||||||+|.++..+++.+|+.+|+|+|+|+.+++.|++++...+++++.++.+|+.+++ .+ +.||.|+++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 35779999999999999999999889999999999999999999999888888999999998864 33 7899999876
Q ss_pred ccccccc--------HHHHHHHHHhccccCeeEEEEee
Q 022836 139 MFEHMKN--------YQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 139 ~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
+..+... ...+++.+.++|||||.+++.+.
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 5443321 36789999999999999998764
No 78
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.72 E-value=3e-17 Score=142.36 Aligned_cols=119 Identities=11% Similarity=0.229 Sum_probs=99.8
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC---CCeEEEEccccCCcc
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL---QNVEIIVADISTFEM 127 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~ 127 (291)
....+++.+...++ +|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ .++.++++|+.+++.
T Consensus 71 ~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 147 (299)
T 3g2m_A 71 EAREFATRTGPVSG-PVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL 147 (299)
T ss_dssp HHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC
T ss_pred HHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc
Confidence 34455555554444 9999999999999999987 78999999999999999999887663 479999999999877
Q ss_pred CCCccEEEEc-ccccccc--cHHHHHHHHHhccccCeeEEEEeeccCC
Q 022836 128 EASYDRIYSI-EMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 128 ~~~~D~i~~~-~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
+++||+|++. .++++++ +...+++++.++|||||+|++.+++...
T Consensus 148 ~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 195 (299)
T 3g2m_A 148 DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEA 195 (299)
T ss_dssp SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCcc
Confidence 7899999865 5677664 4688999999999999999999887653
No 79
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.72 E-value=1.6e-16 Score=133.23 Aligned_cols=134 Identities=19% Similarity=0.341 Sum_probs=105.1
Q ss_pred hcCCChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEE
Q 022836 14 HYELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGI 93 (291)
Q Consensus 14 ~yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~v 93 (291)
.||.-.+.|...... ..| ......+...+ .++.+|||+|||+|.++..+++. .+|+|+
T Consensus 3 ~y~~~a~~yd~~~~~-~~~----------------~~~~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~---~~v~~v 60 (243)
T 3d2l_A 3 AYEQFAYVYDELMQD-VPY----------------PEWVAWVLEQV--EPGKRIADIGCGTGTATLLLADH---YEVTGV 60 (243)
T ss_dssp ---CTTHHHHHHTTT-CCH----------------HHHHHHHHHHS--CTTCEEEEESCTTCHHHHHHTTT---SEEEEE
T ss_pred hHHHHHHHHHHhhhc-ccH----------------HHHHHHHHHHc--CCCCeEEEecCCCCHHHHHHhhC---CeEEEE
Confidence 467777777765432 111 22334444443 45689999999999999998865 699999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcc-ccccc---ccHHHHHHHHHhccccCeeEEEEeec
Q 022836 94 CNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIE-MFEHM---KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 94 D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~-~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
|+|+.+++.++++....+. ++.++.+|+.+.+.+++||+|++.. +++|+ .+...+++++.++|||||.+++..++
T Consensus 61 D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 61 DLSEEMLEIAQEKAMETNR-HVDFWVQDMRELELPEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp ESCHHHHHHHHHHHHHTTC-CCEEEECCGGGCCCSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCHHHHHHHHHhhhhcCC-ceEEEEcChhhcCCCCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 9999999999999887764 7999999999877668899999986 89988 56778999999999999999997765
Q ss_pred c
Q 022836 170 H 170 (291)
Q Consensus 170 ~ 170 (291)
.
T Consensus 140 ~ 140 (243)
T 3d2l_A 140 P 140 (243)
T ss_dssp H
T ss_pred H
Confidence 4
No 80
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.71 E-value=3.5e-17 Score=133.64 Aligned_cols=107 Identities=15% Similarity=0.241 Sum_probs=92.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~l 140 (291)
.++ +|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....+. ++.++.+|+.+.+.+ ++||+|++....
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~~ 104 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFDIVADAWEGIVSIFCH 104 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBSCCTTTCSEEEEECCC
T ss_pred CCC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcCCCcCCccEEEEEhhc
Confidence 456 9999999999999999976 77999999999999999999988877 899999999988755 789999996433
Q ss_pred cccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022836 141 EHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
.+..+...+++++.++|||||.+++.++....
T Consensus 105 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 105 LPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp CCHHHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 33357889999999999999999999886544
No 81
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.71 E-value=9.2e-17 Score=141.40 Aligned_cols=114 Identities=11% Similarity=0.081 Sum_probs=99.4
Q ss_pred HHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccE
Q 022836 55 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDR 133 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~D~ 133 (291)
+++.++..+..+|||+|||+|..+..+++.+|+.+++++|+ +.+++.+++++...++ ++++++.+|+.+ +.+.+||+
T Consensus 161 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~p~~~D~ 238 (332)
T 3i53_A 161 IAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-PLPAGAGG 238 (332)
T ss_dssp GGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCCCSCSE
T ss_pred HHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-CCCCCCcE
Confidence 34444556678999999999999999999999999999999 9999999999988887 579999999974 33348999
Q ss_pred EEEcccccccccH--HHHHHHHHhccccCeeEEEEeecc
Q 022836 134 IYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 134 i~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
|++..+++++++. .++++++++.|||||++++.++..
T Consensus 239 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 239 YVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred EEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 9999999999774 889999999999999999987644
No 82
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.71 E-value=1.7e-16 Score=140.82 Aligned_cols=117 Identities=10% Similarity=0.092 Sum_probs=103.2
Q ss_pred HHHHHcCCCC-CCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCc--cCC
Q 022836 54 LYCERSRLED-GHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFE--MEA 129 (291)
Q Consensus 54 ~~~~~~~~~~-~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~--~~~ 129 (291)
.+++.++..+ +.+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++++...++ ++++++.+|+.+.+ .++
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGG 247 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCC
Confidence 5566666666 88999999999999999999999999999999 8899999999988877 46999999999876 557
Q ss_pred CccEEEEcccccccccH--HHHHHHHHhccccCeeEEEEeeccC
Q 022836 130 SYDRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 130 ~~D~i~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
.||+|++..++|++++. ..+++++.+.|||||++++.++..+
T Consensus 248 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 248 AADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred CccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 79999999999999654 8899999999999999999877554
No 83
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.71 E-value=1.6e-16 Score=137.86 Aligned_cols=109 Identities=11% Similarity=0.065 Sum_probs=87.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC------CeEEEEccc------cCCc---c
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ------NVEIIVADI------STFE---M 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~------~v~~~~~d~------~~~~---~ 127 (291)
++.+|||||||+|..+..++... +.+|+|+|+|+.|++.|++++...+.. ++++.+.|+ .+++ .
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 57899999999998766665542 579999999999999999988776542 267888887 2221 2
Q ss_pred CCCccEEEEccccccc---ccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022836 128 EASYDRIYSIEMFEHM---KNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
.++||+|+|..+++++ .+...+++++.++|||||++++.+++...
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~ 174 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDK 174 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 2789999999999875 46689999999999999999999887543
No 84
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.71 E-value=1.8e-16 Score=135.97 Aligned_cols=118 Identities=17% Similarity=0.311 Sum_probs=99.2
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 128 (291)
...+..+++.+. .++.+|||+|||+|..+..+++..|+.+|+++|+|+.+++.+++++...+++++.++++|+.+....
T Consensus 96 e~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~ 174 (276)
T 2b3t_A 96 ECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAG 174 (276)
T ss_dssp HHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTT
T ss_pred HHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhccc
Confidence 345566666665 5678999999999999999998888899999999999999999999998887899999999885434
Q ss_pred CCccEEEEccccccc-------------------------ccHHHHHHHHHhccccCeeEEEEe
Q 022836 129 ASYDRIYSIEMFEHM-------------------------KNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~-------------------------~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
++||+|+++.++... .....+++.+.+.|||||++++..
T Consensus 175 ~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 175 QQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp CCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 789999998655332 245789999999999999999864
No 85
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.71 E-value=9.9e-17 Score=136.41 Aligned_cols=112 Identities=15% Similarity=0.259 Sum_probs=93.4
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 128 (291)
......+...+ +++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++. +++.++.+|+.+++.+
T Consensus 38 ~~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~ 108 (263)
T 3pfg_A 38 ADLAALVRRHS--PKAASLLDVACGTGMHLRHLADS--FGTVEGLELSADMLAIARRRN-----PDAVLHHGDMRDFSLG 108 (263)
T ss_dssp HHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHTTT--SSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTCCCS
T ss_pred HHHHHHHHhhC--CCCCcEEEeCCcCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhC-----CCCEEEECChHHCCcc
Confidence 33344443332 45689999999999999999987 679999999999999888764 2789999999998777
Q ss_pred CCccEEEEcc-cccccc---cHHHHHHHHHhccccCeeEEEEeec
Q 022836 129 ASYDRIYSIE-MFEHMK---NYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 129 ~~~D~i~~~~-~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
++||+|++.. +++|+. +...+++++.++|||||++++....
T Consensus 109 ~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 153 (263)
T 3pfg_A 109 RRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWW 153 (263)
T ss_dssp CCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred CCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 8999999998 999994 6678999999999999999997543
No 86
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.71 E-value=1.5e-17 Score=137.55 Aligned_cols=111 Identities=16% Similarity=0.172 Sum_probs=88.3
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH----HHhCCCCeEEEEccccCCccC-CCc
Q 022836 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQC----RVLELQNVEIIVADISTFEME-ASY 131 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~v~~~~~d~~~~~~~-~~~ 131 (291)
+.+...++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.+++.+.+++ ...+++++.++++|+.+++.. +.
T Consensus 21 ~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~- 99 (218)
T 3mq2_A 21 EQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV- 99 (218)
T ss_dssp HHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-
T ss_pred HHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-
Confidence 333466788999999999999999999988999999999999988644333 235566899999999998766 44
Q ss_pred cEEEEcc---cc--cccccHHHHHHHHHhccccCeeEEEEee
Q 022836 132 DRIYSIE---MF--EHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 132 D~i~~~~---~l--~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
|.|++.. .. +++++...+++++.++|||||.+++...
T Consensus 100 d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 100 GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 7666433 22 2556778999999999999999999554
No 87
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.70 E-value=7.8e-17 Score=135.39 Aligned_cols=101 Identities=23% Similarity=0.280 Sum_probs=90.9
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----CCCccEEEEc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----EASYDRIYSI 137 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----~~~~D~i~~~ 137 (291)
.++.+|||+|||+|..+..++...++.+|+|+|+|+.+++.++++++..++++++++++|+.+++. .++||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 467899999999999999999877789999999999999999999999988789999999988653 3789999997
Q ss_pred ccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 138 EMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 138 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
. +.+...+++.+.++|||||.+++.
T Consensus 149 ~----~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 149 A----VARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp C----CSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred c----cCCHHHHHHHHHHhcCCCCEEEEE
Confidence 6 367899999999999999999885
No 88
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.70 E-value=4e-17 Score=133.54 Aligned_cols=107 Identities=20% Similarity=0.278 Sum_probs=91.2
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC--CCeEEEEccccCCcc---CCC-ccEEEE
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL--QNVEIIVADISTFEM---EAS-YDRIYS 136 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~v~~~~~d~~~~~~---~~~-~D~i~~ 136 (291)
++.+|||+|||+|.++..++... ..+|+|+|+|+.+++.++++++..++ ++++++.+|+.+... .++ ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 57899999999999999877663 46999999999999999999999887 689999999987532 367 999999
Q ss_pred cccccccccHHHHHHHH--HhccccCeeEEEEeeccC
Q 022836 137 IEMFEHMKNYQNLLKKI--SKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 137 ~~~l~~~~~~~~~l~~~--~~~LkpgG~l~~~~~~~~ 171 (291)
+.+++ ..+...+++.+ .++|+|||.+++......
T Consensus 132 ~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 132 DPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 98864 56778888888 678999999999876554
No 89
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.70 E-value=7e-16 Score=128.48 Aligned_cols=108 Identities=18% Similarity=0.251 Sum_probs=91.1
Q ss_pred CCCCCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-c-CCCccEEEE
Q 022836 60 RLEDGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-M-EASYDRIYS 136 (291)
Q Consensus 60 ~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~-~~~~D~i~~ 136 (291)
...++.+|||+||| +|.++..+++.. +.+|+|+|+|+.+++.+++++...++ +++++++|+.... . +++||+|++
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~~~fD~I~~ 129 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGVVEGTFDVIFS 129 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTTCCSCEEEEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhcccCceeEEEE
Confidence 35678999999999 999999999886 78999999999999999999999988 8999999975432 2 278999999
Q ss_pred ccccccccc-------------------HHHHHHHHHhccccCeeEEEEeec
Q 022836 137 IEMFEHMKN-------------------YQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 137 ~~~l~~~~~-------------------~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
+.++.+..+ ...+++.+.++|||||++++..+.
T Consensus 130 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 181 (230)
T 3evz_A 130 APPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD 181 (230)
T ss_dssp CCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES
T ss_pred CCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc
Confidence 988765432 478999999999999999997654
No 90
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.70 E-value=1.6e-18 Score=145.65 Aligned_cols=103 Identities=15% Similarity=0.169 Sum_probs=92.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccEEEEccccc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSIEMFE 141 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~D~i~~~~~l~ 141 (291)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ +++.++++|+.+++..++||+|+++.+++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcC
Confidence 6889999999999999999987 68999999999999999999999988 58999999999987558999999999999
Q ss_pred ccccHHHHHHHHHhccccCeeEEEEe
Q 022836 142 HMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 142 ~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
+..+....+..+.++|+|||.+++..
T Consensus 156 ~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 156 GPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CcchhhhHHHHHHhhcCCcceeHHHH
Confidence 98777667888999999999976643
No 91
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.70 E-value=1.3e-16 Score=139.22 Aligned_cols=108 Identities=16% Similarity=0.131 Sum_probs=92.0
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh-------CCCCeEEEEccccCCc----c---
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-------ELQNVEIIVADISTFE----M--- 127 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~v~~~~~d~~~~~----~--- 127 (291)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.++++.... +..++.++++|+.+.+ .
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 36789999999999999999874 4789999999999999999988764 3347999999999875 3
Q ss_pred CCCccEEEEccccccc----ccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 128 EASYDRIYSIEMFEHM----KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
.++||+|+|..+++++ ++...+++++.++|||||.+++.+++.
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 2589999999999887 446789999999999999999998865
No 92
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.70 E-value=2.5e-17 Score=140.38 Aligned_cols=107 Identities=17% Similarity=0.141 Sum_probs=86.2
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCC--------------------------
Q 022836 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLEL-------------------------- 112 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~-------------------------- 112 (291)
+..++.+|||||||+|.++..++.. ++ +|+|+|+|+.|++.++++++....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 4567889999999999888877655 44 799999999999999987654310
Q ss_pred ---CCeE-EEEccccCCcc-----CCCccEEEEccccccc----ccHHHHHHHHHhccccCeeEEEEee
Q 022836 113 ---QNVE-IIVADISTFEM-----EASYDRIYSIEMFEHM----KNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 113 ---~~v~-~~~~d~~~~~~-----~~~~D~i~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
.++. ++.+|+.+..+ .++||+|+++.+++++ +++..+++++.++|||||.|++...
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 1243 88999988421 2689999999999986 5667899999999999999999865
No 93
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.70 E-value=5.1e-16 Score=138.11 Aligned_cols=119 Identities=16% Similarity=0.209 Sum_probs=104.3
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCC
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEA 129 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~ 129 (291)
....+++.++..++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++++...+++ +++++.+|+.+.+.+.
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 256 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE 256 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC
Confidence 345667777778889999999999999999999998899999999 99999999999888774 5999999999875543
Q ss_pred CccEEEEccccccccc--HHHHHHHHHhccccCeeEEEEeeccC
Q 022836 130 SYDRIYSIEMFEHMKN--YQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 130 ~~D~i~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
+|+|++..+++++++ ..++++++.++|||||++++.++..+
T Consensus 257 -~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 257 -ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp -CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred -CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 499999999999976 78899999999999999988876543
No 94
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.70 E-value=1.6e-16 Score=130.96 Aligned_cols=115 Identities=25% Similarity=0.280 Sum_probs=98.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM- 127 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~- 127 (291)
.....+++.+...++.+|||+|||+|.++..+++.. |..+|+++|+|+.+++.+++++...+++++.++.+|+.....
T Consensus 64 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 143 (215)
T 2yxe_A 64 HMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEP 143 (215)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGG
T ss_pred HHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCC
Confidence 344566667777889999999999999999999886 448999999999999999999988888789999999865433
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
.++||+|++..+++++. +.+.+.|||||++++.....
T Consensus 144 ~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 144 LAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp GCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred CCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 37899999999999886 37899999999999987654
No 95
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.70 E-value=1.3e-16 Score=130.75 Aligned_cols=101 Identities=17% Similarity=0.286 Sum_probs=90.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccccc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFEH 142 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~l~~ 142 (291)
++.+|||+|||+|.++..++...|+.+++++|+|+.+++.+++++...+++++.++.+|+.+....++||+|+++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~---- 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRA---- 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSC----
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEec----
Confidence 4789999999999999999998888999999999999999999999888877999999999876457899999864
Q ss_pred cccHHHHHHHHHhccccCeeEEEEe
Q 022836 143 MKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 143 ~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
+.+...+++.+.++|+|||.+++..
T Consensus 141 ~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 141 FASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp SSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 3567899999999999999998864
No 96
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.70 E-value=7.3e-17 Score=128.98 Aligned_cols=121 Identities=8% Similarity=0.160 Sum_probs=97.2
Q ss_pred HHHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCC-c-
Q 022836 51 MLELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTF-E- 126 (291)
Q Consensus 51 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~-~- 126 (291)
....+++.+. ..++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.++++++..++ +++.++.+|+.+. +
T Consensus 18 ~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 96 (177)
T 2esr_A 18 VRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDC 96 (177)
T ss_dssp CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHh
Confidence 3445555554 567889999999999999999976 457999999999999999999998887 3799999999884 2
Q ss_pred cCCCccEEEEcccccccccHHHHHHHHH--hccccCeeEEEEeeccCCc
Q 022836 127 MEASYDRIYSIEMFEHMKNYQNLLKKIS--KWMKEDTLLFVHHFCHKTF 173 (291)
Q Consensus 127 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~~~~ 173 (291)
..++||+|+++.+++ .......++.+. ++|+|||++++........
T Consensus 97 ~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~~ 144 (177)
T 2esr_A 97 LTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVCETDKTVLL 144 (177)
T ss_dssp BCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETTCCC
T ss_pred hcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEECCcccc
Confidence 226799999998763 245567777777 9999999999988765543
No 97
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.70 E-value=1.7e-16 Score=127.74 Aligned_cols=121 Identities=14% Similarity=0.140 Sum_probs=97.3
Q ss_pred HHHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc-
Q 022836 51 MLELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM- 127 (291)
Q Consensus 51 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~- 127 (291)
....+++.+. ..++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.+++++...++ ++++++.+|+.+...
T Consensus 31 ~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 109 (187)
T 2fhp_A 31 VKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQ 109 (187)
T ss_dssp HHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHH
Confidence 3444445443 357889999999999999998874 357999999999999999999998887 479999999987432
Q ss_pred ----CCCccEEEEcccccccccHHHHHHHH--HhccccCeeEEEEeeccCCc
Q 022836 128 ----EASYDRIYSIEMFEHMKNYQNLLKKI--SKWMKEDTLLFVHHFCHKTF 173 (291)
Q Consensus 128 ----~~~~D~i~~~~~l~~~~~~~~~l~~~--~~~LkpgG~l~~~~~~~~~~ 173 (291)
.++||+|+++.+++ .......++.+ .++|+|||++++..+.....
T Consensus 110 ~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~~ 160 (187)
T 2fhp_A 110 FYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTVKL 160 (187)
T ss_dssp HHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTCCC
T ss_pred HHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcccc
Confidence 47899999998854 44567777777 88999999999988766543
No 98
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.69 E-value=2.2e-16 Score=140.99 Aligned_cols=116 Identities=11% Similarity=0.156 Sum_probs=96.9
Q ss_pred HHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC---CeEEEEccccCCccCCC
Q 022836 54 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ---NVEIIVADISTFEMEAS 130 (291)
Q Consensus 54 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~---~v~~~~~d~~~~~~~~~ 130 (291)
.+++.+...++.+|||+|||+|.++..+++.+|+.+|+++|+|+.+++.+++++..++++ ++.++.+|+.+....++
T Consensus 213 ~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~ 292 (375)
T 4dcm_A 213 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 292 (375)
T ss_dssp HHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTC
T ss_pred HHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCC
Confidence 345666666778999999999999999999988899999999999999999999998863 58899999998544478
Q ss_pred ccEEEEcccccccc-----cHHHHHHHHHhccccCeeEEEEeec
Q 022836 131 YDRIYSIEMFEHMK-----NYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 131 ~D~i~~~~~l~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
||+|+++.++++.. ....+++.+.++|||||.+++....
T Consensus 293 fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 293 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp EEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred eeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 99999999997532 2347899999999999999996543
No 99
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.69 E-value=1.3e-16 Score=129.71 Aligned_cols=110 Identities=15% Similarity=0.222 Sum_probs=93.3
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCc--cCCCccEEE
Q 022836 60 RLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFE--MEASYDRIY 135 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~--~~~~~D~i~ 135 (291)
...++.+|||+|||+|.++..+++.. |..+|+|+|+|+.+++.+++++...++ +++.++++|+.+++ .+++||+|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 45678899999999999999999875 467999999999999999999999887 68999999998875 237899999
Q ss_pred Ecccccc---------cccHHHHHHHHHhccccCeeEEEEeec
Q 022836 136 SIEMFEH---------MKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 136 ~~~~l~~---------~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
++.++.. ..+...+++.+.++|||||++++..+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 9876511 124567999999999999999987654
No 100
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.69 E-value=1.5e-16 Score=140.98 Aligned_cols=123 Identities=15% Similarity=0.143 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH-------HHhCC--CCeEE
Q 022836 47 AEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQC-------RVLEL--QNVEI 117 (291)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~-------~~~~~--~~v~~ 117 (291)
.....+..+++.+.+.++.+|||||||+|.+++.++...+..+|+|||+|+.+++.|+++. +..|+ +++.+
T Consensus 157 t~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVef 236 (438)
T 3uwp_A 157 TSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTL 236 (438)
T ss_dssp THHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEE
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Confidence 3355677788888899999999999999999999998774456999999999999998754 34454 47999
Q ss_pred EEccccCCccC---CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 118 IVADISTFEME---ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 118 ~~~d~~~~~~~---~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+++|+.+.+.. ..||+|+++.++ +.++....|.++.+.|||||+|++.....
T Consensus 237 i~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 237 ERGDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp EECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred EECcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeeccc
Confidence 99999997653 479999998776 45788889999999999999998865443
No 101
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.69 E-value=2.5e-16 Score=133.04 Aligned_cols=102 Identities=15% Similarity=0.193 Sum_probs=91.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----CCCccEEEEc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----EASYDRIYSI 137 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----~~~~D~i~~~ 137 (291)
.++.+|||||||+|..+..++..+|+.+|+++|+|+.+++.++++++..++++++++++|++++.. .++||+|+|.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 568899999999999999999988899999999999999999999999999789999999998754 2789999997
Q ss_pred ccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 138 EMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 138 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
.+ .+...+++.+.++|||||++++..
T Consensus 159 a~----~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 159 AV----APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp SS----CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred Cc----CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 53 567889999999999999988754
No 102
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.69 E-value=2.1e-17 Score=138.54 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=91.3
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cC
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--ME 128 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~ 128 (291)
....+.+.+ ..+|.+|||||||+|..+..+++.. +.+|++||+|+.+++.|++++...+. ++.++.+|+.+.. .+
T Consensus 49 ~m~~~a~~~-~~~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~~~~~-~~~~~~~~a~~~~~~~~ 125 (236)
T 3orh_A 49 YMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWEDVAPTLP 125 (236)
T ss_dssp HHHHHHHHH-TTTCEEEEEECCTTSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHHHHGGGSC
T ss_pred HHHHHHHhh-ccCCCeEEEECCCccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHhhCCC-ceEEEeehHHhhccccc
Confidence 334444433 3578899999999999999998765 46899999999999999998877765 7889999987653 22
Q ss_pred -CCccEEEE-----cccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 129 -ASYDRIYS-----IEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 -~~~D~i~~-----~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
++||.|+. ...++|..+...+++++.++|||||+|++.
T Consensus 126 ~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 126 DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 78999975 445667788999999999999999999774
No 103
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.69 E-value=2.4e-16 Score=131.80 Aligned_cols=103 Identities=12% Similarity=0.277 Sum_probs=88.7
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEE-cccc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYS-IEMF 140 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~-~~~l 140 (291)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.++++. +++.++.+|+.+.+.+++||+|+| ..++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 111 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRLGRKFSAVVSMFSSV 111 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCCSSCEEEEEECTTGG
T ss_pred CCCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHcccCCCCcEEEEcCchH
Confidence 567899999999999999999884 49999999999999888753 368999999998776688999996 4489
Q ss_pred ccc---ccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 141 EHM---KNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 141 ~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
+|+ .+...+++++.++|||||.+++..+...
T Consensus 112 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 112 GYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp GGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 988 4567899999999999999999766543
No 104
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.69 E-value=2e-16 Score=134.41 Aligned_cols=111 Identities=15% Similarity=0.202 Sum_probs=93.1
Q ss_pred HHcCCC-CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCcc---CCCc
Q 022836 57 ERSRLE-DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM---EASY 131 (291)
Q Consensus 57 ~~~~~~-~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~---~~~~ 131 (291)
..+... ++.+|||+|||+|.++..++++.+ .+|+|+|+++.+++.+++++..++++ ++.++++|+.+... .++|
T Consensus 42 ~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~f 120 (259)
T 3lpm_A 42 KFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERA 120 (259)
T ss_dssp HHCCCCSSCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCE
T ss_pred HHhcCCCCCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCc
Confidence 345566 789999999999999999998853 49999999999999999999998884 69999999998763 3789
Q ss_pred cEEEEccccccc--------------------ccHHHHHHHHHhccccCeeEEEEee
Q 022836 132 DRIYSIEMFEHM--------------------KNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 132 D~i~~~~~l~~~--------------------~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
|+|+++.++... .+...+++.+.++|||||++++..+
T Consensus 121 D~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 177 (259)
T 3lpm_A 121 DIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR 177 (259)
T ss_dssp EEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc
Confidence 999998876543 2356799999999999999998653
No 105
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.69 E-value=2.4e-16 Score=140.86 Aligned_cols=122 Identities=20% Similarity=0.302 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHcC--CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccc
Q 022836 45 EDAEKAMLELYCERSR--LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI 122 (291)
Q Consensus 45 ~~~~~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~ 122 (291)
+.....+++.+.+.+. ..++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++..+++ +++++.+|+
T Consensus 213 d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~-~v~~~~~D~ 289 (381)
T 3dmg_A 213 DPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANAL-KAQALHSDV 289 (381)
T ss_dssp CHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTC-CCEEEECST
T ss_pred CHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCC-CeEEEEcch
Confidence 3444455555555442 346789999999999999999987 77999999999999999999998887 599999999
Q ss_pred cCCccC-CCccEEEEcccccc-----cccHHHHHHHHHhccccCeeEEEEeec
Q 022836 123 STFEME-ASYDRIYSIEMFEH-----MKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 123 ~~~~~~-~~~D~i~~~~~l~~-----~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
.+...+ ++||+|+++.++++ ..+...+++.+.++|||||.+++....
T Consensus 290 ~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 290 DEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp TTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred hhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 997665 79999999999988 466788999999999999999997643
No 106
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.69 E-value=9.9e-17 Score=127.14 Aligned_cols=106 Identities=12% Similarity=0.175 Sum_probs=89.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-----CCCccEEEEc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----EASYDRIYSI 137 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~~~~D~i~~~ 137 (291)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ +++++++|+.+... .++||+|+++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE--GWEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT--TCEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 6789999999999999999987 45699999999999999999998888 89999999987422 1379999999
Q ss_pred ccccccccHHHHHHHHH--hccccCeeEEEEeeccCCc
Q 022836 138 EMFEHMKNYQNLLKKIS--KWMKEDTLLFVHHFCHKTF 173 (291)
Q Consensus 138 ~~l~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~~~~ 173 (291)
.+++ .+...+++.+. ++|+|||.+++..+.....
T Consensus 118 ~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~~ 153 (171)
T 1ws6_A 118 PPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDLYL 153 (171)
T ss_dssp CCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTSCC
T ss_pred CCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCccCC
Confidence 8876 55566777777 9999999999988765443
No 107
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.69 E-value=4.1e-16 Score=128.14 Aligned_cols=107 Identities=13% Similarity=0.180 Sum_probs=91.7
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~l 140 (291)
.++.+|||+|||+|.++..+++..+ .+|+++|+|+.+++.++++... .+++.++.+|+.+++.+ ++||+|+++.++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDFPSASFDVVLEKGTL 117 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCSCSSCEEEEEEESHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCCCCCcccEEEECcch
Confidence 6788999999999999999998742 3899999999999999887653 34799999999987655 789999999988
Q ss_pred cccc---------------cHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 141 EHMK---------------NYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 141 ~~~~---------------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
+++. +...+++++.++|||||.+++.+++.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 118 DALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp HHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred hhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 6653 668899999999999999999887653
No 108
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.68 E-value=4.1e-16 Score=139.38 Aligned_cols=114 Identities=17% Similarity=0.107 Sum_probs=100.0
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCc
Q 022836 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASY 131 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~ 131 (291)
..+++.+...++.+|||+|||+|.++..+++.+|+.+++++|+ +.+++.+++++...++. +++++.+|+.+ +.+..|
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~ 249 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPVTA 249 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCCE
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCCCC
Confidence 3455666667889999999999999999999998899999999 99999999999888874 79999999986 334459
Q ss_pred cEEEEcccccccccH--HHHHHHHHhccccCeeEEEEee
Q 022836 132 DRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 132 D~i~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
|+|++..+++++++. ..+++++.++|||||++++.++
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999999999766 4899999999999999998776
No 109
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.68 E-value=3.5e-16 Score=139.37 Aligned_cols=109 Identities=13% Similarity=0.205 Sum_probs=96.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCC--ccCCCccEEEEcc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTF--EMEASYDRIYSIE 138 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~--~~~~~~D~i~~~~ 138 (291)
.+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++++...++ ++++++.+|+.+. +.+++||+|++..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~ 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQ 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEec
Confidence 4568999999999999999999999999999999 9999999999887776 5799999999986 3447899999999
Q ss_pred cccccccH--HHHHHHHHhccccCeeEEEEeeccC
Q 022836 139 MFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 139 ~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
+++++++. ..+++++.+.|||||++++.++..+
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 99988654 5789999999999999999876543
No 110
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.68 E-value=2.4e-17 Score=135.46 Aligned_cols=118 Identities=15% Similarity=0.135 Sum_probs=78.2
Q ss_pred HHHHHHHHHHcCC-CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc
Q 022836 49 KAMLELYCERSRL-EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM 127 (291)
Q Consensus 49 ~~~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 127 (291)
..++..+++.+.. .++.+|||+|||+|.++..+++..++.+++|+|+|+.+++.+++++...+. +++++++|+.+...
T Consensus 15 ~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~ 93 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLI 93 (215)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhh
Confidence 4455666666655 678999999999999999999998888999999999999999999988777 88999999987433
Q ss_pred C-----CCccEEEEcccccccccH--------------------------HHHHHHHHhccccCeeEEEEe
Q 022836 128 E-----ASYDRIYSIEMFEHMKNY--------------------------QNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 128 ~-----~~~D~i~~~~~l~~~~~~--------------------------~~~l~~~~~~LkpgG~l~~~~ 167 (291)
. ++||+|+++.++....+. ..+++.+.++|||||++++..
T Consensus 94 ~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 94 ERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp HHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred hhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 3 789999998776543221 678889999999999944433
No 111
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.68 E-value=3.2e-16 Score=148.72 Aligned_cols=120 Identities=23% Similarity=0.231 Sum_probs=99.9
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHh------CCCCeEEEEcccc
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVL------ELQNVEIIVADIS 123 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~v~~~~~d~~ 123 (291)
.+..+++.+...++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.|++++... ++++++++++|+.
T Consensus 709 Rle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~ 788 (950)
T 3htx_A 709 RVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSIL 788 (950)
T ss_dssp HHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTT
T ss_pred HHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchH
Confidence 34444444444578899999999999999999875 3479999999999999999876542 4567999999999
Q ss_pred CCccC-CCccEEEEcccccccccHH--HHHHHHHhccccCeeEEEEeeccC
Q 022836 124 TFEME-ASYDRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 124 ~~~~~-~~~D~i~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
+++.. ++||+|++..+++|+++.. .+++++.++|||| .+++.+++..
T Consensus 789 dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~e 838 (950)
T 3htx_A 789 EFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYE 838 (950)
T ss_dssp SCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGG
T ss_pred hCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCch
Confidence 98776 8999999999999997654 5899999999999 8888887653
No 112
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.68 E-value=2e-16 Score=129.49 Aligned_cols=108 Identities=15% Similarity=0.263 Sum_probs=90.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-ccC-CCccEEEEcccc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-EME-ASYDRIYSIEMF 140 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~~~-~~~D~i~~~~~l 140 (291)
++.+|||+|||+|.++..++++. ..+|+++|+|+.+++.+++++...++++++++++|+.+. +.. ++||+|+++.++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 57899999999999999887763 359999999999999999999998887899999999874 323 689999999885
Q ss_pred cccccHHHHHHHHHh--ccccCeeEEEEeeccCC
Q 022836 141 EHMKNYQNLLKKISK--WMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~--~LkpgG~l~~~~~~~~~ 172 (291)
+ ......+++.+.+ +|+|||++++.......
T Consensus 133 ~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 133 R-RGLLEETINLLEDNGWLADEALIYVESEVENG 165 (202)
T ss_dssp S-TTTHHHHHHHHHHTTCEEEEEEEEEEEEGGGC
T ss_pred C-CCcHHHHHHHHHhcCccCCCcEEEEEECCCcc
Confidence 4 5667788888866 59999999988765443
No 113
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.68 E-value=5.2e-16 Score=127.74 Aligned_cols=106 Identities=19% Similarity=0.127 Sum_probs=85.0
Q ss_pred cCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC----ccCCCccEE
Q 022836 59 SRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF----EMEASYDRI 134 (291)
Q Consensus 59 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~~~~~~D~i 134 (291)
+...++.+|||+|||+|..+..+++..+..+|+|+|+|+.+++.+.+.++.. .++.++.+|+... +..++||+|
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~fD~V 130 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIVEKVDLI 130 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTCCCEEEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccccceeEE
Confidence 4567889999999999999999998875579999999999988777766543 3788999998774 233789999
Q ss_pred EEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 135 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 135 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
+++.. .-.+...+++++.++|||||.+++...
T Consensus 131 ~~~~~--~~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 131 YQDIA--QKNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp EECCC--STTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEecc--ChhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 99732 113344568999999999999999754
No 114
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.68 E-value=2.8e-17 Score=149.06 Aligned_cols=123 Identities=11% Similarity=0.142 Sum_probs=100.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCC--eEEEE
Q 022836 42 KTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQN--VEIIV 119 (291)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~--v~~~~ 119 (291)
..+.+...+..+.+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ +.+. ..+..
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~ 159 (416)
T 4e2x_A 86 SVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEK 159 (416)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT----TCCEECSCCSH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc----CCCcceeeech
Confidence 3566667777888888888888999999999999999999986 77999999999999887764 3321 11223
Q ss_pred ccccCCccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 120 ADISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 120 ~d~~~~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
.+...++.+ ++||+|++..+++|++++..+++++.++|||||++++.++..
T Consensus 160 ~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 211 (416)
T 4e2x_A 160 ATADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYL 211 (416)
T ss_dssp HHHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hhHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 444444444 899999999999999999999999999999999999988764
No 115
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.68 E-value=3.3e-16 Score=137.94 Aligned_cols=116 Identities=16% Similarity=0.130 Sum_probs=100.5
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCC
Q 022836 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~ 130 (291)
...+++.++..+ .+|||+|||+|..+..+++.+|+.+++++|+ +.+++.+++++...++ ++++++.+|+.+ +.+++
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 233 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVPSN 233 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCCSS
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCCCC
Confidence 455666666666 8999999999999999999998899999999 9999999998877665 479999999988 44477
Q ss_pred ccEEEEcccccccccHH--HHHHHHHhccccCeeEEEEeecc
Q 022836 131 YDRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
||+|++..+++++++.. .+++++.+.|||||++++.++..
T Consensus 234 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 234 GDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp CSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred CCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 99999999999886554 89999999999999999987654
No 116
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.68 E-value=5.1e-16 Score=131.41 Aligned_cols=114 Identities=16% Similarity=0.230 Sum_probs=98.9
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHhCCCC-eEEEEccccCCccCC
Q 022836 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVLELQN-VEIIVADISTFEMEA 129 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~ 129 (291)
...++..+...++.+|||+|||+|.++..+++. .|+.+|+++|+|+.+++.|+++++..++++ ++++.+|+.+....+
T Consensus 82 ~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (255)
T 3mb5_A 82 AALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEE 161 (255)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCC
T ss_pred HHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCC
Confidence 446667778889999999999999999999998 678999999999999999999999988854 999999999764447
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 130 ~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+||+|+++ .++...+++++.++|+|||.+++..++.
T Consensus 162 ~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 162 NVDHVILD-----LPQPERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp SEEEEEEC-----SSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred CcCEEEEC-----CCCHHHHHHHHHHHcCCCCEEEEEECCH
Confidence 89999984 4566788999999999999999877643
No 117
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.68 E-value=4.4e-16 Score=129.17 Aligned_cols=121 Identities=12% Similarity=0.162 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC--CeEEEEcc
Q 022836 45 EDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVAD 121 (291)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d 121 (291)
.......+..++...+..++.+|||||||+|..+..+++..+ +.+|+++|+|+.+++.++++++..+++ +++++.+|
T Consensus 38 ~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd 117 (221)
T 3dr5_A 38 DEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR 117 (221)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC
T ss_pred CHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC
Confidence 344556677777666655566999999999999999998764 789999999999999999999998885 79999999
Q ss_pred ccCCc--c-CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 122 ISTFE--M-EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 122 ~~~~~--~-~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
+.+.. . .++||+|++.... .+...+++.+.+.|||||++++...
T Consensus 118 a~~~l~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 118 PLDVMSRLANDSYQLVFGQVSP---MDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp HHHHGGGSCTTCEEEEEECCCT---TTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred HHHHHHHhcCCCcCeEEEcCcH---HHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 87753 2 3789999987644 4667899999999999999998544
No 118
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.68 E-value=4.4e-16 Score=129.80 Aligned_cols=111 Identities=18% Similarity=0.219 Sum_probs=94.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-C
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-E 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~ 128 (291)
..+..+++.+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.++++....+ ++.++.+|+.+... .
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~~~ 132 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEI--VDKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYEEE 132 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHH--cCEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCcccccccC
Confidence 44566777777888999999999999999999988 5899999999999999999887665 79999999987332 3
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
++||+|++..+++++.+ .+.+.|||||++++..+..
T Consensus 133 ~~fD~v~~~~~~~~~~~------~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 133 KPYDRVVVWATAPTLLC------KPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CCEEEEEESSBBSSCCH------HHHHTEEEEEEEEEEECSS
T ss_pred CCccEEEECCcHHHHHH------HHHHHcCCCcEEEEEEcCC
Confidence 78999999999998863 5889999999999987654
No 119
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.67 E-value=2.7e-16 Score=134.81 Aligned_cols=113 Identities=21% Similarity=0.283 Sum_probs=94.3
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHh-CCCCeEEEEccccCCccCCC
Q 022836 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVL-ELQNVEIIVADISTFEMEAS 130 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~v~~~~~d~~~~~~~~~ 130 (291)
..++..+...++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.+++++... +.+++.++.+|+.+....++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 179 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQM 179 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCC
Confidence 45666677888999999999999999999987 67889999999999999999999887 77789999999988433378
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
||+|++ ++++...+++.+.+.|||||++++.++..
T Consensus 180 fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 180 YDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp EEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred ccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 999998 45667789999999999999999987643
No 120
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.67 E-value=9.5e-16 Score=122.62 Aligned_cols=112 Identities=16% Similarity=0.276 Sum_probs=96.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~- 128 (291)
.....+++.+...++.+|||+|||+|.++..+++ ++.+|+|+|+|+.+++.+++++...+++++.++.+|+.+ +.+
T Consensus 22 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~ 98 (183)
T 2yxd_A 22 EIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDK 98 (183)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGG
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccC
Confidence 3445566666777889999999999999999997 588999999999999999999998888789999999988 333
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
++||+|+++.+ .+...+++.+.+. |||.+++..+..
T Consensus 99 ~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~ 134 (183)
T 2yxd_A 99 LEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVL 134 (183)
T ss_dssp CCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCH
T ss_pred CCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEeccc
Confidence 78999999988 6778899999988 999999987643
No 121
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.67 E-value=2.8e-16 Score=132.12 Aligned_cols=106 Identities=16% Similarity=0.260 Sum_probs=92.1
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC------CCccEE
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME------ASYDRI 134 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~------~~~D~i 134 (291)
..++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.++++. ...++.++++|+.+.+.. ..||+|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~--~~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFF--PRVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHS--SCEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhC--CCEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccccccCccEE
Confidence 4678899999999999999999985 49999999999999998876 223799999999986533 248999
Q ss_pred EEcccccccc--cHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 135 YSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 135 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
++..++++++ +...+++++.++|||||++++.++...
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 129 YMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp EEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred EEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 9999999997 889999999999999999999887654
No 122
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.67 E-value=3.4e-16 Score=128.13 Aligned_cols=105 Identities=16% Similarity=0.178 Sum_probs=91.2
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMF 140 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~l 140 (291)
..++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.+++++...+++++.++.+|+.+.. +++||+|+++.++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~fD~i~~~~~~ 135 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV-DGKFDLIVANILA 135 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC-CSCEEEEEEESCH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC-CCCceEEEECCcH
Confidence 356889999999999999998864 45699999999999999999999888866999999998854 4789999999887
Q ss_pred cccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 141 EHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
++ ...+++++.++|+|||++++..+..
T Consensus 136 ~~---~~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 136 EI---LLDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp HH---HHHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred HH---HHHHHHHHHHhcCCCCEEEEEecCc
Confidence 65 4788999999999999999976543
No 123
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.67 E-value=3.4e-16 Score=130.85 Aligned_cols=104 Identities=15% Similarity=0.253 Sum_probs=91.2
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCcc---CCCccEEEEc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM---EASYDRIYSI 137 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~---~~~~D~i~~~ 137 (291)
.++.+|||||||+|..+..+++..|+.+|+++|+++.+++.++++++..+++ +++++.+|+.+... .++||+|++.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 4678999999999999999998767899999999999999999999998884 89999999988644 4789999987
Q ss_pred ccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 138 EMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 138 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
.. ..+...+++.+.+.|||||++++...
T Consensus 150 ~~---~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 150 AA---KAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp TT---SSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred Cc---HHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 54 35678899999999999999988544
No 124
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.67 E-value=5.6e-17 Score=139.98 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=82.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh-----------------CC------------
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-----------------EL------------ 112 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----------------~~------------ 112 (291)
.++.+|||||||+|..+..++.. ++.+|+|+|+|+.|++.++++++.. +.
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 36789999999999965544433 3679999999999999988865321 10
Q ss_pred -CCeEEEEccccC-Ccc-----C-CCccEEEEcccccc----cccHHHHHHHHHhccccCeeEEEEe
Q 022836 113 -QNVEIIVADIST-FEM-----E-ASYDRIYSIEMFEH----MKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 113 -~~v~~~~~d~~~-~~~-----~-~~~D~i~~~~~l~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
..+.++.+|+.+ .+. + ++||+|+++.++++ ++++..+++++.++|||||+|++..
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 015677889987 432 1 56999999999999 6688999999999999999999974
No 125
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.67 E-value=3.7e-16 Score=140.97 Aligned_cols=118 Identities=17% Similarity=0.224 Sum_probs=97.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHH-------HHHHHHhC--CCCeEEEEc
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFI-------EEQCRVLE--LQNVEIIVA 120 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a-------~~~~~~~~--~~~v~~~~~ 120 (291)
..+..+++.+...++.+|||||||+|.++..+++..+..+|+|+|+++.+++.| ++++...| .++++++++
T Consensus 229 ~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~g 308 (433)
T 1u2z_A 229 NFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK 308 (433)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEc
Confidence 445667777788899999999999999999999876556899999999999998 88888888 468999987
Q ss_pred cccCC--c---cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 121 DISTF--E---MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 121 d~~~~--~---~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
|.... + ..++||+|+++.++ +.++....++++.+.|||||.+++..+
T Consensus 309 D~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 309 KSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp SCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred CccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 64421 1 12689999998766 447788899999999999999988643
No 126
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.67 E-value=2e-16 Score=133.64 Aligned_cols=117 Identities=15% Similarity=0.145 Sum_probs=93.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH--CCCCEEEEEcCCHHHHHHHHHHHHHh---CCC-C---------
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK--YSNCKITGICNSKTQKEFIEEQCRVL---ELQ-N--------- 114 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~-~--------- 114 (291)
.++..+++.+...++.+|||+|||+|.++..+++. .++.+|+|+|+|+.+++.|++++... +++ +
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~ 117 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSE 117 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhh
Confidence 45556666555456789999999999999999987 56789999999999999999887655 332 1
Q ss_pred ----------------eE-------------EEEccccCCcc-----C-CCccEEEEcccccccc---------cHHHHH
Q 022836 115 ----------------VE-------------IIVADISTFEM-----E-ASYDRIYSIEMFEHMK---------NYQNLL 150 (291)
Q Consensus 115 ----------------v~-------------~~~~d~~~~~~-----~-~~~D~i~~~~~l~~~~---------~~~~~l 150 (291)
++ +.++|+.+... . .+||+|+|+.++.+.. ....++
T Consensus 118 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l 197 (250)
T 1o9g_A 118 RFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLL 197 (250)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHH
T ss_pred hcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHH
Confidence 66 99999988542 3 5899999998776543 356899
Q ss_pred HHHHhccccCeeEEEE
Q 022836 151 KKISKWMKEDTLLFVH 166 (291)
Q Consensus 151 ~~~~~~LkpgG~l~~~ 166 (291)
+++.++|+|||++++.
T Consensus 198 ~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 198 RSLASALPAHAVIAVT 213 (250)
T ss_dssp HHHHHHSCTTCEEEEE
T ss_pred HHHHHhcCCCcEEEEe
Confidence 9999999999999983
No 127
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.67 E-value=9.8e-16 Score=136.04 Aligned_cols=120 Identities=14% Similarity=0.099 Sum_probs=102.8
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 128 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~- 128 (291)
+...++......++.+|||+|||+|.+++.++... |..+++|+|+|+.+++.|+++++..+++++++.++|+.+++.+
T Consensus 191 la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~ 270 (354)
T 3tma_A 191 LAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFF 270 (354)
T ss_dssp HHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTC
T ss_pred HHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcccc
Confidence 44556666778889999999999999999999886 6789999999999999999999999987899999999998765
Q ss_pred CCccEEEEccccccc--------ccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 129 ASYDRIYSIEMFEHM--------KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~--------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
..||+|+++.++... ..+..+++.+.+.|||||.+++.++..
T Consensus 271 ~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 271 PEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp CCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred CCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 678999999876542 124779999999999999999987643
No 128
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.66 E-value=3.7e-16 Score=132.89 Aligned_cols=113 Identities=13% Similarity=0.229 Sum_probs=94.6
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH---hCCC-CeEEEEccccCCc------
Q 022836 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV---LELQ-NVEIIVADISTFE------ 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~---~~~~-~v~~~~~d~~~~~------ 126 (291)
..+...++.+|||+|||+|.++..++++.|+.+|+|+|+++.+++.+++++.. ++++ ++.++++|+.+..
T Consensus 30 ~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~ 109 (260)
T 2ozv_A 30 SLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEA 109 (260)
T ss_dssp HTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHT
T ss_pred HHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhh
Confidence 44556678899999999999999999998888999999999999999999987 7774 6999999999872
Q ss_pred -c-CCCccEEEEccccccc------------------ccHHHHHHHHHhccccCeeEEEEeec
Q 022836 127 -M-EASYDRIYSIEMFEHM------------------KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 127 -~-~~~~D~i~~~~~l~~~------------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
. .++||+|+++.++... .....+++.+.++|||||++++..+.
T Consensus 110 ~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 110 GLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp TCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred ccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH
Confidence 2 3789999999766432 24678999999999999999886553
No 129
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.66 E-value=6.5e-16 Score=136.82 Aligned_cols=116 Identities=22% Similarity=0.221 Sum_probs=97.9
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCC
Q 022836 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~ 130 (291)
...+++.+...++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.++++++.+++ ++++++.+|+.+++.+++
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 116 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 116 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHHhccccCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCc
Confidence 345556666678899999999999999999876 356999999996 88999999998888 589999999999876688
Q ss_pred ccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEeec
Q 022836 131 YDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 131 ~D~i~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
||+|++..+++++ ++....+..+.++|||||.+++...+
T Consensus 117 ~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (348)
T 2y1w_A 117 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGD 157 (348)
T ss_dssp EEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEEE
T ss_pred eeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecCc
Confidence 9999999888776 45677888999999999999876544
No 130
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.66 E-value=4.2e-16 Score=130.52 Aligned_cols=108 Identities=15% Similarity=0.306 Sum_probs=86.8
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH------hCCCCeEEEEccccC-Cc--cC-CC
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV------LELQNVEIIVADIST-FE--ME-AS 130 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~------~~~~~v~~~~~d~~~-~~--~~-~~ 130 (291)
..++.+|||||||+|.++..+++.+|+..|+|+|+|+.+++.|+++++. .+.+++.++++|+.+ ++ .+ ++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 3456799999999999999999998889999999999999999988764 355789999999987 44 33 78
Q ss_pred ccEEEEccccccccc--------HHHHHHHHHhccccCeeEEEEee
Q 022836 131 YDRIYSIEMFEHMKN--------YQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
||.|+++.+-.+... ...+++.+.++|||||.|++.+.
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 999998755433321 14799999999999999998764
No 131
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.66 E-value=2.8e-16 Score=130.27 Aligned_cols=108 Identities=14% Similarity=0.154 Sum_probs=91.2
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCcc--C-----CCcc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM--E-----ASYD 132 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~--~-----~~~D 132 (291)
.++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.++++++..++. +++++.+|+.+... . ++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 3578999999999999999998653 789999999999999999999999884 69999999866321 1 5899
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 133 ~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+|++....++..+...++..+ ++|||||++++.....
T Consensus 137 ~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 137 MVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp EEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred EEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 999998887776666778877 9999999999866543
No 132
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.66 E-value=4.8e-16 Score=130.12 Aligned_cols=115 Identities=22% Similarity=0.251 Sum_probs=96.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC-CccC
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FEME 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~~ 128 (291)
.....+++.+...++.+|||+|||+|.++..+++..+ .+|+++|+++.+++.++++....+++++.++.+|+.. ++..
T Consensus 78 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (235)
T 1jg1_A 78 HMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPK 156 (235)
T ss_dssp HHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCC
Confidence 3445566666778899999999999999999998864 8999999999999999999998888789999999733 2222
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
.+||+|++..+++++.+ .+.+.|||||++++..+...
T Consensus 157 ~~fD~Ii~~~~~~~~~~------~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 157 APYDVIIVTAGAPKIPE------PLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp CCEEEEEECSBBSSCCH------HHHHTEEEEEEEEEEECSSS
T ss_pred CCccEEEECCcHHHHHH------HHHHhcCCCcEEEEEEecCC
Confidence 56999999999988753 67899999999999877543
No 133
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.66 E-value=2.1e-16 Score=134.20 Aligned_cols=113 Identities=12% Similarity=0.129 Sum_probs=92.0
Q ss_pred HHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC---------------------
Q 022836 54 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL--------------------- 112 (291)
Q Consensus 54 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------------- 112 (291)
.++.. ...++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.++++....+.
T Consensus 48 ~~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (265)
T 2i62_A 48 KIFCL-GAVKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKG 125 (265)
T ss_dssp HHHHS-SSCCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCH
T ss_pred HHhcc-cccCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccch
Confidence 44433 446778999999999999999887732 4999999999999999887754320
Q ss_pred --------CCe-EEEEccccCCcc--C---CCccEEEEccccc----ccccHHHHHHHHHhccccCeeEEEEee
Q 022836 113 --------QNV-EIIVADISTFEM--E---ASYDRIYSIEMFE----HMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 113 --------~~v-~~~~~d~~~~~~--~---~~~D~i~~~~~l~----~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
.++ .++.+|+.+..+ + ++||+|++..+++ ++++...+++++.++|||||++++..+
T Consensus 126 ~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 126 PEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 027 899999988643 3 6899999999999 666889999999999999999999874
No 134
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.66 E-value=1.2e-15 Score=135.61 Aligned_cols=115 Identities=15% Similarity=0.153 Sum_probs=100.5
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCc
Q 022836 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASY 131 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~ 131 (291)
..+++.+...++.+|||+|||+|.++..+++.+|+.+++++|+ +.+++.+++++...+++ +++++.+|+.+ +.+..|
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~ 250 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPRKA 250 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSSCE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCCCc
Confidence 3456666777889999999999999999999998899999999 99999999999888874 79999999986 233459
Q ss_pred cEEEEcccccccccH--HHHHHHHHhccccCeeEEEEeec
Q 022836 132 DRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 132 D~i~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
|+|++..+++++++. ..+++++.++|||||++++.++.
T Consensus 251 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 251 DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 999999999999765 58999999999999999998765
No 135
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.66 E-value=4.9e-16 Score=129.83 Aligned_cols=105 Identities=16% Similarity=0.317 Sum_probs=92.1
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCC-c-c--CCCccEEE
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTF-E-M--EASYDRIY 135 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~-~-~--~~~~D~i~ 135 (291)
..++.+|||+|||+|..+..+++..|+.+|+++|+++.+++.+++++...++ +++.++.+|+.+. + . .++||+|+
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 3467899999999999999999998888999999999999999999998887 4699999999874 2 1 36899999
Q ss_pred EcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 136 SIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 136 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
+..+. .+...+++.+.+.|+|||++++.+.
T Consensus 132 ~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 132 IDAAK---GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EEGGG---SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred ECCCH---HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 98776 3778999999999999999999754
No 136
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.66 E-value=7e-16 Score=131.04 Aligned_cols=100 Identities=19% Similarity=0.297 Sum_probs=87.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEccccc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFE 141 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~l~ 141 (291)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.. .+ ++.+|+.+++.+ ++||+|++..++.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~~~~~~fD~v~~~~~~~ 125 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLPFPSGAFEAVLALGDVL 125 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCCSCTTCEEEEEECSSHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCCCCCCCEEEEEEcchhh
Confidence 7789999999999999999976 7799999999999999887643 12 889999988765 7899999988766
Q ss_pred cc-ccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 142 HM-KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 142 ~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
|+ ++...+++++.++|||||.+++..++.
T Consensus 126 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 126 SYVENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp HHCSCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred hccccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 65 789999999999999999999988764
No 137
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.66 E-value=5.7e-16 Score=129.28 Aligned_cols=104 Identities=14% Similarity=0.184 Sum_probs=87.5
Q ss_pred HHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC----CccCCCc
Q 022836 56 CERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST----FEMEASY 131 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~----~~~~~~~ 131 (291)
++.+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.++++++.. +++.++.+|+.+ .+...+|
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~ 144 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYANIVEKV 144 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGTTTSCCE
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccccccCccE
Confidence 4555667889999999999999999999875689999999999999999887554 589999999987 5444789
Q ss_pred cEEEEcccccccccH---HHHHHHHHhccccCeeEEEE
Q 022836 132 DRIYSIEMFEHMKNY---QNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 132 D~i~~~~~l~~~~~~---~~~l~~~~~~LkpgG~l~~~ 166 (291)
|+|+. ++.+. ..+++++.+.|||||.+++.
