BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022837
(291 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356535513|ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/254 (65%), Positives = 199/254 (78%), Gaps = 4/254 (1%)
Query: 1 METNESSYVPSPDVHGKRSTAPV-KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIND 59
ME+ ESSYV SP+ K + +P KS S D EKPTYIRFLVSN AG+VIGKGGSTI D
Sbjct: 1 MESTESSYVSSPEGPRKHAASPPPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITD 60
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG 119
FQSQSGARIQLSR+HEFFPGTTDRIIM+SG I+EI RAV+L++ KLL+ELH+ED +D
Sbjct: 61 FQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDD-NDAE 119
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
KTK+RL+VPN SCG IIGK GATI+SF++DSQA IKIS D++YYG NDRLVTLTG+ D
Sbjct: 120 PKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFD 179
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY 239
EQMRA+ELI+ KLSED Y+Q+M P++Y GV+FSG+ G+PY V P V A P A +Y
Sbjct: 180 EQMRAIELIVSKLSEDPHYAQSMNSPFSYPGVYFSGYQGVPYTYVLPSV-APPAYNAVNY 238
Query: 240 GPN-MGGRKFQNNK 252
PN G K QN+K
Sbjct: 239 RPNGAAGGKLQNSK 252
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 4 NESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQ 63
N +Y P+ GK L + E+ + V++ G V+G+GG I +
Sbjct: 234 NAVNYRPNGAAGGK--------LQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQA 285
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
SGARI++S ++ GTTDR + I+G+ I A +++ K+
Sbjct: 286 SGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMILQKV 327
>gi|356576359|ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 162/254 (63%), Positives = 195/254 (76%), Gaps = 4/254 (1%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSS-DPTEKPTYIRFLVSNPLAGAVIGKGGSTIND 59
ME+ ESSYV SP+ K + +P S D EKPTYIRFLVSN AG+VIGKGGSTI D
Sbjct: 1 MESTESSYVSSPEGPRKHAASPPPKPPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITD 60
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG 119
FQSQSGARIQLSR+HEFFPGTTDRIIM+SG I+EI RAV+L++ KLL+ELH+ED +D
Sbjct: 61 FQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDD-NDAE 119
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
KTK+RL+VPN SCG IIGK G TI+SF++DSQA IKIS D++YYG NDRLV LTGT D
Sbjct: 120 PKTKVRLVVPNGSCGGIIGKGGVTIRSFIEDSQAGIKISPQDNNYYGQNDRLVMLTGTFD 179
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY 239
EQMRA+ELI+ KL+ED Y+Q+M P++Y GV+FSG+ G+PY V P V A P A +Y
Sbjct: 180 EQMRAIELIVSKLAEDPHYAQSMNSPFSYPGVYFSGYQGVPYTYVLPSV-APPAYNAVNY 238
Query: 240 GPN-MGGRKFQNNK 252
PN G K QN+K
Sbjct: 239 RPNGTAGGKLQNSK 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 4 NESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQ 63
N +Y P+ GK L + E+ + V++ G V+G+GG I +
Sbjct: 234 NAVNYRPNGTAGGK--------LQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQV 285
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
SGARI++S ++ GTTDR + I+G+ I A +++ K+
Sbjct: 286 SGARIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQKV 327
>gi|297810533|ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
gi|297318987|gb|EFH49409.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 310 bits (793), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 151/252 (59%), Positives = 196/252 (77%), Gaps = 2/252 (0%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ES SP+ KRS P S +D EKPT+IRFLVSN AG+VIGKGGSTI +F
Sbjct: 1 MESTESYAAASPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q++SGARIQLSR+ EFFPGTTDRIIMISG+I E++ ++L++DKL +ELHAED ++V
Sbjct: 61 QAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVINGLELILDKLHSELHAED-GNEVEP 119
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ ++RL+VPNSSCG IIGK GATIKSF+++S+A IKIS LD+++YGL+DRLVTL+GT +E
Sbjct: 120 RRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEE 179
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
QMRA++LIL KL+ED YSQ + PY+YAG+F+SGFHG PY P V +N+ +Y
Sbjct: 180 QMRAIDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNS-VNYA 238
Query: 241 PNMGGRKFQNNK 252
PN G K+QN+K
Sbjct: 239 PNGSGGKYQNHK 250
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E T + V++ G V+G+GG I + +GARI++S +F GTTDR + I+G
Sbjct: 252 EASTTVTIGVADEHIGLVLGRGGRNIMEITQITGARIKISDRGDFMSGTTDRKVSITGPQ 311
Query: 92 DEILRAVDLVIDKL 105
I +A ++ K+
Sbjct: 312 RAIQQAETMIKQKV 325
>gi|30680512|ref|NP_850764.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 334
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/252 (59%), Positives = 196/252 (77%), Gaps = 2/252 (0%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ES SP+ KRS P S +D EKPT+IRFLVSN AG+VIGKGGSTI +F
Sbjct: 1 MESTESYAAGSPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q++SGARIQLSR+ EFFPGTTDRIIMISG+I E++ ++L++DKL +ELHAED ++V
Sbjct: 61 QAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAED-GNEVEP 119
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ ++RL+VPNSSCG IIGK GATIKSF+++S+A IKIS LD+++YGL+DRLVTL+GT +E
Sbjct: 120 RRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEE 179
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
QMRA++LIL KL+ED YSQ + PY+YAG+F+SGFHG PY P V +N+ +Y
Sbjct: 180 QMRAIDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNS-VNYA 238
Query: 241 PNMGGRKFQNNK 252
PN G K+QN+K
Sbjct: 239 PNGSGGKYQNHK 250
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E T + V++ G V+G+GG I + +GARI++S +F GTTDR + I+G
Sbjct: 252 EASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQ 311
Query: 92 DEILRAVDLVIDKL 105
I +A ++ K+
Sbjct: 312 RAIQQAETMIKQKV 325
>gi|146336943|gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
Length = 334
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/255 (62%), Positives = 196/255 (76%), Gaps = 7/255 (2%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDP---TEKPTYIRFLVSNPLAGAVIGKGGSTI 57
ME+ ESSYV SP+ G R A S EKPTY+RFLVSN AG+VIGKGGSTI
Sbjct: 1 MESPESSYVSSPE--GPRKHASSPPPDSPSQDSVEKPTYVRFLVSNSAAGSVIGKGGSTI 58
Query: 58 NDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADD 117
DFQSQSGARIQLSR++EFFPGTTDRIIM+SG I+E+LRAV+L++ KLL+ELH+ED +D
Sbjct: 59 TDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEVLRAVELILSKLLSELHSEDD-ND 117
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
V KTK+RLIVPN SCG IIGK GATI+SF+++SQA IKIS D+SYYG NDR+VT+TGT
Sbjct: 118 VEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEESQAGIKISPQDNSYYGQNDRIVTVTGT 177
Query: 178 LDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAA 237
LDEQMR ++LI+ KL+ED YS +M+ P+TY+G + SG+ G+PY V P V A P
Sbjct: 178 LDEQMRGIDLIVSKLAEDPHYSHSMSSPFTYSGAYVSGYQGVPYTYVLPSV-APPAYNGV 236
Query: 238 HYGPNMGGRKFQNNK 252
+Y PN G KFQN+K
Sbjct: 237 NYRPNGTGAKFQNSK 251
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V++ G V+G+GG I+D SGA+I++S ++ GTTDR + I+G+ I A +
Sbjct: 262 VADEHIGLVVGRGGRNISDISQTSGAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESM 321
Query: 101 VIDKL 105
++ K+
Sbjct: 322 ILQKV 326
>gi|224113143|ref|XP_002316405.1| predicted protein [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/252 (61%), Positives = 195/252 (77%), Gaps = 2/252 (0%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ESSYV SP+ KRS P S SD EKPTY RFLVSN AG+VIGKGG+TI DF
Sbjct: 1 MESTESSYVSSPEQPQKRSPPPPASPPSDSEEKPTYTRFLVSNAAAGSVIGKGGATITDF 60
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
QSQSGARIQLSR++EFFPGT+DRIIM+SG ID++L+AV+L+I KLL+E+ AED D+
Sbjct: 61 QSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVLKAVELIIAKLLSEIPAED-GDEAEP 119
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ ++RL+VPNS+CGSIIGK G+ IKSF+++S A IKIS LD ++GL DRLVT+TGTL+E
Sbjct: 120 RMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTLEE 179
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
QM A++LIL KL++D YSQTM P++YAGVFFSGF G+ Y V P V +N+ H G
Sbjct: 180 QMHAIDLILSKLTDDPHYSQTMHAPFSYAGVFFSGFDGIQYACVLPYVATAAYNSMNH-G 238
Query: 241 PNMGGRKFQNNK 252
PN KFQ+NK
Sbjct: 239 PNGAAVKFQHNK 250
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V++ G V+G+GG I + SGAR+++S +F GTTDR I I+G+ I A D+
Sbjct: 261 VADEHIGLVVGRGGRNIMEISQTSGARLKISDRGDFMSGTTDRKITITGSQRAIRAAEDM 320
Query: 101 VIDKL 105
++ K+
Sbjct: 321 IMQKV 325
>gi|359486525|ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/252 (59%), Positives = 188/252 (74%), Gaps = 24/252 (9%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ES+YV SP+V KRS+ P +S +SD EK TYIRFLVSN AG+VIGKGGSTINDF
Sbjct: 1 MESPESAYVSSPEVPPKRSSPP-RSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDF 59
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
QSQSGARIQLSR+HEFFPGT+DRIIMISG +EI++A++L++ KLL+E+H ED D+
Sbjct: 60 QSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTED-GDEADP 118
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
++K+RLIVPNSSCG IIGK G+TIKSF++DSQA IKIS D++Y GL DRLVTL G+L+E
Sbjct: 119 RSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEE 178
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
QMRA++LIL KL+ED Y+Q M P++YA + S +YG
Sbjct: 179 QMRAIDLILSKLTEDPHYTQFMNAPFSYAAAYNS----------------------MNYG 216
Query: 241 PNMGGRKFQNNK 252
PN G KFQNNK
Sbjct: 217 PNGAGGKFQNNK 228
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
++ ++ + V++ G V+G+GG I D SGARI++S +F GTTDR +
Sbjct: 224 FQNNKEDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKV 283
Query: 86 MISGTIDEILRAVDLVIDKLLT 107
I+G+ I A +++ K+ +
Sbjct: 284 TITGSQRAIRAAESMIMQKVAS 305
>gi|296085941|emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/252 (59%), Positives = 188/252 (74%), Gaps = 24/252 (9%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ES+YV SP+V KRS+ P +S +SD EK TYIRFLVSN AG+VIGKGGSTINDF
Sbjct: 49 MESPESAYVSSPEVPPKRSSPP-RSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDF 107
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
QSQSGARIQLSR+HEFFPGT+DRIIMISG +EI++A++L++ KLL+E+H ED D+
Sbjct: 108 QSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTED-GDEADP 166
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
++K+RLIVPNSSCG IIGK G+TIKSF++DSQA IKIS D++Y GL DRLVTL G+L+E
Sbjct: 167 RSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEE 226
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
QMRA++LIL KL+ED Y+Q M P++YA + S +YG
Sbjct: 227 QMRAIDLILSKLTEDPHYTQFMNAPFSYAAAYNS----------------------MNYG 264
Query: 241 PNMGGRKFQNNK 252
PN G KFQNNK
Sbjct: 265 PNGAGGKFQNNK 276
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
++ ++ + V++ G V+G+GG I D SGARI++S +F GTTDR +
Sbjct: 272 FQNNKEDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKV 331
Query: 86 MISGTIDEILRAVDLVIDKLLT 107
I+G+ I A +++ K+ +
Sbjct: 332 TITGSQRAIRAAESMIMQKVAS 353
>gi|255583738|ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
gi|223527642|gb|EEF29753.1| Far upstream element-binding protein, putative [Ricinus communis]
Length = 314
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/253 (58%), Positives = 188/253 (74%), Gaps = 24/253 (9%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSL-SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIND 59
ME+ ESSYV SP+ ++ + P +SD EKPTY+RFLVSN AG+VIGKGG+TI D
Sbjct: 1 MESTESSYVSSPEAPPRKRSPPPPKSPTSDSVEKPTYVRFLVSNAAAGSVIGKGGATITD 60
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG 119
FQSQSGARIQLSR++EFFPGT+DRII+ISG +D++L+ V+LV+ KLL+ELH ED DDV
Sbjct: 61 FQSQSGARIQLSRNYEFFPGTSDRIILISGILDDVLKGVELVLAKLLSELHTED-GDDVD 119
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+TK+RL+VPNSSCGSIIGK G+ IKSF+++SQA IKIS D+++YGLNDRLVT+TGTL+
Sbjct: 120 PRTKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLE 179
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHY 239
EQMRA++LIL KL +D Y QTM P++Y AV +N+ +Y
Sbjct: 180 EQMRAIDLILSKLYDDPHYVQTMHAPFSY---------------------AVAYNS-MNY 217
Query: 240 GPNMGGRKFQNNK 252
G N G KFQNNK
Sbjct: 218 GANGAGGKFQNNK 230
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 26/191 (13%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + T +R +V N G++IGKGGS I F +S A I++S F G DR++ ++
Sbjct: 116 DDVDPRTKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVT 175
Query: 89 GTIDEILRAVDLVIDKLLTE------LHA-----------EDQADDVGTK---------T 122
GT++E +RA+DL++ KL + +HA A+ G K
Sbjct: 176 GTLEEQMRAIDLILSKLYDDPHYVQTMHAPFSYAVAYNSMNYGANGAGGKFQNNKEDRTN 235
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
+ + V ++ G ++G+ G I S A IKIS G NDR + +TG+
Sbjct: 236 SVTIGVADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSGTNDRKIIITGSQRAIR 295
Query: 183 RALELILLKLS 193
A +I+ K++
Sbjct: 296 TAEGMIMQKVA 306
>gi|449449385|ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/221 (66%), Positives = 180/221 (81%), Gaps = 5/221 (2%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ESSYV SP+ KRS P KS +SD EK TYIRFLVSN AG+VIGKGGSTINDF
Sbjct: 1 MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 60
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
QSQSGARIQLSR+HEFFPGTTDRIIM+SG+I+EIL+A++LV+ KLL+ELHAE + DDV
Sbjct: 61 QSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAE-EGDDVEP 119
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+TK+RLIVP+SSCG+IIGK G+TIKSF++DSQA IKIS D++Y DRLVTL+GT++E
Sbjct: 120 RTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEE 179
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPY 221
QMRA +LI+ KLSED Y+Q+M P++Y + F+ M Y
Sbjct: 180 QMRATDLIVSKLSEDPHYTQSMNYPFSYP----TSFNAMNY 216
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ + VS+ G V+G+GG I + SGARI++S +F GTTDR + I+G+
Sbjct: 243 ERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQ 302
Query: 92 DEILRAVDLVIDKL 105
I A +++ K+
Sbjct: 303 RAIRAAESMILQKV 316
>gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 145/263 (55%), Positives = 186/263 (70%), Gaps = 12/263 (4%)
Query: 1 METNESSYVPSPDVHGKRS-----TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGS 55
ME S Y SP+ KR+ S D EKPT++RFLVSN AG +IGKGGS
Sbjct: 1 MEAPGSPYASSPESAPKRAPRSPPQQQPPSEEGDDKEKPTHLRFLVSNTAAGCIIGKGGS 60
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA 115
TINDFQSQSGARIQLSRSHEFFPGT DRIIM+SG DE+++A++L+++KLL E ++A
Sbjct: 61 TINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVMKAMELILEKLLAEGEEFNEA 120
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
+ + K+RL+VPNSSCG IIGK GATIKSF+++S A IKIS D++Y GL+DRLVT+T
Sbjct: 121 E---ARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVT 177
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
GT D QM A++LIL KLSED Y ++ P+ YAG+ F + G+P G + +P VP+N
Sbjct: 178 GTFDNQMNAIDLILKKLSEDVHYPPNLSSPFPYAGLTFPNYPGVPVGYM---IPQVPYNN 234
Query: 236 AAHYGPNMG-GRKFQNNKVLLPW 257
A +YGPN G G ++QNNK P
Sbjct: 235 AVNYGPNNGYGGRYQNNKPSTPM 257
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 3 TNESSYVPSPDVHGK----RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
N +Y P+ G+ + + P++S +S+ ++ I +++ GAV+G+ G I
Sbjct: 233 NNAVNYGPNNGYGGRYQNNKPSTPMRSPASNEAQESLTIG--IADEHIGAVVGRAGRNIT 290
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ SGARI++S +F GT+DR + I+GT + I A +++ ++
Sbjct: 291 EIIQASGARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRV 337
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ L + + + G+++G+AG I + S A IKIS G +DR VT+TGT +
Sbjct: 266 QESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFISGTSDRKVTITGTSEA 325
Query: 181 QMRALELILLKLS 193
A +I+ ++S
Sbjct: 326 IRTAESMIMQRVS 338
>gi|194701786|gb|ACF84977.1| unknown [Zea mays]
Length = 344
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 184/263 (69%), Gaps = 12/263 (4%)
Query: 1 METNESSYVPSPDVHGKRS-----TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGS 55
ME S Y SP+ KR+ S D EKP ++RFLVSN AG +IGKGGS
Sbjct: 1 MEAPGSPYASSPESAPKRAPRSPPQQQPPSEEGDDKEKPIHLRFLVSNASAGCIIGKGGS 60
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA 115
TINDFQSQSGARIQLSRSHEFFPGT DRIIM+SG E+++A++L+++KLL E ++A
Sbjct: 61 TINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEVMKAMELILEKLLAEGEEFNEA 120
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
+ + K+RL+VPNSSCG IIGK GATIKSF+++S A IKIS D++Y GL+DRLVT+T
Sbjct: 121 E---ARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVT 177
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
GT D QM A++LIL KLSED Y ++ P+ YAG+ F + G+P G + +P VP+N
Sbjct: 178 GTFDNQMNAIDLILKKLSEDVHYPANLSSPFPYAGLTFPSYPGVPVGYM---IPQVPYNN 234
Query: 236 AAHYGPNMG-GRKFQNNKVLLPW 257
A +YGPN G G ++QNNK P
Sbjct: 235 AVNYGPNNGYGGRYQNNKPSTPM 257
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 3 TNESSYVPSPDVHGK----RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
N +Y P+ G+ + + P++S +S+ ++ I +++ GAV+G+ G I
Sbjct: 233 NNAVNYGPNNGYGGRYQNNKPSTPMRSPASNEAQESLTIG--IADEHIGAVVGRAGRNIT 290
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ SGARI++S +F GT+DR + I+GT + I A +++ ++
Sbjct: 291 EIIQASGARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRV 337
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+ L + + + G+++G+AG I + S A IKIS G +DR VT+TGT +
Sbjct: 265 AQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFISGTSDRKVTITGTSE 324
Query: 180 EQMRALELILLKLS 193
A +I+ ++S
Sbjct: 325 AIRTAESMIMQRVS 338
>gi|15237716|ref|NP_196063.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|14030641|gb|AAK52995.1|AF375411_1 AT5g04430/T32M21_30 [Arabidopsis thaliana]
gi|7406447|emb|CAB85549.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21554568|gb|AAM63617.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23507775|gb|AAN38691.1| At5g04430/T32M21_30 [Arabidopsis thaliana]
gi|332003361|gb|AED90744.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 313
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/252 (55%), Positives = 182/252 (72%), Gaps = 23/252 (9%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ES SP+ KRS P S +D EKPT+IRFLVSN AG+VIGKGGSTI +F
Sbjct: 1 MESTESYAAGSPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEF 60
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q++SGARIQLSR+ EFFPGTTDRIIMISG+I E++ ++L++DKL +ELHAED ++V
Sbjct: 61 QAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAED-GNEVEP 119
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ ++RL+VPNSSCG IIGK GATIKSF+++S+A IKIS LD+++YGL+DRLVTL+GT +E
Sbjct: 120 RRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEE 179
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
QMRA++LIL KL+ED YSQ + PY+YA + S +Y
Sbjct: 180 QMRAIDLILAKLTEDDHYSQNVHSPYSYAAGYNS----------------------VNYA 217
Query: 241 PNMGGRKFQNNK 252
PN G K+QN+K
Sbjct: 218 PNGSGGKYQNHK 229
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E T + V++ G V+G+GG I + +GARI++S +F GTTDR + I+G
Sbjct: 231 EASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQ 290
Query: 92 DEILRAVDLVIDKL 105
I +A ++ K+
Sbjct: 291 RAIQQAETMIKQKV 304
>gi|363543195|ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays]
gi|195659123|gb|ACG49029.1| RNA-binding protein Nova-1 [Zea mays]
Length = 344
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 142/263 (53%), Positives = 184/263 (69%), Gaps = 12/263 (4%)
Query: 1 METNESSYVPSPDVHGKRS-----TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGS 55
ME S Y SP+ KR+ S D EKP ++RFLVSN AG +IGKGGS
Sbjct: 1 MEAPGSPYASSPESAPKRAPRSPPQQQPPSEEGDDKEKPIHLRFLVSNASAGCIIGKGGS 60
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA 115
TINDFQSQSGARIQLSRSHEFFPGT DRIIM+SG E+++A++L+++KLL E ++A
Sbjct: 61 TINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEVMKAMELILEKLLAEGEEFNEA 120
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
+ + K+RL+VPN+SCG IIGK GATIKSF+++S A IKIS D++Y GL+DRLVT+T
Sbjct: 121 E---ARPKVRLVVPNNSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVT 177
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
GT D QM A++LIL KLSED Y ++ P+ YAG+ F + G+P G + +P VP+N
Sbjct: 178 GTFDNQMNAIDLILKKLSEDVHYPANLSSPFPYAGLTFPSYPGVPVGYM---IPQVPYNN 234
Query: 236 AAHYGPNMG-GRKFQNNKVLLPW 257
A +YGPN G G ++QNNK P
Sbjct: 235 AVNYGPNNGYGGRYQNNKPSTPM 257
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 3 TNESSYVPSPDVHGK----RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
N +Y P+ G+ + + P++S +S+ ++ I +++ GAV+G+ G I
Sbjct: 233 NNAVNYGPNNGYGGRYQNNKPSTPMRSPASNEAQESLTIG--IADEHIGAVVGRAGRNIT 290
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ SGARI++S +F GT+DR + I+GT + I A +++ ++
Sbjct: 291 EIIQASGARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRV 337
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+ L + + + G+++G+AG I + S A IKIS G +DR VT+TGT +
Sbjct: 265 AQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFISGTSDRKVTITGTSE 324
Query: 180 EQMRALELILLKLS 193
A +I+ ++S
Sbjct: 325 AIRTAESMIMQRVS 338
>gi|223949173|gb|ACN28670.1| unknown [Zea mays]
gi|238010644|gb|ACR36357.1| unknown [Zea mays]
gi|413924015|gb|AFW63947.1| transcribed sequence 1087 protein [Zea mays]
Length = 344
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/264 (54%), Positives = 186/264 (70%), Gaps = 13/264 (4%)
Query: 1 METNESSYVPSPDVHGKRS------TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGG 54
ME S Y SP+ KR+ S D EKPT++RFLVSN AG +IGKGG
Sbjct: 1 MEAPGSPYASSPESAPKRAPRSPPQQQQSPSEEGDDKEKPTHLRFLVSNTAAGCIIGKGG 60
Query: 55 STINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQ 114
STINDFQSQSGARIQLSRS+EFFPGT DRIIM+SG DE+++A++L+++KLL E ++
Sbjct: 61 STINDFQSQSGARIQLSRSNEFFPGTNDRIIMVSGLFDEVMKAMELILEKLLAEGEEFNE 120
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
A+ + K+RL+VPNSSCG IIGK GATIKSF+++S A IKIS D++Y GL+DRLVT+
Sbjct: 121 AE---ARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTI 177
Query: 175 TGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHN 234
TGT D QM A++LIL KLSED Y ++ P+ YAG+ F + G+P G + +P VP++
Sbjct: 178 TGTFDNQMNAIDLILKKLSEDVHYPPNLSSPFPYAGLTFPSYPGVPVGYM---IPQVPYS 234
Query: 235 TAAHYGPNMG-GRKFQNNKVLLPW 257
A +YGPN G G ++QNNK P
Sbjct: 235 NAVNYGPNNGYGGRYQNNKPTTPM 258
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 3 TNESSYVPSPDVHGK----RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
+N +Y P+ G+ + T P++S +S+ ++ I +++ GAV+G+ G I
Sbjct: 234 SNAVNYGPNNGYGGRYQNNKPTTPMRSPASNEAQESLTIG--IADEHIGAVVGRAGRNIT 291
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ SGARI++S ++ GT+DR + I+GT + I A +++ ++
Sbjct: 292 EIIQASGARIKISDRGDYISGTSDRKVTITGTPEAIRTAESMIMQRV 338
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ L + + + G+++G+AG I + S A IKIS G +DR VT+TGT +
Sbjct: 267 QESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDYISGTSDRKVTITGTPEA 326
Query: 181 QMRALELILLKLS 193
A +I+ ++S
Sbjct: 327 IRTAESMIMQRVS 339
>gi|48716278|dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
gi|48716520|dbj|BAD23125.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
Length = 343
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/229 (58%), Positives = 174/229 (75%), Gaps = 6/229 (2%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D EKPT++RFLVSN AG +IGKGGSTIN+FQSQSGARIQLSRSHEFFPGT DRIIM+S
Sbjct: 35 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVS 94
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G DE+++A++L+++KLL E ++A+ + K+RL+VPNSSCG IIGK G+TIKSF+
Sbjct: 95 GLFDEVIKAMELILEKLLAEGEESNEAE---ARPKVRLVVPNSSCGGIIGKGGSTIKSFI 151
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY 208
+DS A IKIS D+++ GL+DRLVT+TG LD QMRA+ LIL KLSED Y ++ P+ Y
Sbjct: 152 EDSHAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPY 211
Query: 209 AGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKVLLPW 257
AG+ F + G+P G + +P VP+N A +YGPN G ++QNNK P
Sbjct: 212 AGLGFPSYPGVPVGYM---IPQVPYNNAVNYGPNGYGGRYQNNKPSTPM 257
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
GAV+G+ G I + SGARI++S +F GT++R + I+GT + I A +++ ++
Sbjct: 279 GAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAAESMIMQRV 337
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+ L + + + G+++G+AG I + S A IKIS G ++R VT+TGT
Sbjct: 265 AQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGT-S 323
Query: 180 EQMRALELILLK 191
E ++A E ++++
Sbjct: 324 EAIQAAESMIMQ 335
>gi|222623934|gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
Length = 313
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 134/229 (58%), Positives = 174/229 (75%), Gaps = 6/229 (2%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D EKPT++RFLVSN AG +IGKGGSTIN+FQSQSGARIQLSRSHEFFPGT DRIIM+S
Sbjct: 5 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVS 64
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G DE+++A++L+++KLL E ++A+ + K+RL+VPNSSCG IIGK G+TIKSF+
Sbjct: 65 GLFDEVIKAMELILEKLLAEGEESNEAE---ARPKVRLVVPNSSCGGIIGKGGSTIKSFI 121
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY 208
+DS A IKIS D+++ GL+DRLVT+TG LD QMRA+ LIL KLSED Y ++ P+ Y
Sbjct: 122 EDSHAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPY 181
Query: 209 AGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKVLLPW 257
AG+ F + G+P G + +P VP+N A +YGPN G ++QNNK P
Sbjct: 182 AGLGFPSYPGVPVGYM---IPQVPYNNAVNYGPNGYGGRYQNNKPSTPM 227
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S+ E +R +V N G +IGKGGSTI F S A I++S F G DR++ +
Sbjct: 88 SNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLVTV 147
Query: 88 SGTIDEILRAVDLVIDKLLTELH 110
+G +D +RA+ L++ KL ++H
Sbjct: 148 TGPLDHQMRAIYLILSKLSEDVH 170
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
GAV+G+ G I + SGARI++S +F GT++R + I+GT + I A +++ ++
Sbjct: 249 GAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAAESMIMQRV 307
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+ L + + + G+++G+AG I + S A IKIS G ++R VT+TGT
Sbjct: 235 AQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGT-S 293
Query: 180 EQMRALELILLK 191
E ++A E ++++
Sbjct: 294 EAIQAAESMIMQ 305
>gi|357137683|ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 349
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/269 (53%), Positives = 185/269 (68%), Gaps = 20/269 (7%)
Query: 1 METNESSYVPSPDVHGKRS------------TAPVKSLSSDPTEKPTYIRFLVSNPLAGA 48
ME S Y SP+ KR+ T P ++ D EKPT++RFLVSN AG
Sbjct: 1 MEAPGSPYASSPETAPKRAPRSPPPPQERPETQP-EAEPEDDKEKPTHLRFLVSNTAAGC 59
Query: 49 VIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+IGKGGSTINDFQSQSGARIQLSRSHEFFPGT DRIIM+SG DE+++A++LV++KLL E
Sbjct: 60 IIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIKAMELVLEKLLAE 119
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
++A+ + K RL+VPNSSCG IIGK GATIK+F++DS A IKIS D+++ GL+
Sbjct: 120 GEEFNEAE---ARPKFRLVVPNSSCGGIIGKGGATIKAFIEDSHAGIKISPQDNNFVGLH 176
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHG-MPYGAVPPP 227
DRLVT+TG + QMRA+ LIL KLSED Y ++ P+ YAG+ F + +P G +
Sbjct: 177 DRLVTITGPFNNQMRAIYLILSKLSEDVHYPPNLSSPFPYAGLGFPSYPAPVPVGYM--- 233
Query: 228 VPAVPHNTAAHYGPNMGGRKFQNNKVLLP 256
+P VP+N A +YGPN G ++QNNK P
Sbjct: 234 IPQVPYNNAVNYGPNGYGGRYQNNKPGTP 262
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
PV+S +++ ++ I V++ GAV+G+ G I + SGARI++S +F GT+
Sbjct: 262 PVRSPATNDAQESHTIG--VADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTS 319
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
DR + I+GT + I A +++ ++
Sbjct: 320 DRKVTITGTPEAIQAAESMIMQRV 343
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALEL 187
V + G+++G+AG I + S A IKIS G +DR VT+TGT + A +
Sbjct: 279 VADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRKVTITGTPEAIQAAESM 338
Query: 188 ILLKLS 193
I+ ++S
Sbjct: 339 IMQRVS 344
>gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 136/237 (57%), Positives = 173/237 (72%), Gaps = 15/237 (6%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D EKPT++RFLVSN AG +IGKGGSTINDFQSQSGARIQLSRSHEFFPGT DRIIM+S
Sbjct: 43 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 102
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G DE+++A++LV++KLL+E ++A+ + K RL+VPNSSCG IIGK GATIKSF+
Sbjct: 103 GLFDEVVKAMELVLEKLLSEGEESNEAE---ARPKFRLVVPNSSCGGIIGKGGATIKSFI 159
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY 208
+DS A IKIS D+++ GL+DRLVT+TG L+ QMRA+ LIL KLSED Y ++ P+ Y
Sbjct: 160 EDSHAGIKISPQDNNFVGLHDRLVTITGPLNSQMRAIHLILSKLSEDVHYPPNLSSPFPY 219
Query: 209 AGVFFSGF-HGMPYGAVPPPVPAVPHNTAAHYGPN--------MGGRKFQNNKVLLP 256
AG+ F + +P G + PP VP+N +YGPN GG ++QNNK P
Sbjct: 220 AGLGFPSYPAAVPVGYMIPP---VPYNNTVNYGPNGYAAPGGGGGGGRYQNNKPGTP 273
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
PV+S +++ ++ I V++ GAV+G+ G I + SGARI++S +F GT+
Sbjct: 273 PVRSPANNDAQESHTIG--VADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTS 330
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
DR + I+G+ + I A +++ ++
Sbjct: 331 DRKVTITGSSEAIQAAEAMIMQRV 354
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALEL 187
V + G+++G+AG I + S A IKIS G +DR VT+TG+ E ++A E
Sbjct: 290 VADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRKVTITGS-SEAIQAAEA 348
Query: 188 ILLK 191
++++
Sbjct: 349 MIMQ 352
>gi|118486946|gb|ABK95306.1| unknown [Populus trichocarpa]
Length = 313
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/252 (54%), Positives = 176/252 (69%), Gaps = 23/252 (9%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
ME+ ESSYV SP+ K+S P S SD EKPTYI+ LVSN AG+VIGKGG+TI DF
Sbjct: 1 MESTESSYVSSPEQPRKKSPPPPASPLSDAVEKPTYIKLLVSNAAAGSVIGKGGATITDF 60
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
QSQSGARIQLS+++EFFPGT+DRII+ISG ID+ L+A++L+I KLL+E+ ED DD
Sbjct: 61 QSQSGARIQLSKNYEFFPGTSDRIILISGGIDDALKALELIIAKLLSEIPTED-GDDAEP 119
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ ++RL+VPN++CGSIIGK G+ IKSF+++S A IKIS LD + GL DRLV +TGTL+E
Sbjct: 120 RMRVRLVVPNNACGSIIGKGGSIIKSFIEESHAGIKISPLDTDFLGLTDRLVAITGTLEE 179
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
QM A++LIL KL++DT Y Q M P +YA + S HG+
Sbjct: 180 QMHAIDLILSKLTDDTHYLQNMHAPLSYAAAYNSTNHGL--------------------- 218
Query: 241 PNMGGRKFQNNK 252
N G KFQ+NK
Sbjct: 219 -NGAGVKFQHNK 229
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 26/191 (13%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D E +R +V N G++IGKGGS I F +S A I++S F G TDR++ I+
Sbjct: 115 DDAEPRMRVRLVVPNNACGSIIGKGGSIIKSFIEESHAGIKISPLDTDFLGLTDRLVAIT 174
Query: 89 GTIDEILRAVDLVIDKL------LTELHA--------------------EDQADDVGTKT 122
GT++E + A+DL++ KL L +HA + Q +
Sbjct: 175 GTLEEQMHAIDLILSKLTDDTHYLQNMHAPLSYAAAYNSTNHGLNGAGVKFQHNKEDRTN 234
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
+ + V + G ++G+ G I +S A IKIS G NDR +T+TG+
Sbjct: 235 SVTIGVADEHIGLVVGRGGRNIMEISQNSGARIKISDRGDFMSGTNDRKITITGSQRAIH 294
Query: 183 RALELILLKLS 193
A ++I+ K+S
Sbjct: 295 AAEDMIMQKVS 305
>gi|226504964|ref|NP_001141009.1| uncharacterized protein LOC100273088 [Zea mays]
gi|194702154|gb|ACF85161.1| unknown [Zea mays]
Length = 221
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 157/216 (72%), Gaps = 6/216 (2%)
Query: 1 METNESSYVPSPDVHGKRS-----TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGS 55
ME S Y SP+ KR+ S D EKP ++RFLVSN AG +IGKGGS
Sbjct: 1 MEAPGSPYASSPESAPKRAPRSPPQQQPPSEEGDDKEKPIHLRFLVSNASAGCIIGKGGS 60
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-LHAEDQ 114
TINDFQSQSGARIQLSRSHEFFPGT DRIIM+SG E+++A++L+++KLL E L+ ++
Sbjct: 61 TINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEVMKAMELILEKLLAELLYQGEE 120
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
++ + K+RL+VPNSSCG IIGK GATIKSF+++S A IKIS D++Y GL+DRLVT+
Sbjct: 121 FNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTV 180
Query: 175 TGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
TGT D QM A++LIL KLSED Y ++ P+ YAG
Sbjct: 181 TGTFDNQMNAIDLILKKLSEDVHYPANLSSPFPYAG 216
>gi|358348269|ref|XP_003638170.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
gi|358348273|ref|XP_003638172.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
gi|355504105|gb|AES85308.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
gi|355504107|gb|AES85310.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
Length = 177
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 122/180 (67%), Positives = 145/180 (80%), Gaps = 6/180 (3%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDP---TEKPTYIRFLVSNPLAGAVIGKGGSTI 57
ME+ ESSYV SP+ G R A S EKPTY+RFLVSN AG+VIGKGGSTI
Sbjct: 1 MESPESSYVSSPE--GPRKHASSPPPDSPSQDSVEKPTYVRFLVSNSAAGSVIGKGGSTI 58
Query: 58 NDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADD 117
DFQSQSGARIQLSR++EFFPGTTDRIIM+SG I+E+LRAV+L++ KLL+ELH+ED +D
Sbjct: 59 TDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEVLRAVELILSKLLSELHSEDD-ND 117
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
V KTK+RLIVPN SCG IIGK GATI+SF+++SQA IKIS D+SYYG NDR+VT+TGT
Sbjct: 118 VEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEESQAGIKISPQDNSYYGQNDRIVTVTGT 177
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
T +R +V NS+ GS+IGK G+TI F S A I++SR + + G DR++ ++G ++E
Sbjct: 36 TYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEV 95
Query: 182 MRALELILLKL 192
+RA+ELIL KL
Sbjct: 96 LRAVELILSKL 106
>gi|116787292|gb|ABK24450.1| unknown [Picea sitchensis]
Length = 357
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/281 (48%), Positives = 188/281 (66%), Gaps = 14/281 (4%)
Query: 2 ETNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQ 61
E+ S Y SP KR + S D ++ + +R LVSN AG+VIGKGG+T++DFQ
Sbjct: 14 ESPASGYSTSPSRSPKRD-GLIYEPSEDGSKTSSCLRLLVSNAAAGSVIGKGGATVSDFQ 72
Query: 62 SQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK 121
+QSGARIQLSR+HEFFPGTTDRII+++G+I+EIL A +L++ KLL+E AED +DV K
Sbjct: 73 TQSGARIQLSRNHEFFPGTTDRIILVTGSINEILTAANLILQKLLSE--AEDN-NDVDEK 129
Query: 122 T-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
T ++RL++PNS CG IIGK GATIKSF++ SQA IK+S D G++DRLVT+TGTL++
Sbjct: 130 TSQVRLVLPNSVCGGIIGKGGATIKSFVEHSQASIKLSSQDQILPGVSDRLVTITGTLEQ 189
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
Q+RA+ LI+ KL+ED Y+Q P +Y G +G G+P G P +P+ ++ YG
Sbjct: 190 QLRAIFLIVSKLAEDPNYAQYANAPLSYTGGSVAGIQGIPGGYTPVGY-GLPNYGSSVYG 248
Query: 241 PNMGGRKFQNNKVLLPWPLNPVGMLLIILIAQPIICHFSLS 281
N +NNK L+ PL V M + I P++ +L+
Sbjct: 249 VNA-----RNNKGLM-APL--VAMRSPLPIGVPLVASGALT 281
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T ++ V + G ++G+ G TI D Q SGA+I++S +F GT DR + ISG ID +
Sbjct: 281 TSVKMAVPDDRVGVIVGRAGRTILDIQQVSGAKIKISDRGDFISGTNDRQVTISGPIDAV 340
Query: 95 LRAVDLVIDKLLTELH 110
A ++ +L ++L
Sbjct: 341 QHARHMLEQRLSSDLE 356
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G T +++ VP+ G I+G+AG TI S A IKIS G NDR VT++G +
Sbjct: 278 GALTSVKMAVPDDRVGVIVGRAGRTILDIQQVSGAKIKISDRGDFISGTNDRQVTISGPI 337
Query: 179 DEQMRALELILLKLSED 195
D A ++ +LS D
Sbjct: 338 DAVQHARHMLEQRLSSD 354
>gi|302800040|ref|XP_002981778.1| hypothetical protein SELMODRAFT_179092 [Selaginella moellendorffii]
gi|300150610|gb|EFJ17260.1| hypothetical protein SELMODRAFT_179092 [Selaginella moellendorffii]
Length = 310
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 155/230 (67%), Gaps = 9/230 (3%)
Query: 11 SPDVHG---KRSTA-PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGA 66
SP+ G KR+ +KS S D + RFLVSN AG+VIGKGG+TI+D QSQSGA
Sbjct: 8 SPEPRGGSPKRARGGSMKSSSEDGNGSQSSARFLVSNAEAGSVIGKGGATISDLQSQSGA 67
Query: 67 RIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRL 126
RIQLSRS +FFPGTTDR++++SG I+++L A++L++ K+ E + Q D +LRL
Sbjct: 68 RIQLSRSQDFFPGTTDRVVVLSGAINDVLTALNLILSKIQKETEDDSQTDS--KPNQLRL 125
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALE 186
+VPNS CG+IIGK G TIKSF++DS+A IK+S + G++DRLVT+TG++++Q++A+E
Sbjct: 126 VVPNSVCGAIIGKGGGTIKSFIEDSEASIKLSGI---LQGISDRLVTITGSIEQQLKAVE 182
Query: 187 LILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTA 236
LIL KL D+ Y P +Y + F F PY + P + + P T+
Sbjct: 183 LILTKLLGDSSYLDYAAAPLSYTVICFKLFRLAPYPVLLPVLESCPVTTS 232
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 84/179 (46%), Gaps = 30/179 (16%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S KP +R +V N + GA+IGKGG TI F S A I+LS G +DR++ I
Sbjct: 114 SQTDSKPNQLRLVVPNSVCGAIIGKGGGTIKSFIEDSEASIKLS---GILQGISDRLVTI 170
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQA--------------------------DDVGTK 121
+G+I++ L+AV+L++ KLL + D A +
Sbjct: 171 TGSIEQQLKAVELILTKLLGDSSYLDYAAAPLSYTVICFKLFRLAPYPVLLPVLESCPVT 230
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS-RLDHSYYGLNDRLVTLTGTLD 179
T + L VP+ G+I+G+ G T+ S IKIS R D N R VTL GT +
Sbjct: 231 TSITLAVPDEHIGAIVGRGGKTLGEIQQASGVTIKISERGDFVSGTKNSRKVTLVGTAE 289
>gi|302768295|ref|XP_002967567.1| hypothetical protein SELMODRAFT_88821 [Selaginella moellendorffii]
gi|300164305|gb|EFJ30914.1| hypothetical protein SELMODRAFT_88821 [Selaginella moellendorffii]
Length = 272
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 142/199 (71%), Gaps = 5/199 (2%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
RFLVSN AG+VIGKGG+TI+D QSQSGARIQLSRS +FFPGTTDR++++SG I+++L A
Sbjct: 1 RFLVSNAEAGSVIGKGGATISDLQSQSGARIQLSRSQDFFPGTTDRVVVLSGAINDVLTA 60
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
++L++ K+ E + Q D +LRL+VPNS CG+IIGK G TIKSF++DS+A IK+
Sbjct: 61 LNLILSKIQKETEDDSQTDS--KPNQLRLVVPNSVCGAIIGKGGGTIKSFIEDSEASIKL 118
Query: 158 SRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
S + G++DRLVT+TG++++Q++A+ELIL KL D+ Y P +Y + F F
Sbjct: 119 SGI---LQGISDRLVTITGSIEQQLKAVELILTKLLGDSSYLDYAAAPLSYTVICFKLFR 175
Query: 218 GMPYGAVPPPVPAVPHNTA 236
PY + P + + P T+
Sbjct: 176 LAPYPVLLPVLESCPVTTS 194
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 84/179 (46%), Gaps = 30/179 (16%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S KP +R +V N + GA+IGKGG TI F S A I+LS G +DR++ I
Sbjct: 76 SQTDSKPNQLRLVVPNSVCGAIIGKGGGTIKSFIEDSEASIKLS---GILQGISDRLVTI 132
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQA--------------------------DDVGTK 121
+G+I++ L+AV+L++ KLL + D A +
Sbjct: 133 TGSIEQQLKAVELILTKLLGDSSYLDYAAAPLSYTVICFKLFRLAPYPVLLPVLESCPVT 192
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS-RLDHSYYGLNDRLVTLTGTLD 179
T + L VP+ G+I+G+ G T+ S IKIS R D N R VTL GT +
Sbjct: 193 TSITLAVPDEHIGAIVGRGGKTLGEIQQASGVTIKISERGDFVSGTKNSRKVTLVGTAE 251
>gi|218191842|gb|EEC74269.1| hypothetical protein OsI_09495 [Oryza sativa Indica Group]
Length = 263
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 127/173 (73%), Gaps = 6/173 (3%)
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
PGT DRIIM+SG DE+++A++L+++KLL E ++A+ + K+RL+VPNSSCG II
Sbjct: 5 PGTNDRIIMVSGLFDEVIKAMELILEKLLAEGEESNEAE---ARPKVRLVVPNSSCGGII 61
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
GK G+TIKSF++DS A IKIS D+++ GL+DRLVT+TG LD QMRA+ LIL KLSED
Sbjct: 62 GKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVH 121
Query: 198 YSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQN 250
Y ++ P+ YAG+ F + G+P G + +P VP+N A +YGPN G ++QN
Sbjct: 122 YPPNLSSPFPYAGLGFPSYPGVPVGYM---IPQVPYNNAVNYGPNGYGGRYQN 171
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S+ E +R +V N G +IGKGGSTI F S A I++S F G DR++ +
Sbjct: 39 SNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLVTV 98
Query: 88 SGTIDEILRAVDLVIDKLLTELH 110
+G +D +RA+ L++ KL ++H
Sbjct: 99 TGPLDHQMRAIYLILSKLSEDVH 121
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
GAV+G+ G I + SGARI++S +F GT++R + I+GT + I A +++ ++
Sbjct: 199 GAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAAESMIMQRV 257
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+ L + + + G+++G+AG I + S A IKIS G ++R VT+TGT
Sbjct: 185 AQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGT-S 243
Query: 180 EQMRALELILLK 191
E ++A E ++++
Sbjct: 244 EAIQAAESMIMQ 255
>gi|302766557|ref|XP_002966699.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
gi|300166119|gb|EFJ32726.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
Length = 324
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 135/185 (72%), Gaps = 5/185 (2%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E T +RFLV+N AG+VIGKGGSTI+DFQ+QSGARIQLSR+HE+FPGT+DR+ ++SG++
Sbjct: 12 ETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGSL 71
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
++L A L+I K++ +D DD + +++L+VP + CG+IIGK G+ IK F++DS
Sbjct: 72 ADVLTAFQLIISKII----KDDNQDDTKS-IQVKLLVPKTVCGAIIGKGGSNIKKFVEDS 126
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGV 211
QA IK+S D G+ DR+VT+ G +D+ ++A+ LIL KL+E++ Y++T + P Y G
Sbjct: 127 QASIKLSSQDQLLPGVIDRIVTIGGNVDQIIKAVTLILTKLTEESSYTETTSTPLVYPGT 186
Query: 212 FFSGF 216
+ F
Sbjct: 187 RPTSF 191
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G ++G+ G T+ + Q SGA+I++S +F GT R + + G+ + I A L+ K+
Sbjct: 237 GFILGRAGKTLQELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGEAIQAAQFLLTQKVQ 296
Query: 107 TELHAEDQADD 117
L ++ + D+
Sbjct: 297 QSLASDYERDN 307
>gi|302792551|ref|XP_002978041.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
gi|300154062|gb|EFJ20698.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
Length = 324
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 133/179 (74%), Gaps = 5/179 (2%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E T +RFLV+N AG+VIGKGGSTI+DFQ+QSGARIQLSR+HE+FPGT+DR+ ++SG++
Sbjct: 12 ETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGSL 71
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
++L A L+I K++ +D DD + +++L+VP + CG+IIGK G+ IK F++DS
Sbjct: 72 ADVLTAFQLIISKII----KDDNQDDTKS-IQVKLLVPKTVCGAIIGKGGSNIKKFVEDS 126
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG 210
QA IK+S D G+ DR+VT+ G +D+ ++A+ LIL KL+E++ Y++T + P Y G
Sbjct: 127 QASIKLSSQDQLLPGVIDRIVTIGGNVDQIIKAVTLILTKLTEESSYTETTSTPLVYPG 185
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G ++G+ G T+ + Q SGA+I++S +F GT R + + G+ + I A L+ K+
Sbjct: 237 GFILGRAGKTLQELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGEAIQAAQFLLTQKVQ 296
Query: 107 TELHAEDQADD 117
L ++ + D+
Sbjct: 297 QSLASDYERDN 307
>gi|223973385|gb|ACN30880.1| unknown [Zea mays]
Length = 254
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 123/173 (71%), Gaps = 7/173 (4%)
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
M+SG E+++A++L+++KLL E ++A+ + K+RL+VPNSSCG IIGK GATIK