T Consensus 145 D~v~~-----~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 145 DVIYE-----DVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEE-----CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEE-----ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 99993 33343 77899999999999999987
No 138
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.66 E-value=7.4e-16 Score=137.80 Aligned_cols=114 Identities=21% Similarity=0.331 Sum_probs=95.8
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCc
Q 022836 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASY 131 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~ 131 (291)
..+.......++.+|||+|||+|.++..+++.. ..+|+|+|+| .+++.++++++.++++ +++++.+|+.+++.+++|
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 130 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKV 130 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCE
T ss_pred HHHHhccccCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcc
Confidence 344444566788999999999999999999872 3499999999 9999999999998884 599999999998777899
Q ss_pred cEEEEccccccc---ccHHHHHHHHHhccccCeeEEEEee
Q 022836 132 DRIYSIEMFEHM---KNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 132 D~i~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
|+|++..+.+.+ .....+++.+.++|||||++++...
T Consensus 131 D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 131 DVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp EEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred eEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 999997655544 5688899999999999999977544
No 139
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.65 E-value=1.4e-15 Score=128.73 Aligned_cols=113 Identities=21% Similarity=0.267 Sum_probs=98.0
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHh-CCCCeEEEEccccCCccC-C
Q 022836 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVL-ELQNVEIIVADISTFEME-A 129 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~v~~~~~d~~~~~~~-~ 129 (291)
..++..+...++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.++++++.. +.+++.+..+|+.+.+.+ +
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 165 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEA 165 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTT
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC
Confidence 45667778889999999999999999999988 56789999999999999999999887 766899999999987544 7
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 130 ~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+||+|+++ .++...+++++.++|+|||.+++..+..
T Consensus 166 ~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 166 AYDGVALD-----LMEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp CEEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred CcCEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 89999984 4566789999999999999999987643
No 140
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.65 E-value=5.2e-16 Score=137.23 Aligned_cols=115 Identities=20% Similarity=0.220 Sum_probs=97.9
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCcc
Q 022836 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYD 132 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D 132 (291)
..+++.+...++.+|||+|||+|.++..+++..|..+|+++|+|+.+++.+++++...++ ++.++.+|+.+.. +++||
T Consensus 186 ~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~-~~~~~~~d~~~~~-~~~fD 263 (343)
T 2pjd_A 186 QLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV-EGEVFASNVFSEV-KGRFD 263 (343)
T ss_dssp HHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC-CCEEEECSTTTTC-CSCEE
T ss_pred HHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-CCEEEEccccccc-cCCee
Confidence 344555555567799999999999999999998778999999999999999999988877 5788899988754 47899
Q ss_pred EEEEcccccc-----cccHHHHHHHHHhccccCeeEEEEeec
Q 022836 133 RIYSIEMFEH-----MKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 133 ~i~~~~~l~~-----~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
+|+++.++++ ..+...+++++.++|||||.+++....
T Consensus 264 ~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 264 MIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp EEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred EEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 9999999985 345688999999999999999997654
No 141
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.65 E-value=1.3e-15 Score=122.67 Aligned_cols=114 Identities=18% Similarity=0.181 Sum_probs=97.0
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME- 128 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~- 128 (291)
....+++.+...++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.+++++...++ +++.+..+|+.+....
T Consensus 21 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 98 (192)
T 1l3i_A 21 VRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI 98 (192)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC
Confidence 34455566677889999999999999999999874 8999999999999999999988887 6899999998873222
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
.+||+|++..+++ +...+++.+.++|+|||.+++..+.
T Consensus 99 ~~~D~v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 99 PDIDIAVVGGSGG---ELQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp CCEEEEEESCCTT---CHHHHHHHHHHTEEEEEEEEEEECB
T ss_pred CCCCEEEECCchH---HHHHHHHHHHHhcCCCcEEEEEecC
Confidence 6899999998775 4588999999999999999997764
No 142
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.65 E-value=1.3e-15 Score=134.38 Aligned_cols=110 Identities=21% Similarity=0.325 Sum_probs=93.6
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-CC
Q 022836 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME-AS 130 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-~~ 130 (291)
..+.+.+...++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.++++++.+++ +++.++.+|+.+++.+ ++
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 131 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEK 131 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSC
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCc
Confidence 34444455677889999999999999999976 245999999996 99999999998888 6899999999998766 78
Q ss_pred ccEEEEcc---cccccccHHHHHHHHHhccccCeeEE
Q 022836 131 YDRIYSIE---MFEHMKNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 131 ~D~i~~~~---~l~~~~~~~~~l~~~~~~LkpgG~l~ 164 (291)
||+|++.. .+.+..+...++..+.++|||||.++
T Consensus 132 ~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 132 VDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 99999977 35555678889999999999999987
No 143
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.65 E-value=1.9e-16 Score=131.77 Aligned_cols=106 Identities=17% Similarity=0.167 Sum_probs=82.2
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCC-HHHHHHH---HHHHHHhCCCCeEEEEccccCCccC--CCccEEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNS-KTQKEFI---EEQCRVLELQNVEIIVADISTFEME--ASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s-~~~~~~a---~~~~~~~~~~~v~~~~~d~~~~~~~--~~~D~i~ 135 (291)
.++.+|||||||+|.++..+++..++.+|+|+|+| +.+++.| ++++...+++++.++++|+.+++.. ..+|.|+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 56789999999999999999987788999999999 6666665 7777777777899999999998532 3444454
Q ss_pred Eccccccc-----ccHHHHHHHHHhccccCeeEEEEe
Q 022836 136 SIEMFEHM-----KNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 136 ~~~~l~~~-----~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
++.+.... .+...+++++.++|||||.+++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 44332211 233568999999999999999844
No 144
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.64 E-value=1.8e-15 Score=122.17 Aligned_cols=102 Identities=18% Similarity=0.343 Sum_probs=88.6
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEc-c
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSI-E 138 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~-~ 138 (291)
..++.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++. +++.++.+|+.+.+.+ ++||+|+++ .
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~~D~i~~~~~ 116 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQISETDFDLIVSAGN 116 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCCCCCCEEEEEECCC
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCCCCCceeEEEECCc
Confidence 457889999999999999999987 779999999999999888754 3689999999987655 789999998 6
Q ss_pred ccccc--ccHHHHHHHHHhccccCeeEEEEeec
Q 022836 139 MFEHM--KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 139 ~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
+++++ ++...+++.+.++|+|||.+++..+.
T Consensus 117 ~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~ 149 (195)
T 3cgg_A 117 VMGFLAEDGREPALANIHRALGADGRAVIGFGA 149 (195)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred HHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 78887 45688999999999999999997654
No 145
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.64 E-value=1.4e-16 Score=134.87 Aligned_cols=151 Identities=11% Similarity=0.039 Sum_probs=101.3
Q ss_pred cCCChHHHHHhhCCCCCccccccCCCCCCHHHHHHHHHHHHHHHcCC--CCCCEEEEEcCCcchHHHHHHHHCCCCEEEE
Q 022836 15 YELPTSFFKLVLGKYFKYSCCYFSDASKTLEDAEKAMLELYCERSRL--EDGHTVLDVGCGWGSLSLYIAQKYSNCKITG 92 (291)
Q Consensus 15 yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~ 92 (291)
+.+.......+.+.......+.|.... .........+..++..+.. .++.+|||+|||+|.++..++++.++.+|+|
T Consensus 16 ~~l~~~~~~~~~~~~~~~~~~~~~p~~-~~r~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~g 94 (254)
T 2h00_A 16 RALTCTLLREDFGLSIDIPLERLIPTV-PLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLA 94 (254)
T ss_dssp HHHHHHHHHHHHCCCCCCCTTSCCCCH-HHHHHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHcCCeeeecCccccCCCc-cchHHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEE
Confidence 334455666677766655444443110 0112223445555544332 2577999999999999999998776789999
Q ss_pred EcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCC---ccC----CCccEEEEcccccccc-c--------------HHHH
Q 022836 93 ICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTF---EME----ASYDRIYSIEMFEHMK-N--------------YQNL 149 (291)
Q Consensus 93 vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~---~~~----~~~D~i~~~~~l~~~~-~--------------~~~~ 149 (291)
+|+|+.+++.|++++...+++ +++++++|+.+. +.+ ++||+|+++.++++.. + ...+
T Consensus 95 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l 174 (254)
T 2h00_A 95 TEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVN 174 (254)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-----------------------
T ss_pred EECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHH
Confidence 999999999999999988885 599999997652 222 4799999998776543 1 1245
Q ss_pred HHHHHhccccCeeEEEE
Q 022836 150 LKKISKWMKEDTLLFVH 166 (291)
Q Consensus 150 l~~~~~~LkpgG~l~~~ 166 (291)
+..+.++|||||.+.+.
T Consensus 175 ~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 175 TGGITEIMAEGGELEFV 191 (254)
T ss_dssp --CTTTTHHHHTHHHHH
T ss_pred hhhHHHHEecCCEEEEE
Confidence 67788999999987653
No 146
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.64 E-value=1.7e-15 Score=128.10 Aligned_cols=153 Identities=10% Similarity=0.083 Sum_probs=111.5
Q ss_pred ChHHHHHhhCCCCCccc---------cccCCCCCCHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCc--chHHHHHH-HH
Q 022836 18 PTSFFKLVLGKYFKYSC---------CYFSDASKTLEDAEKAMLELYCERSRL-EDGHTVLDVGCGW--GSLSLYIA-QK 84 (291)
Q Consensus 18 ~~~~~~~~~~~~~~y~~---------~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~vLDiGcG~--G~~~~~la-~~ 84 (291)
+...|..|++..-+|.. ..++. -..+....+..+...++.+.. ....+|||||||+ +..+..++ +.
T Consensus 24 ~aR~yd~~LgGk~n~~~Dr~~~~~~~~~~P~-~~~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~ 102 (277)
T 3giw_A 24 SARIYDYIIGGKDYYPADKEAGDAMSREWPA-LPVHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSV 102 (277)
T ss_dssp HHHHHHHHTTCSCCCHHHHHHHHHHHHHCTT-HHHHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHH
T ss_pred cchhheeecCCccCCHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHH
Confidence 37889999998877733 11221 112233445556666665542 3457999999997 43445444 45
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-------CCCcc-----EEEEccccccccc---HHHH
Q 022836 85 YSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-------EASYD-----RIYSIEMFEHMKN---YQNL 149 (291)
Q Consensus 85 ~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-------~~~~D-----~i~~~~~l~~~~~---~~~~ 149 (291)
.|+++|+++|.|+.|++.+++++...+..++.++++|+.+... .+.|| .|+++.+|||+++ +..+
T Consensus 103 ~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~ 182 (277)
T 3giw_A 103 APESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGI 182 (277)
T ss_dssp CTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHH
T ss_pred CCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHH
Confidence 7899999999999999999988765433479999999988521 13455 6889999999976 5789
Q ss_pred HHHHHhccccCeeEEEEeeccC
Q 022836 150 LKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 150 l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
++++.+.|+|||+|+++..+..
T Consensus 183 l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 183 VRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp HHHHHTTSCTTCEEEEEEECCT
T ss_pred HHHHHHhCCCCcEEEEEeccCC
Confidence 9999999999999999887654
No 147
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.64 E-value=1.3e-15 Score=126.35 Aligned_cols=108 Identities=19% Similarity=0.361 Sum_probs=91.4
Q ss_pred HHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC--ccC-CC
Q 022836 54 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF--EME-AS 130 (291)
Q Consensus 54 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~-~~ 130 (291)
.+++.+. .++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++. ..++.+|+.+. +.+ ++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~~~~~~~~ 93 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKEN--GTRVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMDMPYEEEQ 93 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTT--TCEEEEEESSHHHHHHHHTTS-------SEEEESCTTTCCCCSCTTC
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcCCCCCCCc
Confidence 4444444 67889999999999999999987 589999999999988776532 36889998873 333 78
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
||+|++..+++|+++...+++++.++|+|||.+++..++..
T Consensus 94 fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 94 FDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp EEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred cCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 99999999999999999999999999999999999887653
No 148
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.64 E-value=1e-15 Score=127.01 Aligned_cols=108 Identities=12% Similarity=0.132 Sum_probs=89.6
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc---cC-CCc
Q 022836 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE---ME-ASY 131 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~~-~~~ 131 (291)
+.+.++||.+|||+|||+|.++..++.. .|..+|+|+|+++.|++.+++++++. +|+..+.+|..... .. ..+
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~p~~~~~~~~~v 148 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARFPEKYRHLVEGV 148 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTCGGGGTTTCCCE
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccCccccccccceE
Confidence 4467899999999999999999999987 47789999999999999998877554 47899999887643 22 789
Q ss_pred cEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 132 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 132 D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
|+|++. +.+..+...++.++.+.|||||.+++...
T Consensus 149 DvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik 183 (233)
T 4df3_A 149 DGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIK 183 (233)
T ss_dssp EEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEe
Confidence 999875 34446678899999999999999998653
No 149
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.64 E-value=1.2e-15 Score=129.37 Aligned_cols=103 Identities=15% Similarity=0.126 Sum_probs=88.3
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMF 140 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~l 140 (291)
..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++..++++ +++..+|+.+....++||+|+++...
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~--g~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~~~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL--GGKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAALPFGPFDLLVANLYA 194 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHGGGCCEEEEEEECCH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh--CCeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcCcCCCCCEEEECCcH
Confidence 467889999999999999999876 459999999999999999999988875 99999998874224789999998665
Q ss_pred cccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 141 EHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
+ ....+++.+.++|||||+++++.+.
T Consensus 195 ~---~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 195 E---LHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp H---HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred H---HHHHHHHHHHHHcCCCCEEEEEeec
Confidence 4 3578899999999999999997653
No 150
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.63 E-value=1.2e-15 Score=126.60 Aligned_cols=115 Identities=14% Similarity=0.192 Sum_probs=94.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCc
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFE 126 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~ 126 (291)
.+.+..++.. .++.+|||||||+|..+..+++..| +.+|+++|+++.+++.+++++...+++ +++++.+|+.+..
T Consensus 47 ~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 123 (223)
T 3duw_A 47 GKFLQLLVQI---QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSL 123 (223)
T ss_dssp HHHHHHHHHH---HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred HHHHHHHHHh---hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 3444444432 4578999999999999999999876 789999999999999999999988885 5999999997642
Q ss_pred cC------CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 127 ME------ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 127 ~~------~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
.. ++||+|++.... .....+++.+.+.|+|||++++..+.
T Consensus 124 ~~~~~~~~~~fD~v~~d~~~---~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 124 QQIENEKYEPFDFIFIDADK---QNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp HHHHHTTCCCCSEEEECSCG---GGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred HHHHhcCCCCcCEEEEcCCc---HHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 21 579999988663 46678999999999999998886553
No 151
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.63 E-value=1.5e-15 Score=128.21 Aligned_cols=106 Identities=11% Similarity=0.185 Sum_probs=91.2
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCcc----CCCccEEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM----EASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~----~~~~D~i~ 135 (291)
.++.+|||||||+|..+..+++..| +.+|+++|+|+.+++.+++++...+++ +++++.+|+.+... .++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 4578999999999999999998876 789999999999999999999998884 79999999977322 14899999
Q ss_pred EcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 136 SIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 136 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+... ..+...+++.+.++|||||++++.....
T Consensus 142 ~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 142 IDAD---KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp ECSC---GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred ECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 9764 3567789999999999999999876543
No 152
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.63 E-value=2.1e-15 Score=129.07 Aligned_cols=107 Identities=20% Similarity=0.260 Sum_probs=94.1
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccc
Q 022836 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEM 139 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~ 139 (291)
...++.+|||+|||+|.++..+++..+..+|+++|+|+.+++.++++++.++++++.++.+|+.+.+..++||+|+++.+
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p 195 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYV 195 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCC
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCc
Confidence 35678899999999999999999987677999999999999999999999998889999999998832368999999877
Q ss_pred ccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 140 FEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
. +...++..+.+.|+|||+++++....
T Consensus 196 ~----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 196 H----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp S----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred c----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 5 55678899999999999999877654
No 153
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.63 E-value=1.5e-15 Score=134.58 Aligned_cols=105 Identities=28% Similarity=0.374 Sum_probs=90.7
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC-CCccEEEEcc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIE 138 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-~~~D~i~~~~ 138 (291)
..++.+|||+|||+|.++..+++. +..+|+|+|+| .+++.|+++++.++++ +++++.+|+.+++.+ ++||+|++..
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~ 141 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEW 141 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECC
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcc
Confidence 357889999999999999999987 35699999999 5999999999998884 599999999998776 8999999977
Q ss_pred cccc---cccHHHHHHHHHhccccCeeEEEEe
Q 022836 139 MFEH---MKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 139 ~l~~---~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
+.+. ......++..+.++|||||+++...
T Consensus 142 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 142 MGYCLFYESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp CBBTBTBTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred ccccccCchhHHHHHHHHHHhCCCCCEEcccc
Confidence 5443 3788999999999999999987533
No 154
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.63 E-value=1e-15 Score=135.66 Aligned_cols=115 Identities=12% Similarity=0.107 Sum_probs=93.4
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCC
Q 022836 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~ 130 (291)
...+++.++..++.+|||||||+|..+..+++.+|+.+++++|+ +.++. +++.+..+. ++++++.+|+.+ +.+ +
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~-~~p-~ 247 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR-EVP-H 247 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT-CCC-C
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCC-CCC-C
Confidence 44567777788899999999999999999999999999999999 44443 222222333 479999999974 333 8
Q ss_pred ccEEEEcccccccccH--HHHHHHHHhccccCeeEEEEeeccC
Q 022836 131 YDRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
||+|++..++|++++. .+++++++++|||||++++.+...+
T Consensus 248 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~ 290 (348)
T 3lst_A 248 ADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVP 290 (348)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBC
T ss_pred CcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 9999999999999876 6899999999999999999876543
No 155
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.63 E-value=1e-15 Score=131.37 Aligned_cols=105 Identities=21% Similarity=0.217 Sum_probs=91.3
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCccEEEEccc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEM 139 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~~~~ 139 (291)
..++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.++++++.++++ +++++++|+.++...++||+|+++.+
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~-~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc
Confidence 35688999999999999999998853 27999999999999999999999885 49999999999876688999999765
Q ss_pred ccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 140 FEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
. ....+++.+.++|||||++++.+..+
T Consensus 202 ~----~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 202 V----RTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp S----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred h----hHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 3 33678889999999999999988764
No 156
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.63 E-value=1.7e-15 Score=129.82 Aligned_cols=113 Identities=19% Similarity=0.172 Sum_probs=96.0
Q ss_pred HcCCCCCCEEEEEcCCcchHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-----CCCc
Q 022836 58 RSRLEDGHTVLDVGCGWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----EASY 131 (291)
Q Consensus 58 ~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~~~~ 131 (291)
.+...++.+|||+|||+|..+..+++..++ .+|+++|+|+.+++.++++++..+++++.++.+|+.++.. .++|
T Consensus 78 ~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 78 VLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp HHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCE
T ss_pred HhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccC
Confidence 346678999999999999999999987655 7999999999999999999999988889999999988654 4789
Q ss_pred cEEEEccccccc------------------ccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 132 DRIYSIEMFEHM------------------KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 132 D~i~~~~~l~~~------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
|+|+++.+.... .....+++.+.+.|||||++++++.+.
T Consensus 158 D~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 999998544321 345789999999999999999987654
No 157
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.63 E-value=7.6e-16 Score=129.54 Aligned_cols=119 Identities=12% Similarity=0.138 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccC
Q 022836 47 AEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADIST 124 (291)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~ 124 (291)
.+...+..++.. .++.+|||||||+|..+..+++..| +.+|+++|+++.+++.++++++..+++ +++++.+|+.+
T Consensus 47 ~~~~~l~~l~~~---~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 123 (242)
T 3r3h_A 47 EQAQFMQMLIRL---TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALD 123 (242)
T ss_dssp HHHHHHHHHHHH---HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHhh---cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 334455555443 3567999999999999999998775 789999999999999999999998884 89999999977
Q ss_pred Ccc-------CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 125 FEM-------EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 125 ~~~-------~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
... .++||+|++... ..+...+++.+.++|||||++++......
T Consensus 124 ~l~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~~ 174 (242)
T 3r3h_A 124 TLHSLLNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFWD 174 (242)
T ss_dssp HHHHHHHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSSS
T ss_pred HHHHHhhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCccC
Confidence 432 378999999765 35677899999999999999999766543
No 158
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.63 E-value=3.3e-15 Score=128.11 Aligned_cols=115 Identities=18% Similarity=0.200 Sum_probs=98.4
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHh-C--CCCeEEEEccccCCc
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVL-E--LQNVEIIVADISTFE 126 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~-~--~~~v~~~~~d~~~~~ 126 (291)
....++..+...++.+|||+|||+|.++..+++. .|+.+|+++|+++.+++.+++++... + .+++.++.+|+.+.+
T Consensus 87 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 87 DAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 3456677778889999999999999999999985 46789999999999999999999887 5 468999999999876
Q ss_pred cC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 127 ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 127 ~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
.+ ++||+|+++ +++...+++.+.++|+|||.+++.+++.
T Consensus 167 ~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 167 LPDGSVDRAVLD-----MLAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp CCTTCEEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred CCCCceeEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 54 789999984 3456688999999999999999988754
No 159
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.62 E-value=3e-15 Score=124.39 Aligned_cols=104 Identities=23% Similarity=0.285 Sum_probs=89.9
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHC-----CCCEEEEEcCCHHHHHHHHHHHHHhC-----CCCeEEEEccccCCc---
Q 022836 60 RLEDGHTVLDVGCGWGSLSLYIAQKY-----SNCKITGICNSKTQKEFIEEQCRVLE-----LQNVEIIVADISTFE--- 126 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~la~~~-----~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~--- 126 (291)
...++.+|||+|||+|.++..+++.. |..+|+++|+++.+++.+++++...+ .+++.++.+|+.+..
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 35678999999999999999999875 34699999999999999999998887 568999999998854
Q ss_pred -cC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 127 -ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 127 -~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
.. ++||+|++..+++++ ++.+.+.|||||++++..+.
T Consensus 157 ~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 33 789999999988765 47788999999999998764
No 160
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.62 E-value=2.3e-15 Score=125.76 Aligned_cols=109 Identities=11% Similarity=0.117 Sum_probs=88.7
Q ss_pred HHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc---c-CCC
Q 022836 56 CERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE---M-EAS 130 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~-~~~ 130 (291)
++.+...++.+|||+|||+|.++..+++.. |+.+|+|+|+|+.+++.+.++++.. +++.++.+|+.+.. . .++
T Consensus 70 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~ 147 (233)
T 2ipx_A 70 VDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYRMLIAM 147 (233)
T ss_dssp CSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGGGGCCC
T ss_pred HheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhcccCCc
Confidence 344566788999999999999999999885 5689999999999998888888765 48999999998842 2 278
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
||+|+++.+ .......++.++.+.|||||.+++...
T Consensus 148 ~D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 148 VDVIFADVA--QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp EEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 999999765 223335568889999999999999654
No 161
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.62 E-value=1.8e-15 Score=139.13 Aligned_cols=114 Identities=22% Similarity=0.249 Sum_probs=95.7
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCC
Q 022836 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~ 130 (291)
.+.+++.+...++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+++++.+++ ++++++.+|+.+++.+++
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~ 224 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 224 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCC
Confidence 344555555567889999999999999999874 467999999998 99999999999888 589999999999766678
Q ss_pred ccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEe
Q 022836 131 YDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 131 ~D~i~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
||+|+++.+++++ ++....+..+.++|||||.+++..
T Consensus 225 fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 225 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred eEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 9999998887766 445667788899999999998644
No 162
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.62 E-value=4.3e-15 Score=125.21 Aligned_cols=106 Identities=19% Similarity=0.384 Sum_probs=87.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh--------CCCCeEEEEccccC-Cc--cC-C
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--------ELQNVEIIVADIST-FE--ME-A 129 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~v~~~~~d~~~-~~--~~-~ 129 (291)
.++.+|||||||+|.++..+++.+|..+|+|+|+|+.+++.+++++... +++++.++.+|+.+ ++ .+ +
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 4678999999999999999999988889999999999999999998876 77789999999987 33 23 7
Q ss_pred CccEEEEccccccccc--------HHHHHHHHHhccccCeeEEEEe
Q 022836 130 SYDRIYSIEMFEHMKN--------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 130 ~~D~i~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
.+|.|++..+-.+.+. ...+++.+.++|+|||.+++.+
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 8999986543322211 1579999999999999999854
No 163
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.62 E-value=1.3e-15 Score=126.31 Aligned_cols=115 Identities=16% Similarity=0.164 Sum_probs=94.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCc
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFE 126 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~ 126 (291)
...+..++.. .++.+|||+|||+|..+..+++..| +.+|+++|+++.+++.++++++..+++ +++++.+|+.+..
T Consensus 53 ~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 129 (225)
T 3tr6_A 53 AQLLALLVKL---MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTL 129 (225)
T ss_dssp HHHHHHHHHH---HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred HHHHHHHHHh---hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHH
Confidence 3344444432 3577999999999999999998876 789999999999999999999998884 5999999997642
Q ss_pred cC-------CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 127 ME-------ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 127 ~~-------~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
.. ++||+|++... ..+...+++.+.++|||||++++....
T Consensus 130 ~~~~~~~~~~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 130 AELIHAGQAWQYDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp HHHHTTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HHhhhccCCCCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 11 68999997664 356788999999999999999986653
No 164
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.62 E-value=4.5e-15 Score=127.27 Aligned_cols=112 Identities=19% Similarity=0.176 Sum_probs=97.0
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCC
Q 022836 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEAS 130 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~ 130 (291)
..++..+...++.+|||+|||+|.++..+++. .|+.+|+++|+|+.+++.+++++...++ +++.++.+|+.+....++
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 181 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKD 181 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCS
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCc
Confidence 45666778888999999999999999999988 5678999999999999999999988887 589999999988633378
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
||+|+++ .++...+++.+.++|+|||.+++..+.
T Consensus 182 ~D~V~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 182 VDALFLD-----VPDPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp EEEEEEC-----CSCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred cCEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9999984 345678899999999999999997763
No 165
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.61 E-value=3.4e-15 Score=123.47 Aligned_cols=94 Identities=16% Similarity=0.255 Sum_probs=84.2
Q ss_pred CCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccccc
Q 022836 64 GHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFEH 142 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~l~~ 142 (291)
+.+|||+|||+|.++..+++. +|+|+|+.+++.++++ ++.++.+|+.+++.+ ++||+|++..++++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-------GVFVLKGTAENLPLKDESFDFALMVTTICF 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-------TCEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-------CCEEEEcccccCCCCCCCeeEEEEcchHhh
Confidence 789999999999999887642 9999999999888765 578999999887765 78999999999999
Q ss_pred cccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 143 MKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 143 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+++...+++++.++|+|||.+++..+..
T Consensus 115 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 115 VDDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ccCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 9999999999999999999999988754
No 166
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.61 E-value=3.5e-15 Score=131.00 Aligned_cols=107 Identities=19% Similarity=0.153 Sum_probs=90.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC--CeEEEEccccCCcc-----CCCccEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVADISTFEM-----EASYDRI 134 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~~-----~~~~D~i 134 (291)
.++.+|||+|||+|.++..+++. +++|+++|+|+.+++.++++++.++++ ++.++++|+.++.. .++||+|
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA--GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCCCcEEEcccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 45789999999999999999986 569999999999999999999999885 49999999988542 3689999
Q ss_pred EEcccc----------cccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 135 YSIEMF----------EHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 135 ~~~~~l----------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+++.+. .+..++..+++.+.++|+|||.+++.....
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 997653 223467889999999999999987766543
No 167
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.61 E-value=1.8e-15 Score=129.05 Aligned_cols=103 Identities=16% Similarity=0.215 Sum_probs=83.7
Q ss_pred CCCEEEEEcCCcch----HHHHHHHHCC----CCEEEEEcCCHHHHHHHHHHHHH-----------------------hC
Q 022836 63 DGHTVLDVGCGWGS----LSLYIAQKYS----NCKITGICNSKTQKEFIEEQCRV-----------------------LE 111 (291)
Q Consensus 63 ~~~~vLDiGcG~G~----~~~~la~~~~----~~~v~~vD~s~~~~~~a~~~~~~-----------------------~~ 111 (291)
++.+|||+|||+|. ++..+++..+ +.+|+|+|+|+.+++.|++++-. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 46799999999998 6666776643 46999999999999999886410 01
Q ss_pred -------C-CCeEEEEccccCCccC--CCccEEEEcccccccccH--HHHHHHHHhccccCeeEEE
Q 022836 112 -------L-QNVEIIVADISTFEME--ASYDRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 112 -------~-~~v~~~~~d~~~~~~~--~~~D~i~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~ 165 (291)
+ ++|.|.++|+.+.+.+ ++||+|+|.+++.|+++. .++++++.+.|+|||+|++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 0 2699999999985433 789999999999999544 7899999999999999988
No 168
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.61 E-value=4.4e-15 Score=127.76 Aligned_cols=116 Identities=14% Similarity=0.152 Sum_probs=92.2
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCC
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEA 129 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~ 129 (291)
+++.+++.+...++.+|||+|||+|.++..+++. |+.+|+|+|+|+.+++.+++++...+++ ++.++++|+.+.. ++
T Consensus 111 lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~-~~ 188 (284)
T 1nv8_A 111 LVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF-KE 188 (284)
T ss_dssp HHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG-GG
T ss_pred HHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc-cc
Confidence 3344444333335679999999999999999998 8999999999999999999999998885 4999999998843 25
Q ss_pred Cc---cEEEEcccccccc-------------------cHHHHHHHHH-hccccCeeEEEEee
Q 022836 130 SY---DRIYSIEMFEHMK-------------------NYQNLLKKIS-KWMKEDTLLFVHHF 168 (291)
Q Consensus 130 ~~---D~i~~~~~l~~~~-------------------~~~~~l~~~~-~~LkpgG~l~~~~~ 168 (291)
+| |+|+++.++.... +...+++++. +.|+|||++++...
T Consensus 189 ~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 189 KFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp GTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred ccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 78 9999986543211 1126899999 99999999998543
No 169
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.61 E-value=1.3e-14 Score=120.54 Aligned_cols=110 Identities=24% Similarity=0.177 Sum_probs=91.0
Q ss_pred HHHHHcC--CCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhC-----CCCeEEEEccccCC
Q 022836 54 LYCERSR--LEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLE-----LQNVEIIVADISTF 125 (291)
Q Consensus 54 ~~~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~ 125 (291)
.+++.+. ..++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.+++++...+ .+++.++.+|+...
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG 145 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC
Confidence 4444443 5688999999999999999999874 44799999999999999999988765 35799999999865
Q ss_pred ccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 126 EME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 126 ~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
... ++||+|++..+++++. +.+.+.|||||++++....
T Consensus 146 ~~~~~~fD~i~~~~~~~~~~------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 146 YAEEAPYDAIHVGAAAPVVP------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred cccCCCcCEEEECCchHHHH------HHHHHhcCCCcEEEEEEec
Confidence 443 7899999998887653 5788999999999997654
No 170
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.60 E-value=4.9e-15 Score=132.41 Aligned_cols=111 Identities=18% Similarity=0.153 Sum_probs=94.1
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCC
Q 022836 52 LELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 130 (291)
...+++.+. ..++.+|||||||+|.++..+++++|..+++++|+ +.+++.+++ .++++++.+|+.+ +.+.
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~~- 267 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------LSGIEHVGGDMFA-SVPQ- 267 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCCC-
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc-CCCC-
Confidence 345666665 66788999999999999999999999899999999 888776653 2479999999987 4444
Q ss_pred ccEEEEcccccccccHH--HHHHHHHhccccCeeEEEEeeccC
Q 022836 131 YDRIYSIEMFEHMKNYQ--NLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
||+|++..++|++++.. .++++++++|||||++++.++..+
T Consensus 268 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 310 (372)
T 1fp1_D 268 GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILP 310 (372)
T ss_dssp EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 99999999999998776 999999999999999999876543
No 171
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.60 E-value=1.2e-14 Score=124.90 Aligned_cols=118 Identities=12% Similarity=0.178 Sum_probs=91.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcC-CHHHHHHHHHHH-----HHhCCC-----CeEE
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICN-SKTQKEFIEEQC-----RVLELQ-----NVEI 117 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~-s~~~~~~a~~~~-----~~~~~~-----~v~~ 117 (291)
..+.+.+.......++.+|||+|||+|.++..+++.. ..+|+++|+ |+.+++.+++++ +..++. ++.+
T Consensus 65 ~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~ 143 (281)
T 3bzb_A 65 RALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKV 143 (281)
T ss_dssp HHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEE
T ss_pred HHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEE
Confidence 4445555554444578899999999999999988762 349999999 899999999998 555543 6888
Q ss_pred EEccccCCc-------cCCCccEEEEcccccccccHHHHHHHHHhccc---c--CeeEEEEe
Q 022836 118 IVADISTFE-------MEASYDRIYSIEMFEHMKNYQNLLKKISKWMK---E--DTLLFVHH 167 (291)
Q Consensus 118 ~~~d~~~~~-------~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~Lk---p--gG~l~~~~ 167 (291)
...|+.+.. ..++||+|++..++++.++...+++.+.++|+ | ||.+++..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 144 VPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp EECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred EEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 877765521 13789999999999999999999999999999 9 99877743
No 172
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.60 E-value=6.6e-15 Score=122.37 Aligned_cols=106 Identities=17% Similarity=0.156 Sum_probs=86.6
Q ss_pred HHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----cCCC
Q 022836 56 CERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----MEAS 130 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~~ 130 (291)
++.+...++.+|||+|||+|.++..+++.. ++.+|+|+|+|+.+++.++++++.. +++.++.+|+.+.. .+++
T Consensus 66 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 66 LKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGTTTCCC
T ss_pred HHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhhcccCC
Confidence 334446788999999999999999999874 4579999999999999998887654 58999999998732 2368
Q ss_pred ccEEEEcccccccccH-HHHHHHHHhccccCeeEEEE
Q 022836 131 YDRIYSIEMFEHMKNY-QNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~-~~~l~~~~~~LkpgG~l~~~ 166 (291)
||+|++..+ .++. ..++.++.++|||||.+++.
T Consensus 144 ~D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 144 VDVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 999998765 2333 34599999999999999987
No 173
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.60 E-value=6.5e-15 Score=128.58 Aligned_cols=115 Identities=16% Similarity=0.089 Sum_probs=94.6
Q ss_pred HHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-CCCccE
Q 022836 56 CERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-EASYDR 133 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~D~ 133 (291)
...+...++.+|||+|||+|..+..+++..+ ..+|+++|+|+.+++.++++++..+++++.++++|+.+++. .++||+
T Consensus 111 ~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~ 190 (315)
T 1ixk_A 111 PVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDK 190 (315)
T ss_dssp HHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEE
T ss_pred HHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCE
Confidence 3445678899999999999999999998863 47999999999999999999999998889999999998754 378999
Q ss_pred EEEcccc------ccccc----------------HHHHHHHHHhccccCeeEEEEeecc
Q 022836 134 IYSIEMF------EHMKN----------------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 134 i~~~~~l------~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
|+++.+. ...++ ...+++++.++|||||++++++.+.
T Consensus 191 Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 191 ILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp EEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 9996542 21111 2589999999999999999987643
No 174
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.60 E-value=1e-14 Score=122.98 Aligned_cols=116 Identities=17% Similarity=0.159 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccC
Q 022836 47 AEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADIST 124 (291)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~ 124 (291)
.+...+..++.. .++.+|||||||+|..+..+++..| +.+|+++|+++.+++.++++++..++ ++++++.+|+.+
T Consensus 66 ~~~~ll~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 142 (247)
T 1sui_A 66 DEGQFLSMLLKL---INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALP 142 (247)
T ss_dssp HHHHHHHHHHHH---TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred HHHHHHHHHHHh---hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHH
Confidence 334445555443 3567999999999999999999876 78999999999999999999999888 479999999976
Q ss_pred Cc--c------CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 125 FE--M------EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 125 ~~--~------~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
.. . .++||+|++... ..+...+++.+.++|||||++++...
T Consensus 143 ~l~~l~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 143 VLDEMIKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp HHHHHHHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred HHHHHHhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 42 1 478999999754 35678899999999999999988654
No 175
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.59 E-value=8e-15 Score=128.76 Aligned_cols=105 Identities=23% Similarity=0.321 Sum_probs=89.1
Q ss_pred cCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-CCccEEEE
Q 022836 59 SRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME-ASYDRIYS 136 (291)
Q Consensus 59 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-~~~D~i~~ 136 (291)
+...++.+|||+|||+|.++..+++. +..+|+|+|+| .+++.++++++.+++ ++++++.+|+.+++.+ ++||+|++
T Consensus 34 ~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs 111 (328)
T 1g6q_1 34 KDLFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIIS 111 (328)
T ss_dssp HHHHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEE
T ss_pred HhhcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEE
Confidence 33456789999999999999999876 34599999999 599999999998888 4699999999998766 88999999
Q ss_pred ccccc---ccccHHHHHHHHHhccccCeeEEE
Q 022836 137 IEMFE---HMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 137 ~~~l~---~~~~~~~~l~~~~~~LkpgG~l~~ 165 (291)
..+.+ +...+..++..+.++|||||.++.
T Consensus 112 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 112 EWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred eCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 86543 345678899999999999999874
No 176
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.59 E-value=5e-15 Score=131.43 Aligned_cols=103 Identities=31% Similarity=0.395 Sum_probs=87.2
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccEEEEccc-
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSIEM- 139 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~D~i~~~~~- 139 (291)
.++.+|||||||+|.++..+++.. ..+|++||.|+ +++.|+++++.+++ ++|.++.+|++++..++++|+|+|..+
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~ 159 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMG 159 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCB
T ss_pred cCCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccc
Confidence 368899999999999998888763 45899999986 88999999999998 579999999999988899999998443
Q ss_pred --ccccccHHHHHHHHHhccccCeeEEEE
Q 022836 140 --FEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 140 --l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+.+-..+..++....++|||||.++-.
T Consensus 160 ~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 160 YGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccccchhhhHHHHHHhhCCCCceECCc
Confidence 333356788999999999999998653
No 177
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.59 E-value=2.1e-14 Score=120.79 Aligned_cols=111 Identities=15% Similarity=0.160 Sum_probs=95.7
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCc-cCCC
Q 022836 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFE-MEAS 130 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~-~~~~ 130 (291)
..++..+...++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++....++ +++.+..+|+.+.. ..+.
T Consensus 81 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (248)
T 2yvl_A 81 FYIALKLNLNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGI 158 (248)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTC
T ss_pred HHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCc
Confidence 45566677788999999999999999999988 78999999999999999999988887 68999999998865 3478
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
||+|+++ .++...+++.+.++|+|||.+++..+..
T Consensus 159 ~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 159 FHAAFVD-----VREPWHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp BSEEEEC-----SSCGGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred ccEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 9999984 3456688999999999999999987643
No 178
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.59 E-value=1.3e-14 Score=128.71 Aligned_cols=116 Identities=16% Similarity=0.090 Sum_probs=98.0
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCcc
Q 022836 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYD 132 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D 132 (291)
..+++..+..+..+|||||||+|.++..+++++|+.+++..|+ |.+++.++++....+.++|+++.+|+.+.+. ..+|
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~-~~~D 246 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL-PEAD 246 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCC-CCCS
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCC-CCce
Confidence 4455666677788999999999999999999999999999998 8899999887765555789999999987544 4579
Q ss_pred EEEEcccccccccH--HHHHHHHHhccccCeeEEEEeecc
Q 022836 133 RIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 133 ~i~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+|++..++|++++. .++|+++++.|+|||++++.+...
T Consensus 247 ~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~ 286 (353)
T 4a6d_A 247 LYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLL 286 (353)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCC
T ss_pred EEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeee
Confidence 99999999999665 578999999999999999987644
No 179
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.59 E-value=9.3e-15 Score=120.05 Aligned_cols=113 Identities=19% Similarity=0.205 Sum_probs=92.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCC-
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTF- 125 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~- 125 (291)
...+..++.. .++.+|||+|||+|..+..+++..| +.+|+++|+|+.+++.++++++..++. +++++.+|+.+.
T Consensus 45 ~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 121 (210)
T 3c3p_A 45 GRLLYLLARI---KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIA 121 (210)
T ss_dssp HHHHHHHHHH---HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHH
T ss_pred HHHHHHHHHh---hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHh
Confidence 3344444432 3567999999999999999998876 789999999999999999999888873 699999999764
Q ss_pred cc-CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 126 EM-EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 126 ~~-~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
+. ++ ||+|++... ..+...+++.+.++|||||++++...
T Consensus 122 ~~~~~-fD~v~~~~~---~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 122 AGQRD-IDILFMDCD---VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp TTCCS-EEEEEEETT---TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred ccCCC-CCEEEEcCC---hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 22 26 999998743 35778999999999999999988654
No 180
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.59 E-value=9.5e-15 Score=130.31 Aligned_cols=111 Identities=18% Similarity=0.198 Sum_probs=91.6
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCC
Q 022836 52 LELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 130 (291)
...+++.+. ..+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ .++++++.+|+.+ +.+..
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~p~~ 262 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA------FSGVEHLGGDMFD-GVPKG 262 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCCCC
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh------cCCCEEEecCCCC-CCCCC
Confidence 344555555 56788999999999999999999999999999999 887766543 2479999999987 44444
Q ss_pred ccEEEEcccccccccH--HHHHHHHHhccccCeeEEEEeeccC
Q 022836 131 YDRIYSIEMFEHMKNY--QNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
|+|++..++|++++. .+++++++++|||||++++.+...+
T Consensus 263 -D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 263 -DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp -SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred -CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 999999999988654 5799999999999999999877543
No 181
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.59 E-value=8.5e-15 Score=121.80 Aligned_cols=112 Identities=18% Similarity=0.118 Sum_probs=91.8
Q ss_pred HHHHHHHc--CCCCCCEEEEEcCCcchHHHHHHHHCC------CCEEEEEcCCHHHHHHHHHHHHHhC-----CCCeEEE
Q 022836 52 LELYCERS--RLEDGHTVLDVGCGWGSLSLYIAQKYS------NCKITGICNSKTQKEFIEEQCRVLE-----LQNVEII 118 (291)
Q Consensus 52 ~~~~~~~~--~~~~~~~vLDiGcG~G~~~~~la~~~~------~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~ 118 (291)
...+++.+ ...++.+|||+|||+|.++..+++..+ ..+|+++|+++.+++.+++++...+ .+++.++
T Consensus 71 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 150 (227)
T 1r18_A 71 HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV 150 (227)
T ss_dssp HHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEE
Confidence 34445555 357789999999999999999998652 2599999999999999999988765 4589999
Q ss_pred EccccCCccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 119 VADISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 119 ~~d~~~~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
.+|+.+.... ++||+|++..+++++. +.+.+.|||||++++....
T Consensus 151 ~~d~~~~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 151 EGDGRKGYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp ESCGGGCCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred ECCcccCCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEec
Confidence 9999873333 7899999999998764 6789999999999997654
No 182
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.58 E-value=7.3e-15 Score=116.60 Aligned_cols=108 Identities=15% Similarity=0.139 Sum_probs=88.5
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc---
Q 022836 52 LELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--- 126 (291)
Q Consensus 52 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--- 126 (291)
+..+++.+. ..++.+|||+|||+|.++..+++.+ ++.+++++|+++ +++. +++.++.+|+.+.+
T Consensus 10 l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~ 78 (180)
T 1ej0_A 10 LDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMK 78 (180)
T ss_dssp HHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHH
T ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhh
Confidence 444555544 5678899999999999999999884 568999999999 6432 47999999998875
Q ss_pred -----cC-CCccEEEEcccccccccH-----------HHHHHHHHhccccCeeEEEEeecc
Q 022836 127 -----ME-ASYDRIYSIEMFEHMKNY-----------QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 127 -----~~-~~~D~i~~~~~l~~~~~~-----------~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
.+ ++||+|+++.++++..+. ..+++.+.++|+|||.+++..+..
T Consensus 79 ~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 79 ALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp HHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred hhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 44 789999999988877554 689999999999999999977654
No 183
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.58 E-value=4.9e-15 Score=117.78 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=79.7
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccccc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 141 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~l~ 141 (291)
.++.+|||+|||+|.++..+++. + +|+|+|+|+.+++. .+++.++++|+.+....++||+|+++.+++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~--~-~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~ 89 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR--N-TVVSTDLNIRALES---------HRGGNLVRADLLCSINQESVDVVVFNPPYV 89 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT--S-EEEEEESCHHHHHT---------CSSSCEEECSTTTTBCGGGCSEEEECCCCB
T ss_pred CCCCeEEEeccCccHHHHHHHhc--C-cEEEEECCHHHHhc---------ccCCeEEECChhhhcccCCCCEEEECCCCc
Confidence 45679999999999999999987 4 99999999998876 247899999998843338899999999988
Q ss_pred cccc---------HHHHHHHHHhccccCeeEEEEeecc
Q 022836 142 HMKN---------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 142 ~~~~---------~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+..+ ...+++++.+.| |||.+++..+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~ 126 (170)
T 3q87_B 90 PDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA 126 (170)
T ss_dssp TTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG
T ss_pred cCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC
Confidence 6543 356888888888 999999977644
No 184
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.58 E-value=1.6e-14 Score=128.58 Aligned_cols=111 Identities=18% Similarity=0.143 Sum_probs=92.7
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCC
Q 022836 52 LELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEAS 130 (291)
Q Consensus 52 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 130 (291)
...+++.+. ..+..+|||||||+|..+..+++++|+.+++++|+ +.+++.+++ .++++++.+|+.+ +.+..
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~~~-~~p~~ 260 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ------FPGVTHVGGDMFK-EVPSG 260 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCCCC
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh------cCCeEEEeCCcCC-CCCCC
Confidence 455666665 67789999999999999999999999999999999 887766543 2489999999988 54544
Q ss_pred ccEEEEccccccccc--HHHHHHHHHhccccCeeEEEEeeccC
Q 022836 131 YDRIYSIEMFEHMKN--YQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
|+|++..++|++++ ..++++++++.|||||++++.+...+
T Consensus 261 -D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 261 -DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp -SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred -CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99999999998854 56899999999999999999877543
No 185
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.57 E-value=8.4e-15 Score=122.81 Aligned_cols=105 Identities=18% Similarity=0.151 Sum_probs=89.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCcc------------
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM------------ 127 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~------------ 127 (291)
.++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.+++++...+++ ++.++.+|+.+...
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 4678999999999999999999876 689999999999999999999988884 59999999876321
Q ss_pred -----C-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 128 -----E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 128 -----~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
. ++||+|++.... .+...+++.+.+.|+|||++++....
T Consensus 139 ~~f~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDADK---ENYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp TTTCCSTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ccccCCCCCcCEEEEeCCH---HHHHHHHHHHHHHcCCCeEEEEEccc
Confidence 2 679999998554 56678999999999999999986543
No 186
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.57 E-value=3.6e-15 Score=140.24 Aligned_cols=107 Identities=21% Similarity=0.306 Sum_probs=89.7
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--c-CCCccEEEEcc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--M-EASYDRIYSIE 138 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~-~~~~D~i~~~~ 138 (291)
..+.+|||||||.|.++..|++. |++|+|||+|+.+++.|+..+.+.+.-++++.+++++++. . +++||+|+|..
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc
Confidence 35689999999999999999987 8999999999999999999998877547999999999873 2 27899999999
Q ss_pred cccccccHHHH--HHHHHhccccCeeEEEEeecc
Q 022836 139 MFEHMKNYQNL--LKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 139 ~l~~~~~~~~~--l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+++|+++...+ +..+.+.|+++|..++..+..
T Consensus 143 ~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 143 VFHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp CHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred chhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 99999876533 445677788888776655543
No 187
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.57 E-value=3.6e-14 Score=117.96 Aligned_cols=105 Identities=14% Similarity=0.078 Sum_probs=82.7
Q ss_pred cCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----CCCccE
Q 022836 59 SRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----EASYDR 133 (291)
Q Consensus 59 ~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----~~~~D~ 133 (291)
+.+.++.+|||+|||+|..+..+++.. |..+|+|+|+|+.+++.+.+.++.. .++.++.+|+..... .++||+
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~~~~~~~D~ 149 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYKSVVENVDV 149 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTTTTCCCEEE
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhhccccceEE
Confidence 447899999999999999999999863 5679999999999986666555443 489999999986431 268999
Q ss_pred EEEcccccccccHHHHH-HHHHhccccCeeEEEEee
Q 022836 134 IYSIEMFEHMKNYQNLL-KKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 134 i~~~~~l~~~~~~~~~l-~~~~~~LkpgG~l~~~~~ 168 (291)
|+++.+. ++...++ ..+.+.|||||.+++...
T Consensus 150 I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 150 LYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp EEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 9998655 4555544 556669999999998753
No 188
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.56 E-value=1.8e-14 Score=117.31 Aligned_cols=107 Identities=20% Similarity=0.260 Sum_probs=83.8
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCC--CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--
Q 022836 52 LELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYS--NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-- 126 (291)
Q Consensus 52 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 126 (291)
+..+.+... ..++.+|||+|||+|.++..++++.+ +.+|+|+|+|+.. ..+++.++++|+.+..
T Consensus 10 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~ 78 (201)
T 2plw_A 10 LIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMN 78 (201)
T ss_dssp HHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSC
T ss_pred HHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhh
Confidence 344555544 46788999999999999999999886 6899999999841 2347899999998865
Q ss_pred -----------------------cC-CCccEEEEccccccc----ccH-------HHHHHHHHhccccCeeEEEEeec
Q 022836 127 -----------------------ME-ASYDRIYSIEMFEHM----KNY-------QNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 127 -----------------------~~-~~~D~i~~~~~l~~~----~~~-------~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
.+ .+||+|+++.++++. .+. ..+++.+.++|||||.+++..+.
T Consensus 79 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 79 NIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp CC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 34 689999998877653 222 24788999999999999987654
No 189
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.56 E-value=1.7e-14 Score=122.88 Aligned_cols=98 Identities=19% Similarity=0.239 Sum_probs=84.2
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~l 140 (291)
.++.+|||+|||+|.++..+++..++.+|+|+|+|+.+++.++++. +++.+..+|+.+++.. ++||+|++..+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~~ 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPFSDTSMDAIIRIYAP 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSBCTTCEEEEEEESCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCCCCCceeEEEEeCCh
Confidence 5678999999999999999998877889999999999998887653 3689999999987765 789999997653
Q ss_pred cccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 141 EHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
..++++.++|||||.+++.+++..
T Consensus 159 -------~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 159 -------CKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp -------CCHHHHHHHEEEEEEEEEEEECTT
T ss_pred -------hhHHHHHHhcCCCcEEEEEEcCHH
Confidence 247889999999999999988654
No 190
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.56 E-value=2e-14 Score=118.61 Aligned_cols=105 Identities=12% Similarity=0.035 Sum_probs=89.2
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC-CCccEEEEccc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIEM 139 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-~~~D~i~~~~~ 139 (291)
+++.+|||||||+|.+++.+++..|..+|+++|+++.+++.|+++++.++++ +++++.+|..+...+ .+||+|+..++
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM 93 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCC
Confidence 5678999999999999999999877789999999999999999999999995 699999999753333 37999998665
Q ss_pred ccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 140 FEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
-. .-...++......|+|+|+++++..
T Consensus 94 Gg--~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 94 GG--RLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp CH--HHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred Ch--HHHHHHHHHHHHHhCCCCEEEEECC
Confidence 32 2257889999999999999988654
No 191
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.56 E-value=1.2e-14 Score=128.99 Aligned_cols=102 Identities=15% Similarity=0.206 Sum_probs=88.1
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMF 140 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~l 140 (291)
..++.+|||||||+|.++..+++++|+.+++++|+ +.+++.+++ .++++++.+|+.+ +.+ .||+|++..++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~p-~~D~v~~~~~l 256 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------SNNLTYVGGDMFT-SIP-NADAVLLKYIL 256 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------BTTEEEEECCTTT-CCC-CCSEEEEESCG
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------CCCcEEEeccccC-CCC-CccEEEeehhh
Confidence 45678999999999999999999999999999999 998876654 2369999999976 333 49999999999
Q ss_pred cccccHH--HHHHHHHhcccc---CeeEEEEeeccC
Q 022836 141 EHMKNYQ--NLLKKISKWMKE---DTLLFVHHFCHK 171 (291)
Q Consensus 141 ~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~ 171 (291)
|++++.. .++++++++||| ||++++.++..+
T Consensus 257 h~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 257 HNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp GGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred ccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 9998776 999999999999 999999876543
No 192
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.56 E-value=2.1e-14 Score=120.38 Aligned_cols=115 Identities=18% Similarity=0.157 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCC
Q 022836 48 EKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTF 125 (291)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~ 125 (291)
+...+..++.. .++.+|||||||+|..+..+++..| +.+|+++|+++.+++.++++++..+++ +++++.+|+.+.
T Consensus 58 ~~~~l~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~ 134 (237)
T 3c3y_A 58 AGQLMSFVLKL---VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLA 134 (237)
T ss_dssp HHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred HHHHHHHHHHh---hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 34455555443 3567999999999999999999876 789999999999999999999998884 699999998764
Q ss_pred c--c------CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 126 E--M------EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 126 ~--~------~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
. . .++||+|++.... .+...+++.+.+.|+|||++++...
T Consensus 135 l~~l~~~~~~~~~fD~I~~d~~~---~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 135 LDNLLQGQESEGSYDFGFVDADK---PNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp HHHHHHSTTCTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred HHHHHhccCCCCCcCEEEECCch---HHHHHHHHHHHHhcCCCeEEEEecC
Confidence 2 1 3689999987543 5678899999999999999988654
No 193
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.56 E-value=2.3e-14 Score=123.68 Aligned_cols=108 Identities=12% Similarity=0.080 Sum_probs=84.3
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhC-----CCCeEEEEccccCCcc--CCCccEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE-----LQNVEIIVADISTFEM--EASYDRI 134 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~--~~~~D~i 134 (291)
+++.+|||||||+|..++.+++..+..+|++||+|+.+++.+++++...+ .++++++.+|+.+... .++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45789999999999999999987666899999999999999999876542 2489999999988643 2789999
Q ss_pred EEccccccccc--H--HHHHHHHHhccccCeeEEEEeec
Q 022836 135 YSIEMFEHMKN--Y--QNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 135 ~~~~~l~~~~~--~--~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
++.......+. . ..+++.+.++|+|||++++...+
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 99665432222 1 67999999999999999997654
No 194
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.56 E-value=9.2e-15 Score=121.52 Aligned_cols=90 Identities=12% Similarity=0.200 Sum_probs=78.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcccc-CCcc--CCCccEEEEcc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS-TFEM--EASYDRIYSIE 138 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~--~~~~D~i~~~~ 138 (291)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++ .++++++++|+. .++. .++||+|+++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~~~~fD~v~~~- 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELPAGLGAPFGLIVSR- 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCTTCCCCEEEEEEE-
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCCcCCCCEEEEEeC-
Confidence 56789999999999999999987 78999999999999998876 347999999995 4443 3789999997
Q ss_pred cccccccHHHHHHHHHhccccCeeEE
Q 022836 139 MFEHMKNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 139 ~l~~~~~~~~~l~~~~~~LkpgG~l~ 164 (291)
.+...+++++.++|||||.++
T Consensus 119 -----~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 -----RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp -----SCCSGGGGGHHHHEEEEEEEE
T ss_pred -----CCHHHHHHHHHHHcCCCcEEE
Confidence 356778999999999999998
No 195
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.56 E-value=2.2e-14 Score=126.37 Aligned_cols=113 Identities=19% Similarity=0.285 Sum_probs=90.7
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHhC-----------CCCeEEEE
Q 022836 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVLE-----------LQNVEIIV 119 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~-----------~~~v~~~~ 119 (291)
...++..+...++.+|||+|||+|.++..+++. .|..+|+++|+++.+++.|++++...+ .++++++.
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 445566667889999999999999999999987 455899999999999999999988643 24799999
Q ss_pred ccccCCc--cC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 120 ADISTFE--ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 120 ~d~~~~~--~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
+|+.+.. .+ ++||+|+++.. ++..+++.+.++|+|||.+++..+.
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~~~-----~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALDML-----NPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp SCTTCCC-------EEEEEECSS-----STTTTHHHHGGGEEEEEEEEEEESS
T ss_pred CChHHcccccCCCCeeEEEECCC-----CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9998863 23 67999998543 3344889999999999999987653
No 196
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.55 E-value=2.7e-14 Score=118.06 Aligned_cols=105 Identities=14% Similarity=0.055 Sum_probs=90.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC-CCccEEEEccc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIEM 139 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-~~~D~i~~~~~ 139 (291)
+++.+|||||||+|.+++.+++..|..+|+++|+++.+++.|+++++.+++. +++++.+|..+...+ .+||+|++.++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 5678999999999999999998876779999999999999999999999984 699999999986655 47999987665
Q ss_pred ccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 140 FEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
.. .-...++....+.|+++|.|+++..
T Consensus 100 Gg--~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 100 GG--RLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp CH--HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ch--HHHHHHHHHHHHHhCcCCEEEEECC
Confidence 53 2356788889999999999988764
No 197
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.55 E-value=1.6e-14 Score=120.16 Aligned_cols=104 Identities=13% Similarity=0.100 Sum_probs=89.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc----C---CCcc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM----E---ASYD 132 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~----~---~~~D 132 (291)
.++.+|||+|||+|..+..+++..+ +.+|+++|+++.+++.++++++..++ ++++++.+|+.+... . ++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 4578999999999999999998765 68999999999999999999998887 589999999876421 1 5799
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 133 ~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
+|++... ..+...+++.+.+.|+|||++++...
T Consensus 148 ~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 148 VAVVDAD---KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEECSC---STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 9999765 35677899999999999999998654
No 198
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.55 E-value=1.5e-14 Score=120.83 Aligned_cols=115 Identities=12% Similarity=0.175 Sum_probs=93.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCc
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFE 126 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~ 126 (291)
...+..++.. .++.+|||+|||+|..+..+++..| +.+|+++|+++.+++.+++++...++ ++++++.+|+.+..
T Consensus 61 ~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l 137 (232)
T 3cbg_A 61 AQFLGLLISL---TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATL 137 (232)
T ss_dssp HHHHHHHHHH---HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHH
T ss_pred HHHHHHHHHh---cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 3444444432 3567999999999999999998775 67999999999999999999998888 46999999986531
Q ss_pred ----c-C--CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 127 ----M-E--ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 127 ----~-~--~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
. . ++||+|++.... .++..+++.+.++|+|||++++....
T Consensus 138 ~~l~~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 138 EQLTQGKPLPEFDLIFIDADK---RNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp HHHHTSSSCCCEEEEEECSCG---GGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred HHHHhcCCCCCcCEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 1 1 679999987653 56788999999999999999986553
No 199
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.55 E-value=2.2e-14 Score=124.14 Aligned_cols=107 Identities=16% Similarity=0.128 Sum_probs=87.3
Q ss_pred CCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---CCCccEEEEcccc
Q 022836 64 GHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---EASYDRIYSIEMF 140 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---~~~~D~i~~~~~l 140 (291)
..+|||||||+|.++..+++.+|+.+|++||+++.+++.+++++.....++++++.+|+.++.. .++||+|++....
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 3599999999999999999988899999999999999999998754333589999999987532 2789999996543
Q ss_pred ccc-c---cHHHHHHHHHhccccCeeEEEEeecc
Q 022836 141 EHM-K---NYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 141 ~~~-~---~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
... + ...++++.++++|+|||++++.....
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 321 1 12689999999999999999877643
No 200
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.55 E-value=3.2e-14 Score=118.57 Aligned_cols=106 Identities=11% Similarity=0.069 Sum_probs=90.4
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC-CCccEEEEcc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME-ASYDRIYSIE 138 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-~~~D~i~~~~ 138 (291)
.+++.+|||||||+|.+++.+++..|..+|+++|+++.+++.|+++++.+++. ++++..+|..+...+ .+||+|++.+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 35678999999999999999998876679999999999999999999999984 699999999886655 3699998765
Q ss_pred cccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 139 MFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 139 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
+-. .-...++....+.|+++|+|+++..
T Consensus 99 mGg--~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 99 MGG--TLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp ECH--HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred Cch--HHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 543 2356788999999999999998764
No 201
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.54 E-value=2.1e-13 Score=121.82 Aligned_cols=105 Identities=10% Similarity=0.073 Sum_probs=89.7
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC-Ccc--CCCccEEEEc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FEM--EASYDRIYSI 137 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~--~~~~D~i~~~ 137 (291)
..++.+|||+| |+|.++..++...+..+|+++|+|+.+++.++++++..|+++++++.+|+.+ ++. .++||+|+++
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEEC
Confidence 34678999999 9999999999886668999999999999999999999888789999999998 553 2689999999
Q ss_pred ccccccccHHHHHHHHHhccccCeeE-EEEe
Q 022836 138 EMFEHMKNYQNLLKKISKWMKEDTLL-FVHH 167 (291)
Q Consensus 138 ~~l~~~~~~~~~l~~~~~~LkpgG~l-~~~~ 167 (291)
.++.... ...+++++.++|||||.+ ++..
T Consensus 249 ~p~~~~~-~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 249 PPETLEA-IRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp CCSSHHH-HHHHHHHHHHTBCSTTCEEEEEE
T ss_pred CCCchHH-HHHHHHHHHHHcccCCeEEEEEE
Confidence 8775443 588999999999999954 4444
No 202
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.54 E-value=3e-14 Score=123.70 Aligned_cols=109 Identities=13% Similarity=0.026 Sum_probs=85.9
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH---h-CCCCeEEEEccccCCcc---CCCccE
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV---L-ELQNVEIIVADISTFEM---EASYDR 133 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~---~-~~~~v~~~~~d~~~~~~---~~~~D~ 133 (291)
..++.+|||||||+|..+..+++..+..+|+++|+|+.+++.+++++.. . ..++++++.+|+.+... .++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 4567899999999999999999765667999999999999999988742 1 12479999999988642 478999
Q ss_pred EEEcccccccccH----HHHHHHHHhccccCeeEEEEeec
Q 022836 134 IYSIEMFEHMKNY----QNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 134 i~~~~~l~~~~~~----~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
|+++.+....+.. ..+++.+.++|||||++++...+
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 9997766443222 68899999999999999997543
No 203
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.52 E-value=3.4e-14 Score=121.13 Aligned_cols=105 Identities=21% Similarity=0.217 Sum_probs=90.0
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccEEEEccc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSIEM 139 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~D~i~~~~~ 139 (291)
..+|.+|||+|||+|.+++.+++.. .++|+++|+|+.+++.+++|++.+++ +++.++++|..++.....||.|+++.+
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCC
Confidence 3678999999999999999999874 57999999999999999999999999 469999999999876688999998865
Q ss_pred ccccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 140 FEHMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
.. ...++..+.++|||||++.+.....
T Consensus 202 ~~----~~~~l~~a~~~lk~gG~ih~~~~~~ 228 (278)
T 3k6r_A 202 VR----THEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp SS----GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred Cc----HHHHHHHHHHHcCCCCEEEEEeeec
Confidence 43 3456777888999999988766544
No 204
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.52 E-value=1.1e-13 Score=126.62 Aligned_cols=115 Identities=16% Similarity=0.159 Sum_probs=95.5
Q ss_pred HHHcCCCCCCEEEEEcCCcchHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cC-CCc
Q 022836 56 CERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--ME-ASY 131 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~-~~~ 131 (291)
...+...++.+|||+|||+|..+..+++..++ .+|+++|+++.+++.++++++..|++++.++.+|+.+.+ .+ ++|
T Consensus 252 ~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~f 331 (450)
T 2yxl_A 252 SIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVA 331 (450)
T ss_dssp HHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCE
T ss_pred HHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCC
Confidence 34456788999999999999999999998755 799999999999999999999999888999999998875 33 679
Q ss_pred cEEEEccc------ccccccH----------------HHHHHHHHhccccCeeEEEEeecc
Q 022836 132 DRIYSIEM------FEHMKNY----------------QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 132 D~i~~~~~------l~~~~~~----------------~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
|+|+++.+ +...++. ..+++.+.+.|||||.+++++++.
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99997432 2222222 578999999999999999987754
No 205
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.51 E-value=6.4e-14 Score=125.55 Aligned_cols=108 Identities=19% Similarity=0.195 Sum_probs=89.8
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC--CeEEEEccccCCcc-----CCCccEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVADISTFEM-----EASYDRI 134 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~~-----~~~~D~i 134 (291)
.++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.|+++++.++++ +++++++|+.+... ..+||+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 567899999999999999999752 348999999999999999999999985 89999999987422 2589999
Q ss_pred EEccccc-----cc----ccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 135 YSIEMFE-----HM----KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 135 ~~~~~l~-----~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+++.+.. .. .++..++..+.+.|+|||.+++++...
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 9977652 22 345668888899999999999877544
No 206
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.51 E-value=5.2e-14 Score=121.12 Aligned_cols=113 Identities=14% Similarity=0.236 Sum_probs=89.4
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM 127 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~ 127 (291)
...++.+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...+. ++++++++|+.+.+.
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~ 91 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL 91 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc
Confidence 456677888888888999999999999999999988 67999999999999999998876655 579999999998755
Q ss_pred CCCccEEEEcccccccccH-HHHHH--------------HH--HhccccCeeEE
Q 022836 128 EASYDRIYSIEMFEHMKNY-QNLLK--------------KI--SKWMKEDTLLF 164 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~~~~-~~~l~--------------~~--~~~LkpgG~l~ 164 (291)
+ .||+|+++.+++..... ..+++ ++ +++|+|||.++
T Consensus 92 ~-~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 92 P-FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp C-CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred h-hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 4 79999998776554221 12221 11 35889999764
No 207
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.51 E-value=3.3e-14 Score=125.76 Aligned_cols=108 Identities=15% Similarity=0.245 Sum_probs=85.6
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCC------cchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcccc
Q 022836 51 MLELYCERSRLEDGHTVLDVGCG------WGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS 123 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG------~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 123 (291)
.++.++..+. .++.+||||||| +|..+..+++. +|+++|+|+|+|+.|. ...++++++++|+.
T Consensus 205 ~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~ 274 (419)
T 3sso_A 205 HYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQN 274 (419)
T ss_dssp HHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTT
T ss_pred HHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEeccc
Confidence 4445555444 346899999999 77777777765 5889999999999972 12258999999999
Q ss_pred CCccC-------CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 124 TFEME-------ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 124 ~~~~~-------~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
+++.. ++||+|++..+ ++..+....|+++.++|||||++++.+..
T Consensus 275 dlpf~~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 275 DAEFLDRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CHHHHHHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ccchhhhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 86543 78999999754 66788899999999999999999998765
No 208
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.51 E-value=6.2e-14 Score=125.61 Aligned_cols=106 Identities=21% Similarity=0.199 Sum_probs=91.7
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-----CCCccEEEEc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----EASYDRIYSI 137 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~~~~D~i~~~ 137 (291)
++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.++++++.++++++.++.+|+.+... ..+||+|+++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 6789999999999999999987 67999999999999999999999998779999999988643 3689999997
Q ss_pred ccccc---------cccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 138 EMFEH---------MKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 138 ~~l~~---------~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
.+... ..++..++..+.+.|+|||.+++++...
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 75422 2456789999999999999999987644
No 209
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.51 E-value=5e-14 Score=126.23 Aligned_cols=107 Identities=16% Similarity=0.192 Sum_probs=88.7
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc--CCCccEEEEccc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--EASYDRIYSIEM 139 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D~i~~~~~ 139 (291)
.++.+|||+|||+|.++..+++. ++.|+++|+|+.+++.++++++.++++ ..+.++|+.+... .+.||+|+++.+
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~-~~~~~~D~~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLR-VDIRHGEALPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-CEEEESCHHHHHHTCCCCEEEEEECCC
T ss_pred cCCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCC-CcEEEccHHHHHHHhcCCCCEEEECCC
Confidence 46899999999999999999986 667999999999999999999999884 4677999987532 245999999876
Q ss_pred ccc---------cccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 140 FEH---------MKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 140 l~~---------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
... ..++..++..+.++|+|||.+++.+....
T Consensus 290 ~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 290 TLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp CCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 522 24567899999999999999997776543
No 210
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.50 E-value=2.6e-14 Score=119.62 Aligned_cols=108 Identities=16% Similarity=0.200 Sum_probs=85.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHH----CCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQK----YSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF 125 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~----~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 125 (291)
..+..++... ++.+|||||||+|..+..+++. .|+.+|+++|+|+.+++.++ ... ++++++++|+.+.
T Consensus 71 ~~l~~~l~~~---~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~-~~v~~~~gD~~~~ 142 (236)
T 2bm8_A 71 AVYHDMLWEL---RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDM-ENITLHQGDCSDL 142 (236)
T ss_dssp HHHHHHHHHH---CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGC-TTEEEEECCSSCS
T ss_pred HHHHHHHHhc---CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccC-CceEEEECcchhH
Confidence 3444444432 4579999999999999999987 57889999999999988776 112 4899999999884
Q ss_pred ---cc-C-CCccEEEEcccccccccHHHHHHHHHh-ccccCeeEEEEee
Q 022836 126 ---EM-E-ASYDRIYSIEMFEHMKNYQNLLKKISK-WMKEDTLLFVHHF 168 (291)
Q Consensus 126 ---~~-~-~~~D~i~~~~~l~~~~~~~~~l~~~~~-~LkpgG~l~~~~~ 168 (291)
+. . .+||+|++... | .+...++..+.+ .|||||++++.+.
T Consensus 143 ~~l~~~~~~~fD~I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 143 TTFEHLREMAHPLIFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp GGGGGGSSSCSSEEEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred HHHHhhccCCCCEEEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 32 2 37999998765 3 367889999997 9999999999654
No 211
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.50 E-value=1.5e-13 Score=121.40 Aligned_cols=117 Identities=11% Similarity=0.070 Sum_probs=95.3
Q ss_pred HHHHHHc-CCCCCCEEEEEcCCcchHHHHHHHHCCC-----CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc
Q 022836 53 ELYCERS-RLEDGHTVLDVGCGWGSLSLYIAQKYSN-----CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE 126 (291)
Q Consensus 53 ~~~~~~~-~~~~~~~vLDiGcG~G~~~~~la~~~~~-----~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 126 (291)
..++..+ ...++.+|||+|||+|.++..+++..+. .+++|+|+++.+++.|+.++...++ ++.++++|.....
T Consensus 119 ~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~ 197 (344)
T 2f8l_A 119 AYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANL 197 (344)
T ss_dssp HHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCC
T ss_pred HHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCcc
Confidence 4444433 3446789999999999999999887533 7899999999999999999988887 7899999988754
Q ss_pred cCCCccEEEEcccccccccH------------------HHHHHHHHhccccCeeEEEEeecc
Q 022836 127 MEASYDRIYSIEMFEHMKNY------------------QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 127 ~~~~~D~i~~~~~l~~~~~~------------------~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
...+||+|+++.++.+++.. ..+++.+.+.|+|||++++..+..
T Consensus 198 ~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 198 LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 44789999999997665321 258999999999999999988754
No 212
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.50 E-value=4.5e-14 Score=117.43 Aligned_cols=102 Identities=13% Similarity=0.141 Sum_probs=90.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccccc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 141 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~l~ 141 (291)
.+..+|||||||+|.++..++...|..+|+++|+++.+++.+++++..+|+ +..+...|....+++++||+|+++-+++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~-~~~~~v~D~~~~~p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV-PHRTNVADLLEDRLDEPADVTLLLKTLP 209 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC-CEEEEECCTTTSCCCSCCSEEEETTCHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeeecccCCCCCcchHHHHHHHH
Confidence 457799999999999999999877899999999999999999999999988 5899999999887779999999999999
Q ss_pred ccccHH--HHHHHHHhccccCeeEEE
Q 022836 142 HMKNYQ--NLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 142 ~~~~~~--~~l~~~~~~LkpgG~l~~ 165 (291)
++++.. ..+ ++.+.|+|+|+++-
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIVVT 234 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEEEE
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEEEe
Confidence 996543 355 89999999998754
No 213
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.50 E-value=8.5e-14 Score=126.73 Aligned_cols=113 Identities=12% Similarity=0.078 Sum_probs=93.7
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cCCCccE
Q 022836 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--MEASYDR 133 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~ 133 (291)
..+...++.+|||+|||+|..+..+++..++ .+|+++|+|+.+++.++++++..|+. +.++++|+.++. .+++||+
T Consensus 95 ~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~ 173 (464)
T 3m6w_A 95 VLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHR 173 (464)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEE
T ss_pred HhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCE
Confidence 3456778999999999999999999988643 79999999999999999999999997 999999998865 2478999
Q ss_pred EEEccccc------ccc----------------cHHHHHHHHHhccccCeeEEEEeecc
Q 022836 134 IYSIEMFE------HMK----------------NYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 134 i~~~~~l~------~~~----------------~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
|+++.+.. .-+ ....+++.+.++|||||+|+.++++.
T Consensus 174 Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 174 VLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 99755431 111 12679999999999999999987754
No 214
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.50 E-value=6.2e-14 Score=124.55 Aligned_cols=108 Identities=17% Similarity=0.213 Sum_probs=89.9
Q ss_pred HHHHHc--CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCc
Q 022836 54 LYCERS--RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASY 131 (291)
Q Consensus 54 ~~~~~~--~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 131 (291)
.+++.+ ...+..+|||||||+|.++..+++++|+.+++++|+ +.+++.+++ .++++++.+|+.+ +.+ .|
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~-~~ 252 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-SIP-SA 252 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-CCC-CC
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------CCCcEEEeCccCC-CCC-Cc
Confidence 344444 334678999999999999999999999999999999 787765543 2469999999987 444 59
Q ss_pred cEEEEcccccccccHH--HHHHHHHhcccc---CeeEEEEeecc
Q 022836 132 DRIYSIEMFEHMKNYQ--NLLKKISKWMKE---DTLLFVHHFCH 170 (291)
Q Consensus 132 D~i~~~~~l~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~ 170 (291)
|+|++..++|++++.. .+++++.++||| ||++++.++..
T Consensus 253 D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 253 DAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred eEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 9999999999998766 999999999999 99999977654
No 215
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.50 E-value=1.4e-13 Score=123.92 Aligned_cols=108 Identities=11% Similarity=0.118 Sum_probs=92.0
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-C-CeEEEEccccCCcc-----CCCccEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-Q-NVEIIVADISTFEM-----EASYDRI 134 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~-~v~~~~~d~~~~~~-----~~~~D~i 134 (291)
.++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.++++++.+++ + +++++.+|+.+... ..+||+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 467899999999999999999863 45999999999999999999999998 6 89999999988632 3689999
Q ss_pred EEccccc---------ccccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 135 YSIEMFE---------HMKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 135 ~~~~~l~---------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+++.+.. ...++..++..+.+.|+|||++++++...
T Consensus 298 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 9987542 22567889999999999999999877543
No 216
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.49 E-value=1.3e-13 Score=119.42 Aligned_cols=91 Identities=16% Similarity=0.272 Sum_probs=74.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCC
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEA 129 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 129 (291)
..++.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...+.++++++.+|+.+.+. .
T Consensus 29 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~-~ 105 (299)
T 2h1r_A 29 GILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF-P 105 (299)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC-C
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc-c
Confidence 45666777777788899999999999999999976 67999999999999999999887777789999999998765 4
Q ss_pred CccEEEEccccccc
Q 022836 130 SYDRIYSIEMFEHM 143 (291)
Q Consensus 130 ~~D~i~~~~~l~~~ 143 (291)
+||+|+++.+++..
T Consensus 106 ~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 106 KFDVCTANIPYKIS 119 (299)
T ss_dssp CCSEEEEECCGGGH
T ss_pred cCCEEEEcCCcccc
Confidence 89999998877644
No 217
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.49 E-value=1.7e-13 Score=125.81 Aligned_cols=113 Identities=14% Similarity=0.101 Sum_probs=93.3
Q ss_pred HcCCC--CCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc--CCCcc
Q 022836 58 RSRLE--DGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--EASYD 132 (291)
Q Consensus 58 ~~~~~--~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D 132 (291)
.+... ++.+|||+|||+|..+..+++..+ ..+|+++|+|+.+++.++++++..|++++.++++|+.+++. +++||
T Consensus 110 ~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD 189 (479)
T 2frx_A 110 ALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFD 189 (479)
T ss_dssp HHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEE
T ss_pred HhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCC
Confidence 34455 889999999999999999998863 47999999999999999999999998889999999988753 37899
Q ss_pred EEEEcccc------ccccc----------------HHHHHHHHHhccccCeeEEEEeecc
Q 022836 133 RIYSIEMF------EHMKN----------------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 133 ~i~~~~~l------~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+|+++.+. ...++ ...+++.+.++|||||+|++++++.
T Consensus 190 ~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 190 AILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp EEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 99985432 11111 3568999999999999999987754
No 218
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.49 E-value=1.7e-13 Score=122.26 Aligned_cols=113 Identities=19% Similarity=0.201 Sum_probs=90.5
Q ss_pred HHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-CC
Q 022836 53 ELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME-AS 130 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-~~ 130 (291)
..++... ..++.+|||+|||+|.+++.++...+..+|+|+|+|+.+++.|++++...|+ +++++.++|+.+++.+ ++
T Consensus 208 ~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~ 286 (373)
T 3tm4_A 208 NAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDS 286 (373)
T ss_dssp HHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSC
T ss_pred HHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCC
Confidence 3344444 6788999999999999999999885445999999999999999999999998 5899999999998766 78
Q ss_pred ccEEEEccccccc-------cc-HHHHHHHHHhccccCeeEEEEee
Q 022836 131 YDRIYSIEMFEHM-------KN-YQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 131 ~D~i~~~~~l~~~-------~~-~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
||+|+++.++... .+ +..+++.+.++| +|.+++.++
T Consensus 287 fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 287 VDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT 330 (373)
T ss_dssp EEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES
T ss_pred cCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC
Confidence 9999999876432 12 367888888888 555555444
No 219
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.49 E-value=8.2e-14 Score=126.66 Aligned_cols=114 Identities=16% Similarity=0.127 Sum_probs=94.4
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cCCCccE
Q 022836 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--MEASYDR 133 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~ 133 (291)
..+...++.+|||+|||+|..+..+++..+ ..+|+++|+|+.+++.++++++..|+.++.++++|+.++. .+++||+
T Consensus 99 ~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~ 178 (456)
T 3m4x_A 99 TAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDR 178 (456)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEE
T ss_pred HHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCE
Confidence 345678899999999999999999998753 4799999999999999999999999988999999998865 2378999
Q ss_pred EEEccccccc----------------------ccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 134 IYSIEMFEHM----------------------KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 134 i~~~~~l~~~----------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
|+++.+.... .....+++.+.++|||||+|+.++++.
T Consensus 179 Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 179 IVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 9997652111 112378999999999999999987754
No 220
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.49 E-value=1.1e-13 Score=121.55 Aligned_cols=108 Identities=16% Similarity=0.175 Sum_probs=87.1
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh--CC--CCeEEEEccccCCc--c-CCCcc
Q 022836 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--EL--QNVEIIVADISTFE--M-EASYD 132 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~--~~v~~~~~d~~~~~--~-~~~~D 132 (291)
...++.+|||||||+|..++.+++..+..+|+++|+|+.+++.|++++... ++ ++++++.+|+.+.. . .++||
T Consensus 117 ~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 117 SIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp TSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred hCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 345678999999999999999998766789999999999999999987652 33 47999999988752 1 26899
Q ss_pred EEEEcccc--ccccc--HHHHHHHHHhccccCeeEEEEe
Q 022836 133 RIYSIEMF--EHMKN--YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 133 ~i~~~~~l--~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
+|+++... +...+ ...+++.+.++|+|||++++..
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 99996542 11122 4789999999999999999864
No 221
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.48 E-value=1e-13 Score=124.84 Aligned_cols=109 Identities=17% Similarity=0.146 Sum_probs=92.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCcc-----CCCccEEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM-----EASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~-----~~~~D~i~ 135 (291)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++++.++++ +++++.+|+.+... ..+||+|+
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 47889999999999999999976 2459999999999999999999999986 89999999987532 36899999
Q ss_pred Ecccccc---------cccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 136 SIEMFEH---------MKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 136 ~~~~l~~---------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
++.+... ..+...++..+.+.|+|||.+++.+....
T Consensus 295 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp ECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 9875432 25577899999999999999988876543
No 222
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.48 E-value=9.1e-14 Score=119.49 Aligned_cols=110 Identities=20% Similarity=0.125 Sum_probs=88.1
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhC----CCCeEEEEccccCCcc--CCCccE
Q 022836 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE----LQNVEIIVADISTFEM--EASYDR 133 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~--~~~~D~ 133 (291)
...++.+|||||||+|..+..+++..+..+|+++|+++.+++.+++++...+ .++++++.+|+.+... .++||+
T Consensus 75 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 75 VSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred cCCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceE
Confidence 3456789999999999999999977667899999999999999999875432 2579999999987432 378999
Q ss_pred EEEccccccc--ccH--HHHHHHHHhccccCeeEEEEeec
Q 022836 134 IYSIEMFEHM--KNY--QNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 134 i~~~~~l~~~--~~~--~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
|++....... ... ..+++.+.++|+|||++++...+
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 9996543322 222 68999999999999999987543
No 223
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.48 E-value=1.4e-13 Score=119.40 Aligned_cols=110 Identities=15% Similarity=0.098 Sum_probs=86.1
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH--hCC--CCeEEEEccccCCc-c-CCCccE
Q 022836 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV--LEL--QNVEIIVADISTFE-M-EASYDR 133 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~--~~v~~~~~d~~~~~-~-~~~~D~ 133 (291)
...++.+|||||||+|..++.+++..+..+|+++|+++.+++.+++++.. .++ ++++++.+|+.+.. . .++||+
T Consensus 92 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~ 171 (304)
T 2o07_A 92 SHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV 171 (304)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred hCCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceE
Confidence 34567899999999999999999876668999999999999999998765 232 48999999987742 2 378999
Q ss_pred EEEcccccccc----cHHHHHHHHHhccccCeeEEEEeec
Q 022836 134 IYSIEMFEHMK----NYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 134 i~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
|++.......+ ....+++.+.++|+|||++++...+
T Consensus 172 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 172 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 99976543221 2356899999999999999997644
No 224
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.47 E-value=1.2e-12 Score=107.02 Aligned_cols=101 Identities=18% Similarity=0.185 Sum_probs=84.2
Q ss_pred cCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcc
Q 022836 59 SRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIE 138 (291)
Q Consensus 59 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~ 138 (291)
....++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.+++++...++ +++++++|+.+++ .+||+|+++.
T Consensus 45 ~~~~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~--~~~D~v~~~~ 120 (207)
T 1wy7_A 45 LGDIEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN--SRVDIVIMNP 120 (207)
T ss_dssp TTSSTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC--CCCSEEEECC
T ss_pred cCCCCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC--CCCCEEEEcC
Confidence 345578899999999999999999763 35899999999999999999988887 8999999999864 5899999999
Q ss_pred cccccc--cHHHHHHHHHhccccCeeEEE
Q 022836 139 MFEHMK--NYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 139 ~l~~~~--~~~~~l~~~~~~LkpgG~l~~ 165 (291)
+++... ....+++.+.+.+ |+.+++
T Consensus 121 p~~~~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 121 PFGSQRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp CCSSSSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred CCccccCCchHHHHHHHHHhc--CcEEEE
Confidence 987763 3457888888888 555444
No 225
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.47 E-value=1.1e-13 Score=120.79 Aligned_cols=108 Identities=11% Similarity=0.030 Sum_probs=88.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH--hC---CCCeEEEEccccCCc-c-CCCccEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV--LE---LQNVEIIVADISTFE-M-EASYDRI 134 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~---~~~v~~~~~d~~~~~-~-~~~~D~i 134 (291)
.++.+|||||||+|..+..+++..+..+|+++|+++.+++.+++++.. .+ .++++++.+|+.+.. . .++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 456899999999999999999876678999999999999999998764 22 358999999998742 2 3789999
Q ss_pred EEcccccc---c--cc--HHHHHHHHHhccccCeeEEEEeec
Q 022836 135 YSIEMFEH---M--KN--YQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 135 ~~~~~l~~---~--~~--~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
++....+. . .. ...+++.+.++|||||++++....
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99876644 1 11 378999999999999999987543
No 226
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.47 E-value=2.7e-13 Score=123.25 Aligned_cols=115 Identities=12% Similarity=0.111 Sum_probs=94.9
Q ss_pred HHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cC-CCc
Q 022836 55 YCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--ME-ASY 131 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~-~~~ 131 (291)
+...+...++.+|||+|||+|..+..+++..++.+|+++|+++.+++.+++++...++ ++.++.+|+.+.+ .+ ++|
T Consensus 238 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-~~~~~~~D~~~~~~~~~~~~f 316 (429)
T 1sqg_A 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQWCGEQQF 316 (429)
T ss_dssp HHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-CCEEEECCTTCTHHHHTTCCE
T ss_pred HHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-CeEEEeCchhhchhhcccCCC
Confidence 3344567889999999999999999999987668999999999999999999998888 6899999998875 33 689
Q ss_pred cEEEEcccc------ccccc----------------HHHHHHHHHhccccCeeEEEEeecc
Q 022836 132 DRIYSIEMF------EHMKN----------------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 132 D~i~~~~~l------~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
|+|+++.+. .+.++ ...+++.+.+.|||||++++++++.
T Consensus 317 D~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 999985432 22222 1578999999999999999988654
No 227
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.47 E-value=6.8e-14 Score=115.14 Aligned_cols=88 Identities=20% Similarity=0.229 Sum_probs=76.1
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEccc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEM 139 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~ 139 (291)
..++.+|||+|||+|.++..+ ..+|+|+|+|+. ++.++.+|+.+.+.+ ++||+|++..+
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l-----~~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~ 124 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSI-----RNPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLS 124 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHC-----CSCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESC
T ss_pred cCCCCeEEEECCcCCHHHHHh-----hccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehh
Confidence 356789999999999998876 358999999987 456889999987665 78999999999
Q ss_pred ccccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 140 FEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
+++ .+...+++++.++|+|||.+++.++.
T Consensus 125 l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 125 LMG-TNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp CCS-SCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred ccc-cCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 974 88999999999999999999997654
No 228
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.47 E-value=8.3e-14 Score=120.46 Aligned_cols=108 Identities=15% Similarity=0.045 Sum_probs=84.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH--hCC--CCeEEEEccccCCc-c-CCCccEEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV--LEL--QNVEIIVADISTFE-M-EASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~--~~v~~~~~d~~~~~-~-~~~~D~i~ 135 (291)
..+.+|||||||+|..+..+++..+..+|+++|+|+.+++.+++++.. .++ ++++++.+|+.+.. . .++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 456899999999999999999875678999999999999999998754 222 58999999987742 2 37899999
Q ss_pred Ecccccccc-----cHHHHHHHHHhccccCeeEEEEeec
Q 022836 136 SIEMFEHMK-----NYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 136 ~~~~l~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
++....+.. ....+++.+.++|||||++++...+
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 865432121 2368999999999999999997543
No 229
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.47 E-value=3.7e-13 Score=109.54 Aligned_cols=90 Identities=21% Similarity=0.235 Sum_probs=72.9
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccc
Q 022836 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEM 139 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~ 139 (291)
...++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.+++++. +++++++|+.+++ ++||+|+++.+
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~--~~~D~v~~~~p 119 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS--GKYDTWIMNPP 119 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC--CCEEEEEECCC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC--CCeeEEEECCC
Confidence 4557889999999999999999976 34589999999999999988754 6899999999865 78999999999
Q ss_pred cccccc--HHHHHHHHHhcc
Q 022836 140 FEHMKN--YQNLLKKISKWM 157 (291)
Q Consensus 140 l~~~~~--~~~~l~~~~~~L 157 (291)
+++..+ ...+++.+.+.+
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 120 FGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp C-------CHHHHHHHHHHE
T ss_pred chhccCchhHHHHHHHHHhc
Confidence 988853 346888888887
No 230
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.47 E-value=2.4e-13 Score=110.02 Aligned_cols=107 Identities=20% Similarity=0.293 Sum_probs=82.2
Q ss_pred HHHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc--
Q 022836 51 MLELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-- 127 (291)
Q Consensus 51 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-- 127 (291)
++.++.++.. ..++.+|||+|||+|.++..++++ +.+|+|+|+++.. ..+++.++++|+.+...
T Consensus 12 KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~ 78 (191)
T 3dou_A 12 KLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFD 78 (191)
T ss_dssp HHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHH
T ss_pred HHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHH
Confidence 4555655554 467899999999999999999987 7899999999852 23579999999988541
Q ss_pred ------C----CCccEEEEccccccc-----------ccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 128 ------E----ASYDRIYSIEMFEHM-----------KNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 128 ------~----~~~D~i~~~~~l~~~-----------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
. ++||+|+|+...... .....+++.+.++|||||.+++..+..
T Consensus 79 ~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 79 DIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp HHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 1 389999997643221 123567888999999999999877644
No 231
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.47 E-value=1.1e-13 Score=118.54 Aligned_cols=107 Identities=22% Similarity=0.133 Sum_probs=86.1
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh--CC--CCeEEEEccccCCc-c-CCCccEEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--EL--QNVEIIVADISTFE-M-EASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~--~~v~~~~~d~~~~~-~-~~~~D~i~ 135 (291)
..+.+|||||||+|..++.+++..+..+|++||+++.+++.+++++... ++ ++++++.+|+.+.. . .++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 4578999999999999999997655689999999999999999987542 23 58999999988742 2 37899999
Q ss_pred Ecccccccc----cHHHHHHHHHhccccCeeEEEEee
Q 022836 136 SIEMFEHMK----NYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 136 ~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
+.......+ ....+++.+.++|+|||++++...
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 976543221 136799999999999999998754
No 232
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.46 E-value=4.6e-13 Score=108.39 Aligned_cols=99 Identities=19% Similarity=0.180 Sum_probs=77.6
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCC---------CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEE-EccccCCc----
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSN---------CKITGICNSKTQKEFIEEQCRVLELQNVEII-VADISTFE---- 126 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~---------~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~-~~d~~~~~---- 126 (291)
..++.+|||+|||+|.++..+++..+. .+|+|+|+|+.. ..+++.++ .+|+....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHH
Confidence 467899999999999999999998644 799999999842 23478899 89987643
Q ss_pred ----cC-CCccEEEEccccccc----ccH-------HHHHHHHHhccccCeeEEEEeecc
Q 022836 127 ----ME-ASYDRIYSIEMFEHM----KNY-------QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 127 ----~~-~~~D~i~~~~~l~~~----~~~-------~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
.+ ++||+|+++.+++.. .+. ..+++.+.++|||||.+++.++..
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 12 589999997655432 222 478999999999999999976643
No 233
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.45 E-value=1.2e-12 Score=119.08 Aligned_cols=115 Identities=18% Similarity=0.277 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc
Q 022836 47 AEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE 126 (291)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 126 (291)
....+++.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++.++++++.++.+|+.+..
T Consensus 270 ~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l 347 (433)
T 1uwv_A 270 VNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDV 347 (433)
T ss_dssp HHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCC
T ss_pred HHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHh
Confidence 44566777777777778889999999999999999987 7899999999999999999999999888999999998832
Q ss_pred ----cC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 127 ----ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 127 ----~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
.. ++||+|+++.+..... .+++.+.+ ++|+++++++.
T Consensus 348 ~~~~~~~~~fD~Vv~dPPr~g~~---~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 348 TKQPWAKNGFDKVLLDPARAGAA---GVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp SSSGGGTTCCSEEEECCCTTCCH---HHHHHHHH-HCCSEEEEEES
T ss_pred hhhhhhcCCCCEEEECCCCccHH---HHHHHHHh-cCCCeEEEEEC
Confidence 22 6899999988775443 45555554 78999888753
No 234
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.45 E-value=1.8e-13 Score=131.25 Aligned_cols=106 Identities=17% Similarity=0.170 Sum_probs=90.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC--CeEEEEccccCCc-c-CCCccEEEEcc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVADISTFE-M-EASYDRIYSIE 138 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~-~-~~~~D~i~~~~ 138 (291)
++.+|||+|||+|.++..++... ..+|++||+|+.+++.++++++.++++ +++++++|+.++. . .++||+|+++.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 58899999999999999998752 347999999999999999999999985 7999999998843 2 27899999987
Q ss_pred cc-----------cccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 139 MF-----------EHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 139 ~l-----------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
+. ....++..++..+.++|+|||+|++++..
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 53 33356788999999999999999987654
No 235
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.45 E-value=9.8e-14 Score=121.30 Aligned_cols=108 Identities=20% Similarity=0.155 Sum_probs=86.3
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH--hCC--CCeEEEEccccCCc--cCCCccEEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV--LEL--QNVEIIVADISTFE--MEASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~--~~v~~~~~d~~~~~--~~~~~D~i~ 135 (291)
.++.+|||||||+|..+..+++..+..+|+++|+|+.+++.+++++.. .++ ++++++.+|+.+.. .+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 456899999999999999999766678999999999999999998765 222 47999999987742 237899999
Q ss_pred Ecccccc--cccH--HHHHHHHHhccccCeeEEEEeec
Q 022836 136 SIEMFEH--MKNY--QNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 136 ~~~~l~~--~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
++..-.. .... ..+++.+.+.|+|||++++...+
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9753211 1121 78999999999999999997643
No 236
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.45 E-value=2.6e-13 Score=124.00 Aligned_cols=121 Identities=17% Similarity=0.135 Sum_probs=98.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-------------CCCEEEEEcCCHHHHHHHHHHHHHhCCC--C
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-------------SNCKITGICNSKTQKEFIEEQCRVLELQ--N 114 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~ 114 (291)
...+.+++.+...++.+|||+|||+|.++..+++.. +..+++|+|+++.+++.|+.++...|+. +
T Consensus 158 ~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~ 237 (445)
T 2okc_A 158 PLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDR 237 (445)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSC
T ss_pred HHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCC
Confidence 344555666666778899999999999999888652 2468999999999999999999888874 6
Q ss_pred eEEEEccccCCccCCCccEEEEccccccccc-----------------HHHHHHHHHhccccCeeEEEEeecc
Q 022836 115 VEIIVADISTFEMEASYDRIYSIEMFEHMKN-----------------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 115 v~~~~~d~~~~~~~~~~D~i~~~~~l~~~~~-----------------~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+.+.++|....+...+||+|+++.++..... ...+++.+.+.|||||++.+..+..
T Consensus 238 ~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 238 SPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp CSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 8899999988765578999999998876421 1368999999999999999888753
No 237
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.45 E-value=1.5e-12 Score=117.79 Aligned_cols=109 Identities=17% Similarity=0.342 Sum_probs=88.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 128 (291)
..++..+++ ..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++.++++ +.++.+|+.++..
T Consensus 279 e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~- 351 (425)
T 2jjq_A 279 VNLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV- 351 (425)
T ss_dssp HHHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC-
T ss_pred HHHHHHhhc---cCCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc-
Confidence 344455544 456789999999999999999976 679999999999999999999999886 9999999998754
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
.+||+|+++.+..... ..+++.+. .|+|+|+++++.
T Consensus 352 ~~fD~Vv~dPPr~g~~--~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 352 KGFDTVIVDPPRAGLH--PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp TTCSEEEECCCTTCSC--HHHHHHHH-HHCCSEEEEEES
T ss_pred cCCCEEEEcCCccchH--HHHHHHHH-hcCCCcEEEEEC
Confidence 3899999987754332 34555554 489999998864
No 238
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.44 E-value=2.2e-13 Score=116.99 Aligned_cols=106 Identities=10% Similarity=0.057 Sum_probs=84.8
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh-----------CCCCeEEEEccccCCcc-CC
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-----------ELQNVEIIVADISTFEM-EA 129 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----------~~~~v~~~~~d~~~~~~-~~ 129 (291)
.++.+|||||||+|..+..+++. +..+|++||+++.+++.+++++ .. ..++++++.+|+.+... .+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~ 151 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNR 151 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccC
Confidence 45689999999999999999987 6789999999999999999987 32 22579999999876422 47
Q ss_pred CccEEEEccccccc--cc--HHHHHHHHHhccccCeeEEEEeec
Q 022836 130 SYDRIYSIEMFEHM--KN--YQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 130 ~~D~i~~~~~l~~~--~~--~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
+||+|++....+.. .. ...+++.+.++|+|||++++....
T Consensus 152 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 152 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 89999997654221 11 267899999999999999997543
No 239
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.44 E-value=8.9e-13 Score=117.95 Aligned_cols=121 Identities=16% Similarity=0.218 Sum_probs=97.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCC--------------------------------------CEEE
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN--------------------------------------CKIT 91 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~--------------------------------------~~v~ 91 (291)
.+...++...+..++.+|||++||+|.+++.++....+ .+|+
T Consensus 182 ~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 261 (385)
T 3ldu_A 182 TLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIY 261 (385)
T ss_dssp HHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEE
T ss_pred HHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEE
Confidence 34556667777888999999999999999999876311 5799
Q ss_pred EEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCccEEEEccccccc----ccHHHHHHHHHhcccc--CeeEE
Q 022836 92 GICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEMFEHM----KNYQNLLKKISKWMKE--DTLLF 164 (291)
Q Consensus 92 ~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~~~~l~~~----~~~~~~l~~~~~~Lkp--gG~l~ 164 (291)
|+|+++.+++.|++++..++++ ++++.++|+.+++.+.+||+|+++.++..- .+...+.+.+.+.||+ |+.++
T Consensus 262 GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 341 (385)
T 3ldu_A 262 GYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYY 341 (385)
T ss_dssp EEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEE
Confidence 9999999999999999999984 799999999998766889999999987532 3455667777777766 88888
Q ss_pred EEeecc
Q 022836 165 VHHFCH 170 (291)
Q Consensus 165 ~~~~~~ 170 (291)
+.+...
T Consensus 342 iit~~~ 347 (385)
T 3ldu_A 342 LITSYE 347 (385)
T ss_dssp EEESCT
T ss_pred EEECCH
Confidence 766543
No 240
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.44 E-value=1.2e-12 Score=117.33 Aligned_cols=122 Identities=14% Similarity=0.148 Sum_probs=97.2
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCC--------------------------------------CEE
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN--------------------------------------CKI 90 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~--------------------------------------~~v 90 (291)
+.+...++...+..++.+|||++||+|.+++.++....+ .+|
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 345566777778888999999999999999998875322 469
Q ss_pred EEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCccEEEEccccccc----ccHHHHHHHHHhcccc--CeeE
Q 022836 91 TGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEMFEHM----KNYQNLLKKISKWMKE--DTLL 163 (291)
Q Consensus 91 ~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~~~~l~~~----~~~~~~l~~~~~~Lkp--gG~l 163 (291)
+|+|+|+.+++.|++++...|++ +++++++|+.+++.+.+||+|+++.++..- .+...+.+.+.+.||+ ||.+
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~ 346 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSV 346 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEE
Confidence 99999999999999999999985 599999999998766889999999887432 2345566666666665 8888
Q ss_pred EEEeecc
Q 022836 164 FVHHFCH 170 (291)
Q Consensus 164 ~~~~~~~ 170 (291)
++.+...
T Consensus 347 ~iit~~~ 353 (393)
T 3k0b_A 347 YVLTSYE 353 (393)
T ss_dssp EEEECCT
T ss_pred EEEECCH
Confidence 8876543
No 241
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.44 E-value=9.4e-14 Score=120.88 Aligned_cols=106 Identities=17% Similarity=0.125 Sum_probs=82.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh--CC--CCeEEEEccccCCc--cCCCccEEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--EL--QNVEIIVADISTFE--MEASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~--~~v~~~~~d~~~~~--~~~~~D~i~ 135 (291)
.++.+|||||||+|..++.+++..+..+|+++|+|+.+++.|++++... ++ ++++++.+|+.+.. ..++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 4568999999999999999998766789999999999999999987543 22 47999999998742 237899999
Q ss_pred Ecccccccc--cH--HHHHHHHHhccccCeeEEEEe
Q 022836 136 SIEMFEHMK--NY--QNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 136 ~~~~l~~~~--~~--~~~l~~~~~~LkpgG~l~~~~ 167 (291)
++...+..+ .. ..+++.+.++|+|||++++..
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 976432111 11 688999999999999999875
No 242
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.44 E-value=3.9e-13 Score=118.31 Aligned_cols=101 Identities=15% Similarity=0.186 Sum_probs=87.9
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccCCCccEEEEcccc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEMEASYDRIYSIEMF 140 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~D~i~~~~~l 140 (291)
.++.+|||+|||+|.++.. ++ .+.+|+++|+|+.+++.++++++.+++ +++.++++|+.+.. .+||+|+++.+.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNRVIMNLPK 268 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEEEEECCTT
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcEEEECCcH
Confidence 4688999999999999999 76 378999999999999999999999998 57999999999876 789999997654
Q ss_pred cccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 141 EHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
.. ..+++.+.+.|+|||.+++.++...
T Consensus 269 ~~----~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 269 FA----HKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp TG----GGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred hH----HHHHHHHHHHcCCCCEEEEEEeecC
Confidence 32 3788889999999999999877554
No 243
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.43 E-value=5.4e-14 Score=120.19 Aligned_cols=113 Identities=25% Similarity=0.289 Sum_probs=81.7
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHH-HhCC-CCeEEE--EccccCCc
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCR-VLEL-QNVEII--VADISTFE 126 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~-~~v~~~--~~d~~~~~ 126 (291)
++..+.+.....++.+|||+|||+|.++..++++ .+|+|||+++ ++..++++.. .... .++.++ ++|+.+++
T Consensus 70 KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 145 (276)
T 2wa2_A 70 KLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME 145 (276)
T ss_dssp HHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC
T ss_pred HHHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC
Confidence 4556666655578899999999999999999976 5899999998 5322211100 0001 168899 99999876
Q ss_pred cCCCccEEEEccccccccc----HH---HHHHHHHhccccCe--eEEEEeec
Q 022836 127 MEASYDRIYSIEMFEHMKN----YQ---NLLKKISKWMKEDT--LLFVHHFC 169 (291)
Q Consensus 127 ~~~~~D~i~~~~~l~~~~~----~~---~~l~~~~~~LkpgG--~l~~~~~~ 169 (291)
+++||+|+|..+ ++..+ .. .+++.+.++||||| .+++.++.
T Consensus 146 -~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 -PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred -CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 578999999877 43322 11 37899999999999 99887765
No 244
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.43 E-value=6e-13 Score=109.67 Aligned_cols=100 Identities=15% Similarity=0.198 Sum_probs=85.4
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccccc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 141 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~l~ 141 (291)
.++.+|||||||+|.++..+. ++.+|+|+|+|+.+++.+++++...+. +..+..+|....++++++|+|++.-+++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~-~~~~~v~D~~~~~~~~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDW-DFTFALQDVLCAPPAEAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTC-EEEEEECCTTTSCCCCBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeecccCCCCCCcchHHHHHHHH
Confidence 567899999999999999877 589999999999999999999888875 7899999999988778999999999998
Q ss_pred ccccHH-HHHHHHHhccccCeeEEE
Q 022836 142 HMKNYQ-NLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 142 ~~~~~~-~~l~~~~~~LkpgG~l~~ 165 (291)
++++.. ...-++.+.|+++|+++-
T Consensus 180 ~LE~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 180 LLEREQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp HHHHHSTTHHHHHHHHCBCSEEEEE
T ss_pred HhhhhchhhHHHHHHHhcCCCEEEE
Confidence 885432 233388889999987544
No 245
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.43 E-value=1.5e-13 Score=117.65 Aligned_cols=107 Identities=13% Similarity=0.076 Sum_probs=80.3
Q ss_pred HHHHHHHHcCCC-CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeE-EEEccccCCcc-
Q 022836 51 MLELYCERSRLE-DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVE-IIVADISTFEM- 127 (291)
Q Consensus 51 ~~~~~~~~~~~~-~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~-~~~~d~~~~~~- 127 (291)
++..+++.+... ++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.+.++ . +++. +...|+..+..
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~----~-~rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQ----D-DRVRSMEQYNFRYAEPV 145 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHT----C-TTEEEECSCCGGGCCGG
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh----C-cccceecccCceecchh
Confidence 466667776654 6789999999999999999876 246999999999999875432 1 2333 22345544332
Q ss_pred --C-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 128 --E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 --~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+ .+||+|++..+++++ ..++..+.++|||||.+++.
T Consensus 146 ~l~~~~fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 146 DFTEGLPSFASIDVSFISL---NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GCTTCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEE
T ss_pred hCCCCCCCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEE
Confidence 2 349999998888755 77899999999999999885
No 246
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.43 E-value=1.9e-12 Score=115.49 Aligned_cols=121 Identities=16% Similarity=0.130 Sum_probs=98.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCC--------------------------------------CEEE
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN--------------------------------------CKIT 91 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~--------------------------------------~~v~ 91 (291)
.+...++...+..++..|||.+||+|.+++.++....+ .+|+
T Consensus 181 ~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~ 260 (384)
T 3ldg_A 181 NMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDIS 260 (384)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEE
Confidence 34556677778888999999999999999998865322 4699
Q ss_pred EEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccCCCccEEEEccccccc----ccHHHHHHHHHhcccc--CeeEE
Q 022836 92 GICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEMEASYDRIYSIEMFEHM----KNYQNLLKKISKWMKE--DTLLF 164 (291)
Q Consensus 92 ~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~~~~l~~~----~~~~~~l~~~~~~Lkp--gG~l~ 164 (291)
|+|+|+.+++.|++|+...|+. ++++.++|+.+++.+.+||+|+++.++..- .+...+.+.+.+.||+ ||.++
T Consensus 261 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 340 (384)
T 3ldg_A 261 GFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQF 340 (384)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 9999999999999999999985 599999999998766789999999987532 3456677777777766 89888
Q ss_pred EEeecc
Q 022836 165 VHHFCH 170 (291)
Q Consensus 165 ~~~~~~ 170 (291)
+.+...
T Consensus 341 iit~~~ 346 (384)
T 3ldg_A 341 ILTNDT 346 (384)
T ss_dssp EEESCT
T ss_pred EEECCH
Confidence 876643
No 247
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.42 E-value=6.5e-14 Score=119.07 Aligned_cols=109 Identities=24% Similarity=0.316 Sum_probs=81.5
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC------CeEEE--Eccc
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ------NVEII--VADI 122 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~------~v~~~--~~d~ 122 (291)
++..+.++....++.+|||||||+|.++..+++. .+|+|||+++ ++..+++ .... ++.++ ++|+
T Consensus 62 KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~----~~~~~~~~~~~v~~~~~~~D~ 133 (265)
T 2oxt_A 62 KLAWMEERGYVELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHE----VPRITESYGWNIVKFKSRVDI 133 (265)
T ss_dssp HHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCC----CCCCCCBTTGGGEEEECSCCT
T ss_pred HHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhh----hhhhhhccCCCeEEEecccCH
Confidence 3555666655678899999999999999999875 5899999998 4322211 1111 68899 9999
Q ss_pred cCCccCCCccEEEEcccccccccH----H---HHHHHHHhccccCe--eEEEEeec
Q 022836 123 STFEMEASYDRIYSIEMFEHMKNY----Q---NLLKKISKWMKEDT--LLFVHHFC 169 (291)
Q Consensus 123 ~~~~~~~~~D~i~~~~~l~~~~~~----~---~~l~~~~~~LkpgG--~l~~~~~~ 169 (291)
.+++ +++||+|+|..+ ++..+. . .+++.+.++||||| .+++..+.
T Consensus 134 ~~l~-~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 134 HTLP-VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp TTSC-CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred hHCC-CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 9876 578999999876 443221 1 37899999999999 99987765
No 248
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.41 E-value=5.3e-13 Score=113.28 Aligned_cols=99 Identities=12% Similarity=0.011 Sum_probs=82.1
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH----hCCCCeEEEEccccCCccCCCccEEEE
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV----LELQNVEIIVADISTFEMEASYDRIYS 136 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~v~~~~~d~~~~~~~~~~D~i~~ 136 (291)
...+.+|||||||+|..+..+++. + .+|+++|+++.+++.|++++.. ...++++++.+|..+.. ++||+|++
T Consensus 70 ~~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~ 145 (262)
T 2cmg_A 70 KKELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFC 145 (262)
T ss_dssp SSCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEE
Confidence 345689999999999999999977 6 8999999999999999876532 11247999999998875 78999999
Q ss_pred cccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 137 IEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 137 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
.. .++..+++.+.+.|+|||++++...
T Consensus 146 d~-----~dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 146 LQ-----EPDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp SS-----CCCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CC-----CChHHHHHHHHHhcCCCcEEEEEcC
Confidence 73 3445689999999999999998654
No 249
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.39 E-value=3e-14 Score=120.00 Aligned_cols=114 Identities=18% Similarity=0.202 Sum_probs=87.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~- 128 (291)
..++.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++. ..++++++++|+.+++.+
T Consensus 16 ~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~--~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~~ 91 (245)
T 1yub_A 16 KVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI--SKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFPN 91 (245)
T ss_dssp TTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH--SSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCCC
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh--CCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCccc
Confidence 34566777788888999999999999999999988 5899999999999988877654 234799999999997654
Q ss_pred -CCccEEEEcccccccc-----------cHHHHH----HHHHhccccCeeEEEEee
Q 022836 129 -ASYDRIYSIEMFEHMK-----------NYQNLL----KKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 129 -~~~D~i~~~~~l~~~~-----------~~~~~l----~~~~~~LkpgG~l~~~~~ 168 (291)
++| .|+++.++.... ....++ +.+.++|+|||.+.+...
T Consensus 92 ~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 92 KQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp SSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred CCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 568 778876543321 112233 668899999999877543
No 250
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.39 E-value=1.6e-13 Score=109.40 Aligned_cols=91 Identities=15% Similarity=0.107 Sum_probs=78.5
Q ss_pred HcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---C-CCccE
Q 022836 58 RSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---E-ASYDR 133 (291)
Q Consensus 58 ~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---~-~~~D~ 133 (291)
.++..++.+|||+|||. +++|+|+.|++.++++... ++.++++|+.+++. + ++||+
T Consensus 7 ~~g~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp TTTCCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred ccCCCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhccc----CcEEEEechhcCccccCCCCCEeE
Confidence 34678899999999995 2399999999999876532 58999999998876 4 78999
Q ss_pred EEEccccccc-ccHHHHHHHHHhccccCeeEEEEee
Q 022836 134 IYSIEMFEHM-KNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 134 i~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
|++..+++|+ ++...+++++.++|||||++++..+
T Consensus 67 V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 67 ILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp EEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 9999999999 8999999999999999999999544
No 251
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.38 E-value=1.2e-12 Score=118.58 Aligned_cols=113 Identities=16% Similarity=0.240 Sum_probs=90.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM 127 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 127 (291)
....+.+++.+...++.+|||+|||+|.++..++++. +..+++|+|+++.+++.| .++.++++|+.+...
T Consensus 25 ~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~~~~ 95 (421)
T 2ih2_A 25 PEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFLLWEP 95 (421)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGGGCCC
T ss_pred HHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChhhcCc
Confidence 3445566666665567799999999999999999875 568999999999987665 378999999998765
Q ss_pred CCCccEEEEccccccccc-----------------------------HHHHHHHHHhccccCeeEEEEeecc
Q 022836 128 EASYDRIYSIEMFEHMKN-----------------------------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~~~-----------------------------~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
.++||+|+++.++..... ...+++.+.++|+|||.+++..+..