Sbjct: 1 MVSGLFGEVMKAMELILEKLLAEGEEFNEAE---ARPKVRLVVPNSSCGGIIGKGGATIK 57
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
SF+++S A IKIS D++Y GL+DRLVT+TGT D QM A++LIL KLSED Y ++ P
Sbjct: 58 SFIEESHAGIKISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSSP 117
Query: 206 YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMG-GRKFQNNKVLLPW 257
+ YAG+ F + G+P G + +P VP+N A +YGPN G G ++QNNK P
Sbjct: 118 FPYAGLTFPSYPGVPVGYM---IPQVPYNNAVNYGPNNGYGGRYQNNKPSTPM 167
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +V N G +IGKGG+TI F +S A I++S + G DR++ ++GT D +
Sbjct: 36 VRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVTGTFDNQMN 95
Query: 97 AVDLVIDKLLTELH 110
A+DL++ KL ++H
Sbjct: 96 AIDLILKKLSEDVH 109
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 3 TNESSYVPSPDVHGK----RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
N +Y P+ G+ + + P++S +S+ ++ I +++ GAV+G+ G I
Sbjct: 143 NNAVNYGPNNGYGGRYQNNKPSTPMRSPASNEAQESLTIG--IADEHIGAVVGRAGRNIT 200
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ SGARI++S +F GT+DR + I+GT + I A +++ ++
Sbjct: 201 EIIQASGARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRV 247
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+ L + + + G+++G+AG I + S A IKIS G +DR VT+TGT +
Sbjct: 175 AQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFISGTSDRKVTITGTSE 234
Query: 180 EQMRALELILLKLS 193
A +I+ ++S
Sbjct: 235 AIRTAESMIMQRVS 248
>gi|255071283|ref|XP_002507723.1| predicted protein [Micromonas sp. RCC299]
gi|226522998|gb|ACO68981.1| predicted protein [Micromonas sp. RCC299]
Length = 287
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 142/233 (60%), Gaps = 19/233 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++FL+ + AG++IGKGG+T+N+ QSQ+G+RIQLSR+ E FPGT DRI+ + GT IL
Sbjct: 5 LKFLLPDSAAGSIIGKGGATVNELQSQTGSRIQLSRATEVFPGTKDRIVTVYGTAPSILG 64
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A L+I KL+ D VG + ++L++PN+SCG IIG+ GATI++F DDSQA IK
Sbjct: 65 AFHLMISKLV-----RDGEGLVGGRPHVKLVIPNASCGCIIGRGGATIRNFADDSQAEIK 119
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGF 216
+S +H G+N+R++T+TG D +RA+ L+ LS+D Y + ++ P TY
Sbjct: 120 LSSQEHMLPGVNERVLTITGANDRVLRAIALVATALSQDGCYEELISRPSTYT------I 173
Query: 217 HGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKVL---LPWPLNPVGMLL 266
GMP P + ++ AA N+ + Q+ V+ + P +G +L
Sbjct: 174 DGMPM-----PYSGINNDFAAAVNHNVEHGRSQDGDVISVAIDVPDEHIGAVL 221
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 82/194 (42%), Gaps = 40/194 (20%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ ++ N G +IG+GG+TI +F S A I+LS PG +R++ I+G D +L
Sbjct: 86 HVKLVIPNASCGCIIGRGGATIRNFADDSQAEIKLSSQEHMLPGVNERVLTITGANDRVL 145
Query: 96 RAVDLVI-----DKLLTEL--------------------------------HAEDQADDV 118
RA+ LV D EL H Q DV
Sbjct: 146 RAIALVATALSQDGCYEELISRPSTYTIDGMPMPYSGINNDFAAAVNHNVEHGRSQDGDV 205
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
+ + VP+ G+++GK G TI S IK+S G +R VTLTG
Sbjct: 206 ---ISVAIDVPDEHIGAVLGKGGRTISEIQITSGIRIKVSERGDYVEGTKNRRVTLTGAG 262
Query: 179 DEQMRALELILLKL 192
D+ A L+ KL
Sbjct: 263 DKVQMARFLLEQKL 276
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GAV+GKGG TI++ Q SG RI++S ++ GT +R + ++G D++ A L+ KL
Sbjct: 218 GAVLGKGGRTISEIQITSGIRIKVSERGDYVEGTKNRRVTLTGAGDKVQMARFLLEQKLC 277
Query: 107 TELHAED 113
E+
Sbjct: 278 ASASVEE 284
>gi|145341361|ref|XP_001415781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576004|gb|ABO94073.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 340
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 144/241 (59%), Gaps = 8/241 (3%)
Query: 27 SSDPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
S+ P + ++ ++FL+S AG+VIGKGG+TIN+FQ+ +GARIQLSR+ E FPGT DR++
Sbjct: 36 SAAPIDDGSFTLKFLISPSAAGSVIGKGGATINEFQALTGARIQLSRNREVFPGTNDRVV 95
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
++SG + IL+ + L+I KL+ A+ + D + ++ L+VPNSSCG IIGK G+ I+
Sbjct: 96 IVSGDLSAILQVLHLIITKLV----ADGEGIDRMGQPQVALVVPNSSCGCIIGKGGSKIR 151
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
SF++DSQA IK+S D G NDR +T+TGT+D +RA+ L+ L ED Y+ +
Sbjct: 152 SFVEDSQADIKLSNQDRMLPGCNDRTLTITGTIDCVLRAVALVATTLCEDPAYATLVHRQ 211
Query: 206 YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKVLLPWPLNPVGML 265
TY+ + G T YG GG + +L+ P + +G +
Sbjct: 212 STYS---VQSPLSLQGGGGGRRSGEFNRATPRRYGAGQGGGRDDETSILVTIPDSLIGAV 268
Query: 266 L 266
L
Sbjct: 269 L 269
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 83/196 (42%), Gaps = 39/196 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ +V N G +IGKGGS I F S A I+LS PG DR + I+GTID +LR
Sbjct: 130 VALVVPNSSCGCIIGKGGSKIRSFVEDSQADIKLSNQDRMLPGCNDRTLTITGTIDCVLR 189
Query: 97 AVDLVIDKLL------TELHAED---------------------------------QADD 117
AV LV L T +H + Q
Sbjct: 190 AVALVATTLCEDPAYATLVHRQSTYSVQSPLSLQGGGGGRRSGEFNRATPRRYGAGQGGG 249
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+T + + +P+S G+++G+ G TI S IK+S D + G +R V ++G+
Sbjct: 250 RDDETSILVTIPDSLIGAVLGRGGRTIAEVQVASGCRIKVSDRDDFFEGTRNRKVVISGS 309
Query: 178 LDEQMRALELILLKLS 193
+ A L+ KLS
Sbjct: 310 AEGVQMANYLLTQKLS 325
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
+ T I + + L GAV+G+GG TI + Q SG RI++S +FF GT +R ++ISG+
Sbjct: 251 DDETSILVTIPDSLIGAVLGRGGRTIAEVQVASGCRIKVSDRDDFFEGTRNRKVVISGSA 310
Query: 92 DEILRAVDLVIDKL 105
+ + A L+ KL
Sbjct: 311 EGVQMANYLLTQKL 324
>gi|384248088|gb|EIE21573.1| hypothetical protein COCSUDRAFT_17393 [Coccomyxa subellipsoidea
C-169]
Length = 311
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 150/265 (56%), Gaps = 37/265 (13%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ +FL+SN AG++IGKGG+ I++ QSQSGAR+QLSR+ EFFPGT +R+++ SG++
Sbjct: 39 EQKVIAKFLMSNAAAGSIIGKGGANISELQSQSGARLQLSRASEFFPGTQERVMLASGSV 98
Query: 92 DEILRAVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+++L A+ L++ K+ E + A D G T+LRL+VP CG+IIGK GATI+SF +
Sbjct: 99 NQVLTALHLILTKIQGEQSMMARD-----GKSTQLRLLVPTPLCGAIIGKGGATIRSFAE 153
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
DS+A I +S D G+ DR+V +TG D+ +RA+ L+L KL E Y++ T +Y
Sbjct: 154 DSRAAITVSPQDKQPLGIPDRVVRITGAQDQLLRAVALLLTKLVESPNYTRFTTSNVSYG 213
Query: 210 GVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGG----RKFQNNKVLLPWPLNPVGML 265
PPP H G G ++ Q +V +P P VG
Sbjct: 214 ---------------PPP---------QHMGYQQKGYMQPQQQQRMEVTVPVPEARVGA- 248
Query: 266 LIILIAQPIICHFSLSIYEEIRLNE 290
II +I I +IR+++
Sbjct: 249 -IIGKGGEVISQLKSVIGVKIRISD 272
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
GA+IGKGG I+ +S G +I++S +F PGT +R + ISG D + A L+ K+
Sbjct: 247 GAIIGKGGEVISQLKSVIGVKIRISDRDDFVPGTRNRKVTISGAADAVQIAQVLIHQKI 305
>gi|357123010|ref|XP_003563206.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 311
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 119/167 (71%), Gaps = 6/167 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
K ++ FLVS+ AG +IGK GS + +SQSGARI +SR + FPGTT R++++SG +
Sbjct: 25 KKKHVMFLVSHMEAGCIIGKAGSIVKSMESQSGARINISRHDQLFPGTTSRVVLVSGLFN 84
Query: 93 EILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
+++ A++L++++L ++ DQ D +K + L+VP+ CG++IGK GAT+K+ +
Sbjct: 85 QLMDAMELILERL---VYQGDQVID--SKATIALVVPSVCCGALIGKGGATLKAITQKAS 139
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
A IKIS D+S YGL+DRLVT+TG+LD Q+RA+ LIL KL ED LYS
Sbjct: 140 AGIKISPQDNS-YGLHDRLVTITGSLDNQLRAIFLILSKLLEDVLYS 185
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%)
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
Q D G K + +V + G IIGKAG+ +KS S A I ISR D + G R+V
Sbjct: 19 QGSDGGKKKHVMFLVSHMEAGCIIGKAGSIVKSMESQSGARINISRHDQLFPGTTSRVVL 78
Query: 174 LTGTLDEQMRALELILLKL 192
++G ++ M A+ELIL +L
Sbjct: 79 VSGLFNQLMDAMELILERL 97
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
PV+S D + Y+ +++ GAVIG+ G +IN+ SGA I++S +F T
Sbjct: 222 PVRS--PDKNDGQEYLTIAIADEHIGAVIGRAGRSINEITQVSGACIRISAKGDFIADTC 279
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
DR ++ISGT + I A +++ ++
Sbjct: 280 DREVVISGTPEAIQAAEAMIMHRV 303
>gi|459269|emb|CAA54960.1| transcribed sequence 1087 [Zea mays]
Length = 228
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 101/143 (70%), Gaps = 4/143 (2%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
++ + K+R +VPNSSCG IIGK GATIKSF+++S A IKIS D++Y GL+DRLVT+T
Sbjct: 3 NEAEARPKVRPVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTIT 62
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNT 235
GT D QM A++LIL KLSED Y ++ P+ YAG+ F + G+P G + +P VP++
Sbjct: 63 GTFDNQMNAIDLILKKLSEDVHYPPNLSSPFPYAGLTFPSYPGVPVGYM---IPQVPYSN 119
Query: 236 AAHYGPNMG-GRKFQNNKVLLPW 257
A +YGPN G G ++QNNK P
Sbjct: 120 AVNYGPNNGYGGRYQNNKPTTPM 142
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +V N G +IGKGG+TI F +S A I++S + G DR++ I+GT D +
Sbjct: 11 VRPVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTITGTFDNQMN 70
Query: 97 AVDLVIDKLLTELH 110
A+DL++ KL ++H
Sbjct: 71 AIDLILKKLSEDVH 84
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 3 TNESSYVPSPDVHGK----RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
+N +Y P+ G+ + T P++S +S+ E + +++ GAV+G+ G I
Sbjct: 118 SNAVNYGPNNGYGGRYQNNKPTTPMRSPASN--EAQESLTIGIADEHIGAVVGRAGRNIT 175
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ SGARI++S ++ GT+DR + I+GT + I A +++ ++
Sbjct: 176 EIIQASGARIKISDRGDYISGTSDRKVTITGTPEAIRTAESMIMQRV 222
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ L + + + G+++G+AG I + S A IKIS G +DR VT+TGT +
Sbjct: 151 QESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDYISGTSDRKVTITGTPEA 210
Query: 181 QMRALELILLKLS 193
A +I+ ++S
Sbjct: 211 IRTAESMIMQRVS 223
>gi|308798859|ref|XP_003074209.1| putative RNA-binding protein (ISS) [Ostreococcus tauri]
gi|116000381|emb|CAL50061.1| putative RNA-binding protein (ISS) [Ostreococcus tauri]
Length = 308
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 101/140 (72%), Gaps = 4/140 (2%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++FL+S AG+VIGKGG+TIN+FQ+ +GAR+QLSRS E FPGT DR++++SG ++ IL+
Sbjct: 42 LKFLISPSAAGSVIGKGGATINEFQALTGARVQLSRSREVFPGTNDRVVIVSGDLNAILQ 101
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+ L+ LT+L A+ + D +L L+VPN CG +IGK G+ I++F++DSQA IK
Sbjct: 102 VLYLI----LTKLVADGEGIDRSGTPQLALVVPNGCCGCVIGKGGSKIRNFVEDSQADIK 157
Query: 157 ISRLDHSYYGLNDRLVTLTG 176
+S D G NDR +T+TG
Sbjct: 158 LSNQDRMLPGCNDRTLTITG 177
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
+V N G VIGKGGS I +F S A I+LS PG DR + I+G
Sbjct: 127 LVVPNGCCGCVIGKGGSKIRNFVEDSQADIKLSNQDRMLPGCNDRTLTITGRWIATYSVQ 186
Query: 99 DLVIDKLLTELHAEDQADDVGT--------KTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+ ++ + D V +T + + +P+S G+++G+ G TI
Sbjct: 187 APLGARIGGGRRSGDHGRSVSGSSRRGGDDETSILVTIPDSLIGAVLGRGGRTIAEVQVA 246
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
S IK+S D + G +R V +TG+ + A L+ KLS
Sbjct: 247 SGCRIKVSARDDFFEGTRNRKVVITGSQEGVQMANYLLTQKLS 289
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+ ++ S+ GS+IGK GATI F + A +++SR + G NDR+V ++G L+ ++
Sbjct: 42 LKFLISPSAAGSVIGKGGATINEFQALTGARVQLSRSREVFPGTNDRVVIVSGDLNAILQ 101
Query: 184 ALELILLKLSED 195
L LIL KL D
Sbjct: 102 VLYLILTKLVAD 113
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 16 GKRSTAPVKSLSSDPT---EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
G+RS +S+S + T I + + L GAV+G+GG TI + Q SG RI++S
Sbjct: 196 GRRSGDHGRSVSGSSRRGGDDETSILVTIPDSLIGAVLGRGGRTIAEVQVASGCRIKVSA 255
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+FF GT +R ++I+G+ + + A L+ KL
Sbjct: 256 RDDFFEGTRNRKVVITGSQEGVQMANYLLTQKL 288
>gi|412993678|emb|CCO14189.1| predicted protein [Bathycoccus prasinos]
Length = 335
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 125/209 (59%), Gaps = 22/209 (10%)
Query: 22 PVKSLSSDPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
P + S+P P + ++ LV + AGAV+GKGG+TIN+ Q+ + RIQL+R+ E FPGT
Sbjct: 12 PTTTTGSNPHSDPAFALKMLVDSRNAGAVLGKGGATINELQTSTNCRIQLTRTGEVFPGT 71
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA---------------------DDVG 119
++R++ +SG + +L AV L+ KL +E + + ++
Sbjct: 72 SERVLTLSGELPSVLTAVHLISTKLQSETNNGNNNNNNENNEENFENTNTNTEGGEENKQ 131
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
K RL++PN++ G ++GK GATIKSF++DS+A I++S + + G +DR++T++GT+
Sbjct: 132 QTPKCRLVIPNAAAGCVLGKGGATIKSFIEDSEAEIRLSSQNQAPPGCHDRILTISGTIG 191
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYTY 208
+ +RA+ L+ L ED Y+ + P TY
Sbjct: 192 QILRAVALVAANLLEDQNYATLVKRPSTY 220
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + G ++GKGG TI + Q SG RI++S ++F PGT R + ISG++ + A ++
Sbjct: 263 VDDSKMGPILGKGGRTITEIQVSSGCRIKVSDRNDFVPGTNLRTLQISGSVTGVQLAWEM 322
Query: 101 VIDKL 105
+ ++L
Sbjct: 323 LEERL 327
>gi|428183593|gb|EKX52450.1| hypothetical protein GUITHDRAFT_101621 [Guillardia theta CCMP2712]
Length = 358
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 128/230 (55%), Gaps = 9/230 (3%)
Query: 13 DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
DV KR S D T+ ++ L+ N AG+VIGK G+TIN + SGA++++S
Sbjct: 16 DVLAKRQVTGDGISSGDETQ--MALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSS 73
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSS 132
+ E FPGT DRI++ISG ++ +L A +VI ++ + ++ DDV + +++P ++
Sbjct: 74 NSETFPGTADRIVLISGKVETVLSAAKMVISEMYRDPNSGRVPDDVNAVMTVSIVIPAAA 133
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLK 191
CG +IGK G I S +++QA I++ D + GLN+R+VT+ GTL + A+E I+
Sbjct: 134 CGLVIGKGGEKINSLREETQAKIQLQAKDKVAIPGLNERIVTIQGTLPQAQTAVEKIVHL 193
Query: 192 LSED-TLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
+ ED + + + Y +G+ G G YG P+ AA YG
Sbjct: 194 IHEDGNIRYENLGTNYGMSGMMGKGL-GQGYGMGMMPM----QGAAAMYG 238
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T+ T ++ +++ G ++GKGG + ++ S SGA I++S+ + PGT +R I I GT
Sbjct: 278 TDMHTVLKLSITDDAVGPLLGKGGCNLKEYISVSGANIKVSQRGDTIPGTNNRYITIQGT 337
Query: 91 IDEILRAVDLVIDK 104
+ A LV+ K
Sbjct: 338 AAAVQYAQLLVLQK 351
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
T L+L + + + G ++GK G +K ++ S A IK+S+ + G N+R +T+ GT
Sbjct: 282 TVLKLSITDDAVGPLLGKGGCNLKEYISVSGANIKVSQRGDTIPGTNNRYITIQGTAAAV 341
Query: 182 MRALELILLK 191
A L+L K
Sbjct: 342 QYAQLLVLQK 351
>gi|312380039|gb|EFR26147.1| hypothetical protein AND_07973 [Anopheles darlingi]
Length = 552
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 117/200 (58%), Gaps = 9/200 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV + AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +ISGT+D IL
Sbjct: 42 HFKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKSHDFYPGTTERVCLISGTVDGIL 101
Query: 96 RAVDLVIDKL-----LTELHAEDQADDVGTKTK-LRLIVPNSSCGSIIGKAGATIKSFMD 149
+D +IDK+ +T+ E A + K ++++VPNS+ G IIGKAGA IK +
Sbjct: 102 TVLDFIIDKIREKPDMTKALTEADAKQAQERDKQVKILVPNSTAGMIIGKAGAYIKQIKE 161
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 162 ESGSYVQISQKPKDLT-LQERCITIIGEKENNKVACKMILAKIVEDPSSGTCLNVSYADI 220
Query: 210 GVFFSGFH--GMPYGAVPPP 227
+ F+ G P+ A P
Sbjct: 221 NGPVANFNPTGSPFAASQTP 240
>gi|170048061|ref|XP_001851517.1| nova [Culex quinquefasciatus]
gi|167870269|gb|EDS33652.1| nova [Culex quinquefasciatus]
Length = 534
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 118/203 (58%), Gaps = 15/203 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV + AGA+IGKGG TI Q +GAR+++S++H+F+PGT++R+ +ISGT+D IL
Sbjct: 28 HFKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKAHDFYPGTSERVCLISGTVDGIL 87
Query: 96 RAVDLVIDKL---------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+D +IDK+ LTE A+ A+ +++++VPNS+ G IIGKAGA IK
Sbjct: 88 TVLDFIIDKIREKPDMTKALTEADAKQAAER---DKQVKVLVPNSTAGMIIGKAGAFIKQ 144
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
+DS + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 145 IKEDSGSYVQISQKPKELT-LQERCITIIGEKENNKIACKMILSKIVEDPSSGSCLNVSY 203
Query: 207 TYAGVFFSGFH--GMPYGAVPPP 227
+ F+ G P+ A P
Sbjct: 204 ADINGPVANFNPTGSPFAASQNP 226
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V ++ +P Y FL GA G ++ + Q SGA IQ+S+ F PGT +
Sbjct: 419 VGAILGNPYLHSAYAPFLQCAFPMGAFDSPAGRSLVEIQHLSGANIQISKKGIFAPGTRN 478
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTE 108
RI+ I+G + I A L+ ++ E
Sbjct: 479 RIVTITGGPNAINVAHYLIEQRIQEE 504
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ ++ LV N AG +IGK G+ I + SG+ +Q+S+ + +R I I G
Sbjct: 117 ERDKQVKVLVPNSTAGMIIGKAGAFIKQIKEDSGSYVQISQKPKELT-LQERCITIIGEK 175
Query: 92 DEILRAVDLVIDKLLTE 108
+ A +++ K++ +
Sbjct: 176 ENNKIACKMILSKIVED 192
>gi|307181420|gb|EFN69015.1| RNA-binding protein Nova-1 [Camponotus floridanus]
Length = 514
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 112/179 (62%), Gaps = 9/179 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+GT+D I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTVDAIM 105
Query: 96 RAVDLVIDKLLT--ELHAEDQAD-DVGTKT-----KLRLIVPNSSCGSIIGKAGATIKSF 147
++ ++DK+ +L ++ D D G T +++++VPNS+ G IIGKAG IK
Sbjct: 106 EVMEFIMDKIREKPDLTSKTTVDFDSGKATAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++S + ++IS+ L +R +T+ G + RAL +IL K+++D + V Y
Sbjct: 166 KEESGSYVQISQKAKD-LSLQERCITVIGEKENNHRALHMILAKVADDPQSGTCLNVSY 223
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 29 DPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
D K T + ++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I
Sbjct: 419 DANNKETKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTI 478
Query: 88 SGTIDEILRAVDLVIDKLLTELHAE 112
+G + I A +I++ ++E A+
Sbjct: 479 TGYPNAINTA-QYLIEQRISEEEAK 502
>gi|322780737|gb|EFZ09994.1| hypothetical protein SINV_05815 [Solenopsis invicta]
Length = 483
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 112/179 (62%), Gaps = 9/179 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+GT+D I+
Sbjct: 15 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTVDAIM 74
Query: 96 RAVDLVIDKLLT--ELHAEDQAD-DVGTKT-----KLRLIVPNSSCGSIIGKAGATIKSF 147
++ ++DK+ +L ++ D D G T +++++VPNS+ G IIGKAG IK
Sbjct: 75 EVMEFIMDKIREKPDLTSKTTVDFDSGKATAERDKQVKILVPNSTAGMIIGKAGNYIKQI 134
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++S + ++IS+ L +R +T+ G + RAL +IL K+++D + V Y
Sbjct: 135 KEESGSYVQISQKAKD-LSLQERCITVIGEKENNHRALHMILAKVADDPQSGTCLNVSY 192
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G + I A
Sbjct: 401 IAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTITGYPNAINTA-QY 459
Query: 101 VIDKLLTELHAE 112
+I++ ++E A+
Sbjct: 460 LIEQRISEEEAK 471
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ ++ LV N AG +IGK G+ I + +SG+ +Q+S+ + +R I + G
Sbjct: 106 ERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLS-LQERCITVIGEK 164
Query: 92 DEILRAVDLVIDKL 105
+ RA+ +++ K+
Sbjct: 165 ENNHRALHMILAKV 178
>gi|332026626|gb|EGI66735.1| RNA-binding protein Nova-1 [Acromyrmex echinatior]
Length = 514
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 112/179 (62%), Gaps = 9/179 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+GT+D I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTVDAIM 105
Query: 96 RAVDLVIDKLLT--ELHAEDQAD-DVGTKT-----KLRLIVPNSSCGSIIGKAGATIKSF 147
++ ++DK+ +L ++ D D G T +++++VPNS+ G IIGKAG IK
Sbjct: 106 EVMEFIMDKIREKPDLTSKTTVDFDSGKATAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++S + ++IS+ L +R +T+ G + RAL +IL K+++D + V Y
Sbjct: 166 KEESGSYVQISQKAKD-LSLQERCITVIGEKENNHRALHMILAKVADDPQSGTCLNVSY 223
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 29 DPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
D K T + ++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I
Sbjct: 419 DANNKETKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTI 478
Query: 88 SGTIDEILRAVDLVIDKLLTE 108
+G + I A L+ ++ E
Sbjct: 479 TGYPNAINTAQYLIEQRISEE 499
>gi|347968782|ref|XP_312014.5| AGAP002896-PA [Anopheles gambiae str. PEST]
gi|333467844|gb|EAA08028.5| AGAP002896-PA [Anopheles gambiae str. PEST]
Length = 537
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 116/200 (58%), Gaps = 9/200 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV + AGA+IGKGG TI Q +GAR+++S++H+F+PGTT+RI +ISGT++ IL
Sbjct: 25 HFKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKAHDFYPGTTERICLISGTVEGIL 84
Query: 96 RAVDLVIDKL-----LTELHAEDQADDVGTKTK-LRLIVPNSSCGSIIGKAGATIKSFMD 149
+D + DK+ +T+ E A + K ++++VPN++ G IIGKAGA IK +
Sbjct: 85 AVLDFITDKIREKPDITKALTEADAKQAQERDKQVKILVPNTTAGMIIGKAGAYIKQIKE 144
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 145 ESGSYVQISQKPKDLT-LQERCITIIGEKENNRIACKMILAKIVEDPSSGTCLNVSYADI 203
Query: 210 GVFFSGFH--GMPYGAVPPP 227
+ F+ G P+ A P
Sbjct: 204 NGPVANFNPTGSPFAASQNP 223
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 25 SLSSDPT--EKPTYIRFLVSNP--LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
SLS PT E T V P + GA++G G ++ + Q SGA IQ+S+ F PGT
Sbjct: 422 SLSKSPTPAEMTTSKEKNVEIPEVIVGAILGPAGRSLVEIQHISGANIQISKKGIFAPGT 481
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTE 108
+RI+ I+G + I A L+ +++ E
Sbjct: 482 RNRIVTITGQQNAINVAQYLIEERISQE 509
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ ++ LV N AG +IGK G+ I + +SG+ +Q+S+ + +R I I G
Sbjct: 114 ERDKQVKILVPNTTAGMIIGKAGAYIKQIKEESGSYVQISQKPKDLT-LQERCITIIGEK 172
Query: 92 DEILRAVDLVIDKLLTE 108
+ A +++ K++ +
Sbjct: 173 ENNRIACKMILAKIVED 189
>gi|390177068|ref|XP_003736271.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388858895|gb|EIM52344.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 548
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 25/256 (9%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPT------------YIRFLVSNPLAGAVIGKGGSTI 57
PSP++ R + L SDP + T +++ LV +GA+IGKGG TI
Sbjct: 11 PSPEIGDSRK----RPLDSDPENEQTKRSHFSSGETTYHMKILVPAVASGAIIGKGGETI 66
Query: 58 NDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADD 117
Q +GAR+++S+SH+F+PGTT+R+ +I+G+ + I+ +D ++DK+ + + D
Sbjct: 67 ASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKIREKPDLTTKIID 126
Query: 118 VGTK------TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRL 171
+K +++++VPNS+ G IIGK GA IK +DS + ++IS+ L +R
Sbjct: 127 AESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVS-LQERC 185
Query: 172 VTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH--GMPYGAVPPPVP 229
+T+ G + A ++IL K+ ED + V Y + F+ G PY +
Sbjct: 186 ITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADVSGPVANFNPTGSPYATNQNAIN 245
Query: 230 AVPHNTAAHYGPNMGG 245
+ + + G ++GG
Sbjct: 246 SSTASLNSTLGTSIGG 261
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G + I +A L+ K+
Sbjct: 472 GAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQKIT 531
Query: 107 TE 108
E
Sbjct: 532 EE 533
>gi|391326103|ref|XP_003737564.1| PREDICTED: RNA-binding protein Nova-1-like [Metaseiulus
occidentalis]
Length = 430
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 115/198 (58%), Gaps = 11/198 (5%)
Query: 34 PTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
PTY + LV AGA+IGKGG TI Q GAR+++S+S++F+PGTT+R+ +I+GT++
Sbjct: 23 PTYHFKILVPAVAAGAIIGKGGETIAQVQKDCGARVKMSKSNDFYPGTTERVCLITGTVE 82
Query: 93 EILRAVDLVIDKLLTELHAE-------DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
I++ + ++DK+ + D + +++++VPNS+ G IIGK G+ IK
Sbjct: 83 GIVKIHNFIMDKIKEKPDPNSRTGVDFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIK 142
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+DS I++S+ + L +R +T+ G L+ +A++L+L K+ ED + V
Sbjct: 143 QIKEDSNVYIQLSQKSRD-HALAERSITIIGELEPTRKAVDLVLAKIVEDPQSGSCLNVS 201
Query: 206 YTYAGVFFSGFH--GMPY 221
Y A + F+ G PY
Sbjct: 202 YADAQGPVANFNPTGSPY 219
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL---SRSHEFFPGTTDRII 85
P E+ ++ LV N AG +IGKGGS I + S IQL SR H +R I
Sbjct: 113 QPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEDSNVYIQLSQKSRDHAL----AERSI 168
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I G ++ +AVDLV+ K++ +
Sbjct: 169 TIIGELEPTRKAVDLVLAKIVED 191
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 17 KRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
+ S AP L S E V + GA++G GG + + Q SGA IQ+S+ F
Sbjct: 326 RNSPAPGGELGSKNVEA-IQKDVEVGENIVGAILGPGGKHLVEIQRFSGASIQISKKGIF 384
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD 116
PGT +RI+ I+G + + A L+ + E Q +
Sbjct: 385 APGTRNRIVSITGCPNAVATAHYLIQQHVAEEEAKRSQQN 424
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 121/214 (56%), Gaps = 12/214 (5%)
Query: 17 KRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
+R T +K SS ++ L+ N AG++IGKGG IND Q+ S RI+LS +++
Sbjct: 7 RRHTEIIKDNSSG---DKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDT 63
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD----DVGTKTKLRLIVPNSS 132
FPGT +R+I+I+G+I + + +++K+ E A+ D +L++IVPN++
Sbjct: 64 FPGTKERVIVITGSIAGVRQVNRFILEKVSEEGKADKAIQYGVLDKNRNRQLKMIVPNAA 123
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
G IIGK G+ IK D S A +++S+ + Y +++R++T+TG +E++ A ELI+ K
Sbjct: 124 AGVIIGKGGSNIKEIQDKSGAHVQVSQ-KKAQYAIDERILTVTGEFNERLTAWELIIWKC 182
Query: 193 SEDTLYSQTMTVPYTY---AGVFFSGFHGMPYGA 223
ED +V Y++ AG H YG
Sbjct: 183 LEDINNLPNTSVSYSHVEPAGT-LPALHSNYYGG 215
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 15 HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSH 74
+G +S P + + T I+ V + + GA++GK G I+D Q+ SGA IQ+S+
Sbjct: 253 YGMQSYPPTARNNRPSSYGETVIKIPVPDSIIGAILGKRGKVISDIQNISGAHIQVSQRG 312
Query: 75 EFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAE 112
++ PGT DR + ++GT D A L+ L E +
Sbjct: 313 DYIPGTKDREVTVTGTNDAAHYADKLIKGYLDKEYKKQ 350
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+T +++ VP+S G+I+GK G I + S A I++S+ G DR VT+TGT D
Sbjct: 272 ETVIKIPVPDSIIGAILGKRGKVISDIQNISGAHIQVSQRGDYIPGTKDREVTVTGTNDA 331
Query: 181 QMRALELI 188
A +LI
Sbjct: 332 AHYADKLI 339
>gi|270009705|gb|EFA06153.1| hypothetical protein TcasGA2_TC008998 [Tribolium castaneum]
Length = 564
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 110/177 (62%), Gaps = 7/177 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV + AGA+IGKGG TI Q ++GAR+++S+SH+F+PGTT+R+ +I+G++D I+
Sbjct: 46 HFKVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAIM 105
Query: 96 RAVDLVIDKL-----LTELHAEDQADDVGTKTK-LRLIVPNSSCGSIIGKAGATIKSFMD 149
D + DK+ LT+ E ++ + + K ++++VPNS+ G IIGKAG IK +
Sbjct: 106 VVADFIADKIREKPDLTKPLVETESKLMQDRDKQVKILVPNSTAGMIIGKAGNYIKQIKE 165
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
S + ++IS+ L +R +T+ G ++ +A ++IL K+ ED + V Y
Sbjct: 166 TSGSYVQISQKAKDVS-LQERCITVIGEKEQNRQACQMILAKIVEDPQSGTCLNVSY 221
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 49 VIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
V G GG ++ + Q SGA IQ+S+ F PGT +RI+ I+G+ I A L+ ++ E
Sbjct: 489 VAGPGGRSLVEIQQLSGANIQISKKGIFAPGTRNRIVTITGSPQSINTAQYLIEQRISEE 548
Query: 109 LHAEDQADDVGTKT 122
+ + +GT T
Sbjct: 549 ELKRARNNGLGTLT 562
>gi|189239335|ref|XP_973573.2| PREDICTED: similar to pasilla CG16765-PK [Tribolium castaneum]
Length = 535
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 110/177 (62%), Gaps = 7/177 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV + AGA+IGKGG TI Q ++GAR+++S+SH+F+PGTT+R+ +I+G++D I+
Sbjct: 46 HFKVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAIM 105
Query: 96 RAVDLVIDKL-----LTELHAEDQADDVGTKTK-LRLIVPNSSCGSIIGKAGATIKSFMD 149
D + DK+ LT+ E ++ + + K ++++VPNS+ G IIGKAG IK +
Sbjct: 106 VVADFIADKIREKPDLTKPLVETESKLMQDRDKQVKILVPNSTAGMIIGKAGNYIKQIKE 165
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
S + ++IS+ L +R +T+ G ++ +A ++IL K+ ED + V Y
Sbjct: 166 TSGSYVQISQKAKDVS-LQERCITVIGEKEQNRQACQMILAKIVEDPQSGTCLNVSY 221
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG ++ + Q SGA IQ+S+ F PGT +RI+ I+G+ I A L
Sbjct: 452 IAEVIVGAILGPGGRSLVEIQQLSGANIQISKKGIFAPGTRNRIVTITGSPQSINTAQYL 511
Query: 101 VIDKLLTELHAEDQADDVGTKT 122
+ ++ E + + +GT T
Sbjct: 512 IEQRISEEELKRARNNGLGTLT 533
>gi|427792957|gb|JAA61930.1| Putative pasilla, partial [Rhipicephalus pulchellus]
Length = 538
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 116/197 (58%), Gaps = 14/197 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV AGA+IGKGG TI Q ++GAR+++S+S++F+PGTT+R+ +I+G+++ +L
Sbjct: 39 HFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVL 98
Query: 96 RAVDLVIDKLLTELHAE-------DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
R + +++K+ + D + +++++VPNS+ G IIGK G+ IK
Sbjct: 99 RIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIKQIK 158
Query: 149 DDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++S A ++IS+ DH+ L +R +T+ G +D +A +LIL K+ ED + V Y
Sbjct: 159 EESGAYVQISQKSKDHA---LAERCITVIGEMDNNKKACQLILAKIVEDPQSGSCLHVSY 215
Query: 207 TYAGVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 216 AEVTGPVANFNPTGSPY 232
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + GA++G GG ++ + Q SGA IQ+S+ F PGT +RI+ I+GT + + A L
Sbjct: 457 VGENIVGAILGPGGKSLVEIQRFSGAAIQISKKGTFAPGTRNRIVSITGTPNAVSTAQYL 516
Query: 101 VIDKLLTELHAEDQADDVG 119
+ ++ E Q + +G
Sbjct: 517 IEQQIAEEEAKRSQQNALG 535
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
P E+ ++ LV N AG +IGKGGS I + +SGA +Q+S+ + +R I +
Sbjct: 126 QPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDH-ALAERCITVI 184
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G +D +A L++ K++ +
Sbjct: 185 GEMDNNKKACQLILAKIVED 204
>gi|195388678|ref|XP_002053006.1| GJ23641 [Drosophila virilis]
gi|194151092|gb|EDW66526.1| GJ23641 [Drosophila virilis]
Length = 574
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 113/194 (58%), Gaps = 9/194 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 67 HMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIM 126
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIKSFMD 149
VD ++DK+ + + D +K +++++VPNS+ G IIGK GA IK +
Sbjct: 127 TVVDFIMDKIREKPDLTTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKE 186
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 187 ESGSYVQISQKPKDVS-LQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADV 245
Query: 210 GVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 246 NGPVANFNPTGSPY 259
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GAV+G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K+
Sbjct: 498 GAVLGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKIN 557
Query: 107 TE 108
E
Sbjct: 558 EE 559
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 143 TTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVS 202
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+R I I G + A +++ K++ +
Sbjct: 203 -LQERCITIIGDKENNKNACKMILSKIVED 231
>gi|195037250|ref|XP_001990077.1| GH18435 [Drosophila grimshawi]
gi|193894273|gb|EDV93139.1| GH18435 [Drosophila grimshawi]
Length = 569
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 113/194 (58%), Gaps = 9/194 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 67 HMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIM 126
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIKSFMD 149
VD ++DK+ + + D +K +++++VPNS+ G IIGK GA IK +
Sbjct: 127 TVVDFIMDKIREKPDLTTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKE 186
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 187 ESGSYVQISQKPKDVS-LQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADV 245
Query: 210 GVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 246 NGPVANFNPTGSPY 259
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GAV+G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G + I +A L+ K+
Sbjct: 499 GAVLGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQKIN 558
Query: 107 TE 108
E
Sbjct: 559 EE 560
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 143 TTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVS 202
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+R I I G + A +++ K++ +
Sbjct: 203 -LQERCITIIGDKENNKNACKMILSKIVED 231
>gi|195107855|ref|XP_001998509.1| GI24011 [Drosophila mojavensis]
gi|193915103|gb|EDW13970.1| GI24011 [Drosophila mojavensis]
Length = 574
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 113/194 (58%), Gaps = 9/194 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 67 HMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIM 126
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIKSFMD 149
VD ++DK+ + + D +K +++++VPNS+ G IIGK GA IK +
Sbjct: 127 TVVDFIMDKIREKPDLTTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKE 186
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 187 ESGSYVQISQKPKDVS-LQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADV 245
Query: 210 GVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 246 NGPVANFNPTGSPY 259
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GAV+G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K+
Sbjct: 498 GAVLGPNGRSLVEIQHASGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKIN 557
Query: 107 TE 108
E
Sbjct: 558 EE 559
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 143 TTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVS 202
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+R I I G + A +++ K++ +
Sbjct: 203 -LQERCITIIGDKENNKNACKMILSKIVED 231
>gi|161078122|ref|NP_001036695.1| pasilla, isoform K [Drosophila melanogaster]
gi|320542560|ref|NP_001189201.1| pasilla, isoform P [Drosophila melanogaster]
gi|320542562|ref|NP_001189202.1| pasilla, isoform M [Drosophila melanogaster]
gi|113194763|gb|ABI31152.1| pasilla, isoform K [Drosophila melanogaster]
gi|318068745|gb|ADV37292.1| pasilla, isoform P [Drosophila melanogaster]
gi|318068746|gb|ADV37293.1| pasilla, isoform M [Drosophila melanogaster]
Length = 550
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 134/256 (52%), Gaps = 25/256 (9%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPT------------YIRFLVSNPLAGAVIGKGGSTI 57
PSP+ R + L SDP + T +++ LV +GA+IGKGG TI
Sbjct: 11 PSPETGDSRK----RPLDSDPENEQTKRSHFSSGETTYHMKILVPAVASGAIIGKGGETI 66
Query: 58 NDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADD 117
Q +GAR+++S+SH+F+PGTT+R+ +I+G+ + I+ ++ ++DK+ + ++ D
Sbjct: 67 ASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKIREKPDLTNKIVD 126
Query: 118 VGTK------TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRL 171
+K +++++VPNS+ G IIGK GA IK ++S + ++IS+ + L +R
Sbjct: 127 TDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ-KPTDVSLQERC 185
Query: 172 VTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH--GMPYGAVPPPVP 229
+T+ G + A ++IL K+ ED + V Y + F+ G PY +
Sbjct: 186 ITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADVSGPVANFNPTGSPYATNQNAIN 245
Query: 230 AVPHNTAAHYGPNMGG 245
+ + + G +GG
Sbjct: 246 SSTASLNSTLGTTIGG 261
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K+
Sbjct: 474 GAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKIN 533
Query: 107 TE 108
E
Sbjct: 534 EE 535
>gi|390177070|ref|XP_003736272.1| GA30025, isoform F [Drosophila pseudoobscura pseudoobscura]
gi|388858896|gb|EIM52345.1| GA30025, isoform F [Drosophila pseudoobscura pseudoobscura]
Length = 800
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 122/222 (54%), Gaps = 9/222 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 261 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 320
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ +D ++DK+ + + D +K +++++VPNS+ G IIGK GA IK
Sbjct: 321 EAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 380
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+DS + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 381 QIKEDSGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 439
Query: 206 YTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
Y + F+ G PY + + + + G ++GG
Sbjct: 440 YADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTSIGG 481
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G + I +A L+ K+
Sbjct: 724 GAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQKIT 783
Query: 107 TE 108
E
Sbjct: 784 EE 785
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + SG+ +Q+S+ +
Sbjct: 341 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDV- 399
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+R I I G + A +++ K++ +
Sbjct: 400 SLQERCITIIGDKENNKNACKMILSKIVED 429
>gi|390177062|ref|XP_003736268.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858892|gb|EIM52341.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 714
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 113/198 (57%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 239 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 298
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ +D ++DK+ + + D +K +++++VPNS+ G IIGK GA IK
Sbjct: 299 EAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 358
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+DS + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 359 QIKEDSGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 417
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 418 YADVSGPVANFNPTGSPY 435
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + SG+ +Q+S+ +
Sbjct: 319 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDV- 377
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+R I I G + A +++ K++ +
Sbjct: 378 SLQERCITIIGDKENNKNACKMILSKIVED 407
>gi|390177066|ref|XP_003736270.1| GA30025, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388858894|gb|EIM52343.1| GA30025, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 576
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 122/222 (54%), Gaps = 9/222 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 69 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 128
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ +D ++DK+ + + D +K +++++VPNS+ G IIGK GA IK
Sbjct: 129 EAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 188
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+DS + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 189 QIKEDSGSYVQISQKPKDVS-LQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 247
Query: 206 YTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
Y + F+ G PY + + + + G ++GG
Sbjct: 248 YADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTSIGG 289
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G + I +A L+ K+
Sbjct: 500 GAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQKIT 559
Query: 107 TE 108
E
Sbjct: 560 EE 561
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + SG+ +Q+S+ +
Sbjct: 149 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVS 208
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+R I I G + A +++ K++ +
Sbjct: 209 -LQERCITIIGDKENNKNACKMILSKIVED 237
>gi|195158519|ref|XP_002020133.1| GL13824 [Drosophila persimilis]
gi|194116902|gb|EDW38945.1| GL13824 [Drosophila persimilis]
Length = 554
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 122/222 (54%), Gaps = 9/222 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 69 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 128
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ +D ++DK+ + + D +K +++++VPNS+ G IIGK GA IK
Sbjct: 129 EAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 188
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+DS + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 189 QIKEDSGSYVQISQKPKDVS-LQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 247
Query: 206 YTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
Y + F+ G PY + + + + G ++GG
Sbjct: 248 YADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTSIGG 289
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 51 GKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G + I +A L+ K+ E
Sbjct: 482 GPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQKITEE 539
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + SG+ +Q+S+ +
Sbjct: 149 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVS 208
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+R I I G + A +++ K++ +
Sbjct: 209 -LQERCITIIGDKENNKNACKMILSKIVED 237
>gi|125773159|ref|XP_001357838.1| GA30025, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|54637571|gb|EAL26973.1| GA30025, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 570
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 122/222 (54%), Gaps = 9/222 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ +D ++DK+ + + D +K +++++VPNS+ G IIGK GA IK
Sbjct: 123 EAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 182
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+DS + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 183 QIKEDSGSYVQISQKPKDVS-LQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 241
Query: 206 YTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
Y + F+ G PY + + + + G ++GG
Sbjct: 242 YADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTSIGG 283
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G + I +A L+ K+
Sbjct: 494 GAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQKIT 553
Query: 107 TE 108
E
Sbjct: 554 EE 555
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + SG+ +Q+S+ +
Sbjct: 143 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVS 202
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+R I I G + A +++ K++ +
Sbjct: 203 -LQERCITIIGDKENNKNACKMILSKIVED 231
>gi|390177064|ref|XP_003736269.1| GA30025, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388858893|gb|EIM52342.1| GA30025, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 554
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 122/222 (54%), Gaps = 9/222 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 47 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 106
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ +D ++DK+ + + D +K +++++VPNS+ G IIGK GA IK
Sbjct: 107 EAIMVVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 166
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+DS + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 167 QIKEDSGSYVQISQKPKDVS-LQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 225
Query: 206 YTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
Y + F+ G PY + + + + G ++GG