T Consensus 96 ~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 96 GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 578999999877643311 1256889999999999999988764
No 252
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.38 E-value=1.8e-13 Score=118.70 Aligned_cols=113 Identities=18% Similarity=0.264 Sum_probs=80.2
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcC----CHHHHHHHHHHHHHhCCCCeEEEEc-cccCCc
Q 022836 52 LELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICN----SKTQKEFIEEQCRVLELQNVEIIVA-DISTFE 126 (291)
Q Consensus 52 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~----s~~~~~~a~~~~~~~~~~~v~~~~~-d~~~~~ 126 (291)
+..+.++....++.+|||+|||+|.++..++++ .+|+|+|+ ++.+++.+. ....+.+++.++++ |+..++
T Consensus 71 L~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~D~~~l~ 145 (305)
T 2p41_A 71 LRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIP--MSTYGWNLVRLQSGVDVFFIP 145 (305)
T ss_dssp HHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCC--CCSTTGGGEEEECSCCTTTSC
T ss_pred HHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHH--hhhcCCCCeEEEeccccccCC
Confidence 444555534567899999999999999999976 47999999 554432111 11112246899999 888764
Q ss_pred cCCCccEEEEccccc---ccccHH---HHHHHHHhccccCeeEEEEeecc
Q 022836 127 MEASYDRIYSIEMFE---HMKNYQ---NLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 127 ~~~~~D~i~~~~~l~---~~~~~~---~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
.++||+|+|..++. +..+.. .++..+.++|||||.+++..+..
T Consensus 146 -~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 -PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp -CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred -cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 36899999987653 222222 47888999999999999876654
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.37 E-value=9.5e-12 Score=107.02 Aligned_cols=90 Identities=20% Similarity=0.318 Sum_probs=78.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 128 (291)
...++.+++.+...++.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++.. .++++++++|+.+++.+
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~--~~~v~vi~gD~l~~~~~ 111 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKEL--YNNIEIIWGDALKVDLN 111 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHH--CSSEEEEESCTTTSCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhcc--CCCeEEEECchhhCCcc
Confidence 456677888888889999999999999999999988 78999999999999999998873 35899999999997766
Q ss_pred -CCccEEEEcccccc
Q 022836 129 -ASYDRIYSIEMFEH 142 (291)
Q Consensus 129 -~~~D~i~~~~~l~~ 142 (291)
.+||+|+++.+++.
T Consensus 112 ~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 112 KLDFNKVVANLPYQI 126 (295)
T ss_dssp GSCCSEEEEECCGGG
T ss_pred cCCccEEEEeCcccc
Confidence 67999999977653
No 254
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.36 E-value=1.9e-12 Score=115.45 Aligned_cols=115 Identities=16% Similarity=0.157 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc
Q 022836 48 EKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM 127 (291)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 127 (291)
...++..+++.+... +.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++++.+++++++++.+|+.+...
T Consensus 199 ~~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~ 275 (369)
T 3bt7_A 199 NIQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQ 275 (369)
T ss_dssp HHHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHH
T ss_pred HHHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHH
Confidence 355667777766544 578999999999999999875 67999999999999999999999998889999999987531
Q ss_pred --C---------------CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 128 --E---------------ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 128 --~---------------~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
. .+||+|+++.+...+ ...+.+.|+++|.++..+.++.
T Consensus 276 ~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~------~~~~~~~l~~~g~ivyvsc~p~ 330 (369)
T 3bt7_A 276 AMNGVREFNRLQGIDLKSYQCETIFVDPPRSGL------DSETEKMVQAYPRILYISCNPE 330 (369)
T ss_dssp HHSSCCCCTTGGGSCGGGCCEEEEEECCCTTCC------CHHHHHHHTTSSEEEEEESCHH
T ss_pred HHhhccccccccccccccCCCCEEEECcCcccc------HHHHHHHHhCCCEEEEEECCHH
Confidence 1 279999998765422 3345556678888877776543
No 255
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.35 E-value=6e-12 Score=107.85 Aligned_cols=97 Identities=13% Similarity=0.074 Sum_probs=75.1
Q ss_pred cCCCCCCEEEEEcC------CcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEE-EEccccCCccCCC
Q 022836 59 SRLEDGHTVLDVGC------GWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEI-IVADISTFEMEAS 130 (291)
Q Consensus 59 ~~~~~~~~vLDiGc------G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~-~~~d~~~~~~~~~ 130 (291)
+...++.+|||+|| |+|. ..+++..+ +.+|+|+|+|+. ++++++ +++|+.+.+..++
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~~~~~ 123 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVHTANK 123 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCCCSSC
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCCccCc
Confidence 45678999999999 4476 55566665 589999999997 136788 9999998766678
Q ss_pred ccEEEEcccccc-----------cccHHHHHHHHHhccccCeeEEEEeecc
Q 022836 131 YDRIYSIEMFEH-----------MKNYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 131 ~D~i~~~~~l~~-----------~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
||+|+|+...+. ......+++.+.++|||||.+++..+..
T Consensus 124 fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 124 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp EEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred ccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 999999754221 1224579999999999999999976543
No 256
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.35 E-value=3.5e-13 Score=112.35 Aligned_cols=108 Identities=15% Similarity=0.107 Sum_probs=74.3
Q ss_pred HHHHHHHHcCCC-CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEE-EccccCCc--
Q 022836 51 MLELYCERSRLE-DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEII-VADISTFE-- 126 (291)
Q Consensus 51 ~~~~~~~~~~~~-~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~-~~d~~~~~-- 126 (291)
++..+++.+... ++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.++++.. ++... ..++....
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~-----~~~~~~~~~~~~~~~~ 97 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDE-----RVVVMEQFNFRNAVLA 97 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCT-----TEEEECSCCGGGCCGG
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCc-----cccccccceEEEeCHh
Confidence 455666666554 56799999999999999999872 3599999999999988765422 22211 11222111
Q ss_pred -cC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 127 -ME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 127 -~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
.+ ..+|.+.+..++..+ ..+++++.++|||||.+++..
T Consensus 98 ~~~~~~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 98 DFEQGRPSFTSIDVSFISL---DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp GCCSCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE
T ss_pred HcCcCCCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEEE
Confidence 11 135666666665544 678999999999999998843
No 257
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.33 E-value=2.3e-11 Score=105.49 Aligned_cols=113 Identities=12% Similarity=-0.037 Sum_probs=89.1
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC----CCc
Q 022836 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----ASY 131 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~----~~~ 131 (291)
..+...++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.++++++..|++++.++.+|+.++... .+|
T Consensus 96 ~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~f 175 (309)
T 2b9e_A 96 MLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEV 175 (309)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTE
T ss_pred HHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCC
Confidence 34567889999999999999999999864 4579999999999999999999999988899999999886532 479
Q ss_pred cEEEEccccccc-----------------cc-------HHHHHHHHHhccccCeeEEEEeecc
Q 022836 132 DRIYSIEMFEHM-----------------KN-------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 132 D~i~~~~~l~~~-----------------~~-------~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
|.|++..+.... .+ ..++++.+.++|+ ||+|+.++.+.
T Consensus 176 D~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 176 HYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp EEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred CEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 999985432110 01 1346777888887 99988877654
No 258
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.31 E-value=8.1e-12 Score=111.29 Aligned_cols=101 Identities=15% Similarity=0.048 Sum_probs=85.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh---------------CCCCeEEEEccccCCcc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL---------------ELQNVEIIVADISTFEM 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~---------------~~~~v~~~~~d~~~~~~ 127 (291)
++.+|||+|||+|..++.++++.++.+|+++|+++.+++.+++|++.+ +++++.++++|+.++..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 578999999999999999999876779999999999999999999998 77569999999987642
Q ss_pred --CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 128 --EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 128 --~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
.++||+|++.. .. ....+++.+.+.|||||.+++..
T Consensus 127 ~~~~~fD~I~lDP-~~---~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP-FG---SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC-SS---CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC-CC---CHHHHHHHHHHhcCCCCEEEEEe
Confidence 25799999764 22 23678899999999999887754
No 259
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.31 E-value=5.7e-12 Score=112.42 Aligned_cols=102 Identities=16% Similarity=0.077 Sum_probs=86.4
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHHHhCCCC--eEEEEccccCCcc---CCCccEEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQN--VEIIVADISTFEM---EASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~--v~~~~~d~~~~~~---~~~~D~i~ 135 (291)
.++.+|||++||+|.+++.++++.++ .+|+++|+++.+++.+++|++.+++++ +.++.+|+.++.. .++||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 46789999999999999999987545 689999999999999999999999854 9999999977543 36799999
Q ss_pred EcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 136 SIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 136 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
++. . .....+++.+.+.|+|||+++++.
T Consensus 131 lDP-~---g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP-F---GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC-S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC-C---cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 987 2 223568889999999999887765
No 260
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.29 E-value=1.8e-11 Score=102.86 Aligned_cols=88 Identities=20% Similarity=0.337 Sum_probs=72.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 128 (291)
...++.+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++.. .++++++++|+.+++.+
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR--CNFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQFKFP 91 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGCCCC
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc--CCeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhCCcc
Confidence 456677788788888999999999999999999988 58999999999999999887653 24899999999997655
Q ss_pred --CCccEEEEccccc
Q 022836 129 --ASYDRIYSIEMFE 141 (291)
Q Consensus 129 --~~~D~i~~~~~l~ 141 (291)
..| .|+++.+++
T Consensus 92 ~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 92 KNQSY-KIFGNIPYN 105 (244)
T ss_dssp SSCCC-EEEEECCGG
T ss_pred cCCCe-EEEEeCCcc
Confidence 344 577776654
No 261
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.26 E-value=3.1e-11 Score=102.62 Aligned_cols=89 Identities=20% Similarity=0.251 Sum_probs=75.9
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 128 (291)
...++.+++.++..++ +|||||||+|.++..+++. +.+|+++|+|+.+++.+++++.. .+++++++|+.+++.+
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~--~~~V~avEid~~~~~~l~~~~~~---~~v~vi~~D~l~~~~~ 106 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA--GAEVTAIEKDLRLRPVLEETLSG---LPVRLVFQDALLYPWE 106 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTTT---SSEEEEESCGGGSCGG
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcCC---CCEEEEECChhhCChh
Confidence 4566778888888888 9999999999999999987 67999999999999999887652 4899999999998765
Q ss_pred --CCccEEEEccccccc
Q 022836 129 --ASYDRIYSIEMFEHM 143 (291)
Q Consensus 129 --~~~D~i~~~~~l~~~ 143 (291)
..+|.|+++.+++.-
T Consensus 107 ~~~~~~~iv~NlPy~is 123 (271)
T 3fut_A 107 EVPQGSLLVANLPYHIA 123 (271)
T ss_dssp GSCTTEEEEEEECSSCC
T ss_pred hccCccEEEecCccccc
Confidence 478999999877543
No 262
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.24 E-value=1e-11 Score=115.71 Aligned_cols=148 Identities=7% Similarity=0.022 Sum_probs=96.5
Q ss_pred cCCChHHHHHhhCCCCC---ccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-----
Q 022836 15 YELPTSFFKLVLGKYFK---YSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS----- 86 (291)
Q Consensus 15 yd~~~~~~~~~~~~~~~---y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~----- 86 (291)
.|.-.+.|+.++..... -..|.|-.+ ......+++.+...++.+|||.+||+|.++..+++...
T Consensus 126 ~d~lG~~YE~ll~~~a~~~~~~~G~fyTP--------~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~ 197 (541)
T 2ar0_A 126 RDDFGDMYEGLLQKNANETKSGAGQYFTP--------RPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTND 197 (541)
T ss_dssp ------------------------CCCCC--------HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTT
T ss_pred hhHHHHHHHHHHHHHHHhccccCCeeeCC--------HHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcc
Confidence 35556777777764321 111333322 22334455556667788999999999999988876421
Q ss_pred -------------CCEEEEEcCCHHHHHHHHHHHHHhCCCC-----eEEEEccccCCcc--CCCccEEEEccccccccc-
Q 022836 87 -------------NCKITGICNSKTQKEFIEEQCRVLELQN-----VEIIVADISTFEM--EASYDRIYSIEMFEHMKN- 145 (291)
Q Consensus 87 -------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~-----v~~~~~d~~~~~~--~~~~D~i~~~~~l~~~~~- 145 (291)
..+++|+|+++.+++.|+.++...+++. +.+.++|....+. ..+||+|+++.++.....
T Consensus 198 ~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~ 277 (541)
T 2ar0_A 198 LDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGT 277 (541)
T ss_dssp TTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSC
T ss_pred cccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccch
Confidence 2479999999999999999988877754 7889999876532 268999999998865422
Q ss_pred -------------HHHHHHHHHhccccCeeEEEEeecc
Q 022836 146 -------------YQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 146 -------------~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
...++..+.+.|||||++.+..+..
T Consensus 278 ~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 278 NITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp CCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred hhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 2368999999999999998887654
No 263
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.24 E-value=1.7e-11 Score=105.75 Aligned_cols=89 Identities=21% Similarity=0.236 Sum_probs=75.8
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--- 127 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--- 127 (291)
+++.+++.+...++.+|||+|||+|.++..+++.+|+.+|+|+|+|+.+++.|++++...+ +++.++++|+.+++.
T Consensus 14 Ll~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 14 MVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLLK 92 (301)
T ss_dssp THHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHHH
Confidence 3556667777788999999999999999999999877899999999999999999988777 589999999988642
Q ss_pred --C-CCccEEEEcccc
Q 022836 128 --E-ASYDRIYSIEMF 140 (291)
Q Consensus 128 --~-~~~D~i~~~~~l 140 (291)
. .+||.|+++...
T Consensus 93 ~~g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 93 TLGIEKVDGILMDLGV 108 (301)
T ss_dssp HTTCSCEEEEEEECSC
T ss_pred hcCCCCCCEEEEcCcc
Confidence 1 479999987644
No 264
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.22 E-value=4.3e-11 Score=100.93 Aligned_cols=88 Identities=14% Similarity=0.252 Sum_probs=73.7
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 128 (291)
...++.+++.++..++.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++.. .++++++++|+.+++.+
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDFS 90 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCHH
Confidence 345667788888888999999999999999999987 67999999999999999988754 34899999999997653
Q ss_pred -----CCccEEEEccccc
Q 022836 129 -----ASYDRIYSIEMFE 141 (291)
Q Consensus 129 -----~~~D~i~~~~~l~ 141 (291)
++|| |+++.++.
T Consensus 91 ~~~~~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 91 SVKTDKPLR-VVGNLPYN 107 (255)
T ss_dssp GSCCSSCEE-EEEECCHH
T ss_pred HhccCCCeE-EEecCCcc
Confidence 3577 77776663
No 265
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.20 E-value=3.3e-11 Score=105.51 Aligned_cols=108 Identities=18% Similarity=0.142 Sum_probs=82.8
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhC---C-----CCeEEEEccccCCcc-----C
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE---L-----QNVEIIVADISTFEM-----E 128 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~-----~~v~~~~~d~~~~~~-----~ 128 (291)
+++.+||+||||+|..++.+++.. ..+|++||+++.+++.+++++...+ + ++++++.+|+..+.. .
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~-~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEEEECChhHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 467899999999999999998764 4899999999999999999865321 2 269999999988643 3
Q ss_pred CCccEEEEcccc-c--ccc---cHHHHHHHH----HhccccCeeEEEEeecc
Q 022836 129 ASYDRIYSIEMF-E--HMK---NYQNLLKKI----SKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 ~~~D~i~~~~~l-~--~~~---~~~~~l~~~----~~~LkpgG~l~~~~~~~ 170 (291)
++||+|++...- . ..+ ....+++.+ .++|+|||++++...+.
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 789999998643 1 111 224555555 89999999999976544
No 266
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.17 E-value=2.2e-10 Score=109.89 Aligned_cols=121 Identities=16% Similarity=0.136 Sum_probs=93.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC------------------------------------------CC
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY------------------------------------------SN 87 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~------------------------------------------~~ 87 (291)
.+...++...+..++.+|||.+||+|.+++.++... +.
T Consensus 177 ~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~ 256 (703)
T 3v97_A 177 TLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 256 (703)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCC
Confidence 445566777777888999999999999999887642 12
Q ss_pred CEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCccC---CCccEEEEccccccc----ccHHHHHHHHH---hc
Q 022836 88 CKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEME---ASYDRIYSIEMFEHM----KNYQNLLKKIS---KW 156 (291)
Q Consensus 88 ~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~---~~~D~i~~~~~l~~~----~~~~~~l~~~~---~~ 156 (291)
.+++|+|+++.+++.|++|+...|++ .+.+.++|+.++..+ ++||+|+++.++..- .+...+.+.+. +.
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~ 336 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKN 336 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHh
Confidence 58999999999999999999999995 499999999987544 289999999987532 23444444444 44
Q ss_pred cccCeeEEEEeecc
Q 022836 157 MKEDTLLFVHHFCH 170 (291)
Q Consensus 157 LkpgG~l~~~~~~~ 170 (291)
+.|||.+++.+...
T Consensus 337 ~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 337 QFGGWNLSLFSASP 350 (703)
T ss_dssp HCTTCEEEEEESCH
T ss_pred hCCCCeEEEEeCCH
Confidence 55899998877654
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.15 E-value=5.9e-11 Score=100.35 Aligned_cols=81 Identities=14% Similarity=0.108 Sum_probs=67.2
Q ss_pred CCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCH-------HHHHHHHHHHHHhCCC-CeEEEEccccCCc--cC-
Q 022836 60 RLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSK-------TQKEFIEEQCRVLELQ-NVEIIVADISTFE--ME- 128 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~-------~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~--~~- 128 (291)
...++.+|||+|||+|..+..+++. +.+|+++|+|+ .+++.++++++.+++. +++++++|+.++. .+
T Consensus 80 ~~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 80 NHTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp TGGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHH
T ss_pred CcCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhc
Confidence 4456789999999999999999986 78999999999 9999999888777763 5999999998852 22
Q ss_pred --CCccEEEEcccccc
Q 022836 129 --ASYDRIYSIEMFEH 142 (291)
Q Consensus 129 --~~~D~i~~~~~l~~ 142 (291)
.+||+|+++.++.+
T Consensus 158 ~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHCCCSEEEECCCC--
T ss_pred cCCCccEEEECCCCCC
Confidence 58999999887654
No 268
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.14 E-value=3.6e-10 Score=106.00 Aligned_cols=128 Identities=16% Similarity=0.209 Sum_probs=90.1
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHcCC----CCCCEEEEEcCCcchH---HHHHHHHC-CCCEEEEEcCCHHHHHHHHHHH
Q 022836 36 YFSDASKTLEDAEKAMLELYCERSRL----EDGHTVLDVGCGWGSL---SLYIAQKY-SNCKITGICNSKTQKEFIEEQC 107 (291)
Q Consensus 36 ~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~vLDiGcG~G~~---~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~ 107 (291)
.|+.+....+..+.+....+.++... .....|||+|||+|.+ +..++++. ...+|++||.|+ +...+++..
T Consensus 326 vFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v 404 (637)
T 4gqb_A 326 VFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENW 404 (637)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHH
T ss_pred hhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHH
Confidence 34444444555556666666555422 2346899999999998 44444442 123789999998 456778888
Q ss_pred HHhCC-CCeEEEEccccCCccCCCccEEEEcccccc--cccHHHHHHHHHhccccCeeEE
Q 022836 108 RVLEL-QNVEIIVADISTFEMEASYDRIYSIEMFEH--MKNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 108 ~~~~~-~~v~~~~~d~~~~~~~~~~D~i~~~~~l~~--~~~~~~~l~~~~~~LkpgG~l~ 164 (291)
+.++. ++|+++++|++++..++++|+|||-.+=.. -+.....+....+.|||||+++
T Consensus 405 ~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 405 QFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp HHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred HhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 88888 579999999999988899999998432111 1344577888899999999864
No 269
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.13 E-value=1.6e-10 Score=107.55 Aligned_cols=147 Identities=12% Similarity=0.050 Sum_probs=102.8
Q ss_pred cCCChHHHHHhhCC---CCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCC-----
Q 022836 15 YELPTSFFKLVLGK---YFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYS----- 86 (291)
Q Consensus 15 yd~~~~~~~~~~~~---~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~----- 86 (291)
.|.-.+.|+.++.. ...-..|.|-.+ ......+++.+...++ +|||.+||+|.+...+++...
T Consensus 202 ~D~lG~~yE~ll~~~a~~~~k~~G~fyTP--------~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~ 272 (544)
T 3khk_A 202 KDILGHVYEYFLGQFALAEGKQGGQYYTP--------KSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANV 272 (544)
T ss_dssp CCSHHHHHHHHHHHHHHTTTCCSTTTCCC--------HHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhhCccCCeEeCC--------HHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccc
Confidence 45556788877742 111122444333 3344555555555555 999999999999888754321
Q ss_pred ----------CCEEEEEcCCHHHHHHHHHHHHHhCCC-CeEEEEccccCCcc--CCCccEEEEccccccc----------
Q 022836 87 ----------NCKITGICNSKTQKEFIEEQCRVLELQ-NVEIIVADISTFEM--EASYDRIYSIEMFEHM---------- 143 (291)
Q Consensus 87 ----------~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~--~~~~D~i~~~~~l~~~---------- 143 (291)
...++|+|+++.++..|+.++...|++ ++.+.++|....+. ..+||+|+++.++..-
T Consensus 273 ~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d 352 (544)
T 3khk_A 273 KHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADD 352 (544)
T ss_dssp HTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTC
T ss_pred cccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhh
Confidence 458999999999999999999888873 34447888766442 2789999999988631
Q ss_pred ---------------c----cHHHHHHHHHhccccCeeEEEEeecc
Q 022836 144 ---------------K----NYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 144 ---------------~----~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+ ..-.++..+.+.|+|||++.+..|..
T Consensus 353 ~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 353 PRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp GGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred hhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 0 01258999999999999998887753
No 270
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.11 E-value=5.4e-10 Score=103.87 Aligned_cols=110 Identities=14% Similarity=0.070 Sum_probs=89.2
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHC---CCCEEEEEcCCHHHHHHHHHHHHHhCC--CCeEEEEccccCC--cc--CCCc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKY---SNCKITGICNSKTQKEFIEEQCRVLEL--QNVEIIVADISTF--EM--EASY 131 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~v~~~~~d~~~~--~~--~~~~ 131 (291)
..++.+|||.+||+|.+...+++.. +...++|+|+++.++..|+.++...|+ +++.+.++|.... +. ..+|
T Consensus 219 ~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 219 DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccc
Confidence 3467899999999999999888774 257899999999999999999988888 4688999998875 32 2789
Q ss_pred cEEEEccccccc--------cc---------------HHHHHHHHHhccc-cCeeEEEEeecc
Q 022836 132 DRIYSIEMFEHM--------KN---------------YQNLLKKISKWMK-EDTLLFVHHFCH 170 (291)
Q Consensus 132 D~i~~~~~l~~~--------~~---------------~~~~l~~~~~~Lk-pgG~l~~~~~~~ 170 (291)
|+|++++++..- .+ --.++..+.+.|+ |||++.+..|..
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 999999877421 00 1247899999999 999998887764
No 271
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.08 E-value=3.4e-10 Score=96.70 Aligned_cols=89 Identities=16% Similarity=0.259 Sum_probs=70.6
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCC--CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSN--CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE 126 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 126 (291)
...++.+++.+...++.+|||||||+|.++..+++..+. .+|+|+|+|+.+++.++++. .++++++++|+.+++
T Consensus 28 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~ 103 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFD 103 (279)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCC
Confidence 345667778888888999999999999999999987421 33999999999999999883 247999999999987
Q ss_pred cCC-------CccEEEEccccc
Q 022836 127 MEA-------SYDRIYSIEMFE 141 (291)
Q Consensus 127 ~~~-------~~D~i~~~~~l~ 141 (291)
++. ..+.|+++.++.
T Consensus 104 ~~~~~~~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 104 FGSIARPGDEPSLRIIGNLPYN 125 (279)
T ss_dssp GGGGSCSSSSCCEEEEEECCHH
T ss_pred hhHhcccccCCceEEEEccCcc
Confidence 552 234677776653
No 272
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.06 E-value=1e-09 Score=92.29 Aligned_cols=110 Identities=19% Similarity=0.227 Sum_probs=79.6
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 128 (291)
...++.+++.+...++.+|||||||+|.++..+++. +..+|+++|+|+.+++.++++ +..+++++++|+.+++.+
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~~~~ 91 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI----GDERLEVINEDASKFPFC 91 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTCCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhCChh
Confidence 456677888888888999999999999999999976 248999999999999998876 234799999999998765
Q ss_pred C--CccEEEEcccccccccHHHHHHHHHhcc--ccCeeEEEE
Q 022836 129 A--SYDRIYSIEMFEHMKNYQNLLKKISKWM--KEDTLLFVH 166 (291)
Q Consensus 129 ~--~~D~i~~~~~l~~~~~~~~~l~~~~~~L--kpgG~l~~~ 166 (291)
. ....|+++.+++ + ...++.++.+.. -+.+.++++
T Consensus 92 ~~~~~~~vv~NlPy~-i--~~~il~~ll~~~~~~~~~~~m~Q 130 (249)
T 3ftd_A 92 SLGKELKVVGNLPYN-V--ASLIIENTVYNKDCVPLAVFMVQ 130 (249)
T ss_dssp GSCSSEEEEEECCTT-T--HHHHHHHHHHTGGGCSEEEEEEE
T ss_pred HccCCcEEEEECchh-c--cHHHHHHHHhcCCCCceEEEEEe
Confidence 2 123667776663 2 233444444332 234455553
No 273
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.04 E-value=1.5e-10 Score=97.54 Aligned_cols=89 Identities=17% Similarity=0.246 Sum_probs=70.1
Q ss_pred HHHHHHcCCCCC--CEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh-------C-C-CCeEEEEcc
Q 022836 53 ELYCERSRLEDG--HTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-------E-L-QNVEIIVAD 121 (291)
Q Consensus 53 ~~~~~~~~~~~~--~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~-~-~~v~~~~~d 121 (291)
+.+++.+...++ .+|||+|||+|..+..++.. +++|+++|+++.+.+.++++.+.. + + ++++++++|
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D 153 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHAS 153 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESC
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECC
Confidence 445566666677 89999999999999999988 678999999998877776665422 2 3 479999999
Q ss_pred ccCCcc--CCCccEEEEccccccc
Q 022836 122 ISTFEM--EASYDRIYSIEMFEHM 143 (291)
Q Consensus 122 ~~~~~~--~~~~D~i~~~~~l~~~ 143 (291)
..++.. +.+||+|+++.++.+-
T Consensus 154 ~~~~L~~~~~~fDvV~lDP~y~~~ 177 (258)
T 2oyr_A 154 SLTALTDITPRPQVVYLDPMFPHK 177 (258)
T ss_dssp HHHHSTTCSSCCSEEEECCCCCCC
T ss_pred HHHHHHhCcccCCEEEEcCCCCCc
Confidence 987432 2579999999988664
No 274
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=99.04 E-value=6.1e-10 Score=104.46 Aligned_cols=100 Identities=16% Similarity=0.166 Sum_probs=74.2
Q ss_pred CCCEEEEEcCCcchHHHHH---HHHC----------CCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc-
Q 022836 63 DGHTVLDVGCGWGSLSLYI---AQKY----------SNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM- 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~l---a~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~- 127 (291)
.+..|||+|||+|.++... ++.. ...+|++||.|+..+..++.... +++ ++|+++.+|++++..
T Consensus 409 ~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp 487 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGI 487 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhcccc
Confidence 3568999999999996432 2211 13499999999987766555443 676 469999999999876
Q ss_pred -----CCCccEEEEccccccc---ccHHHHHHHHHhccccCeeEE
Q 022836 128 -----EASYDRIYSIEMFEHM---KNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 128 -----~~~~D~i~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~ 164 (291)
++++|+|||-.+ ..+ +-..+.+..+.+.|||||+++
T Consensus 488 ~~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 488 AKDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 689999999554 222 345678888899999999864
No 275
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.04 E-value=3.3e-10 Score=101.33 Aligned_cols=77 Identities=19% Similarity=0.219 Sum_probs=67.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh--CCCCeEEEEccccCC-cc--CCCccEEEEc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--ELQNVEIIVADISTF-EM--EASYDRIYSI 137 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~v~~~~~d~~~~-~~--~~~~D~i~~~ 137 (291)
++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.++++++.. |+++++++++|+.+. .. .++||+|+++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 4889999999999999999876 779999999999999999999988 777899999999985 22 1589999998
Q ss_pred cccc
Q 022836 138 EMFE 141 (291)
Q Consensus 138 ~~l~ 141 (291)
.+..
T Consensus 171 PPrr 174 (410)
T 3ll7_A 171 PARR 174 (410)
T ss_dssp CEEC
T ss_pred CCCc
Confidence 6553
No 276
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.99 E-value=3.4e-09 Score=90.39 Aligned_cols=110 Identities=12% Similarity=0.058 Sum_probs=87.7
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh--C---CCCeEEEEccccCCccC--CCccE
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL--E---LQNVEIIVADISTFEME--ASYDR 133 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~---~~~v~~~~~d~~~~~~~--~~~D~ 133 (291)
.+...+||-||.|.|..++.+.+..+..+|+.||+++..++.+++.+... + -++++++.+|...+... ++||+
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 45678999999999999999997655679999999999999999876531 2 25899999999997544 78999
Q ss_pred EEEccccccc--c--cHHHHHHHHHhccccCeeEEEEeecc
Q 022836 134 IYSIEMFEHM--K--NYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 134 i~~~~~l~~~--~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
|+....-..- . -..++++.++++|+|||+++.+..+.
T Consensus 161 Ii~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp 201 (294)
T 3o4f_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp EEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEES
T ss_pred EEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCc
Confidence 9986432111 1 23578999999999999999876544
No 277
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.98 E-value=1.8e-08 Score=81.45 Aligned_cols=111 Identities=15% Similarity=0.184 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC---CCeEEEEc
Q 022836 44 LEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL---QNVEIIVA 120 (291)
Q Consensus 44 l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~ 120 (291)
+...+.+.+...+ .+..+|||+||| ..+..+++. ++.+|+.+|.+++..+.++++++..|+ ++++++.+
T Consensus 16 v~~~~~~~L~~~l-----~~a~~VLEiGtG--ySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~g 87 (202)
T 3cvo_A 16 MPPAEAEALRMAY-----EEAEVILEYGSG--GSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWT 87 (202)
T ss_dssp SCHHHHHHHHHHH-----HHCSEEEEESCS--HHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEEC
T ss_pred CCHHHHHHHHHHh-----hCCCEEEEECch--HHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEe
Confidence 4444455555433 246799999985 677777763 478999999999999999999999885 47999999
Q ss_pred cccCC---------------c--------cC--CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 121 DISTF---------------E--------ME--ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 121 d~~~~---------------~--------~~--~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
|+.+. + .. ++||+|+...... ...+..+.+.|+|||++++..
T Consensus 88 da~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~-----~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 88 DIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR-----VGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp CCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH-----HHHHHHHHHHCSSCEEEEETT
T ss_pred CchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc-----hhHHHHHHHhcCCCeEEEEeC
Confidence 96542 1 12 6899999987432 355666779999999997743
No 278
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.94 E-value=5.9e-10 Score=93.86 Aligned_cols=86 Identities=13% Similarity=0.161 Sum_probs=67.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCE--EEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCK--ITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM 127 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~--v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 127 (291)
..++.+++.+...++.+|||||||+|.++. +. + +.+ |+++|+++.+++.++++.... ++++++++|+.+++.
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~--~~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~ 81 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-G--ERLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNF 81 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-H--TTCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCH
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-h--CCCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCH
Confidence 456677777788889999999999999999 65 4 345 999999999999988766432 479999999998764
Q ss_pred CC------CccEEEEccccc
Q 022836 128 EA------SYDRIYSIEMFE 141 (291)
Q Consensus 128 ~~------~~D~i~~~~~l~ 141 (291)
+. ..|.|+++.++.
T Consensus 82 ~~~~~~~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 82 GELAEKMGQPLRVFGNLPYN 101 (252)
T ss_dssp HHHHHHHTSCEEEEEECCTT
T ss_pred HHhhcccCCceEEEECCCCC
Confidence 32 346888887764
No 279
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.94 E-value=4.6e-10 Score=94.01 Aligned_cols=118 Identities=19% Similarity=0.278 Sum_probs=78.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME- 128 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~- 128 (291)
-++.++.++..+.++.+|||||||+|.++..++++.+...++|+|++..+....... ...+. ++.....++......
T Consensus 61 ~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g~-~ii~~~~~~dv~~l~~ 138 (277)
T 3evf_A 61 AKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLGW-NIITFKDKTDIHRLEP 138 (277)
T ss_dssp HHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTTG-GGEEEECSCCTTTSCC
T ss_pred HHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCCC-CeEEEeccceehhcCC
Confidence 356677777667888999999999999999988765445788888874421000000 00111 445556665444444
Q ss_pred CCccEEEEccccc----ccccHH--HHHHHHHhccccC-eeEEEEeec
Q 022836 129 ASYDRIYSIEMFE----HMKNYQ--NLLKKISKWMKED-TLLFVHHFC 169 (291)
Q Consensus 129 ~~~D~i~~~~~l~----~~~~~~--~~l~~~~~~Lkpg-G~l~~~~~~ 169 (291)
.+||+|+|..+.+ .++... .+++.+.++|+|| |.+++..+.
T Consensus 139 ~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 139 VKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 7899999987665 222212 3578889999999 999997775
No 280
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.94 E-value=7.4e-09 Score=98.62 Aligned_cols=110 Identities=10% Similarity=0.028 Sum_probs=81.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCC---CCEEEEEcCCHHHHHHH--HHHHHH----hCCCCeEEEEccccCCcc--CCC
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYS---NCKITGICNSKTQKEFI--EEQCRV----LELQNVEIIVADISTFEM--EAS 130 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~---~~~v~~vD~s~~~~~~a--~~~~~~----~~~~~v~~~~~d~~~~~~--~~~ 130 (291)
.++.+|||.|||+|.++..+++..+ ..+++|+|+++.+++.| +.++.. .+.+...+...|+..... ..+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 4678999999999999999998763 35899999999999998 444333 233334566667766322 278
Q ss_pred ccEEEEccccccc---c--------------------------cHHHHHHHHHhccccCeeEEEEeeccC
Q 022836 131 YDRIYSIEMFEHM---K--------------------------NYQNLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 131 ~D~i~~~~~l~~~---~--------------------------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
||+|+++.++... . -...+++.+.+.|+|||++.+..|...
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~ 469 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQY 469 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHH
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHH
Confidence 9999999998321 0 023468889999999999999887653
No 281
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.89 E-value=1.1e-08 Score=90.53 Aligned_cols=124 Identities=13% Similarity=0.123 Sum_probs=84.3
Q ss_pred HHHHHHHHHHcCCCC-----CCEEEEEcCCcchHHHHHHH--------HC-------CCCEEEEEcCCHHHHHHHHHHHH
Q 022836 49 KAMLELYCERSRLED-----GHTVLDVGCGWGSLSLYIAQ--------KY-------SNCKITGICNSKTQKEFIEEQCR 108 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~-----~~~vLDiGcG~G~~~~~la~--------~~-------~~~~v~~vD~s~~~~~~a~~~~~ 108 (291)
..++...++.+...+ ..+|+|+|||+|..+..++. ++ |..+|...|+..+.....-+...
T Consensus 33 ~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~ 112 (374)
T 3b5i_A 33 LHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLP 112 (374)
T ss_dssp HHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSC
T ss_pred HHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhh
Confidence 556666666665543 58999999999999888732 22 56789999987776544333222
Q ss_pred Hh-----------CC-CCeEEEEc---cccCCccC-CCccEEEEcccccccc----------------------------
Q 022836 109 VL-----------EL-QNVEIIVA---DISTFEME-ASYDRIYSIEMFEHMK---------------------------- 144 (291)
Q Consensus 109 ~~-----------~~-~~v~~~~~---d~~~~~~~-~~~D~i~~~~~l~~~~---------------------------- 144 (291)
.. +. .+-.|+.+ .+-.-.++ +++|+|+|+.++||+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v 192 (374)
T 3b5i_A 113 PLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKT 192 (374)
T ss_dssp CBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHH
T ss_pred hhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHH
Confidence 10 00 01123333 22222334 8999999999999985
Q ss_pred ----------cHHHHHHHHHhccccCeeEEEEeeccCC
Q 022836 145 ----------NYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 145 ----------~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
|...+|+...+.|+|||++++...+..+
T Consensus 193 ~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 193 TTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCC
Confidence 4455788899999999999999998765
No 282
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.84 E-value=1.2e-08 Score=89.94 Aligned_cols=114 Identities=15% Similarity=0.033 Sum_probs=91.1
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC------CCeEEEEccccCCcc--C
Q 022836 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL------QNVEIIVADISTFEM--E 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~--~ 128 (291)
..++.++|.+|||+++|.|+-+..+++..++..|+++|+++.-++.++++++..+. .++.+...|...+.. .
T Consensus 142 ~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~ 221 (359)
T 4fzv_A 142 LALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEG 221 (359)
T ss_dssp HHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHST
T ss_pred HHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhcc
Confidence 34578899999999999999999999876566899999999999999999987764 368888899887642 2
Q ss_pred CCccEEEEcccccc-----c---c----------------cHHHHHHHHHhccccCeeEEEEeecc
Q 022836 129 ASYDRIYSIEMFEH-----M---K----------------NYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 129 ~~~D~i~~~~~l~~-----~---~----------------~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
+.||.|++..+... . + -..+++.+..+.|||||+|+-++.+.
T Consensus 222 ~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 222 DTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp TCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred ccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 78999998654321 0 0 12468899999999999999888764
No 283
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.77 E-value=8.9e-08 Score=88.91 Aligned_cols=146 Identities=15% Similarity=0.127 Sum_probs=103.9
Q ss_pred CCChHHHHHhhCC---CCCccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-------
Q 022836 16 ELPTSFFKLVLGK---YFKYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY------- 85 (291)
Q Consensus 16 d~~~~~~~~~~~~---~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~------- 85 (291)
|.-.+.|+.++.. ... ..|-|-.+ ....+.+++.+...++.+|+|.+||+|++...+.+..
T Consensus 176 d~lG~~yE~ll~~~~~~~g-~~GqfyTP--------~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~ 246 (530)
T 3ufb_A 176 HTLSRLYETMLREMRDAAG-DSGEFYTP--------RPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTV 246 (530)
T ss_dssp HHHHHHHHHHHHHHTTSSS-SCCCCCCC--------HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSH
T ss_pred HHHHHHHHHHHHHHHHhcC-cCceECCc--------HHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccch
Confidence 4456778888753 111 12444333 4455666777777888999999999999988776431
Q ss_pred ------CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-----CCccEEEEcccccccc----------
Q 022836 86 ------SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-----ASYDRIYSIEMFEHMK---------- 144 (291)
Q Consensus 86 ------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-----~~~D~i~~~~~l~~~~---------- 144 (291)
....++|+|+++.+...|+-++--.|.+...+..+|....+.. .+||+|++++++..-.
T Consensus 247 ~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~ 326 (530)
T 3ufb_A 247 EDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPE 326 (530)
T ss_dssp HHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCG
T ss_pred hHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCch
Confidence 1246999999999999999988888886667788887654321 5799999999984221
Q ss_pred -----c-HHHHHHHHHhccc-------cCeeEEEEeecc
Q 022836 145 -----N-YQNLLKKISKWMK-------EDTLLFVHHFCH 170 (291)
Q Consensus 145 -----~-~~~~l~~~~~~Lk-------pgG~l~~~~~~~ 170 (291)
+ ...++..+.+.|| |||++.+..|..
T Consensus 327 ~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g 365 (530)
T 3ufb_A 327 DMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNG 365 (530)
T ss_dssp GGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHH
T ss_pred hcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecch
Confidence 1 1246777777776 799999888753
No 284
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.77 E-value=2.2e-09 Score=90.06 Aligned_cols=117 Identities=21% Similarity=0.260 Sum_probs=77.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc--cccCCcc
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA--DISTFEM 127 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~--d~~~~~~ 127 (291)
-++.++.++..+.++.+|||||||+|.++.+++++.+...|.|+|++..+...+.. ....+. ++..... |+..++
T Consensus 77 fKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~-~~~~g~-~ii~~~~~~dv~~l~- 153 (282)
T 3gcz_A 77 AKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM-RTTLGW-NLIRFKDKTDVFNME- 153 (282)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCGGGSC-
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc-cccCCC-ceEEeeCCcchhhcC-
Confidence 35667777777788999999999999999999876545679999997653211110 000111 3333333 333332
Q ss_pred CCCccEEEEccccc----ccccHH--HHHHHHHhccccC--eeEEEEeec
Q 022836 128 EASYDRIYSIEMFE----HMKNYQ--NLLKKISKWMKED--TLLFVHHFC 169 (291)
Q Consensus 128 ~~~~D~i~~~~~l~----~~~~~~--~~l~~~~~~Lkpg--G~l~~~~~~ 169 (291)
..++|+|+|..+.. .++... .+++-+.++|+|| |.+++-.+.
T Consensus 154 ~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 154 VIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 27899999987765 122111 3577778999999 999998775
No 285
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.70 E-value=1.2e-07 Score=71.63 Aligned_cols=115 Identities=19% Similarity=0.199 Sum_probs=75.5
Q ss_pred CccccccCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcc-hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH
Q 022836 31 KYSCCYFSDASKTLEDAEKAMLELYCERSRLEDGHTVLDVGCGWG-SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV 109 (291)
Q Consensus 31 ~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G-~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~ 109 (291)
+.+++..+... .+ .+.....+.+.. .++.+|||+|||.| ..+..|+++. +..|+++|+++..++
T Consensus 9 ~~~~~~~~~~~-~m---~e~LaeYI~~~~--~~~~rVlEVG~G~g~~vA~~La~~~-g~~V~atDInp~Av~-------- 73 (153)
T 2k4m_A 9 HHSSGLVPRGS-HM---WNDLAVYIIRCS--GPGTRVVEVGAGRFLYVSDYIRKHS-KVDLVLTDIKPSHGG-------- 73 (153)
T ss_dssp CCCCCCCCCCC-HH---HHHHHHHHHHHS--CSSSEEEEETCTTCCHHHHHHHHHS-CCEEEEECSSCSSTT--------
T ss_pred cccCCcccchh-hH---HHHHHHHHHhcC--CCCCcEEEEccCCChHHHHHHHHhC-CCeEEEEECCccccc--------
Confidence 34556655332 23 233444444443 45679999999999 5999999744 899999999998543
Q ss_pred hCCCCeEEEEccccCCccC--CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeeccCC
Q 022836 110 LELQNVEIIVADISTFEME--ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 110 ~~~~~v~~~~~d~~~~~~~--~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
+++.|+.+.... +.||+|.+..+=. ++...+-++.+ +-|.-++|...+.+.
T Consensus 74 -------~v~dDiF~P~~~~Y~~~DLIYsirPP~---El~~~i~~lA~--~v~adliI~pL~~E~ 126 (153)
T 2k4m_A 74 -------IVRDDITSPRMEIYRGAALIYSIRPPA---EIHSSLMRVAD--AVGARLIIKPLTGED 126 (153)
T ss_dssp -------EECCCSSSCCHHHHTTEEEEEEESCCT---TTHHHHHHHHH--HHTCEEEEECBTTBC
T ss_pred -------eEEccCCCCcccccCCcCEEEEcCCCH---HHHHHHHHHHH--HcCCCEEEEcCCCCc
Confidence 889999885544 6899998765543 33444444444 246677776555443
No 286
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.65 E-value=1.3e-07 Score=80.48 Aligned_cols=121 Identities=7% Similarity=0.013 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHcC-CCCCCEEEEEcCCcchHHHHHHHHC-----CCCEEEEEcCCH----------------------
Q 022836 46 DAEKAMLELYCERSR-LEDGHTVLDVGCGWGSLSLYIAQKY-----SNCKITGICNSK---------------------- 97 (291)
Q Consensus 46 ~~~~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~-----~~~~v~~vD~s~---------------------- 97 (291)
..+...+..+++.+. .....+|||+|+..|..+..++... ++.+|+++|...
T Consensus 88 ~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~ 167 (282)
T 2wk1_A 88 IKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRN 167 (282)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCccccccccccccccccccc
Confidence 333445555555432 2335599999999999998887653 367899999642
Q ss_pred ----HHHHHHHHHHHHhCC--CCeEEEEccccCCcc---CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 98 ----TQKEFIEEQCRVLEL--QNVEIIVADISTFEM---EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 98 ----~~~~~a~~~~~~~~~--~~v~~~~~d~~~~~~---~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
..++.+++++++.|+ ++++++.+|+.+... .++||+|+...-. .......++.+.+.|+|||++++...
T Consensus 168 ~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 168 SVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp HHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred ccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 146778899999887 689999999987432 2689999998643 23456789999999999999988554
No 287
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.60 E-value=8.2e-08 Score=85.06 Aligned_cols=107 Identities=14% Similarity=0.086 Sum_probs=75.3
Q ss_pred CCEEEEEcCCcchHHHHHHHH-----------------CCCCEEEEEcCC-----------HHHHHHHHHHHHHhCC-CC
Q 022836 64 GHTVLDVGCGWGSLSLYIAQK-----------------YSNCKITGICNS-----------KTQKEFIEEQCRVLEL-QN 114 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~la~~-----------------~~~~~v~~vD~s-----------~~~~~~a~~~~~~~~~-~~ 114 (291)
..+|+|+||++|..+..+... .|..+|+..|+. +.+.+.++ +..|. .+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~---~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLE---KENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHH---HHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhh---hhccCCCC
Confidence 589999999999999888765 255789999987 33332221 12221 13
Q ss_pred eEEEEccccCC---ccC-CCccEEEEcccccccccHH---------------------------------------HHHH
Q 022836 115 VEIIVADISTF---EME-ASYDRIYSIEMFEHMKNYQ---------------------------------------NLLK 151 (291)
Q Consensus 115 v~~~~~d~~~~---~~~-~~~D~i~~~~~l~~~~~~~---------------------------------------~~l~ 151 (291)
..|+.+....+ .++ +++|+|+|+.++||+.+.+ .+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45666655543 334 8999999999999984332 1266
Q ss_pred HHHhccccCeeEEEEeeccCCc
Q 022836 152 KISKWMKEDTLLFVHHFCHKTF 173 (291)
Q Consensus 152 ~~~~~LkpgG~l~~~~~~~~~~ 173 (291)
...+.|+|||++++...+..+.
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTT
T ss_pred HHHHHhccCCeEEEEEecCCCc
Confidence 6689999999999999988664
No 288
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.57 E-value=8.3e-08 Score=80.87 Aligned_cols=84 Identities=8% Similarity=0.093 Sum_probs=70.3
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--- 127 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--- 127 (291)
+++.+++.+...++..+||.+||.|+.+..++++ +.+|+|+|.++.+++.+++ ... +++.++++++.++..
T Consensus 10 Ll~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 10 LYQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp THHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHH
T ss_pred HHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHH
Confidence 4667778888888999999999999999999987 7799999999999998887 533 489999999998642
Q ss_pred --C-CCccEEEEcccc
Q 022836 128 --E-ASYDRIYSIEMF 140 (291)
Q Consensus 128 --~-~~~D~i~~~~~l 140 (291)
. .++|.|++...+
T Consensus 84 ~~g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 84 ALGVERVDGILADLGV 99 (285)
T ss_dssp HTTCSCEEEEEEECSC
T ss_pred HcCCCCcCEEEeCCcc
Confidence 1 579999986544
No 289
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.54 E-value=1.1e-07 Score=80.03 Aligned_cols=104 Identities=13% Similarity=0.107 Sum_probs=72.2
Q ss_pred CCCCEEEEEcCCcchHHHHHHHH-------CCC-----CEEEEEcCCH---HHHH-----------HHHHHHHHh-----
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQK-------YSN-----CKITGICNSK---TQKE-----------FIEEQCRVL----- 110 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~-------~~~-----~~v~~vD~s~---~~~~-----------~a~~~~~~~----- 110 (291)
.++.+|||+|+|+|..+..+++. .|. .+++++|..| +.+. .++++....
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 45679999999999988887654 453 5899999876 4333 455554431
Q ss_pred ---------CCCCeEEEEccccCCccC--C----CccEEEEcccc-ccccc--HHHHHHHHHhccccCeeEEE
Q 022836 111 ---------ELQNVEIIVADISTFEME--A----SYDRIYSIEMF-EHMKN--YQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 111 ---------~~~~v~~~~~d~~~~~~~--~----~~D~i~~~~~l-~~~~~--~~~~l~~~~~~LkpgG~l~~ 165 (291)
+..+++++.+|+.+.... . .||+|+....- ...++ ...+++.+.++|+|||+|+.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 113578999998874221 2 79999996421 11122 36799999999999999875
No 290
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.50 E-value=3.7e-07 Score=80.29 Aligned_cols=106 Identities=16% Similarity=0.108 Sum_probs=80.7
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh---CC-----CCeEEEEccccCCcc-----C
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL---EL-----QNVEIIVADISTFEM-----E 128 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~-----~~v~~~~~d~~~~~~-----~ 128 (291)
.++.+||=||.|.|..++++.+. +..+|+.||+++..++.+++.+... .. ++++++.+|...+.. .
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 35689999999999999999864 5689999999999999999865321 01 358999999887542 2
Q ss_pred CCccEEEEccccccc----------ccHHHHHHHHHhccccCeeEEEEee
Q 022836 129 ASYDRIYSIEMFEHM----------KNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~----------~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
++||+|+....-... --..++++.+++.|+|||+++.+.-
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 689999987422110 1135788999999999999988653
No 291
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.49 E-value=2e-07 Score=75.82 Aligned_cols=119 Identities=18% Similarity=0.261 Sum_probs=82.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc-cccCCcc
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA-DISTFEM 127 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~-d~~~~~~ 127 (291)
.-++..+.++..+.++.+||||||++|+++.+++......+|+|+|+...-.+. -..+...|.+.++|..+ |+..++.
T Consensus 64 ~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~gwn~v~fk~gvDv~~~~~ 142 (267)
T 3p8z_A 64 SAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTYGWNIVKLMSGKDVFYLPP 142 (267)
T ss_dssp HHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCTTTTSEEEECSCCGGGCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhcCcCceEEEeccceeecCC
Confidence 345777777777789999999999999999998877644579999986652210 00111234456999999 9876654
Q ss_pred CCCccEEEEccccccc-c--cH---HHHHHHHHhccccCeeEEEEeecc
Q 022836 128 EASYDRIYSIEMFEHM-K--NY---QNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~-~--~~---~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
.++|.|+|...=..- + +. -++|+-+.++|++ |-+++-.+.+
T Consensus 143 -~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~p 189 (267)
T 3p8z_A 143 -EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNP 189 (267)
T ss_dssp -CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCC
T ss_pred -ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccC
Confidence 789999996422111 1 11 2367777899999 7888766644
No 292
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.47 E-value=6.5e-07 Score=78.43 Aligned_cols=86 Identities=13% Similarity=0.194 Sum_probs=63.6
Q ss_pred CCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEccc
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEM 139 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~ 139 (291)
..+|++||||||.+|+++..++++ +.+|++||+.+-. .... ..++|+++++|.....+. .++|+|+|..+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~-----~~l~--~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~ 279 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMA-----QSLM--DTGQVTWLREDGFKFRPTRSNISWMVCDMV 279 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCC-----HHHH--TTTCEEEECSCTTTCCCCSSCEEEEEECCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcC-----hhhc--cCCCeEEEeCccccccCCCCCcCEEEEcCC
Confidence 468999999999999999999987 7899999976421 1111 224899999999998766 78999999866
Q ss_pred ccccccHHHHHHHHHhcccc
Q 022836 140 FEHMKNYQNLLKKISKWMKE 159 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~Lkp 159 (291)
.. +...+..+.++|..
T Consensus 280 ~~----p~~~~~l~~~wl~~ 295 (375)
T 4auk_A 280 EK----PAKVAALMAQWLVN 295 (375)
T ss_dssp SC----HHHHHHHHHHHHHT
T ss_pred CC----hHHhHHHHHHHHhc
Confidence 53 33444444444443
No 293
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.44 E-value=7.5e-08 Score=84.61 Aligned_cols=112 Identities=11% Similarity=0.025 Sum_probs=79.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHH----------------CCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccC
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQK----------------YSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADIST 124 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~----------------~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~ 124 (291)
+...+|+|+||++|..+..+... .|..+|+..|+..+....+-+....... .+..|+.+....
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 34578999999999887765443 3457899999988887665544322000 023455554443
Q ss_pred ---CccC-CCccEEEEccccccccc---------------------------------HHHHHHHHHhccccCeeEEEEe
Q 022836 125 ---FEME-ASYDRIYSIEMFEHMKN---------------------------------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 125 ---~~~~-~~~D~i~~~~~l~~~~~---------------------------------~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
-.++ +++|+|+|+.++||+.+ ...+|+...+.|+|||++++..
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 3344 89999999999999743 2345888899999999999999
Q ss_pred eccCCc
Q 022836 168 FCHKTF 173 (291)
Q Consensus 168 ~~~~~~ 173 (291)
.+..+.
T Consensus 210 ~gr~~~ 215 (359)
T 1m6e_X 210 LGRRSE 215 (359)
T ss_dssp EECSSS
T ss_pred ecCCCC
Confidence 988764
No 294
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.44 E-value=5.9e-07 Score=75.46 Aligned_cols=119 Identities=20% Similarity=0.294 Sum_probs=81.6
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc-cccCCcc
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA-DISTFEM 127 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~-d~~~~~~ 127 (291)
.-++..+.++..+.++.+||||||++|+++.+++.......|+|+|+...-.+. -..+...+.+-|.+..+ |+..+++
T Consensus 80 ~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~-P~~~~ql~w~lV~~~~~~Dv~~l~~ 158 (321)
T 3lkz_A 80 TAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEE-PQLVQSYGWNIVTMKSGVDVFYRPS 158 (321)
T ss_dssp HHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCC-CCCCCBTTGGGEEEECSCCTTSSCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccC-cchhhhcCCcceEEEeccCHhhCCC
Confidence 345777777777788999999999999999988877634579999987651100 00000112223778877 8877665
Q ss_pred CCCccEEEEcccccccccH-------HHHHHHHHhccccC-eeEEEEeecc
Q 022836 128 EASYDRIYSIEMFEHMKNY-------QNLLKKISKWMKED-TLLFVHHFCH 170 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~~~~-------~~~l~~~~~~Lkpg-G~l~~~~~~~ 170 (291)
.++|+|+|.-. +.-+++ -.+|+-+.++|++| |-+++-.+.+
T Consensus 159 -~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 159 -ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp -CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred -CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 67999999765 333221 23677778899998 8888877654
No 295
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.42 E-value=2.3e-06 Score=72.25 Aligned_cols=115 Identities=19% Similarity=0.243 Sum_probs=73.0
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc--cccCCccC
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA--DISTFEME 128 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~--d~~~~~~~ 128 (291)
++.++.++--..++.+||||||++|+++..++++.+...|.|+|+...+...... ....+. ++..... |+..+. +
T Consensus 69 KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~l~-~ 145 (300)
T 3eld_A 69 KIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFTMP-T 145 (300)
T ss_dssp HHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTTSC-C
T ss_pred HHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCC-ceEEeecCceeeecC-C
Confidence 4555555533468999999999999999999976544579999997542100000 000011 2332333 333322 2
Q ss_pred CCccEEEEcccccccc----c---HHHHHHHHHhccccC-eeEEEEeec
Q 022836 129 ASYDRIYSIEMFEHMK----N---YQNLLKKISKWMKED-TLLFVHHFC 169 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~----~---~~~~l~~~~~~Lkpg-G~l~~~~~~ 169 (291)
.++|+|+|..+-. .. | ...+++-+.++|+|| |.+++-.+.