Sbjct: 226 YADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTSIGG 267
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G + I +A L+ K+
Sbjct: 478 GAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIAKAQFLIEQKIT 537
Query: 107 TE 108
E
Sbjct: 538 EE 539
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + SG+ +Q+S+ +
Sbjct: 127 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDV- 185
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+R I I G + A +++ K++ +
Sbjct: 186 SLQERCITIIGDKENNKNACKMILSKIVED 215
>gi|427792951|gb|JAA61927.1| Putative rna-binding protein nova1/pasilla, partial [Rhipicephalus
pulchellus]
Length = 448
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 122/210 (58%), Gaps = 15/210 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV AGA+IGKGG TI Q ++GAR+++S+S++F+PGTT+R+ +I+G+++ +L
Sbjct: 39 HFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVL 98
Query: 96 RAVDLVIDKLLTELHAE-------DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
R + +++K+ + D + +++++VPNS+ G IIGK G+ IK
Sbjct: 99 RIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIKQIK 158
Query: 149 DDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++S A ++IS+ DH+ L +R +T+ G +D +A +LIL K+ ED + V Y
Sbjct: 159 EESGAYVQISQKSKDHA---LAERCITVIGEMDNNKKACQLILAKIVEDPQSGSCLHVSY 215
Query: 207 TYAGVFFSGFH--GMPYGAVPPPVPAVPHN 234
+ F+ G PY A P V + +N
Sbjct: 216 AEVTGPVANFNPTGSPY-ANPSSVHSTVNN 244
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
P E+ ++ LV N AG +IGKGGS I + +SGA +Q+S+ + +R I +
Sbjct: 126 QPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHA-LAERCITVI 184
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G +D +A L++ K++ +
Sbjct: 185 GEMDNNKKACQLILAKIVED 204
>gi|428180127|gb|EKX48995.1| hypothetical protein GUITHDRAFT_68316, partial [Guillardia theta
CCMP2712]
Length = 276
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ LVSN AG VIGK GSTI QS++G +I++S +++FFPGT DR+++I+GT + ++
Sbjct: 1 VQLLVSNKDAGTVIGKSGSTIQSVQSRTGCKIRISNNNDFFPGTQDRVLLITGTTEAVMM 60
Query: 97 AVDLVIDKLLTELH-AEDQADDVGTK-TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+I +LL H E+ D TK + ++VP + G IIGK G IK +++S A
Sbjct: 61 GAKAIITELLENNHTGEENPVDPATKDVVITMLVPEKTSGVIIGKGGENIKHMIEESGAK 120
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+K++ D GL++R++T G L RA+E+++ K+ E+
Sbjct: 121 MKLNSKDTKIPGLDERVLTCDGKLANAKRAMEMVMEKVLEE 161
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP K I LV +G +IGKGG I +SGA+++L+ PG +R++
Sbjct: 82 DPATKDVVITMLVPEKTSGVIIGKGGENIKHMIEESGAKMKLNSKDTKIPGLDERVLTCD 141
Query: 89 GTIDEILRAVDLVIDKLLTELHAE---------------------------DQADDVGTK 121
G + RA+++V++K+L E A + ++
Sbjct: 142 GKLANAKRAMEMVMEKVLEEGAAGYTNISTQYSRVSGMGGMGGMGGMGGGIPRTSNISNP 201
Query: 122 TKLRLI-VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
T + VP+ +++GK G+ I+ M+ S A I++S+ G N R++T+TG
Sbjct: 202 TVTYTVHVPDEVVPALLGKGGSVIREMMEASGAQIRVSQKGEFVPGTNHRIITITGNQHS 261
Query: 181 QMRALELILLKL 192
A +LI K+
Sbjct: 262 ASYAHQLISSKI 273
>gi|345495410|ref|XP_001602171.2| PREDICTED: hypothetical protein LOC100118119 [Nasonia vitripennis]
Length = 533
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 121/214 (56%), Gaps = 18/214 (8%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPTY---------IRFLVSNPLAGAVIGKGGSTINDF 60
PSP++ R + + T++ Y ++ LV AGA+IGKGG TI
Sbjct: 11 PSPEIADSRKRPLDCDVENGATKRSHYGTGGDGTYHLKVLVPGVAAGAIIGKGGETIAQL 70
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLT--ELHAEDQAD-D 117
Q +GAR+++S+SH+F+PGTT+R+ +I+G++D I+ +D +++K+ +L + D D
Sbjct: 71 QKDTGARVKMSKSHDFYPGTTERVCLITGSVDAIMAVMDFIMEKIREKPDLTTKTTVDFD 130
Query: 118 VGTKT-----KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
G T +++++VPNS+ G IIGKAG IK ++S + ++IS+ L +R +
Sbjct: 131 SGKATAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVS-LQERCI 189
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
T+ G + AL +IL K+++D + V Y
Sbjct: 190 TVIGEKENNRNALLMILAKVADDPQSGTCLNVSY 223
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G D I R
Sbjct: 451 IAEVIVGAILGPGGRNLIEIQHLSGANIQISKKGIFAPGTRNRIVTITGFPDAI-RTAHY 509
Query: 101 VIDKLLTELHAE 112
+I+ ++E A+
Sbjct: 510 LIEHRISEEEAK 521
>gi|195499424|ref|XP_002096942.1| GE25952 [Drosophila yakuba]
gi|194183043|gb|EDW96654.1| GE25952 [Drosophila yakuba]
Length = 572
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 123/222 (55%), Gaps = 9/222 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ DV +K +++++VPNS+ G IIGK GA IK
Sbjct: 123 EAIMVVLEFIMDKIREKPDLTNKIVDVESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 182
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 183 QIKEESGSYVQISQKPKDVS-LQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 241
Query: 206 YTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
Y + F+ G PY + + + + G +GG
Sbjct: 242 YADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGG 283
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K+
Sbjct: 496 GAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKIN 555
Query: 107 TE 108
E
Sbjct: 556 EE 557
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ + +R I
Sbjct: 151 SKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVS-LQERCIT 209
Query: 87 ISGTIDEILRAVDLVIDKLLTE 108
I G + A +++ K++ +
Sbjct: 210 IIGDKENNKNACKMILSKIVED 231
>gi|242002844|ref|XP_002436065.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
gi|215499401|gb|EEC08895.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
Length = 474
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 122/220 (55%), Gaps = 22/220 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV AGA+IGKGG TI Q ++GAR+++S+S++F+PGTT+R+ +I+G+++ +L
Sbjct: 51 HFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVL 110
Query: 96 RAVDLVIDKLLTELHAE-------DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
R + +++K+ + D + +++++VPNS+ G IIGK G+ IK
Sbjct: 111 RIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIKQIK 170
Query: 149 DDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++S A ++IS+ DH+ L +R +T+ G L+ +A +IL K+ ED + V Y
Sbjct: 171 EESGAYVQISQKSKDHA---LAERCITVIGELENNKKACHMILAKIVEDPQSGSCLHVSY 227
Query: 207 TYAGVFFSGFH--GMPYG--------AVPPPVPAVPHNTA 236
+ F+ G PY + P PAV N A
Sbjct: 228 AEVTGPVANFNPTGSPYANPSSSLVPSFPGVAPAVAGNVA 267
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + GA++G GG ++ + Q SGA IQ+S+ F PGT +RI+ I+G+ + + A L
Sbjct: 393 VGENIVGAILGPGGKSLVEIQRFSGAAIQISKKGIFAPGTRNRIVTITGSPNAVSTAQYL 452
Query: 101 VIDKLLTELHAEDQADDVG 119
+ ++ E Q + +G
Sbjct: 453 IEQQIAEEEAKRSQQNALG 471
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
P E+ ++ LV N AG +IGKGGS I + +SGA +Q+S+ + +R I +
Sbjct: 138 QPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDH-ALAERCITVI 196
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G ++ +A +++ K++ +
Sbjct: 197 GELENNKKACHMILAKIVED 216
>gi|189528952|ref|XP_001923490.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Danio rerio]
Length = 496
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 12 PDVHGKRSTAPVKSLSSDPT----EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR 67
PD + P ++ S+ T E +++ L+ + AG++IGKGG TI Q ++GA
Sbjct: 30 PDSRKRPLETPTEASSTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGAT 89
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG-------- 119
I+LS+S +F+PGTT+R+ +I GT++ + D + +K+ + + + V
Sbjct: 90 IKLSKSKDFYPGTTERVCLIQGTVEALNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTV 149
Query: 120 ---TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
+ +LIVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G
Sbjct: 150 NPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG-INLQERVVTISG 208
Query: 177 TLDEQMRALELILLKLSEDTLYSQTMTVPYT 207
++ +A+E+I+ K+ ED S + + Y+
Sbjct: 209 EPEQNRKAVEIIVQKIQEDPQSSSCLNISYS 239
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 413 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSPAATQA 472
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 473 AQYLISQRITYE 484
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 80 TTDRIIMISGTIDEILRAVD-LVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
T + +G + L A LV LL + A DV + + VP + G+I+G
Sbjct: 373 TLGSLAAATGATNGYLSAASPLVASSLLATEKLAEGAKDV-----VEIAVPENLVGAILG 427
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
K G T+ + + + A I+IS+ G +R VT+TG+ A LI +++
Sbjct: 428 KGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSPAATQAAQYLISQRIT 482
>gi|195330414|ref|XP_002031899.1| GM23807 [Drosophila sechellia]
gi|194120842|gb|EDW42885.1| GM23807 [Drosophila sechellia]
Length = 572
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 114/194 (58%), Gaps = 9/194 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+ + I+
Sbjct: 67 HMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIM 126
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSIIGKAGATIKSFMD 149
++ ++DK+ + ++ DV +K +++++VPNS+ G IIGK GA IK +
Sbjct: 127 VVMEFIMDKIREKPDLTNKIVDVESKQTQERDRQVKILVPNSTAGMIIGKGGAFIKQIKE 186
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 187 ESGSYVQISQKPKDVS-LQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADV 245
Query: 210 GVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 246 SGPVANFNPTGSPY 259
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K+
Sbjct: 496 GAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKIN 555
Query: 107 TE 108
E
Sbjct: 556 EE 557
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ + +R I
Sbjct: 151 SKQTQERDRQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDV-SLQERCIT 209
Query: 87 ISGTIDEILRAVDLVIDKLLTE 108
I G + A +++ K++ +
Sbjct: 210 IIGDKENNKNACKMILSKIVED 231
>gi|302842622|ref|XP_002952854.1| hypothetical protein VOLCADRAFT_121094 [Volvox carteri f.
nagariensis]
gi|300261894|gb|EFJ46104.1| hypothetical protein VOLCADRAFT_121094 [Volvox carteri f.
nagariensis]
Length = 336
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 113/206 (54%), Gaps = 18/206 (8%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ LVSN +AG+VIGK G+ I Q SGAR+QLSR+ EF+PGT+DR++++SG++ +L A
Sbjct: 45 KLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGEFYPGTSDRVLLLSGSLHAVLTA 104
Query: 98 VDLVIDKLLTELHAEDQADDV--GTK-------TKLRLIVPNSSCGSIIGKAGATIKSFM 148
+ L+++K+ + +A ++ V G K +++L + CG +IG G T++ F+
Sbjct: 105 IFLILEKISRDANASASSNGVKRGAKKPEEAGQAQVKLALSRRLCGLLIGHKGQTVRDFI 164
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY 208
DS + I++ L +R +T++G D+ +RA+ LIL LS Y+ M
Sbjct: 165 GDSGSTIRVQSLSELTPSDPERTITVSGARDQVLRAVALILNTLSMHEGYASYMETTLQL 224
Query: 209 AGVFFSGFHGMPYGAVPPPVPAVPHN 234
A G V PP A N
Sbjct: 225 A---------TNQGVVLPPRAASSKN 241
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEK-PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
S D + S+ VK + P E ++ +S L G +IG G T+ DF SG+ I+
Sbjct: 113 SRDANASASSNGVKRGAKKPEEAGQAQVKLALSRRLCGLLIGHKGQTVRDFIGDSGSTIR 172
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL-LTELHAE------DQADDVG--- 119
+ E P +R I +SG D++LRAV L+++ L + E +A A + G
Sbjct: 173 VQSLSELTPSDPERTITVSGARDQVLRAVALILNTLSMHEGYASYMETTLQLATNQGVVL 232
Query: 120 -------------TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
+T+L L + + G+I+GK G + S+ IKIS
Sbjct: 233 PPRAASSKNVLSNVRTQLTLYLSDDDVGAILGKKGQNLIEVQQSSRVTIKISDRSKMDPT 292
Query: 167 LNDRLVTLTGTLDEQMRALELILLKLS 193
N+R VT++G A +I KLS
Sbjct: 293 TNEREVTISGNYSAVKLAEAMIAEKLS 319
>gi|348537887|ref|XP_003456424.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oreochromis
niloticus]
Length = 496
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 12 PDVHGKRSTAPVKSLSSDPT----EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR 67
PD + P ++ S+ T E +++ L+ + AG++IGKGG TI Q ++GA
Sbjct: 30 PDSRKRPLETPTEASSTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGAT 89
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG-------- 119
I+LS+S +F+PGTT+R+ +I GT++ + D + +K+ + + + V
Sbjct: 90 IKLSKSKDFYPGTTERVCLIQGTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTV 149
Query: 120 ---TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
+ +LIVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G
Sbjct: 150 NPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEG-INLQERVVTISG 208
Query: 177 TLDEQMRALELILLKLSEDTLYSQTMTVPYT 207
++ +A+E+I+ K+ ED S + + Y+
Sbjct: 209 EPEQNRKAVEIIVQKIQEDPQSSSCLNISYS 239
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+ +
Sbjct: 413 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGS-QAATQ 471
Query: 97 AVDLVIDKLLT 107
A +I + +T
Sbjct: 472 AAQYLISQRIT 482
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A LV LL TE AE G K + + VP + G+I+GK G T+ + + + A I
Sbjct: 391 ASPLVASSLLATEKLAE------GAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARI 444
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
+IS+ G +R VT+TG+ A LI +++
Sbjct: 445 QISKKGEFIPGTRNRKVTITGSQAATQAAQYLISQRIT 482
>gi|442618212|ref|NP_001262414.1| pasilla, isoform Q [Drosophila melanogaster]
gi|440217246|gb|AGB95796.1| pasilla, isoform Q [Drosophila melanogaster]
Length = 517
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 124/223 (55%), Gaps = 9/223 (4%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 7 SETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 66
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATI 144
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA I
Sbjct: 67 TEAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFI 126
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K ++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 127 KQIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNV 185
Query: 205 PYTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
Y + F+ G PY + + + + G +GG
Sbjct: 186 SYADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGG 228
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K+
Sbjct: 441 GAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKIN 500
Query: 107 TE 108
E
Sbjct: 501 EE 502
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 92 VDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVS-LQE 150
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTE 108
R I I G + A +++ K++ +
Sbjct: 151 RCITIIGDKENNKNACKMILSKIVED 176
>gi|24645370|ref|NP_731356.1| pasilla, isoform C [Drosophila melanogaster]
gi|11526808|gb|AAG36790.1|AF220423_1 PASILLA splice variant 4 [Drosophila melanogaster]
gi|23170800|gb|AAF54378.2| pasilla, isoform C [Drosophila melanogaster]
Length = 561
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 125/232 (53%), Gaps = 9/232 (3%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P L E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT
Sbjct: 42 PAFQLQQSFCETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTT 101
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGS 135
+R+ +I+G+ + I+ ++ ++DK+ + ++ D +K +++++VPNS+ G
Sbjct: 102 ERVCLITGSTEAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGM 161
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
IIGK GA IK ++S + ++IS+ + L +R +T+ G + A ++IL K+ ED
Sbjct: 162 IIGKGGAFIKQIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVED 220
Query: 196 TLYSQTMTVPYTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
+ V Y + F+ G PY + + + + G +GG
Sbjct: 221 PQSGTCLNVSYADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGG 272
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K+
Sbjct: 485 GAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKIN 544
Query: 107 TE 108
E
Sbjct: 545 EE 546
>gi|307213191|gb|EFN88688.1| RNA-binding protein Nova-1 [Harpegnathos saltator]
Length = 514
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 111/179 (62%), Gaps = 9/179 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEAIM 105
Query: 96 RAVDLVIDKLLT--ELHAEDQAD-DVGTKT-----KLRLIVPNSSCGSIIGKAGATIKSF 147
+D +++K+ +L ++ D D G T +++++VPNS+ G IIGKAG IK
Sbjct: 106 AVMDFIMEKIREKPDLTSKTTVDFDSGKATAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++S + ++IS+ L +R +T+ G + AL +IL K+++D + V Y
Sbjct: 166 KEESGSYVQISQKAKD-LSLQERCITVIGEKENNRNALLMILAKVADDPQSGTCLNVSY 223
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G + I A
Sbjct: 432 IAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTITGYPNAINTA-QY 490
Query: 101 VIDKLLTELHAE 112
+I++ ++E A+
Sbjct: 491 LIEQRISEEEAK 502
>gi|326674258|ref|XP_003200102.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Danio rerio]
Length = 517
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 110/183 (60%), Gaps = 12/183 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT++ +
Sbjct: 79 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 138
Query: 96 RAVDLVIDKLLTELHAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGATI 144
D + +K+ + + + V + +LIVPNS+ G IIGK GAT+
Sbjct: 139 NVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATV 198
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S + +
Sbjct: 199 KAVMEQSGAWVQLSQKPDG-INLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNI 257
Query: 205 PYT 207
Y+
Sbjct: 258 SYS 260
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 434 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSPAATQA 493
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 494 AQYLISQRITYE 505
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 80 TTDRIIMISGTIDEILRAVD-LVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
T + +G + L A LV LL TE AE G K + + VP + G+I+
Sbjct: 394 TLGSLAAATGATNGYLSAASPLVASSLLATEKLAE------GAKDVVEIAVPENLVGAIL 447
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
GK G T+ + + + A I+IS+ G +R VT+TG+ A LI +++
Sbjct: 448 GKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSPAATQAAQYLISQRIT 503
>gi|260064185|gb|ACX30053.1| MIP13670p [Drosophila melanogaster]
Length = 346
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 115/198 (58%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 143 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 202
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 203 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 262
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 263 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 321
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 322 YADVSGPVANFNPTGSPY 339
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 227 VDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDV-SLQE 285
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTE 108
R I I G + A +++ K++ +
Sbjct: 286 RCITIIGDKENNKNACKMILSKIVED 311
>gi|25012554|gb|AAN71378.1| RE36563p, partial [Drosophila melanogaster]
Length = 605
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 125/232 (53%), Gaps = 9/232 (3%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P L E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT
Sbjct: 86 PAFQLQQSFCETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTT 145
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGS 135
+R+ +I+G+ + I+ ++ ++DK+ + ++ D +K +++++VPNS+ G
Sbjct: 146 ERVCLITGSTEAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGM 205
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
IIGK GA IK ++S + ++IS+ + L +R +T+ G + A ++IL K+ ED
Sbjct: 206 IIGKGGAFIKQIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVED 264
Query: 196 TLYSQTMTVPYTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
+ V Y + F+ G PY + + + + G +GG
Sbjct: 265 PQSGTCLNVSYADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGG 316
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K+
Sbjct: 529 GAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKIN 588
Query: 107 TE 108
E
Sbjct: 589 EE 590
>gi|442618214|ref|NP_001262415.1| pasilla, isoform R [Drosophila melanogaster]
gi|440217247|gb|AGB95797.1| pasilla, isoform R [Drosophila melanogaster]
Length = 780
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 115/198 (58%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 271 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 330
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 331 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 390
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 391 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 449
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 450 YADVSGPVANFNPTGSPY 467
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K+
Sbjct: 704 GAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKIN 763
Query: 107 TE 108
E
Sbjct: 764 EE 765
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 355 VDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDV-SLQE 413
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTE 108
R I I G + A +++ K++ +
Sbjct: 414 RCITIIGDKENNKNACKMILSKIVED 439
>gi|195445981|ref|XP_002070572.1| GK10958 [Drosophila willistoni]
gi|194166657|gb|EDW81558.1| GK10958 [Drosophila willistoni]
Length = 578
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 112/194 (57%), Gaps = 9/194 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+ + I+
Sbjct: 67 HMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEGIM 126
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+D ++DK+ + + D +K +++++VPNS+ G IIGK GA IK +
Sbjct: 127 TVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKE 186
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 187 ESGSYVQISQKPKDVS-LQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADV 245
Query: 210 GVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 246 SGPVANFNPTGSPY 259
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GAV+G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K+
Sbjct: 502 GAVLGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGHPSAIAKAQCLIEQKIN 561
Query: 107 TE 108
E
Sbjct: 562 EE 563
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 143 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVS 202
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+R I I G + A +++ K++ +
Sbjct: 203 -LQERCITIIGDKENNKNACKMILSKIVED 231
>gi|51472291|gb|AAU04539.1| neurological oncogenic ventral antigen protein [Danio rerio]
Length = 473
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 115/199 (57%), Gaps = 14/199 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT++ +
Sbjct: 64 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 123
Query: 96 RAVDLVIDKLLTELHAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGATI 144
D + +K+ + + + V + +L+VPNS+ G IIGK GAT+
Sbjct: 124 NVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLVVPNSTAGLIIGKGGATV 183
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S + +
Sbjct: 184 KAVMEQSGAWVQLSQKPDG-INLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNI 242
Query: 205 PYT--YAGVFFSGFHGMPY 221
Y+ V S G PY
Sbjct: 243 SYSNISGPVANSNPTGSPY 261
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 419 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGS 472
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 80 TTDRIIMISGTIDEILRAVD-LVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
T + +G + L A LV LL TE AE G K + + VP + G+I+
Sbjct: 379 TLGSLAAATGATNGYLSAASPLVASSLLATEKLAE------GAKDVVEIAVPENLVGAIL 432
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
GK G T+ + + + A I+IS+ G +R VT+TG+
Sbjct: 433 GKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGS 472
>gi|161078120|ref|NP_001036697.1| pasilla, isoform J [Drosophila melanogaster]
gi|19527741|gb|AAL89985.1| AT03366p [Drosophila melanogaster]
gi|113194765|gb|ABI31154.1| pasilla, isoform J [Drosophila melanogaster]
Length = 539
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 123/222 (55%), Gaps = 9/222 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 30 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 89
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 90 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 149
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 150 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 208
Query: 206 YTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
Y + F+ G PY + + + + G +GG
Sbjct: 209 YADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGG 250
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K+
Sbjct: 463 GAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKIN 522
Query: 107 TE 108
E
Sbjct: 523 EE 524
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 114 VDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVS-LQE 172
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTE 108
R I I G + A +++ K++ +
Sbjct: 173 RCITIIGDKENNKNACKMILSKIVED 198
>gi|320542558|ref|NP_001189200.1| pasilla, isoform L [Drosophila melanogaster]
gi|318068744|gb|ADV37291.1| pasilla, isoform L [Drosophila melanogaster]
Length = 758
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 115/198 (58%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 249 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 308
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 309 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 368
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 369 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 427
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 428 YADVSGPVANFNPTGSPY 445
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K+
Sbjct: 682 GAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKIN 741
Query: 107 TE 108
E
Sbjct: 742 EE 743
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 333 VDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDV-SLQE 391
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTE 108
R I I G + A +++ K++ +
Sbjct: 392 RCITIIGDKENNKNACKMILSKIVED 417
>gi|194741910|ref|XP_001953430.1| GF17214 [Drosophila ananassae]
gi|190626489|gb|EDV42013.1| GF17214 [Drosophila ananassae]
Length = 532
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 121/222 (54%), Gaps = 9/222 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ +D ++DK+ + + D +K +++++VPNS+ G IIGK GA IK
Sbjct: 123 EAIMFVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 182
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 183 QIKEESGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 241
Query: 206 YTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
Y + F+ G PY + + + + G +GG
Sbjct: 242 YADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGG 283
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T + + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 143 TTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVS 202
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+R I I G + A +++ K++ +
Sbjct: 203 -LQERCITIIGDKENNKNACKMILSKIVED 231
>gi|24645368|ref|NP_731355.1| pasilla, isoform D [Drosophila melanogaster]
gi|23170799|gb|AAN13428.1| pasilla, isoform D [Drosophila melanogaster]
Length = 583
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 123/222 (55%), Gaps = 9/222 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 74 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 133
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 134 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 193
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 194 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 252
Query: 206 YTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
Y + F+ G PY + + + + G +GG
Sbjct: 253 YADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGG 294
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K+
Sbjct: 507 GAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKIN 566
Query: 107 TE 108
E
Sbjct: 567 EE 568
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 158 VDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDV-SLQE 216
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTE 108
R I I G + A +++ K++ +
Sbjct: 217 RCITIIGDKENNKNACKMILSKIVED 242
>gi|161078112|ref|NP_001036692.1| pasilla, isoform F [Drosophila melanogaster]
gi|164449760|ref|NP_731351.3| pasilla, isoform H [Drosophila melanogaster]
gi|164449762|ref|NP_731352.3| pasilla, isoform G [Drosophila melanogaster]
gi|320542556|ref|NP_001189199.1| pasilla, isoform N [Drosophila melanogaster]
gi|320542564|ref|NP_001189203.1| pasilla, isoform O [Drosophila melanogaster]
gi|11526806|gb|AAG36789.1|AF220422_1 PASILLA splice variant 3 [Drosophila melanogaster]
gi|158030195|gb|AAF54377.3| pasilla, isoform F [Drosophila melanogaster]
gi|158030196|gb|AAN13425.2| pasilla, isoform G [Drosophila melanogaster]
gi|158030197|gb|AAN13424.2| pasilla, isoform H [Drosophila melanogaster]
gi|318068743|gb|ADV37290.1| pasilla, isoform N [Drosophila melanogaster]
gi|318068747|gb|ADV37294.1| pasilla, isoform O [Drosophila melanogaster]
Length = 572
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 123/222 (55%), Gaps = 9/222 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 123 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 182
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 183 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 241
Query: 206 YTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
Y + F+ G PY + + + + G +GG
Sbjct: 242 YADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGG 283
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K+
Sbjct: 496 GAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKIN 555
Query: 107 TE 108
E
Sbjct: 556 EE 557
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 147 VDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDV-SLQE 205
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTE 108
R I I G + A +++ K++ +
Sbjct: 206 RCITIIGDKENNKNACKMILSKIVED 231
>gi|24645366|ref|NP_731354.1| pasilla, isoform B [Drosophila melanogaster]
gi|11526802|gb|AAG36787.1|AF220420_1 PASILLA splice variant 1 [Drosophila melanogaster]
gi|11526804|gb|AAG36788.1|AF220421_1 PASILLA splice variant 2 [Drosophila melanogaster]
gi|23170798|gb|AAN13427.1| pasilla, isoform B [Drosophila melanogaster]
Length = 475
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 123/222 (55%), Gaps = 9/222 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 30 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 89
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 90 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 149
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 150 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 208
Query: 206 YTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
Y + F+ G PY + + + + G +GG
Sbjct: 209 YADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGG 250
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 114 VDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVS-LQE 172
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTE 108
R I I G + A +++ K++ +
Sbjct: 173 RCITIIGDKENNKNACKMILSKIVED 198
>gi|194903195|ref|XP_001980824.1| GG16798 [Drosophila erecta]
gi|190652527|gb|EDV49782.1| GG16798 [Drosophila erecta]
Length = 572
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 122/222 (54%), Gaps = 9/222 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 123 EAIMVVLEFIMDKIREKPDLTNKIVDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 182
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ L +R +T+ G + A ++IL K+ ED + V
Sbjct: 183 QIKEESGSYVQISQKPKDVS-LQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 241
Query: 206 YTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
Y + F+ G PY + + + + G +GG
Sbjct: 242 YADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGG 283
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA++G G ++ + Q SGA +Q+S+ F PGT +RI+ I+G I +A L+ K+
Sbjct: 496 GAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKIN 555
Query: 107 TE 108
E
Sbjct: 556 EE 557
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ + +
Sbjct: 147 VDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVS-LQE 205
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTE 108
R I I G + A +++ K++ +
Sbjct: 206 RCITIIGDKENNKNACKMILSKIVED 231
>gi|195572282|ref|XP_002104125.1| GD18616 [Drosophila simulans]
gi|194200052|gb|EDX13628.1| GD18616 [Drosophila simulans]
Length = 330
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 108/177 (61%), Gaps = 7/177 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+ + I+
Sbjct: 82 HMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIM 141
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIKSFMD 149
++ ++DK+ + ++ DV +K +++++VPNS+ G IIGK GA IK +
Sbjct: 142 VVMEFIMDKIREKPDLTNKIVDVESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKE 201
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
+S + ++IS+ L +R +T+ G + A ++IL K+ ED + V Y
Sbjct: 202 ESGSYVQISQKPKD-VSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSY 257
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ + +R I
Sbjct: 166 SKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDV-SLQERCIT 224
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNS-SCGSI-IGKAGATI 144
I G + A +++ K++ ED P S +C ++ G G ++
Sbjct: 225 IIGDKENNKNACKMILSKIV-----ED---------------PQSGTCLNVSYGPNGRSL 264
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A ++IS+ G +R+VT+TG +A LI K++E+
Sbjct: 265 VEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAKAQYLIEQKINEE 315
>gi|269784927|ref|NP_001161615.1| NOVA-like protein [Saccoglossus kowalevskii]
gi|268054231|gb|ACY92602.1| NOVA-like protein [Saccoglossus kowalevskii]
Length = 516
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 107/164 (65%), Gaps = 6/164 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L+ + AG+VIGKGG T+ Q ++GA I+LS+S++++PGT++R+++I+GT++ +
Sbjct: 48 LKMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKSNDYYPGTSERVVLITGTVESLTA 107
Query: 97 AVDLVIDKL-----LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
+ VI+K+ L + A ++++I+PNS+ G IIGK GATIK+FM+ +
Sbjct: 108 VGNFVIEKVRDSPQLAAKTGNESAVSQERARQVKIIIPNSTAGLIIGKGGATIKAFMEQT 167
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ ++IS+ L++R++T++G D +A+ ++ K+ ED
Sbjct: 168 GSKLQISQKSEGVN-LSERVLTISGEGDANKKAMNAVISKVQED 210
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
LS D + T + V L GA++GKGG T+ +FQ SGARIQ+S+ E+ PGT +R +
Sbjct: 425 LSKDAAKDST-LEIEVPETLVGAILGKGGKTLVEFQQCSGARIQISKKGEYVPGTRNRKV 483
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
+I+G A LV ++ E
Sbjct: 484 IITGNNLATQTAHYLVTQRITQE 506
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ ++ ++ N AG +IGKGG+TI F Q+G+++Q+S+ E ++R++ ISG
Sbjct: 135 ERARQVKIIIPNSTAGLIIGKGGATIKAFMEQTGSKLQISQKSEGV-NLSERVLTISGEG 193
Query: 92 DEILRAVDLVIDKL 105
D +A++ VI K+
Sbjct: 194 DANKKAMNAVISKV 207
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 21/96 (21%)
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
TEL ++D A D + L + VP + G+I+GK G T+ F S A I+IS+ G
Sbjct: 423 TEL-SKDAAKD----STLEIEVPETLVGAILGKGGKTLVEFQQCSGARIQISKKGEYVPG 477
Query: 167 LNDRLVTLTG----------------TLDEQMRALE 186
+R V +TG T +EQ RAL+
Sbjct: 478 TRNRKVIITGNNLATQTAHYLVTQRITQEEQNRALK 513
>gi|161078118|ref|NP_001036691.1| pasilla, isoform I [Drosophila melanogaster]
gi|113194762|gb|ABI31151.1| pasilla, isoform I [Drosophila melanogaster]
Length = 519
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 115/198 (58%), Gaps = 9/198 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 74 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 133
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 134 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 193
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 194 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 252
Query: 206 YTYAGVFFSGFH--GMPY 221
Y + F+ G PY
Sbjct: 253 YADVSGPVANFNPTGSPY 270
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 158 VDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDV-SLQE 216
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTE 108
R I I G + A +++ K++ +
Sbjct: 217 RCITIIGDKENNKNACKMILSKIVED 242
>gi|51092069|gb|AAT94448.1| RE39088p [Drosophila melanogaster]
Length = 563
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 123/222 (55%), Gaps = 9/222 (4%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ LV +GA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+
Sbjct: 118 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 177
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
+ I+ ++ ++DK+ + ++ D +K +++++VPNS+ G IIGK GA IK
Sbjct: 178 EAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIK 237
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + ++IS+ + L +R +T+ G + A ++IL K+ ED + V
Sbjct: 238 QIKEESGSYVQISQ-KPTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVS 296
Query: 206 YTYAGVFFSGFH--GMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
Y + F+ G PY + + + + G +GG
Sbjct: 297 YADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGG 338
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V + S E+ ++ LV N AG +IGKGG+ I + +SG+ +Q+S+ +
Sbjct: 202 VDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDV-SLQE 260
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTE 108
R I I G + A +++ K++ +
Sbjct: 261 RCITIIGDKENNKNACKMILSKIVED 286
>gi|383863653|ref|XP_003707294.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Megachile
rotundata]
Length = 514
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 104/168 (61%), Gaps = 9/168 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GA++++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAIM 105
Query: 96 RAVDLVIDK--------LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+D ++DK L T + +E +++++VPNS+ G IIGKAG IK
Sbjct: 106 AVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++S + ++IS+ L +R +T+ G + AL +IL K+++D
Sbjct: 166 KEESGSYVQISQKAKD-VSLQERCITVIGEKENNRNALMMILAKVADD 212
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G + I A
Sbjct: 432 IAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTITGYPNAINTA-QY 490
Query: 101 VIDKLLTELHAE 112
+I++ ++E A+
Sbjct: 491 LIEQRISEEEAK 502
>gi|383863655|ref|XP_003707295.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Megachile
rotundata]
Length = 535
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 104/168 (61%), Gaps = 9/168 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GA++++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 67 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAIM 126
Query: 96 RAVDLVIDK--------LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+D ++DK L T + +E +++++VPNS+ G IIGKAG IK
Sbjct: 127 AVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 186
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++S + ++IS+ L +R +T+ G + AL +IL K+++D
Sbjct: 187 KEESGSYVQISQKAKD-VSLQERCITVIGEKENNRNALMMILAKVADD 233
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I+G + I A
Sbjct: 453 IAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTITGYPNAINTA-QY 511
Query: 101 VIDKLLTELHAE 112
+I++ ++E A+
Sbjct: 512 LIEQRISEEEAK 523
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ ++ LV N AG +IGK G+ I + +SG+ +Q+S+ + +R I + G
Sbjct: 158 ERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVS-LQERCITVIGEK 216
Query: 92 DEILRAVDLVIDKL 105
+ A+ +++ K+
Sbjct: 217 ENNRNALMMILAKV 230
>gi|410910370|ref|XP_003968663.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 496
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 120/211 (56%), Gaps = 16/211 (7%)
Query: 12 PDVHGKRSTAPVKSLSSDPT----EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR 67
PD + P ++ S+ T E +++ L+ + AG++IGKGG TI Q ++GA
Sbjct: 30 PDSRKRPLETPTEASSTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGAT 89
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG-------- 119
I+LS+S +F+PGTT+R+ +I GT++ + + + +K+ + + + V
Sbjct: 90 IKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSTQKTEPVSILQPQTTV 149
Query: 120 ---TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
+ +LIVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G
Sbjct: 150 NPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEG-INLQERVVTISG 208
Query: 177 TLDEQMRALELILLKLSEDTLYSQTMTVPYT 207
++ +A+E+I+ K+ ED S + + Y+
Sbjct: 209 EPEQNRKAVEIIVQKIQEDPQSSSCLNISYS 239
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+ +
Sbjct: 413 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGS-QAATQ 471
Query: 97 AVDLVIDKLLT 107
A +I + +T
Sbjct: 472 AAQYLISQRIT 482
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A LV LL TE AE G K + + VP + G+I+GK G T+ + + + A I
Sbjct: 391 ASPLVASSLLATEKLAE------GAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARI 444
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
+IS+ G +R VT+TG+ A LI +++
Sbjct: 445 QISKKGEFIPGTRNRKVTITGSQAATQAAQYLISQRIT 482
>gi|432895615|ref|XP_004076076.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oryzias
latipes]
Length = 444
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 116/203 (57%), Gaps = 14/203 (6%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+
Sbjct: 3 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV 62
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKA 140
+ + + + +K+ + + + V + +LIVPNS+ G IIGK
Sbjct: 63 EALNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKG 122
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S
Sbjct: 123 GATVKAVMEQSGAWVQLSQKPEG-INLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSS 181
Query: 201 TMTVPYTYAG--VFFSGFHGMPY 221
+ + Y+ V S G PY
Sbjct: 182 CLNISYSNVSGPVANSNPTGSPY 204
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 361 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 420
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 421 AQYLISQRITYE 432
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 100 LVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