T Consensus 146 ~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 146 EPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 7899999977655 21 1 134577788999999 999998775
No 296
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.32 E-value=2.7e-07 Score=76.19 Aligned_cols=117 Identities=20% Similarity=0.244 Sum_probs=71.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH-hCCCCeEEEEc-cccCCcc
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV-LELQNVEIIVA-DISTFEM 127 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~v~~~~~-d~~~~~~ 127 (291)
-++.++-++.-++|+.+||||||+.|+++.+++++.+-..|.|.++.... . ....... .|..=+.+.++ |+.++.
T Consensus 60 yKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~P~~~~~~Gv~~i~~~~G~Df~~~~- 136 (269)
T 2px2_A 60 AKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EEPMLMQSYGWNIVTMKSGVDVFYKP- 136 (269)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CCCCCCCSTTGGGEEEECSCCGGGSC-
T ss_pred HHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cCCCcccCCCceEEEeeccCCccCCC-
Confidence 45667766666689999999999999999999876211133444443220 0 0000000 11111355556 998754
Q ss_pred CCCccEEEEccccccc---ccHH---HHHHHHHhccccCe-eEEEEeec
Q 022836 128 EASYDRIYSIEMFEHM---KNYQ---NLLKKISKWMKEDT-LLFVHHFC 169 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~---~~~~---~~l~~~~~~LkpgG-~l~~~~~~ 169 (291)
+.++|+|+|...=..- -|.. .+++-+.++|+||| .+++-.+.
T Consensus 137 ~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 137 SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 3689999997633211 1221 25667779999999 89887775
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.19 E-value=6.6e-06 Score=70.74 Aligned_cols=59 Identities=17% Similarity=0.071 Sum_probs=49.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhC
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE 111 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 111 (291)
.++..++.... .++..|||++||+|..+..+++. +.+++|+|+++.+++.+++++....
T Consensus 223 ~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 223 ELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp HHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 45556666554 67889999999999999998876 7899999999999999999987653
No 298
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.00 E-value=3.2e-05 Score=64.96 Aligned_cols=109 Identities=14% Similarity=0.073 Sum_probs=74.3
Q ss_pred HHHHHHHHHc-----CCCCCCEEEEEcC------CcchHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHHHhCCCCeEE
Q 022836 50 AMLELYCERS-----RLEDGHTVLDVGC------GWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEI 117 (291)
Q Consensus 50 ~~~~~~~~~~-----~~~~~~~vLDiGc------G~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~ 117 (291)
.+...+++-+ ..+.+++|||+|+ -+|. ..+.+..|. +.|+++|+.+-.. ... .+
T Consensus 91 ~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s-----------da~-~~ 156 (344)
T 3r24_A 91 AKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS-----------DAD-ST 156 (344)
T ss_dssp HHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC-----------SSS-EE
T ss_pred HHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc-----------CCC-eE
Confidence 3444555433 4578999999996 5676 344555664 6999999977521 113 45
Q ss_pred EEccccCCccCCCccEEEEccccccc-----c------cHHHHHHHHHhccccCeeEEEEeeccCC
Q 022836 118 IVADISTFEMEASYDRIYSIEMFEHM-----K------NYQNLLKKISKWMKEDTLLFVHHFCHKT 172 (291)
Q Consensus 118 ~~~d~~~~~~~~~~D~i~~~~~l~~~-----~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 172 (291)
+++|+.......+||+|+|...-... . -.+.+++-+.+.|+|||.|++-.+-...
T Consensus 157 IqGD~~~~~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 157 LIGDCATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp EESCGGGEEESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred EEccccccccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 89998876656899999996532111 1 1455777788999999999998775443
No 299
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.98 E-value=8e-06 Score=70.42 Aligned_cols=86 Identities=14% Similarity=0.107 Sum_probs=69.8
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc--
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-- 127 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-- 127 (291)
+++++++.+...++..++|..||.|+.+..+++.. |..+|+|+|.++.+++.++ +. ..+++.++++++.++..
T Consensus 45 Ll~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~~~Rv~lv~~nF~~l~~~L 120 (347)
T 3tka_A 45 LLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---DDPRFSIIHGPFSALGEYV 120 (347)
T ss_dssp TTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---CCTTEEEEESCGGGHHHHH
T ss_pred cHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---cCCcEEEEeCCHHHHHHHH
Confidence 67888899999999999999999999999999874 6789999999999988774 22 22589999999888631
Q ss_pred ---C--CCccEEEEcccc
Q 022836 128 ---E--ASYDRIYSIEMF 140 (291)
Q Consensus 128 ---~--~~~D~i~~~~~l 140 (291)
. +++|.|+.+.-.
T Consensus 121 ~~~g~~~~vDgILfDLGV 138 (347)
T 3tka_A 121 AERDLIGKIDGILLDLGV 138 (347)
T ss_dssp HHTTCTTCEEEEEEECSC
T ss_pred HhcCCCCcccEEEECCcc
Confidence 1 258988887644
No 300
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.83 E-value=5e-05 Score=66.53 Aligned_cols=75 Identities=16% Similarity=0.186 Sum_probs=60.2
Q ss_pred HHHHHHHHHHcCCC------CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccc
Q 022836 49 KAMLELYCERSRLE------DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI 122 (291)
Q Consensus 49 ~~~~~~~~~~~~~~------~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~ 122 (291)
...++.+++.++.. ++..|||||.|.|.++..|++.....+|+++|+++..+...++.. . .++++++.+|+
T Consensus 38 ~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~--~~~l~ii~~D~ 114 (353)
T 1i4w_A 38 PTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E--GSPLQILKRDP 114 (353)
T ss_dssp HHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--TSSCEEECSCT
T ss_pred HHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--CCCEEEEECCc
Confidence 45566777776655 358999999999999999998643568999999999998887765 2 35899999999
Q ss_pred cCCc
Q 022836 123 STFE 126 (291)
Q Consensus 123 ~~~~ 126 (291)
.++.
T Consensus 115 l~~~ 118 (353)
T 1i4w_A 115 YDWS 118 (353)
T ss_dssp TCHH
T ss_pred cchh
Confidence 7653
No 301
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.81 E-value=5.3e-06 Score=69.97 Aligned_cols=102 Identities=12% Similarity=-0.004 Sum_probs=80.9
Q ss_pred CCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-----ccCCCccEEEEcc
Q 022836 64 GHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-----EMEASYDRIYSIE 138 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~D~i~~~~ 138 (291)
+..+||+-+|+|.+++.+.+. +.+++.+|.++..++..+++++. .+++.++..|.... +...+||+|++..
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred CCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 567999999999999999874 68999999999999888887754 24799999997552 2225799999999
Q ss_pred cccccccHHHHHHHHHh--ccccCeeEEEEeec
Q 022836 139 MFEHMKNYQNLLKKISK--WMKEDTLLFVHHFC 169 (291)
Q Consensus 139 ~l~~~~~~~~~l~~~~~--~LkpgG~l~~~~~~ 169 (291)
+++.-.+..++++.+.+ .+.|+|++++=-|.
T Consensus 168 PYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi 200 (283)
T 2oo3_A 168 SYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPV 200 (283)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CCCCCcHHHHHHHHHHHhCccCCCeEEEEEEec
Confidence 99765567777777765 45689998885543
No 302
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.73 E-value=7.4e-05 Score=62.84 Aligned_cols=59 Identities=17% Similarity=0.103 Sum_probs=48.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhC
Q 022836 50 AMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE 111 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 111 (291)
.++..+++... .++..|||..||+|..+..+.+. +.+++|+|+++..++.++++++..+
T Consensus 200 ~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 200 DLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 34555655543 67889999999999999998876 7899999999999999999987654
No 303
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.52 E-value=3e-05 Score=83.81 Aligned_cols=104 Identities=15% Similarity=0.091 Sum_probs=57.3
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCC-----CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-c-cCCCccEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYS-----NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-E-MEASYDRI 134 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~-~~~~~D~i 134 (291)
.+..+||+||.|+|..+..+.+... ..+++..|+|+...+.++++++.. ++.....|..+. . .++.||+|
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---di~~~~~d~~~~~~~~~~~ydlv 1315 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---HVTQGQWDPANPAPGSLGKADLL 1315 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---TEEEECCCSSCCCC-----CCEE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---ccccccccccccccCCCCceeEE
Confidence 4678999999999987776655432 237899999998888888776553 233322243332 1 12679999
Q ss_pred EEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 135 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 135 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
++.++++..++....+.+++++|||||.+++...
T Consensus 1316 ia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1316 VCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp EEECC--------------------CCEEEEEEC
T ss_pred EEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 9999998888899999999999999999988654
No 304
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.49 E-value=0.0026 Score=55.29 Aligned_cols=106 Identities=16% Similarity=0.147 Sum_probs=80.5
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhC---------------------CCCeEEEEc
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE---------------------LQNVEIIVA 120 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---------------------~~~v~~~~~ 120 (291)
.+...|+.||||.......+...+++.+++-||. |+.++.-++.+...+ .++..++.+
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 4568999999999999999987766788899998 888877777666541 147899999
Q ss_pred cccCCcc---------C-CCccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEeec
Q 022836 121 DISTFEM---------E-ASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 121 d~~~~~~---------~-~~~D~i~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
|+.+... . ....++++-.++.++ +...++++.+.+.. |+|.+++.+..
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 9987321 2 456889999999999 45667888888876 77776554443
No 305
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=97.13 E-value=0.0043 Score=51.71 Aligned_cols=114 Identities=10% Similarity=0.087 Sum_probs=76.5
Q ss_pred HHHHHcCCCCCCEEEEEcCCcchHHHHHHHH-------CCCCEEEEEc-----CCHH----------------------H
Q 022836 54 LYCERSRLEDGHTVLDVGCGWGSLSLYIAQK-------YSNCKITGIC-----NSKT----------------------Q 99 (291)
Q Consensus 54 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~-------~~~~~v~~vD-----~s~~----------------------~ 99 (291)
.+.+.+...+| .|+|+||-.|..+..++.. .+..+|+++| +.+. .
T Consensus 61 ~l~~~i~~vpG-~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~ 139 (257)
T 3tos_A 61 ALYRQVLDVPG-VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAY 139 (257)
T ss_dssp HHHHHTTTSCS-EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHH
T ss_pred HHHHHhhCCCC-eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHH
Confidence 45555444455 9999999999988887652 2457899999 3221 1
Q ss_pred HHHHHH---HHHHhCC--CCeEEEEccccCCcc------C-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 100 KEFIEE---QCRVLEL--QNVEIIVADISTFEM------E-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 100 ~~~a~~---~~~~~~~--~~v~~~~~d~~~~~~------~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
++...+ +.+..+. ++++++.+++.+..+ + .++|+|....-. -......++.+...|+|||++++..
T Consensus 140 l~~~l~~~~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 140 LKEVLDAHECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp HHHHHHHHHTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred HHHHHHHHhhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcC
Confidence 111111 1112233 579999999987421 2 469999987642 2445678999999999999999977
Q ss_pred ecc
Q 022836 168 FCH 170 (291)
Q Consensus 168 ~~~ 170 (291)
.+.
T Consensus 218 ~~~ 220 (257)
T 3tos_A 218 LDN 220 (257)
T ss_dssp TTC
T ss_pred CCC
Confidence 654
No 306
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.04 E-value=0.0023 Score=57.34 Aligned_cols=65 Identities=9% Similarity=0.105 Sum_probs=53.9
Q ss_pred CCCCCEEEEEcCCcchHHHHHH-HHCCC-CEEEEEcCCHHHHHHHHHHHHH---hCC-CCeEEEEccccCC
Q 022836 61 LEDGHTVLDVGCGWGSLSLYIA-QKYSN-CKITGICNSKTQKEFIEEQCRV---LEL-QNVEIIVADISTF 125 (291)
Q Consensus 61 ~~~~~~vLDiGcG~G~~~~~la-~~~~~-~~v~~vD~s~~~~~~a~~~~~~---~~~-~~v~~~~~d~~~~ 125 (291)
..++..|+|+|++.|..+..++ +..+. .+|+++|++|...+.++++++. ++. +++.++..-+.+-
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~~ 294 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGEN 294 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECSS
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEECC
Confidence 4688999999999999999988 45543 7999999999999999999987 345 6888887766653
No 307
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.03 E-value=0.01 Score=51.01 Aligned_cols=117 Identities=7% Similarity=0.068 Sum_probs=82.4
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC---CCeEEEEccccCCcc
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL---QNVEIIVADISTFEM 127 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~ 127 (291)
.++..++.........|++||||.=.....+.. .++.+++-|| .|..++..++.+...+. ++..++.+|+.+ ..
T Consensus 90 ~~d~~v~~~~~~g~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~ 166 (310)
T 2uyo_A 90 FFDTYFNNAVIDGIRQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DW 166 (310)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CH
T ss_pred HHHHHHHHHHHhCCCeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hH
Confidence 444444433222335799999998777555441 1247999999 59999988888875432 468899999987 21
Q ss_pred ---------C-CCccEEEEcccccccc--cHHHHHHHHHhccccCeeEEEEeecc
Q 022836 128 ---------E-ASYDRIYSIEMFEHMK--NYQNLLKKISKWMKEDTLLFVHHFCH 170 (291)
Q Consensus 128 ---------~-~~~D~i~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 170 (291)
. ...=++++-.++++++ +...+++.+...+.||+.+++.....
T Consensus 167 ~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 167 PPALRSAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp HHHHHHTTCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred HHHHHhccCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 1 2345778888999984 46679999999889999998876543
No 308
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.94 E-value=0.005 Score=53.37 Aligned_cols=73 Identities=15% Similarity=0.062 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC--CCccEEEEcccc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME--ASYDRIYSIEMF 140 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~--~~~D~i~~~~~l 140 (291)
.+.+++|+.||.|+++..+.+.. ...+.++|+++..++..+.+.... . .+|+.++... ..+|+|+...+.
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG-~~~v~~~e~d~~a~~t~~~N~~~~----~---~~Di~~~~~~~~~~~D~l~~gpPC 81 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCG-AECVYSNEWDKYAQEVYEMNFGEK----P---EGDITQVNEKTIPDHDILCAGFPC 81 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTT-CEEEEEECCCHHHHHHHHHHHSCC----C---BSCGGGSCGGGSCCCSEEEEECCC
T ss_pred CCCcEEEECCCcCHHHHHHHHCC-CeEEEEEeCCHHHHHHHHHHcCCC----C---cCCHHHcCHhhCCCCCEEEECCCC
Confidence 35799999999999999998762 335788999999888877775321 1 6888876543 569999998766
Q ss_pred ccc
Q 022836 141 EHM 143 (291)
Q Consensus 141 ~~~ 143 (291)
..+
T Consensus 82 Q~f 84 (327)
T 2c7p_A 82 QAF 84 (327)
T ss_dssp TTT
T ss_pred CCc
Confidence 544
No 309
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.92 E-value=0.0065 Score=53.73 Aligned_cols=72 Identities=17% Similarity=0.112 Sum_probs=56.3
Q ss_pred CEEEEEcCCcchHHHHHHHHCCCCE-EEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---------CCCccEE
Q 022836 65 HTVLDVGCGWGSLSLYIAQKYSNCK-ITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------EASYDRI 134 (291)
Q Consensus 65 ~~vLDiGcG~G~~~~~la~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---------~~~~D~i 134 (291)
.+++|+.||.|+++..+.+. |.+ |.++|+++..++..+.|. ++..++++|+.++.. ...+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 68999999999999999877 554 669999999877666553 356788899988642 2579999
Q ss_pred EEccccccc
Q 022836 135 YSIEMFEHM 143 (291)
Q Consensus 135 ~~~~~l~~~ 143 (291)
+...+...+
T Consensus 76 ~ggpPCQ~f 84 (376)
T 3g7u_A 76 IGGPPCQGF 84 (376)
T ss_dssp EECCCCCTT
T ss_pred EecCCCCCc
Confidence 998775444
No 310
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.77 E-value=0.0038 Score=54.47 Aligned_cols=95 Identities=18% Similarity=0.144 Sum_probs=67.1
Q ss_pred HHHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEE
Q 022836 56 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRI 134 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i 134 (291)
+......++.+||-+|+|. |..+..+++.. +++|+++|.+++..+.++ +.|.+.+ + .+...+. +.+|+|
T Consensus 169 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~----~lGa~~v--~-~~~~~~~--~~~D~v 238 (348)
T 3two_A 169 LKFSKVTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDAL----SMGVKHF--Y-TDPKQCK--EELDFI 238 (348)
T ss_dssp HHHTTCCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHH----HTTCSEE--E-SSGGGCC--SCEEEE
T ss_pred HHhcCCCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHH----hcCCCee--c-CCHHHHh--cCCCEE
Confidence 3455788999999999975 78888888776 889999999998776654 3554322 2 3332222 378998
Q ss_pred EEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 135 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 135 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+-...-. ..++...++|+|+|++++.
T Consensus 239 id~~g~~------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 239 ISTIPTH------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp EECCCSC------CCHHHHHTTEEEEEEEEEC
T ss_pred EECCCcH------HHHHHHHHHHhcCCEEEEE
Confidence 8643221 2466788899999998874
No 311
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.76 E-value=0.0065 Score=54.10 Aligned_cols=102 Identities=13% Similarity=0.039 Sum_probs=67.8
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-c------c
Q 022836 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-E------M 127 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~------~ 127 (291)
+.....++.+||-+|||. |.++..+++.. ++ +|+++|.+++.++.++ +.|. +.+..+-.+. . .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa---~~i~~~~~~~~~~~~~~~~ 250 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLS----DAGF---ETIDLRNSAPLRDQIDQIL 250 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHH----TTTC---EEEETTSSSCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHH----HcCC---cEEcCCCcchHHHHHHHHh
Confidence 556778999999999986 88888888766 67 9999999998766554 3443 2332211121 1 1
Q ss_pred C-CCccEEEEccccccc--------ccHHHHHHHHHhccccCeeEEEE
Q 022836 128 E-ASYDRIYSIEMFEHM--------KNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ~-~~~D~i~~~~~l~~~--------~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
. ..+|+|+-...-... ......++.+.++|++||++++.
T Consensus 251 ~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 251 GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 1 369999865432210 01234688888999999998764
No 312
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.75 E-value=0.0074 Score=53.12 Aligned_cols=99 Identities=12% Similarity=0.072 Sum_probs=67.0
Q ss_pred HHHHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------
Q 022836 55 YCERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ 126 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------ 126 (291)
+.+....+++.+||-+|||. |..+..+++.. ++ +|+++|.+++..+.+++ .|.+ .++..+-.++.
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~~Vi~~~~~~~~~~~a~~----lGa~--~vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQ----LGAT--HVINSKTQDPVAAIKEI 254 (371)
T ss_dssp HHTTTCCCTTCEEEEESCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHH----cCCC--EEecCCccCHHHHHHHh
Confidence 33556778999999999986 78888888766 66 79999999997766643 3542 12221111110
Q ss_pred cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 127 MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
..+.+|+|+-...- ...++...+.|+|+|++++.
T Consensus 255 ~~gg~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 255 TDGGVNFALESTGS------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp TTSCEEEEEECSCC------HHHHHHHHHTEEEEEEEEEC
T ss_pred cCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEe
Confidence 01368998864321 35678889999999998764
No 313
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.74 E-value=0.003 Score=56.27 Aligned_cols=102 Identities=14% Similarity=0.082 Sum_probs=68.8
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC-Cc------c
Q 022836 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FE------M 127 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~------~ 127 (291)
......++.+||-+|||. |.++..+++.. ++ +|+++|.+++.++.++ +.|. +.+...-.+ +. .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~-Ga~~Vi~~~~~~~~~~~a~----~lGa---~~i~~~~~~~~~~~v~~~t 250 (398)
T 1kol_A 179 VTAGVGPGSTVYVAGAGPVGLAAAASARLL-GAAVVIVGDLNPARLAHAK----AQGF---EIADLSLDTPLHEQIAALL 250 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHH----HTTC---EEEETTSSSCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCcHHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHH----HcCC---cEEccCCcchHHHHHHHHh
Confidence 456778999999999875 88888888876 66 7999999998766664 3454 222211111 10 1
Q ss_pred C-CCccEEEEccccc---------ccccHHHHHHHHHhccccCeeEEEE
Q 022836 128 E-ASYDRIYSIEMFE---------HMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ~-~~~D~i~~~~~l~---------~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
. ..+|+|+-.-.-. +.++....++...++|++||++++.
T Consensus 251 ~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 251 GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 1 3699998654321 1233445788899999999998764
No 314
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.73 E-value=0.0021 Score=56.15 Aligned_cols=75 Identities=15% Similarity=0.193 Sum_probs=55.4
Q ss_pred CCEEEEEcCCcchHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC----CCccEEEEcc
Q 022836 64 GHTVLDVGCGWGSLSLYIAQKYS-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----ASYDRIYSIE 138 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~----~~~D~i~~~~ 138 (291)
..+|+|+.||.|+++..+.+..- ...|.++|+++.+++..+.|+. +..++.+|+.++... ..+|+|+...
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 35899999999999999987721 1368999999998888777652 345778999887532 2699999988
Q ss_pred ccccc
Q 022836 139 MFEHM 143 (291)
Q Consensus 139 ~l~~~ 143 (291)
+...+
T Consensus 77 PCq~f 81 (343)
T 1g55_A 77 PCQPF 81 (343)
T ss_dssp C----
T ss_pred CCcch
Confidence 75443
No 315
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.69 E-value=0.013 Score=51.22 Aligned_cols=97 Identities=13% Similarity=0.106 Sum_probs=65.9
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcc---ccCCc-----
Q 022836 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVAD---ISTFE----- 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d---~~~~~----- 126 (291)
+.....++.+||-+|+|. |..+..+++.. ++ +|+++|.+++..+.++ +.|.+ .++..+ -.+..
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~--~vi~~~~~~~~~~~~~i~~ 237 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAK----EIGAD--LVLQISKESPQEIARKVEG 237 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHH----HTTCS--EEEECSSCCHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHH----HhCCC--EEEcCcccccchHHHHHHH
Confidence 456778999999999985 78888888876 77 9999999998766554 34543 222211 01110
Q ss_pred -cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 127 -MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 -~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
....+|+|+-...- ...++...++|+|+|++++.
T Consensus 238 ~~~~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 238 QLGCKPEVTIECTGA------EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHTSCCSEEEECSCC------HHHHHHHHHHSCTTCEEEEC
T ss_pred HhCCCCCEEEECCCC------hHHHHHHHHHhcCCCEEEEE
Confidence 01468998864321 34577788999999998764
No 316
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.64 E-value=0.014 Score=50.62 Aligned_cols=98 Identities=8% Similarity=0.093 Sum_probs=67.2
Q ss_pred HHHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-----CC
Q 022836 56 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----EA 129 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~~ 129 (291)
++.....++.+||-+|+|. |..+..+++.. +++|+++|.+++..+.+++ .|.+. .+...-.++.. .+
T Consensus 159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~--~i~~~~~~~~~~~~~~~g 231 (340)
T 3s2e_A 159 LKVTDTRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARR----LGAEV--AVNARDTDPAAWLQKEIG 231 (340)
T ss_dssp HHTTTCCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----TTCSE--EEETTTSCHHHHHHHHHS
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHH----cCCCE--EEeCCCcCHHHHHHHhCC
Confidence 3555778999999999975 88888888876 8899999999997766543 45421 22211111110 13
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 130 ~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
.+|+|+-... ....++.+.+.|+|+|++++.
T Consensus 232 ~~d~vid~~g------~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 232 GAHGVLVTAV------SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp SEEEEEESSC------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEEeCC------CHHHHHHHHHHhccCCEEEEe
Confidence 6888876422 245678888999999998764
No 317
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.59 E-value=0.00045 Score=59.94 Aligned_cols=71 Identities=13% Similarity=0.020 Sum_probs=52.6
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC
Q 022836 51 MLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF 125 (291)
Q Consensus 51 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 125 (291)
++..+++.. ..++..|||..||+|..+....+. +.+.+|+|+++..++.+++++...+. ....+..|+.++
T Consensus 241 l~~~~i~~~-~~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~r~~~~~~-~~~~~~~~~~~i 311 (323)
T 1boo_A 241 LPEFFIRML-TEPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAFRFLDNNI-SEEKITDIYNRI 311 (323)
T ss_dssp HHHHHHHHH-CCTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHGGGSCSCS-CHHHHHHHHHHH
T ss_pred HHHHHHHHh-CCCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHHHHHhccc-chHHHHHHHHHH
Confidence 444555443 467889999999999999988766 78999999999999999888765543 233444444443
No 318
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.54 E-value=0.012 Score=50.86 Aligned_cols=71 Identities=18% Similarity=0.152 Sum_probs=54.5
Q ss_pred CEEEEEcCCcchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC--CCccEEEEccccc
Q 022836 65 HTVLDVGCGWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME--ASYDRIYSIEMFE 141 (291)
Q Consensus 65 ~~vLDiGcG~G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~--~~~D~i~~~~~l~ 141 (291)
++|+|+-||.|+++.-+.+. |. .+.++|+++...+..+.|. .-.++.+|+.++... ...|+++...+..
T Consensus 1 mkvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~------~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ 72 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNH------SAKLIKGDISKISSDEFPKCDGIIGGPPSQ 72 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHC------CSEEEESCGGGCCGGGSCCCSEEECCCCGG
T ss_pred CeEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHC------CCCcccCChhhCCHhhCCcccEEEecCCCC
Confidence 58999999999999988765 55 4669999999777666553 235778999987654 6799999877654
Q ss_pred cc
Q 022836 142 HM 143 (291)
Q Consensus 142 ~~ 143 (291)
.+
T Consensus 73 ~f 74 (331)
T 3ubt_Y 73 SW 74 (331)
T ss_dssp GT
T ss_pred Cc
Confidence 43
No 319
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.43 E-value=0.013 Score=51.40 Aligned_cols=100 Identities=15% Similarity=0.040 Sum_probs=68.2
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCCE-EEEEcCCHHHHHHHHHHHHHhCCCCeEEEE-----ccccC----C
Q 022836 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCK-ITGICNSKTQKEFIEEQCRVLELQNVEIIV-----ADIST----F 125 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~-----~d~~~----~ 125 (291)
+.....++.+||=+|+|. |..+..+++.. +++ |+++|.+++..+.+++. . ..-+.+.. .|+.+ .
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-~---~~~~~~~~~~~~~~~~~~~v~~~ 247 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI-C---PEVVTHKVERLSAEESAKKIVES 247 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH-C---TTCEEEECCSCCHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-c---hhcccccccccchHHHHHHHHHH
Confidence 556788999999999974 78888888876 776 99999999988877754 1 11223321 11111 0
Q ss_pred ccCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 126 EMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 126 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
.....+|+|+-.-. -...++.+.++|++||++++..
T Consensus 248 t~g~g~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 248 FGGIEPAVALECTG------VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp TSSCCCSEEEECSC------CHHHHHHHHHHSCTTCEEEECC
T ss_pred hCCCCCCEEEECCC------ChHHHHHHHHHhcCCCEEEEEc
Confidence 11257999986432 1346778889999999988743
No 320
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.41 E-value=0.017 Score=50.33 Aligned_cols=97 Identities=18% Similarity=0.141 Sum_probs=65.7
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcc-ccCCc-------c
Q 022836 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVAD-ISTFE-------M 127 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d-~~~~~-------~ 127 (291)
+.....++.+||-+|+|. |..+..+++.. +++|+++|.+++..+.++ ..|.+ ..+..+ -.+.. .
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~----~lGa~--~~~~~~~~~~~~~~i~~~~~ 234 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAK----NCGAD--VTLVVDPAKEEESSIIERIR 234 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHH----HTTCS--EEEECCTTTSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHH----HhCCC--EEEcCcccccHHHHHHHHhc
Confidence 455778999999999874 77788888776 788999999998766554 34543 122211 01110 1
Q ss_pred ---CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 128 ---EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ---~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
...+|+|+-...- ...++...+.|+|+|++++.
T Consensus 235 ~~~g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 235 SAIGDLPNVTIDCSGN------EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHSSSCCSEEEECSCC------HHHHHHHHHHSCTTCEEEEC
T ss_pred cccCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEE
Confidence 2368998865322 34577788999999998764
No 321
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.40 E-value=0.031 Score=49.10 Aligned_cols=97 Identities=16% Similarity=0.210 Sum_probs=66.6
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEE---ccccCC------
Q 022836 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIV---ADISTF------ 125 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~------ 125 (291)
+.....++.+||-+|+|. |..+..+++.. ++ +|+++|.+++..+.+++ .|.+. .+. .|+.+.
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~----lGa~~--vi~~~~~~~~~~i~~~~~ 248 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLA-GATTVILSTRQATKRRLAEE----VGATA--TVDPSAGDVVEAIAGPVG 248 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHH----HTCSE--EECTTSSCHHHHHHSTTS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----cCCCE--EECCCCcCHHHHHHhhhh
Confidence 566788999999999975 77888888876 76 99999999987666554 45421 121 111110
Q ss_pred ccCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 126 EMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 126 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
...+.+|+|+-... ....++.+.++|++||++++.
T Consensus 249 ~~~gg~Dvvid~~G------~~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 249 LVPGGVDVVIECAG------VAETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp SSTTCEEEEEECSC------CHHHHHHHHHHEEEEEEEEEC
T ss_pred ccCCCCCEEEECCC------CHHHHHHHHHHhccCCEEEEE
Confidence 01147899886422 135678888999999998774
No 322
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.35 E-value=0.031 Score=44.28 Aligned_cols=94 Identities=17% Similarity=0.229 Sum_probs=61.7
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--------
Q 022836 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------- 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-------- 126 (291)
+.....++.+||..|+ |.|.....++... +++|+++|.+++..+.++ ..|.+ . . .|..+..
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~----~~g~~-~-~--~d~~~~~~~~~~~~~ 102 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLS----RLGVE-Y-V--GDSRSVDFADEILEL 102 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHH----TTCCS-E-E--EETTCSTHHHHHHHH
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH----HcCCC-E-E--eeCCcHHHHHHHHHH
Confidence 3456788999999994 4566666666554 789999999988665443 23432 1 1 1322211
Q ss_pred c-CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 127 M-EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 ~-~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
. ...+|+++.+.. ...++.+.+.|+|+|++++.
T Consensus 103 ~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 103 TDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp TTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEEC
T ss_pred hCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEE
Confidence 1 135899986532 24678888999999998764
No 323
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.27 E-value=0.014 Score=49.89 Aligned_cols=130 Identities=16% Similarity=0.182 Sum_probs=72.8
Q ss_pred cccCCCCCCHHHHHHHHHHH--HHHHcCCCCCCEEEEEcCCcchHHHHHH----HHCCCCE--EEEEcCCH--------H
Q 022836 35 CYFSDASKTLEDAEKAMLEL--YCERSRLEDGHTVLDVGCGWGSLSLYIA----QKYSNCK--ITGICNSK--------T 98 (291)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~vLDiGcG~G~~~~~la----~~~~~~~--v~~vD~s~--------~ 98 (291)
.|++.....+.+++...+.- +.++....+.-+|||+|-|+|....... +..|..+ ++.+|..+ .
T Consensus 66 ~YhS~~~GAl~Es~hVFi~~~~L~~r~~~~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~ 145 (308)
T 3vyw_A 66 PYHSQTAGAIRESLYKFVRPSRILEKAKERKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPE 145 (308)
T ss_dssp ESSCTTTCHHHHHHHHTHHHHTHHHHHHHCSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCT
T ss_pred ccCCCCCcHHHHHHHHHhccCCchHHhcCCCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchH
Confidence 34443334466765554432 2233323455789999999998654332 2345554 45666321 1
Q ss_pred HHHHHHH-HHHHhC---CCC--eEEEEccccCCcc--C-CCccEEEEcccccccccH----HHHHHHHHhccccCeeEEE
Q 022836 99 QKEFIEE-QCRVLE---LQN--VEIIVADISTFEM--E-ASYDRIYSIEMFEHMKNY----QNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 99 ~~~~a~~-~~~~~~---~~~--v~~~~~d~~~~~~--~-~~~D~i~~~~~l~~~~~~----~~~l~~~~~~LkpgG~l~~ 165 (291)
......+ ...... ..+ +++..+|+.+... . .++|+|+..+ |..-.++ ..+++.+.++++|||++.-
T Consensus 146 ~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 146 PYREIHEFLLERVPEYEGERLSLKVLLGDARKRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp TSHHHHHHHHHHCSEEECSSEEEEEEESCHHHHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred hHHHHHHHHHHhCccccCCcEEEEEEechHHHHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 1111112 122111 123 5677889877432 2 4799999865 2222222 5799999999999998764
No 324
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.22 E-value=0.011 Score=52.03 Aligned_cols=95 Identities=18% Similarity=0.282 Sum_probs=64.7
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc---c-ccCCccCCCc
Q 022836 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA---D-ISTFEMEASY 131 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~---d-~~~~~~~~~~ 131 (291)
.....+++.+||-+|+|. |..+..+++.. +++|++++.+++.++.+++ .|.+. ++.. | ..... ..+
T Consensus 188 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~----lGa~~--vi~~~~~~~~~~~~--~g~ 258 (369)
T 1uuf_A 188 RHWQAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKA----LGADE--VVNSRNADEMAAHL--KSF 258 (369)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH----HTCSE--EEETTCHHHHHTTT--TCE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCcE--EeccccHHHHHHhh--cCC
Confidence 445778999999999984 77888888776 8899999999998776654 45421 2211 1 11111 568
Q ss_pred cEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 132 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 132 D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
|+|+-...-. ..++...+.|+|+|.++..
T Consensus 259 Dvvid~~g~~------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 259 DFILNTVAAP------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEEEECCSSC------CCHHHHHTTEEEEEEEEEC
T ss_pred CEEEECCCCH------HHHHHHHHHhccCCEEEEe
Confidence 9988653321 2356678899999998763
No 325
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.13 E-value=0.015 Score=50.83 Aligned_cols=99 Identities=17% Similarity=0.114 Sum_probs=66.8
Q ss_pred HHHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-------
Q 022836 56 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------- 126 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------- 126 (291)
++.....++.+||-+|+|. |..+..+++.. ++ +|+++|.+++.++.+++ .|.+ .++..+-.++.
T Consensus 159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~----lGa~--~vi~~~~~~~~~~v~~~t 231 (352)
T 3fpc_A 159 AELANIKLGDTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALE----YGAT--DIINYKNGDIVEQILKAT 231 (352)
T ss_dssp HHHTTCCTTCCEEEECCSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHHH----HTCC--EEECGGGSCHHHHHHHHT
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHH----hCCc--eEEcCCCcCHHHHHHHHc
Confidence 3667788999999999875 77888888765 76 89999999987666554 4542 12221111111
Q ss_pred cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 127 MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 127 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
....+|+|+-...- ...++.+.+.|+|||++++..
T Consensus 232 ~g~g~D~v~d~~g~------~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 232 DGKGVDKVVIAGGD------VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TTCCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEec
Confidence 11369999864222 245777888999999987654
No 326
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.13 E-value=0.026 Score=48.70 Aligned_cols=96 Identities=21% Similarity=0.277 Sum_probs=64.4
Q ss_pred HHHHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC---Cc---
Q 022836 55 YCERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST---FE--- 126 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~--- 126 (291)
+.+.....++.+||-.|| |.|..+..+++.. +++|+++|.+++..+.++ ..|.+ .. .|..+ ..
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~----~~g~~-~~---~d~~~~~~~~~~~ 207 (333)
T 1v3u_A 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLK----QIGFD-AA---FNYKTVNSLEEAL 207 (333)
T ss_dssp HHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HTTCS-EE---EETTSCSCHHHHH
T ss_pred HHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH----hcCCc-EE---EecCCHHHHHHHH
Confidence 334556788999999998 5677777777665 889999999988766552 23432 11 23322 10
Q ss_pred ---cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 127 ---MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 ---~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
..+.+|+++.+..- ..++...++|++||++++.
T Consensus 208 ~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 208 KKASPDGYDCYFDNVGG-------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp HHHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEEC
T ss_pred HHHhCCCCeEEEECCCh-------HHHHHHHHHHhcCCEEEEE
Confidence 01468998876432 3477888999999998764
No 327
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.12 E-value=0.011 Score=51.07 Aligned_cols=60 Identities=17% Similarity=-0.011 Sum_probs=46.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCH---HHHHHHHHHHHHhC
Q 022836 49 KAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSK---TQKEFIEEQCRVLE 111 (291)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~---~~~~~a~~~~~~~~ 111 (291)
..++..++... ..++..|||.-||+|..+....+. +.+.+|+|+++ ..++.+++++...+
T Consensus 229 ~~l~~~~i~~~-~~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 229 AAVIERLVRAL-SHPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHH-SCTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHh-CCCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 34455555544 367889999999999999998887 78999999999 99999988876544
No 328
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.12 E-value=0.016 Score=51.10 Aligned_cols=95 Identities=11% Similarity=0.099 Sum_probs=65.2
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC----Cc----
Q 022836 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST----FE---- 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~----~~---- 126 (291)
+.....++.+||-+|+|. |..+..+++.. ++ +|+++|.+++.++.++ +.|.+. ++ |..+ +.
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~--vi--~~~~~~~~~~~~~~ 256 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAK----VFGATD--FV--NPNDHSEPISQVLS 256 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHH----HTTCCE--EE--CGGGCSSCHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHH----HhCCce--EE--eccccchhHHHHHH
Confidence 445678899999999874 77888888776 77 8999999999776654 345421 22 2221 11
Q ss_pred --cCCCccEEEEcccccccccHHHHHHHHHhccccC-eeEEEE
Q 022836 127 --MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVH 166 (291)
Q Consensus 127 --~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~ 166 (291)
..+.+|+|+-...- ...++.+.++|+++ |++++.
T Consensus 257 ~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 257 KMTNGGVDFSLECVGN------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HHHTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhCCCCCEEEECCCC------HHHHHHHHHHhhcCCcEEEEE
Confidence 01368998864322 35678888999999 998764
No 329
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.06 E-value=0.023 Score=48.35 Aligned_cols=74 Identities=11% Similarity=0.028 Sum_probs=55.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHCCCCE---EEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-----CCccE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKYSNCK---ITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-----ASYDR 133 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-----~~~D~ 133 (291)
....+++|+-||.|+++..+.+. |.+ |.++|+++...+..+.+. +...+..+|+.++... ..+|+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a--G~~~~~v~a~E~d~~a~~ty~~N~-----~~~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL--GIQVDRYIASEVCEDSITVGMVRH-----QGKIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT--TBCEEEEEEECCCHHHHHHHHHHT-----TTCEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC--CCccceEEEEECCHHHHHHHHHhC-----CCCceeCCChHHccHHHhcccCCcCE
Confidence 45679999999999999988876 544 589999999776655543 2456788999887532 36999
Q ss_pred EEEcccccc
Q 022836 134 IYSIEMFEH 142 (291)
Q Consensus 134 i~~~~~l~~ 142 (291)
++...+...
T Consensus 87 l~ggpPCQ~ 95 (295)
T 2qrv_A 87 VIGGSPCND 95 (295)
T ss_dssp EEECCCCGG
T ss_pred EEecCCCcc
Confidence 998765443
No 330
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.06 E-value=0.014 Score=50.83 Aligned_cols=96 Identities=11% Similarity=0.135 Sum_probs=65.3
Q ss_pred CCCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcc--ccCC----ccCCCcc
Q 022836 60 RLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVAD--ISTF----EMEASYD 132 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d--~~~~----~~~~~~D 132 (291)
...++.+||-+|+|. |..+..+++...+.+|+++|.+++..+.++ +.|.+. ++..+ ..+. .....+|
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~----~lGa~~--~i~~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAR----EVGADA--AVKSGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH----HTTCSE--EEECSTTHHHHHHHHHGGGCEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCCCE--EEcCCCcHHHHHHHHhCCCCCe
Confidence 567899999999975 778888887654789999999999766654 345432 22111 1110 0113789
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 133 ~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
+|+-.-.- ...++.+.+.|+++|++++..
T Consensus 242 ~v~d~~G~------~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 242 AVFDFVGA------QSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEESSCC------HHHHHHHHHHEEEEEEEEECS
T ss_pred EEEECCCC------HHHHHHHHHHHhcCCEEEEEC
Confidence 88864322 346788899999999988753
No 331
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.05 E-value=0.014 Score=51.28 Aligned_cols=98 Identities=11% Similarity=0.025 Sum_probs=65.5
Q ss_pred HHHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccc--cCCc-----
Q 022836 56 CERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADI--STFE----- 126 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~--~~~~----- 126 (291)
.+.....++.+||-+|+|. |..+..+++.. ++ +|+++|.+++..+.++ +.|.+. ++..+- .++.
T Consensus 184 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~--vi~~~~~~~~~~~~i~~ 256 (373)
T 1p0f_A 184 VNTAKVTPGSTCAVFGLGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAI----ELGATE--CLNPKDYDKPIYEVICE 256 (373)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHH----HTTCSE--EECGGGCSSCHHHHHHH
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHH----HcCCcE--EEecccccchHHHHHHH
Confidence 3455678899999999874 77788888766 66 8999999998776654 345421 221110 1111
Q ss_pred -cCCCccEEEEcccccccccHHHHHHHHHhccccC-eeEEEE
Q 022836 127 -MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVH 166 (291)
Q Consensus 127 -~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~ 166 (291)
..+.+|+|+-.-.- ...++...++|+++ |++++.
T Consensus 257 ~t~gg~Dvvid~~g~------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 257 KTNGGVDYAVECAGR------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp HTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HhCCCCCEEEECCCC------HHHHHHHHHHHhcCCCEEEEE
Confidence 01368998864321 35678888999999 998764
No 332
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.01 E-value=0.019 Score=50.58 Aligned_cols=95 Identities=13% Similarity=0.047 Sum_probs=65.1
Q ss_pred HHcCCCCCCEEEEEcCC-cchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC----Cc----
Q 022836 57 ERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST----FE---- 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~----~~---- 126 (291)
+.....++.+||-+|+| .|..+..+++.. ++ +|+++|.+++..+.++ +.|.+. ++ |..+ +.
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~--vi--~~~~~~~~~~~~v~ 259 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAK----ALGATD--CL--NPRELDKPVQDVIT 259 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHH----HTTCSE--EE--CGGGCSSCHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHH----HhCCcE--EE--ccccccchHHHHHH
Confidence 45567889999999987 477888888776 77 8999999998776654 345421 22 2211 11
Q ss_pred --cCCCccEEEEcccccccccHHHHHHHHHhccccC-eeEEEE
Q 022836 127 --MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVH 166 (291)
Q Consensus 127 --~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~ 166 (291)
..+.+|+|+-...- ...++.+.+.|+++ |++++.
T Consensus 260 ~~~~~g~Dvvid~~G~------~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 260 ELTAGGVDYSLDCAGT------AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp HHHTSCBSEEEESSCC------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhCCCccEEEECCCC------HHHHHHHHHHhhcCCCEEEEE
Confidence 01368998864221 35678888999999 998764
No 333
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.98 E-value=0.023 Score=48.67 Aligned_cols=92 Identities=13% Similarity=0.131 Sum_probs=62.0
Q ss_pred HHcCCCCCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEE
Q 022836 57 ERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIY 135 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~ 135 (291)
+....+++.+||=+|+| .|..+..+++.. +++|++++ +++..+.+++ .|.+ .+..|...+ ...+|+|+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~----lGa~---~v~~d~~~v--~~g~Dvv~ 204 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAK----RGVR---HLYREPSQV--TQKYFAIF 204 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHH----HTEE---EEESSGGGC--CSCEEEEE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHH----cCCC---EEEcCHHHh--CCCccEEE
Confidence 55677899999999996 478888888776 78999999 8887766654 4432 222242222 46789887
Q ss_pred EcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 136 SIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 136 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
-.-.- ..+....++|+|+|+++..
T Consensus 205 d~~g~-------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 205 DAVNS-------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp CC--------------TTGGGEEEEEEEEEE
T ss_pred ECCCc-------hhHHHHHHHhcCCCEEEEE
Confidence 53221 1235577899999998775
No 334
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.91 E-value=0.051 Score=47.08 Aligned_cols=101 Identities=11% Similarity=0.015 Sum_probs=64.7
Q ss_pred HHHHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-------c
Q 022836 55 YCERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-------E 126 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-------~ 126 (291)
........++.+||=.|+|. |.++..+++......++++|.+++.++.++ +.|.+ ..+...-.+. .
T Consensus 152 ~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~----~lGa~--~~i~~~~~~~~~~~~~~~ 225 (346)
T 4a2c_A 152 AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAK----SFGAM--QTFNSSEMSAPQMQSVLR 225 (346)
T ss_dssp HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCS--EEEETTTSCHHHHHHHHG
T ss_pred HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHH----HcCCe--EEEeCCCCCHHHHHHhhc
Confidence 34556778999999999974 556777777763346789999998666554 45542 2222111111 0
Q ss_pred cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 127 MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 127 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
....+|+|+.... ....++...++|++||.+++..
T Consensus 226 ~~~g~d~v~d~~G------~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 226 ELRFNQLILETAG------VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp GGCSSEEEEECSC------SHHHHHHHHHHCCTTCEEEECC
T ss_pred ccCCccccccccc------ccchhhhhhheecCCeEEEEEe
Confidence 1145787765422 2456778889999999987743
No 335
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.90 E-value=0.018 Score=50.58 Aligned_cols=97 Identities=14% Similarity=0.154 Sum_probs=65.0
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc-cc-cCCc------
Q 022836 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVA-DI-STFE------ 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~-d~-~~~~------ 126 (291)
+....+++.+||-+|+|. |.++..+++.. ++ +|+++|.+++..+.+++ .|.+. ++.. +. .++.
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~-Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~~~v~~~ 256 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKE----FGATE--CINPQDFSKPIQEVLIEM 256 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHH----HTCSE--EECGGGCSSCHHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHH----cCCce--EeccccccccHHHHHHHH
Confidence 455678899999999874 77788888765 66 89999999997776653 45421 2211 10 1111
Q ss_pred cCCCccEEEEcccccccccHHHHHHHHHhccccC-eeEEEE
Q 022836 127 MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVH 166 (291)
Q Consensus 127 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~ 166 (291)
..+.+|+|+-...- ...++.+.+.|+++ |++++.
T Consensus 257 ~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 257 TDGGVDYSFECIGN------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp TTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEEC
T ss_pred hCCCCCEEEECCCc------HHHHHHHHHhhccCCcEEEEE
Confidence 01368998864321 34678888999999 998764
No 336
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.88 E-value=0.028 Score=49.29 Aligned_cols=98 Identities=19% Similarity=0.109 Sum_probs=66.5
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-------cC
Q 022836 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------ME 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-------~~ 128 (291)
+....+++.+||-+|+|. |..+..+++.. +++|+++|.+++.++.+++ .|.+ .++..+-.++. ..
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~--~vi~~~~~~~~~~v~~~~~g 255 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFA----LGAD--HGINRLEEDWVERVYALTGD 255 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHH----cCCC--EEEcCCcccHHHHHHHHhCC
Confidence 456678999999999875 77888888776 8899999999987766543 4542 12222211211 11
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
..+|+|+-...- ..++...++|+|+|.+++...
T Consensus 256 ~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 256 RGADHILEIAGG-------AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp CCEEEEEEETTS-------SCHHHHHHHEEEEEEEEEECC
T ss_pred CCceEEEECCCh-------HHHHHHHHHhhcCCEEEEEec
Confidence 379999865431 246667789999999887543
No 337
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.82 E-value=0.01 Score=51.39 Aligned_cols=102 Identities=16% Similarity=0.198 Sum_probs=67.5
Q ss_pred HHHHHHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----
Q 022836 53 ELYCERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE---- 126 (291)
Q Consensus 53 ~~~~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---- 126 (291)
..+.+....+++.+||-.|+ |.|..+..+++.. +++|++++.+++..+.+. +..|.+ ..+...-.++.
T Consensus 139 ~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~---~~~g~~--~~~~~~~~~~~~~~~ 212 (336)
T 4b7c_A 139 FALLDVGQPKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLV---EELGFD--GAIDYKNEDLAAGLK 212 (336)
T ss_dssp HHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH---HTTCCS--EEEETTTSCHHHHHH
T ss_pred HHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH---HHcCCC--EEEECCCHHHHHHHH
Confidence 33445667889999999998 4678888888776 889999999998665552 233442 11211111111
Q ss_pred --cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 127 --MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 127 --~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
..+.+|+|+.+..- ..++.+.+.|+++|++++..
T Consensus 213 ~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 213 RECPKGIDVFFDNVGG-------EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp HHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECC
T ss_pred HhcCCCceEEEECCCc-------chHHHHHHHHhhCCEEEEEe
Confidence 11468988864321 36788889999999987743
No 338
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.81 E-value=0.084 Score=45.65 Aligned_cols=95 Identities=9% Similarity=0.090 Sum_probs=64.8
Q ss_pred HHcCCCCCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-----C--
Q 022836 57 ERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E-- 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~-- 128 (291)
......++.+||-+|+| .|..+..+++.. +++|++++.+++.++.++ +.|.+ .. .|..+... .
T Consensus 158 ~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~----~lGa~--~~--~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 158 KVTGAKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAK----ELGAD--LV--VNPLKEDAAKFMKEKV 228 (339)
T ss_dssp HHHTCCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHH----HTTCS--EE--ECTTTSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH----HCCCC--EE--ecCCCccHHHHHHHHh
Confidence 34467889999999986 477777777766 789999999998776654 34442 11 23322110 0
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
..+|+|+..... ...++...+.|+++|++++.
T Consensus 229 ~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 229 GGVHAAVVTAVS------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp SSEEEEEESSCC------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCCC------HHHHHHHHHHhhcCCEEEEe
Confidence 368988865322 34677888999999998764
No 339
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.77 E-value=0.059 Score=47.34 Aligned_cols=95 Identities=12% Similarity=0.113 Sum_probs=64.8
Q ss_pred HHcCCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC----Cc----
Q 022836 57 ERSRLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST----FE---- 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~----~~---- 126 (291)
+.....++.+||-+|+|. |..+..+++.. ++ +|+++|.+++..+.++ +.|.+ .++ |..+ +.
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~--~vi--~~~~~~~~~~~~~~ 255 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAK----EVGAT--ECV--NPQDYKKPIQEVLT 255 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHH----HTTCS--EEE--CGGGCSSCHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHH----HhCCc--eEe--cccccchhHHHHHH
Confidence 445678899999999874 77888888776 77 8999999998776654 34542 122 2211 11
Q ss_pred --cCCCccEEEEcccccccccHHHHHHHHHhccccC-eeEEEE
Q 022836 127 --MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVH 166 (291)
Q Consensus 127 --~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~ 166 (291)
..+.+|+|+-...- ...++...++|+++ |++++.
T Consensus 256 ~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 256 EMSNGGVDFSFEVIGR------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp HHTTSCBSEEEECSCC------HHHHHHHHHHBCTTTCEEEEC
T ss_pred HHhCCCCcEEEECCCC------HHHHHHHHHHhhcCCcEEEEe
Confidence 01368998864321 34677888999999 998764
No 340
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.76 E-value=0.024 Score=49.34 Aligned_cols=95 Identities=15% Similarity=0.247 Sum_probs=63.6
Q ss_pred HHcCCC------CCCEEEEE-cCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--
Q 022836 57 ERSRLE------DGHTVLDV-GCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-- 126 (291)
Q Consensus 57 ~~~~~~------~~~~vLDi-GcG-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 126 (291)
+..... ++.+||=+ |+| .|..+..+++.. +++|++++.+++.++.+++ .|.+. ++..+ .++.
T Consensus 138 ~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~-~~~~~~ 209 (346)
T 3fbg_A 138 DVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKK----MGADI--VLNHK-ESLLNQ 209 (346)
T ss_dssp TTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHH----HTCSE--EECTT-SCHHHH
T ss_pred HhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCcE--EEECC-ccHHHH
Confidence 445566 78999999 454 577888888766 8899999999987766654 45421 11111 1110
Q ss_pred ----cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEE
Q 022836 127 ----MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 127 ----~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 165 (291)
....+|+|+-.. .....++.+.++|+++|.++.
T Consensus 210 ~~~~~~~g~Dvv~d~~------g~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 210 FKTQGIELVDYVFCTF------NTDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp HHHHTCCCEEEEEESS------CHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHhCCCCccEEEECC------CchHHHHHHHHHhccCCEEEE
Confidence 114689888642 234567888899999999865
No 341
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.74 E-value=0.016 Score=51.14 Aligned_cols=100 Identities=12% Similarity=0.119 Sum_probs=66.6
Q ss_pred HHHHcCCCCCCEEEEEcCC-cchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcc--ccCCc----
Q 022836 55 YCERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVAD--ISTFE---- 126 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d--~~~~~---- 126 (291)
+.+....+++.+||-+|+| .|..+..+++.. ++ +|+++|.+++.++.++ +.|.+. ++... -.++.
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~--vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTA-GASRIIGIDIDSKKYETAK----KFGVNE--FVNPKDHDKPIQEVIV 257 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHH-TCSCEEEECSCTTHHHHHH----TTTCCE--EECGGGCSSCHHHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHH----HcCCcE--EEccccCchhHHHHHH
Confidence 3455677899999999997 477888888766 66 8999999998766554 345421 22111 01110
Q ss_pred --cCCCccEEEEcccccccccHHHHHHHHHhccccC-eeEEEEe
Q 022836 127 --MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKED-TLLFVHH 167 (291)
Q Consensus 127 --~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 167 (291)
..+.+|+|+-... ....++...+.|++| |++++..
T Consensus 258 ~~~~gg~D~vid~~g------~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 258 DLTDGGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp HHTTSCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred HhcCCCCCEEEECCC------CHHHHHHHHHHhhccCCEEEEEc
Confidence 1146999886422 245678889999997 9987743
No 342
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.73 E-value=0.032 Score=48.38 Aligned_cols=99 Identities=13% Similarity=0.130 Sum_probs=64.6
Q ss_pred HHHHcCCCCCCEEEEEcCC--cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------
Q 022836 55 YCERSRLEDGHTVLDVGCG--WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ 126 (291)
Q Consensus 55 ~~~~~~~~~~~~vLDiGcG--~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------ 126 (291)
+.+....+++.+||-+|+| .|..+..+++.. +++|+++|.+++.++.+++ .|.+ ..+...-.++.
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lga~--~~~~~~~~~~~~~~~~~ 208 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLR----LGAA--YVIDTSTAPLYETVMEL 208 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH----HTCS--EEEETTTSCHHHHHHHH
T ss_pred HHHhcccCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----CCCc--EEEeCCcccHHHHHHHH
Confidence 3455677899999999987 677888888765 8899999999987776654 3442 12211111111
Q ss_pred -cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 127 -MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 127 -~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
....+|+|+.+..- ... ....++|+++|++++..
T Consensus 209 ~~~~g~Dvvid~~g~------~~~-~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 209 TNGIGADAAIDSIGG------PDG-NELAFSLRPNGHFLTIG 243 (340)
T ss_dssp TTTSCEEEEEESSCH------HHH-HHHHHTEEEEEEEEECC
T ss_pred hCCCCCcEEEECCCC------hhH-HHHHHHhcCCCEEEEEe
Confidence 11479999875332 122 33447999999987743
No 343
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.73 E-value=0.086 Score=46.54 Aligned_cols=82 Identities=10% Similarity=0.135 Sum_probs=50.5
Q ss_pred HHcCCCCCCEEEEEcCCcchHHHHHHHH-------CCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCC
Q 022836 57 ERSRLEDGHTVLDVGCGWGSLSLYIAQK-------YSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEA 129 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG~G~~~~~la~~-------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 129 (291)
+.++.+...+|+|+|.|.|.++.-+.+. +...+++.||+|+...+.-++.... .+++.+. .++.+++.