L+ LL D A DV + + VP + G+I+GK G T+ + + + A I+IS+
Sbjct: 342 LMASSLLATEKLADGAKDV-----VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 396
Query: 160 LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G +R VT+TG+ A LI +++
Sbjct: 397 KGEFIPGTRNRKVTITGSPAATQAAQYLISQRIT 430
>gi|113677906|ref|NP_001038254.1| neuro-oncological ventral antigen 1 [Danio rerio]
gi|213624727|gb|AAI71499.1| Neuro-oncological ventral antigen 1 [Danio rerio]
gi|213627516|gb|AAI71495.1| Neuro-oncological ventral antigen 1 [Danio rerio]
Length = 495
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 110/183 (60%), Gaps = 12/183 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT++ +
Sbjct: 58 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 117
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTK-----------TKLRLIVPNSSCGSIIGKAGATI 144
+ + +K+ + + + V + +LIVPNS+ G IIGK GAT+
Sbjct: 118 GVHNFIAEKVREMPQSSQKTEPVSILQPQTTVNPDRIKQAKLIVPNSTAGLIIGKGGATV 177
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S + +
Sbjct: 178 KAVMEQSGAWVQLSQKPEGIN-LQERVVTVSGEPEQNRKAVEIIVQKIQEDPQSSSCLNI 236
Query: 205 PYT 207
Y+
Sbjct: 237 SYS 239
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 412 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 471
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 472 AQYLISQRITYE 483
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 100 LVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
LV LL TE AE G K + + VP + G+I+GK G T+ + + + A I+IS
Sbjct: 393 LVASSLLGTEKLAE------GGKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQIS 446
Query: 159 RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
+ G +R VT+TG+ A LI +++
Sbjct: 447 KKGEFIPGTRNRKVTITGSPAATQAAQYLISQRIT 481
>gi|432895613|ref|XP_004076075.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oryzias
latipes]
Length = 503
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 116/203 (57%), Gaps = 14/203 (6%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E +++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+
Sbjct: 62 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV 121
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKA 140
+ + + + +K+ + + + V + +LIVPNS+ G IIGK
Sbjct: 122 EALNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKG 181
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S
Sbjct: 182 GATVKAVMEQSGAWVQLSQKPEGIN-LQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSS 240
Query: 201 TMTVPYTYAG--VFFSGFHGMPY 221
+ + Y+ V S G PY
Sbjct: 241 CLNISYSNVSGPVANSNPTGSPY 263
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 420 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 479
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 480 AQYLISQRITYE 491
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 100 LVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
L+ LL D A DV + + VP + G+I+GK G T+ + + + A I+IS+
Sbjct: 401 LMASSLLATEKLADGAKDV-----VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 455
Query: 160 LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G +R VT+TG+ A LI +++
Sbjct: 456 KGEFIPGTRNRKVTITGSPAATQAAQYLISQRIT 489
>gi|348524725|ref|XP_003449873.1| PREDICTED: RNA-binding protein Nova-1-like [Oreochromis niloticus]
Length = 503
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 115/199 (57%), Gaps = 14/199 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT++ +
Sbjct: 66 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 125
Query: 96 RAVDLVIDKLLTELHAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGATI 144
+ + +K+ + + + V + +LIVPNS+ G IIGK GAT+
Sbjct: 126 GVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATV 185
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S + +
Sbjct: 186 KAVMEQSGAWVQLSQKPEG-INLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNI 244
Query: 205 PYTYAG--VFFSGFHGMPY 221
Y+ V S G PY
Sbjct: 245 SYSNVSGPVANSNPTGSPY 263
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 420 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 479
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 480 AQYLISQRITYE 491
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 100 LVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
L+ LL D A DV + + VP + G+I+GK G T+ + + + A I+IS+
Sbjct: 401 LMASSLLATEKLADGAKDV-----VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 455
Query: 160 LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G +R VT+TG+ A LI +++
Sbjct: 456 KGEFIPGTRNRKVTITGSPAATQAAQYLISQRIT 489
>gi|340714094|ref|XP_003395567.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus terrestris]
gi|350427987|ref|XP_003494948.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus impatiens]
Length = 514
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 102/168 (60%), Gaps = 9/168 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIM 105
Query: 96 RAVDLVIDK--------LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+D ++DK L T + E +++++VPNS+ G IIGKAG IK
Sbjct: 106 AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++ + ++IS+ L +R +T+ G + AL +IL K+++D
Sbjct: 166 KEECGSYVQISQKAKD-VSLQERCITVIGEKENNRNALMMILAKVADD 212
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 29 DPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
D K T + ++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I
Sbjct: 419 DANNKETKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTI 478
Query: 88 SGTIDEILRAVDLVIDKLLTELHAE 112
+G + I A +I++ ++E A+
Sbjct: 479 TGYPNAIGTA-QYLIEQRISEEEAK 502
>gi|380026049|ref|XP_003696774.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Apis florea]
Length = 514
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 102/168 (60%), Gaps = 9/168 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIM 105
Query: 96 RAVDLVIDK--------LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+D ++DK L T + E +++++VPNS+ G IIGKAG IK
Sbjct: 106 AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++ + ++IS+ L +R +T+ G + AL +IL K+++D
Sbjct: 166 KEECGSYVQISQKAKD-VSLQERCITVIGEKENNRNALMMILAKVADD 212
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 29 DPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
D K T + ++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I
Sbjct: 419 DANNKETKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTI 478
Query: 88 SGTIDEILRAVDLVIDKLLTELHAE 112
+G + I A +I++ ++E A+
Sbjct: 479 TGYPNAIGTA-QYLIEQRISEEEAK 502
>gi|198433420|ref|XP_002121389.1| PREDICTED: similar to neuro-oncological ventral antigen 1 [Ciona
intestinalis]
Length = 543
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 114/177 (64%), Gaps = 6/177 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L+ AGAVIGKGG I Q SGA I+LS++ +F+PGT DR+++I GT + +++
Sbjct: 49 LKVLIPGYAAGAVIGKGGQIIVQLQKDSGAIIKLSKAKDFYPGTQDRVVLIQGTAEGLMK 108
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK-LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+ +I+K+ +D A +G + K +++IVPN++ G +IGKAGATIK+ M++S + +
Sbjct: 109 VQNTIIEKVYEFPVPKDLAAIIGDRPKQVKIIVPNTTAGLVIGKAGATIKTIMEESGSKV 168
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY-TYAGV 211
++S+ + +R++T+ G + M A +I+ K+ +D Q+ + P+ +Y+G+
Sbjct: 169 QLSQKPDG-VNVQERVITIKGEKHQLMTASNIIIDKIKDD---PQSASCPHISYSGI 221
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 24 KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
K L++ ++P ++ +V N AG VIGK G+TI +SG+++QLS+ + +R
Sbjct: 124 KDLAAIIGDRPKQVKIIVPNTTAGLVIGKAGATIKTIMEESGSKVQLSQKPDGV-NVQER 182
Query: 84 IIMISGTIDEILRAVDLVIDKL 105
+I I G +++ A +++IDK+
Sbjct: 183 VITIKGEKHQLMTASNIIIDKI 204
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
ST + S+ + I + L GAV+GK G T+ ++Q SGA+IQ+S+ ++
Sbjct: 442 HSTVSILSIEKSSDGQKETIELAIPENLIGAVLGKAGRTLVEYQDVSGAKIQISKKGDYV 501
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQ 114
GT +R + I+G A L+ ++ + +A Q
Sbjct: 502 AGTRNRRVTITGKPPCPQTAQFLITQRVASAQNARAQ 538
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E +D G K + L +P + G+++GKAG T+ + D S A I+IS+ G
Sbjct: 448 LSIEKSSD--GQKETIELAIPENLIGAVLGKAGRTLVEYQDVSGAKIQISKKGDYVAGTR 505
Query: 169 DRLVTLTG 176
+R VT+TG
Sbjct: 506 NRRVTITG 513
>gi|380026051|ref|XP_003696775.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Apis florea]
Length = 522
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 102/168 (60%), Gaps = 9/168 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIM 105
Query: 96 RAVDLVIDK--------LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+D ++DK L T + E +++++VPNS+ G IIGKAG IK
Sbjct: 106 AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++ + ++IS+ L +R +T+ G + AL +IL K+++D
Sbjct: 166 KEECGSYVQISQKAKD-VSLQERCITVIGEKENNRNALMMILAKVADD 212
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 29 DPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
D K T + ++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I
Sbjct: 427 DANNKETKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTI 486
Query: 88 SGTIDEILRAVDLVIDKLLTELHAE 112
+G + I A +I++ ++E A+
Sbjct: 487 TGYPNAIGTA-QYLIEQRISEEEAK 510
>gi|328784994|ref|XP_003250531.1| PREDICTED: RNA-binding protein Nova-2-like [Apis mellifera]
Length = 514
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 102/168 (60%), Gaps = 9/168 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R+ +I+G+++ I+
Sbjct: 46 HLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAIM 105
Query: 96 RAVDLVIDK--------LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+D ++DK L T + E +++++VPNS+ G IIGKAG IK
Sbjct: 106 AVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQI 165
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++ + ++IS+ L +R +T+ G + AL +IL K+++D
Sbjct: 166 KEECGSYVQISQKAKD-VSLQERCITVIGEKENNRNALMMILAKVADD 212
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 29 DPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
D K T + ++ + GA++G GG + + Q SGA IQ+S+ F PGT +RI+ I
Sbjct: 419 DANNKETKKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMFAPGTRNRIVTI 478
Query: 88 SGTIDEILRAVDLVIDKLLTELHAE 112
+G + I A +I++ ++E A+
Sbjct: 479 TGYPNAIGTA-QYLIEQRISEEEAK 502
>gi|410914634|ref|XP_003970792.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 501
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 115/199 (57%), Gaps = 14/199 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT++ +
Sbjct: 64 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 123
Query: 96 RAVDLVIDKLLTELHAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGATI 144
+ + +K+ + + + V + ++IVPNS+ G IIGK GAT+
Sbjct: 124 GVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKIIVPNSTAGLIIGKGGATV 183
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S + +
Sbjct: 184 KAVMEQSGAWVQLSQKPEG-INLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNI 242
Query: 205 PYTYAG--VFFSGFHGMPY 221
Y+ V S G PY
Sbjct: 243 SYSNVSGPVANSNPTGSPY 261
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 418 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 477
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 478 AQYLISQRITYE 489
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 100 LVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
L+ LL D A DV + + VP + G+I+GK G T+ + + + A I+IS+
Sbjct: 399 LMASSLLATEKLADGAKDV-----VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 453
Query: 160 LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G +R VT+TG+ A LI +++
Sbjct: 454 KGEFIPGTRNRKVTITGSPAATQAAQYLISQRIT 487
>gi|326378247|gb|ADZ57223.1| neuro-oncological ventral antigen [Branchiostoma lanceolatum]
Length = 508
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 129/226 (57%), Gaps = 12/226 (5%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + ++ L+ + AG++IGKGG TI Q ++GA I+LS+S++F+PGTT+RI++I+G
Sbjct: 61 PEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITG 120
Query: 90 TIDEILRAVDLVIDKLL------TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGAT 143
+ D + +++K+ + +E A++ K +++++VPNS+ G IIGK GAT
Sbjct: 121 SEDSLKSVHKFLMEKIGQAPRPPAKSPSEQNANNNRAK-QVKIVVPNSTAGLIIGKGGAT 179
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
IK M+ + + ++IS+ S L +R++T+TG ++ +A I+ K+ ED
Sbjct: 180 IKFIMEQTGSRVQISQKATSGINLPERVITITGEPEQNDKACAFIVNKIVEDPQSGSCPN 239
Query: 204 VPY-TYAG-VFFSGFHGMPYGAVPPPV---PAVPHNTAAHYGPNMG 244
+ Y TY G V + G PY + P+ A P AA N+G
Sbjct: 240 ISYATYTGPVANANPTGSPYASPMSPLQNGSASPTALAAQSLSNLG 285
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ +FQ SGARIQ+S+ EF PGT +R + I+GT
Sbjct: 429 VELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQT 488
Query: 97 AVDLVIDKLLTE--LHAEDQ 114
A LV ++ E + A+ Q
Sbjct: 489 AQYLVRARIAQEEAMRAKKQ 508
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + L VP + G+I+GK G T+ F + S A I+IS+ G N+R VT+TGT
Sbjct: 424 GSKNVVELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTP 483
Query: 179 DEQMRALELILLKLSED 195
A L+ +++++
Sbjct: 484 AATQTAQYLVRARIAQE 500
>gi|159475617|ref|XP_001695915.1| hypothetical protein CHLREDRAFT_191517 [Chlamydomonas reinhardtii]
gi|158275475|gb|EDP01252.1| predicted protein [Chlamydomonas reinhardtii]
Length = 338
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 113/209 (54%), Gaps = 22/209 (10%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ LVSN +AG+VIGK G+ I Q SGAR+QLSR+ EF+PGT+DR++++SG++ +L A
Sbjct: 46 KLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGEFYPGTSDRVLLLSGSLHAVLTA 105
Query: 98 VDLVIDKLLTELHAEDQA------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ L+++K+ ++ A A +D G + +++L + CG +IG G T++
Sbjct: 106 IFLILEKISRDVSAGAGANGAKRGVPVKKPEDAG-QAQVKLALSRRLCGLLIGHKGQTVR 164
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
F+ DS + I++ L +R +T++G D+ +RA+ LIL LS Y+ M
Sbjct: 165 DFIVDSGSTIRVQSLSELTPSDPERTITVSGARDQVLRAVALILNTLSMHEGYASYMDTT 224
Query: 206 YTYAGVFFSGFHGMPYGAVPPPVPAVPHN 234
A G V PP + N
Sbjct: 225 LQLA---------TNQGVVLPPRASSSKN 244
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 28/192 (14%)
Query: 30 PTEKP-----TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
P +KP ++ +S L G +IG G T+ DF SG+ I++ E P +R
Sbjct: 131 PVKKPEDAGQAQVKLALSRRLCGLLIGHKGQTVRDFIVDSGSTIRVQSLSELTPSDPERT 190
Query: 85 IMISGTIDEILRAVDLVIDKL-LTELHAE--DQADDVGT--------------------K 121
I +SG D++LRAV L+++ L + E +A D + T +
Sbjct: 191 ITVSGARDQVLRAVALILNTLSMHEGYASYMDTTLQLATNQGVVLPPRASSSKNVLSAVR 250
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
T+L L +P+ G+I+GK G+ + S+ IKIS +R V+++GT
Sbjct: 251 TQLTLYLPDDDVGAILGKKGSNLVEVQQSSRVTIKISDRSKMDPTTQEREVSISGTYSAV 310
Query: 182 MRALELILLKLS 193
A +I KLS
Sbjct: 311 KLAEAMIAEKLS 322
>gi|256079872|ref|XP_002576208.1| rna-binding protein related [Schistosoma mansoni]
gi|353231011|emb|CCD77429.1| rna-binding protein related [Schistosoma mansoni]
Length = 666
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 8/210 (3%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + + + LV + AGA+IGKGG I + Q+Q+ A++++S+++ F+PGTT+R+ +I G
Sbjct: 38 PAKGNVHFKILVPSIAAGAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERVCLIVG 97
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVG-----TKTKLRLIVPNSSCGSIIGKAGATI 144
TI+ ILR + +K+ + + + G +++++VPNS+ G IIGK G+ I
Sbjct: 98 TIESILRVFQYISEKIYEKPESVPKTGCEGRVLTERHKQVKILVPNSTAGMIIGKGGSFI 157
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K D + I++S+ L +R VT+ G L + A+ LIL K++ED S +
Sbjct: 158 KELKDTTGVFIQVSQ-KSKELNLAERCVTVAGELSQTRDAIALILSKIAEDPQSSSCPNI 216
Query: 205 PYT-YAGVFFSGF-HGMPYGAVPPPVPAVP 232
Y+ G S + G PY P +P
Sbjct: 217 SYSEIIGPVASAYPTGSPYALAVGSHPGLP 246
>gi|326378263|gb|ADZ57231.1| neuro-oncological ventral antigen [Branchiostoma floridae]
Length = 511
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 128/226 (56%), Gaps = 12/226 (5%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + ++ L+ + AG++IGKGG TI Q ++GA I+LS+S++F+PGTT+RI++I+G
Sbjct: 61 PEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITG 120
Query: 90 TIDEILRAVDLVIDKLLTELH------AEDQADDVGTKTKLRLIVPNSSCGSIIGKAGAT 143
+ D + +++K+ +E A++ K +++++VPNS+ G IIGK GAT
Sbjct: 121 SEDSLKSVHKFLMEKISQAPQPPAKSPSEQNANNNRAK-QVKIVVPNSTAGLIIGKGGAT 179
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
IK M+ + + ++IS+ + L +R++T+TG ++ +A I+ K+ ED
Sbjct: 180 IKFIMEQTGSRVQISQKATNGINLPERVITITGEPEQNDKACAFIVNKIVEDPQSGSCPN 239
Query: 204 VPY-TYAG-VFFSGFHGMPYGAVPPPV---PAVPHNTAAHYGPNMG 244
+ Y TY G V + G PY + P+ A P AA N+G
Sbjct: 240 ISYATYTGPVANANPTGSPYASPMSPLQNGSASPTALAAQSLSNLG 285
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ +FQ SGARIQ+S+ EF PGT +R + I+GT
Sbjct: 429 VELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQT 488
Query: 97 AVDLVIDKLLTE--LHAEDQ 114
A LV ++ E + A+ Q
Sbjct: 489 AQYLVRARIAQEEAMRAKKQ 508
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+K + L VP + G+I+GK G T+ F + S A I+IS+ G N+R VT+TGT
Sbjct: 424 GSKNVVELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTP 483
Query: 179 DEQMRALELILLKLSED 195
A L+ +++++
Sbjct: 484 AATQTAQYLVRARIAQE 500
>gi|428173185|gb|EKX42089.1| hypothetical protein GUITHDRAFT_74219, partial [Guillardia theta
CCMP2712]
Length = 268
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 101/165 (61%), Gaps = 9/165 (5%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+FL SN AG +IG+GG+TI+ Q ++GARI++S +E++PGT +RI++++G + I+ A
Sbjct: 1 QFLASNKDAGTLIGRGGNTISSLQQRTGARIRVSNGNEYYPGTQNRIVLLTGQLSNIMGA 60
Query: 98 VDLVIDKLLTELHAE-------DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
++ + ++ + D D G L L VP SCG +IG+ G I+ +++
Sbjct: 61 LEGSLREIYGDFSGHSAPSPPGDDRDSNG--IMLTLAVPEISCGLLIGRGGENIRVMVEE 118
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S I+++ DH G+ +RLV + G +D ++A+ELIL K+ ED
Sbjct: 119 SGCKIQLTNKDHLVPGITERLVLVVGQIDRVLKAVELILYKMWED 163
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 24/157 (15%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
G +IG+GG I +SG +IQL+ PG T+R++++ G ID +L+AV+L++ K+
Sbjct: 101 CGLLIGRGGENIRVMVEESGCKIQLTNKDHLVPGITERLVLVVGQIDRVLKAVELILYKM 160
Query: 106 L-----------TELHAEDQADDVGT-------------KTKLRLIVPNSSCGSIIGKAG 141
T+ +++ A D+ ++ + VP++ +I+G+ G
Sbjct: 161 WEDPKCRYDNPTTQYNSKPLASDLTKAVRNLQGSSMQPERSSYTVHVPDNLVPAILGRGG 220
Query: 142 ATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
IK M+ S A IK+S+ G N+R++++ G L
Sbjct: 221 QIIKEMMEVSGATIKVSQKGDFVPGTNNRIISIIGEL 257
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 20 TAPVKSL--SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
T V++L SS E+ +Y + N L A++G+GG I + SGA I++S+ +F
Sbjct: 185 TKAVRNLQGSSMQPERSSYTVHVPDN-LVPAILGRGGQIIKEMMEVSGATIKVSQKGDFV 243
Query: 78 PGTTDRIIMISGTIDEIL 95
PGT +RII I G + L
Sbjct: 244 PGTNNRIISIIGELTPCL 261
>gi|321468687|gb|EFX79671.1| hypothetical protein DAPPUDRAFT_225024 [Daphnia pulex]
Length = 573
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 112/195 (57%), Gaps = 10/195 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
Y++ LV + AGA+IGKGG TI Q + ARI++S++++F+PGTT+R+ +I GT + ++
Sbjct: 57 YLKVLVPSVAAGAIIGKGGETIAQVQKEVNARIKMSKANDFYPGTTERVCLIKGTTESVM 116
Query: 96 RAVDLVIDKLLTELHAEDQ-ADDVGTKT------KLRLIVPNSSCGSIIGKAGATIKSFM 148
+ + +K+ + + A D +KT +++++VPNS+ G IIGK G+ IK
Sbjct: 117 SMLTFICEKIRDKPDPNAKPAMDFDSKTPAERDKQVKILVPNSTAGMIIGKGGSFIKQIK 176
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY 208
++S A I+IS+ L +R +T+ G D +A +IL K++ED + V Y
Sbjct: 177 EESGAYIQISQKAKD-QALQERCITVIGDSDCNRKACCMILSKIAEDPQSGSCLNVSYAE 235
Query: 209 AGVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 236 VTGPVANFNPTGSPY 250
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S P E+ ++ LV N AG +IGKGGS I + +SGA IQ+S+ + +R I
Sbjct: 142 SKTPAERDKQVKILVPNSTAGMIIGKGGSFIKQIKEESGAYIQISQKAK-DQALQERCIT 200
Query: 87 ISGTIDEILRAVDLVIDKLLTE 108
+ G D +A +++ K+ +
Sbjct: 201 VIGDSDCNRKACCMILSKIAED 222
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G GG ++ + Q SGA IQ+S+ + PGT +R + ISGT + I A +I++
Sbjct: 462 IVGAILGPGGKSLLEIQHFSGANIQISKKGIYAPGTRNRWVTISGTPNAISTA-QYLIEQ 520
Query: 105 LLTELHAE 112
++E A+
Sbjct: 521 RISEEEAK 528
>gi|33516919|sp|Q80WA4.1|NOVA1_RAT RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1
gi|30230625|gb|AAP20872.1| neuro-oncological ventral antigen 1-like protein [Rattus
norvegicus]
Length = 474
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 114/203 (56%), Gaps = 22/203 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 50 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 108
Query: 96 RAVDLVIDKLLTEL---------------HAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
AV I + + E+ D + ++++IVPNS+ G IIGK
Sbjct: 109 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRI---KQVKIIVPNSTAGLIIGKG 165
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED
Sbjct: 166 GATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGS 224
Query: 201 TMTVPYT--YAGVFFSGFHGMPY 221
+ + Y V S G PY
Sbjct: 225 CLNISYANVTGPVANSNPTGFPY 247
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 388 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 447
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 448 TITGTPAATQAAQYLITQRITYE 470
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 386 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 443
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 444 NRKVTITGTPAATQAAQYLITQRIT 468
>gi|221122019|ref|XP_002164819.1| PREDICTED: RNA-binding protein Nova-1-like [Hydra magnipapillata]
Length = 400
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 115/190 (60%), Gaps = 10/190 (5%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
TE ++ L+ N AGA+IGKGG+ I + QS+ GA+I+LS + EF+PGT +RI++++G
Sbjct: 41 TESTPLLKVLIPNYAAGAIIGKGGANIGELQSRYGAKIRLSPNGEFYPGTEERIVILTGD 100
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTK-----TKLRLIVPNSSCGSIIGKAGATIK 145
+ +I+ + +IDK +HA+ G + K++++ PN++ G +IG+ G+TIK
Sbjct: 101 VSQIIDLHNYIIDK----VHADSMEGPKGMRDEDRGQKVKIVCPNATAGLVIGRGGSTIK 156
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
S ++++A I IS D S + +R++T+ G ++++ A ++ K++ D +
Sbjct: 157 SLQEETKAKIMISGRDESKV-MGERIITIAGNTEQRIEASRQVIGKIAADAENMSNKNLT 215
Query: 206 YTYAGVFFSG 215
Y+ +G +G
Sbjct: 216 YSGSGRNSNG 225
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I+ + + L GA++GK G T+++F SGA+IQ S ++F PGTTDRI+ I G +++
Sbjct: 317 IQMEIPDVLVGAILGKHGKTVHEFIQFSGAKIQFSAKNDFAPGTTDRILTIQGDLNQTQI 376
Query: 97 AVDLVIDKLL 106
A L+ K++
Sbjct: 377 AYFLINQKIM 386
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
+ + T +++ +P+ G+I+GK G T+ F+ S A I+ S + G DR++T+
Sbjct: 309 NQIKTTVSIQMEIPDVLVGAILGKHGKTVHEFIQFSGAKIQFSAKNDFAPGTTDRILTIQ 368
Query: 176 GTLDEQMRALELILLKL 192
G L++ A LI K+
Sbjct: 369 GDLNQTQIAYFLINQKI 385
>gi|451172115|ref|NP_001094011.1| RNA-binding protein Nova-1 [Rattus norvegicus]
Length = 482
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 109/186 (58%), Gaps = 20/186 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 50 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 108
Query: 96 RAVDLVIDKLLTEL---------------HAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
AV I + + E+ D + ++++IVPNS+ G IIGK
Sbjct: 109 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRI---KQVKIIVPNSTAGLIIGKG 165
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED
Sbjct: 166 GATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGS 224
Query: 201 TMTVPY 206
+ + Y
Sbjct: 225 CLNISY 230
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 388 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 447
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 448 TITGTPAATQAAQYLITQRITYE 470
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 386 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 443
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 444 NRKVTITGTPAATQAAQYLITQRIT 468
>gi|426243970|ref|XP_004015811.1| PREDICTED: RNA-binding protein Nova-2 [Ovis aries]
Length = 255
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 122/218 (55%), Gaps = 16/218 (7%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S E +++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++
Sbjct: 7 SSAEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLV 66
Query: 88 SGTIDEILRAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGS 135
GT E L AV I + + E+ A + + V + +LIVPNS+ G
Sbjct: 67 QGTA-EALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGL 125
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
IIGK GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED
Sbjct: 126 IIGKGGATVKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQED 184
Query: 196 TLYSQTMTVPYT-YAG-VFFSGFHGMPYGAVPPPVPAV 231
S + + Y AG V S G PY + +PAV
Sbjct: 185 PQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAV 222
>gi|195617550|gb|ACG30605.1| hypothetical protein [Zea mays]
Length = 104
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 67/99 (67%), Gaps = 5/99 (5%)
Query: 1 METNESSYVPSPDVHGKRS-----TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGS 55
ME S Y SP+ KR+ S D EKP ++RFLVSN AG +IGKGGS
Sbjct: 1 MEAPGSPYASSPESAPKRAPRSPPQQQPPSEEGDDKEKPIHLRFLVSNASAGCIIGKGGS 60
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
TINDFQSQSGARIQLSRSHEFFPGT DRIIM+SG E+
Sbjct: 61 TINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEV 99
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ DD LR +V N+S G IIGK G+TI F S A I++SR + G NDR++
Sbjct: 31 EEGDDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRII 90
Query: 173 TLTGTLDE 180
++G E
Sbjct: 91 MVSGLFGE 98
>gi|348537889|ref|XP_003456425.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oreochromis
niloticus]
Length = 496
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 127/251 (50%), Gaps = 42/251 (16%)
Query: 12 PDVHGKRSTAPVKSLSSDPT----EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR 67
PD + P ++ S+ T E +++ L+ + AG++IGKGG TI Q ++GA
Sbjct: 6 PDSRKRPLETPTEASSTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGAT 65
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK----------------------- 104
I+LS+S +F+PGTT+R+ +I GT++ + D + +K
Sbjct: 66 IKLSKSKDFYPGTTERVCLIQGTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTV 125
Query: 105 --------LLTELHAEDQADDVGTKTK----LRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
L T H + D K++ +LIVPNS+ G IIGK GAT+K+ M+ S
Sbjct: 126 NPDRVKQTLPTACHTTPKEDANPEKSRRANSAKLIVPNSTAGLIIGKGGATVKAVMEQSG 185
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT--YAG 210
A +++S+ L +R+VT++G ++ +A+E+I+ K+ ED S + + Y+
Sbjct: 186 AWVQLSQKPEG-INLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSNITGP 244
Query: 211 VFFSGFHGMPY 221
V S G PY
Sbjct: 245 VANSNPTGSPY 255
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+ +
Sbjct: 413 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGS-QAATQ 471
Query: 97 AVDLVIDKLLT 107
A +I + +T
Sbjct: 472 AAQYLISQRIT 482
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A LV LL TE AE G K + + VP + G+I+GK G T+ + + + A I
Sbjct: 391 ASPLVASSLLATEKLAE------GAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARI 444
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
+IS+ G +R VT+TG+ A LI +++
Sbjct: 445 QISKKGEFIPGTRNRKVTITGSQAATQAAQYLISQRIT 482
>gi|149051189|gb|EDM03362.1| neuro-oncological ventral antigen 1, isoform CRA_c [Rattus
norvegicus]
Length = 483
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 109/186 (58%), Gaps = 20/186 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 109
Query: 96 RAVDLVIDKLLTEL---------------HAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
AV I + + E+ D + ++++IVPNS+ G IIGK
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRI---KQVKIIVPNSTAGLIIGKG 166
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED
Sbjct: 167 GATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGS 225
Query: 201 TMTVPY 206
+ + Y
Sbjct: 226 CLNISY 231
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 389 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 448
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 449 TITGTPAATQAAQYLITQRITYE 471
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 387 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 444
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 445 NRKVTITGTPAATQAAQYLITQRIT 469
>gi|118137282|pdb|2ANN|A Chain A, Crystal Structure (I) Of Nova-1 Kh1KH2 DOMAIN TANDEM WITH
25 NT RNA Hairpin
Length = 178
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 107/178 (60%), Gaps = 26/178 (14%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 7 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 65
Query: 96 RAVDLVIDKLLTELHAE------------------DQADDVGTKTKLRLIVPNSSCGSII 137
AV I + + E+ D+A+ V ++IVPNS+ G II
Sbjct: 66 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRANQV------KIIVPNSTAGLII 119
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
GK GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED
Sbjct: 120 GKGGATVKAIMEQSGAWVQLSQKPDG-INLQNRVVTVSGEPEQNRKAVELIIQKIQED 176
>gi|443700302|gb|ELT99335.1| hypothetical protein CAPTEDRAFT_173082 [Capitella teleta]
Length = 552
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ LV + AGA+IGKGG TI D Q ++GA +++S++++F+PGT++R+ +++GT+D + +
Sbjct: 48 LKVLVPSIAAGAIIGKGGETITDIQKETGATVKMSKNNDFYPGTSERVCLVNGTLDSVRK 107
Query: 97 AVDLVIDKLLTE-------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ +++++ + E +A+ K +++++VPNS+ G +IGK GA I+ D
Sbjct: 108 VIVFIMERIREKPDPNPKPCEGEMKANYERHK-QMKILVPNSTAGMVIGKGGAFIRQIKD 166
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
DS A +++S+ L +R VT+ G ++ A++L+L K+ ED + + Y
Sbjct: 167 DSGAYVQVSQKSKDMS-LPERCVTIAGDTEQNREAIDLVLEKIMEDPQSASCPNISY 222
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T V + GA++G GG I + Q +G IQ+S+ + PGT +R++ I+GT +
Sbjct: 452 TKKEMEVGEHIVGAILGPGGKGIVELQRFTGTNIQISKKGIYVPGTRNRVVSITGTAGAV 511
Query: 95 LRAVDLVIDKLLTE 108
RA L+ ++ E
Sbjct: 512 ARAQSLIQQRISHE 525
>gi|314122361|ref|NP_001186642.1| RNA-binding protein Nova-1 isoform 2 [Gallus gallus]
gi|114652477|ref|XP_001170656.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Pan troglodytes]
gi|224051380|ref|XP_002200538.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Taeniopygia
guttata]
gi|291403673|ref|XP_002718161.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 2
[Oryctolagus cuniculus]
gi|296214718|ref|XP_002753742.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Callithrix
jacchus]
gi|297694851|ref|XP_002824681.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pongo abelii]
gi|332223199|ref|XP_003260755.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Nomascus
leucogenys]
gi|344273489|ref|XP_003408554.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Loxodonta
africana]
gi|345804243|ref|XP_860979.2| PREDICTED: RNA-binding protein Nova-1 isoform 6 [Canis lupus
familiaris]
gi|395838272|ref|XP_003792041.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Otolemur
garnettii]
gi|410962022|ref|XP_003987576.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Felis catus]
gi|426376606|ref|XP_004055088.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Gorilla
gorilla gorilla]
gi|122064615|sp|Q2PFW9.1|NOVA1_MACFA RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|84579135|dbj|BAE73001.1| hypothetical protein [Macaca fascicularis]
gi|90079349|dbj|BAE89354.1| unnamed protein product [Macaca fascicularis]
gi|380813128|gb|AFE78438.1| RNA-binding protein Nova-1 isoform 2 [Macaca mulatta]
Length = 483
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 109/186 (58%), Gaps = 20/186 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTEL---------------HAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
AV I + + E+ D + ++++IVPNS+ G IIGK
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRI---KQVKIIVPNSTAGLIIGKG 166
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED
Sbjct: 167 GATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGS 225
Query: 201 TMTVPY 206
+ + Y
Sbjct: 226 CLNISY 231
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 389 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 448
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 449 TITGTPAATQAAQYLITQRITYE 471
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 387 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 444
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 445 NRKVTITGTPAATQAAQYLITQRIT 469
>gi|348558005|ref|XP_003464809.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Cavia porcellus]
Length = 483
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 109/186 (58%), Gaps = 20/186 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTEL---------------HAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
AV I + + E+ D + ++++IVPNS+ G IIGK
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRI---KQVKIIVPNSTAGLIIGKG 166
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED
Sbjct: 167 GATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGS 225
Query: 201 TMTVPY 206
+ + Y
Sbjct: 226 CLNISY 231
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 389 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 448
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 449 TITGTPAATQAAQYLITQRITYE 471
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 387 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 444
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 445 NRKVTITGTPAATQAAQYLITQRIT 469
>gi|56549651|ref|NP_006480.2| RNA-binding protein Nova-1 isoform 2 [Homo sapiens]
gi|119586394|gb|EAW65990.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
gi|119586396|gb|EAW65992.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
Length = 483
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 109/186 (58%), Gaps = 20/186 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTEL---------------HAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
AV I + + E+ D + ++++IVPNS+ G IIGK
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRI---KQVKIIVPNSTAGLIIGKG 166
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED
Sbjct: 167 GATVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGS 225
Query: 201 TMTVPY 206
+ + Y
Sbjct: 226 CLNISY 231
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 389 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 448
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 449 TITGTPAATQAAQYLITQRITYE 471
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 387 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 444
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 445 NRKVTITGTPAATQAAQYLITQRIT 469
>gi|301768705|ref|XP_002919771.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 493
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 109/186 (58%), Gaps = 20/186 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 61 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 119
Query: 96 RAVDLVIDKLLTEL---------------HAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
AV I + + E+ D + ++++IVPNS+ G IIGK
Sbjct: 120 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRI---KQVKIIVPNSTAGLIIGKG 176
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED
Sbjct: 177 GATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGS 235
Query: 201 TMTVPY 206
+ + Y
Sbjct: 236 CLNISY 241
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 399 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 458
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 459 TITGTPAATQAAQYLITQRITYE 481
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 397 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 454
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 455 NRKVTITGTPAATQAAQYLITQRIT 479
>gi|392337608|ref|XP_001075246.3| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 560
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 114/201 (56%), Gaps = 14/201 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT + +
Sbjct: 119 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN 178
Query: 96 RAVDLVIDKLLTELHAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGATI 144
A + +K+ A + + V + +LIVPNS+ G IIGK GAT+
Sbjct: 179 AAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATV 238
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S + +
Sbjct: 239 KAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNI 297
Query: 205 PYT-YAG-VFFSGFHGMPYGA 223
Y AG V S G PY +
Sbjct: 298 SYANVAGPVANSNPTGSPYAS 318
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 477 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 536
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 537 AQYLISQRVTYE 548
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 463 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 521
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 522 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 549
>gi|148222190|ref|NP_001086143.1| neuro-oncological ventral antigen 1 [Xenopus laevis]
gi|49258011|gb|AAH74252.1| MGC84002 protein [Xenopus laevis]
Length = 484
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 110/184 (59%), Gaps = 16/184 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTE-------------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
AV I + + E L + + K ++++IVPNS+ G IIGK GA
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK-QVKIIVPNSTAGLIIGKGGA 168
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
T+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED +
Sbjct: 169 TVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIVQKIQEDPQSGSCL 227
Query: 203 TVPY 206
+ Y
Sbjct: 228 NISY 231
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 390 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 449
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 450 TITGTPAATQAAQYLITQRVTYE 472
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 388 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 445
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 446 NRKVTITGTPAATQAAQYLITQRVT 470
>gi|358335626|dbj|GAA29562.2| RNA-binding protein Nova [Clonorchis sinensis]
Length = 673
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 108/181 (59%), Gaps = 7/181 (3%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E + + LV + AGA+IGKGG I D Q+++ A++++S++++F+PGTT+R+ +I GTI
Sbjct: 25 EGNVHFKILVPSIAAGAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVGTI 84
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSIIGKAGATIK 145
D ILR + +K+ + + ++ + G + +++++VPNS+ G IIGK G+ IK
Sbjct: 85 DSILRVFQYISEKIYEKPESILRSTNKGGRMPAERHKQVKILVPNSTAGIIIGKGGSFIK 144
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+ + I++S+ L +R VT+ G L + A++ +L K+++D S +
Sbjct: 145 EVKESTGVFIQVSQKSKE-LNLAERCVTVAGELPQTFEAVKQLLFKIADDPQSSSCPNIS 203
Query: 206 Y 206
Y
Sbjct: 204 Y 204
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P E+ ++ LV N AG +IGKGGS I + + +G IQ+S+ + +R + ++G
Sbjct: 116 PAERHKQVKILVPNSTAGIIIGKGGSFIKEVKESTGVFIQVSQKSKEL-NLAERCVTVAG 174
Query: 90 TIDEILRAVDLVIDKL 105
+ + AV ++ K+
Sbjct: 175 ELPQTFEAVKQLLFKI 190
>gi|332856422|ref|XP_524310.3| PREDICTED: RNA-binding protein Nova-2 [Pan troglodytes]
Length = 607
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 119/212 (56%), Gaps = 17/212 (8%)
Query: 25 SLSSDPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
S+S TE+ Y ++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R
Sbjct: 137 SVSPPKTEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 196
Query: 84 IIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV------------GTKTKLRLIVPNS 131
+ ++ GT E L AV I + + E+ +V + +LIVPNS
Sbjct: 197 VCLVQGTA-EALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNS 255
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K
Sbjct: 256 TAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN-LQERVVTVSGEPEQVHKAVSAIVQK 314
Query: 192 LSEDTLYSQTMTVPYT-YAG-VFFSGFHGMPY 221
+ ED S + + Y AG V S G PY
Sbjct: 315 VQEDPQSSSCLNISYANVAGPVANSNPTGSPY 346
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 524 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 583
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 584 AQYLISQRVTYE 595
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 510 LTAEKLAAES-AKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 568
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 569 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 596
>gi|301786262|ref|XP_002928556.1| PREDICTED: RNA-binding protein Nova-2-like [Ailuropoda melanoleuca]
Length = 329
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 212 ISYANVAGPVANSNPTGSPYAS 233
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 32/190 (16%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V N AG +IGKGG+T+ QSGA +QLS+ E +R++ +SG +++ +A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEPEQVHKA 192
Query: 98 VDLVIDKLLTELHAED--------------QADDVGT-------------KTKLRLIVPN 130
V ++ K+ + + ++ G+ K + + VP
Sbjct: 193 VSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADLAAESAKELVEIAVPE 252
Query: 131 SSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILL 190
+ G+I+GK G T+ + + + A I+IS+ G +R VT+TG+ A LI
Sbjct: 253 NLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLI-- 310
Query: 191 KLSEDTLYSQ 200
S+ Y Q
Sbjct: 311 --SQRVTYEQ 318
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 246 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 299
>gi|403299426|ref|XP_003940488.1| PREDICTED: RNA-binding protein Nova-2 [Saimiri boliviensis
boliviensis]
Length = 508
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 218 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 276
Query: 96 RAVDLVIDKLLTELHAEDQADDV------------GTKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ +V + +LIVPNS+ G IIGK GAT
Sbjct: 277 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 336
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 337 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 395
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 396 ISYANVAGPVANSNPTGSPYAS 417
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P S + P V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT
Sbjct: 410 PTGSPYASPXXXXXXXXIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 469
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTE 108
+R + I+G+ A L+ ++ E
Sbjct: 470 NRRVTITGSPAATQAAQYLISQRVTYE 496
>gi|281348784|gb|EFB24368.1| hypothetical protein PANDA_018514 [Ailuropoda melanoleuca]
Length = 346
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 212 ISYANVAGPVANSNPTGSPYAS 233
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 51/208 (24%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V N AG +IGKGG+T+ QSGA +QLS+ E +R++ +SG +++ +A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEPEQVHKA 192
Query: 98 VDLVIDKLLTE---------------------------------------------LHAE 112
V ++ K+ + L AE
Sbjct: 193 VSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAGAAGGFLTAE 252
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
A + K + + VP + G+I+GK G T+ + + + A I+IS+ G +R V
Sbjct: 253 KLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRV 311
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQ 200
T+TG+ A LI S+ Y Q
Sbjct: 312 TITGSPAATQAAQYLI----SQRVTYEQ 335
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 263 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 316
>gi|392344006|ref|XP_002728759.2| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 576
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 114/201 (56%), Gaps = 14/201 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT + +
Sbjct: 118 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN 177
Query: 96 RAVDLVIDKLLTELHAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGATI 144
A + +K+ A + + V + +LIVPNS+ G IIGK GAT+
Sbjct: 178 AAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATV 237
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S + +
Sbjct: 238 KAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNI 296
Query: 205 PYT-YAG-VFFSGFHGMPYGA 223
Y AG V S G PY +
Sbjct: 297 SYANVAGPVANSNPTGSPYAS 317
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 493 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 546
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 479 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 537
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 538 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 565
>gi|390479167|ref|XP_002762342.2| PREDICTED: RNA-binding protein Nova-2-like [Callithrix jacchus]
Length = 608
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 131 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 189
Query: 96 RAVDLVIDKLLTELHAEDQADDV------------GTKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ +V + +LIVPNS+ G IIGK GAT
Sbjct: 190 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 249
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 250 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 308
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 309 ISYANVAGPVANSNPTGSPYAS 330
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 506 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPTNTQA 565
Query: 97 AVDLVIDKLLTEL 109
A L+ ++ L
Sbjct: 566 AQYLISQRVFQTL 578
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 492 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 550
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
+R VT+TG+ A LI ++ + L+S +
Sbjct: 551 NRRVTITGSPTNTQAAQYLISQRVFQTLLFSMAL 584
>gi|197127216|gb|ACH43714.1| putative neuro-oncological ventral antigen 1-like protein
[Taeniopygia guttata]
Length = 220
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 107/173 (61%), Gaps = 16/173 (9%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTE-------------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
AV I + + E L + + K ++++IVPNS+ G IIGK GA
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK-QVKIIVPNSTAGLIIGKGGA 168
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
T+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED
Sbjct: 169 TVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQED 220
>gi|156368623|ref|XP_001627792.1| predicted protein [Nematostella vectensis]
gi|156214712|gb|EDO35692.1| predicted protein [Nematostella vectensis]
Length = 390
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 123/231 (53%), Gaps = 26/231 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SPD P K + P + P ++ LV N AG++IGKGG I Q +GARI+L
Sbjct: 28 SPDTR-----QPYKRSNFGPAKSP-ILKILVPNYAAGSIIGKGGQNIAQVQQTTGARIKL 81
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD----DVGTKTKLRL 126
S +++++PGT +RI +I G ++ I++ +D VIDK+ E + D ++++
Sbjct: 82 SPNNQYYPGTQERIGLIMGEVENIVQMLDFVIDKIRQEPQGIKASMSISFDRERAKQMKI 141
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALE 186
IVPNS+ G IIGKAG+ IKS + + A I+IS+ D +R+V + G+ ++ A
Sbjct: 142 IVPNSTAGMIIGKAGSAIKSISEQTGARIQISQKDAESVA-GERIVCVGGSQEQVTAACV 200
Query: 187 LILLKLSEDTLYSQTMTVPYT-------------YAGVFFSGFHGMPYGAV 224
+I K+ ED ++ + Y+ AG FS G+P+ A+
Sbjct: 201 IITSKVQEDPEHALNNNIMYSGLTTSRAGHTNGQLAGSAFS--SGLPFSAL 249
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P + +S + + V + L GA++GKGG TI +F SGARIQ+S+ EF PGT+
Sbjct: 293 PTSTATSSSIQSSATLEITVPDELIGAILGKGGKTITEFMQYSGARIQVSQKGEFVPGTS 352
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAE 112
+R ++I+G + A LV + + ++ AE
Sbjct: 353 NRKVVITGDVPAAQLAHFLVTQR-IQQVEAE 382
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
+ + + L + VP+ G+I+GK G TI FM S A I++S+ G ++R V +
Sbjct: 299 SSSIQSSATLEITVPDELIGAILGKGGKTITEFMQYSGARIQVSQKGEFVPGTSNRKVVI 358
Query: 175 TG 176
TG
Sbjct: 359 TG 360
>gi|345785612|ref|XP_855043.2| PREDICTED: RNA-binding protein Nova-2 [Canis lupus familiaris]
Length = 597
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 139 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 197
Query: 96 RAVDLVIDKLLTELHAEDQADDV------------GTKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ +V + +LIVPNS+ G IIGK GAT
Sbjct: 198 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 257
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 258 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 316
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 317 ISYANVAGPVANSNPTGSPYAS 338
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 514 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 573
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 574 AQYLISQRVTYE 585
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 500 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 558
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 559 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 586
>gi|410982764|ref|XP_003997718.1| PREDICTED: RNA-binding protein Nova-2 [Felis catus]
Length = 372
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 116/209 (55%), Gaps = 16/209 (7%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D E +++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++
Sbjct: 35 DGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 94
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDV------------GTKTKLRLIVPNSSCGSI 136
GT E L AV I + + E+ +V + +LIVPNS+ G I
Sbjct: 95 GTA-EALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLI 153
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
IGK GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED
Sbjct: 154 IGKGGATVKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 212
Query: 197 LYSQTMTVPYT-YAG-VFFSGFHGMPYGA 223
S + + Y AG V S G PY +
Sbjct: 213 QSSSCLNISYANVAGPVANSNPTGSPYAS 241
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 289 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 342
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TG+
Sbjct: 286 KELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAA 345
Query: 181 QMRALELILLKLSEDTLYSQ 200
A LI S+ Y Q
Sbjct: 346 TQAAQYLI----SQRVTYEQ 361
>gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens]
Length = 498
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 40 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 98
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 99 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 158
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 159 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 217
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 218 ISYANVAGPVANSNPTGSPYAS 239
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 415 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 468
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 401 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 459
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 460 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 487
>gi|329663502|ref|NP_001193038.1| RNA-binding protein Nova-2 [Bos taurus]
Length = 492
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 212 ISYANVAGPVANSNPTGSPYAS 233
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 395 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 453
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 454 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 481
>gi|5902724|ref|NP_002507.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|33516944|sp|Q9UNW9.1|NOVA2_HUMAN RecName: Full=RNA-binding protein Nova-2; AltName: Full=Astrocytic
NOVA1-like RNA-binding protein; AltName:
Full=Neuro-oncological ventral antigen 2
gi|3851553|gb|AAC72355.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|195934809|gb|AAI68367.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 492
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 212 ISYANVAGPVANSNPTGSPYAS 233
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 395 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 453
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 454 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 481
>gi|291219869|ref|NP_001025048.2| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 492
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 212 ISYANVAGPVANSNPTGSPYAS 233
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 395 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 453
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 454 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 481
>gi|291415485|ref|XP_002723980.1| PREDICTED: neuro-oncological ventral antigen 2 [Oryctolagus
cuniculus]
Length = 492
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 212 ISYANVAGPVANSNPTGSPYAS 233
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 395 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 453
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TG+ A LI ++S
Sbjct: 454 NRRVTITGSPAATQAAQYLISQRVS 478
>gi|225000564|gb|AAI72604.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 583
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 113/200 (56%), Gaps = 16/200 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 125 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 183
Query: 96 RAVDLVIDKLLTELHAEDQADDV------------GTKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ +V + +LIVPNS+ G IIGK GAT
Sbjct: 184 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 243
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 244 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 302
Query: 204 VPYT-YAG-VFFSGFHGMPY 221
+ Y AG V S G PY
Sbjct: 303 ISYANVAGPVANSNPTGSPY 322
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 500 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 559
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 560 AQYLISQRVTYE 571
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 486 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 544
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 545 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 572
>gi|441656325|ref|XP_004093124.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2
[Nomascus leucogenys]
Length = 500
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 68 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 126
Query: 96 RAVDLVIDKLLTELHAEDQADDV------------GTKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ +V + +LIVPNS+ G IIGK GAT
Sbjct: 127 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 186
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 187 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 245
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 246 ISYANVAGPVANSNPTGSPYAS 267
>gi|357602329|gb|EHJ63352.1| hypothetical protein KGM_14186 [Danaus plexippus]
Length = 546
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 12/203 (5%)
Query: 33 KPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
+PTY + LV + +AGA+IGKGG TI Q +GAR+++S+SH+F+PGTT+R +I+G++
Sbjct: 63 EPTYHFKVLVPSMVAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERACLITGSV 122
Query: 92 DEILRAVDLVIDKLLT--EL-----HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+ I+ +D +++K+ EL D +++++VPNS+ G IIGK G I
Sbjct: 123 EGIMVVLDFIMEKIKEKPELVKPFPEGVDAKMPQDRDKQVKILVPNSTAGMIIGKGGNYI 182
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K + S + ++IS+ L +R +T+ G + +A +IL K+ +D V
Sbjct: 183 KQIKEQSGSYVQISQ-KAKELSLQERCITVVGEKENNKKACLMILQKVVDDPQSGSCPNV 241
Query: 205 PYTYAGVFFSGFH--GMPYGAVP 225
Y + ++ G PY AVP
Sbjct: 242 SYADVAGPVANYNPTGSPY-AVP 263
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA++G GG ++ + Q SGA IQ+S+ F PGT +RI+ ISGT I A L+ K
Sbjct: 468 IVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISGTATAISNAHYLIEQK 527
Query: 105 LLTE 108
+ E
Sbjct: 528 IQEE 531
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D G K + +P G+I+G G ++ S A I+IS+ G +R+VT++G
Sbjct: 453 DAGAKDSKNVEIPEVIVGAILGPGGRSLVEIQQMSGANIQISKKGTFAPGTRNRIVTISG 512
Query: 177 TLDEQMRALELILLKLSEDTL 197
T A LI K+ E+ L
Sbjct: 513 TATAISNAHYLIEQKIQEEEL 533
>gi|397493518|ref|XP_003817651.1| PREDICTED: RNA-binding protein Nova-2 [Pan paniscus]
Length = 349
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 115/200 (57%), Gaps = 16/200 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 7 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 65
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 66 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 125
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 126 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 184
Query: 204 VPYT-YAG-VFFSGFHGMPY 221
+ Y AG V S G PY
Sbjct: 185 ISYANVAGPVANSNPTGSPY 204
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 266 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 319
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 252 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 310
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 311 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 338
>gi|395854336|ref|XP_003799652.1| PREDICTED: RNA-binding protein Nova-2, partial [Otolemur garnettii]
Length = 487
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 29 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 87
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 88 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 147
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 148 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 206
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 207 ISYANVAGPVANSNPTGSPYAS 228
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 404 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 457
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 390 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 448
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 449 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 476
>gi|335289843|ref|XP_003127279.2| PREDICTED: RNA-binding protein Nova-2 [Sus scrofa]
Length = 492
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 212 ISYANVAGPVANSNPTGSPYAS 233
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 395 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 453
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 454 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 481
>gi|119577801|gb|EAW57397.1| neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 556
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 98 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 156
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 157 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 216
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 217 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 275
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 276 ISYANVAGPVANSNPTGSPYAS 297
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 473 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 526
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 459 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 517
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 518 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 545
>gi|148691147|gb|EDL23094.1| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 411
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 5 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 63
Query: 96 RAVDLVIDKLLTELHAEDQADDV------------GTKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ +V + +LIVPNS+ G IIGK GAT
Sbjct: 64 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 123
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 124 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 182
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 183 ISYANVAGPVANSNPTGSPYAS 204
>gi|402906002|ref|XP_003915796.1| PREDICTED: RNA-binding protein Nova-2 [Papio anubis]
Length = 618
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 160 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 218
Query: 96 RAVDLVIDKLLTELHAEDQADDV------------GTKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ +V + +LIVPNS+ G IIGK GAT
Sbjct: 219 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 278
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 279 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 337
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 338 ISYANVAGPVANSNPTGSPYAS 359
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 535 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 594
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 595 AQYLISQRVTYE 606
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 521 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 579
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 580 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 607
>gi|296477630|tpg|DAA19745.1| TPA: neuro-oncological ventral antigen 2-like [Bos taurus]
Length = 640
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 182 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 240
Query: 96 RAVDLVIDKLLTELHAEDQADDV------------GTKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ +V + +LIVPNS+ G IIGK GAT
Sbjct: 241 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 300
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 301 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 359
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 360 ISYANVAGPVANSNPTGSPYAS 381
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 557 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 616
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 617 AQYLISQRVTYE 628
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 543 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 601
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 602 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 629
>gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492] [Homo sapiens]
Length = 464
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 6 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 64
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 65 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 124
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 125 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 183
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 184 ISYANVAGPVANSNPTGSPYAS 205
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 381 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 434
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 367 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 425
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 426 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 453
>gi|431909188|gb|ELK12778.1| RNA-binding protein Nova-2 [Pteropus alecto]
Length = 334
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 108/183 (59%), Gaps = 14/183 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPY 206
+ Y
Sbjct: 212 ISY 214
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 39/196 (19%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V N AG +IGKGG+T+ QSGA +QLS+ E +R++ +SG +++ +A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEPEQVHKA 192
Query: 98 VDLVIDKLLTE---------------------------------LHAEDQADDVGTKTKL 124
V ++ K+ + L AE A + K +
Sbjct: 193 VSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTAAAGAAGGFLTAEKLAAE-SAKELV 251
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TG+ A
Sbjct: 252 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 311
Query: 185 LELILLKLSEDTLYSQ 200
LI S+ Y Q
Sbjct: 312 QYLI----SQRVTYEQ 323
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 251 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 304
>gi|118137284|pdb|2ANR|A Chain A, Crystal Structure (Ii) Of Nova-1 Kh1KH2 DOMAIN TANDEM WITH
25NT RNA Hairpin
Length = 178
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 103/171 (60%), Gaps = 12/171 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI+ +
Sbjct: 7 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALN 66
Query: 96 RAVDLVIDKLLTELHAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGATI 144
+ +K+ + + V ++++IVPNS+ G IIGK GAT+
Sbjct: 67 AVHGFIAEKIREXPQNVAKTEPVSILQPQTTVNPDRANQVKIIVPNSTAGLIIGKGGATV 126
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
K+ + S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED
Sbjct: 127 KAIXEQSGAWVQLSQKPDG-INLQNRVVTVSGEPEQNRKAVELIIQKIQED 176
>gi|440907529|gb|ELR57670.1| RNA-binding protein Nova-2, partial [Bos grunniens mutus]
Length = 298
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 108/183 (59%), Gaps = 14/183 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 6 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 64
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 65 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 124
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 125 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 183
Query: 204 VPY 206
+ Y
Sbjct: 184 ISY 186
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V N AG +IGKGG+T+ QSGA +QLS+ E +R++ +SG +++ +A
Sbjct: 106 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEPEQVHKA 164
Query: 98 VDLVIDKLL-------------------------TELHAEDQADDVGTKTKLRLIVPNSS 132
V ++ K+ T L AE A + K + + VP +
Sbjct: 165 VSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGLTAEKLAAE-SAKELVEIAVPENL 223
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
G+I+GK G T+ + + + A I+IS+ G +R VT+TG+
Sbjct: 224 VGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 268
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 215 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 268
>gi|334310485|ref|XP_001369484.2| PREDICTED: RNA-binding protein Nova-1-like [Monodelphis domestica]
Length = 731
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 115/215 (53%), Gaps = 38/215 (17%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S+P + +++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I
Sbjct: 267 SNPEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLI 326
Query: 88 SGTIDEILRAVDLVIDKLLTEL----------------------------------HAED 113
GT+ E L AV I + + E+
Sbjct: 327 QGTV-EALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSS 385
Query: 114 QADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRL 171
+D + T ++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+
Sbjct: 386 PSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERV 444
Query: 172 VTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
VT++G ++ +A+ELI+ K+ ED + + Y
Sbjct: 445 VTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISY 479
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 637 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 696
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 697 TITGTPAATQAAQYLITQRITYE 719
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 383 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 441
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 442 ERVVTVSGEPEQNRKAVELIIQKI 465
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 635 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 692
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 693 NRKVTITGTPAATQAAQYLITQRIT 717
>gi|350646767|emb|CCD58488.1| soluble guanylate cyclase gcy, putative [Schistosoma mansoni]
Length = 1102
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 100/160 (62%), Gaps = 5/160 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV N AGA+IGK G I + Q+GAR+++SR+ +F+PGTT+R+ +I GT++ +
Sbjct: 5 HFKILVPNVAAGAIIGKKGEAIETIKRQTGARLKMSRADDFYPGTTERVCLIIGTLEACI 64
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+ D V+ K + Q + T T ++++VP+S+ G IIGK G I+ ++S A I
Sbjct: 65 QLHDYVMAK----ISKRPQNIAIITPTGVKILVPDSTAGIIIGKFGNFIERIKEESNAFI 120
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++S+ L +R + +TG L E+ +A+E+IL K+ E+
Sbjct: 121 QVSQRPKD-IRLFERCIVITGELKERRKAVEMILYKILEN 159
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
PT ++ LV + AG +IGK G+ I + +S A IQ+S+ + +R I+I+G + E
Sbjct: 86 PTGVKILVPDSTAGIIIGKFGNFIERIKEESNAFIQVSQRPKDI-RLFERCIVITGELKE 144
Query: 94 ILRAVDLVIDKLL 106
+AV++++ K+L
Sbjct: 145 RRKAVEMILYKIL 157
>gi|313229072|emb|CBY18224.1| unnamed protein product [Oikopleura dioica]
gi|313246840|emb|CBY35700.1| unnamed protein product [Oikopleura dioica]
Length = 293
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 120/225 (53%), Gaps = 11/225 (4%)
Query: 2 ETNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQ 61
E N+ S D+ G S++ + L P ++ LV AG++IGK G TI Q
Sbjct: 67 EDNQESKRHQSDISGTTSSSLM--LREKTEAGPLLLKILVPAYAAGSIIGKCGQTITQLQ 124
Query: 62 SQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK 121
SGA I+LS++ +F+PGTT+RI +++G + + +K +D A G +
Sbjct: 125 KDSGAVIKLSKAKDFYPGTTERIGLVTGDAAALKHVYRFMTEKTFEFPVPKDMAIQNGDR 184
Query: 122 TK-LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K ++IVPN++ G IIGKAGATIK M+ + A +++S+ L +R++T+TG E
Sbjct: 185 HKQAKIIVPNTTAGLIIGKAGATIKHIMESTGAKVQLSQKPEQ-INLQERVITVTGEKSE 243
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVP 225
A ++IL K+ ED Q+ + P + +SGF G A P
Sbjct: 244 LYNAGDVILAKIKED---PQSGSCP----NLSYSGFAGPVANANP 281
>gi|170580792|ref|XP_001895410.1| KH domain containing protein [Brugia malayi]
gi|158597654|gb|EDP35742.1| KH domain containing protein [Brugia malayi]
Length = 439
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 126/236 (53%), Gaps = 12/236 (5%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
A K+ S+ + ++ L+ + GA+IGKGG T+ + +S+SG R+Q+S++ E +PGT
Sbjct: 20 ATKKAHVSETEDNMVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGT 79
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD-----DVGTKTKLRLIVPNSSCGS 135
+RI ++ G I +L+ D++++K+ ++ +D + K +++L+VPN+S G
Sbjct: 80 NERICLVKGKIASVLKVSDVILEKIREKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGM 139
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGL--NDRLVTLTGTLDEQ-MRALELILLKL 192
+IGK+GA IK + + A I++ S +R++T+ DE M AL+ +L K+
Sbjct: 140 VIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKV 199
Query: 193 SEDTLYSQTMTVPYTYAGVF--FSG-FHGMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
+ D ++ T+P F SG HGM G + ++ + P GG
Sbjct: 200 AADPQHAMA-TIPDHKDDSFGPASGLLHGMGGGVQGQTIQPFDFSSRSQNAPQFGG 254
>gi|72084060|ref|XP_790705.1| PREDICTED: uncharacterized protein LOC585801 isoform 2
[Strongylocentrotus purpuratus]
Length = 557
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 102/164 (62%), Gaps = 6/164 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L+ + AG++IGKGG TI Q +G ++LS++++F+PGT +R+ +++G ++ +
Sbjct: 79 LKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTGPVESLNN 138
Query: 97 AVDLVIDKLLT--ELHAEDQADDVGTKTKLR---LIVPNSSCGSIIGKAGATIKSFMDDS 151
++DK+ +L + A+ + + + R ++VPNS+ G IIGK GA IKS M+ S
Sbjct: 139 VAVFILDKIKESPQLGVKAGAETITSPERARQVKIVVPNSTAGLIIGKGGAMIKSIMEQS 198
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ ++IS+ L++R++T++G D +A+ I+ K+ ED
Sbjct: 199 GSRVQISQKSDGIT-LSERVITISGESDNNRKAMSFIVNKIQED 241
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
++++DP +K + + V L GA++GKGG T+ +FQ+ +GA+IQ+S+ +E+ PGT +R
Sbjct: 465 TMAADP-QKESILESEVPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEYVPGTRNRR 523
Query: 85 IMISGTIDEILRAVDLVIDKLLTE 108
+ I+G + A L++ +L E
Sbjct: 524 VTITGPVTAAQNAHFLIMQRLAQE 547
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ ++ +V N AG +IGKGG+ I QSG+R+Q+S+ + ++R+I ISG
Sbjct: 166 ERARQVKIVVPNSTAGLIIGKGGAMIKSIMEQSGSRVQISQKSDGIT-LSERVITISGES 224
Query: 92 DEILRAVDLVIDKL 105
D +A+ +++K+
Sbjct: 225 DNNRKAMSFIVNKI 238
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K L++++P+++ GSIIGK G TI D+ +K+S+ + Y G +R+ LTG ++
Sbjct: 76 KYMLKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTGPVES 135
Query: 181 QMRALELILLKLSED 195
IL K+ E
Sbjct: 136 LNNVAVFILDKIKES 150
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
A D ++ L VP + G+I+GK G T+ F + + A I+IS+ + G +R VT+
Sbjct: 467 AADPQKESILESEVPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEYVPGTRNRRVTI 526
Query: 175 TGTLDEQMRALELILLKLSED 195
TG + A LI+ +L+++
Sbjct: 527 TGPVTAAQNAHFLIMQRLAQE 547
>gi|328702094|ref|XP_003241800.1| PREDICTED: hypothetical protein LOC100161431 isoform 2
[Acyrthosiphon pisum]
gi|328702096|ref|XP_001944651.2| PREDICTED: hypothetical protein LOC100161431 isoform 1
[Acyrthosiphon pisum]
Length = 657
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 114/194 (58%), Gaps = 9/194 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE-I 94
+++ L+ AGA+IGKGG TI Q+++ +I++S++++F+PGTT+R+ +ISG+ E I
Sbjct: 197 HMKILIPCITAGAIIGKGGETIAQLQTETNTKIKMSKTNDFYPGTTERVCIISGSSSEHI 256
Query: 95 LRAVDLVIDKLLTELHAEDQADDVG-----TKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ A+ +++++ + A ++ + G + ++++++PNS+ G IIGKAGA IK +
Sbjct: 257 MAALTFIMERIREKPDASNRVQNSGDAIADREKQVKILIPNSTAGMIIGKAGAYIKQLKE 316
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
DS ++IS+ L +R +T++G + + IL K+ ED L + + Y
Sbjct: 317 DSGCFVQISQKAKDTT-LQERCITVSGNTEGNKKVCLCILNKIIEDPLSASCPNLSYADV 375
Query: 210 GVFFSGFH--GMPY 221
+ F+ G PY
Sbjct: 376 NGPVANFNPTGSPY 389
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + GA+IG GG ++ + Q SG I +S+ + PGTT+R + I G+ I A L
Sbjct: 582 VPESIVGAIIGPGGRSLVEIQQMSGVTIHISKKGVYAPGTTNRKVTICGSASGIAMANYL 641
Query: 101 VIDKLLTE 108
+ +++ E
Sbjct: 642 MQQRIVDE 649
>gi|327289205|ref|XP_003229315.1| PREDICTED: RNA-binding protein Nova-1-like [Anolis carolinensis]
Length = 507
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 111/183 (60%), Gaps = 14/183 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 71 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 129
Query: 96 RAVDLVIDKLLTELHAE----DQADDVGTKTKL--------RLIVPNSSCGSIIGKAGAT 143
AV I + + E+ + + + +T + ++IVPNS+ G IIGK GAT
Sbjct: 130 NAVHNFIAEKVREIPQSVVKPESVNILQPQTTMNPDRAKQAKVIVPNSTAGLIIGKGGAT 189
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+++I+ K+ ED S +
Sbjct: 190 VKAIMEQSGAWVQLSQKPEG-INLQERVVTISGEPEQIHKAVDIIVQKIQEDPQSSSCLN 248
Query: 204 VPY 206
+ Y
Sbjct: 249 ISY 251
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+GT
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGT 477
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
TK + + VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TGT
Sbjct: 420 TKDMVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGTPA 479
Query: 180 EQMRALELILLKLSEDTLYSQ 200
A LI S+ Y Q
Sbjct: 480 ATQAAQYLI----SQRVTYEQ 496
>gi|403264854|ref|XP_003924682.1| PREDICTED: RNA-binding protein Nova-1 [Saimiri boliviensis
boliviensis]
Length = 595
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 139 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 197
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 198 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 257
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 258 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 316
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 317 QNRKAVELIIQKIQEDPQSGSCLNISY 343
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 501 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 560
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 561 TITGTPAATQAAQYLITQRITYE 583
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 246 TKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NL 304
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 305 QERVVTVSGEPEQNRKAVELIIQKI 329
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 499 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 556
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 557 NRKVTITGTPAATQAAQYLITQRIT 581
>gi|393909303|gb|EJD75396.1| hypothetical protein LOAG_17442 [Loa loa]
Length = 585
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 125/236 (52%), Gaps = 12/236 (5%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
A K+ SD + ++ L+ + GA+IGKGG T+ + +S+SG R+Q+S++ E +PGT
Sbjct: 42 ATKKAHVSDTEDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGT 101
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD-----DVGTKTKLRLIVPNSSCGS 135
+RI ++ G I +L+ D++++K+ ++ +D + K +++L+VPN+S G
Sbjct: 102 NERICLVKGKIASVLKVSDVILEKIREKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGM 161
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGL--NDRLVTLTGTLDEQ-MRALELILLKL 192
+IGK+GA IK + + A I++ S +R++T+ DE M AL+ +L K+
Sbjct: 162 VIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKV 221
Query: 193 SEDTLYSQTMTVPYTYAGVF--FSG-FHGMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
+ D ++ T+P F SG HG+ G + + + P GG
Sbjct: 222 AADPQHAMA-TIPDHKDDSFGPASGLLHGIGGGVQGQTIQPFDFSNRSQNAPQFGG 276
>gi|312079928|ref|XP_003142383.1| hypothetical protein LOAG_06799 [Loa loa]
Length = 440
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 125/236 (52%), Gaps = 12/236 (5%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
A K+ SD + ++ L+ + GA+IGKGG T+ + +S+SG R+Q+S++ E +PGT
Sbjct: 20 ATKKAHVSDTEDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGT 79
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD-----DVGTKTKLRLIVPNSSCGS 135
+RI ++ G I +L+ D++++K+ ++ +D + K +++L+VPN+S G
Sbjct: 80 NERICLVKGKIASVLKVSDVILEKIREKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGM 139
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGL--NDRLVTLTGTLDEQ-MRALELILLKL 192
+IGK+GA IK + + A I++ S +R++T+ DE M AL+ +L K+
Sbjct: 140 VIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKV 199
Query: 193 SEDTLYSQTMTVPYTYAGVF--FSG-FHGMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
+ D ++ T+P F SG HG+ G + + + P GG
Sbjct: 200 AADPQHAMA-TIPDHKDDSFGPASGLLHGIGGGVQGQTIQPFDFSNRSQNAPQFGG 254
>gi|256017197|ref|NP_067336.1| RNA-binding protein Nova-1 [Mus musculus]
gi|122065708|sp|Q9JKN6.2|NOVA1_MOUSE RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|148704854|gb|EDL36801.1| mCG140771, isoform CRA_b [Mus musculus]
gi|149051188|gb|EDM03361.1| neuro-oncological ventral antigen 1, isoform CRA_b [Rattus
norvegicus]
Length = 507
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 109
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 228
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 229 QNRKAVELIIQKIQEDPQSGSCLNISY 255
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 413 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 472
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 473 TITGTPAATQAAQYLITQRITYE 495
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 159 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 217
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 218 ERVVTVSGEPEQNRKAVELIIQKI 241
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 411 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 468
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 469 NRKVTITGTPAATQAAQYLITQRIT 493
>gi|7025507|gb|AAF35907.1|AF232828_1 ventral neuron-specific protein 1 NOVA1 [Mus musculus]
Length = 493
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 37 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 95
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 96 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 155
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 156 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 214
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 215 QNRKAVELIIQKIQEDPQSGSCLNISY 241
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 399 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 458
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 459 TITGTPAATQAAQYLITQRITYE 481
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 145 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 203
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 204 ERVVTVSGEPEQNRKAVELIIQKI 227
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 397 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 454
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 455 NRKVTITGTPAATQAAQYLITQRIT 479
>gi|156717598|ref|NP_001096339.1| neuro-oncological ventral antigen 1 [Xenopus (Silurana) tropicalis]
gi|134023955|gb|AAI35782.1| LOC100124925 protein [Xenopus (Silurana) tropicalis]
Length = 508
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 40/224 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTEL---------------------------------HAEDQADD---VG 119
AV I + + E+ + D +
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLSSLPPATKSSPSDPMTIS 169
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 170 RASQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 228
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
+ +A+ELI+ K+ ED + + Y V S G PY
Sbjct: 229 QNRKAVELIVQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPY 272
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 414 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 473
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 474 TITGTPAATQAAQYLITQRVTYE 496
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP + + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 159 KSSPSDPMTISRASQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQ 217
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L++ K+
Sbjct: 218 ERVVTVSGEPEQNRKAVELIVQKI 241
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 412 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 469
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 470 NRKVTITGTPAATQAAQYLITQRVT 494
>gi|402594254|gb|EJW88180.1| hypothetical protein WUBG_00913 [Wuchereria bancrofti]
Length = 407
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 120/220 (54%), Gaps = 12/220 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L+ + GA+IGKGG T+ + +S+SG R+Q+S++ E +PGT +RI ++ G I +L+
Sbjct: 4 VKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVLK 63
Query: 97 AVDLVIDKLLTELHAEDQAD-----DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
D++++K+ ++ +D + K +++L+VPN+S G +IGK+GA IK + +
Sbjct: 64 VSDVILEKIREKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQT 123
Query: 152 QAVIKISRLDHSYYGL--NDRLVTLTGTLDEQ-MRALELILLKLSEDTLYSQTMTVPYTY 208
A I++ S +R++T+ DE M AL+ +L K++ D ++ T+P
Sbjct: 124 GANIQVYPKAGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKVAADPQHAMA-TIPDHK 182
Query: 209 AGVF--FSG-FHGMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
F SG HGM G + ++ + P GG
Sbjct: 183 DDSFGPASGLLHGMGGGVQGQTIQPFDFSSRSQNAPQFGG 222
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 46/72 (63%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
++++++P+++ G++IGK G T+++ +S +++S+ Y G N+R+ + G + +
Sbjct: 3 QVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVL 62
Query: 183 RALELILLKLSE 194
+ ++IL K+ E
Sbjct: 63 KVSDVILEKIRE 74
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL--SRSHEFFPGTTDRIIMISG 89
E+ ++ +V N AG VIGK G+ I + + Q+GA IQ+ + + +RII I+
Sbjct: 91 ERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAA 150
Query: 90 TIDEILR-AVDLVIDKLLTE 108
DE+L A+ V++K+ +
Sbjct: 151 EQDEVLMDALQRVLEKVAAD 170
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 106/172 (61%), Gaps = 14/172 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ G+ + +L