T Consensus 74 ~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~--~~~v~W~-~~l~~lp~-- 148 (387)
T 1zkd_A 74 KAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG--IRNIHWH-DSFEDVPE-- 148 (387)
T ss_dssp HHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT--CSSEEEE-SSGGGSCC--
T ss_pred HHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC--CCCeEEe-CChhhcCC--
Confidence 3455556678999999999998777643 1245899999999876543333222 2246654 33444432
Q ss_pred CccEEEEccccccc
Q 022836 130 SYDRIYSIEMFEHM 143 (291)
Q Consensus 130 ~~D~i~~~~~l~~~ 143 (291)
..-+|+++.+|..+
T Consensus 149 ~~~~viANE~fDAl 162 (387)
T 1zkd_A 149 GPAVILANEYFDVL 162 (387)
T ss_dssp SSEEEEEESSGGGS
T ss_pred CCeEEEeccccccC
Confidence 23466666665444
No 344
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.72 E-value=0.022 Score=49.98 Aligned_cols=97 Identities=14% Similarity=0.275 Sum_probs=65.0
Q ss_pred HHcCCC-----CCCEEEEEc-CC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc--cc----c
Q 022836 57 ERSRLE-----DGHTVLDVG-CG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA--DI----S 123 (291)
Q Consensus 57 ~~~~~~-----~~~~vLDiG-cG-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~--d~----~ 123 (291)
+..... ++.+||=+| +| .|..+..+++...+++|++++.+++..+.+++ .|.+. ++.. |+ .
T Consensus 160 ~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad~--vi~~~~~~~~~v~ 233 (363)
T 4dvj_A 160 DRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAHH--VIDHSKPLAAEVA 233 (363)
T ss_dssp TTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCSE--EECTTSCHHHHHH
T ss_pred HhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCCE--EEeCCCCHHHHHH
Confidence 444555 788999998 54 68888888876348899999999987666543 45421 1111 11 1
Q ss_pred CCccCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 124 TFEMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 124 ~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+. ..+.+|+|+-.. .-...++.+.++|+|+|++++.
T Consensus 234 ~~-~~~g~Dvvid~~------g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 234 AL-GLGAPAFVFSTT------HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp TT-CSCCEEEEEECS------CHHHHHHHHHHHSCTTCEEEEC
T ss_pred Hh-cCCCceEEEECC------CchhhHHHHHHHhcCCCEEEEE
Confidence 11 115789887642 2345678888999999998864
No 345
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.70 E-value=0.043 Score=47.58 Aligned_cols=95 Identities=16% Similarity=0.196 Sum_probs=64.6
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC---Cc-----
Q 022836 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST---FE----- 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~----- 126 (291)
+.....++.+||-.|+ |.|..+..+++.. +++|++++.+++..+.+++ ..|.+ . .+ |..+ +.
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~---~~g~~-~-~~--d~~~~~~~~~~~~~ 220 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKT---KFGFD-D-AF--NYKEESDLTAALKR 220 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH---TSCCS-E-EE--ETTSCSCSHHHHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---HcCCc-e-EE--ecCCHHHHHHHHHH
Confidence 4557788999999997 5777888887765 7899999999886665542 23432 1 11 2221 11
Q ss_pred -cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 127 -MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 -~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
....+|+|+.+..- ..++...++|+++|++++.
T Consensus 221 ~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 221 CFPNGIDIYFENVGG-------KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp HCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEEC
T ss_pred HhCCCCcEEEECCCH-------HHHHHHHHHHhcCCEEEEE
Confidence 01368988865321 3678888999999998764
No 346
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.70 E-value=0.033 Score=48.39 Aligned_cols=94 Identities=15% Similarity=0.214 Sum_probs=62.6
Q ss_pred CCCCCCEEEEEcCCc-chHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEE----ccc-cCCccCCCcc
Q 022836 60 RLEDGHTVLDVGCGW-GSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIV----ADI-STFEMEASYD 132 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~-G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~----~d~-~~~~~~~~~D 132 (291)
.. ++.+||-+|+|. |..+..+++.. |+++|+++|.+++..+.+++ .|.+. ++. .|. ..+.....+|
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~~~~~g~g~D 240 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGADY--VSEMKDAESLINKLTDGLGAS 240 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCSE--EECHHHHHHHHHHHHTTCCEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCCE--EeccccchHHHHHhhcCCCcc
Confidence 66 899999999974 67777777653 47899999999987766654 45421 121 111 1111113699
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 133 ~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+|+-...- ...++.+.+.|+|+|++++.
T Consensus 241 ~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 241 IAIDLVGT------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEESSCC------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCC------hHHHHHHHHHhhcCCEEEEe
Confidence 99865332 34678888999999998764
No 347
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.70 E-value=0.042 Score=47.73 Aligned_cols=95 Identities=15% Similarity=0.291 Sum_probs=64.4
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcccc---CCcc----
Q 022836 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS---TFEM---- 127 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~---~~~~---- 127 (291)
......++.+||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|.+ .. .|.. ++..
T Consensus 163 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~----~g~~--~~--~d~~~~~~~~~~~~~ 233 (347)
T 2hcy_A 163 KSANLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRS----IGGE--VF--IDFTKEKDIVGAVLK 233 (347)
T ss_dssp HTTTCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHH----TTCC--EE--EETTTCSCHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHH----cCCc--eE--EecCccHhHHHHHHH
Confidence 4456788999999998 4677777777665 7899999998886655443 3432 11 1332 1110
Q ss_pred --CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 128 --EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 --~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
.+.+|+|+.+... ...++.+.+.|+++|++++.
T Consensus 234 ~~~~~~D~vi~~~g~------~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 234 ATDGGAHGVINVSVS------EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp HHTSCEEEEEECSSC------HHHHHHHTTSEEEEEEEEEC
T ss_pred HhCCCCCEEEECCCc------HHHHHHHHHHHhcCCEEEEE
Confidence 1268988876432 35678889999999998764
No 348
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.69 E-value=0.021 Score=49.37 Aligned_cols=75 Identities=7% Similarity=0.084 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC-CCCEE-EEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC----CCccEEEE
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY-SNCKI-TGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----ASYDRIYS 136 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~-~~~~v-~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~----~~~D~i~~ 136 (291)
...+++|+.||.|+++..+.+.. +...+ .++|+++...+..+.|... . ++.+|+.++... ..+|+++.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-----~-~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-----E-VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-----C-CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-----C-cccCChhhcCHHHhccCCCCEEEe
Confidence 35699999999999999988652 11356 6999999988777776521 1 567888887533 36899998
Q ss_pred ccccccc
Q 022836 137 IEMFEHM 143 (291)
Q Consensus 137 ~~~l~~~ 143 (291)
..+-..+
T Consensus 83 gpPCQ~f 89 (327)
T 3qv2_A 83 SPPCQPY 89 (327)
T ss_dssp CCCCTTC
T ss_pred cCCccCc
Confidence 8765544
No 349
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.56 E-value=0.028 Score=48.75 Aligned_cols=74 Identities=9% Similarity=0.139 Sum_probs=54.5
Q ss_pred CEEEEEcCCcchHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC----CCccEEEEccc
Q 022836 65 HTVLDVGCGWGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----ASYDRIYSIEM 139 (291)
Q Consensus 65 ~~vLDiGcG~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~----~~~D~i~~~~~ 139 (291)
.+++|+.||.|+++..+.+..-+ ..|.++|+++...+..+.|.. ...++.+|+.++... ..+|+++...+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~~~~~~~~D~l~ggpP 78 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQVIKKWNVDTILMSPP 78 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHHHHHHTTCCEEEECCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHHHhccCCCCEEEecCC
Confidence 58999999999999999876211 357899999997776665542 345678899887533 36899998776
Q ss_pred cccc
Q 022836 140 FEHM 143 (291)
Q Consensus 140 l~~~ 143 (291)
-..+
T Consensus 79 CQ~f 82 (333)
T 4h0n_A 79 CQPF 82 (333)
T ss_dssp CCCS
T ss_pred Ccch
Confidence 5443
No 350
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.45 E-value=0.053 Score=47.02 Aligned_cols=102 Identities=8% Similarity=-0.006 Sum_probs=63.9
Q ss_pred HHHcCCCCCCEEEEEcCCcc-hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCC-eEEEEccccCC----ccCC
Q 022836 56 CERSRLEDGHTVLDVGCGWG-SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQN-VEIIVADISTF----EMEA 129 (291)
Q Consensus 56 ~~~~~~~~~~~vLDiGcG~G-~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~----~~~~ 129 (291)
++....+++.+||=+|+|.+ .++..+++...+.+|+++|.+++..+.++ ..|.+. +.....|..+. ....
T Consensus 156 l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~----~~Ga~~~i~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 156 IKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK----KIGADVTINSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH----HTTCSEEEEC-CCCHHHHHHHHTTSS
T ss_pred ecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh----hcCCeEEEeCCCCCHHHHhhhhcCCC
Confidence 34557789999999999864 45666666555789999999998655444 445421 22222222111 1113
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 130 ~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
.+|.++.... -...+....+.|+++|.+++..
T Consensus 232 g~d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 232 GVQSAIVCAV------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp CEEEEEECCS------CHHHHHHHHHTEEEEEEEEECC
T ss_pred CceEEEEecc------CcchhheeheeecCCceEEEEe
Confidence 4666655322 2456788889999999987643
No 351
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.44 E-value=0.019 Score=49.89 Aligned_cols=96 Identities=20% Similarity=0.308 Sum_probs=65.7
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------cC
Q 022836 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ME 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~ 128 (291)
+....+++.+||-.|+ |.|..+..+++.. +++|++++.+++..+.+++ .|.+ .++..+ .++. ..
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~--~v~~~~-~~~~~~v~~~~~ 224 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKS----VGAD--IVLPLE-EGWAKAVREATG 224 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH----HTCS--EEEESS-TTHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCc--EEecCc-hhHHHHHHHHhC
Confidence 4556788999999997 4688888888776 8899999999987766654 3442 222222 2221 11
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 -~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
..+|+|+.+..- ..+..+.++|+++|++++..
T Consensus 225 ~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 225 GAGVDMVVDPIGG-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred CCCceEEEECCch-------hHHHHHHHhhcCCCEEEEEE
Confidence 369999865432 24677888999999988743
No 352
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.38 E-value=0.057 Score=47.57 Aligned_cols=97 Identities=16% Similarity=0.126 Sum_probs=64.8
Q ss_pred HHcC-CCCCCEEEEEcCC-cchHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcc------ccC---
Q 022836 57 ERSR-LEDGHTVLDVGCG-WGSLSLYIAQKYSN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVAD------IST--- 124 (291)
Q Consensus 57 ~~~~-~~~~~~vLDiGcG-~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d------~~~--- 124 (291)
+... ..++.+||-+|+| .|..+..+++.. + .+|++++.+++..+.++ +.|.+ .++..+ +.+
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~--~vi~~~~~~~~~~~~~v~ 260 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAE----EIGAD--LTLNRRETSVEERRKAIM 260 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHH----HTTCS--EEEETTTSCHHHHHHHHH
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHH----HcCCc--EEEeccccCcchHHHHHH
Confidence 4556 7889999999976 477888888776 7 59999999998766654 34542 122211 111
Q ss_pred -CccCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 125 -FEMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 125 -~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
......+|+|+-...- ...++...++|+++|+++..
T Consensus 261 ~~~~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 261 DITHGRGADFILEATGD------SRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHTTTSCEEEEEECSSC------TTHHHHHHHHEEEEEEEEEC
T ss_pred HHhCCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEE
Confidence 1111369998865322 23567788899999998764
No 353
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.33 E-value=0.12 Score=45.21 Aligned_cols=97 Identities=20% Similarity=0.309 Sum_probs=65.5
Q ss_pred HHcCCCCCCEEEEEc--CCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------cC
Q 022836 57 ERSRLEDGHTVLDVG--CGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ME 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~ 128 (291)
+....+++.+||-.| +|.|..+..+++.. +++|++++.+++..+.+++ .|.+ ..+..+-.++. ..
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~----~Ga~--~~~~~~~~~~~~~~~~~~~ 229 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKS----LGCD--RPINYKTEPVGTVLKQEYP 229 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTCS--EEEETTTSCHHHHHHHHCT
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH----cCCc--EEEecCChhHHHHHHHhcC
Confidence 445678899999999 45788888888776 8899999999887665543 4442 12221111110 11
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
..+|+|+.+..- ..++.+.++|+++|.+++..
T Consensus 230 ~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 230 EGVDVVYESVGG-------AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp TCEEEEEECSCT-------HHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCCH-------HHHHHHHHHHhcCCEEEEEe
Confidence 468998865331 46778889999999887643
No 354
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.31 E-value=0.065 Score=46.52 Aligned_cols=98 Identities=18% Similarity=0.220 Sum_probs=63.8
Q ss_pred HHcCCCCCCEEEEEcCC--cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC----c--cC
Q 022836 57 ERSRLEDGHTVLDVGCG--WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF----E--ME 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG--~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~--~~ 128 (291)
......++.+||-.|+| .|..+..+++...+++|+++|.+++..+.+++ .|.+ ..+...+ .+. . ..
T Consensus 164 ~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~----~g~~-~~~~~~~-~~~~~~~~~~~~ 237 (347)
T 1jvb_A 164 RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AGAD-YVINASM-QDPLAEIRRITE 237 (347)
T ss_dssp HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HTCS-EEEETTT-SCHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCC-EEecCCC-ccHHHHHHHHhc
Confidence 44677889999999997 55666666655336899999999987766643 3432 1111111 111 0 11
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 -~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+.+|+|+.+..- ...++.+.+.|+|+|++++.
T Consensus 238 ~~~~d~vi~~~g~------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 238 SKGVDAVIDLNNS------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp TSCEEEEEESCCC------HHHHTTGGGGEEEEEEEEEC
T ss_pred CCCceEEEECCCC------HHHHHHHHHHHhcCCEEEEE
Confidence 368988865332 34677788999999998763
No 355
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.18 E-value=0.094 Score=45.21 Aligned_cols=95 Identities=11% Similarity=0.087 Sum_probs=63.7
Q ss_pred cCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-------cCC
Q 022836 59 SRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------MEA 129 (291)
Q Consensus 59 ~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-------~~~ 129 (291)
....++.+||-+|+ |.|..+..+++.. +++|++++.+++.++.+++ .|.+ ..+..+-.++. ...
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~--~~~~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKE----YGAE--YLINASKEDILRQVLKFTNGK 216 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTCS--EEEETTTSCHHHHHHHHTTTS
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCc--EEEeCCCchHHHHHHHHhCCC
Confidence 46788999999994 4677888888776 8899999999987665543 4432 12221111111 124
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 130 ~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
.+|+|+.+..- ..++.+.++|+|+|++++..
T Consensus 217 g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 217 GVDASFDSVGK-------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp CEEEEEECCGG-------GGHHHHHHHEEEEEEEEECC
T ss_pred CceEEEECCCh-------HHHHHHHHHhccCCEEEEEc
Confidence 69998865432 35677788999999987743
No 356
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.03 E-value=0.15 Score=43.71 Aligned_cols=94 Identities=10% Similarity=0.092 Sum_probs=62.9
Q ss_pred HcCCCCCCEEEEEc--CCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc---------
Q 022836 58 RSRLEDGHTVLDVG--CGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--------- 126 (291)
Q Consensus 58 ~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--------- 126 (291)
.....++.+||-.| +|.|..+..+++.. +++|++++.+++..+.+++ .|.+ . .+ |..+..
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~----~g~~-~-~~--~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALK----AGAW-Q-VI--NYREEDLVERLKEIT 205 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHH----HTCS-E-EE--ETTTSCHHHHHHHHT
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----cCCC-E-EE--ECCCccHHHHHHHHh
Confidence 45677899999999 35677777777655 7899999999887666654 3432 1 11 222211
Q ss_pred cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 127 MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 127 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
....+|+++.+.. ...++.+.++|+++|++++..
T Consensus 206 ~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 206 GGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp TTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECC
T ss_pred CCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEe
Confidence 1136899987643 235677889999999987643
No 357
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.01 E-value=0.28 Score=42.62 Aligned_cols=95 Identities=20% Similarity=0.232 Sum_probs=63.6
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--------
Q 022836 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------- 126 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-------- 126 (291)
+.....++.+||-.|+ |.|..+..+++.. +++|++++.+++..+.++ ..|.+ ..+ |..+..
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~----~~ga~--~~~--d~~~~~~~~~~~~~ 234 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVL----QNGAH--EVF--NHREVNYIDKIKKY 234 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HTTCS--EEE--ETTSTTHHHHHHHH
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHH----HcCCC--EEE--eCCCchHHHHHHHH
Confidence 3456788999999997 5677777777765 889999999998766443 34442 111 222211
Q ss_pred c-CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 127 M-EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 127 ~-~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
. ...+|+|+.+..- ..+....++|+++|++++..
T Consensus 235 ~~~~~~D~vi~~~G~-------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 235 VGEKGIDIIIEMLAN-------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HCTTCEEEEEESCHH-------HHHHHHHHHEEEEEEEEECC
T ss_pred cCCCCcEEEEECCCh-------HHHHHHHHhccCCCEEEEEe
Confidence 1 1368998875431 24677789999999987643
No 358
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.97 E-value=0.055 Score=47.21 Aligned_cols=94 Identities=14% Similarity=0.169 Sum_probs=61.3
Q ss_pred HHcCCCCC------CEEEEEcCC-cchHH-HHHH-HHCCCCE-EEEEcCCHH---HHHHHHHHHHHhCCCCeEEEEcccc
Q 022836 57 ERSRLEDG------HTVLDVGCG-WGSLS-LYIA-QKYSNCK-ITGICNSKT---QKEFIEEQCRVLELQNVEIIVADIS 123 (291)
Q Consensus 57 ~~~~~~~~------~~vLDiGcG-~G~~~-~~la-~~~~~~~-v~~vD~s~~---~~~~a~~~~~~~~~~~v~~~~~d~~ 123 (291)
+....+++ .+||-+|+| .|.++ ..++ +.. +++ |++++.+++ ..+.++ +.|. +.+ |..
T Consensus 160 ~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~----~lGa---~~v--~~~ 229 (357)
T 2b5w_A 160 EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIE----ELDA---TYV--DSR 229 (357)
T ss_dssp HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHH----HTTC---EEE--ETT
T ss_pred HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHH----HcCC---ccc--CCC
Confidence 34455678 999999986 46777 7777 655 776 999999887 666554 3444 222 322
Q ss_pred CCcc------CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 124 TFEM------EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 124 ~~~~------~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+... .+.+|+|+-...- ...++.+.++|+++|+++..
T Consensus 230 ~~~~~~i~~~~gg~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 230 QTPVEDVPDVYEQMDFIYEATGF------PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp TSCGGGHHHHSCCEEEEEECSCC------HHHHHHHHHHEEEEEEEEEC
T ss_pred ccCHHHHHHhCCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEE
Confidence 2110 1268888754221 34577888999999998764
No 359
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.97 E-value=0.08 Score=45.98 Aligned_cols=97 Identities=13% Similarity=0.096 Sum_probs=64.1
Q ss_pred HHcCCCCCCEEEEEcCC-cchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-------c
Q 022836 57 ERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------M 127 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-------~ 127 (291)
+.... ++.+||-+|+| .|..+..+++.. ++ +|+++|.+++..+.+++ .|.+. ++..+-.++. .
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~----~Ga~~--~~~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKK----VGADY--VINPFEEDVVKEVMDITD 233 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHH----HTCSE--EECTTTSCHHHHHHHHTT
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----hCCCE--EECCCCcCHHHHHHHHcC
Confidence 44566 89999999996 377777888766 77 99999999987666543 44421 2211111110 1
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
...+|+|+..... ...++.+.+.|+++|+++...
T Consensus 234 g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 234 GNGVDVFLEFSGA------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp TSCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEc
Confidence 1368998865332 356778889999999987643
No 360
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.94 E-value=0.12 Score=45.00 Aligned_cols=97 Identities=19% Similarity=0.221 Sum_probs=64.7
Q ss_pred HHcCCCCCCEEEEEc--CCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc------C
Q 022836 57 ERSRLEDGHTVLDVG--CGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM------E 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~------~ 128 (291)
+....+++.+||-.| +|.|..+..+++.. +++|++++.+++..+.+++ .|.+ ..+..+-.++.. .
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~--~~~~~~~~~~~~~~~~~~~ 233 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACER----LGAK--RGINYRSEDFAAVIKAETG 233 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHHS
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCC--EEEeCCchHHHHHHHHHhC
Confidence 445678899999995 34678888888776 8899999999997766654 3442 122211111110 2
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
..+|+|+.+..- ..+....+.|+++|.+++..
T Consensus 234 ~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 234 QGVDIILDMIGA-------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp SCEEEEEESCCG-------GGHHHHHHTEEEEEEEEECC
T ss_pred CCceEEEECCCH-------HHHHHHHHHhccCCEEEEEE
Confidence 468998875432 24667788999999987643
No 361
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.89 E-value=0.088 Score=45.23 Aligned_cols=97 Identities=15% Similarity=0.104 Sum_probs=64.7
Q ss_pred HHcCCCCCCEEEEEc-C-CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-------c
Q 022836 57 ERSRLEDGHTVLDVG-C-GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------M 127 (291)
Q Consensus 57 ~~~~~~~~~~vLDiG-c-G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-------~ 127 (291)
+....+++.+||-.| + |.|..+..+++.. +++|++++.+++.++.+++ .|.+ ..+..+-.++. .
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~Ga~--~~~~~~~~~~~~~~~~~~~ 206 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKA----LGAW--ETIDYSHEDVAKRVLELTD 206 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCC--EEEeCCCccHHHHHHHHhC
Confidence 334678899999998 3 4678888888765 8899999999987766653 3432 12221111111 1
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
...+|+|+.+..- ..+....++|+++|++++..
T Consensus 207 ~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 207 GKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp TCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECC
T ss_pred CCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEe
Confidence 1469998865332 35667889999999987743
No 362
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.74 E-value=0.016 Score=49.44 Aligned_cols=56 Identities=13% Similarity=0.107 Sum_probs=42.0
Q ss_pred CCeEEEEccccCCc--c-CCCccEEEEcccccccc--------------------cHHHHHHHHHhccccCeeEEEEee
Q 022836 113 QNVEIIVADISTFE--M-EASYDRIYSIEMFEHMK--------------------NYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 113 ~~v~~~~~d~~~~~--~-~~~~D~i~~~~~l~~~~--------------------~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
.++.++++|+.+.. . +++||+|+++.++.... .+..+++.+.++|||||.+++...
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 36789999998742 2 27899999999885321 134577889999999999988654
No 363
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.73 E-value=0.055 Score=47.26 Aligned_cols=99 Identities=18% Similarity=0.128 Sum_probs=63.5
Q ss_pred HHcCCCCCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcccc-CCc--cCCCcc
Q 022836 57 ERSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS-TFE--MEASYD 132 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~--~~~~~D 132 (291)
......++.+||-+|+| .|..+..+++.. +++|++++.+++.++.+++ .|.+. ++..+-. ++. ..+.+|
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~--v~~~~~~~~~~~~~~~~~D 245 (360)
T 1piw_A 173 VRNGCGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMK----MGADH--YIATLEEGDWGEKYFDTFD 245 (360)
T ss_dssp HHTTCSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH----HTCSE--EEEGGGTSCHHHHSCSCEE
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH----cCCCE--EEcCcCchHHHHHhhcCCC
Confidence 34677889999999986 477777887765 7899999999887766654 45421 2221111 111 014799
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 133 ~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+|+....-.. ...++.+.++|+++|+++..
T Consensus 246 ~vid~~g~~~----~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 246 LIVVCASSLT----DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEECCSCST----TCCTTTGGGGEEEEEEEEEC
T ss_pred EEEECCCCCc----HHHHHHHHHHhcCCCEEEEe
Confidence 9986543200 12345567889999998764
No 364
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.71 E-value=0.11 Score=44.52 Aligned_cols=97 Identities=11% Similarity=0.196 Sum_probs=63.0
Q ss_pred HHcCCCCCC-EEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--cCCCc
Q 022836 57 ERSRLEDGH-TVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--MEASY 131 (291)
Q Consensus 57 ~~~~~~~~~-~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~ 131 (291)
.+....++. +||=.|+ |.|..+..+++.. +++|++++.+++..+.+++ .|.+. .+-..+..... ....+
T Consensus 139 ~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~-vi~~~~~~~~~~~~~~~~ 212 (324)
T 3nx4_A 139 EDAGIRPQDGEVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKS----LGANR-ILSRDEFAESRPLEKQLW 212 (324)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHH----HTCSE-EEEGGGSSCCCSSCCCCE
T ss_pred hhcccCCCCCeEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCCE-EEecCCHHHHHhhcCCCc
Confidence 344455422 4999997 4788899999876 8899999999998777654 45421 11112211111 11568
Q ss_pred cEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 132 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 132 D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
|+|+-.- . ...++.+.++|+|+|+++..
T Consensus 213 d~v~d~~-----g--~~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 213 AGAIDTV-----G--DKVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp EEEEESS-----C--HHHHHHHHHTEEEEEEEEEC
T ss_pred cEEEECC-----C--cHHHHHHHHHHhcCCEEEEE
Confidence 8876532 2 12788899999999998774
No 365
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.60 E-value=0.13 Score=44.45 Aligned_cols=93 Identities=20% Similarity=0.240 Sum_probs=63.2
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-------c
Q 022836 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------M 127 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-------~ 127 (291)
+.....++.+||-+|+ |.|..+..+++.. +++|+++ .+++.++.++ +.|.+ .+. +-.++. .
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~----~lGa~---~i~-~~~~~~~~~~~~~~ 213 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVR----DLGAT---PID-ASREPEDYAAEHTA 213 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHH----HHTSE---EEE-TTSCHHHHHHHHHT
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHH----HcCCC---Eec-cCCCHHHHHHHHhc
Confidence 5567789999999994 4688888888776 8899999 8888665554 34542 222 222211 1
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
...+|+|+-+.. ...+....++|+++|.+++.
T Consensus 214 ~~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 214 GQGFDLVYDTLG-------GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp TSCEEEEEESSC-------THHHHHHHHHEEEEEEEEES
T ss_pred CCCceEEEECCC-------cHHHHHHHHHHhcCCeEEEE
Confidence 146998886432 14677788899999998763
No 366
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.57 E-value=0.29 Score=43.37 Aligned_cols=96 Identities=15% Similarity=0.114 Sum_probs=60.6
Q ss_pred CCCCCCEEEEEcCCc-chHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-------cCCC
Q 022836 60 RLEDGHTVLDVGCGW-GSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-------MEAS 130 (291)
Q Consensus 60 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-------~~~~ 130 (291)
...++.+||=+|+|. |..+..+++.. ++ +|+++|.+++..+.+++ .|.+ .++..+-.++. ....
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~~----lGa~--~vi~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHA-GASKVILSEPSEVRRNLAKE----LGAD--HVIDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHH----HTCS--EEECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----cCCC--EEEcCCCCCHHHHHHHHhCCCC
Confidence 567899999999874 77888888776 77 99999999987766654 4542 12211111111 1146
Q ss_pred ccEEEEcccccccccHHHHHHHHH----hccccCeeEEEEe
Q 022836 131 YDRIYSIEMFEHMKNYQNLLKKIS----KWMKEDTLLFVHH 167 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~~~l~~~~----~~LkpgG~l~~~~ 167 (291)
+|+|+-.-. .....+..+. +.++++|++++..
T Consensus 283 ~D~vid~~g-----~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 283 AKLFLEATG-----VPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp CSEEEECSS-----CHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCEEEECCC-----CcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 999885422 2222334444 4459999988743
No 367
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.56 E-value=0.14 Score=44.23 Aligned_cols=92 Identities=11% Similarity=0.158 Sum_probs=63.6
Q ss_pred cCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc--------cC
Q 022836 59 SRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--------ME 128 (291)
Q Consensus 59 ~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--------~~ 128 (291)
....++.+||-.|+ |.|..+..+++.. +++|++++.+++.++.+++ .|.+. .+ |..+.. ..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~----~ga~~--~~--d~~~~~~~~~~~~~~~ 232 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKA----LGADE--TV--NYTHPDWPKEVRRLTG 232 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCSE--EE--ETTSTTHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----cCCCE--EE--cCCcccHHHHHHHHhC
Confidence 36678999999998 5788888888766 7899999999987776643 34421 12 222211 11
Q ss_pred -CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 129 -ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 -~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
..+|+|+.+.. . ..++.+.+.|+++|++++.
T Consensus 233 ~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 233 GKGADKVVDHTG-A------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp TTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEES
T ss_pred CCCceEEEECCC-H------HHHHHHHHhhccCCEEEEE
Confidence 36899987643 1 2466778889999988763
No 368
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.50 E-value=0.22 Score=42.78 Aligned_cols=94 Identities=17% Similarity=0.199 Sum_probs=63.6
Q ss_pred HcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc---------
Q 022836 58 RSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--------- 126 (291)
Q Consensus 58 ~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--------- 126 (291)
.....++.+||-.|+ |.|..+..+++.. +++|++++.+++..+.+++ .|.+ . .+ |..+..
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~----~g~~-~-~~--d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARK----LGCH-H-TI--NYSTQDFAEVVREIT 210 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCS-E-EE--ETTTSCHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCC-E-EE--ECCCHHHHHHHHHHh
Confidence 456778999999995 5777777777765 7899999999987666543 3432 1 11 222211
Q ss_pred cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 127 MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 127 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
....+|+|+.+..- ..++.+.++|+++|+++...
T Consensus 211 ~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 211 GGKGVDVVYDSIGK-------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp TTCCEEEEEECSCT-------TTHHHHHHTEEEEEEEEECC
T ss_pred CCCCCeEEEECCcH-------HHHHHHHHhhccCCEEEEEe
Confidence 11368998865432 34677889999999887643
No 369
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.46 E-value=0.15 Score=44.29 Aligned_cols=96 Identities=14% Similarity=0.046 Sum_probs=62.7
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-------cc
Q 022836 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-------EM 127 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-------~~ 127 (291)
+.....++.+||-.|+ |.|..+..+++.. +++|++++.+++.++.+++ .|.+ . .+..+-.+. ..
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~g~~-~-~~~~~~~~~~~~~~~~~~ 228 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEK----LGAA-A-GFNYKKEDFSEATLKFTK 228 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----HTCS-E-EEETTTSCHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----cCCc-E-EEecCChHHHHHHHHHhc
Confidence 4456788999999984 5677777777765 8899999999987766633 3432 1 111111111 01
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
...+|+|+.+..- ..+....++|+++|.+++.
T Consensus 229 ~~~~d~vi~~~G~-------~~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 229 GAGVNLILDCIGG-------SYWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp TSCEEEEEESSCG-------GGHHHHHHHEEEEEEEEEC
T ss_pred CCCceEEEECCCc-------hHHHHHHHhccCCCEEEEE
Confidence 1368998876432 1356677889999998764
No 370
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.30 E-value=0.28 Score=36.35 Aligned_cols=91 Identities=15% Similarity=0.127 Sum_probs=55.7
Q ss_pred CCEEEEEcCCc-chH-HHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----C-CCccEEEE
Q 022836 64 GHTVLDVGCGW-GSL-SLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----E-ASYDRIYS 136 (291)
Q Consensus 64 ~~~vLDiGcG~-G~~-~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----~-~~~D~i~~ 136 (291)
..+|+=+|||. |.. +..|.+. +.+|+++|.+++.++.+++ . .+.++.+|..+... . ..+|+|++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~----~---g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRE----R---GVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHH----T---TCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHH----c---CCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 35889999874 332 3333332 7899999999997665543 2 46778899876421 1 57898887
Q ss_pred cccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 137 IEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 137 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
...-. .....+-...+.+.|+..++..
T Consensus 78 ~~~~~---~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 78 TIPNG---YEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp CCSCH---HHHHHHHHHHHHHCSSSEEEEE
T ss_pred ECCCh---HHHHHHHHHHHHHCCCCeEEEE
Confidence 53221 1122233345667788776553
No 371
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.11 E-value=0.057 Score=47.16 Aligned_cols=100 Identities=20% Similarity=0.208 Sum_probs=61.7
Q ss_pred HHHcCCC-CCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc-cCCCcc
Q 022836 56 CERSRLE-DGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE-MEASYD 132 (291)
Q Consensus 56 ~~~~~~~-~~~~vLDiGcG-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D 132 (291)
+...... ++.+||-+|+| .|..+..+++.. +++|++++.+++..+.+++ +.|.+.+ +...+..... ..+.+|
T Consensus 172 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~---~lGa~~v-i~~~~~~~~~~~~~g~D 246 (357)
T 2cf5_A 172 LSHFGLKQPGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQ---DLGADDY-VIGSDQAKMSELADSLD 246 (357)
T ss_dssp HHHTSTTSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHT---TSCCSCE-EETTCHHHHHHSTTTEE
T ss_pred HHhcCCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHH---HcCCcee-eccccHHHHHHhcCCCC
Confidence 3445667 89999999987 466777777765 7899999999876554431 3444321 1111111110 114689
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 133 ~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+|+-.-.-. ..++...++|+|+|+++..
T Consensus 247 ~vid~~g~~------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 247 YVIDTVPVH------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EEEECCCSC------CCSHHHHTTEEEEEEEEEC
T ss_pred EEEECCCCh------HHHHHHHHHhccCCEEEEe
Confidence 888643221 1245567899999998763
No 372
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.09 E-value=0.4 Score=41.57 Aligned_cols=97 Identities=18% Similarity=0.316 Sum_probs=64.3
Q ss_pred HHHHcCCCCC--CEEEEEcC--CcchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc---
Q 022836 55 YCERSRLEDG--HTVLDVGC--GWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE--- 126 (291)
Q Consensus 55 ~~~~~~~~~~--~~vLDiGc--G~G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--- 126 (291)
+.+.....++ .+||-.|+ |.|..+..+++.. ++ +|++++.+++..+.+++ ..|.+ .. .|..+..
T Consensus 150 l~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~---~~g~~--~~--~d~~~~~~~~ 221 (357)
T 2zb4_A 150 IQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTS---ELGFD--AA--INYKKDNVAE 221 (357)
T ss_dssp HHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHH---TSCCS--EE--EETTTSCHHH
T ss_pred HHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHH---HcCCc--eE--EecCchHHHH
Confidence 3356677888 99999997 4667777777665 77 99999999876555443 13432 11 2222211
Q ss_pred -----cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 127 -----MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 -----~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
..+.+|+++.+.. ...++.+.++|+++|++++.
T Consensus 222 ~~~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 222 QLRESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp HHHHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEEC
T ss_pred HHHHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEE
Confidence 0125898886543 25678888999999998764
No 373
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=94.07 E-value=0.8 Score=37.69 Aligned_cols=104 Identities=11% Similarity=0.187 Sum_probs=67.9
Q ss_pred CCCEEEEEcCC--cch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC---------
Q 022836 63 DGHTVLDVGCG--WGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME--------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG--~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~--------- 128 (291)
.++++|=.|++ .|. ++..|++. +++|+.++.+....+.+.+.....+..++.++.+|+.+...-
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 46789988876 232 45555555 889999998877666665555544434689999999885310
Q ss_pred --CCccEEEEcccccc----------c--ccH-----------HHHHHHHHhccccCeeEEEEee
Q 022836 129 --ASYDRIYSIEMFEH----------M--KNY-----------QNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 129 --~~~D~i~~~~~l~~----------~--~~~-----------~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
+..|+++.+..+.. . .+. ..+++.+...++++|.++....
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 47899988764432 1 111 1255667778888888776543
No 374
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.05 E-value=0.1 Score=44.24 Aligned_cols=91 Identities=9% Similarity=0.046 Sum_probs=61.4
Q ss_pred CCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccc-cCCccC-CCccEEEE
Q 022836 61 LEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI-STFEME-ASYDRIYS 136 (291)
Q Consensus 61 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~-~~~D~i~~ 136 (291)
.+++.+||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|.+. .+..+- .++... ..+|+|+.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~~--~~~~~~~~~~~~~~~~~d~vid 195 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLA----LGAEE--AATYAEVPERAKAWGGLDLVLE 195 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHH----TTCSE--EEEGGGHHHHHHHTTSEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----cCCCE--EEECCcchhHHHHhcCceEEEE
Confidence 778999999997 4677888888776 7899999999887666543 44421 121110 111111 56898886
Q ss_pred cccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 137 IEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 137 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
..- ..++...++|+++|+++..
T Consensus 196 -~g~-------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 196 -VRG-------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp -CSC-------TTHHHHHTTEEEEEEEEEC
T ss_pred -CCH-------HHHHHHHHhhccCCEEEEE
Confidence 321 2467788999999988763
No 375
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=94.00 E-value=0.32 Score=42.74 Aligned_cols=99 Identities=16% Similarity=0.137 Sum_probs=68.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC--CeEEEEccccCCccCCCccEEEEcccc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ--NVEIIVADISTFEMEASYDRIYSIEMF 140 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~~~~l 140 (291)
.+.+||.++.+.|.++..++.. .++.+.=|--....++.|...++++ ++++... ... .+..||+|+...+
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~--~~~~~~~v~~~lp- 109 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH----KPYSIGDSYISELATRENLRLNGIDESSVKFLDS-TAD--YPQQPGVVLIKVP- 109 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSC--CCSSCSEEEEECC-
T ss_pred CCCCEEEECCCCCHHHHhhccC----CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-ccc--cccCCCEEEEEcC-
Confidence 4568999999999999888754 3344433555556677888888884 3565422 222 2368999888544
Q ss_pred cccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 141 EHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
.........+..+...|+||+.+++..-.
T Consensus 110 k~~~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 110 KTLALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp SCHHHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 23345677888999999999998775543
No 376
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.00 E-value=0.17 Score=44.22 Aligned_cols=86 Identities=16% Similarity=0.153 Sum_probs=56.3
Q ss_pred CCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCH---HHHHHHHHHHHHhCCCCeEEEEccccC-Ccc-----CCCccE
Q 022836 64 GHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSK---TQKEFIEEQCRVLELQNVEIIVADIST-FEM-----EASYDR 133 (291)
Q Consensus 64 ~~~vLDiGcG-~G~~~~~la~~~~~~~v~~vD~s~---~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~-----~~~~D~ 133 (291)
+.+||-+|+| .|..+..+++.. +++|++++.++ +..+.++ ..|. +.+ | .+ +.. ...+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~----~~ga---~~v--~-~~~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIE----ETKT---NYY--N-SSNGYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHH----HHTC---EEE--E-CTTCSHHHHHHHCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHH----HhCC---cee--c-hHHHHHHHHHhCCCCCE
Confidence 8999999985 355666666655 78999999987 6555443 3444 222 2 22 110 146899
Q ss_pred EEEcccccccccHHHHH-HHHHhccccCeeEEEE
Q 022836 134 IYSIEMFEHMKNYQNLL-KKISKWMKEDTLLFVH 166 (291)
Q Consensus 134 i~~~~~l~~~~~~~~~l-~~~~~~LkpgG~l~~~ 166 (291)
|+...... ..+ +.+.+.|+++|.+++.
T Consensus 250 vid~~g~~------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 250 IIDATGAD------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEECCCCC------THHHHHHGGGEEEEEEEEEC
T ss_pred EEECCCCh------HHHHHHHHHHHhcCCEEEEE
Confidence 88754321 245 7788999999998764
No 377
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.84 E-value=0.014 Score=50.69 Aligned_cols=94 Identities=10% Similarity=0.048 Sum_probs=61.4
Q ss_pred HcCCCCCCEEEEEcCC-cchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------cCC
Q 022836 58 RSRLEDGHTVLDVGCG-WGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------MEA 129 (291)
Q Consensus 58 ~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~~ 129 (291)
.... ++.+||-+|+| .|..+..+++.. ++ +|++++.+++.++.+++. .+ .++..+-.++. ...
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-----a~--~v~~~~~~~~~~~~~~~~~~ 230 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-----AD--RLVNPLEEDLLEVVRRVTGS 230 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-----CS--EEECTTTSCHHHHHHHHHSS
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-----HH--hccCcCccCHHHHHHHhcCC
Confidence 5566 89999999986 377778888766 77 899999998866655432 11 11111101110 023
Q ss_pred CccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 130 SYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 130 ~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
.+|+|+....- ...++...+.|+++|+++..
T Consensus 231 g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 231 GVEVLLEFSGN------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp CEEEEEECSCC------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCCC------HHHHHHHHHHHhcCCEEEEE
Confidence 68988865321 34577888999999988764
No 378
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.70 E-value=0.49 Score=40.40 Aligned_cols=95 Identities=16% Similarity=0.205 Sum_probs=61.6
Q ss_pred HHcCCCCCCEEEEEc-CC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC-CccC-CCcc
Q 022836 57 ERSRLEDGHTVLDVG-CG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FEME-ASYD 132 (291)
Q Consensus 57 ~~~~~~~~~~vLDiG-cG-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~~-~~~D 132 (291)
+.....++.+||=+| +| .|..+..+++.. +++|++++ +++..+.+ ++.|.+. .+..+-.+ +... ..+|
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~----~~lGa~~--~i~~~~~~~~~~~~~g~D 217 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFL----KALGAEQ--CINYHEEDFLLAISTPVD 217 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHH----HHHTCSE--EEETTTSCHHHHCCSCEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHH----HHcCCCE--EEeCCCcchhhhhccCCC
Confidence 667788999999996 54 688888888876 88999997 45434443 4456532 22221111 1111 5689
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 133 ~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+|+-.-. -. .+....++|+++|+++..
T Consensus 218 ~v~d~~g------~~-~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 218 AVIDLVG------GD-VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEESSC------HH-HHHHHGGGEEEEEEEEEC
T ss_pred EEEECCC------cH-HHHHHHHhccCCCEEEEe
Confidence 8876422 12 237788999999998763
No 379
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.68 E-value=0.15 Score=44.57 Aligned_cols=98 Identities=21% Similarity=0.266 Sum_probs=61.0
Q ss_pred HHcCCC-CCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEc-cccCCc-cCCCcc
Q 022836 57 ERSRLE-DGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVA-DISTFE-MEASYD 132 (291)
Q Consensus 57 ~~~~~~-~~~~vLDiGcG-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~-d~~~~~-~~~~~D 132 (291)
...... ++.+||-+|+| .|..+..+++.. +++|++++.+++..+.+++ ..|.+ .++.. +..... ..+.+|
T Consensus 180 ~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~---~lGa~--~v~~~~~~~~~~~~~~~~D 253 (366)
T 1yqd_A 180 KYFGLDEPGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALK---NFGAD--SFLVSRDQEQMQAAAGTLD 253 (366)
T ss_dssp HHTTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHH---TSCCS--EEEETTCHHHHHHTTTCEE
T ss_pred HhcCcCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH---hcCCc--eEEeccCHHHHHHhhCCCC
Confidence 445666 89999999986 366777777766 7899999999886655442 33432 12211 110111 114689
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 133 ~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+|+....... .++...+.|+++|+++..
T Consensus 254 ~vid~~g~~~------~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 254 GIIDTVSAVH------PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EEEECCSSCC------CSHHHHHHEEEEEEEEEC
T ss_pred EEEECCCcHH------HHHHHHHHHhcCCEEEEE
Confidence 9886543211 234566788999998764
No 380
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.51 E-value=1 Score=37.06 Aligned_cols=75 Identities=13% Similarity=0.173 Sum_probs=55.0
Q ss_pred CCCEEEEEcCC----cch-HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------
Q 022836 63 DGHTVLDVGCG----WGS-LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------- 127 (291)
Q Consensus 63 ~~~~vLDiGcG----~G~-~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---------- 127 (291)
.++++|=-|++ -|. .+..|++. |++|+.++.+++..+.+.+..++.+-.++.++.+|+.+...
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 47889988853 332 45566655 89999999999888877777766554578899999987421
Q ss_pred C-CCccEEEEccc
Q 022836 128 E-ASYDRIYSIEM 139 (291)
Q Consensus 128 ~-~~~D~i~~~~~ 139 (291)
. ++.|+++.+..
T Consensus 83 ~~G~iD~lvnnAg 95 (256)
T 4fs3_A 83 DVGNIDGVYHSIA 95 (256)
T ss_dssp HHCCCSEEEECCC
T ss_pred HhCCCCEEEeccc
Confidence 1 67999988754
No 381
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=93.47 E-value=0.053 Score=46.64 Aligned_cols=96 Identities=16% Similarity=0.203 Sum_probs=61.3
Q ss_pred HcCCCCCC-EEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccc-cC-C-c-cCCC
Q 022836 58 RSRLEDGH-TVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI-ST-F-E-MEAS 130 (291)
Q Consensus 58 ~~~~~~~~-~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~-~-~-~~~~ 130 (291)
+....++. +||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|.+.+ +-..+. .+ . . ....
T Consensus 143 ~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~----lGa~~~-i~~~~~~~~~~~~~~~~~ 216 (328)
T 1xa0_A 143 EHGLTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRV----LGAKEV-LAREDVMAERIRPLDKQR 216 (328)
T ss_dssp HTTCCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHH----TTCSEE-EECC---------CCSCC
T ss_pred hcCCCCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH----cCCcEE-EecCCcHHHHHHHhcCCc
Confidence 45667775 8999997 5788888888776 7899999999887666543 454221 111111 11 0 0 1146
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+|+|+-...- ..++...++|+++|++++.
T Consensus 217 ~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 217 WAAAVDPVGG-------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp EEEEEECSTT-------TTHHHHHHTEEEEEEEEEC
T ss_pred ccEEEECCcH-------HHHHHHHHhhccCCEEEEE
Confidence 8988764321 2467778899999998764
No 382
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=93.42 E-value=0.24 Score=37.49 Aligned_cols=114 Identities=15% Similarity=0.076 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc
Q 022836 47 AEKAMLELYCERSRLEDGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE 126 (291)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 126 (291)
+|+..++..++.....+| -|||+|-|.|..=..|.+.+|+.+|+++|-.-.. ....-.+.-.++.+|+.+..
T Consensus 25 aQR~~L~~a~~~v~~~~G-pVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~-------hp~~~P~~e~~ilGdi~~tL 96 (174)
T 3iht_A 25 SQRACLEHAIAQTAGLSG-PVYELGLGNGRTYHHLRQHVQGREIYVFERAVAS-------HPDSTPPEAQLILGDIRETL 96 (174)
T ss_dssp HHHHHHHHHHHHTTTCCS-CEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCC-------CGGGCCCGGGEEESCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCC-ceEEecCCCChhHHHHHHhCCCCcEEEEEeeecc-------CCCCCCchHheecccHHHHH
Confidence 445556667776665555 8999999999999999999999999999942211 00011122357778777642
Q ss_pred c------CCCccEEEEcccccccc-c---HHHHHHHHHhccccCeeEEEEee
Q 022836 127 M------EASYDRIYSIEMFEHMK-N---YQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 127 ~------~~~~D~i~~~~~l~~~~-~---~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
. ..+.-++.+..-.+.-. | ...+-.-+..+|.|||.++-..+
T Consensus 97 ~~~~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~p 148 (174)
T 3iht_A 97 PATLERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDR 148 (174)
T ss_dssp HHHHHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred HHHHHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCc
Confidence 1 12333333332222111 1 12233446788999999876444
No 383
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=93.39 E-value=0.2 Score=45.30 Aligned_cols=94 Identities=14% Similarity=0.151 Sum_probs=63.4
Q ss_pred cCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-----------
Q 022836 59 SRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF----------- 125 (291)
Q Consensus 59 ~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----------- 125 (291)
...+++.+||=+|+ |.|..+..+++.. ++++++++.+++.++.+++ .|.+. ++...-.++
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~d~~~~~~~~~~~~ 296 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRA----MGAEA--IIDRNAEGYRFWKDENTQDP 296 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCCE--EEETTTTTCCSEEETTEECH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHh----hCCcE--EEecCcCcccccccccccch
Confidence 46788999999997 4688888888776 8899999998887666643 45421 121111110
Q ss_pred -------------ccCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 126 -------------EMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 126 -------------~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
.....+|+|+-... . ..+....++|+++|.+++.
T Consensus 297 ~~~~~~~~~i~~~t~g~g~Dvvid~~G-----~--~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 297 KEWKRFGKRIRELTGGEDIDIVFEHPG-----R--ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEECSC-----H--HHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEcCC-----c--hhHHHHHHHhhCCcEEEEE
Confidence 01147898876422 1 4677888899999998774
No 384
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.31 E-value=0.075 Score=48.38 Aligned_cols=76 Identities=9% Similarity=-0.006 Sum_probs=54.4
Q ss_pred CCEEEEEcCCcchHHHHHHHHCCCC-EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---------------
Q 022836 64 GHTVLDVGCGWGSLSLYIAQKYSNC-KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--------------- 127 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~la~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--------------- 127 (291)
..+++|+-||.|+++.-+.+. |. .|.++|+++...+..+.+... .+...++.+|+.++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~--~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYC--DPATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCC--CTTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhccc--CCCcceeccchhhhhhccccccchhhHHhhh
Confidence 469999999999999998765 54 478999999977666655421 1234567788876541
Q ss_pred --C-CCccEEEEccccccc
Q 022836 128 --E-ASYDRIYSIEMFEHM 143 (291)
Q Consensus 128 --~-~~~D~i~~~~~l~~~ 143 (291)
. ..+|+++...+...+
T Consensus 164 ~~~~~~~Dvl~gGpPCQ~F 182 (482)
T 3me5_A 164 RQHIPEHDVLLAGFPCQPF 182 (482)
T ss_dssp HHHSCCCSEEEEECCCCCC
T ss_pred hhcCCCCCEEEecCCCcch
Confidence 1 468999987765544
No 385
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.29 E-value=0.094 Score=45.95 Aligned_cols=99 Identities=12% Similarity=0.133 Sum_probs=56.7
Q ss_pred CCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022836 63 DGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 63 ~~~~vLDiGcG-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~l 140 (291)
++.+|+=+|+| .|..+..++... |++|+++|.+++..+.+.+.... .+.....+..++... ..+|+|+.....
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGS----RVELLYSNSAEIETAVAEADLLIGAVLV 240 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGG----GSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhhCc----eeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence 35899999996 344445555555 77999999999877666543321 232222222221111 468999876543
Q ss_pred cccccHHHHHHHHHhccccCeeEEEE
Q 022836 141 EHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
.....+.-+.+...+.|+|||+++..
T Consensus 241 ~~~~~~~li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 241 PGRRAPILVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp TTSSCCCCBCHHHHTTSCTTCEEEET
T ss_pred CCCCCCeecCHHHHhhCCCCCEEEEE
Confidence 22111111134456788999987653
No 386
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=93.21 E-value=1.1 Score=37.24 Aligned_cols=102 Identities=10% Similarity=0.064 Sum_probs=66.3
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCC------------HHHHHHHHHHHHHhCCCCeEEEEccccCCcc
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNS------------KTQKEFIEEQCRVLELQNVEIIVADISTFEM 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s------------~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 127 (291)
.++++|=-|++.|. ++..|++. +++|+.+|.+ ...++.+.......+. ++.++.+|+.+...
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEccCCCHHH
Confidence 46788888876552 44445544 8899999987 6666655555555543 78999999988531
Q ss_pred C-----------CCccEEEEccccccc------ccH-----------HHHHHHHHhccccCeeEEEEe
Q 022836 128 E-----------ASYDRIYSIEMFEHM------KNY-----------QNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 128 ~-----------~~~D~i~~~~~l~~~------~~~-----------~~~l~~~~~~LkpgG~l~~~~ 167 (291)
- ++.|+++.+...... .++ -.+.+.+.+.++.+|.++...
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 0 478999987654221 111 235566777777888776543
No 387
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=93.19 E-value=0.76 Score=38.81 Aligned_cols=76 Identities=14% Similarity=0.137 Sum_probs=55.4
Q ss_pred CCCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC----------
Q 022836 62 EDGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME---------- 128 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~---------- 128 (291)
..+++||=.|++.|. ++..|+++ +.+|++++.++..++.+.+.....+. ++.++.+|+.+...-
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARR--GARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHh
Confidence 357789988877552 44444544 88999999999988877777666554 789999999885310
Q ss_pred -CCccEEEEcccc
Q 022836 129 -ASYDRIYSIEMF 140 (291)
Q Consensus 129 -~~~D~i~~~~~l 140 (291)
+..|+++.+...
T Consensus 106 ~g~id~lvnnAg~ 118 (301)
T 3tjr_A 106 LGGVDVVFSNAGI 118 (301)
T ss_dssp HSSCSEEEECCCC
T ss_pred CCCCCEEEECCCc
Confidence 378999987654
No 388
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=93.16 E-value=0.79 Score=38.45 Aligned_cols=76 Identities=12% Similarity=0.092 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC-cc---------C-
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF-EM---------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~~---------~- 128 (291)
.+++||=.|++.|. ++..|+++ +++|++++.++...+.+.+.....+..++.++.+|+.+. .. .
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSN--GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 46678877766442 34444443 889999999998777766666555545799999999886 21 0
Q ss_pred -CCccEEEEcccc
Q 022836 129 -ASYDRIYSIEMF 140 (291)
Q Consensus 129 -~~~D~i~~~~~l 140 (291)
+..|++|.+...
T Consensus 89 ~g~iD~lv~nAg~ 101 (311)
T 3o26_A 89 FGKLDILVNNAGV 101 (311)
T ss_dssp HSSCCEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 478999987754
No 389
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=93.14 E-value=0.97 Score=37.17 Aligned_cols=76 Identities=18% Similarity=0.166 Sum_probs=54.9
Q ss_pred CCCEEEEEcC-Ccch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C
Q 022836 63 DGHTVLDVGC-GWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGc-G~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~ 128 (291)
.++++|=.|+ |.|. ++..|+++ +++|+.++.++...+...+.....+..++.++.+|+.+... .
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 4678888887 5442 45555655 88999999999887777766655544579999999988531 0
Q ss_pred -CCccEEEEcccc
Q 022836 129 -ASYDRIYSIEMF 140 (291)
Q Consensus 129 -~~~D~i~~~~~l 140 (291)
++.|+++.+...
T Consensus 99 ~g~id~li~~Ag~ 111 (266)
T 3o38_A 99 AGRLDVLVNNAGL 111 (266)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCcEEEECCCc
Confidence 478999987654
No 390
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.00 E-value=0.095 Score=46.22 Aligned_cols=100 Identities=13% Similarity=0.093 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022836 63 DGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 63 ~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~l 140 (291)
++.+|+=+|+|. |......+... |++|+++|.+++..+.+.+. .+. .+.....+..++... ..+|+|+.....
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~---~g~-~~~~~~~~~~~l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAE---FCG-RIHTRYSSAYELEGAVKRADLVIGAVLV 241 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH---TTT-SSEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHh---cCC-eeEeccCCHHHHHHHHcCCCEEEECCCc
Confidence 578999999963 44444444445 78999999999866555432 232 222221111111111 467999874322
Q ss_pred cccccHHHHHHHHHhccccCeeEEEEe
Q 022836 141 EHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
.......-+.+...+.+||||+++...
T Consensus 242 p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 242 PGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp TTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 111111112455677899999876543
No 391
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=92.92 E-value=0.43 Score=42.65 Aligned_cols=46 Identities=15% Similarity=0.083 Sum_probs=35.3
Q ss_pred CCEEEEEcCCcchHHHHHHHHC----C-CCEEEEEcCCHHHHHHHHHHHHH
Q 022836 64 GHTVLDVGCGWGSLSLYIAQKY----S-NCKITGICNSKTQKEFIEEQCRV 109 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~la~~~----~-~~~v~~vD~s~~~~~~a~~~~~~ 109 (291)
..+|+|+|.|.|.++.-+.+.. + ..+++.||+|+...+.-+++...
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 4799999999999877775432 1 24899999999987776666654
No 392
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=92.85 E-value=0.11 Score=49.72 Aligned_cols=104 Identities=9% Similarity=0.100 Sum_probs=65.3
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHC-------CC-----CEEEEEcC---CHHHHHHHHH-----------HHHHh-----
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKY-------SN-----CKITGICN---SKTQKEFIEE-----------QCRVL----- 110 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~-------~~-----~~v~~vD~---s~~~~~~a~~-----------~~~~~----- 110 (291)
.+..+|+|+|.|+|.....+.+.+ |. .+++.+|. +.+.+..+.. .....