Sbjct: 35 FLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAESLL 94
Query: 96 RAVDLVIDKLLTELHAEDQADDVGT------------KTKLRLIVPNSSCGSIIGKAGAT 143
+ + +K + E+ +D+G + +LIVPN++ G IIGK GAT
Sbjct: 95 SVHNFIAEK-VREVPQGGTKNDLGVLLPPQTTINAERAKQAKLIVPNTTAGLIIGKGGAT 153
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++S M++S A +++S+ + L++R+VT++G + +A+ I+ K ED
Sbjct: 154 VRSIMEESGAWVQLSQ-KPAGPNLHERVVTVSGEPSQVQKAIRSIIHKSRED 204
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT R + I+G
Sbjct: 330 LEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITG 382
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+ + +V N AG +IGKGG+T+ +SGA +QLS+ P +R++ +SG
Sbjct: 129 ERAKQAKLIVPNTTAGLIIGKGGATVRSIMEESGAWVQLSQ-KPAGPNLHERVVTVSGEP 187
Query: 92 DEILRAVDLVIDK 104
++ +A+ +I K
Sbjct: 188 SQVQKAIRSIIHK 200
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
A+ V K L + VP + G+I+GK G T+ + + + A I+IS+ G R VT+
Sbjct: 321 AESVTGKETLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTI 380
Query: 175 TG 176
TG
Sbjct: 381 TG 382
>gi|444728868|gb|ELW69310.1| RNA-binding protein Nova-1 [Tupaia chinensis]
Length = 482
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 25 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 83
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 84 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 143
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 144 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 202
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 203 QNRKAVELIIQKIQEDPQSGSCLNISY 229
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 388 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 447
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 448 TITGTPAATQAAQYLITQRITYE 470
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 133 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 191
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 192 ERVVTVSGEPEQNRKAVELIIQKI 215
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 386 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 443
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 444 NRKVTITGTPAATQAAQYLITQRIT 468
>gi|242019024|ref|XP_002429966.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212515021|gb|EEB17228.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 319
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 109/181 (60%), Gaps = 10/181 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV AGA+IGKGG TI Q +GAR+++S++++F+P TT+R+ +++G+++ I+
Sbjct: 69 HLKILVPCIAAGAIIGKGGETIAQLQKDTGARMKMSKANDFYPCTTERVCLVTGSVEAIM 128
Query: 96 RAVDLVIDKLLTELHAEDQADDVG-TKTKL--------RLIVPNSSCGSIIGKAGATIKS 146
+ ++DK+ + +A + T++KL ++++PNS+ G IIGK G IK
Sbjct: 129 AVMSFIMDKIKEKPDLTSKAINTSDTESKLSADRSKQVKILIPNSTAGMIIGKGGNYIKQ 188
Query: 147 FMDDSQAVIKIS-RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++S + I++S + + + L +R VT+ G ++ +A+ +L K+ ED + V
Sbjct: 189 MKEESGSYIQLSQKSNDASLQLQERCVTIIGEMENNKKAILKLLAKVVEDPQSGSCLNVS 248
Query: 206 Y 206
Y
Sbjct: 249 Y 249
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 12 PDVHGKR-STAPVKS-LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
PD+ K +T+ +S LS+D +++ ++ L+ N AG +IGKGG+ I + +SG+ IQ
Sbjct: 142 PDLTSKAINTSDTESKLSADRSKQ---VKILIPNSTAGMIIGKGGNYIKQMKEESGSYIQ 198
Query: 70 LS-RSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
LS +S++ +R + I G ++ +A+ ++ K++ +
Sbjct: 199 LSQKSNDASLQLQERCVTIIGEMENNKKAILKLLAKVVED 238
>gi|348558003|ref|XP_003464808.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Cavia porcellus]
Length = 507
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 228
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 229 QNRKAVELIIQKIQEDPQSGSCLNISY 255
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 413 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 472
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 473 TITGTPAATQAAQYLITQRITYE 495
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 159 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 217
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 218 ERVVTVSGEPEQNRKAVELIIQKI 241
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 411 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 468
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 469 NRKVTITGTPAATQAAQYLITQRIT 493
>gi|355693195|gb|EHH27798.1| hypothetical protein EGK_18083, partial [Macaca mulatta]
Length = 488
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 32 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 90
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 91 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 150
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 151 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 209
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 210 QNRKAVELIIQKIQEDPQSGSCLNISY 236
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 394 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 453
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 454 TITGTPAATQAAQYLITQRITYE 476
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 140 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 198
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 199 ERVVTVSGEPEQNRKAVELIIQKI 222
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 392 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 449
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 450 NRKVTITGTPAATQAAQYLITQRIT 474
>gi|314122254|ref|NP_001186641.1| RNA-binding protein Nova-1 isoform 1 [Gallus gallus]
gi|387763164|ref|NP_001248729.1| RNA-binding protein Nova-1 [Macaca mulatta]
gi|57090475|ref|XP_547754.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Canis lupus
familiaris]
gi|114652475|ref|XP_001170675.1| PREDICTED: RNA-binding protein Nova-1 isoform 3 [Pan troglodytes]
gi|224051378|ref|XP_002200539.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Taeniopygia
guttata]
gi|291403671|ref|XP_002718160.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 1
[Oryctolagus cuniculus]
gi|296214716|ref|XP_002753741.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Callithrix
jacchus]
gi|297694849|ref|XP_002824680.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Pongo abelii]
gi|332223197|ref|XP_003260754.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Nomascus
leucogenys]
gi|344273491|ref|XP_003408555.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Loxodonta
africana]
gi|395838270|ref|XP_003792040.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Otolemur
garnettii]
gi|402875871|ref|XP_003901717.1| PREDICTED: RNA-binding protein Nova-1-like [Papio anubis]
gi|410962020|ref|XP_003987575.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Felis catus]
gi|426376604|ref|XP_004055087.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Gorilla
gorilla gorilla]
gi|355778493|gb|EHH63529.1| hypothetical protein EGM_16516 [Macaca fascicularis]
gi|380813130|gb|AFE78439.1| RNA-binding protein Nova-1 isoform 1 [Macaca mulatta]
gi|410293724|gb|JAA25462.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
gi|410353659|gb|JAA43433.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
Length = 507
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 228
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 229 QNRKAVELIIQKIQEDPQSGSCLNISY 255
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 413 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 472
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 473 TITGTPAATQAAQYLITQRITYE 495
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 159 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 217
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 218 ERVVTVSGEPEQNRKAVELIIQKI 241
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 411 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 468
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 469 NRKVTITGTPAATQAAQYLITQRIT 493
>gi|326920695|ref|XP_003206604.1| PREDICTED: RNA-binding protein Nova-1-like [Meleagris gallopavo]
Length = 520
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 64 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 122
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 123 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 182
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 183 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 241
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 242 QNRKAVELIIQKIQEDPQSGSCLNISY 268
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 426 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 485
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 486 TITGTPAATQAAQYLITQRITYE 508
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 172 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 230
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 231 ERVVTVSGEPEQNRKAVELIIQKI 254
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 424 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 481
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 482 NRKVTITGTPAATQAAQYLITQRIT 506
>gi|56549653|ref|NP_002506.2| RNA-binding protein Nova-1 isoform 1 [Homo sapiens]
gi|50959950|gb|AAH75039.1| Neuro-oncological ventral antigen 1 [Homo sapiens]
gi|50960205|gb|AAH75038.1| Neuro-oncological ventral antigen 1 [Homo sapiens]
gi|119586397|gb|EAW65993.1| neuro-oncological ventral antigen 1, isoform CRA_c [Homo sapiens]
gi|119586399|gb|EAW65995.1| neuro-oncological ventral antigen 1, isoform CRA_c [Homo sapiens]
gi|158255480|dbj|BAF83711.1| unnamed protein product [Homo sapiens]
Length = 507
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 228
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 229 QNRKAVELIIQKIQEDPQSGSCLNISY 255
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 413 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 472
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 473 TITGTPAATQAAQYLITQRITYE 495
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 159 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQ 217
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 218 ERVVTVSGEPEQNRKAVELIIQKI 241
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 411 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 468
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 469 NRKVTITGTPAATQAAQYLITQRIT 493
>gi|85838458|gb|ABC86135.1| nova [Paracentrotus lividus]
Length = 553
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 107/177 (60%), Gaps = 7/177 (3%)
Query: 25 SLSSDPTEKPTYI-RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
+L P + YI + L+ + AG++IGKGG TI Q +G ++LS++++F+PGT +R
Sbjct: 63 NLGPGPVDDNKYILKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQER 122
Query: 84 IIMISGTIDEILRAVDLVIDKLLT--ELHAEDQADDVGTKTKLR---LIVPNSSCGSIIG 138
+ +++G ++ + V++K+ +L + A+ + + + R ++VPNS+ G IIG
Sbjct: 123 VALLTGPVESLNNVAVFVLEKIKESPQLGVKAGAETITSPERARQVKIVVPNSTAGLIIG 182
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
K GA IKS M+ S + ++IS+ L++R++T++G + +A+ I+ K+ ED
Sbjct: 183 KGGAMIKSIMEQSGSRVQISQKSDGIT-LSERVITISGEPENNRKAMSFIVNKIQED 238
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
++++DP +K + + V L GA++GKGG T+ +FQ+ +GA+IQ+S+ +E+ PGT +R
Sbjct: 461 TMAADP-QKESILESEVPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEYVPGTRNRR 519
Query: 85 IMISGTIDEILRAVDLVIDKLLTE 108
+ I+G + A L++ +L E
Sbjct: 520 VTITGPVTAAQNAHFLIMQRLAQE 543
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
A D ++ L VP + G+I+GK G T+ F + + A I+IS+ + G +R VT+
Sbjct: 463 AADPQKESILESEVPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEYVPGTRNRRVTI 522
Query: 175 TGTLDEQMRALELILLKLSED 195
TG + A LI+ +L+++
Sbjct: 523 TGPVTAAQNAHFLIMQRLAQE 543
>gi|158256368|dbj|BAF84157.1| unnamed protein product [Homo sapiens]
Length = 507
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 228
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 229 QNRKAVELIIQKIQEDPQSGSCLNISY 255
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 413 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 472
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 473 TITGTPAATQAAQYLITQRITYE 495
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 159 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQ 217
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 218 ERVVTVSGEPEQNRKAVELIIQKI 241
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 411 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 468
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 469 NRKVTITGTPAATQAAQYLITQRIT 493
>gi|397475477|ref|XP_003809165.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Pan paniscus]
Length = 470
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 14 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 72
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 73 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 132
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 133 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 191
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 192 QNRKAVELIIQKIQEDPQSGSCLNISY 218
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 376 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 435
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 436 TITGTPAATQAAQYLITQRITYE 458
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 122 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 180
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 181 ERVVTVSGEPEQNRKAVELIIQKI 204
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 374 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 431
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 432 NRKVTITGTPAATQAAQYLITQRIT 456
>gi|380806987|gb|AFE75369.1| RNA-binding protein Nova-2, partial [Macaca mulatta]
Length = 296
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 109/191 (57%), Gaps = 16/191 (8%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L AV I + +
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EALNAVHSFIAEKV 59
Query: 107 TEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
E+ A + + V + +LIVPNS+ G IIGK GAT+K+ M+ S A
Sbjct: 60 REIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAW 119
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT-YAG-VF 212
+++S+ L +R+VT++G ++ +A+ I+ K+ ED S + + Y AG V
Sbjct: 120 VQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVA 178
Query: 213 FSGFHGMPYGA 223
S G PY +
Sbjct: 179 NSNPTGSPYAS 189
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V N AG +IGKGG+T+ QSGA +QLS+ E +R++ +SG +++ +A
Sbjct: 90 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEPEQVHKA 148
Query: 98 VDLVIDKL 105
V ++ K+
Sbjct: 149 VSAIVQKV 156
>gi|301768703|ref|XP_002919770.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Ailuropoda
melanoleuca]
Length = 517
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 61 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 119
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 120 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 179
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 180 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 238
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 239 QNRKAVELIIQKIQEDPQSGSCLNISY 265
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 423 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 482
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 483 TITGTPAATQAAQYLITQRITYE 505
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 169 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 227
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 228 ERVVTVSGEPEQNRKAVELIIQKI 251
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 421 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 478
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 479 NRKVTITGTPAATQAAQYLITQRIT 503
>gi|397475479|ref|XP_003809166.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pan paniscus]
Length = 466
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 10 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 68
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 69 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 128
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 129 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 187
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 188 QNRKAVELIIQKIQEDPQSGSCLNISY 214
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 372 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 431
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 432 TITGTPAATQAAQYLITQRITYE 454
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 118 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 176
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 177 ERVVTVSGEPEQNRKAVELIIQKI 200
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 370 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 427
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 428 NRKVTITGTPAATQAAQYLITQRIT 452
>gi|395503649|ref|XP_003756176.1| PREDICTED: RNA-binding protein Nova-1-like [Sarcophilus harrisii]
Length = 488
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 32 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 90
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 91 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 150
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 151 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 209
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 210 QNRKAVELIIQKIQEDPQSGSCLNISY 236
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 394 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 453
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 454 TITGTPAATQAAQYLITQRITYE 476
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 140 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 198
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 199 ERVVTVSGEPEQNRKAVELIIQKI 222
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 392 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 449
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 450 NRKVTITGTPAATQAAQYLITQRIT 474
>gi|327259393|ref|XP_003214522.1| PREDICTED: RNA-binding protein Nova-1-like [Anolis carolinensis]
Length = 508
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 129/271 (47%), Gaps = 41/271 (15%)
Query: 14 VHGKRSTAPVKSLSSDPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
+H ++S ++ E Y ++ L+ + AG++IGKGG TI Q ++GA I+LS+
Sbjct: 29 IHQRKSKKSTHAMRLQLAEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 88
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL----------------------- 109
S +F+PGTT+R+ +I GT+ E L AV I + + E+
Sbjct: 89 SKDFYPGTTERVCLIQGTV-EALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 147
Query: 110 -----------HAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+D + T ++++IVPNS+ G IIGK GAT+K+ M+ S A ++
Sbjct: 148 IKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQ 207
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG--VFFS 214
+S+ L +R+VT++G ++ +A+ELI+ K+ ED + + Y V S
Sbjct: 208 LSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANS 266
Query: 215 GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGG 245
G PY +P N+ G
Sbjct: 267 NPTGSPYANTAEVLPTAAAAAGLLGHANLAG 297
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 414 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 473
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 474 TITGTPAATQAAQYLITQRITYE 496
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 412 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 469
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 470 NRKVTITGTPAATQAAQYLITQRIT 494
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 119/208 (57%), Gaps = 19/208 (9%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ G+ + +L
Sbjct: 35 FLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAEALL 94
Query: 96 RAVDLVIDKLLTELHAEDQADDVGT------------KTKLRLIVPNSSCGSIIGKAGAT 143
+ + +K + E+ +D+G + +LIVPN++ G IIGK GAT
Sbjct: 95 SVHNFIAEK-VREVPQGAPKNDLGVLLPPQSTINAERAKQAKLIVPNTTAGLIIGKGGAT 153
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQT-M 202
+++ M++S A +++S+ + L++R+VT++G + +A+ I+ K ED T +
Sbjct: 154 VRNIMEESGAWVQLSQ-KPAGSNLHERVVTVSGEPSQVQKAIHSIIHKSREDPPQGTTHL 212
Query: 203 TVPY--TYAGVFFSGFHGMPY--GAVPP 226
+ Y T V S G PY GA P
Sbjct: 213 NISYINTQGPVANSNPTGSPYAGGAAEP 240
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT R + I+G
Sbjct: 330 LEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITG 382
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT---DRIIMIS 88
E+ + +V N AG +IGKGG+T+ + +SGA +QLS+ P + +R++ +S
Sbjct: 129 ERAKQAKLIVPNTTAGLIIGKGGATVRNIMEESGAWVQLSQK----PAGSNLHERVVTVS 184
Query: 89 GTIDEILRAVDLVIDK 104
G ++ +A+ +I K
Sbjct: 185 GEPSQVQKAIHSIIHK 200
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
A+ V K L + VP + G+I+GK G T+ + + + A I+IS+ G R VT+
Sbjct: 321 AESVTGKETLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTI 380
Query: 175 TG 176
TG
Sbjct: 381 TG 382
>gi|354471632|ref|XP_003498045.1| PREDICTED: RNA-binding protein Nova-1 [Cricetulus griseus]
Length = 493
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 37 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 95
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 96 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 155
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 156 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 214
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 215 QNRKAVELIIQKIQEDPQSGSCLNISY 241
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 399 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 458
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 459 TITGTPAATQAAQYLITQRITYE 481
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 145 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 203
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 204 ERVVTVSGEPEQNRKAVELIIQKI 227
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 397 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 454
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 455 NRKVTITGTPAATQAAQYLITQRIT 479
>gi|47216835|emb|CAG02726.1| unnamed protein product [Tetraodon nigroviridis]
Length = 457
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 115/213 (53%), Gaps = 28/213 (13%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--------------GTT 81
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+P GTT
Sbjct: 6 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPAFVMFESPEEKFTEGTT 65
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG-----------TKTKLRLIVPN 130
+R+ +I GT++ + + + +K+ + + + V + ++IVPN
Sbjct: 66 ERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKIIVPN 125
Query: 131 SSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILL 190
S+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+E+I+
Sbjct: 126 STAGLIIGKGGATVKAVMEQSGAWVQLSQKPEG-INLQERVVTISGEPEQNRKAVEIIVQ 184
Query: 191 KLSEDTLYSQTMTVPYTYAG--VFFSGFHGMPY 221
K+ ED S + + Y+ V S G PY
Sbjct: 185 KIQEDPQSSSCLNISYSNVSGPVANSNPTGSPY 217
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 374 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 433
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 434 AQYLISQRITYE 445
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E AD G K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 361 LATEKLAD--GAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTR 418
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TG+ A LI +++
Sbjct: 419 NRKVTITGSPAATQAAQYLISQRIT 443
>gi|351697928|gb|EHB00847.1| RNA-binding protein Nova-2 [Heterocephalus glaber]
Length = 320
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 105/173 (60%), Gaps = 14/173 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 27 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 85
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 86 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 145
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ KL+ ++
Sbjct: 146 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKLAAES 197
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V N AG +IGKGG+T+ QSGA +QLS+ E +R++ +SG +++ +A
Sbjct: 127 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEPEQVHKA 185
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
V ++ KL E K + + VP + G+I+GK G T+ + + + A I+I
Sbjct: 186 VSAIVQKLAAE----------SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 235
Query: 158 SRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
S+ G +R VT+TG+ A LI +++ + QT+
Sbjct: 236 SKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYEQGVFQTL 280
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS 71
P+ K +A V+ L+++ ++ + V L GA++GKGG T+ ++Q +GARIQ+S
Sbjct: 179 PEQVHKAVSAIVQKLAAESAKE--LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQIS 236
Query: 72 RSHEFFPGTTDRIIMISGT 90
+ EF PGT +R + I+G+
Sbjct: 237 KKGEFLPGTRNRRVTITGS 255
>gi|432101641|gb|ELK29690.1| RNA-binding protein Nova-2 [Myotis davidii]
Length = 294
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 108/182 (59%), Gaps = 14/182 (7%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
+ + E +++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +
Sbjct: 33 ARNAEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL 92
Query: 87 ISGTIDEILRAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCG 134
+ GT E L AV I + + E+ A + + V + +LIVPNS+ G
Sbjct: 93 VQGT-AEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAG 151
Query: 135 SIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IIGK GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ KL+
Sbjct: 152 LIIGKGGATVKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKLAA 210
Query: 195 DT 196
++
Sbjct: 211 ES 212
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V N AG +IGKGG+T+ QSGA +QLS+ E +R++ +SG +++ +A
Sbjct: 142 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEPEQVHKA 200
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
V ++ KL E K + + VP + G+I+GK G T+ + + + A I+I
Sbjct: 201 VSAIVQKLAAE----------SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 250
Query: 158 SRLDHSYYGLNDR 170
S+ G +R
Sbjct: 251 SKKGEFLPGTRNR 263
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS 71
P+ K +A V+ L+++ ++ + V L GA++GKGG T+ ++Q +GARIQ+S
Sbjct: 194 PEQVHKAVSAIVQKLAAESAKE--LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQIS 251
Query: 72 RSHEFFPGTTDR 83
+ EF PGT +R
Sbjct: 252 KKGEFLPGTRNR 263
>gi|224008600|ref|XP_002293259.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971385|gb|EED89720.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 296
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 118/215 (54%), Gaps = 17/215 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T I+ LVSN +G +IG+ G TI++ Q+ S RI+LS+ +++PGT DR+ +I G++D
Sbjct: 1 TAIKLLVSNNSSGCIIGRSGKTISELQADSSTRIKLSQGGDYYPGTQDRVCLIQGSLDNA 60
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ-A 153
AV++++ KLL ++ V ++++VP SCG +IG+ G+ IKS ++S +
Sbjct: 61 RVAVEMILLKLLQVESIVNEFGSVAMPFTIQVLVPTPSCGMLIGRGGSNIKSIKEESGVS 120
Query: 154 VIKISRLDH----------SYYGLN------DRLVTLTGTLDEQMRALELILLKLSEDTL 197
I++S+ + S +N +R++T++G + ++ + LIL +++ +
Sbjct: 121 FIQLSQKEQDNNHTANAIMSNTAINTAATTSERIITISGCFESCVKCVLLILEEMASNPE 180
Query: 198 YSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
S+ M + +Y+ V + + PP + P
Sbjct: 181 VSRYMNMTTSYSKVVAAQQSAATAQSSHPPSLSAP 215
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 43/205 (20%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR-IQLSRSHE----------------F 76
P I+ LV P G +IG+GGS I + +SG IQLS+ +
Sbjct: 87 PFTIQVLVPTPSCGMLIGRGGSNIKSIKEESGVSFIQLSQKEQDNNHTANAIMSNTAINT 146
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK------------- 123
T++RII ISG + ++ V L+++++ + + + +K
Sbjct: 147 AATTSERIITISGCFESCVKCVLLILEEMASNPEVSRYMNMTTSYSKVVAAQQSAATAQS 206
Query: 124 ------------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRL 171
++ +P S G ++G+ G T+ + SQ I++S+ G N R+
Sbjct: 207 SHPPSLSAPTHSIQFGIPESMVGFVLGRRGKTLTQLQEQSQTRIRLSQRGVFLPGTNQRV 266
Query: 172 VTLTGTLDEQM-RALELILLKLSED 195
+T+TG E + A LI +LSE
Sbjct: 267 LTITGNTAEHVANAQYLINQRLSEK 291
>gi|256089056|ref|XP_002580633.1| soluble guanylate cyclase gcy [Schistosoma mansoni]
Length = 1553
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 100/165 (60%), Gaps = 6/165 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+ + LV N AGA+IGK G I + Q+GAR+++SR+ +F+PGTT+R+ +I GT++ +
Sbjct: 5 HFKILVPNVAAGAIIGKKGEAIETIKRQTGARLKMSRADDFYPGTTERVCLIIGTLEACI 64
Query: 96 RAVDLVIDKLLTE-----LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+ D V+ K+ + + + +++++VP+S+ G IIGK G I+ ++
Sbjct: 65 QLHDYVMAKISKRPQNIAIITPTGVNCMERHKQVKILVPDSTAGIIIGKFGNFIERIKEE 124
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A I++S+ L +R + +TG L E+ +A+E+IL K+ E+
Sbjct: 125 SNAFIQVSQRPKD-IRLFERCIVITGELKERRKAVEMILYKILEN 168
>gi|355707685|gb|AES03033.1| neuro-oncological ventral antigen 2 [Mustela putorius furo]
Length = 171
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 101/168 (60%), Gaps = 14/168 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 6 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 64
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVGT-----------KTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 65 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 124
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K
Sbjct: 125 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQK 171
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 66
Query: 184 ALELILLKLSEDTLYSQTMTVP 205
I K+ E Q MT P
Sbjct: 67 VHSFIAEKVRE---IPQAMTKP 85
>gi|1709303|sp|P51513.1|NOVA1_HUMAN RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Onconeural ventral antigen 1; AltName:
Full=Paraneoplastic Ri antigen; AltName: Full=Ventral
neuron-specific protein 1
gi|440878|gb|AAA16022.1| onconeural ventral antigen-1 [Homo sapiens]
Length = 510
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 41/210 (19%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR---SHEFFPGTTDRIIMISGTID 92
+++ L+ + AG++IGKGG TI Q ++GA I+LS+ S +F+PGTT+R+ +I GT+
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTV- 109
Query: 93 EILRAVDLVIDKLLTEL----------------------------------HAEDQADDV 118
E L AV I + + E+ +D +
Sbjct: 110 EALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPM 169
Query: 119 GTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
T ++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G
Sbjct: 170 TTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSG 228
Query: 177 TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++ +A+ELI+ K+ ED + + Y
Sbjct: 229 EPEQNRKAVELIIQKIQEDPQSGSCLNISY 258
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 416 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 475
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 476 TITGTPAATQAAQYLITQRITYE 498
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 162 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQ 220
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 221 ERVVTVSGEPEQNRKAVELIIQKI 244
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 414 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 471
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 472 NRKVTITGTPAATQAAQYLITQRIT 496
>gi|358342542|dbj|GAA49985.1| RNA-binding protein Nova [Clonorchis sinensis]
Length = 820
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 56/226 (24%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ LV + GA+IGKGG +I Q ++GARI+LS+ ++F+PGT +R+ +I GT+D + R
Sbjct: 1 MKILVPSGAVGAIIGKGGESIAHVQWETGARIKLSKPNDFYPGTMERVCLIQGTLDGVTR 60
Query: 97 AVDLVIDKLL----------------------------------------TELHAEDQAD 116
+ ++D++L + + QAD
Sbjct: 61 MHNYIMDRMLEKPECAGATGGQTLPGSTSLACPVRPTTGGAIIPTTVGNPSTISTTGQAD 120
Query: 117 ---------------DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
G +++++VPN + G +IGK G+ +K D + A I+IS+
Sbjct: 121 FGASGAWPTVGGSRLPWGRHQQVKILVPNCTAGLVIGKVGSYVKEIKDRTGAFIQISQKS 180
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT 207
+ L +R +T+ G D+ A+ L+L K++ED + T+ Y+
Sbjct: 181 KE-FNLMERCITIAGEPDQCRAAVALVLAKIAEDPQSTSCPTISYS 225
>gi|358334721|dbj|GAA27863.2| RNA-binding protein Nova [Clonorchis sinensis]
Length = 759
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 98/165 (59%), Gaps = 6/165 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AGAVIGK G I Q + ++++S+ EF+PGTT+R+ +I G+++ ++
Sbjct: 39 HLKVLIPSIAAGAVIGKYGEAIGKIQKDTNTKVKISKQDEFYPGTTERVCLIVGSMEGVM 98
Query: 96 RAVDLVIDKLLTELHAEDQAD-----DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+ ++D++L + A +V +++++VPNS+ G +IGK G+ I+ +
Sbjct: 99 SVHNYIMDRILEKPDPNPHATCEGRLNVERHKQVKILVPNSTAGMVIGKGGSYIQEIKEK 158
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ A ++IS+ + L +R + + G LD+ A++LIL ++ D
Sbjct: 159 TGAYVQISQKSRE-FNLLERCIIIAGDLDQTRAAVQLILAVIAAD 202
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G ++G G +I D Q+ SG IQ+S+ + PGT +R++ I+G + A +++ ++
Sbjct: 612 GLLLGPQGRSIVDLQASSGTVIQVSQKGVYAPGTQNRLVTITGPQLNVQWAANVIEQRVA 671
Query: 107 TE 108
E
Sbjct: 672 VE 673
>gi|124808479|ref|XP_001348324.1| RNA-binding protein Nova-1, putative [Plasmodium falciparum 3D7]
gi|23497216|gb|AAN36763.1| RNA-binding protein Nova-1, putative [Plasmodium falciparum 3D7]
Length = 337
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 95/149 (63%), Gaps = 7/149 (4%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
+++ L++N +AG+VIGK GS I ++++G ++LS ++ +FP T +R++++ G ID+I
Sbjct: 19 CFVKLLINNLVAGSVIGKHGSIITSIENKTGCSLKLSPNNSYFPNTQERVLVLCGKIDQI 78
Query: 95 LRAVDLVIDKL--LTELHAEDQAD--DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
A+ +++DK+ + H+ ++ + + K R++VP S+ +IIGK G IK D
Sbjct: 79 KDALLIILDKIKEVANQHSHEKQNMMNGAAKYTCRIVVPKSAVSAIIGKGGQQIKQLQDS 138
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+ + I+IS + GLN+R++T+ G+ +
Sbjct: 139 TGSKIQISSRED---GLNERIITIIGSFE 164
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D P I + + GAVIGK GS + + + +GA+I++SR E PGTT+R +
Sbjct: 243 SRDLFNLPCEISIQIPDEFIGAVIGKNGSRLTNIMNSTGAQIRISRKGELVPGTTNRKVR 302
Query: 87 ISGTIDEILRAVDLVIDKL 105
I G++ + A L++ +L
Sbjct: 303 IIGSVAAVHAAHVLLLQRL 321
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
++L++ N GS+IGK G+ I S + + +K+S + + +R++ L G +D+
Sbjct: 21 VKLLINNLVAGSVIGKHGSIITSIENKTGCSLKLSPNNSYFPNTQERVLVLCGKIDQIKD 80
Query: 184 ALELILLKLSE 194
AL +IL K+ E
Sbjct: 81 ALLIILDKIKE 91
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALEL 187
+P+ G++IGK G+ + + M+ + A I+ISR G +R V + G++ A L
Sbjct: 257 IPDEFIGAVIGKNGSRLTNIMNSTGAQIRISRKGELVPGTTNRKVRIIGSVAAVHAAHVL 316
Query: 188 ILLKLSEDTLYSQTMTV 204
+L +L + +TM +
Sbjct: 317 LLQRLESAYMQLRTMQI 333
>gi|157108182|ref|XP_001650113.1| nova [Aedes aegypti]
gi|108868575|gb|EAT32800.1| AAEL014965-PA [Aedes aegypti]
Length = 479
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 95/169 (56%), Gaps = 15/169 (8%)
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL---------LTELHAEDQADDVGT 120
+S++H+F+PGT++R+ +ISGT+D IL +D +IDK+ LT+ A+ AD
Sbjct: 1 MSKAHDFYPGTSERVCLISGTVDGILTVLDFIIDKIREKPDMTKALTDADAKQAADR--- 57
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+++++VPNS+ G IIGKAGA IK ++S + ++IS+ L +R +T+ G +
Sbjct: 58 DKQVKVLVPNSTAGMIIGKAGAYIKQIKEESGSYVQISQKPKELT-LQERCITIIGEKEN 116
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH--GMPYGAVPPP 227
A ++IL K+ ED + V Y + F+ G P+ A P
Sbjct: 117 NKIACKMILQKIVEDPSSGSCLNVSYADINGPVANFNPTGSPFAASQNP 165
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 25 SLSSDPT--EKPTYIRFLVSNP--LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
SLS PT E T V P + GA++G G ++ + Q SGA IQ+S+ F PGT
Sbjct: 362 SLSKSPTPAEMTTSKEKNVEIPEVIVGAILGPAGRSLVEIQHLSGANIQISKKGIFAPGT 421
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTE 108
+RI+ I+G + I A L+ ++ E
Sbjct: 422 RNRIVTITGAPNAINVAHYLIEQRIQEE 449
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
++ ++ LV N AG +IGK G+ I + +SG+ +Q+S+ + +R I I G
Sbjct: 56 DRDKQVKVLVPNSTAGMIIGKAGAYIKQIKEESGSYVQISQKPKELT-LQERCITIIGEK 114
Query: 92 DEILRAVDLVIDKLLTE 108
+ A +++ K++ +
Sbjct: 115 ENNKIACKMILQKIVED 131
>gi|389585810|dbj|GAB68540.1| RNA-binding protein Nova-1, partial [Plasmodium cynomolgi strain B]
Length = 278
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 92/149 (61%), Gaps = 6/149 (4%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T + +++ LV+N +AG+VIGK GS I ++++G ++LS ++ +FP T +R++++ G
Sbjct: 14 TSQLCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGK 73
Query: 91 IDEILRAVDLVIDK---LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
++I A+ +++DK + T+ + Q + K R++VP S+ +IIGK G IK
Sbjct: 74 QEQINNALLIILDKIRQITTQNFQDKQNINTAPKYTCRIVVPKSAVSAIIGKGGQQIKQL 133
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D + A I+IS + GLN+R++++ G
Sbjct: 134 QDSTGAKIQISSRED---GLNERIISIIG 159
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
++++V N GS+IGK G+ I S + + +K+S + + +R++ L G ++
Sbjct: 20 VKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGKQEQINN 79
Query: 184 ALELILLKLSEDT 196
AL +IL K+ + T
Sbjct: 80 ALLIILDKIRQIT 92
>gi|156102214|ref|XP_001616800.1| RNA-binding protein Nova-1 [Plasmodium vivax Sal-1]
gi|148805674|gb|EDL47073.1| RNA-binding protein Nova-1, putative [Plasmodium vivax]
Length = 335
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 93/152 (61%), Gaps = 6/152 (3%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
+ T + +++ LV+N +AG+VIGK GS I ++++G ++LS ++ +FP T +R++++
Sbjct: 11 NKATSQLCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVL 70
Query: 88 SGTIDEILRAVDLVIDK---LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
G ++I A+ +++DK + T+ + Q + K R++VP S+ +IIGK G I
Sbjct: 71 CGKQEQINNALLIILDKIRQITTQNFQDKQNMNTSPKYTCRIVVPKSAVSAIIGKGGQQI 130
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
K D + A I+IS + GLN+R++++ G
Sbjct: 131 KQLQDTTGAKIQISSRED---GLNERIISIIG 159
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D P I + + G+VIGK G+ + + + +GA+I++SR E PGT DR +
Sbjct: 241 SRDLFNLPCEISIQIPDEFIGSVIGKNGARLTNIMNSTGAQIRISRKGELVPGTADRKVR 300
Query: 87 ISGTIDEILRAVDLVIDKL 105
I GT+ + A L++ +L
Sbjct: 301 IMGTVAAVHAAHVLLLQRL 319
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 86/231 (37%), Gaps = 65/231 (28%)
Query: 34 PTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF-----------FPGTT 81
P Y R +V A+IGKGG I Q +GA+IQ+S + F +
Sbjct: 106 PKYTCRIVVPKSAVSAIIGKGGQQIKQLQDTTGAKIQISSREDGLNERIISIIGPFESIS 165
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAED---------------------------- 113
D I ++ +I D + LL ++++D
Sbjct: 166 DTAIKVTNSIQN-----DPNLKDLLNVIYSKDANMNGRSSLSQNFVNQVPLNGYVVPQQY 220
Query: 114 ------QADDVGTKTKL--------------RLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
Q DV L + +P+ GS+IGK GA + + M+ + A
Sbjct: 221 GVFQHEQYMDVNMMNSLMRHSRDLFNLPCEISIQIPDEFIGSVIGKNGARLTNIMNSTGA 280
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
I+ISR G DR V + GT+ A L+L +L + +TM V
Sbjct: 281 QIRISRKGELVPGTADRKVRIMGTVAAVHAAHVLLLQRLESVYMQLRTMQV 331
>gi|397569372|gb|EJK46704.1| hypothetical protein THAOC_34610 [Thalassiosira oceanica]
Length = 507
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 104/192 (54%), Gaps = 37/192 (19%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
P P HG S P I+ LVSN +G +IG+ G TI++ Q++S ARI+
Sbjct: 72 PEPQDHGTSSNQPY-----------VAIKVLVSNSASGLIIGRSGQTISELQAKSHARIK 120
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHA---------EDQADDVGT 120
LS+ +++PGT+DRI ++ G + + A++LV+ KL EL + E AD+ +
Sbjct: 121 LSQGGDYYPGTSDRICLVQGALSCVKVAIELVLAKLY-ELQSLQQVSTQVTEQSADNEPS 179
Query: 121 KTK--------LRLIVPNSSCGSIIGKAGATIKSFMDDSQ-AVIKISRLDH-------SY 164
+ +R+++P++ CG +IG+ G+ IK + S+ + I++S +H +
Sbjct: 180 QQVIQPPPVFIIRVLMPSACCGMVIGRGGSNIKELKEKSRVSFIQLSPKEHEVLVGHGAT 239
Query: 165 YGLNDRLVTLTG 176
N+R++T+TG
Sbjct: 240 LSTNERIMTITG 251
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G+++GKGG + D Q+ + +I++S+ +F PGT +R + I+G E + A + I + +
Sbjct: 443 GSILGKGGKILTDIQASTRTKIRISQRGDFIPGTKNRSVTITGQTREDVEAAEKRIHECI 502
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
RL +P+ GSI+GK G + ++ I+IS+ G +R VT+TG E + A
Sbjct: 434 RLGIPDYRIGSILGKGGKILTDIQASTRTKIRISQRGDFIPGTKNRSVTITGQTREDVEA 493
Query: 185 LE 186
E
Sbjct: 494 AE 495
>gi|395751404|ref|XP_003780598.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2 [Pongo
abelii]
Length = 681
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 16/200 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+ + GTT+R+ ++ GT E L
Sbjct: 134 FLKELIPSYAAGSIIGKGGQTIVQLQKETGATIKXXXXVPWHTGTTERVCLVQGTA-EAL 192
Query: 96 RAVDLVIDKLLTELHAEDQADDV------------GTKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ +V + +LIVPNS+ G IIGK GAT
Sbjct: 193 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 252
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 253 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 311
Query: 204 VPYT-YAG-VFFSGFHGMPY 221
+ Y AG V S G PY
Sbjct: 312 ISYANVAGPVANSNPTGSPY 331
>gi|302842809|ref|XP_002952947.1| hypothetical protein VOLCADRAFT_93708 [Volvox carteri f.
nagariensis]
gi|300261658|gb|EFJ45869.1| hypothetical protein VOLCADRAFT_93708 [Volvox carteri f.