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 345799999999999877765532 21 57899998 4444433221 11111
Q ss_pred CC------C---CeEEEEccccCCcc------CCCccEEEEccccccc-cc--HHHHHHHHHhccccCeeEEE
Q 022836 111 EL------Q---NVEIIVADISTFEM------EASYDRIYSIEMFEHM-KN--YQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 111 ~~------~---~v~~~~~d~~~~~~------~~~~D~i~~~~~l~~~-~~--~~~~l~~~~~~LkpgG~l~~ 165 (291)
|+ + .+++..+|+.+... ...+|.++....-... ++ ...++..+.++++|||.+..
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 10 1 36677888866322 2579999986532111 11 26789999999999998764
No 393
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.85 E-value=2.1 Score=35.88 Aligned_cols=103 Identities=12% Similarity=0.107 Sum_probs=66.5
Q ss_pred CCCCEEEEEcCCcc-----hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---------
Q 022836 62 EDGHTVLDVGCGWG-----SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM--------- 127 (291)
Q Consensus 62 ~~~~~vLDiGcG~G-----~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--------- 127 (291)
..++++|=.|++.| .++..|++. +++|+.++.++...+.+.+.....+ ++.++.+|+.+...
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHH
Confidence 35779999997633 245555555 8899999998765555555444443 68889999988531
Q ss_pred --CCCccEEEEcccccc----------c--cc-----------HHHHHHHHHhccccCeeEEEEee
Q 022836 128 --EASYDRIYSIEMFEH----------M--KN-----------YQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 128 --~~~~D~i~~~~~l~~----------~--~~-----------~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
-+..|++|.+..+.. . .+ .-.+.+.+.+.++.+|.++....
T Consensus 105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 047899998765432 1 11 12355666677777888776543
No 394
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.83 E-value=0.13 Score=45.19 Aligned_cols=99 Identities=14% Similarity=0.164 Sum_probs=54.3
Q ss_pred CCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022836 63 DGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 63 ~~~~vLDiGcG-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~l 140 (291)
++.+|+=+|+| .|......+... |++|+++|.+++..+.+.+. .+. .+.....+..++... ..+|+|+.....
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~---~g~-~~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDV---FGG-RVITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH---TTT-SEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHh---cCc-eEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 46899999985 233344444444 78999999999866554332 232 222222222221111 468999876544
Q ss_pred cccccHHHHHHHHHhccccCeeEEEE
Q 022836 141 EHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
.......-+.+...+.++|||.++..
T Consensus 240 ~~~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp ------CCSCHHHHTTSCTTCEEEEC
T ss_pred CccccchhHHHHHHHhhcCCCEEEEE
Confidence 21111111245677888999987653
No 395
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.76 E-value=0.2 Score=43.04 Aligned_cols=96 Identities=14% Similarity=0.236 Sum_probs=62.1
Q ss_pred HcCCCCCC-EEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccc-cC-Cc--cCCC
Q 022836 58 RSRLEDGH-TVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADI-ST-FE--MEAS 130 (291)
Q Consensus 58 ~~~~~~~~-~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~-~~--~~~~ 130 (291)
+....++. +||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|.+.+ +-..+. .+ .. ....
T Consensus 144 ~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~----lGa~~v-~~~~~~~~~~~~~~~~~~ 217 (330)
T 1tt7_A 144 QNGLSPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQ----LGASEV-ISREDVYDGTLKALSKQQ 217 (330)
T ss_dssp HTTCCGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHH----HTCSEE-EEHHHHCSSCCCSSCCCC
T ss_pred hcCcCCCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCcEE-EECCCchHHHHHHhhcCC
Confidence 34567775 8999997 4677888888765 7899999998887666543 454221 111111 11 11 1146
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+|+|+-... . ..+....++|+++|++++.
T Consensus 218 ~d~vid~~g-----~--~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 218 WQGAVDPVG-----G--KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp EEEEEESCC-----T--HHHHHHHTTEEEEEEEEEC
T ss_pred ccEEEECCc-----H--HHHHHHHHhhcCCCEEEEE
Confidence 888875432 2 3577888999999998764
No 396
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.64 E-value=0.079 Score=46.64 Aligned_cols=95 Identities=14% Similarity=0.151 Sum_probs=55.9
Q ss_pred CCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcc--------------------
Q 022836 63 DGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVAD-------------------- 121 (291)
Q Consensus 63 ~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d-------------------- 121 (291)
++.+|+=+|+|. |..+..++... |++|+++|.++...+.+.+ .|. +++..+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~----lGa---~~~~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL-GAKTTGYDVRPEVAEQVRS----VGA---QWLDLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHHH----TTC---EECCCC-------------CHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCC---eEEeccccccccccchhhhhHHHHhh
Confidence 678999999984 55555555555 8899999999986655543 232 222211
Q ss_pred -ccCCccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEE
Q 022836 122 -ISTFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 122 -~~~~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 165 (291)
...+... ...|+|+..-....-+.+.-+-+.+.+.+|||++++=
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVD 300 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVD 300 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEE
T ss_pred hHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEE
Confidence 0011111 6789999753221111111123567888999887654
No 397
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.57 E-value=0.092 Score=45.24 Aligned_cols=56 Identities=20% Similarity=0.205 Sum_probs=43.1
Q ss_pred CeEEEEccccCC-c-c-CCCccEEEEccccccc--------------ccHHHHHHHHHhccccCeeEEEEeec
Q 022836 114 NVEIIVADISTF-E-M-EASYDRIYSIEMFEHM--------------KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 114 ~v~~~~~d~~~~-~-~-~~~~D~i~~~~~l~~~--------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
+..++++|..+. . . .+++|+|++..++... ......+..+.++|+|||.+++....
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 578889998763 2 2 3789999999987543 23677889999999999999886543
No 398
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=92.31 E-value=0.94 Score=39.23 Aligned_cols=97 Identities=10% Similarity=0.200 Sum_probs=56.2
Q ss_pred cCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEE-cCCHHHHHHHHHHHHHhCCCCeEEEEc------cccCCccC-
Q 022836 59 SRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGI-CNSKTQKEFIEEQCRVLELQNVEIIVA------DISTFEME- 128 (291)
Q Consensus 59 ~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~v-D~s~~~~~~a~~~~~~~~~~~v~~~~~------d~~~~~~~- 128 (291)
....++.+||=+|+ |.|.++..+++.. +++++++ +.++.. +...+.+++.|.+. ++.. ++.+....
T Consensus 163 ~~~~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~-~~~~~~~~~lGa~~--vi~~~~~~~~~~~~~~~~~ 238 (357)
T 1zsy_A 163 EQLQPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDI-QKLSDRLKSLGAEH--VITEEELRRPEMKNFFKDM 238 (357)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCH-HHHHHHHHHTTCSE--EEEHHHHHSGGGGGTTSSS
T ss_pred hccCCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccch-HHHHHHHHhcCCcE--EEecCcchHHHHHHHHhCC
Confidence 46788999999997 4788888888876 7766554 443321 11123344556532 2221 11111111
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
..+|+|+-.-. . .. .....++|+++|++++.
T Consensus 239 ~~~Dvvid~~g-----~-~~-~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 239 PQPRLALNCVG-----G-KS-STELLRQLARGGTMVTY 269 (357)
T ss_dssp CCCSEEEESSC-----H-HH-HHHHHTTSCTTCEEEEC
T ss_pred CCceEEEECCC-----c-HH-HHHHHHhhCCCCEEEEE
Confidence 24898875421 1 12 23567999999998764
No 399
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=92.29 E-value=1.6 Score=36.51 Aligned_cols=102 Identities=14% Similarity=0.170 Sum_probs=63.5
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHH-HHHHHHHHHHHhCCCCeEEEEccccCCcc----------C
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKT-QKEFIEEQCRVLELQNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~-~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~ 128 (291)
.++++|=.|++.|. ++..|++. +++|+.++.+.. ..+...+..+..+. ++.++.+|+.+... .
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46788888876552 34444544 889999998765 33333344444443 78999999988431 0
Q ss_pred -CCccEEEEcccccc----c-----cc-----------HHHHHHHHHhccccCeeEEEEe
Q 022836 129 -ASYDRIYSIEMFEH----M-----KN-----------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 -~~~D~i~~~~~l~~----~-----~~-----------~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
+..|+++.+..... + ++ .-.+++.+.+.++.+|.++...
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 47899998753321 1 11 1235666777888888776643
No 400
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=92.19 E-value=0.19 Score=47.75 Aligned_cols=103 Identities=13% Similarity=0.147 Sum_probs=65.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC-------C---C--CEEEEEcC---CHHHHHHHHH-----------HHHHhCC----
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY-------S---N--CKITGICN---SKTQKEFIEE-----------QCRVLEL---- 112 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~-------~---~--~~v~~vD~---s~~~~~~a~~-----------~~~~~~~---- 112 (291)
+.-+|||+|-|+|.......+.+ | . .+++++|. +++.+..+.. .......
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 45699999999998776665432 2 1 46899998 7776663332 1111110
Q ss_pred ----------CCeEEEEccccCCcc------CCCccEEEEccccccc-cc--HHHHHHHHHhccccCeeEEE
Q 022836 113 ----------QNVEIIVADISTFEM------EASYDRIYSIEMFEHM-KN--YQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 113 ----------~~v~~~~~d~~~~~~------~~~~D~i~~~~~l~~~-~~--~~~~l~~~~~~LkpgG~l~~ 165 (291)
-.+++..+|+.+... ...+|+|+....-... ++ ...++..+.++++|||.+..
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 024566677765321 2579999986522211 22 26789999999999998765
No 401
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=92.11 E-value=0.77 Score=37.68 Aligned_cols=103 Identities=13% Similarity=0.090 Sum_probs=64.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC---CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-----------
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY---SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~----------- 128 (291)
.+++||=.| |+|.++..+++.+ .+.+|++++.++...+...+.....+. ++.++.+|+.+...-
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 356777666 4565555554432 278999999998776666655555443 688999999874310
Q ss_pred CCccEEEEccccccc--------cc-----------HHHHHHHHHhccccCeeEEEEe
Q 022836 129 ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~--------~~-----------~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
+..|+|+.+...... .+ ...+++.+.+.++++|.+++..
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 378999876543211 11 1235556667777777766643
No 402
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=92.08 E-value=0.21 Score=43.77 Aligned_cols=93 Identities=17% Similarity=0.220 Sum_probs=58.7
Q ss_pred CCCCCEEEEEc-C-CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc---cC-CCccEE
Q 022836 61 LEDGHTVLDVG-C-GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE---ME-ASYDRI 134 (291)
Q Consensus 61 ~~~~~~vLDiG-c-G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~~-~~~D~i 134 (291)
..++.+||=.| + |.|..+..+++.. +++|++++ +++..+.+ ++.|.+. .+..+-.++. .. ..+|+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~----~~lGa~~--v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELV----RKLGADD--VIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHH----HHTTCSE--EEETTSSCHHHHHHTSCCBSEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHH----HHcCCCE--EEECCchHHHHHHhhcCCCCEE
Confidence 67899999999 3 4688888888776 78999998 66655444 3445421 2211111111 11 468998
Q ss_pred EEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 135 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 135 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+-...- ....+....++|+++|+++..
T Consensus 253 id~~g~-----~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 253 LDNVGG-----STETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp EESSCT-----THHHHGGGGBCSSSCCEEEES
T ss_pred EECCCC-----hhhhhHHHHHhhcCCcEEEEe
Confidence 864322 123456677899999998763
No 403
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=92.06 E-value=0.54 Score=42.17 Aligned_cols=96 Identities=13% Similarity=0.103 Sum_probs=63.3
Q ss_pred cCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCe-EEEEccccC-----------
Q 022836 59 SRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNV-EIIVADIST----------- 124 (291)
Q Consensus 59 ~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v-~~~~~d~~~----------- 124 (291)
....++.+||=.|+ |.|..+..+++.. ++++++++.+++.++.++ +.|.+.+ .....|+.+
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~----~lGa~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVR----ALGCDLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HTTCCCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH----hcCCCEEEecccccccccccccccccch
Confidence 56788999999997 3677888888776 889999999988766654 3454221 111112100
Q ss_pred --------Cc--cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 125 --------FE--MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 125 --------~~--~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+. ....+|+|+-+..- ..++...++|+++|.+++.
T Consensus 291 ~~~~~~~~v~~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 291 TGRKLAKLVVEKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEES
T ss_pred hhhHHHHHHHHHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEEE
Confidence 00 02468998865322 3567788899999998774
No 404
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.04 E-value=0.41 Score=41.85 Aligned_cols=91 Identities=7% Similarity=-0.033 Sum_probs=59.1
Q ss_pred CCCCEEEEEcC-C-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------cCCCccE
Q 022836 62 EDGHTVLDVGC-G-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------MEASYDR 133 (291)
Q Consensus 62 ~~~~~vLDiGc-G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~~~~D~ 133 (291)
.++.+||=+|+ | .|..+..+++.. +++|+++. +++..+.++ +.|.+ .++...-.++. ..+.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~----~lGa~--~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAK----SRGAE--EVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHH----HTTCS--EEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHH----HcCCc--EEEECCCchHHHHHHHHccCCccE
Confidence 78899999998 3 788999999876 88999885 777655443 45542 22222111111 1245898
Q ss_pred EEEcccccccccHHHHHHHHHhcc-ccCeeEEEE
Q 022836 134 IYSIEMFEHMKNYQNLLKKISKWM-KEDTLLFVH 166 (291)
Q Consensus 134 i~~~~~l~~~~~~~~~l~~~~~~L-kpgG~l~~~ 166 (291)
|+-.-.- ...++.+.+.| +++|+++..
T Consensus 235 v~d~~g~------~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 235 ALDCITN------VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEESSCS------HHHHHHHHHHSCTTCEEEEES
T ss_pred EEECCCc------hHHHHHHHHHhhcCCCEEEEE
Confidence 8864221 34567777888 699998764
No 405
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.97 E-value=0.93 Score=37.20 Aligned_cols=99 Identities=11% Similarity=0.191 Sum_probs=63.8
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---------C--
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------E-- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---------~-- 128 (291)
.++++|=.|++.|. ++..|++. +++|+.++.+++.++...+.. + .++.++.+|+.+... .
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEG--GAEVLLTGRNESNIARIREEF---G-PRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH---G-GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh---C-CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 46788888876553 34444544 889999999988765554433 2 268899999988531 1
Q ss_pred CCccEEEEccccccc--------ccH-----------HHHHHHHHhccccCeeEEEEe
Q 022836 129 ASYDRIYSIEMFEHM--------KNY-----------QNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~--------~~~-----------~~~l~~~~~~LkpgG~l~~~~ 167 (291)
++.|+++.+...... .+. -.+.+.+.+.++++|.++...
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 478999887643221 111 224556667777788776644
No 406
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.94 E-value=1 Score=33.09 Aligned_cols=67 Identities=12% Similarity=0.190 Sum_probs=44.0
Q ss_pred CCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----C-CCccEEEE
Q 022836 64 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----E-ASYDRIYS 136 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----~-~~~D~i~~ 136 (291)
..+|+=+|||. .+..+++.. .+.+|+++|.+++.++.+++ . .+.++.+|..+... . ..+|+|++
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~---~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLED----E---GFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T---TCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C---CCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 45899999864 444433321 27899999999987655443 2 35778888877421 1 56898887
Q ss_pred ccc
Q 022836 137 IEM 139 (291)
Q Consensus 137 ~~~ 139 (291)
...
T Consensus 77 ~~~ 79 (141)
T 3llv_A 77 TGS 79 (141)
T ss_dssp CCS
T ss_pred ecC
Confidence 543
No 407
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=91.87 E-value=1.8 Score=35.65 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcC-CHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICN-SKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~-s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~ 128 (291)
.++++|=.|++.|. ++..|++. +++|+.++. +....+...+..+..+. ++.++.+|+.+... .
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRL--GAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888776542 34444544 889998775 45555555555555554 78899999988531 0
Q ss_pred -CCccEEEEccccccc--------cc-----------HHHHHHHHHhccccCeeEEEEee
Q 022836 129 -ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 129 -~~~D~i~~~~~l~~~--------~~-----------~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
++.|+++.+...... .+ .-.+.+.+.+.++++|.+++...
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 478999977644221 11 12355667777888888766543
No 408
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=91.76 E-value=1.5 Score=36.28 Aligned_cols=75 Identities=13% Similarity=0.011 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----------cC-
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----------ME- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----------~~- 128 (291)
.++++|=-|++.|. .+..|++. |++|..+|.+++.++.+.+.....+. ++.++.+|+.+.. ..
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAA--GARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 47777777776653 44555554 89999999999988888777777665 7888899998742 11
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
++.|+++.+.-.
T Consensus 85 G~iDiLVNNAG~ 96 (255)
T 4g81_D 85 IHVDILINNAGI 96 (255)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 678999987643
No 409
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=91.74 E-value=2.1 Score=35.97 Aligned_cols=102 Identities=17% Similarity=0.206 Sum_probs=66.0
Q ss_pred CCCEEEEEcCCc-ch----HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------
Q 022836 63 DGHTVLDVGCGW-GS----LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------- 127 (291)
Q Consensus 63 ~~~~vLDiGcG~-G~----~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---------- 127 (291)
.++++|=.|++. .. ++..|++. +++|+.++.++...+.+.+.....+ ++.++.+|+.+...
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLAESLG--VKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHHT--CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHH
Confidence 467899998753 22 45555554 8899999998876655555555444 46888999988531
Q ss_pred C-CCccEEEEcccccc----------c--cc-----------HHHHHHHHHhccccCeeEEEEee
Q 022836 128 E-ASYDRIYSIEMFEH----------M--KN-----------YQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 128 ~-~~~D~i~~~~~l~~----------~--~~-----------~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
. +..|+++.+..+.. . .+ .-.+.+.+.+.++.+|.++....
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 0 47899998764432 1 11 12355566777777888776543
No 410
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=91.72 E-value=1.8 Score=36.31 Aligned_cols=103 Identities=7% Similarity=0.054 Sum_probs=64.4
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCC--HHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNS--KTQKEFIEEQCRVLELQNVEIIVADISTFEM---------- 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---------- 127 (291)
.++++|=.|++.|. ++..|++. +++|+.++.+ ....+...+.....+. ++.++.+|+.+...
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTC-CEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCC-cEEEEEecCCCHHHHHHHHHHHHH
Confidence 46788888876542 34444544 8899999886 3344444444444443 78899999987431
Q ss_pred C-CCccEEEEcccccc----c-----cc-----------HHHHHHHHHhccccCeeEEEEee
Q 022836 128 E-ASYDRIYSIEMFEH----M-----KN-----------YQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 128 ~-~~~D~i~~~~~l~~----~-----~~-----------~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
. +..|+++.+..... + ++ .-.+.+.+.+.++++|.++....
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 0 47899998765422 1 11 12355667777888888766543
No 411
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.72 E-value=0.12 Score=45.79 Aligned_cols=95 Identities=13% Similarity=0.168 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcccc------------------
Q 022836 63 DGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS------------------ 123 (291)
Q Consensus 63 ~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~------------------ 123 (291)
++.+|+=+|+|. |..+..++... |++|+++|.++...+.+.+ .|. +++..+..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~----~G~---~~~~~~~~~~~d~~~~~~ya~e~s~~ 260 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVAS----LGA---KFIAVEDEEFKAAETAGGYAKEMSGE 260 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHH----TTC---EECCCCC-----------------CH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH----cCC---ceeecccccccccccccchhhhcchh
Confidence 578999999994 55566666665 8899999999986555543 232 22221110
Q ss_pred -------CCccC-CCccEEEEcccccccccHHHHHHHHHhccccCeeEEE
Q 022836 124 -------TFEME-ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 124 -------~~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 165 (291)
.+... ...|+|+.......-+.+.-+-+.+.+.+|||.+++=
T Consensus 261 ~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVD 310 (405)
T 4dio_A 261 YQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVD 310 (405)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEE
T ss_pred hhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEE
Confidence 00001 4689998753222111111123578888999987654
No 412
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=91.67 E-value=4.6 Score=34.70 Aligned_cols=105 Identities=11% Similarity=0.081 Sum_probs=70.9
Q ss_pred CCCEEEEEcCCcchHHHHHHHH-CCCCEEEEEcCCHHHHHHHHHHHHHh-----------------------CCCCeEEE
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQK-YSNCKITGICNSKTQKEFIEEQCRVL-----------------------ELQNVEII 118 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~-----------------------~~~~v~~~ 118 (291)
+...|+-||||.-.....+... .++.+++=||. |+.++.=++.+... .-++..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4679999999998888887754 24678999998 66665544444321 02467899
Q ss_pred EccccCCc----------cC-CCccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEeec
Q 022836 119 VADISTFE----------ME-ASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 119 ~~d~~~~~----------~~-~~~D~i~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
.+|+.+.. .+ ...-++++-.++.++ .....+++.+.+... +|.+++..+.
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~-~~~~i~yE~i 231 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFE-RAMFINYEQV 231 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCS-SEEEEEEEEC
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCC-CceEEEEecc
Confidence 99997731 12 344688888899998 356778888887665 4554444443
No 413
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.47 E-value=2.4 Score=34.94 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=54.8
Q ss_pred CEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccccc
Q 022836 65 HTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFEH 142 (291)
Q Consensus 65 ~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~l~~ 142 (291)
++||=.|| |.++..+++.. .+.+|++++-++....... . .+++++.+|+.++. -..+|+|+.......
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~---~~~~~~~~D~~d~~-~~~~d~vi~~a~~~~ 75 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----A---SGAEPLLWPGEEPS-LDGVTHLLISTAPDS 75 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----H---TTEEEEESSSSCCC-CTTCCEEEECCCCBT
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----h---CCCeEEEecccccc-cCCCCEEEECCCccc
Confidence 68999995 87777776543 3689999999887543322 1 26899999999866 567899998765543
Q ss_pred ccc--HHHHHHHHHh
Q 022836 143 MKN--YQNLLKKISK 155 (291)
Q Consensus 143 ~~~--~~~~l~~~~~ 155 (291)
..+ ...+++.+.+
T Consensus 76 ~~~~~~~~l~~a~~~ 90 (286)
T 3ius_A 76 GGDPVLAALGDQIAA 90 (286)
T ss_dssp TBCHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHh
Confidence 322 2344444444
No 414
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=91.44 E-value=2.4 Score=35.01 Aligned_cols=102 Identities=12% Similarity=0.077 Sum_probs=64.2
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCC-HHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNS-KTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s-~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~ 128 (291)
.++++|=.|++.|. ++..|++. |++|+.++.+ ....+...+.....+. ++.++.+|+.+... .
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALE--GAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46789988876553 44455544 8899988644 4545545555555443 78899999988531 0
Q ss_pred -CCccEEEEccccccc--------cc-----------HHHHHHHHHhccccCeeEEEEe
Q 022836 129 -ASYDRIYSIEMFEHM--------KN-----------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 -~~~D~i~~~~~l~~~--------~~-----------~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
++.|+++.+...... .+ .-.+++.+.+.|+++|.+++..
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 478999987643221 11 1235566677788888776643
No 415
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.35 E-value=0.53 Score=41.96 Aligned_cols=93 Identities=12% Similarity=0.142 Sum_probs=59.5
Q ss_pred CCEEEEEcCCc-chH-HHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----cC-CCccEEEE
Q 022836 64 GHTVLDVGCGW-GSL-SLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----ME-ASYDRIYS 136 (291)
Q Consensus 64 ~~~vLDiGcG~-G~~-~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~-~~~D~i~~ 136 (291)
..+|+=+|+|. |.. +..|.+. +..|+++|.+++.++.+++ . .+.++.+|..+.. .. ..+|+|++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~--g~~vvvId~d~~~v~~~~~----~---g~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS--GVKMVVLDHDPDHIETLRK----F---GMKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEECCHHHHHHHHH----T---TCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHh----C---CCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 45788888863 332 2223322 7899999999998776653 3 3557889998853 12 67898887
Q ss_pred cccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 137 IEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 137 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
...- ......+....+.+.|+..+++-..
T Consensus 75 ~~~~---~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 75 AIDD---PQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp CCSS---HHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CCCC---hHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 5322 1233445556667788877776544
No 416
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=91.30 E-value=3.6 Score=33.76 Aligned_cols=76 Identities=8% Similarity=-0.049 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH-hCCCCeEEEEccccCCcc----------C
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV-LELQNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~v~~~~~d~~~~~~----------~ 128 (291)
.++++|=.|++.|. ++..|++. +++|+.++.+++..+.+.+.... .+..++.++.+|+.+... .
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEA--GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 46788888876552 44445544 88999999999887777666655 333358899999988531 0
Q ss_pred -CCccEEEEcccc
Q 022836 129 -ASYDRIYSIEMF 140 (291)
Q Consensus 129 -~~~D~i~~~~~l 140 (291)
++.|+++.+...
T Consensus 85 ~g~id~lvnnAg~ 97 (265)
T 3lf2_A 85 LGCASILVNNAGQ 97 (265)
T ss_dssp HCSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 478999987654
No 417
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=91.28 E-value=0.42 Score=41.58 Aligned_cols=98 Identities=10% Similarity=0.134 Sum_probs=58.6
Q ss_pred cCCCCC-CEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEE------ccccC-Cc--
Q 022836 59 SRLEDG-HTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIV------ADIST-FE-- 126 (291)
Q Consensus 59 ~~~~~~-~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~------~d~~~-~~-- 126 (291)
...+++ .+||=+|+ |.|..+..+++.. +++++++..+++..+..++.+++.|.+. ++. .|+.+ +.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~--vi~~~~~~~~~~~~~i~~~ 238 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGATQ--VITEDQNNSREFGPTIKEW 238 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTCSE--EEEHHHHHCGGGHHHHHHH
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCccccHHHHHHHHhcCCeE--EEecCccchHHHHHHHHHH
Confidence 367788 99999986 4678888888776 7888888755543211223334556532 221 11111 00
Q ss_pred ---cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 127 ---MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 127 ---~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
....+|+|+-.-.- .... ...++|+++|+++..
T Consensus 239 t~~~~~g~Dvvid~~G~------~~~~-~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 239 IKQSGGEAKLALNCVGG------KSST-GIARKLNNNGLMLTY 274 (364)
T ss_dssp HHHHTCCEEEEEESSCH------HHHH-HHHHTSCTTCEEEEC
T ss_pred hhccCCCceEEEECCCc------hhHH-HHHHHhccCCEEEEe
Confidence 12468988864221 2233 567999999998764
No 418
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=91.28 E-value=2.5 Score=35.95 Aligned_cols=76 Identities=13% Similarity=0.050 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc-----------
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM----------- 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~----------- 127 (291)
.+++||=.|++.|. ++..|+++ |.+|++++.++...+.+.+.....+. .++.++.+|+.+...
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQ--GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 46788888876553 34444444 88999999999888777776665554 268899999988531
Q ss_pred CCCccEEEEcccc
Q 022836 128 EASYDRIYSIEMF 140 (291)
Q Consensus 128 ~~~~D~i~~~~~l 140 (291)
.+..|+++.+...
T Consensus 85 ~g~id~lv~nAg~ 97 (319)
T 3ioy_A 85 FGPVSILCNNAGV 97 (319)
T ss_dssp TCCEEEEEECCCC
T ss_pred CCCCCEEEECCCc
Confidence 0468999987654
No 419
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.24 E-value=1.6 Score=37.18 Aligned_cols=88 Identities=22% Similarity=0.231 Sum_probs=56.9
Q ss_pred CCEEEEEcCCc--chHHHHHHHHCCCC--EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccC-CccCCCccEEEEcc
Q 022836 64 GHTVLDVGCGW--GSLSLYIAQKYSNC--KITGICNSKTQKEFIEEQCRVLELQNVEIIVADIST-FEMEASYDRIYSIE 138 (291)
Q Consensus 64 ~~~vLDiGcG~--G~~~~~la~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~D~i~~~~ 138 (291)
.++|.=||+|. +.++..+.+. +. +|+++|.+++.++.+. +.|. +.-...|..+ .. ...|+|+..-
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~--G~~~~V~~~dr~~~~~~~a~----~~G~--~~~~~~~~~~~~~--~~aDvVilav 102 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAV----DLGI--IDEGTTSIAKVED--FSPDFVMLSS 102 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHH----HTTS--CSEEESCTTGGGG--GCCSEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC--CCCCEEEEEECCHHHHHHHH----HCCC--cchhcCCHHHHhh--ccCCEEEEeC
Confidence 46899999884 2345555554 55 9999999998765543 3443 1112234333 21 4679999875
Q ss_pred cccccccHHHHHHHHHhccccCeeEE
Q 022836 139 MFEHMKNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 139 ~l~~~~~~~~~l~~~~~~LkpgG~l~ 164 (291)
... ....+++.+...++||.+++
T Consensus 103 p~~---~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 103 PVR---TFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp CGG---GHHHHHHHHHHHSCTTCEEE
T ss_pred CHH---HHHHHHHHHhhccCCCcEEE
Confidence 553 34677888888898887654
No 420
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.07 E-value=0.89 Score=41.44 Aligned_cols=90 Identities=13% Similarity=0.033 Sum_probs=56.0
Q ss_pred CCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccc
Q 022836 61 LEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEM 139 (291)
Q Consensus 61 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~ 139 (291)
..++.+|+=+|+|. |......++.+ +++|+++|.++...+.++ ..|. ++ .++.+.. ...|+|+....
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~----~~Ga---~~--~~l~e~l--~~aDvVi~atg 338 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAM----MEGF---DV--VTVEEAI--GDADIVVTATG 338 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHH----HTTC---EE--CCHHHHG--GGCSEEEECSS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH----HcCC---EE--ecHHHHH--hCCCEEEECCC
Confidence 46789999999973 44444445455 789999999998654443 3443 22 2332221 46899998643
Q ss_pred ccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 140 FEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
-.++-+ ....+.|||||+++...
T Consensus 339 t~~~i~-----~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 339 NKDIIM-----LEHIKAMKDHAILGNIG 361 (494)
T ss_dssp SSCSBC-----HHHHHHSCTTCEEEECS
T ss_pred CHHHHH-----HHHHHhcCCCcEEEEeC
Confidence 322211 24556789999886643
No 421
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.97 E-value=0.2 Score=44.15 Aligned_cols=40 Identities=20% Similarity=0.218 Sum_probs=30.2
Q ss_pred CCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHH
Q 022836 63 DGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFI 103 (291)
Q Consensus 63 ~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a 103 (291)
++.+|+=+|+|. |..+..+++.. +++|+++|.++...+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQV 211 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 688999999984 55555666666 78999999998755444
No 422
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=90.85 E-value=1.1 Score=36.81 Aligned_cols=102 Identities=12% Similarity=0.040 Sum_probs=63.5
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEE-cCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGI-CNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~v-D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~ 128 (291)
.++++|=.|++.|. ++..|+++ |++|+.+ +.+....+...+.....+. ++.++.+|+.+... .
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQE--GANVVLTYNGAAEGAATAVAEIEKLGR-SALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSSCHHHHHHHHHHHTTTS-CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888876553 44445544 8899888 6666665555555554443 68899999988531 0
Q ss_pred -CCccEEEEccccc-c------c--cc-----------HHHHHHHHHhccccCeeEEEEe
Q 022836 129 -ASYDRIYSIEMFE-H------M--KN-----------YQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 -~~~D~i~~~~~l~-~------~--~~-----------~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
++.|+++.+.... . . ++ .-.+.+.+.+.++++|.++...
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 4789999876332 1 1 11 1234556666777777766543
No 423
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=90.78 E-value=2.2 Score=35.49 Aligned_cols=75 Identities=12% Similarity=0.050 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcC-CHHHHHHHHHHHHHhCCCCeEEEEccccCCccC----------
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICN-SKTQKEFIEEQCRVLELQNVEIIVADISTFEME---------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~-s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~---------- 128 (291)
.++++|=.|++.|. ++..|++. +++|+.++. +++..+...+.....+. ++.++.+|+.+...-
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAAS--GFDIAITGIGDAEGVAPVIAELSGLGA-RVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCHHHHHHHHHHHHHTTC-CEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 46788888876552 44445544 889999995 67666665555555554 789999999885311
Q ss_pred -CCccEEEEcccc
Q 022836 129 -ASYDRIYSIEMF 140 (291)
Q Consensus 129 -~~~D~i~~~~~l 140 (291)
++.|+++.+...
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 378999987654
No 424
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=90.74 E-value=2.5 Score=34.90 Aligned_cols=102 Identities=10% Similarity=0.083 Sum_probs=64.1
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEE-cCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGI-CNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~v-D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~ 128 (291)
.++++|=-|++.|. ++..|++. |++|+.+ ..++...+...+.....+. ++.++.+|+.+... .
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASD--GFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHH--TCEEEEEESSCSHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888876653 45556666 8888887 4455555555555555543 78899999988531 0
Q ss_pred -CCccEEEEccccccc--------ccH-----------HHHHHHHHhccccCeeEEEEe
Q 022836 129 -ASYDRIYSIEMFEHM--------KNY-----------QNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 -~~~D~i~~~~~l~~~--------~~~-----------~~~l~~~~~~LkpgG~l~~~~ 167 (291)
++.|+++.+...... .+. -.+++.+.+.++++|.++...
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 478999987644221 111 224556667777788876644
No 425
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=90.57 E-value=3.2 Score=34.24 Aligned_cols=77 Identities=16% Similarity=0.180 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCccC-----------
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEME----------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~----------- 128 (291)
.++++|=.|++ |.++..+++.+ .+++|++++.++...+...+.....+. .++.++.+|+.+...-
T Consensus 31 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 45688888765 44444444321 278999999998877666655555553 3578889999875310
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
+..|+|+.+...
T Consensus 110 g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 110 SGVDICINNAGL 121 (279)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999987643
No 426
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.52 E-value=3.7 Score=29.55 Aligned_cols=90 Identities=13% Similarity=0.094 Sum_probs=51.0
Q ss_pred CCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----c-CCCccEEEE
Q 022836 64 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----M-EASYDRIYS 136 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~-~~~~D~i~~ 136 (291)
+++|+=+|+| ..+..+++.. .+.+|+++|.+++.++...+ .. .+.++.+|..+.. . ...+|+|+.
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~~---~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASA---EI---DALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HC---SSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---hc---CcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 4689999886 3333333221 27899999999886544332 11 3456677765431 1 156899888
Q ss_pred cccccccccHHHHHHHHHhccccCeeEEE
Q 022836 137 IEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 137 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 165 (291)
..... .....+..+.+.++++ .+++
T Consensus 76 ~~~~~---~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 76 VTGKE---EVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp CCSCH---HHHHHHHHHHHHTTCC-CEEE
T ss_pred eeCCc---hHHHHHHHHHHHcCCC-EEEE
Confidence 64321 2233444555557775 4444
No 427
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.49 E-value=2.9 Score=34.61 Aligned_cols=76 Identities=12% Similarity=0.053 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcC-------------CHHHHHHHHHHHHHhCCCCeEEEEccccCC
Q 022836 62 EDGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICN-------------SKTQKEFIEEQCRVLELQNVEIIVADISTF 125 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~-------------s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 125 (291)
..++++|=.|++.|. ++..|++. +++|+++|. +++.++...+.....+. ++.++.+|+.+.
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~ 89 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLDVRDD 89 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTCH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcCCCCH
Confidence 356788888876553 44455544 889999997 66766666665555553 788999999874
Q ss_pred cc----------C-CCccEEEEcccc
Q 022836 126 EM----------E-ASYDRIYSIEMF 140 (291)
Q Consensus 126 ~~----------~-~~~D~i~~~~~l 140 (291)
.. . ++.|+++.+...
T Consensus 90 ~~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 90 AALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 31 0 478999987644
No 428
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=90.20 E-value=1.6 Score=35.84 Aligned_cols=76 Identities=20% Similarity=0.116 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcC-CHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-----------
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICN-SKTQKEFIEEQCRVLELQNVEIIVADISTFEME----------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~-s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~----------- 128 (291)
.+++||=.|+ +|.++..+++.+ .+.+|++++. ++...+...+.....+. ++.++.+|+.+...-
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4668886665 455555554432 2789999988 77766555555544443 688899999874310
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
+..|+++.+...
T Consensus 98 ~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 98 GGLDFVMSNSGM 109 (274)
T ss_dssp SCEEEEECCCCC
T ss_pred CCCCEEEECCCC
Confidence 378999876543
No 429
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=90.19 E-value=0.92 Score=44.98 Aligned_cols=74 Identities=14% Similarity=0.071 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCC--EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC---------------
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNC--KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF--------------- 125 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--------------- 125 (291)
...+++||-||.|+++.-+.+. |. .+.++|+++...+..+.|. ++..++..|+.++
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~A--G~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQA--GISDTLWAIEMWDPAAQAFRLNN-----PGSTVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHH--TSEEEEEEECSSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CCCeEEEeccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC-----CCCccccccHHHHhhhccchhhhhhhhh
Confidence 4579999999999999998876 64 5779999999766655543 2455666665321
Q ss_pred --ccCCCccEEEEccccccc
Q 022836 126 --EMEASYDRIYSIEMFEHM 143 (291)
Q Consensus 126 --~~~~~~D~i~~~~~l~~~ 143 (291)
+..+.+|+|+...+-..+
T Consensus 612 ~lp~~~~vDll~GGpPCQ~F 631 (1002)
T 3swr_A 612 RLPQKGDVEMLCGGPPCQGF 631 (1002)
T ss_dssp BCCCTTTCSEEEECCCCTTC
T ss_pred hcccCCCeeEEEEcCCCcch
Confidence 112578999987755443
No 430
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.94 E-value=0.8 Score=34.40 Aligned_cols=94 Identities=14% Similarity=0.203 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----c-CCCccEEE
Q 022836 62 EDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----M-EASYDRIY 135 (291)
Q Consensus 62 ~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~-~~~~D~i~ 135 (291)
.++.+|+=+|||. |......+... +.+|+++|.+++.++.+++ .. .+.++.+|..+.. . ...+|+|+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~---~~---g~~~~~~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNS---EF---SGFTVVGDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCT---TC---CSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHh---cC---CCcEEEecCCCHHHHHHcCcccCCEEE
Confidence 4678999999864 33322222233 7899999999875433220 11 3456667754421 1 14689888
Q ss_pred EcccccccccHHHHHHHHHhccccCeeEEE
Q 022836 136 SIEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 136 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 165 (291)
....- ......+..+.+.+.|...++.
T Consensus 90 ~~~~~---~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 90 AFTND---DSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp ECSSC---HHHHHHHHHHHHHTSCCSEEEE
T ss_pred EEeCC---cHHHHHHHHHHHHHCCCCeEEE
Confidence 75432 1223333444444555555544
No 431
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=89.91 E-value=3.7 Score=34.76 Aligned_cols=75 Identities=16% Similarity=0.117 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCC------------HHHHHHHHHHHHHhCCCCeEEEEccccCCcc
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNS------------KTQKEFIEEQCRVLELQNVEIIVADISTFEM 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s------------~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 127 (291)
.++++|=-|++.|. ++..|++. |++|+++|.+ ++.++...+.....+. ++.++.+|+.+...
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQD--GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR-RIIARQADVRDLAS 121 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHH
Confidence 46788877776552 44445544 8899999876 5555555555555554 78999999987431
Q ss_pred ----------C-CCccEEEEcccc
Q 022836 128 ----------E-ASYDRIYSIEMF 140 (291)
Q Consensus 128 ----------~-~~~D~i~~~~~l 140 (291)
. ++.|++|.+...
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 0 478999987644
No 432
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=89.86 E-value=3.8 Score=33.81 Aligned_cols=75 Identities=15% Similarity=0.158 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcC-------------CHHHHHHHHHHHHHhCCCCeEEEEccccCCc
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICN-------------SKTQKEFIEEQCRVLELQNVEIIVADISTFE 126 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~-------------s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 126 (291)
.++++|=.|++.|. .+..|++. +++|+++|. +++.++...+.....+. ++.++.+|+.+..
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~ 86 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVDTRDFD 86 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHH
Confidence 46788888876553 44455544 889999997 56666655555555443 7889999998853
Q ss_pred c----------C-CCccEEEEcccc
Q 022836 127 M----------E-ASYDRIYSIEMF 140 (291)
Q Consensus 127 ~----------~-~~~D~i~~~~~l 140 (291)
. . ++.|+++.+...
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 1 0 468999987644
No 433
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.82 E-value=0.2 Score=44.57 Aligned_cols=40 Identities=18% Similarity=0.214 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHH
Q 022836 63 DGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFI 103 (291)
Q Consensus 63 ~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a 103 (291)
++.+|+=+|+|. |..+..++... |++|+++|.++...+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence 578999999984 55556666666 78999999999865554
No 434
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=89.81 E-value=2.5 Score=34.81 Aligned_cols=75 Identities=12% Similarity=0.138 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH-hCCCCeEEEEccccCCccC----------
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV-LELQNVEIIVADISTFEME---------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~v~~~~~d~~~~~~~---------- 128 (291)
.++++|=-|++.|. ++..|++. +++|+.++.+++..+.+.+.... .+. ++.++.+|+.+...-
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAA--GARLVLSGRDVSELDAARRALGEQFGT-DVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 46688877766542 34444444 88999999998887776665554 343 789999999886410
Q ss_pred -CCccEEEEcccc
Q 022836 129 -ASYDRIYSIEMF 140 (291)
Q Consensus 129 -~~~D~i~~~~~l 140 (291)
+..|+++.+...
T Consensus 96 ~g~id~lv~nAg~ 108 (266)
T 4egf_A 96 FGGLDVLVNNAGI 108 (266)
T ss_dssp HTSCSEEEEECCC
T ss_pred cCCCCEEEECCCc
Confidence 478999987643
No 435
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=89.56 E-value=6.2 Score=33.19 Aligned_cols=79 Identities=15% Similarity=0.156 Sum_probs=49.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEE-EccccCCccC----CCccEE
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEII-VADISTFEME----ASYDRI 134 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~-~~d~~~~~~~----~~~D~i 134 (291)
.++++||=.|+ +|.++..+++.+ .+.+|++++.++...+...+........++.++ .+|+.+...- ..+|+|
T Consensus 9 ~~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 9 PEGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 45678998875 455555554432 278999999887765544433322211368888 7898874321 468999
Q ss_pred EEccccc
Q 022836 135 YSIEMFE 141 (291)
Q Consensus 135 ~~~~~l~ 141 (291)
+.+....
T Consensus 88 ih~A~~~ 94 (342)
T 1y1p_A 88 AHIASVV 94 (342)
T ss_dssp EECCCCC
T ss_pred EEeCCCC
Confidence 9876543
No 436
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=89.34 E-value=3.2 Score=34.57 Aligned_cols=98 Identities=11% Similarity=0.056 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~- 128 (291)
.++.+|=-|++.|. .+..|++. |++|+.+|.+++.++.+.+ +.+. ++..+.+|+.+... .
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~--Ga~V~i~~r~~~~l~~~~~---~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAE--GARVFITGRRKDVLDAAIA---EIGG-GAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH---HHCT-TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH---HcCC-CeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 57788888877663 45555555 8999999999987665543 3343 67788999987531 1
Q ss_pred CCccEEEEccccccc--------ccH-----------HHHHHHHHhccccCeeEEEE
Q 022836 129 ASYDRIYSIEMFEHM--------KNY-----------QNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~--------~~~-----------~~~l~~~~~~LkpgG~l~~~ 166 (291)
++.|+++.+.-.... +++ -.+.+.+.+.|+.+|.++..
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 678999887643221 111 23455667778888876554
No 437
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=89.16 E-value=2.2 Score=41.24 Aligned_cols=46 Identities=13% Similarity=0.016 Sum_probs=34.4
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHC----CC-CEEEEEcCCHHHHHHHHHHH
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKY----SN-CKITGICNSKTQKEFIEEQC 107 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~----~~-~~v~~vD~s~~~~~~a~~~~ 107 (291)
....+|+||-||.|+++.-+.+.. .. ..+.++|+++.+++.-+.|.
T Consensus 210 ~k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 210 TRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp CEEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 345799999999999988886541 00 25679999999877766653
No 438
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.01 E-value=2.3 Score=31.60 Aligned_cols=95 Identities=15% Similarity=0.140 Sum_probs=55.8
Q ss_pred CCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCC-HHHHHHHHHHHHHhCCCCeEEEEccccCCc----cC-CCccEEE
Q 022836 64 GHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNS-KTQKEFIEEQCRVLELQNVEIIVADISTFE----ME-ASYDRIY 135 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s-~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~-~~~D~i~ 135 (291)
..+|+=+|+ |..+..+++.. .+.+|+++|.+ ++..+...+. .. ..+.++.+|..+.. .. ..+|+|+
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~---~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR---LG-DNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH---HC-TTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHh---hc-CCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 357887876 45555544332 27899999997 4433333221 11 24788899987642 11 6789888
Q ss_pred EcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 136 SIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 136 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
+...- ......+....+.+.|...++...
T Consensus 77 ~~~~~---d~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 77 ALSDN---DADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp ECSSC---HHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred EecCC---hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 76432 123445555666677777766633
No 439
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.01 E-value=2 Score=34.13 Aligned_cols=89 Identities=16% Similarity=0.129 Sum_probs=54.2
Q ss_pred EEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----C-CCccEEEEcc
Q 022836 66 TVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----E-ASYDRIYSIE 138 (291)
Q Consensus 66 ~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----~-~~~D~i~~~~ 138 (291)
+|+=+|+ |..+..+++.. .+.+|+++|.+++.++...+ .. ++.++.+|..+... . ..+|+|++..
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~---~~---~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK---KL---KATIIHGDGSHKEILRDAEVSKNDVVVILT 73 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---HS---SSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---Hc---CCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence 5677776 55555554432 27899999999987654332 12 46788999887421 1 5789988753
Q ss_pred cccccccHHHHHHHHHhccccCeeEEE
Q 022836 139 MFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 139 ~l~~~~~~~~~l~~~~~~LkpgG~l~~ 165 (291)
.- ......+..+.+.+.|...++.
T Consensus 74 ~~---d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 74 PR---DEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp SC---HHHHHHHHHHHHHTSCCCEEEE
T ss_pred CC---cHHHHHHHHHHHHHcCCCeEEE
Confidence 32 1223445555555666666554
No 440
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=88.97 E-value=2.1 Score=35.36 Aligned_cols=74 Identities=16% Similarity=0.141 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~- 128 (291)
.++.+|=-|++.|. .+..|++. |++|..+|.+++.++...+..+..+. ++.++.+|+.+... .
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46788888877664 45555554 89999999999998888887777765 78899999988531 1
Q ss_pred CCccEEEEccc
Q 022836 129 ASYDRIYSIEM 139 (291)
Q Consensus 129 ~~~D~i~~~~~ 139 (291)
++.|+++.+.-
T Consensus 83 G~iDiLVNNAG 93 (254)
T 4fn4_A 83 SRIDVLCNNAG 93 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 68999998763
No 441
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=88.92 E-value=0.68 Score=38.68 Aligned_cols=88 Identities=13% Similarity=0.051 Sum_probs=51.9
Q ss_pred CCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEE---------E-EccccCCccCCCccEEEEcccc-
Q 022836 72 CGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEI---------I-VADISTFEMEASYDRIYSIEMF- 140 (291)
Q Consensus 72 cG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~---------~-~~d~~~~~~~~~~D~i~~~~~l- 140 (291)
++.|.....+. +.+|.+|..||-.-.. .-++|++ . .+|+.+....+++|+|+++..-
T Consensus 150 ~~~~~~~~~~~-k~~g~~vl~v~~~~~~-----------p~k~v~wi~Pi~GAt~~~~lDfg~p~~~~k~DvV~SDMApn 217 (320)
T 2hwk_A 150 HPQSDFSSFVS-KLKGRTVLVVGEKLSV-----------PGKMVDWLSDRPEATFRARLDLGIPGDVPKYDIIFVNVRTP 217 (320)
T ss_dssp CCCCCCHHHHH-TSSCSEEEEEESCCCC-----------TTSEEEEEESSTTCSEECCGGGCSCTTSCCEEEEEEECCCC
T ss_pred cCCCCHHHHHh-hCCCcEEEEEeccccc-----------CCceeEeeccCCCceeecccccCCccccCcCCEEEEcCCCC
Confidence 34455554444 5568888888521110 0013433 3 4565554333779999997643
Q ss_pred ---cc-c--ccHH----HHHHHHHhccccCeeEEEEeeccC
Q 022836 141 ---EH-M--KNYQ----NLLKKISKWMKEDTLLFVHHFCHK 171 (291)
Q Consensus 141 ---~~-~--~~~~----~~l~~~~~~LkpgG~l~~~~~~~~ 171 (291)
++ - .|.. -++....++|+|||.+++..+...
T Consensus 218 ~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga 258 (320)
T 2hwk_A 218 YKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA 258 (320)
T ss_dssp CCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC
T ss_pred CCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 22 1 2222 256677899999999999877654
No 442
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=88.78 E-value=4.3 Score=33.20 Aligned_cols=77 Identities=13% Similarity=0.056 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhC-CCCeEEEEccccCCccC----------
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLE-LQNVEIIVADISTFEME---------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~v~~~~~d~~~~~~~---------- 128 (291)
.++++|=.|++.|. ++..|++. +++|++++.++...+...+...... ..++.++.+|+.+...-
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 35688888865442 33444444 8899999998876554443332211 12588899999874210
Q ss_pred -CCccEEEEccccc
Q 022836 129 -ASYDRIYSIEMFE 141 (291)
Q Consensus 129 -~~~D~i~~~~~l~ 141 (291)
++.|+++.+....
T Consensus 84 ~g~id~lv~~Ag~~ 97 (267)
T 2gdz_A 84 FGRLDILVNNAGVN 97 (267)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 3679999877543
No 443
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=88.77 E-value=2.6 Score=34.81 Aligned_cols=76 Identities=13% Similarity=0.117 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCC------------HHHHHHHHHHHHHhCCCCeEEEEccccCCcc
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNS------------KTQKEFIEEQCRVLELQNVEIIVADISTFEM 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s------------~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 127 (291)
.++++|=.|++.|. ++..|++. +++|+++|.+ ++.++...+.....+. ++.++.+|+.+...
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRDRES 88 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTCHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCCHHH
Confidence 46788888876542 44445544 8899999976 6666655555555554 79999999987531
Q ss_pred ----------C-CCccEEEEccccc
Q 022836 128 ----------E-ASYDRIYSIEMFE 141 (291)
Q Consensus 128 ----------~-~~~D~i~~~~~l~ 141 (291)
. ++.|+++.+..+.
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 0 4789999877543
No 444
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=88.63 E-value=4.9 Score=32.79 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEE-cCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGI-CNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~--~~~~v~~v-D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~- 128 (291)
.++++|=-|++. .++..+++.+ .+++|+.+ +.++...+...+.....+. ++.++.+|+.+... .
T Consensus 3 ~~k~vlVTGas~-gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSR-GVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 356777777654 4444443321 28898886 8888777666666555443 78999999988531 0
Q ss_pred CCccEEEEccc
Q 022836 129 ASYDRIYSIEM 139 (291)
Q Consensus 129 ~~~D~i~~~~~ 139 (291)
++.|+++.+..
T Consensus 81 g~id~lv~nAg 91 (258)
T 3oid_A 81 GRLDVFVNNAA 91 (258)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46799998764
No 445
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=88.53 E-value=2.4 Score=34.79 Aligned_cols=103 Identities=12% Similarity=0.099 Sum_probs=61.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHH---HHHHHHHHHHHhCCCCeEEEEccccCCcc----------
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKT---QKEFIEEQCRVLELQNVEIIVADISTFEM---------- 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s~~---~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---------- 127 (291)
.++++|=.|++.| ++..+++.+ .+++|+.++.+.. ..+...+.....+. ++.++.+|+.+...
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA-KVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTC-EEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHH
Confidence 4678888877654 444444432 3789999876543 33333344443343 68899999988531
Q ss_pred C-CCccEEEEccccccc--------ccH-----------HHHHHHHHhccccCeeEEEEe
Q 022836 128 E-ASYDRIYSIEMFEHM--------KNY-----------QNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 128 ~-~~~D~i~~~~~l~~~--------~~~-----------~~~l~~~~~~LkpgG~l~~~~ 167 (291)
. ++.|+++.+...... .+. -.+.+.+.+.|+++|.+++..
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 0 478999987643221 111 224555666777788776643
No 446
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.50 E-value=2.4 Score=32.62 Aligned_cols=91 Identities=9% Similarity=-0.023 Sum_probs=51.6
Q ss_pred CCEEEEEcCCcchHHHHHHHHC--C-CCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc----c-C-CCccEE
Q 022836 64 GHTVLDVGCGWGSLSLYIAQKY--S-NCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE----M-E-ASYDRI 134 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~la~~~--~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~-~-~~~D~i 134 (291)
+.+|+=+|||. .+..+++.. . +.+|+++|.+++.++.++ ..| +.++.+|..+.. . . ..+|+|
T Consensus 39 ~~~v~IiG~G~--~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g---~~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLILGMGR--IGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG---RNVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp TCSEEEECCSH--HHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT---CCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CCcEEEECCCH--HHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC---CCEEEcCCCCHHHHHhccCCCCCCEE
Confidence 56899998863 333333221 2 578999999998665443 233 456677765421 1 2 568988
Q ss_pred EEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 135 YSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 135 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+....- ......+-...+.+.|++.++..
T Consensus 110 i~~~~~---~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 110 LLAMPH---HQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp EECCSS---HHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEeCCC---hHHHHHHHHHHHHHCCCCEEEEE
Confidence 874321 11122222344556677776654
No 447
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=88.24 E-value=4.3 Score=33.31 Aligned_cols=76 Identities=16% Similarity=0.101 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC-CCeEEEEccccCCcc-----C--CCc
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL-QNVEIIVADISTFEM-----E--ASY 131 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~-----~--~~~ 131 (291)
.++++|=.|++.|. ++..|++. +++|+.++.++...+...+.....+. ..+.++.+|+.+... . ++.
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 86 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAE--GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV 86 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence 46688877765442 34444444 88999999999887776666655432 357788899887421 1 578
Q ss_pred cEEEEcccc
Q 022836 132 DRIYSIEMF 140 (291)
Q Consensus 132 D~i~~~~~l 140 (291)
|+++.+...
T Consensus 87 d~lv~nAg~ 95 (267)
T 3t4x_A 87 DILINNLGI 95 (267)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999987644
No 448
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=88.18 E-value=4.9 Score=33.23 Aligned_cols=103 Identities=15% Similarity=0.181 Sum_probs=60.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHH-HHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQ-KEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s~~~-~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++ |.++..+++.+ .+++|++++.++.. .+.+.+.....+. ++.++.+|+.+... .
T Consensus 28 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 28 EGKVALVTGAG-RGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35677777765 44444444332 28899999877542 3333334444443 68889999887421 0
Q ss_pred CCccEEEEccccccc--------ccH-----------HHHHHHHHhccccCeeEEEEe
Q 022836 129 ASYDRIYSIEMFEHM--------KNY-----------QNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~--------~~~-----------~~~l~~~~~~LkpgG~l~~~~ 167 (291)
+..|+++.+...... .+. ..+++.+.+.|+.+|.++...
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 468999987644321 111 224456666676777766644
No 449
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=88.12 E-value=4.5 Score=32.99 Aligned_cols=106 Identities=18% Similarity=0.177 Sum_probs=65.1
Q ss_pred CCCCCEEEEEcCC-cchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------
Q 022836 61 LEDGHTVLDVGCG-WGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------- 127 (291)
Q Consensus 61 ~~~~~~vLDiGcG-~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---------- 127 (291)
..++++||=.|++ +|.++..+++.+ .+++|+.++.+....+.+.+.....+ ++.++.+|+.+...