nagariensis]
Length = 487
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 93/158 (58%), Gaps = 2/158 (1%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSG-ARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++ VSN LAG++IG+GG + Q SG ARIQLSR +E + GT+DR+++++GT+ +
Sbjct: 40 MKLCVSNALAGSIIGRGGHNRDQLQLISGGARIQLSRPNELYSGTSDRVLVLTGTLGSCI 99
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A+ + L +A +G T+ +LI+P+S CG I+G G T+++ + A I
Sbjct: 100 TALFAISGCLGMPGPLPLEAVFMGVSTQWKLILPSSVCGYILGAGGRTVRAITAQADANI 159
Query: 156 KIS-RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
IS D +R+ T++G + +RA+ +I+ KL
Sbjct: 160 SISAEPDRDAELPRERIATISGGCLQTLRAMGIIVDKL 197
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS----RSHEFFPGTTDRIIMISGT 90
T + ++ + + G ++G GG T+ +Q+ A I +S R E +RI ISG
Sbjct: 126 TQWKLILPSSVCGYILGAGGRTVRAITAQADANISISAEPDRDAEL---PRERIATISGG 182
Query: 91 IDEILRAVDLVIDKLLTE 108
+ LRA+ +++DKLLT
Sbjct: 183 CLQTLRAMGIIVDKLLTR 200
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 116 DDVGTKTKL-RLIVPNSSCGSIIGKAGATIKSF-MDDSQAVIKISRLDHSYYGLNDRLVT 173
D++G + L +L V N+ GSIIG+ G + A I++SR + Y G +DR++
Sbjct: 31 DELGGQVVLMKLCVSNALAGSIIGRGGHNRDQLQLISGGARIQLSRPNELYSGTSDRVLV 90
Query: 174 LTGTLDEQMRAL 185
LTGTL + AL
Sbjct: 91 LTGTLGSCITAL 102
>gi|221060388|ref|XP_002260839.1| RNA-binding protein [Plasmodium knowlesi strain H]
gi|193810913|emb|CAQ42811.1| RNA-binding protein, putative [Plasmodium knowlesi strain H]
Length = 334
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 94/149 (63%), Gaps = 6/149 (4%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T + +++ LV+N +AG+VIGK GS I ++++G ++LS ++ +FP T +R++++ G
Sbjct: 13 TNQLCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGK 72
Query: 91 IDEILRAVDLVIDKL--LTELHAEDQAD-DVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
++I A+ +++DK+ +T +D+ + + K R+++P S+ +IIGK G IK
Sbjct: 73 QEQINNALLIILDKIRQITVQSFQDKQNMNTVPKYTCRIVIPKSAASAIIGKGGQQIKQL 132
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D + A I+IS + GLN+R++++ G
Sbjct: 133 QDSTGAKIQISSRED---GLNERIISIIG 158
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D P I + + G+VIGK GS + + + +GA+I++SR E PGT DR +
Sbjct: 240 SRDLFNLPCEISIQIPDEFIGSVIGKNGSRLTNIMNSTGAQIRISRKGELIPGTADRKVR 299
Query: 87 ISGTIDEILRAVDLVIDKL 105
I GT+ + A L++ +L
Sbjct: 300 IMGTVAAVHGAHVLLLQRL 318
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 88/226 (38%), Gaps = 55/226 (24%)
Query: 34 PTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF-----------FPGTT 81
P Y R ++ A A+IGKGG I Q +GA+IQ+S + F +
Sbjct: 105 PKYTCRIVIPKSAASAIIGKGGQQIKQLQDSTGAKIQISSREDGLNERIISIIGPFESIS 164
Query: 82 DRIIMISGTI--DEILRAVDLVIDKLLTELHAE--------------------------- 112
D I ++ +I D L+ + VI T ++
Sbjct: 165 DTAIKVTNSIQNDPNLKDLLNVIYNKDTNMNGRSSLSQNFVNQVPLNGYVVPQQYGVFQH 224
Query: 113 DQADDVGTKTKL--------------RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+Q DV L + +P+ GS+IGK G+ + + M+ + A I+IS
Sbjct: 225 EQYMDVNMMNSLMRHSRDLFNLPCEISIQIPDEFIGSVIGKNGSRLTNIMNSTGAQIRIS 284
Query: 159 RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
R G DR V + GT+ A L+L +L + +TM V
Sbjct: 285 RKGELIPGTADRKVRIMGTVAAVHGAHVLLLQRLESVYMQLRTMQV 330
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
++++V N GS+IGK G+ I S + + +K+S + + +R++ L G ++
Sbjct: 19 VKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGKQEQINN 78
Query: 184 ALELILLKLSEDTLYS----QTM-TVP-YT 207
AL +IL K+ + T+ S Q M TVP YT
Sbjct: 79 ALLIILDKIRQITVQSFQDKQNMNTVPKYT 108
>gi|237844115|ref|XP_002371355.1| KH domain-containing protein [Toxoplasma gondii ME49]
gi|211969019|gb|EEB04215.1| KH domain-containing protein [Toxoplasma gondii ME49]
gi|221506360|gb|EEE31995.1| KH domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 412
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 37/194 (19%)
Query: 27 SSDPTEK------PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
SS P+ K P Y++ +V+N AGA+IGK G I + Q+G ++LS + F+PGT
Sbjct: 4 SSTPSTKRSAFQGPCYLKMIVNNVAAGAIIGKNGIAIAAMEQQTGCALKLSPLNAFYPGT 63
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL---------LTELHAEDQADDVGT----------- 120
DR++++SG +++ A+ L++ K+ + + QA G+
Sbjct: 64 QDRVLVMSGEQEQVNNALVLILGKIKETVTSHFGTSGTQSGAQAGSTGSGSPELARQAFG 123
Query: 121 -------KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
K RL VP S+ +IIGK G I+ D + A +++S + GL +R++T
Sbjct: 124 SDAAAQHKITCRLAVPRSAVSTIIGKGGQQIRELQDTTGARVQVSSREE---GLAERMIT 180
Query: 174 LTGTLDEQMRALEL 187
++G L EQ+RA L
Sbjct: 181 ISGVL-EQVRAAAL 193
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I V + GAVIG+ G+ + + + +GAR+Q+S+ + PGT DR I++SGT+ +
Sbjct: 279 ISLQVPDQSIGAVIGRNGACVTEVINATGARVQISQKGDLVPGTNDRKIVLSGTVGAVHS 338
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK 121
A L LL +HA D G K
Sbjct: 339 AHLL----LLQRIHAVQ--DGAGGK 357
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++IV N + G+IIGK G I + + +K+S L+ Y G DR++ ++G ++
Sbjct: 20 LKMIVNNVAAGAIIGKNGIAIAAMEQQTGCALKLSPLNAFYPGTQDRVLVMSGEQEQVNN 79
Query: 184 ALELILLKLSE 194
AL LIL K+ E
Sbjct: 80 ALVLILGKIKE 90
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ ++ L VP+ S G++IG+ GA + ++ + A ++IS+ G NDR + L+GT+
Sbjct: 276 QCEISLQVPDQSIGAVIGRNGACVTEVINATGARVQISQKGDLVPGTNDRKIVLSGTVGA 335
Query: 181 QMRALELILLKL 192
A L+L ++
Sbjct: 336 VHSAHLLLLQRI 347
>gi|401412830|ref|XP_003885862.1| HnRNP-E2 protein, related [Neospora caninum Liverpool]
gi|325120282|emb|CBZ55836.1| HnRNP-E2 protein, related [Neospora caninum Liverpool]
Length = 417
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 98/185 (52%), Gaps = 33/185 (17%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
+ P Y++ +V+N AGA+IGK G I + Q+G ++LS + F+PGT DR++++SG
Sbjct: 15 QGPCYLKMIVNNVAAGAIIGKNGVAIAAMEQQTGCALKLSPLNAFYPGTQDRVLVMSGEQ 74
Query: 92 DEILRAVDLVIDKL----LTELHAEDQ--------------ADDVGT-----------KT 122
+++ A+ L++ K+ ++ A Q A+ VG K
Sbjct: 75 EQVNNALVLILGKIKETVTSQFGAGTQTGTQPGSNGAGNGSAECVGRDPFGSNDASQHKI 134
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
RL VP S+ +IIGK G I+ D + A +++S + GL +R++T+TG L EQ+
Sbjct: 135 TCRLAVPRSAVSTIIGKGGQQIRELQDTTGARVQVSCREE---GLAERMITITGLL-EQV 190
Query: 183 RALEL 187
RA L
Sbjct: 191 RAAAL 195
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I V + GAVIG+ G+ + + + +GARIQ+S+ + PGT DR I++SGT+ +
Sbjct: 280 ISLQVPDQSIGAVIGRNGACVTEVINATGARIQISQKGDLVPGTNDRKIVLSGTVGAVHS 339
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK 121
A L LL +HA D VG K
Sbjct: 340 AHLL----LLQRIHAVQ--DGVGGK 358
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++IV N + G+IIGK G I + + +K+S L+ Y G DR++ ++G ++
Sbjct: 20 LKMIVNNVAAGAIIGKNGVAIAAMEQQTGCALKLSPLNAFYPGTQDRVLVMSGEQEQVNN 79
Query: 184 ALELILLKLSEDTLYSQ 200
AL LIL K+ E T+ SQ
Sbjct: 80 ALVLILGKIKE-TVTSQ 95
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+D ++ R V +IGKGG I + Q +GAR+Q+S E G +R+I
Sbjct: 126 SNDASQHKITCRLAVPRSAVSTIIGKGGQQIRELQDTTGARVQVSCREE---GLAERMIT 182
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G ++++ RA L I +
Sbjct: 183 ITGLLEQV-RAAALGIASCI 201
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D + + ++ L VP+ S G++IG+ GA + ++ + A I+IS+ G NDR + L+
Sbjct: 272 DALSLQCEISLQVPDQSIGAVIGRNGACVTEVINATGARIQISQKGDLVPGTNDRKIVLS 331
Query: 176 GTLDEQMRALELILLKL 192
GT+ A L+L ++
Sbjct: 332 GTVGAVHSAHLLLLQRI 348
>gi|68071447|ref|XP_677637.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497827|emb|CAH98378.1| conserved hypothetical protein [Plasmodium berghei]
Length = 337
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 93/154 (60%), Gaps = 4/154 (2%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V+++ D T + +++ L++N LAG++IGK G I+ ++++G ++LS ++ FFP T
Sbjct: 8 VQTIKGD-TNQLCFVKMLINNLLAGSIIGKNGEIISGIENKTGCSLKLSPNNSFFPNTQK 66
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
R+++I G ++I + +++DK+ +++++ R++VP S+ +IIGK G
Sbjct: 67 RVLVICGKQEQINNVIIIILDKIRQISLPNNKSENKIQTYTCRIVVPKSAVSAIIGKGGY 126
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
IK + + I+IS + YGL +R++T+ G
Sbjct: 127 QIKQLQNITGTKIQISNRE---YGLYERIITIVG 157
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P I + + G+VIGK G+ + + + +GA+I++SR E PGT DR I GT+
Sbjct: 255 PCEIFIEIPDEFIGSVIGKNGARLTNIMNSTGAQIKISRKGELVPGTFDRKTQIIGTVAA 314
Query: 94 ILRAVDLVIDKL 105
+ A LV+ +L
Sbjct: 315 VHAAHVLVLQRL 326
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALEL 187
+P+ GS+IGK GA + + M+ + A IKISR G DR + GT+ A L
Sbjct: 262 IPDEFIGSVIGKNGARLTNIMNSTGAQIKISRKGELVPGTFDRKTQIIGTVAAVHAAHVL 321
Query: 188 ILLKLS 193
+L +L
Sbjct: 322 VLQRLE 327
>gi|299115635|emb|CBN75836.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 296
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 111/194 (57%), Gaps = 16/194 (8%)
Query: 24 KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
+SL+ DP + I+FLV N AG++IGK G+TI D Q ++ + ++ S ++PGT +R
Sbjct: 77 ESLAQDPD---SAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVGIATSGMYYPGTMER 133
Query: 84 IIMISGTIDEILRAVDLVIDKL---------LTELHAEDQADDVGTKTKLRLIVPNSSCG 134
++++G + + +A L++ L +L ++++A+ + + RL++P ++ G
Sbjct: 134 AVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVSQEKAEAI--EVTQRLLIPLTAGG 191
Query: 135 SIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
+IG+ GA I + + S A K++ + +++RLVT+ G L +A+E+++ KL E
Sbjct: 192 LVIGRRGANIAALLAASGA--KVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVE 249
Query: 195 DTLYSQTMTVPYTY 208
+ + S+ + Y
Sbjct: 250 EPVLSRFANLSVNY 263
>gi|74007267|ref|XP_548937.2| PREDICTED: poly(rC)-binding protein 1-like [Canis lupus familiaris]
Length = 362
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 113/235 (48%), Gaps = 21/235 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G + F+ +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHRKEVGSIIGKKGESPKRFRKESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP CGS+IGK G IK + + A
Sbjct: 71 AFVMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAYQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 207 --TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKVLLPWPL 259
+ + G Y A P PH+T GP + Q + P L
Sbjct: 187 PASSPVICAGGQDRWGYAAGYPHAAGYPHDTHYLEGPPLDAYSIQGQHTVSPLDL 241
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPAYQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ F + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 270 SPEVKGYWA-------SLDASTQTTH-EFTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 321
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 322 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 356
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 281 DASTQTTHEFTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 337
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 338 SAASISLAQYLINARLSSE 356
>gi|291237680|ref|XP_002738761.1| PREDICTED: poly(rC) binding protein 2-like [Saccoglossus
kowalevskii]
Length = 409
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 29/214 (13%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
+K +++D IR ++ G++IGKGG TI F+ QSGARI +S S +
Sbjct: 7 IKKMANDGPAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDSS-----CAE 61
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSI 136
RI+ ++G+ + I A +++ K ED ++++ + LRL+VP S CGS+
Sbjct: 62 RIVTVTGSTEAINNAFEMITKKF-----EEDVSNNMANSSTPKPPVTLRLVVPASQCGSL 116
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
IGK G+ IK +++ A ++++ + +R VT++GT + + + I + E
Sbjct: 117 IGKGGSKIKEIRENTGASVQVA--GDMLHQSTERAVTISGTPEAITKCVYQICCVMLESP 174
Query: 197 LYSQTMTVPY---------TYAGVFFSGFHGMPY 221
+ T+PY T+ G + +PY
Sbjct: 175 --PKGATIPYRPKPTNATATHPAYAVHGNYAVPY 206
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T + TY ++ N L G VIG+GG+ IN+ + SGA I+++ S E G+ DR + ISGT
Sbjct: 253 TGQQTY-EIMIPNDLIGCVIGRGGAKINEIRQISGATIKIANSQE---GSNDRSVTISGT 308
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTKTKL 124
++ I A L+ L EL A++ A ++ K L
Sbjct: 309 VEAINLAHFLINSSL--EL-AKNLAPELAAKANL 339
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 111 AEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDR 170
A Q G +T +++PN G +IG+ GA I S A IKI+ +S G NDR
Sbjct: 246 AGTQVATTGQQT-YEIMIPNDLIGCVIGRGGAKINEIRQISGATIKIA---NSQEGSNDR 301
Query: 171 LVTLTGTLD 179
VT++GT++
Sbjct: 302 SVTISGTVE 310
>gi|76154163|gb|AAX25658.2| SJCHGC08372 protein [Schistosoma japonicum]
Length = 160
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ P + + + LV + AGA+IGKGG I + Q+Q+ A++++S+++ F+PGTT+R+
Sbjct: 34 LTLKPAKGNVHFKILVPSIAAGAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERVC 93
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVG-----TKTKLRLIVPNSSCGSIIGKA 140
+I GT + ILR + +K+ + + + G +++++VPNS+ G IIGK
Sbjct: 94 LIVGTTESILRVFQYISEKVYEKPESIAKTGCEGRIPTERHKQVKILVPNSTAGMIIGKG 153
Query: 141 GATIKSF 147
G+ IK
Sbjct: 154 GSFIKEL 160
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+++VP+ + G+IIGK G I + + A +K+S+ + Y G +R+ + GT + +R
Sbjct: 45 FKILVPSIAAGAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERVCLIVGTTESILR 104
Query: 184 ALELILLKLSED 195
+ I K+ E
Sbjct: 105 VFQYISEKVYEK 116
>gi|167516250|ref|XP_001742466.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779090|gb|EDQ92704.1| predicted protein [Monosiga brevicollis MX1]
Length = 319
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I+ L+ AG VIG+GG I+ Q ++G ++LS++ EF+PGT +R +I G ++
Sbjct: 14 IKLLIPAKCAGGVIGRGGENISKLQEETGLHVKLSQTREFYPGTAERTCLIQGEPTRLIV 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
V+ V+D ++ +D D + + VP ++ GS++GK G+ +K D + I
Sbjct: 74 GVNRVLDIIVAN---DDHQDGTSLANPVTVAVPYNAAGSVLGKGGSILKGIKDATGCKII 130
Query: 157 ISRLDHSYYGLNDRLVTLTG--TLDEQMRALELILLKL--SEDTLYSQTMTVPYTYAGVF 212
IS+ D +RL+ + L+ ++ ++ L E+ L +++ Y+
Sbjct: 131 ISQKDGPAARYGERLIKIVSPTPLEVPREGVKRVMDALLAQEENLQFHNLSISYSTMEPR 190
Query: 213 FSGFHGMPYGAVPPPVP--AVPHNTAAHYGPNMG 244
F G PPPV VP AA Y P G
Sbjct: 191 FGG---------PPPVQNYGVP---AATYEPGRG 212
>gi|156388117|ref|XP_001634548.1| predicted protein [Nematostella vectensis]
gi|156221632|gb|EDO42485.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ ++ G++IGK GSTI F+ +S A I +S T +RI+ ++GT D ++
Sbjct: 29 LKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGS-----TPERIVSVTGTKDAVVT 83
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A L+ KL EL + +++ T LRLIVP S CGSIIGK GA IK + S A +
Sbjct: 84 AFALIGQKLEDELKSNSKSNTTPPVT-LRLIVPGSQCGSIIGKGGAKIKEIREVSGASVV 142
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT-VPYTYAGVFFSG 215
++ G ++R VTL+GT + ++L+ + E M P+ F G
Sbjct: 143 VA--GEFLPGSSERAVTLSGTPEALETCIDLLCGVMIEFPPRGHPMPYTPHKLQQQF--G 198
Query: 216 FHGMPYGAVPPPVPAVPH 233
F+G P G P +PH
Sbjct: 199 FYGPPQGFGYPGPYGMPH 216
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 16 GKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
G++ +KS S T P +R +V G++IGKGG+ I + + SGA + + + E
Sbjct: 89 GQKLEDELKSNSKSNTTPPVTLRLIVPGSQCGSIIGKGGAKIKEIREVSGASVVV--AGE 146
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
F PG+++R + +SGT + + +DL+ ++
Sbjct: 147 FLPGSSERAVTLSGTPEALETCIDLLCGVMI 177
>gi|82540955|ref|XP_724754.1| RNA-binding protein Nova-2 [Plasmodium yoelii yoelii 17XNL]
gi|23479512|gb|EAA16319.1| RNA-binding protein Nova-2 [Plasmodium yoelii yoelii]
Length = 338
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 97/171 (56%), Gaps = 11/171 (6%)
Query: 24 KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
+++ D T+ +++ L++N +AG++IGK G I+ ++++G ++LS ++ FFP T R
Sbjct: 9 QAIEEDRTQ-LCFVKMLINNLVAGSIIGKNGEIISGIENKTGCSLKLSPNNSFFPNTQKR 67
Query: 84 IIMISGTIDEILRAVDLVIDKL--LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAG 141
+++I G +I V +++DK+ ++ L + T T R++VP S+ +IIGK G
Sbjct: 68 VLVICGKKKQINNVVLIILDKIRQISSLANNKNEKKIKTYT-CRIVVPKSAVSAIIGKGG 126
Query: 142 ATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL----DEQMRALELI 188
IK + + I++S + GL +R++T+ G+ D + +E I
Sbjct: 127 YQIKQLQNKTGTKIQVSNRE---CGLYERIITIVGSFASIKDTATKVIEAI 174
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
G+VIGK GS + + + +GA+I++S+ E PGT DR I GT+ + A LV+ L
Sbjct: 269 GSVIGKNGSRLTNIMNSTGAKIKISKKGELIPGTFDRKTKIIGTVAAVHAAHVLVLQCL 327
>gi|392347468|ref|XP_003749842.1| PREDICTED: poly(rC)-binding protein 1 [Rattus norvegicus]
Length = 516
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 176 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 230
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 231 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 290
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 291 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 343
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 420 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 476
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 477 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 510
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
+ N L G +IG+ G+ IN+ + SGA+I+++ E G++ R + I+G+ I A
Sbjct: 444 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE---GSSGRQVTITGSAASISLAQ 500
Query: 99 DLVIDKLLTE 108
L+ +L +E
Sbjct: 501 YLINARLSSE 510
>gi|70933846|ref|XP_738237.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514288|emb|CAH87175.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 262
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 99/182 (54%), Gaps = 9/182 (4%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T + +++ L++N +AG++IGK GS I+ ++++G ++LS ++ +FP T R+++I G
Sbjct: 15 TSQLCFVKMLINNLVAGSIIGKNGSIISGIENKTGCSLKLSPNNSYFPNTQKRVLVICGK 74
Query: 91 IDEILRAVDLVIDKLL-----TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+EI + +++DK+ +H + T T R++VP S+ +IIGK G IK
Sbjct: 75 QEEINNVIIIILDKIRQISIPNNMHVNKNENKTQTYT-CRVVVPKSAVSAIIGKGGHQIK 133
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+++ I+IS + GLN+R++++ G+ D ++ + D + V
Sbjct: 134 QLQNNTGTKIQISNRED---GLNERIISIVGSFDSVRDTTTKVIASIQTDPNLKDLLNVI 190
Query: 206 YT 207
Y
Sbjct: 191 YN 192
>gi|70949112|ref|XP_743997.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56523758|emb|CAH77309.1| hypothetical protein PC000132.02.0 [Plasmodium chabaudi chabaudi]
Length = 234
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 99/182 (54%), Gaps = 9/182 (4%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T + +++ L++N +AG++IGK GS I+ ++++G ++LS ++ +FP T R+++I G
Sbjct: 15 TSQLCFVKMLINNLVAGSIIGKNGSIISGIENKTGCSLKLSPNNSYFPNTQKRVLVICGK 74
Query: 91 IDEILRAVDLVIDKLL-----TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+EI + +++DK+ +H + T T R++VP S+ +IIGK G IK
Sbjct: 75 QEEINNVIIIILDKIRQISIPNNMHVNKNENKTQTYT-CRVVVPKSAVSAIIGKGGHQIK 133
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+++ I+IS + GLN+R++++ G+ D ++ + D + V
Sbjct: 134 QLQNNTGTKIQISNRED---GLNERIISIVGSFDSVRDTTTKVIASIQTDPNLKDLLNVI 190
Query: 206 YT 207
Y
Sbjct: 191 YN 192
>gi|390604812|gb|EIN14203.1| hypothetical protein PUNSTDRAFT_95868 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 330
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 98/180 (54%), Gaps = 10/180 (5%)
Query: 19 STAPVKSLSSDPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
S +P +S S P T +R LVS AG +IGKGG + D + Q+G + +S+
Sbjct: 11 SPSPGRSRSGSPAGPDTLTLRALVSTKDAGVIIGKGGKNVADLRDQTGVKAGVSK---VV 67
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
PG DR++ ISG++D + +A L++ +L+ + T T LRL++ ++ G+II
Sbjct: 68 PGVHDRVLTISGSVDRVAKAYGLIVAQLVASNPTSPISASSSTHTSLRLLISHNLMGTII 127
Query: 138 GKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
G+ G IK+ D+S A + S+ L S +R+V + G+++ RA++ I L ED
Sbjct: 128 GRGGTRIKAIQDNSGARMVASKDMLPQS----TERVVEVHGSVEAIERAVDDIGKSLLED 183
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 4 NESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIR---FLVSNPLAGAVIGKGGSTINDF 60
N SY S +G+ + S + + +PT +R + + + G +IG+GGS I +
Sbjct: 211 NRGSYGGSRQSNGRPGSPGSPSRQAPSSPQPTNLRTQNISIPSDMVGCIIGRGGSKITEI 270
Query: 61 QSQSGARIQLSRS-HEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH---AEDQAD 116
+ SG++I ++++ H+ T +R+ I GT + +A+ L+ ++L +E +Q
Sbjct: 271 RRLSGSKISIAKAPHDE---TGERMFTIVGTPEANEKALFLLYNQLESEKERRVGREQQQ 327
Query: 117 DV 118
D+
Sbjct: 328 DI 329
>gi|326917277|ref|XP_003204927.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 448
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 98/187 (52%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S +RI+ I+G D I +
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGS-----CPERIVTITGPTDAIFK 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K +++A V +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 74 AFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 134 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 187
Query: 209 AGVFFSG 215
A + F+G
Sbjct: 188 APIIFAG 194
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
SS ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R +
Sbjct: 93 SSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVT 150
Query: 87 ISGTIDEILRAVDLVIDKLL 106
ISGT D I++ V + +L
Sbjct: 151 ISGTPDAIIQCVKQICVVML 170
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D T + + N L G +IG+ GS IN+ + SGA+I+++ + E G+ +R + I+
Sbjct: 261 DATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATE---GSAERQVTIT 317
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRL 126
G+ I A +I+ L Q V T L +
Sbjct: 318 GSPANISLA-QYLINASLEMAKVSTQTASVTTPVDLNM 354
>gi|460771|emb|CAA55016.1| hnRNP-E1 [Homo sapiens]
Length = 356
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 25/234 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY--- 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 186
Query: 207 -TYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKVLLPWPL 259
+ V +G AV PH T GP + Q + P L
Sbjct: 187 PASSPVICAGGQDRCSDAV-----GYPHATHDLEGPPLDAYSIQGQHTISPLDL 235
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 331
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 332 SAASISLAQYLINARLSSE 350
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>gi|118086587|ref|XP_419049.2| PREDICTED: poly(rC)-binding protein 3 [Gallus gallus]
Length = 448
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 98/187 (52%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S +RI+ I+G D I +
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGS-----CPERIVTITGPTDAIFK 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K +++A V +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 74 AFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 134 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 187
Query: 209 AGVFFSG 215
A + F+G
Sbjct: 188 APIIFAG 194
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 97 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGT 154
Query: 91 IDEILRAVDLVIDKLL 106
D I++ V + +L
Sbjct: 155 PDAIIQCVKQICVVML 170
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D T + + N L G +IG+ GS IN+ + SGA+I+++ + E G+ +R + I+
Sbjct: 261 DATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATE---GSAERQVTIT 317
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRL 126
G+ I A +I+ L Q V T L +
Sbjct: 318 GSPANISLA-QYLINASLEMAKVSTQTASVTTPVDLNM 354
>gi|417409319|gb|JAA51170.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 283
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 25 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 79
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 80 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 139
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 140 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 192
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 99 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 156
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 157 IAGVPQSVTECVKQICLVMLETLSQ 181
>gi|449493846|ref|XP_002188887.2| PREDICTED: poly(rC)-binding protein 3-like [Taeniopygia guttata]
Length = 352
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 21/188 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT-DRIIMISGTIDEIL 95
IR L+ G++IGK G T+ + +SGARI +S GT +RI+ I+G D I
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISE------GTCPERIVTITGPTDAIF 72
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A ++ K +++A V +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 KAFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 132
Query: 154 VIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----T 207
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 133 QVQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPA 186
Query: 208 YAGVFFSG 215
A + F+G
Sbjct: 187 SAPIIFAG 194
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
SS ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R +
Sbjct: 93 SSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVT 150
Query: 87 ISGTIDEILRAVDLVIDKLL 106
ISGT D I++ V + +L
Sbjct: 151 ISGTPDAIIQCVKQICVVML 170
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D T + + N L G +IG+ GS IN+ + SGA+I+++ + E G+ +R + I+
Sbjct: 261 DATTPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATE---GSAERQVTIT 317
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 318 GSPANISLAQYLI 330
>gi|327275209|ref|XP_003222366.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 461
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S +RI+ I+G D I +
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGS-----CPERIVTITGPTDAIFK 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K +++A V +K LRL++P S CGS+IGK G+ IK + + A
Sbjct: 74 AFSMIALKFEEDINASMTNSTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 134 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 187
Query: 209 AGVFFSG 215
A + F+G
Sbjct: 188 APIIFAG 194
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R ++ G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 97 SKPPVTLRLVIPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGT 154
Query: 91 IDEILRAVDLVIDKLL 106
D I++ V + +L
Sbjct: 155 PDAIIQCVKQICVVML 170
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ GS IN+ + SGA+I+++ + E G+ +R + I+G+ I A
Sbjct: 286 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATE---GSAERQVTITGSPANISLA 342
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRL 126
+I+ L Q V T L +
Sbjct: 343 -QYLINASLEMAKVSTQTASVTTPVDLNM 370
>gi|195022402|ref|XP_001985568.1| GH14429 [Drosophila grimshawi]
gi|193899050|gb|EDV97916.1| GH14429 [Drosophila grimshawi]
Length = 362
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Query: 13 DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
+ G S AP+K DP+ T IR ++ G++IGK G +N F+ +SGA+I +S
Sbjct: 5 NTSGSASGAPIKL--EDPSVTLT-IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD 61
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG-TKTKLRLIVPNS 131
+RI+ +SGT I A L+ K + VG T+ +RLIVP S
Sbjct: 62 GS-----CPERIVTVSGTTSAIFAAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPAS 116
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
CGS+IGK+G+ IK ++ I+++ +R VTL+G+ ++ + + I L
Sbjct: 117 QCGSLIGKSGSKIKEIRQNTGCSIQVA--SEMLPNSTERAVTLSGSAEQITQCIYQICLV 174
Query: 192 LSEDTLYSQTMTVPY 206
+ E + T+PY
Sbjct: 175 MLESP--PRGATIPY 187
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A
Sbjct: 270 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 329
Query: 99 DLV 101
L+
Sbjct: 330 YLI 332
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 270 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 329
Query: 186 ELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
LI +++S +T AG+ G+H
Sbjct: 330 YLINMRISMET------------AGLPIPGYH 349
>gi|392340090|ref|XP_002726454.2| PREDICTED: poly(rC)-binding protein 1, partial [Rattus norvegicus]
Length = 365
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 101/192 (52%), Gaps = 16/192 (8%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
PV ++ IR L+ G++IGK G ++ + +SGARI +S +
Sbjct: 10 PVNRVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CP 64
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGK 139
+RII ++G + I +A ++IDKL ++++ ++ LRL+VP + CGS+IGK
Sbjct: 65 ERIITLTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 124
Query: 140 AGATIKSFMDDSQAVIKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSE 194
G IK + + A ++++ L +S +R +T+ G ++ E ++ + L++L+
Sbjct: 125 GGCKIKEIRESTGAQVQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLS 180
Query: 195 DTLYSQTMTVPY 206
+ + MT+PY
Sbjct: 181 QSPQGRVMTIPY 192
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 284 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 340
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 341 SAASISLAQYLINARLSSE 359
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 273 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 324
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 325 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 359
>gi|355709446|gb|AES03594.1| Poly rC-binding protein 1 [Mustela putorius furo]
Length = 209
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
>gi|134026176|gb|AAI35317.1| LOC733863 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S +RI+ I+G D I +
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGS-----CPERIVTITGPTDAIFK 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K +++A V +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 74 AFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 134 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 181
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 97 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGT 154
Query: 91 IDEILRAVDLVIDKLL 106
D I++ V + +L
Sbjct: 155 PDAIIQCVKQICVVML 170
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D T + + N L G +IG+ GS IN+ + SGA+I+++ + E G +R + I+
Sbjct: 285 DATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASE---GNGERQVTIT 341
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 342 GSPANISLAQYLI 354
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
L +PN G IIG+ G+ I S A IKI+ ++ G +R VT+TG+ A
Sbjct: 294 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIA---NASEGNGERQVTITGSPANISLA 350
Query: 185 LELILLKLSEDTLYSQTMTV 204
LI L L +QT +V
Sbjct: 351 QYLINASLEMAKLSTQTASV 370
>gi|168028621|ref|XP_001766826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682035|gb|EDQ68457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 705
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 83/169 (49%), Gaps = 12/169 (7%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V N G VIGKGG TI Q QSGARIQ++R E P ++ R + + GT ++I RA L
Sbjct: 251 VPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGESDPRSSTRQVELMGTPEQISRAEQL 310
Query: 101 VIDKLLTELHAEDQADDVGTKT-----------KLRLIVPNSSCGSIIGKAGATIKSFMD 149
V D ++ E A ++++ VPN+ G IIG+ G TIK+
Sbjct: 311 VKD-VIAEASAGTPGGGGLGGRGFGGPVGPAGEQVQVKVPNNKVGLIIGRGGETIKNLQS 369
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY 198
S A I++ + G +R+VTL G A ELI + E T Y
Sbjct: 370 RSGARIQVQNDSETEPGATERMVTLIGNKKATDMAYELIKEVIDELTSY 418
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ V N G +IG+GG TI + QS+SGARIQ+ E PG T+R++ + G
Sbjct: 344 VQVKVPNNKVGLIIGRGGETIKNLQSRSGARIQVQNDSETEPGATERMVTLIGNKKATDM 403
Query: 97 AVDL---VIDKLLT 107
A +L VID+L +
Sbjct: 404 AYELIKEVIDELTS 417
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G ++ VPNS G +IGK G TIK S A I+++R S + R V L GT
Sbjct: 242 GPNQSRKIDVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGESDPRSSTRQVELMGTP 301
Query: 179 DEQMRALELILLKLSE 194
++ RA +L+ ++E
Sbjct: 302 EQISRAEQLVKDVIAE 317
>gi|397521888|ref|XP_003831016.1| PREDICTED: poly(rC)-binding protein 1 [Pan paniscus]
Length = 455
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 115 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 169
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 170 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 229
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 230 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 282
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D+ +++ +RL++ GSIIGK G ++K ++S A I IS + +R++
Sbjct: 104 DEENELNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERII 158
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQT 201
TLTG + +A +I+ KL ED S T
Sbjct: 159 TLTGPTNAIFKAFAMIIDKLEEDINSSMT 187
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 189 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 246
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 247 IAGVPQSVTECVKQICLVMLETLSQ 271
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 374 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 430
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 431 SAASISLAQYLINARLSSE 449
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 363 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 414
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 415 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 449
>gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens]
Length = 299
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
>gi|403260495|ref|XP_003922705.1| PREDICTED: poly(rC)-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 302
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
>gi|417410101|gb|JAA51528.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 365
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 25 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 79
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 80 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 139
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 140 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 192
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 99 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 156
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 157 IAGVPQSVTECVKQICLVMLETLSQ 181
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 284 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 340
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 341 SAASISLAQYLINARLSSE 359
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 273 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 324
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 325 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 359
>gi|351714348|gb|EHB17267.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 15 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 69
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 70 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 129
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 130 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 182
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 89 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 146
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 147 IAGVPQSVTECVKQICLVMLETLSQ 171
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 274 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 330
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 331 SAASISLAQYLINARLSSE 349
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 263 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 314
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 315 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 349
>gi|6754994|ref|NP_035995.1| poly(rC)-binding protein 1 [Mus musculus]
gi|62751650|ref|NP_001015565.1| poly(rC)-binding protein 1 [Bos taurus]
gi|126723096|ref|NP_001075593.1| poly(rC)-binding protein 1 [Oryctolagus cuniculus]
gi|222352151|ref|NP_006187.2| poly(rC)-binding protein 1 [Homo sapiens]
gi|379642963|ref|NP_001243850.1| poly(rC)-binding protein 1 [Equus caballus]
gi|114577924|ref|XP_515530.2| PREDICTED: poly(rC)-binding protein 1 isoform 3 [Pan troglodytes]
gi|296223628|ref|XP_002757702.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
gi|297667414|ref|XP_002811975.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Pongo abelii]
gi|301758216|ref|XP_002914950.1| PREDICTED: poly(rC)-binding protein 1-like [Ailuropoda melanoleuca]
gi|332226765|ref|XP_003262561.1| PREDICTED: poly(rC)-binding protein 1 [Nomascus leucogenys]
gi|348566575|ref|XP_003469077.1| PREDICTED: poly(rC)-binding protein 1-like [Cavia porcellus]
gi|354491739|ref|XP_003508012.1| PREDICTED: poly(rC)-binding protein 1-like [Cricetulus griseus]
gi|395731716|ref|XP_003775951.1| PREDICTED: poly(rC)-binding protein 1 isoform 2 [Pongo abelii]
gi|395841306|ref|XP_003793486.1| PREDICTED: poly(rC)-binding protein 1 [Otolemur garnettii]
gi|402891162|ref|XP_003908824.1| PREDICTED: poly(rC)-binding protein 1 [Papio anubis]
gi|410954989|ref|XP_003984141.1| PREDICTED: poly(rC)-binding protein 1 [Felis catus]
gi|426223390|ref|XP_004005858.1| PREDICTED: poly(rC)-binding protein 1 [Ovis aries]
gi|426335835|ref|XP_004029412.1| PREDICTED: poly(rC)-binding protein 1 [Gorilla gorilla gorilla]
gi|12230408|sp|O19048.1|PCBP1_RABIT RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42559420|sp|P60335.1|PCBP1_MOUSE RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42560548|sp|Q15365.2|PCBP1_HUMAN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding
protein SUB2.3
gi|75040221|sp|Q5E9A3.1|PCBP1_BOVIN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1
gi|2134737|pir||S58529 alpha-complex protein 1 - human
gi|5805273|gb|AAD51920.1|AF139894_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|5805275|gb|AAD51921.1|AF139895_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|1215671|gb|AAA91317.1| alpha-CP1 [Homo sapiens]
gi|2644966|emb|CAA05814.1| hnRNP-E1 protein [Oryctolagus cuniculus]
gi|13435897|gb|AAH04793.1| Poly(rC) binding protein 1 [Mus musculus]
gi|24980783|gb|AAH39742.1| Poly(rC) binding protein 1 [Homo sapiens]
gi|47124405|gb|AAH69915.1| Poly(rC) binding protein 1 [Mus musculus]
gi|59858399|gb|AAX09034.1| poly(rC) binding protein 1 [Bos taurus]
gi|62702265|gb|AAX93191.1| unknown [Homo sapiens]
gi|119620240|gb|EAW99834.1| poly(rC) binding protein 1 [Homo sapiens]
gi|148666767|gb|EDK99183.1| mCG130511 [Mus musculus]
gi|189054893|dbj|BAG36897.1| unnamed protein product [Homo sapiens]
gi|208968661|dbj|BAG74169.1| poly(rC) binding protein 1 [synthetic construct]
gi|281346699|gb|EFB22283.1| hypothetical protein PANDA_002891 [Ailuropoda melanoleuca]
gi|296482414|tpg|DAA24529.1| TPA: poly(rC)-binding protein 1 [Bos taurus]
gi|312151908|gb|ADQ32466.1| poly(rC) binding protein 1 [synthetic construct]
gi|344250809|gb|EGW06913.1| Poly(rC)-binding protein 1 [Cricetulus griseus]
gi|355565760|gb|EHH22189.1| hypothetical protein EGK_05412 [Macaca mulatta]
gi|355751386|gb|EHH55641.1| hypothetical protein EGM_04885 [Macaca fascicularis]
gi|380813262|gb|AFE78505.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|380813264|gb|AFE78506.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|383418769|gb|AFH32598.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384940310|gb|AFI33760.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384947378|gb|AFI37294.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|410262902|gb|JAA19417.1| poly(rC) binding protein 1 [Pan troglodytes]
gi|431912608|gb|ELK14626.1| Poly(rC)-binding protein 1 [Pteropus alecto]
gi|444723406|gb|ELW64063.1| Poly(rC)-binding protein 1 [Tupaia chinensis]
Length = 356
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 331
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 332 SAASISLAQYLINARLSSE 350
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>gi|410355313|gb|JAA44260.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 275 DASTQTTHELTIPNNLIGYIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 331
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 332 SAASISLAQYLINARLSSE 350
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGYIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>gi|440907813|gb|ELR57910.1| Poly(rC)-binding protein 1 [Bos grunniens mutus]