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHHHHHH
Confidence 3467899999874 244444433321 28899999988665555555444433 57889999988531
Q ss_pred -CCCccEEEEcccccc-----------c--cc-----------HHHHHHHHHhccccCeeEEEEee
Q 022836 128 -EASYDRIYSIEMFEH-----------M--KN-----------YQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 128 -~~~~D~i~~~~~l~~-----------~--~~-----------~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
-++.|+++.+..+.. . .+ ...+.+.+.+.++++|.+++...
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 047899998764422 1 11 12345566677777787666443
No 450
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=87.90 E-value=5.5 Score=32.98 Aligned_cols=72 Identities=13% Similarity=0.174 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++.|. ++..|++. +++|+++|.+++..+...+.. +. ++.++.+|+.+... .
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADE--GCHVLCADIDGDAADAAATKI---GC-GAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHH---CS-SCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc---CC-cceEEEecCCCHHHHHHHHHHHHHHc
Confidence 46788887776552 44445544 889999999987655544332 33 68899999988531 0
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
+..|+++.+...
T Consensus 102 g~iD~lvnnAg~ 113 (277)
T 3gvc_A 102 GGVDKLVANAGV 113 (277)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999987654
No 451
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=87.84 E-value=3.8 Score=34.36 Aligned_cols=76 Identities=14% Similarity=0.186 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCC--CCeEEEEccccCCcc----------C
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLEL--QNVEIIVADISTFEM----------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~v~~~~~d~~~~~~----------~ 128 (291)
.++++|=.|++ |.++..+++.+ .+++|++++.+++..+...+.....+. .++.++.+|+.+... .
T Consensus 25 ~~k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITGSS-NGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 46678877765 44444444332 288999999998877666555544432 168889999987531 0
Q ss_pred -CCccEEEEccc
Q 022836 129 -ASYDRIYSIEM 139 (291)
Q Consensus 129 -~~~D~i~~~~~ 139 (291)
+..|+++.+..
T Consensus 104 ~g~iD~lvnnAG 115 (297)
T 1xhl_A 104 FGKIDILVNNAG 115 (297)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 37899998764
No 452
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.80 E-value=2.6 Score=35.43 Aligned_cols=88 Identities=13% Similarity=0.001 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEE-ccccCCccCCCccEEEEccc
Q 022836 62 EDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIV-ADISTFEMEASYDRIYSIEM 139 (291)
Q Consensus 62 ~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~-~d~~~~~~~~~~D~i~~~~~ 139 (291)
..+.+|+=+|+|. |......+..+ +.+|+++|.++...+.+ ...|. .... .++.+. -...|+|+..-+
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~----~~~g~---~~~~~~~l~~~--l~~aDvVi~~~p 222 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAAL-GAKVKVGARESDLLARI----AEMGM---EPFHISKAAQE--LRDVDVCINTIP 222 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHH----HHTTS---EEEEGGGHHHH--TTTCSEEEECCS
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHH----HHCCC---eecChhhHHHH--hcCCCEEEECCC
Confidence 4688999999873 33333333344 78999999998754332 23332 3321 122221 157899998776
Q ss_pred ccccccHHHHHHHHHhccccCeeEEE
Q 022836 140 FEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~LkpgG~l~~ 165 (291)
.+-+.. ...+.+|||++++-
T Consensus 223 ~~~i~~------~~l~~mk~~~~lin 242 (293)
T 3d4o_A 223 ALVVTA------NVLAEMPSHTFVID 242 (293)
T ss_dssp SCCBCH------HHHHHSCTTCEEEE
T ss_pred hHHhCH------HHHHhcCCCCEEEE
Confidence 643321 23456889887654
No 453
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=87.57 E-value=7.3 Score=35.05 Aligned_cols=95 Identities=12% Similarity=0.137 Sum_probs=58.9
Q ss_pred CCEEEEEcCCcch--HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHH-------hC------C-C-CeEEEEccccCCc
Q 022836 64 GHTVLDVGCGWGS--LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRV-------LE------L-Q-NVEIIVADISTFE 126 (291)
Q Consensus 64 ~~~vLDiGcG~G~--~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-------~~------~-~-~v~~~~~d~~~~~ 126 (291)
-.+|.-||+|.=+ ++..+++. +.+|+++|.+++.++.+++.... .+ . . ...+ ..|...
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~-- 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE-- 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG--
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH--
Confidence 3589999999633 44455543 78999999999988877653321 11 0 0 1222 344322
Q ss_pred cCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEE
Q 022836 127 MEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 127 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 165 (291)
-...|+|+..-. +...-...+++.+...++|+.+++.
T Consensus 112 -~~~aDlVIeaVp-e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 112 -LSTVDLVVEAVF-EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp -GTTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -HCCCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 156899887542 2222236788888888988876654
No 454
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=87.50 E-value=2.8 Score=34.59 Aligned_cols=75 Identities=19% Similarity=0.131 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc------------
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM------------ 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~------------ 127 (291)
.++++|=.|++.|. ++..|++. +++|++++.+++..+...+.....+. ++.++.+|+.+...
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788888865442 33444443 88999999998877666555554443 68889999987421
Q ss_pred CCCccEEEEcccc
Q 022836 128 EASYDRIYSIEMF 140 (291)
Q Consensus 128 ~~~~D~i~~~~~l 140 (291)
.+..|+++.+...
T Consensus 97 ~g~id~lv~nAg~ 109 (273)
T 1ae1_A 97 DGKLNILVNNAGV 109 (273)
T ss_dssp TSCCCEEEECCCC
T ss_pred CCCCcEEEECCCC
Confidence 1468999987644
No 455
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=87.36 E-value=3.5 Score=28.59 Aligned_cols=69 Identities=17% Similarity=0.141 Sum_probs=44.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CC-CEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----CCCccEEE
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY--SN-CKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----EASYDRIY 135 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~--~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----~~~~D~i~ 135 (291)
.+++|+=+|+ |..+..+++.. .+ .+|+++|.++...+... . .++.+...|+.+... -..+|+|+
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~---~~~~~~~~d~~~~~~~~~~~~~~d~vi 74 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R---MGVATKQVDAKDEAGLAKALGGFDAVI 74 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T---TTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h---CCCcEEEecCCCHHHHHHHHcCCCEEE
Confidence 3568999998 44444443321 25 78999999988654433 1 256778888776321 15789999
Q ss_pred Ecccc
Q 022836 136 SIEMF 140 (291)
Q Consensus 136 ~~~~l 140 (291)
.....
T Consensus 75 ~~~~~ 79 (118)
T 3ic5_A 75 SAAPF 79 (118)
T ss_dssp ECSCG
T ss_pred ECCCc
Confidence 87643
No 456
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=87.25 E-value=2.2 Score=30.12 Aligned_cols=77 Identities=17% Similarity=0.127 Sum_probs=45.3
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEccccc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMFE 141 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~l~ 141 (291)
+.++||=+ |+.|..+..++++ .++.+++.|+ .+........+.... ..||+|++.+=+.
T Consensus 5 ~~mkIlL~-C~aGmSTsllv~k------------------m~~~a~~~gi-~v~i~a~~~~~~~~~~~~~DvvLLgPQV~ 64 (108)
T 3nbm_A 5 KELKVLVL-CAGSGTSAQLANA------------------INEGANLTEV-RVIANSGAYGAHYDIMGVYDLIILAPQVR 64 (108)
T ss_dssp CCEEEEEE-ESSSSHHHHHHHH------------------HHHHHHHHTC-SEEEEEEETTSCTTTGGGCSEEEECGGGG
T ss_pred cCceEEEE-CCCCCCHHHHHHH------------------HHHHHHHCCC-ceEEEEcchHHHHhhccCCCEEEEChHHH
Confidence 45677755 6666666667665 4556666777 466655444444333 6799999975443
Q ss_pred ccccHHHHHHHHHhccccCeeEEE
Q 022836 142 HMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 142 ~~~~~~~~l~~~~~~LkpgG~l~~ 165 (291)
+. ++++.+...+.|+=+.
T Consensus 65 y~------~~~ik~~~~~~~ipV~ 82 (108)
T 3nbm_A 65 SY------YREMKVDAERLGIQIV 82 (108)
T ss_dssp GG------HHHHHHHHTTTTCEEE
T ss_pred HH------HHHHHHHhhhcCCcEE
Confidence 33 4445555556565333
No 457
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=86.97 E-value=5 Score=33.26 Aligned_cols=75 Identities=7% Similarity=0.065 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCH-HHHHHHHHHHH-HhCCCCeEEEEccccC----Ccc------
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSK-TQKEFIEEQCR-VLELQNVEIIVADIST----FEM------ 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~-~~~~~a~~~~~-~~~~~~v~~~~~d~~~----~~~------ 127 (291)
.++++|=.|++.|. ++..|++. +++|++++.++ +..+.+.+... ..+ .++.++.+|+.+ ...
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQT--GYRVVIHYHNSAEAAVSLADELNKERS-NTAVVCQADLTNSNVLPASCEEIIN 98 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHH--TCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhhcC-CceEEEEeecCCccCCHHHHHHHHH
Confidence 46678877766542 44455555 78999999887 65554444443 333 378899999988 320
Q ss_pred ----C-CCccEEEEcccc
Q 022836 128 ----E-ASYDRIYSIEMF 140 (291)
Q Consensus 128 ----~-~~~D~i~~~~~l 140 (291)
. +..|+++.+..+
T Consensus 99 ~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 99 SCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHhcCCCCEEEECCCC
Confidence 0 478999987643
No 458
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=86.96 E-value=0.23 Score=41.17 Aligned_cols=53 Identities=11% Similarity=0.053 Sum_probs=37.7
Q ss_pred eEEEEccccCCc---cCCCccEEEEccccccc--------------ccHHHHHHHHHhccccCeeEEEEe
Q 022836 115 VEIIVADISTFE---MEASYDRIYSIEMFEHM--------------KNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 115 v~~~~~d~~~~~---~~~~~D~i~~~~~l~~~--------------~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
..++++|..+.. ..+++|+|++..++..- ......++.+.++|+|||.+++..
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 346677775531 12689999998887533 134567888899999999998874
No 459
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=86.89 E-value=9.2 Score=31.85 Aligned_cols=90 Identities=19% Similarity=0.203 Sum_probs=54.1
Q ss_pred CEEEEEcCCc-ch-HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEE--------c---cccCCccC-CC
Q 022836 65 HTVLDVGCGW-GS-LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIV--------A---DISTFEME-AS 130 (291)
Q Consensus 65 ~~vLDiGcG~-G~-~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~--------~---d~~~~~~~-~~ 130 (291)
++|.=||+|. |. ++..|++. +.+|+++|.+++.++..++ .++ .... . +..+.... ..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRK----NGL---IADFNGEEVVANLPIFSPEEIDHQNEQ 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----HCE---EEEETTEEEEECCCEECGGGCCTTSCC
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHh----CCE---EEEeCCCeeEecceeecchhhcccCCC
Confidence 5899999984 32 34445443 6799999999886655433 232 1111 0 11111110 27
Q ss_pred ccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 131 YDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 131 ~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+|+|+..-.-. ....+++.+...++|+..++..
T Consensus 75 ~d~vi~~v~~~---~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 75 VDLIIALTKAQ---QLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CSEEEECSCHH---HHHHHHHHHGGGCCTTCEEEEC
T ss_pred CCEEEEEeccc---cHHHHHHHHHHhcCCCCEEEEe
Confidence 89998865432 3567888888888887765543
No 460
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=86.82 E-value=4.3 Score=33.71 Aligned_cols=84 Identities=13% Similarity=0.184 Sum_probs=52.8
Q ss_pred CEEEEEcC-Cc-ch-HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccccc
Q 022836 65 HTVLDVGC-GW-GS-LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFE 141 (291)
Q Consensus 65 ~~vLDiGc-G~-G~-~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~l~ 141 (291)
++|.=||+ |. |. ++..|++. +.+|+++|.+++..+.+.+ .|+ .. .+..+. -...|+|+..-.-.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~----~g~---~~--~~~~~~--~~~aDvVi~av~~~ 78 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQG----MGI---PL--TDGDGW--IDEADVVVLALPDN 78 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHH----TTC---CC--CCSSGG--GGTCSEEEECSCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHh----cCC---Cc--CCHHHH--hcCCCEEEEcCCch
Confidence 58999999 84 32 44445443 6799999999886655433 343 11 122221 15689998865443
Q ss_pred ccccHHHHHHHHHhccccCeeEE
Q 022836 142 HMKNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 142 ~~~~~~~~l~~~~~~LkpgG~l~ 164 (291)
....+++.+...++||..++
T Consensus 79 ---~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 79 ---IIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp ---HHHHHHHHHGGGSCTTCEEE
T ss_pred ---HHHHHHHHHHHhCCCCCEEE
Confidence 24677788888888876544
No 461
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=86.72 E-value=2.9 Score=34.10 Aligned_cols=76 Identities=16% Similarity=0.125 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-----------C-
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-----------~- 128 (291)
.++++|=.|++. .++..+++.+ .+++|++++.+++..+...+.....+. ++.++.+|+.+... -
T Consensus 8 ~~k~vlVTGas~-giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGGSR-GIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 467888777654 4444443321 288999999998876665555544443 68889999987421 0
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
+..|+++.+...
T Consensus 86 g~id~lv~~Ag~ 97 (260)
T 2ae2_A 86 GKLNILVNNAGI 97 (260)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999987643
No 462
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=86.69 E-value=0.42 Score=41.34 Aligned_cols=95 Identities=16% Similarity=0.128 Sum_probs=55.8
Q ss_pred HHcCCCCCCEEEEEcC--CcchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCc------cC
Q 022836 57 ERSRLEDGHTVLDVGC--GWGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFE------ME 128 (291)
Q Consensus 57 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~ 128 (291)
+....+++.+||=.|+ |.|..+..+++...+.+|++++ ++...+.+ + .|.+ .++. +-.++. ..
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~----~-~ga~--~~~~-~~~~~~~~~~~~~~ 206 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAI----K-DSVT--HLFD-RNADYVQEVKRISA 206 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHH----G-GGSS--EEEE-TTSCHHHHHHHHCT
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHH----H-cCCc--EEEc-CCccHHHHHHHhcC
Confidence 4457789999999998 3577777887665457899988 45433332 2 3442 1222 111111 12
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEe
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
+.+|+|+-.-.- ..++...++|+++|++++..
T Consensus 207 ~g~Dvv~d~~g~-------~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 207 EGVDIVLDCLCG-------DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp TCEEEEEEECC--------------CTTEEEEEEEEEEC
T ss_pred CCceEEEECCCc-------hhHHHHHHHhhcCCEEEEEC
Confidence 569988864221 12366789999999988754
No 463
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=86.65 E-value=2.9 Score=35.68 Aligned_cols=95 Identities=14% Similarity=0.096 Sum_probs=59.4
Q ss_pred CEEEEEcCCc--chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHH-------HhCC-C----------CeEEEEccccC
Q 022836 65 HTVLDVGCGW--GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCR-------VLEL-Q----------NVEIIVADIST 124 (291)
Q Consensus 65 ~~vLDiGcG~--G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~-------~~~~-~----------~v~~~~~d~~~ 124 (291)
.+|-=||+|. +.++..+++. |.+|+++|.+++.++.+.+... ..|+ + ++.+. .|..+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~e 83 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAE 83 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHH
Confidence 5888999985 2345555554 7899999999999888765432 1232 1 23332 23322
Q ss_pred CccCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEE
Q 022836 125 FEMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 125 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 165 (291)
. -...|+|+..-+ +...-...+++++...++|+.+++.
T Consensus 84 a--v~~aDlVieavp-e~~~~k~~v~~~l~~~~~~~~Ii~s 121 (319)
T 2dpo_A 84 A--VEGVVHIQECVP-ENLDLKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp H--TTTEEEEEECCC-SCHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred H--HhcCCEEEEecc-CCHHHHHHHHHHHHhhCCCCeEEEE
Confidence 1 156798887532 1122235688899999998886553
No 464
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=86.64 E-value=3.4 Score=34.76 Aligned_cols=88 Identities=14% Similarity=0.055 Sum_probs=52.2
Q ss_pred CCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEE-ccccCCccCCCccEEEEccc
Q 022836 62 EDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIV-ADISTFEMEASYDRIYSIEM 139 (291)
Q Consensus 62 ~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~-~d~~~~~~~~~~D~i~~~~~ 139 (291)
..+++|+=+|+|. |......+..+ +.+|+++|.++...+.+. ..+. .... .++.+. -...|+|+..-.
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~----~~g~---~~~~~~~l~~~--l~~aDvVi~~~p 224 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAAL-GANVKVGARSSAHLARIT----EMGL---VPFHTDELKEH--VKDIDICINTIP 224 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHH----HTTC---EEEEGGGHHHH--STTCSEEEECCS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH----HCCC---eEEchhhHHHH--hhCCCEEEECCC
Confidence 4688999999874 33333333344 789999999987543322 2332 2221 222221 157899998877
Q ss_pred ccccccHHHHHHHHHhccccCeeEEE
Q 022836 140 FEHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 140 l~~~~~~~~~l~~~~~~LkpgG~l~~ 165 (291)
.+-+. . ...+.+|||++++-
T Consensus 225 ~~~i~-~-----~~~~~mk~g~~lin 244 (300)
T 2rir_A 225 SMILN-Q-----TVLSSMTPKTLILD 244 (300)
T ss_dssp SCCBC-H-----HHHTTSCTTCEEEE
T ss_pred hhhhC-H-----HHHHhCCCCCEEEE
Confidence 64332 1 24567899887643
No 465
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=86.60 E-value=4.8 Score=32.10 Aligned_cols=71 Identities=20% Similarity=0.218 Sum_probs=46.0
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCe-EEEEccccCCccC--CCccEEEEc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNV-EIIVADISTFEME--ASYDRIYSI 137 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v-~~~~~d~~~~~~~--~~~D~i~~~ 137 (291)
.+++||=.|+ +|.++..+++.+ .+.+|++++.++...+... .. ++ .++.+|+.+.... +..|+|+.+
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~~---~~~~~~~~Dl~~~~~~~~~~~D~vi~~ 91 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELR----ER---GASDIVVANLEEDFSHAFASIDAVVFA 91 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----HT---TCSEEEECCTTSCCGGGGTTCSEEEEC
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHH----hC---CCceEEEcccHHHHHHHHcCCCEEEEC
Confidence 4789998875 455444444332 3789999999887644322 11 57 8999999722111 678999987
Q ss_pred cccc
Q 022836 138 EMFE 141 (291)
Q Consensus 138 ~~l~ 141 (291)
....
T Consensus 92 ag~~ 95 (236)
T 3e8x_A 92 AGSG 95 (236)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7554
No 466
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=86.54 E-value=8.8 Score=36.41 Aligned_cols=103 Identities=13% Similarity=0.211 Sum_probs=68.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCC--------CCEEEEEcCCHHHHHHHHHHHHHhC---------------------C-
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYS--------NCKITGICNSKTQKEFIEEQCRVLE---------------------L- 112 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~--------~~~v~~vD~s~~~~~~a~~~~~~~~---------------------~- 112 (291)
+...|+-||||.=.....|....+ +..++=||. |+.++.-++.++..+ .
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 467899999999988888876533 567777787 555554444443211 0
Q ss_pred --CCeEEEEccccCCcc-----------C-CCccEEEEccccccc--ccHHHHHHHHHhccccCeeEEEEee
Q 022836 113 --QNVEIIVADISTFEM-----------E-ASYDRIYSIEMFEHM--KNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 113 --~~v~~~~~d~~~~~~-----------~-~~~D~i~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
++..++.+|+.+... + ...-++++-.++.++ +...++++.+.+. |+|.+++...
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~ 255 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQ 255 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEE
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEe
Confidence 267889999987410 2 233467777888888 4567788888754 6776666444
No 467
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.52 E-value=3.7 Score=33.61 Aligned_cols=73 Identities=14% Similarity=0.055 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-----------C
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----------E 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-----------~ 128 (291)
.++++|=.|++.|. ++..|++. +++|+.++.+++..+...+.....+. ++.++.+|+.+... -
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46788988876653 45555554 88999999999888777776666554 78999999988531 0
Q ss_pred CCccEEEEcc
Q 022836 129 ASYDRIYSIE 138 (291)
Q Consensus 129 ~~~D~i~~~~ 138 (291)
++.|+++.+.
T Consensus 87 g~id~lv~nA 96 (264)
T 3ucx_A 87 GRVDVVINNA 96 (264)
T ss_dssp SCCSEEEECC
T ss_pred CCCcEEEECC
Confidence 4789999876
No 468
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=86.50 E-value=4.8 Score=33.19 Aligned_cols=86 Identities=16% Similarity=0.174 Sum_probs=53.1
Q ss_pred CEEEEEcCCc-ch-HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccccc
Q 022836 65 HTVLDVGCGW-GS-LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFEH 142 (291)
Q Consensus 65 ~~vLDiGcG~-G~-~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~l~~ 142 (291)
++|.=||||. |. ++..+.+. +.+|+++|.+++.++.+. ..+.. .. ...|..+. ...|+|+..-.-.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~----~~g~~-~~-~~~~~~~~---~~~D~vi~av~~~- 68 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAV----ERQLV-DE-AGQDLSLL---QTAKIIFLCTPIQ- 68 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHH----HTTSC-SE-EESCGGGG---TTCSEEEECSCHH-
T ss_pred CEEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHH----hCCCC-cc-ccCCHHHh---CCCCEEEEECCHH-
Confidence 3678899884 22 34444443 679999999998665443 33431 11 22344333 4679998865432
Q ss_pred cccHHHHHHHHHhccccCeeEE
Q 022836 143 MKNYQNLLKKISKWMKEDTLLF 164 (291)
Q Consensus 143 ~~~~~~~l~~~~~~LkpgG~l~ 164 (291)
....+++.+...++|+..++
T Consensus 69 --~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 69 --LILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp --HHHHHHHHHGGGSCTTCEEE
T ss_pred --HHHHHHHHHHhhCCCCCEEE
Confidence 34667788888888877553
No 469
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.16 E-value=2 Score=37.32 Aligned_cols=89 Identities=8% Similarity=0.095 Sum_probs=55.0
Q ss_pred CCEEEEEcCCc-c-hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-CCccEEEEcccc
Q 022836 64 GHTVLDVGCGW-G-SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-ASYDRIYSIEMF 140 (291)
Q Consensus 64 ~~~vLDiGcG~-G-~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~~~~l 140 (291)
.++|.=||+|. | .++..|++. +.+|+++|.+++.++.+. ..+. .. ..+..+.... ...|+|+..-.-
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~----~~g~---~~-~~s~~e~~~~a~~~DvVi~~vp~ 91 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNVNAVQALE----REGI---AG-ARSIEEFCAKLVKPRVVWLMVPA 91 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHH----TTTC---BC-CSSHHHHHHHSCSSCEEEECSCG
T ss_pred CCEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHH----HCCC---EE-eCCHHHHHhcCCCCCEEEEeCCH
Confidence 57999999884 2 244555544 789999999998655443 2333 11 1222222111 345999876544
Q ss_pred cccccHHHHHHHHHhccccCeeEEE
Q 022836 141 EHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~LkpgG~l~~ 165 (291)
. ....+++.+...|++|.+++-
T Consensus 92 ~---~v~~vl~~l~~~l~~g~iiId 113 (358)
T 4e21_A 92 A---VVDSMLQRMTPLLAANDIVID 113 (358)
T ss_dssp G---GHHHHHHHHGGGCCTTCEEEE
T ss_pred H---HHHHHHHHHHhhCCCCCEEEe
Confidence 3 456778888888888766543
No 470
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=86.13 E-value=13 Score=33.50 Aligned_cols=96 Identities=14% Similarity=0.195 Sum_probs=57.7
Q ss_pred CCEEEEEcCCc--chHHHHHHHHCCCCEEEEEcCCHHHHH-HH---HHHHHHhCC----------CCeEEEEccccCCcc
Q 022836 64 GHTVLDVGCGW--GSLSLYIAQKYSNCKITGICNSKTQKE-FI---EEQCRVLEL----------QNVEIIVADISTFEM 127 (291)
Q Consensus 64 ~~~vLDiGcG~--G~~~~~la~~~~~~~v~~vD~s~~~~~-~a---~~~~~~~~~----------~~v~~~~~d~~~~~~ 127 (291)
-.+|-=||+|. +.++..+++. +.+|+++|.+++... .. .+...+.|. .++.+ ..|+..+
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~-t~dl~al-- 128 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA--GIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI-TSDFHKL-- 128 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE-ESCGGGC--
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE-eCCHHHH--
Confidence 36899999996 3455556654 889999999998211 11 111112221 23444 2344321
Q ss_pred CCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 128 EASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 128 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
...|+|+..-+ +...-...+++++...++|+.++...
T Consensus 129 -~~aDlVIeAVp-e~~~vk~~v~~~l~~~~~~~aIlasn 165 (460)
T 3k6j_A 129 -SNCDLIVESVI-EDMKLKKELFANLENICKSTCIFGTN 165 (460)
T ss_dssp -TTCSEEEECCC-SCHHHHHHHHHHHHTTSCTTCEEEEC
T ss_pred -ccCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCCEEEec
Confidence 56899887532 22223467889999999998877543
No 471
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=86.12 E-value=2.3 Score=34.67 Aligned_cols=75 Identities=9% Similarity=-0.083 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC----------C
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----------A 129 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~----------~ 129 (291)
.++++|=.|++.|. ++..|++. |++|++++.++...+.+.+.....+. ++.++.+|+.+...- +
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 46788888877553 44445544 88999999999887777777666554 789999999885311 3
Q ss_pred CccEEEEcccc
Q 022836 130 SYDRIYSIEMF 140 (291)
Q Consensus 130 ~~D~i~~~~~l 140 (291)
..|+++.+...
T Consensus 83 ~id~lv~nAg~ 93 (252)
T 3h7a_A 83 PLEVTIFNVGA 93 (252)
T ss_dssp CEEEEEECCCC
T ss_pred CceEEEECCCc
Confidence 68999987654
No 472
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=86.04 E-value=4.7 Score=32.68 Aligned_cols=76 Identities=12% Similarity=0.171 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcC-CHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-----C------
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICN-SKTQKEFIEEQCRVLELQNVEIIVADISTFEM-----E------ 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~-s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~------ 128 (291)
.+++||=.|++ |.++..+++.+ .+.+|++++. ++...+...+.....+. ++.++.+|+.+... .
T Consensus 6 ~~k~vlITGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 6 EGKVVVITGSS-TGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35678777654 55555544432 2789999998 77665555554444443 68889999987431 0
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
+..|+++.+...
T Consensus 84 g~id~li~~Ag~ 95 (261)
T 1gee_A 84 GKLDVMINNAGL 95 (261)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999987643
No 473
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=85.92 E-value=5.1 Score=33.87 Aligned_cols=98 Identities=19% Similarity=0.165 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCcch--HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEccc-
Q 022836 63 DGHTVLDVGCGWGS--LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEM- 139 (291)
Q Consensus 63 ~~~~vLDiGcG~G~--~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~- 139 (291)
+..+|.=+|+|..+ .+..++......+++.+|++++....+..... ...+++... .|..++ ...|+|+...-
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~-~~~~~i~~t-~d~~~l---~~aD~Vi~aag~ 87 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEI-FNLPNVEIS-KDLSAS---AHSKVVIFTVNS 87 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHH-HTCTTEEEE-SCGGGG---TTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhh-hcCCCeEEe-CCHHHH---CCCCEEEEcCCC
Confidence 34689999999533 55566655323489999999864334444433 222355553 554332 56799998641
Q ss_pred -----------ccccccHHHHHHHHHhccccCeeEEEE
Q 022836 140 -----------FEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 140 -----------l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
...++-...+++.+.+.. |++++++.
T Consensus 88 ~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 124 (303)
T 2i6t_A 88 LGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVA 124 (303)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEc
Confidence 222223456677777764 99998773
No 474
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=85.64 E-value=3.5 Score=33.35 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++.|. ++..|++. +++|+.++.+++..+...+.....+. ++.++.+|+.+... .
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALARE--GAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46788888876542 44444444 88999999999888777766665543 68899999988531 0
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
+..|+++.+...
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 378999987644
No 475
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=85.63 E-value=1.7 Score=37.36 Aligned_cols=91 Identities=11% Similarity=0.125 Sum_probs=55.6
Q ss_pred CCC-CEEEEE-cCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc-------CCCc
Q 022836 62 EDG-HTVLDV-GCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM-------EASY 131 (291)
Q Consensus 62 ~~~-~~vLDi-GcG-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-------~~~~ 131 (291)
.++ .+||=. |+| .|..+..+++.. +++|++++.+++..+.+++ .|.+ ..+..+-.++.. ...+
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----~Ga~--~~~~~~~~~~~~~v~~~~~~~g~ 234 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKD----IGAA--HVLNEKAPDFEATLREVMKAEQP 234 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHH----HTCS--EEEETTSTTHHHHHHHHHHHHCC
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCC--EEEECCcHHHHHHHHHHhcCCCC
Confidence 344 566644 443 566777777665 7899999999987776653 4542 122221112110 1368
Q ss_pred cEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 132 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 132 D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
|+|+-+..- ..+..+.++|+++|.+++.
T Consensus 235 D~vid~~g~-------~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 235 RIFLDAVTG-------PLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp CEEEESSCH-------HHHHHHHHHSCTTCEEEEC
T ss_pred cEEEECCCC-------hhHHHHHhhhcCCCEEEEE
Confidence 998865332 2246678899999998774
No 476
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=85.56 E-value=5 Score=32.69 Aligned_cols=72 Identities=8% Similarity=0.105 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-----------
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~----------- 128 (291)
.++++|=.|++.|. ++..|+++ +++|+.+|.+++..+...+. .+ .++.++.+|+.+...-
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVRE--GATVAIADIDIERARQAAAE---IG-PAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHH---HC-TTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---hC-CCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 46788888866442 34444544 88999999988765544332 23 2688999999874310
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
+..|+++.+...
T Consensus 81 g~id~lv~~Ag~ 92 (259)
T 4e6p_A 81 GGLDILVNNAAL 92 (259)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 378999987654
No 477
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=85.53 E-value=1.9 Score=35.65 Aligned_cols=77 Identities=18% Similarity=0.137 Sum_probs=47.6
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCC--CCeEEEEccccCCccC----------
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLEL--QNVEIIVADISTFEME---------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~v~~~~~d~~~~~~~---------- 128 (291)
.++++|=.|++ |.++..+++.+ .+++|++++.+++..+...+....... .++.++.+|+.+...-
T Consensus 5 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 5 AEKVAIITGSS-NGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 35677777765 44444443321 288999999998776655444421111 2688899999874310
Q ss_pred -CCccEEEEcccc
Q 022836 129 -ASYDRIYSIEMF 140 (291)
Q Consensus 129 -~~~D~i~~~~~l 140 (291)
+..|+++.+...
T Consensus 84 ~g~id~lv~~Ag~ 96 (278)
T 1spx_A 84 FGKLDILVNNAGA 96 (278)
T ss_dssp HSCCCEEEECCC-
T ss_pred cCCCCEEEECCCC
Confidence 378999987643
No 478
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=85.42 E-value=4 Score=33.29 Aligned_cols=75 Identities=7% Similarity=-0.019 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---------C--
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---------E-- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---------~-- 128 (291)
.++++|=.|++.|. ++..|++. +++|+.+|.+++..+...+.....+. ++.++.+|+.+... .
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKA--GASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788888776553 45555555 88999999999887777766666554 78999999988531 0
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
++.|+++.+...
T Consensus 88 g~id~lv~nAg~ 99 (256)
T 3gaf_A 88 GKITVLVNNAGG 99 (256)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999987644
No 479
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=85.42 E-value=13 Score=33.16 Aligned_cols=99 Identities=9% Similarity=0.021 Sum_probs=56.6
Q ss_pred HHHHHHHHcC-CCCCCEEEEEcCCc-chHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC
Q 022836 51 MLELYCERSR-LEDGHTVLDVGCGW-GSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME 128 (291)
Q Consensus 51 ~~~~~~~~~~-~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 128 (291)
.++.+.+..+ ...+.+|+=+|+|. |......++.+ |++|+++|.++.....+ ...|. . ..++.+..
T Consensus 206 ~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~-Ga~Viv~D~dp~ra~~A----~~~G~---~--v~~Leeal-- 273 (435)
T 3gvp_A 206 ILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAM-GSIVYVTEIDPICALQA----CMDGF---R--LVKLNEVI-- 273 (435)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHH----HHTTC---E--ECCHHHHT--
T ss_pred HHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCChhhhHHH----HHcCC---E--eccHHHHH--
Confidence 3344444333 34789999999985 44444444445 88999999998643222 22332 2 23333321
Q ss_pred CCccEEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 129 ASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 129 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
...|+|+...--.++-+ ....+.+|||++++-.
T Consensus 274 ~~ADIVi~atgt~~lI~-----~e~l~~MK~gailINv 306 (435)
T 3gvp_A 274 RQVDIVITCTGNKNVVT-----REHLDRMKNSCIVCNM 306 (435)
T ss_dssp TTCSEEEECSSCSCSBC-----HHHHHHSCTTEEEEEC
T ss_pred hcCCEEEECCCCcccCC-----HHHHHhcCCCcEEEEe
Confidence 56799988522222211 2455678999876553
No 480
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=85.27 E-value=7.1 Score=31.95 Aligned_cols=72 Identities=18% Similarity=0.187 Sum_probs=46.5
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++.|. ++..|++. +++|++++.+++..+...+ ..+ .++.++.+|+.+... .
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~---~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFARE--GASLVAVDREERLLAEAVA---ALE-AEAIAVVADVSDPKAVEAVFAEALEEF 78 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH---TCC-SSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---Hhc-CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35688878765442 34444444 8899999998875543322 222 368889999987431 0
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
++.|+++.+...
T Consensus 79 g~iD~lvnnAg~ 90 (263)
T 2a4k_A 79 GRLHGVAHFAGV 90 (263)
T ss_dssp SCCCEEEEGGGG
T ss_pred CCCcEEEECCCC
Confidence 467999987654
No 481
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=85.13 E-value=1.4 Score=38.31 Aligned_cols=66 Identities=17% Similarity=0.151 Sum_probs=41.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc---C-CCccEEEEc
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY-SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM---E-ASYDRIYSI 137 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---~-~~~D~i~~~ 137 (291)
..++||=|||| ..+..+++.. ...+|+.+|.+.+.++.+++ .+..+..|+.+... . ...|+|++.
T Consensus 15 ~~mkilvlGaG--~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~--------~~~~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 15 RHMKVLILGAG--NIGRAIAWDLKDEFDVYIGDVNNENLEKVKE--------FATPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp -CCEEEEECCS--HHHHHHHHHHTTTSEEEEEESCHHHHHHHTT--------TSEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CccEEEEECCC--HHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc--------cCCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence 46799999995 3333333321 25689999999876554422 45566778766431 1 678999985
Q ss_pred c
Q 022836 138 E 138 (291)
Q Consensus 138 ~ 138 (291)
.
T Consensus 85 ~ 85 (365)
T 3abi_A 85 L 85 (365)
T ss_dssp C
T ss_pred c
Confidence 4
No 482
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=85.00 E-value=5 Score=33.29 Aligned_cols=75 Identities=16% Similarity=0.101 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHH-------HHHHHHHHHHHhCCCCeEEEEccccCCcc-----
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKT-------QKEFIEEQCRVLELQNVEIIVADISTFEM----- 127 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~-------~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----- 127 (291)
.++++|=.|++.|. ++..|+++ +++|++++.+.. .++...+.....+. ++.++.+|+.+...
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAAD--GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHH
Confidence 46788888876552 34444444 789999998765 34444444444444 78899999988531
Q ss_pred ----C--CCccEEEEcccc
Q 022836 128 ----E--ASYDRIYSIEMF 140 (291)
Q Consensus 128 ----~--~~~D~i~~~~~l 140 (291)
. ++.|+++.+...
T Consensus 85 ~~~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 0 478999987644
No 483
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=84.86 E-value=3.2 Score=35.50 Aligned_cols=101 Identities=13% Similarity=0.102 Sum_probs=63.9
Q ss_pred CCCEEEEEcCCcch--HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHh-------CC-----------CCeEEEEccc
Q 022836 63 DGHTVLDVGCGWGS--LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVL-------EL-----------QNVEIIVADI 122 (291)
Q Consensus 63 ~~~~vLDiGcG~G~--~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~-----------~~v~~~~~d~ 122 (291)
...+|-=||+|+=+ .+..++.. |.+|+.+|++++.++.+.+++++. +. .++.+ ..|+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~--G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~l 81 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNL 81 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccch
Confidence 34689999999644 34444444 899999999999988877665432 11 01222 1222
Q ss_pred cCCccCCCccEEEEcccccccccHHHHHHHHHhccccCeeEEEEeec
Q 022836 123 STFEMEASYDRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 123 ~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
.+. -...|+|+= .+.+.+.-..++++++-++++|+.+|.-.+.+
T Consensus 82 ~~a--~~~ad~ViE-av~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs 125 (319)
T 3ado_A 82 AEA--VEGVVHIQE-CVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp HHH--TTTEEEEEE-CCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred HhH--hccCcEEee-ccccHHHHHHHHHHHHHHHhhhcceeehhhhh
Confidence 221 145676653 35555555688999999999999887665544
No 484
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=84.85 E-value=0.46 Score=40.74 Aligned_cols=55 Identities=11% Similarity=-0.004 Sum_probs=40.4
Q ss_pred eEEE-EccccCCc---cCCCccEEEEccccccc-----------ccHHHHHHHHHhccccCeeEEEEeec
Q 022836 115 VEII-VADISTFE---MEASYDRIYSIEMFEHM-----------KNYQNLLKKISKWMKEDTLLFVHHFC 169 (291)
Q Consensus 115 v~~~-~~d~~~~~---~~~~~D~i~~~~~l~~~-----------~~~~~~l~~~~~~LkpgG~l~~~~~~ 169 (291)
..++ ++|..+.. ..+++|+|++..++... ......+..+.++|+|||.+++....
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGL 108 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCc
Confidence 5667 88887632 22689999999987532 23456788889999999999887543
No 485
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=84.80 E-value=10 Score=31.01 Aligned_cols=76 Identities=9% Similarity=0.034 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEE-cCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-----------
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGI-CNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~--~~~~v~~v-D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~----------- 128 (291)
.+++||=.|++ |.++..+++.+ .+++|+.+ +.+++..+...+.....+. ++.++.+|+.+...-
T Consensus 25 ~~k~vlITGas-~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 25 DTPVVLVTGGS-RGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGG-EAVAIPGDVGNAADIAAMFSAVDRQF 102 (272)
T ss_dssp CSCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 45677777765 44444444332 27888776 6777776666666555543 788999999875310
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
+..|+++.+...
T Consensus 103 g~id~li~nAg~ 114 (272)
T 4e3z_A 103 GRLDGLVNNAGI 114 (272)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999987643
No 486
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=84.53 E-value=5.9 Score=33.58 Aligned_cols=93 Identities=17% Similarity=0.133 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCc-c-hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCC----CCeEEE-----EccccCCccCCCc
Q 022836 63 DGHTVLDVGCGW-G-SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLEL----QNVEII-----VADISTFEMEASY 131 (291)
Q Consensus 63 ~~~~vLDiGcG~-G-~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~v~~~-----~~d~~~~~~~~~~ 131 (291)
..++|.=||+|. | .++..|++. +.+|+.+ .+++.++..++ .|+ +...+. ..|... ...+
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~-~~~~~~~~i~~----~g~~~~~~~~~~~~~~~~~~~~~~---~~~~ 87 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA--GHEVILI-ARPQHVQAIEA----TGLRLETQSFDEQVKVSASSDPSA---VQGA 87 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT--TCEEEEE-CCHHHHHHHHH----HCEEEECSSCEEEECCEEESCGGG---GTTC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC--CCeEEEE-EcHhHHHHHHh----CCeEEEcCCCcEEEeeeeeCCHHH---cCCC
Confidence 357999999984 3 345555544 7799999 88876655543 332 011110 112111 1578
Q ss_pred cEEEEcccccccccHHHHHHHHHhccccCeeEEEEee
Q 022836 132 DRIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVHHF 168 (291)
Q Consensus 132 D~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 168 (291)
|+|+..-.-. +...+++.+...++|+..++...-
T Consensus 88 D~vilavk~~---~~~~~l~~l~~~l~~~~~iv~~~n 121 (318)
T 3hwr_A 88 DLVLFCVKST---DTQSAALAMKPALAKSALVLSLQN 121 (318)
T ss_dssp SEEEECCCGG---GHHHHHHHHTTTSCTTCEEEEECS
T ss_pred CEEEEEcccc---cHHHHHHHHHHhcCCCCEEEEeCC
Confidence 9988865443 457888999999999877655433
No 487
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=84.46 E-value=5.6 Score=35.67 Aligned_cols=98 Identities=14% Similarity=0.141 Sum_probs=57.4
Q ss_pred CEEEEEcCCc-ch-HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH------------HHh-CCCCeEEEEccccCCccCC
Q 022836 65 HTVLDVGCGW-GS-LSLYIAQKYSNCKITGICNSKTQKEFIEEQC------------RVL-ELQNVEIIVADISTFEMEA 129 (291)
Q Consensus 65 ~~vLDiGcG~-G~-~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~------------~~~-~~~~v~~~~~d~~~~~~~~ 129 (291)
++|.=||+|. |. ++..|++. +.+|+++|.+++.++..++.. ... ...++.+. .|..+.. .
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~ea~--~ 77 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQAV--P 77 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHHHG--G
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHHHH--h
Confidence 5788899984 32 34445544 789999999999877655410 000 00123332 3333211 4
Q ss_pred CccEEEEcccccc-------cccHHHHHHHHHhccccCeeEEEEe
Q 022836 130 SYDRIYSIEMFEH-------MKNYQNLLKKISKWMKEDTLLFVHH 167 (291)
Q Consensus 130 ~~D~i~~~~~l~~-------~~~~~~~l~~~~~~LkpgG~l~~~~ 167 (291)
..|+|+..-.-.. +.....+++.+.+.|++|..++..+
T Consensus 78 ~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 78 EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 5788887543321 1245677888889998887665543
No 488
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=84.41 E-value=6.8 Score=33.49 Aligned_cols=92 Identities=16% Similarity=0.233 Sum_probs=54.2
Q ss_pred CEEEEEcCCc-ch-HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCC----CeE------EEEccccCCccCCCcc
Q 022836 65 HTVLDVGCGW-GS-LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQ----NVE------IIVADISTFEMEASYD 132 (291)
Q Consensus 65 ~~vLDiGcG~-G~-~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~----~v~------~~~~d~~~~~~~~~~D 132 (291)
++|.=||+|. |. ++..|++. +.+|+++|.+++.++..++. .++. ... ....|..+. ...+|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~D 77 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDR---GAIIAEGPGLAGTAHPDLLTSDIGLA--VKDAD 77 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHH---TSEEEESSSCCEEECCSEEESCHHHH--HTTCS
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhc---CCeEEeccccccccccceecCCHHHH--HhcCC
Confidence 6899999985 32 34444443 77999999998876554432 1210 000 011121111 14689
Q ss_pred EEEEcccccccccHHHHHHHHHhccccCeeEEEE
Q 022836 133 RIYSIEMFEHMKNYQNLLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 133 ~i~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 166 (291)
+|+..-.-. ....+++.+...+++|..++..
T Consensus 78 ~vi~~v~~~---~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 78 VILIVVPAI---HHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EEEECSCGG---GHHHHHHHHGGGCCTTCEEEES
T ss_pred EEEEeCCch---HHHHHHHHHHHhCCCCCEEEEc
Confidence 988765443 2367788888889987765543
No 489
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=84.11 E-value=4.2 Score=32.73 Aligned_cols=75 Identities=20% Similarity=0.256 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++.|. ++..|+++ +++|++++.++...+...+..+..+. ++.++.+|+.+... .
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASK--GATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 35678877765442 34444444 88999999999888777776666654 78999999987531 1
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
++.|+++.+...
T Consensus 81 ~~id~li~~Ag~ 92 (247)
T 3lyl_A 81 LAIDILVNNAGI 92 (247)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999987644
No 490
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=83.99 E-value=4.1 Score=33.70 Aligned_cols=75 Identities=11% Similarity=0.096 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++.|. ++..|++. |++|++++.+++..+...+.....+. ++.++.+|+.+... .
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAAR--GIAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788888876552 34445544 88999999999887777666655554 78999999987531 0
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
++.|+++.+...
T Consensus 100 g~id~lv~nAg~ 111 (279)
T 3sju_A 100 GPIGILVNSAGR 111 (279)
T ss_dssp CSCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 478999987644
No 491
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=83.93 E-value=11 Score=31.16 Aligned_cols=89 Identities=24% Similarity=0.280 Sum_probs=54.0
Q ss_pred CEEEEEcCCcc--hHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccccc
Q 022836 65 HTVLDVGCGWG--SLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMFEH 142 (291)
Q Consensus 65 ~~vLDiGcG~G--~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~l~~ 142 (291)
++|.=||+|.= .++..+++..++.+|+++|.+++..+.+. ..|.. .....|..+.. ...|+|+..-.-.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~----~~g~~--~~~~~~~~~~~--~~aDvVilavp~~- 77 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIAL----ERGIV--DEATADFKVFA--ALADVIILAVPIK- 77 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHH----HTTSC--SEEESCTTTTG--GGCSEEEECSCHH-
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHH----HcCCc--ccccCCHHHhh--cCCCEEEEcCCHH-
Confidence 58999999852 34555555533579999999988665443 23431 11223333321 4679988865443
Q ss_pred cccHHHHHHHHHhc-cccCeeEE
Q 022836 143 MKNYQNLLKKISKW-MKEDTLLF 164 (291)
Q Consensus 143 ~~~~~~~l~~~~~~-LkpgG~l~ 164 (291)
....+++.+... ++++..++
T Consensus 78 --~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 78 --KTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp --HHHHHHHHHHTSCCCTTCEEE
T ss_pred --HHHHHHHHHHhcCCCCCCEEE
Confidence 235677777777 88776544
No 492
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=83.88 E-value=2 Score=38.04 Aligned_cols=45 Identities=9% Similarity=-0.221 Sum_probs=34.7
Q ss_pred CCEEEEEcCCcchHHHHHHHHCC-CCE----EEEEcCCHHHHHHHHHHHH
Q 022836 64 GHTVLDVGCGWGSLSLYIAQKYS-NCK----ITGICNSKTQKEFIEEQCR 108 (291)
Q Consensus 64 ~~~vLDiGcG~G~~~~~la~~~~-~~~----v~~vD~s~~~~~~a~~~~~ 108 (291)
..+|+|+.||.|+.+..+.+..- ..- |.++|+++..++..+.+..
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 46999999999999998876520 012 7889999998877776664
No 493
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=83.85 E-value=2.7 Score=36.34 Aligned_cols=94 Identities=13% Similarity=0.086 Sum_probs=58.2
Q ss_pred cCCCCCCEEEEEcCC-cchHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEcccc------CCccCCCc
Q 022836 59 SRLEDGHTVLDVGCG-WGSLSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADIS------TFEMEASY 131 (291)
Q Consensus 59 ~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~------~~~~~~~~ 131 (291)
...+++.+||=+|+| .|..+..+++..++++|+++|.+++..+.++ +.|.+. ++...-. +......+
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~--vi~~~~~~~~~v~~~~~g~g~ 255 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGADH--VVDARRDPVKQVMELTRGRGV 255 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTCSE--EEETTSCHHHHHHHHTTTCCE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH----HhCCCE--EEeccchHHHHHHHHhCCCCC
Confidence 677899999999986 4566777776543679999999998766654 345421 2211100 11111368
Q ss_pred cEEEEcccccccccHHH--HHHHHHhccccCeeEEEE
Q 022836 132 DRIYSIEMFEHMKNYQN--LLKKISKWMKEDTLLFVH 166 (291)
Q Consensus 132 D~i~~~~~l~~~~~~~~--~l~~~~~~LkpgG~l~~~ 166 (291)
|+|+-.-.- .. .++...+. ++|+++..
T Consensus 256 Dvvid~~G~------~~~~~~~~~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 256 NVAMDFVGS------QATVDYTPYLLG--RMGRLIIV 284 (359)
T ss_dssp EEEEESSCC------HHHHHHGGGGEE--EEEEEEEC
T ss_pred cEEEECCCC------chHHHHHHHhhc--CCCEEEEE
Confidence 998864321 22 45555565 99988764
No 494
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=83.84 E-value=2.7 Score=42.91 Aligned_cols=74 Identities=14% Similarity=0.078 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCcchHHHHHHHHCCCC--EEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCC---------------
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKYSNC--KITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTF--------------- 125 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--------------- 125 (291)
+..+++||-||.|+++.-+.+. |. .+.++|+++.+++..+.|. +...++.+|+.++
T Consensus 850 ~~l~viDLFsG~GGlslGfe~A--G~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~gdi~~~~~~ 922 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQA--GISETLWAIEMWDPAAQAFRLNN-----PGTTVFTEDCNVLLKLVMAGEVTNSLGQ 922 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHT--TSEEEEEEECCSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHTTTCSBCSSCC
T ss_pred CCceEEecccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC-----CCCcEeeccHHHHhHhhhccchhhhhhh
Confidence 4679999999999999998765 64 5789999999776655543 2345555554321
Q ss_pred --ccCCCccEEEEccccccc
Q 022836 126 --EMEASYDRIYSIEMFEHM 143 (291)
Q Consensus 126 --~~~~~~D~i~~~~~l~~~ 143 (291)
+..+.+|+|+...+-..+
T Consensus 923 ~lp~~~~vDvl~GGpPCQ~F 942 (1330)
T 3av4_A 923 RLPQKGDVEMLCGGPPCQGF 942 (1330)
T ss_dssp BCCCTTTCSEEEECCCCTTT
T ss_pred hccccCccceEEecCCCccc
Confidence 112468999987755444
No 495
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.79 E-value=3.8 Score=33.55 Aligned_cols=76 Identities=14% Similarity=0.097 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-----------
Q 022836 63 DGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME----------- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~----------- 128 (291)
.++++|=.|++.|. ++..|++. +++|+.++.+++..+.+.+.....+..++.++.+|+.+...-
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARA--GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 46678877765442 34444444 889999999998877776666655534789999999885310
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
++.|+++.+...
T Consensus 87 g~id~lvnnAg~ 98 (262)
T 3pk0_A 87 GGIDVVCANAGV 98 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999987643
No 496
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=83.79 E-value=3.8 Score=33.49 Aligned_cols=77 Identities=13% Similarity=0.117 Sum_probs=53.6
Q ss_pred CCCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022836 62 EDGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~- 128 (291)
..+++||=.|++. .++..+++.+ .+++|++++.+++..+...+.....+. ++.++.+|+.+... .
T Consensus 27 l~~k~vlITGas~-gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 27 LSGQVAVVTGASR-GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTTCEEEESSTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 3567888777654 4444444331 288999999999887777766666554 68899999987531 0
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
++.|+++.+...
T Consensus 105 g~id~lv~~Ag~ 116 (262)
T 3rkr_A 105 GRCDVLVNNAGV 116 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999987654
No 497
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=83.76 E-value=5.8 Score=31.93 Aligned_cols=73 Identities=15% Similarity=0.161 Sum_probs=48.4
Q ss_pred CCCCEEEEEcCCcch---HHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc------C-CCc
Q 022836 62 EDGHTVLDVGCGWGS---LSLYIAQKYSNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM------E-ASY 131 (291)
Q Consensus 62 ~~~~~vLDiGcG~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~------~-~~~ 131 (291)
.++++||=.|++.|. ++..|+++ +.+|+.++.++..++...+.. . .++.+..+|+.+... . +..
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~i 85 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKL--GSKVIISGSNEEKLKSLGNAL---K-DNYTIEVCNLANKEECSNLISKTSNL 85 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH---C-SSEEEEECCTTSHHHHHHHHHTCSCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHh---c-cCccEEEcCCCCHHHHHHHHHhcCCC
Confidence 467788877775442 33444444 889999999988765544332 2 368888999887431 1 478
Q ss_pred cEEEEcccc
Q 022836 132 DRIYSIEMF 140 (291)
Q Consensus 132 D~i~~~~~l 140 (291)
|+++.+...
T Consensus 86 d~li~~Ag~ 94 (249)
T 3f9i_A 86 DILVCNAGI 94 (249)
T ss_dssp SEEEECCC-
T ss_pred CEEEECCCC
Confidence 999987654
No 498
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=83.68 E-value=8.6 Score=31.32 Aligned_cols=76 Identities=18% Similarity=0.174 Sum_probs=44.3
Q ss_pred CCCEEEEEcCCc-chHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCcc----------C-
Q 022836 63 DGHTVLDVGCGW-GSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEM----------E- 128 (291)
Q Consensus 63 ~~~~vLDiGcG~-G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------~- 128 (291)
.++++|=.|++. |.++..+++.+ .+++|++++.++...+.+.+.....+ +..++.+|+.+... .
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELGKVW 85 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHHHHHc
Confidence 356888888752 44444444332 27899999987632222222222222 34678899887421 1
Q ss_pred CCccEEEEcccc
Q 022836 129 ASYDRIYSIEMF 140 (291)
Q Consensus 129 ~~~D~i~~~~~l 140 (291)
++.|+++.+...
T Consensus 86 g~iD~lv~~Ag~ 97 (265)
T 1qsg_A 86 PKFDGFVHSIGF 97 (265)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999987654
No 499
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=83.65 E-value=3 Score=33.68 Aligned_cols=76 Identities=12% Similarity=0.054 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCcchHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccC-----------C
Q 022836 63 DGHTVLDVGCGWGSLSLYIAQKY--SNCKITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEME-----------A 129 (291)
Q Consensus 63 ~~~~vLDiGcG~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 129 (291)
.+++||=.|+ +|.++..+++.+ .+.+|++++.++...+...+.....+. ++.++.+|+.+...- +
T Consensus 10 ~~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 10 DGKCAIITGA-GAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 3567876664 566555555432 378999999998876655555544443 688899999874310 3
Q ss_pred CccEEEEcccc
Q 022836 130 SYDRIYSIEMF 140 (291)
Q Consensus 130 ~~D~i~~~~~l 140 (291)
..|+|+.+...
T Consensus 88 ~~d~vi~~Ag~ 98 (255)
T 1fmc_A 88 KVDILVNNAGG 98 (255)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999987643
No 500
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=83.60 E-value=6.3 Score=32.20 Aligned_cols=88 Identities=14% Similarity=0.198 Sum_probs=54.0
Q ss_pred CCEEEEEcCCc-ch-HHHHHHHHCCCCE-EEEEcCCHHHHHHHHHHHHHhCCCCeEEEEccccCCccCCCccEEEEcccc
Q 022836 64 GHTVLDVGCGW-GS-LSLYIAQKYSNCK-ITGICNSKTQKEFIEEQCRVLELQNVEIIVADISTFEMEASYDRIYSIEMF 140 (291)
Q Consensus 64 ~~~vLDiGcG~-G~-~~~~la~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~l 140 (291)
+++|.=||||. |. ++..+++. +.+ |+++|.+++..+.+.+ ..+. .. ..|..+.. ...|+|+..-.-
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~---~~g~---~~-~~~~~~~~--~~~Dvvi~av~~ 78 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQ---KVEA---EY-TTDLAEVN--PYAKLYIVSLKD 78 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHH---HTTC---EE-ESCGGGSC--SCCSEEEECCCH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHH---HcCC---ce-eCCHHHHh--cCCCEEEEecCH
Confidence 46899999984 32 44455544 566 8999999886554433 2232 22 23443322 467999886544
Q ss_pred cccccHHHHHHHHHhccccCeeEEE
Q 022836 141 EHMKNYQNLLKKISKWMKEDTLLFV 165 (291)
Q Consensus 141 ~~~~~~~~~l~~~~~~LkpgG~l~~ 165 (291)
. ....+++.+...+++|..++-
T Consensus 79 ~---~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 79 S---AFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp H---HHHHHHHHHHTTCCTTCEEEE
T ss_pred H---HHHHHHHHHHhhcCCCcEEEE
Confidence 3 236677788888878765544
Done!