Length = 356
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ GS IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGSNINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ G+ I S A IKI+ + G + R VT+TG
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGSNINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 331
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 332 SAASISLAQYLINARLSSE 350
>gi|393236643|gb|EJD44191.1| eukaryotic type KH-domain (KH-domain type I) [Auricularia delicata
TFB-10046 SS5]
Length = 450
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 111/211 (52%), Gaps = 30/211 (14%)
Query: 11 SPDVHGKRSTAPVK--SLSSDPTEKPT-------YIRFLVSNPLAGAVIGKGGSTINDFQ 61
+PD +GK S+ P K S++P+ KPT ++R L+ A +IGKGG+ +N+ +
Sbjct: 65 APDANGKPSSVPAKPEGASTNPS-KPTAPTGAMIHMRCLIVTQDASIIIGKGGAHVNEIR 123
Query: 62 SQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV--- 118
+SGAR+ +S E PG +RI+ +SG +D + +A L++ ++ D+ DV
Sbjct: 124 EKSGARVVVS---ESIPGNPERILNVSGPLDAVSKAFGLIVRRI------NDEPFDVPSV 174
Query: 119 -GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
G++ ++ ++PNS GS+IGK G IK + S A + S + G +R++++ G
Sbjct: 175 PGSRAVTIKFMIPNSRMGSVIGKGGVKIKEIQEASGARLNAS--EGVLPGSTERVLSVAG 232
Query: 177 TLDEQMRALELILLKLSEDTLYSQTMTVPYT 207
D A+ + + L +Q P++
Sbjct: 233 VAD----AIHIATYYIGNILLEAQAHGGPHS 259
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR---SHEFFPGTTDRIIMISGTIDEI 94
+ + N L G +IGKGGS IN+ + S + I++ + + G +R++ I+G I
Sbjct: 366 QIFIPNDLVGCIIGKGGSKINEIRHLSASAIKIMEPGVAGDAGGGPNERLVTITGAPHNI 425
Query: 95 LRAVDLVIDKLLTE 108
AV L+ +L E
Sbjct: 426 QMAVSLLYQRLEQE 439
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR---LDHSYYGLNDRLVTLTGTLDEQ 181
++ +PN G IIGK G+ I S + IKI + G N+RLVT+TG
Sbjct: 366 QIFIPNDLVGCIIGKGGSKINEIRHLSASAIKIMEPGVAGDAGGGPNERLVTITGAPHNI 425
Query: 182 MRALELILLKLSED 195
A+ L+ +L ++
Sbjct: 426 QMAVSLLYQRLEQE 439
>gi|57093423|ref|XP_538537.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Canis lupus
familiaris]
Length = 356
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 331
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 332 SAASISLAQYLINARLSSE 350
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>gi|410227970|gb|JAA11204.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 331
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 332 SAASISLAQYLINARLSSE 350
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T+ + N L G +IG+ G+ IN+ + SGA+I+++ E G++ R + I+
Sbjct: 275 DASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE---GSSGRQVTIT 330
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 331 GSAASISLAQYLINARLSSE 350
>gi|449265657|gb|EMC76819.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 343
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 98/187 (52%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S +RI+ I+G D I +
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGS-----CPERIVTITGPTDAIFK 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K +++A V +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 74 AFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 134 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 187
Query: 209 AGVFFSG 215
A + F+G
Sbjct: 188 APIIFAG 194
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 97 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGT 154
Query: 91 IDEILRAVDLVIDKLL 106
D I++ V + +L
Sbjct: 155 PDAIIQCVKQICVVML 170
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D T + + N L G +IG+ GS IN+ + SGA+I+++ + E G+ +R + I+
Sbjct: 271 DATTPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATE---GSAERQVTIT 327
Query: 89 GT 90
G+
Sbjct: 328 GS 329
>gi|395526246|ref|XP_003765279.1| PREDICTED: RNA-binding protein Nova-2 [Sarcophilus harrisii]
Length = 233
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 30/170 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 36 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT-AEAL 94
Query: 96 RAVDLVIDKLLTE----------------------------LHAEDQADDVGTKTKLRLI 127
AV I + + E L AE A + K + +
Sbjct: 95 NAVHSFIAEKVREIPQAMAKPEVASILQPQTTMNPDRAKQFLAAEKLAAE-SAKELVEIA 153
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
VP + G+I+GK G T+ + + + A I+IS+ G +R VT+TG+
Sbjct: 154 VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 203
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
R V L +++L E++ + + + + L++++P+ + GSIIGK G TI ++ A I
Sbjct: 12 RPVGLCENQVLVEIYEKKREEG---EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATI 68
Query: 156 KISRLDHSYYGLNDRLVTLTGTLD 179
K+S+ Y G +R+ + GT +
Sbjct: 69 KLSKSKDFYPGTTERVCLVQGTAE 92
>gi|351712813|gb|EHB15732.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 15 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 69
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 70 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 129
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 130 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 182
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 89 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 146
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 147 IAGVPQSVTECVKQICLVMLETLSQ 171
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R +T+TG
Sbjct: 274 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQITITG 330
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 331 SAASISLAQYLINARLSSE 349
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 263 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 314
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R I I+G+ I A L+ +L +E
Sbjct: 315 ANPVE---GSSGRQITITGSAASISLAQYLINARLSSE 349
>gi|324506586|gb|ADY42808.1| RNA-binding protein Nova-2 [Ascaris suum]
Length = 565
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 109/197 (55%), Gaps = 13/197 (6%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
E+ ++ L+ + GA+IGKGG T+ +++SG R+Q+S++ E + GT +RI ++ G
Sbjct: 63 NEESVQVKILIPSAAVGAIIGKGGETMRSLKNESGCRLQMSKNQEVYHGTNERICLVKGK 122
Query: 91 IDEILRAVDLVIDKLLTELHAEDQAD-----DVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
I +++ V++V++K+ ++ D V +++L+VPN+S G +IGK+GA IK
Sbjct: 123 IASVMKVVEVVMEKIKEKVDPNTPCDVYDHKGVDRTKEMKLLVPNTSAGMVIGKSGARIK 182
Query: 146 SFMDDSQAVIKI---SRLDHSYYGLNDRLVTLTG-TLDEQMRALELILLKLSEDTLYSQT 201
D + A I++ + + L +R++T+ D M A++ +L K++ D ++
Sbjct: 183 EIRDQTGANIQVYPKAGSQEAKVSL-ERVITIAADDSDVLMNAIQRVLEKVAADPQHASA 241
Query: 202 MTVPYTYAGVFFSGFHG 218
+ A F G HG
Sbjct: 242 IEHKELEA---FGGLHG 255
>gi|311252459|ref|XP_003125105.1| PREDICTED: poly(rC)-binding protein 1-like [Sus scrofa]
Length = 356
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 331
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 332 SAASISLAQYLINARLSSE 350
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>gi|326496260|dbj|BAJ94592.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 689
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 90/183 (49%), Gaps = 26/183 (14%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + N G +IGK G TI Q+QSGA+IQ++R + PG+ R + ISGT D+I
Sbjct: 143 TTKKIDIPNGRVGVIIGKAGETIKHLQAQSGAKIQVTRDMDVQPGSQTRSVDISGTPDQI 202
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVP------------NSSCGSIIGKAGA 142
RA L+ID L AE A GT + + P N+ G +IGK G
Sbjct: 203 SRAEQLIIDVL-----AEADAGSSGTISNRKYNAPQPGAEQFQMQIANNKVGLVIGKGGE 257
Query: 143 TIKSFMDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
TIKS SQA I++ L D S +R + + GT ++ A +L+ SE+
Sbjct: 258 TIKSMQAKSQARIQVIPLHLPPGDTS----TERTLYIDGTAEQIEIAKQLVSEVTSENRA 313
Query: 198 YSQ 200
+Q
Sbjct: 314 RNQ 316
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+ TK ++ +PN G IIGKAG TIK S A I+++R G R V ++GT
Sbjct: 141 GSTTK-KIDIPNGRVGVIIGKAGETIKHLQAQSGAKIQVTRDMDVQPGSQTRSVDISGTP 199
Query: 179 DEQMRALELILLKLSE 194
D+ RA +LI+ L+E
Sbjct: 200 DQISRAEQLIIDVLAE 215
>gi|384947380|gb|AFI37295.1| poly(rC)-binding protein 1 [Macaca mulatta]
Length = 358
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 275 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 331
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 332 GSAASISLAQYLINVRLSSE 351
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 275 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 331
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 332 GSAASISLAQYLINVRLSSET 352
>gi|410899813|ref|XP_003963391.1| PREDICTED: poly(rC)-binding protein 4-like [Takifugu rubripes]
Length = 447
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +S AR+ +S +RII I+G+ D + R
Sbjct: 18 LRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGS-----CPERIITITGSTDCVFR 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ KL +L A + TK LRL++P S CGS+IGK GA IK + + A
Sbjct: 73 AFTMITHKLEEDLAALVANGTISTKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQ 132
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
I+++ L +S +R VT++G D ++ ++LI + E + T+PY +
Sbjct: 133 IQVAGDLLPNS----TERGVTISGNQDSVIQCVKLICTVILESP--PKGATIPYRPSPSP 186
Query: 209 AGVFFSG 215
A V +G
Sbjct: 187 AAVLIAG 193
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T+ P +R ++ G++IGKGG+ I + + +GA+IQ+ + + P +T+R + ISG
Sbjct: 96 TKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQV--AGDLLPNSTERGVTISGN 153
Query: 91 IDEILRAVDLVIDKLL 106
D +++ V L+ +L
Sbjct: 154 QDSVIQCVKLICTVIL 169
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+G LRL++ GSIIGK G T+K ++S A R++ S +R++T+TG+
Sbjct: 12 LGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSA-----RVNISEGSCPERIITITGS 66
Query: 178 LDEQMRALELILLKLSED 195
D RA +I KL ED
Sbjct: 67 TDCVFRAFTMITHKLEED 84
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI-SRLDHSYYGLNDRLVTLT 175
D ++T L++PN GSIIG+ G I S A IKI S+LD G +DR VT+T
Sbjct: 262 DSNSQTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLD----GTSDRHVTIT 317
Query: 176 GTLDEQMRALELI--LLKLSEDTLYSQTMTVP 205
GT A LI L+ ++ T + T+ P
Sbjct: 318 GTPVSINLAQYLITSCLETAKSTAQAATLAAP 349
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T L+ N L G++IG+ G+ IN+ + SGA+I++ + GT+DR + I+GT I
Sbjct: 267 TSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLD---GTSDRHVTITGTPVSI 323
Query: 95 LRAVDLVIDKLLT 107
A L+ L T
Sbjct: 324 NLAQYLITSCLET 336
>gi|302775686|ref|XP_002971260.1| hypothetical protein SELMODRAFT_171892 [Selaginella moellendorffii]
gi|300161242|gb|EFJ27858.1| hypothetical protein SELMODRAFT_171892 [Selaginella moellendorffii]
Length = 465
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R V N G VIGKGG TI Q QSGA+IQ++R E PG R + ++GT ++I RA
Sbjct: 133 RVDVPNTKVGLVIGKGGETIRTLQQQSGAKIQVTRDAEADPGAVTRQVELTGTPEQISRA 192
Query: 98 VDL---VIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
L V+ G + + VPN+ G IIGK G TI++ S A
Sbjct: 193 EQLIREVVGDQGIVGGPVGGGGTGGVGDPIHVRVPNNKVGLIIGKGGETIRNLQQTSGAR 252
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
I++ + G +R+VTL GT + A ++I + E
Sbjct: 253 IQVQHDRETEPGATERIVTLVGTKQQTDIATDMIKDVIGE 292
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I V N G +IGKGG TI + Q SGARIQ+ E PG T+RI+ + GT +
Sbjct: 222 IHVRVPNNKVGLIIGKGGETIRNLQQTSGARIQVQHDRETEPGATERIVTLVGTKQQTDI 281
Query: 97 AVDLVID 103
A D++ D
Sbjct: 282 ATDMIKD 288
>gi|302756263|ref|XP_002961555.1| hypothetical protein SELMODRAFT_437890 [Selaginella moellendorffii]
gi|300170214|gb|EFJ36815.1| hypothetical protein SELMODRAFT_437890 [Selaginella moellendorffii]
Length = 471
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R V N G VIGKGG TI Q QSGA+IQ++R E PG R + ++GT ++I RA
Sbjct: 133 RVDVPNTKVGLVIGKGGETIRTLQQQSGAKIQVTRDAEADPGAVTRQVELTGTPEQISRA 192
Query: 98 VDL---VIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
L V+ + + VPN+ G IIGK G TI++ S A
Sbjct: 193 EQLIREVVGDQGIVGGPVGGGGTGSVGDPIHVRVPNNKVGLIIGKGGETIRNLQQTSGAR 252
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
I++ + G +R+VTL GT + A ++I + E
Sbjct: 253 IQVQHDRETEPGATERIVTLVGTKQQTDIATDMIKDVIGE 292
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I V N G +IGKGG TI + Q SGARIQ+ E PG T+RI+ + GT +
Sbjct: 222 IHVRVPNNKVGLIIGKGGETIRNLQQTSGARIQVQHDRETEPGATERIVTLVGTKQQTDI 281
Query: 97 AVDLVID 103
A D++ D
Sbjct: 282 ATDMIKD 288
>gi|168026870|ref|XP_001765954.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682860|gb|EDQ69275.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 770
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 83/164 (50%), Gaps = 8/164 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ V N G VIGKGG TI Q QSGARIQ++R E P ++ R + + GT ++I RA
Sbjct: 311 KIEVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGESDPRSSTRQVELMGTPEQISRA 370
Query: 98 VDLVIDKLLTELHA-------EDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
LV D ++ E ++ ++++ VPN+ G IIG+ G TIKS
Sbjct: 371 EQLVKD-VIAEASTGAPGGAFGGRSFGGHGGEQVQIKVPNNKVGLIIGRGGETIKSLQSR 429
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
S A I++ + G +R+VTL G A ELI + E
Sbjct: 430 SGARIQVQNDSETEPGATERVVTLIGIKKVTDMAYELIKEVIDE 473
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDE 93
++ V N G +IG+GG TI QS+SGARIQ+ E PG T+R++ + G D
Sbjct: 403 VQIKVPNNKVGLIIGRGGETIKSLQSRSGARIQVQNDSETEPGATERVVTLIGIKKVTDM 462
Query: 94 ILRAVDLVIDKLLTEL 109
+ VID+L L
Sbjct: 463 AYELIKEVIDELAASL 478
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G ++ VPNS G +IGK G TIK S A I+++R S + R V L GT
Sbjct: 305 GPHESRKIEVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGESDPRSSTRQVELMGTP 364
Query: 179 DEQMRALELILLKLSE 194
++ RA +L+ ++E
Sbjct: 365 EQISRAEQLVKDVIAE 380
>gi|307105952|gb|EFN54199.1| hypothetical protein CHLNCDRAFT_31755 [Chlorella variabilis]
Length = 282
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 60/80 (75%), Gaps = 3/80 (3%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT---TDRIIMIS 88
E+ ++FLV N AG++IGK G+ I + Q+QS AR+QLSR++EF+PG+ DRI+++S
Sbjct: 46 EERVVVKFLVPNVAAGSIIGKSGANITEIQTQSNARMQLSRANEFYPGSPEGQDRILLVS 105
Query: 89 GTIDEILRAVDLVIDKLLTE 108
GT++++L A+ LV+ KL E
Sbjct: 106 GTVNQLLTALHLVLSKLKAE 125
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 20/138 (14%)
Query: 112 EDQADDVGTKTKLRLIV----PNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL 167
E+ D G + R++V PN + GSIIGK+GA I S A +++SR + Y G
Sbjct: 35 EETGSDAGGSREERVVVKFLVPNVAAGSIIGKSGANITEIQTQSNARMQLSRANEFYPGS 94
Query: 168 ---NDRLVTLTGTLDEQMRALELILLKL---SEDTLYSQTMTVPYTYAGVFFSGFHGMPY 221
DR++ ++GT+++ + AL L+L KL SE+ Y +Y+ +
Sbjct: 95 PEGQDRILLVSGTVNQLLTALHLVLSKLKAESENPDYHLLTDANLSYSTRYSP------- 147
Query: 222 GAVPPP---VPAVPHNTA 236
GA PPP PA P + A
Sbjct: 148 GASPPPQQYTPAPPAHMA 165
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
G VIGK G+ IN + G I++S+ EF PG+ DR I+GT + + A L+ K+
Sbjct: 218 GVVIGKQGAVINQIKELLGVSIRISKKGEFLPGSHDRACSITGTPEAVEIAQRLIQQKI 276
>gi|449274935|gb|EMC83962.1| Poly(rC)-binding protein 4 [Columba livia]
Length = 324
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 23/217 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ D + R
Sbjct: 25 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG-----SCPERITTITGSTDAVFR 79
Query: 97 AVDLVIDKLLTELHAEDQADDVG-TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
AV ++ KL +L A VG + LRL++P S CGS+IGKAGA I+ + + A +
Sbjct: 80 AVSMIAFKLEEDLGAGSDGAAVGRSPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQV 139
Query: 156 KISR--LDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPYTYA- 209
+++ L +S +R VT++G T+ +R + ++L++ ++ P+ +
Sbjct: 140 QVAGDLLPNS----TERAVTVSGVPDTIIHCVRQICAVILEVPTESPTQAWGAFPHQHGY 195
Query: 210 ---GVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNM 243
+ S P PP PAV H+ P M
Sbjct: 196 LPPKMTLSLISWSPCTHQSPPNPAV----GKHWHPIM 228
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 105 PVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQV--AGDLLPNSTERAVTVSGVPDT 162
Query: 94 ILRAVDLVIDKLL 106
I+ V + +L
Sbjct: 163 IIHCVRQICAVIL 175
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + + FLV N L G +IG+ GS I++ + SGA I++ E G+++R + I+
Sbjct: 252 DTSSQNSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIGNQTE---GSSERHVTIT 308
Query: 89 GT 90
G+
Sbjct: 309 GS 310
>gi|395333911|gb|EJF66288.1| hypothetical protein DICSQDRAFT_159257 [Dichomitus squalens
LYAD-421 SS1]
Length = 405
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 89/162 (54%), Gaps = 8/162 (4%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
STAP + S ++R L+ A +IGKGGS +N+ + +SGAR+ +S E P
Sbjct: 85 STAPGGTGSGSTPAANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVS---ESIP 141
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSII 137
G +RI+ +SG +D + +A L++ ++ E D+ G++ ++ ++PNS GS+I
Sbjct: 142 GNPERILNVSGPLDAVSKAFGLIVRRINDEPF--DKPSVPGSRAVTIKFMIPNSRMGSVI 199
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
GK G IK D S A + S + G +RL++++G D
Sbjct: 200 GKGGTKIKEIQDASGARLNAS--EGMLPGSTERLLSVSGVAD 239
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 62/232 (26%)
Query: 23 VKSLSSDPTEKPTY-------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
V+ ++ +P +KP+ I+F++ N G+VIGKGG+ I + Q SGAR L+ S
Sbjct: 165 VRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGAR--LNASEG 222
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADD------------------ 117
PG+T+R++ +SG D I A I +L E + + +
Sbjct: 223 MLPGSTERLLSVSGVADAIHIAT-YYIGNILIEANERMPSSNHSTYRPTSQSRRPPYMGS 281
Query: 118 ---------------------VGTKTKL---RLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
G ++L ++ +PN G IIGK GA I S +
Sbjct: 282 SYVPGYAPAAAAAATAHNPYAGGPPSQLQTQQIYIPNDLVGCIIGKGGAKINEIRHMSAS 341
Query: 154 VIKISRLDHSYYGLN----------DRLVTLTGTLDEQMRALELILLKLSED 195
IKI G+N +RLV +TG A++L+ +L ++
Sbjct: 342 QIKIMEPGAVGVGMNGAPAPAGSEGERLVVITGQPANIQMAVQLLYSRLEQE 393
>gi|195128219|ref|XP_002008562.1| GI13561 [Drosophila mojavensis]
gi|193920171|gb|EDW19038.1| GI13561 [Drosophila mojavensis]
Length = 362
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 13/189 (6%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S AP+K DP+ T IR ++ G++IGK G +N F+ +SGA+I +S
Sbjct: 11 SGAPIKL--EDPSVTLT-IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS---- 63
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG-TKTKLRLIVPNSSCGSII 137
+RI+ +SGT + I A L+ K + VG T+ +RLIVP S CGS+I
Sbjct: 64 -CPERIVTVSGTTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLI 122
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
GK+G+ IK + I+++ +R VTL+G+ ++ + + I L + E
Sbjct: 123 GKSGSKIKEIRQTTGCSIQVA--SEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESP- 179
Query: 198 YSQTMTVPY 206
+ T+PY
Sbjct: 180 -PRGATIPY 187
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A
Sbjct: 270 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 329
Query: 99 DLV 101
L+
Sbjct: 330 YLI 332
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 270 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 329
Query: 186 ELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
LI +++S +T AG+ G+H
Sbjct: 330 YLINMRISMET------------AGLPIPGYH 349
>gi|148229933|ref|NP_001086212.1| MGC84166 protein [Xenopus laevis]
gi|49256273|gb|AAH74333.1| MGC84166 protein [Xenopus laevis]
Length = 225
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG 215
A V F+G
Sbjct: 185 APVIFAG 191
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
>gi|432865686|ref|XP_004070563.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 467
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +S AR+ +S +RII I+G+ D + R
Sbjct: 29 LRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGS-----CPERIITITGSTDSVFR 83
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ KL +L A + +K LRL++P S CGS+IGK GA IK + + A
Sbjct: 84 AFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQ 143
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
I+++ L +S +R VT++G D ++ ++LI + E + T+PY
Sbjct: 144 IQVAGDLLPNS----TERGVTISGNQDSVIQCVKLICTVILESP--PKGATIPY 191
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+G LRL++ GSIIGK G T+K ++S A + IS +R++T+TG+
Sbjct: 23 LGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE-----GSCPERIITITGS 77
Query: 178 LDEQMRALELILLKLSED 195
D RA +I KL ED
Sbjct: 78 TDSVFRAFTMITYKLEED 95
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
++SS P P +R ++ G++IGKGG+ I + + +GA+IQ+ + + P +T+R
Sbjct: 104 TISSKP---PVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQV--AGDLLPNSTERG 158
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISG D +++ V L+ +L
Sbjct: 159 VTISGNQDSVIQCVKLICTVIL 180
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 104 KLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI-SRLDH 162
KLL LH D ++T L++PN GSIIG+ G I S A IKI S+LD
Sbjct: 271 KLL--LHFLPSGMDSTSQTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLD- 327
Query: 163 SYYGLNDRLVTLTGTLDEQMRALELI--LLKLSEDTLYSQTMTVP 205
G +DR VT+TGT A LI L+ ++ T + TM P
Sbjct: 328 ---GTSDRHVTITGTPVSINLAQYLITSCLETAKSTAQAATMPSP 369
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T L+ N L G++IG+ G+ IN+ + SGA+I++ + GT+DR + I+GT I
Sbjct: 287 TSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLD---GTSDRHVTITGTPVSI 343
Query: 95 LRAVDLVIDKLLT 107
A L+ L T
Sbjct: 344 NLAQYLITSCLET 356
>gi|449473856|ref|XP_004186185.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC) binding protein 4
[Taeniopygia guttata]
Length = 245
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 14/185 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ D + R
Sbjct: 25 LRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEGS-----CPERITTITGSTDAVFR 79
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK-TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
AV ++ KL +L A G LRL++P S CGS+IGKAGA I+ + + A +
Sbjct: 80 AVSMIAFKLEEDLGAGGDGVSAGRAPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQV 139
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
+++ L +S +R VT++G D ++ + I L S + SQ VP G
Sbjct: 140 QVAGDLLPNS----TERAVTVSGVPDTIIQCVRQICLDPSSQS-SSQEFLVPNDLIGCII 194
Query: 214 SGFHG 218
G HG
Sbjct: 195 -GRHG 198
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 17/144 (11%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 105 PVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQV--AGDLLPNSTERAVTVSGVPDT 162
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
I++ V + D + +VPN G IIG+ G+ I S A
Sbjct: 163 IIQCVRQIC------------LDPSSQSSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGA 210
Query: 154 VIKISRLDHSYYGLNDRLVTLTGT 177
IKI + G ++R VT+TGT
Sbjct: 211 HIKIG---NQTEGSSERHVTITGT 231
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V+ + DP+ + + FLV N L G +IG+ GS I++ + SGA I++ E G+++
Sbjct: 167 VRQICLDPSSQSSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIGNQTE---GSSE 223
Query: 83 RIIMISGT 90
R + I+GT
Sbjct: 224 RHVTITGT 231
>gi|195440454|ref|XP_002068057.1| GK10610 [Drosophila willistoni]
gi|194164142|gb|EDW79043.1| GK10610 [Drosophila willistoni]
Length = 363
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 19/190 (10%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP+K DP+ T IR ++ G++IGK G +N F+ +SGA+I +S
Sbjct: 13 APIKH--EDPSVTLT-IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----C 64
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSI 136
+RI+ +SGT I A L+ K Q +DVG T+ +RLIVP S CGS+
Sbjct: 65 PERIVTVSGTTSAIFSAFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCGSL 121
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
IGK+G+ IK + I+++ +R VTL+G+ ++ + + I L + E
Sbjct: 122 IGKSGSKIKEIRQTTGCSIQVA--SEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESP 179
Query: 197 LYSQTMTVPY 206
+ T+PY
Sbjct: 180 --PRGATIPY 187
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A
Sbjct: 271 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 330
Query: 99 DLV 101
L+
Sbjct: 331 YLI 333
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 271 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 330
Query: 186 ELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
LI +++S +T AG+ G+H
Sbjct: 331 YLINMRISMET------------AGLPIPGYH 350
>gi|299471031|emb|CBN78891.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 737
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 13/190 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ LVSN +AG +IGKGG+ I + + + A I+++ + F+PGT +R++++ G +
Sbjct: 69 LKLLVSNSMAGTLIGKGGTRICEIKDECLADIKVTPNGRFYPGTHERVVLVVGEPGSVQM 128
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ-AVI 155
A D ++ + T A D R+++P+++ G IIG G + + A I
Sbjct: 129 ACDRIVTTIYT-------AADTSLDITQRVLIPDAASGLIIGHDGVRLGDLRQQAGVASI 181
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
++S D +R+VTL G + + L LI+ ++ EDT S+ + Y V
Sbjct: 182 QVSPRDMCTV-AGERVVTLQGPMSSVIHGLTLIVDRMMEDTTASRYQNMSTIYRAVH--- 237
Query: 216 FHGMPYGAVP 225
H PY AVP
Sbjct: 238 LHLPPY-AVP 246
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G ++GKGG+T+ + Q SGA+I ++R +EF PGT R++ ++G + A L++ K+
Sbjct: 672 GIILGKGGATVRELQQLSGAKIMIARRNEFMPGTKHRLVTLAGAPLAVNMARFLIMRKIQ 731
Query: 107 TE 108
TE
Sbjct: 732 TE 733
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L VP++ G I+GK GAT++ S A I I+R + G RLVTL G A
Sbjct: 664 LPVPDADVGIILGKGGATVRELQQLSGAKIMIARRNEFMPGTKHRLVTLAGAPLAVNMAR 723
Query: 186 ELILLKLSED 195
LI+ K+ +
Sbjct: 724 FLIMRKIQTE 733
>gi|326511423|dbj|BAJ87725.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 329
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 29/193 (15%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E+PT+ R LVS+ AG + G+ GS ++ + SGA I++S P T R++ +SG
Sbjct: 27 ERPTHARILVSDADAGCIYGRAGSAVHAMDAGSGANIKISAGGRPLPATDRRVVFVSGLF 86
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCG----------------- 134
++ A DLV+ KL + DQ D + L+VP+ S
Sbjct: 87 PAVMDAADLVLQKLF---YLGDQVIDA--DATVVLVVPDDSYNLHSLPVLMPNIDVLQMN 141
Query: 135 ----SIIGKAGATIK--SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
++ G + SF ++S I +S YG +DRLVT+TG LD Q++A+ LI
Sbjct: 142 CMVYALHSTKGPRERAMSFAEESNTRIMVSPY-AICYGFHDRLVTITGHLDNQLQAIFLI 200
Query: 189 LLKLSEDTLYSQT 201
+ +L +D YS +
Sbjct: 201 VSELLDDVRYSSS 213
>gi|390458234|ref|XP_003732080.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
Length = 349
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 96/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S ++ +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TEQAITIAGMPQSVTECVKQICLVMLETISQSPQGRVMTIPY 183
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T++ I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQVQV--AGDMLPNSTEQAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + +++
Sbjct: 148 IAGMPQSVTECVKQICLVMLETISQ 172
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ G I S A IKI+ + G + R VT+TG
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 331
Query: 177 TLDEQMRALELILLKLS 193
+ A LI KLS
Sbjct: 332 SAASISLAQYLINAKLS 348
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ E G++ R + I+G+ I A L+ KL
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINAKL 347
>gi|195377361|ref|XP_002047459.1| GJ11921 [Drosophila virilis]
gi|194154617|gb|EDW69801.1| GJ11921 [Drosophila virilis]
Length = 589
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 23/194 (11%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S AP+K DP+ T IR ++ G++IGK G +N F+ +SGA+I +S
Sbjct: 11 SGAPIKL--EDPSVTLT-IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS---- 63
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCG 134
+RI+ +SGT + I A L+ K Q +DVG T+ +RLIVP S CG
Sbjct: 64 -CPERIVTVSGTTNAIFSAFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCG 119
Query: 135 SIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
S+IGK+G+ IK + I+++ L +S +R VTL+G+ ++ + + I L +
Sbjct: 120 SLIGKSGSKIKEIRQTTGCSIQVASEMLPNS----TERAVTLSGSAEQITQCIYQICLVM 175
Query: 193 SEDTLYSQTMTVPY 206
E + T+PY
Sbjct: 176 LESP--PRGATIPY 187
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A
Sbjct: 269 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 328
Query: 98 VDLV-IDKLLTELHAEDQA 115
L+ + L + + +DQA
Sbjct: 329 QYLINMSVELQKANLQDQA 347
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 269 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 328
Query: 185 LELILLKL 192
LI + +
Sbjct: 329 QYLINMSV 336
>gi|348503027|ref|XP_003439068.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 446
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +S AR+ +S +RII I+G+ D + R
Sbjct: 18 LRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGS-----CPERIITITGSTDSVFR 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ KL +L A + +K LRL++P S CGS+IGK GA IK + + A
Sbjct: 73 AFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQ 132
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
I+++ L +S +R VT++G D ++ ++LI + E + T+PY
Sbjct: 133 IQVAGDLLPNS----TERGVTISGNQDSVIQCVKLICTVILESP--PKGATIPY 180
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
++SS P P +R ++ G++IGKGG+ I + + +GA+IQ+ + + P +T+R
Sbjct: 93 TISSKP---PVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQV--AGDLLPNSTERG 147
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISG D +++ V L+ +L
Sbjct: 148 VTISGNQDSVIQCVKLICTVIL 169
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+G LRL++ GSIIGK G T+K ++S A R++ S +R++T+TG+
Sbjct: 12 LGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSA-----RVNISEGSCPERIITITGS 66
Query: 178 LDEQMRALELILLKLSED 195
D RA +I KL ED
Sbjct: 67 TDSVFRAFTMITYKLEED 84
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI-SRLDHSYYGLNDRLVTLT 175
D ++T L++PN GSIIG+ G I S A IKI S+LD G +DR VT+T
Sbjct: 261 DSNSQTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLD----GTSDRHVTIT 316
Query: 176 GT 177
GT
Sbjct: 317 GT 318
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T L+ N L G++IG+ G+ IN+ + SGA+I++ GT+DR + I+GT I
Sbjct: 266 TSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQ---LDGTSDRHVTITGTPVSI 322
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGTKTKLRL 126
A L+ L T + QA +G+ L +
Sbjct: 323 NLAQYLITSCLETA-KSTAQAASMGSPVDLNM 353
>gi|260829253|ref|XP_002609576.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
gi|229294938|gb|EEN65586.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
Length = 408
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 17/183 (9%)
Query: 30 PTEKPTY---IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
P E P+ IR ++ G++IGK G TI F+ +SGARI +S + +RI+
Sbjct: 12 PGEAPSVTLTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISDGS-----SPERIVT 66
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK-TKLRLIVPNSSCGSIIGKAGATIK 145
I+G+ + IL+A +++ K ++ A V LRLIVP S CGS+IGK G+ IK
Sbjct: 67 ITGSTENILKAFNMIGKKFEEDMKAAHVNSSVPVPPVTLRLIVPASQCGSLIGKGGSKIK 126
Query: 146 SFMDDSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+ + A I+++ L +S +R VT++GT D + + I + E + T
Sbjct: 127 EIREVTGASIQVAGDMLPNS----TERAVTVSGTPDAISQCVYHICCVMLESP--PKGAT 180
Query: 204 VPY 206
+PY
Sbjct: 181 IPY 183
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IGKGG IN+ + SGA I+++ E G+TDR + I+GT + I A
Sbjct: 249 ELTIPNELIGCIIGKGGCKINEIRQCSGATIKIAGMQE---GSTDRQVTITGTPESISMA 305
Query: 98 VDLV 101
L+
Sbjct: 306 QFLI 309
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
L +PN G IIGK G I S A IKI+ + G DR VT+TGT
Sbjct: 249 ELTIPNELIGCIIGKGGCKINEIRQCSGATIKIAGMQE---GSTDRQVTITGT 298
>gi|386771595|ref|NP_001246876.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
gi|383292067|gb|AFH04547.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
Length = 433
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 16/174 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG-----SCPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K Q +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
I+++ +R VTL+G+ ++ + + I L + E + T+PY
Sbjct: 138 CSIQVA--SEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESP--PRGATIPY 187
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A
Sbjct: 340 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 399
Query: 98 VDLV 101
L+
Sbjct: 400 QYLI 403
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 340 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 399
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
LI +++S +T AG+ G+H
Sbjct: 400 QYLINMRISMET------------AGLPIPGYH 420
>gi|45553235|ref|NP_996145.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|194876029|ref|XP_001973701.1| GG16232 [Drosophila erecta]
gi|195496648|ref|XP_002095782.1| GE22592 [Drosophila yakuba]
gi|16648354|gb|AAL25442.1| LD32520p [Drosophila melanogaster]
gi|45446078|gb|AAS65095.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|190655484|gb|EDV52727.1| GG16232 [Drosophila erecta]
gi|194181883|gb|EDW95494.1| GE22592 [Drosophila yakuba]
gi|220951950|gb|ACL88518.1| mub-PC [synthetic construct]
Length = 364
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 16/174 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K Q +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
I+++ +R VTL+G+ ++ + + I L + E + T+PY
Sbjct: 138 CSIQVA--SEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESP--PRGATIPY 187
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A
Sbjct: 272 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 331
Query: 99 DLV 101
L+
Sbjct: 332 YLI 334
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 272 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 331
Query: 186 ELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
LI +++S +T AG+ G+H
Sbjct: 332 YLINMRISMET------------AGLPIPGYH 351
>gi|331232797|ref|XP_003329060.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308050|gb|EFP84641.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 378
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 84/148 (56%), Gaps = 16/148 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ A +IGKGG IN+ + +SGAR +S E PG +RI+ ++G +D + +
Sbjct: 108 MRALIVTQDASIIIGKGGRHINEVREKSGARATIS---EAVPGNAERILSVAGPLDAVSK 164
Query: 97 AVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
A L++ ++ D+ DV G++ +R IVPNS GS+IGKAG+ IK D S
Sbjct: 165 AFGLIVRRI------NDEPFDVPSVPGSRAVTIRFIVPNSRMGSVIGKAGSKIKEIQDMS 218
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLD 179
A ++ S + G +R+++++G D
Sbjct: 219 GARVQAS--EALLPGSTERVLSISGVAD 244
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+ S P + IRF+V N G+VIGK GS I + Q SGAR+Q S + PG+T+R++
Sbjct: 180 VPSVPGSRAVTIRFIVPNSRMGSVIGKAGSKIKEIQDMSGARVQASEA--LLPGSTERVL 237
Query: 86 MISGTIDEILRAV 98
ISG D + AV
Sbjct: 238 SISGVADAVHIAV 250
>gi|196016215|ref|XP_002117961.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
gi|190579434|gb|EDV19529.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
Length = 364
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 40 LVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVD 99
LV AG +IGKGG+ I F+ QS ARI +S +RI+ ++G ID + +A
Sbjct: 51 LVEQKEAGRIIGKGGAKIKSFREQSTARINISDGS-----LPERIVTVNGPIDAVCKAFK 105
Query: 100 LVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
L+ KL + + + K L++P C SIIGK G T+K + + A + I+
Sbjct: 106 LICQKLDEDFRIINNSSKSEPTIKFDLLIPVPHCRSIIGKGGGTVKEIRESTGAQVSIA- 164
Query: 160 LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA------GVFF 213
+ +DR++T+TG+ + ++ + LSE L VPY F
Sbjct: 165 -SNVLPNSSDRVMTITGSSSAISKCIQRLSQLLSELPLGQH---VPYQPKPPNVPPTAFQ 220
Query: 214 SG-FHGMPYGAVPPPVPAVPHNTAAHYGP 241
+G H + + AVP P P PH YGP
Sbjct: 221 NGQVHELTF-AVPGPFPIPPH-AQLPYGP 247
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 110 HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
HA D+ T + +V G IIGK GA IKSF + S A I IS D S L +
Sbjct: 34 HAFDRNSTGNTCFIDKGLVEQKEAGRIIGKGGAKIKSFREQSTARINIS--DGS---LPE 88
Query: 170 RLVTLTGTLDEQMRALELILLKLSED 195
R+VT+ G +D +A +LI KL ED
Sbjct: 89 RIVTVNGPIDAVCKAFKLICQKLDED 114
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+PT K L+ P ++IGKGG T+ + + +GA Q+S + P ++DR+
Sbjct: 121 SSKSEPTIK---FDLLIPVPHCRSIIGKGGGTVKEIRESTGA--QVSIASNVLPNSSDRV 175
Query: 85 IMISGTIDEILRAVDLVIDKLLTEL 109
+ I+G+ I + + + +LL+EL
Sbjct: 176 MTITGSSSAISKCIQR-LSQLLSEL 199
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
L G +IG+GG IN+ + SGA I+++ + TT R + ISGT E + A +I +
Sbjct: 292 LIGCIIGRGGVKINEIRQISGANIKIASPNG---DTTGRQVTISGT-PESISAAQYLISQ 347
Query: 105 LLTELH 110
LH
Sbjct: 348 SYKGLH 353
>gi|268562247|ref|XP_002638547.1| Hypothetical protein CBG05583 [Caenorhabditis briggsae]
Length = 399
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 97/174 (55%), Gaps = 14/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I+ L+ + GA+IGKGG + + ++ + R+Q+S++ E +PGT++RI ++ G ++ I+
Sbjct: 43 IKILIPSSAVGAIIGKGGEAMRNLKTDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMS 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK-----TKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
++ + DK+ + + +D K ++++++PN+S G +IGK+GA IK +
Sbjct: 103 VIESIQDKIREKCADQAGSDAFDHKNTSRGNEIKIVMPNTSAGMVIGKSGANIKDIREQF 162
Query: 152 QAVIKISRLDHSYYGLN--DRLVTL----TGTLDEQMRALELILLKLSEDTLYS 199
I++ S +R+VT+ +G L ++A +L K++ D +S
Sbjct: 163 GCQIQVYPKAGSVEAKTSLERVVTVAHDESGAL---LQAASRVLEKVASDPHHS 213
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 48/81 (59%)
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
Q ++ G +++++P+S+ G+IIGK G +++ D+ +++S+ +Y G ++R+
Sbjct: 33 QEEEGGDHLSIKILIPSSAVGAIIGKGGEAMRNLKTDNNCRVQMSKNSETYPGTSERICL 92
Query: 174 LTGTLDEQMRALELILLKLSE 194
+ G L+ M +E I K+ E
Sbjct: 93 VKGRLNNIMSVIESIQDKIRE 113
Score = 37.0 bits (84), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT--DRIIMIS 88
T + I+ ++ N AG VIGK G+ I D + Q G +IQ+ T +R++ ++
Sbjct: 129 TSRGNEIKIVMPNTSAGMVIGKSGANIKDIREQFGCQIQVYPKAGSVEAKTSLERVVTVA 188
Query: 89 GTIDE---ILRAVDLVIDKLLTELH--AEDQADDVG 119
DE +L+A V++K+ ++ H +E +D G
Sbjct: 189 --HDESGALLQAASRVLEKVASDPHHSSEINKEDFG 222
>gi|386771593|ref|NP_730700.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|442634089|ref|NP_001262197.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
gi|383292066|gb|AAN12194.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|440216174|gb|AGB94890.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
Length = 359
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 20/174 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K ++ +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKF-------EEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 133
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
I+++ +R VTL+G+ ++ + + I L + E + T+PY
Sbjct: 134 CSIQVA--SEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESP--PRGATIPY 183
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A
Sbjct: 267 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 326
Query: 99 DLV 101
L+
Sbjct: 327 YLI 329
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 267 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 326
Query: 186 ELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
LI +++S +T AG+ G+H
Sbjct: 327 YLINMRISMET------------AGLPIPGYH 346
>gi|17737727|ref|NP_524208.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
gi|1770212|emb|CAA67719.1| nucleic acid binding protein [Drosophila melanogaster]
gi|7296507|gb|AAF51792.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
Length = 386
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 16/174 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K Q +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
I+++ +R VTL+G+ ++ + + I L + E + T+PY
Sbjct: 138 CSIQVA--SEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESP--PRGATIPY 187
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A
Sbjct: 294 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 353
Query: 99 DLV 101
L+
Sbjct: 354 YLI 356
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 294 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 353
Query: 186 ELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
LI +++S +T AG+ G+H
Sbjct: 354 YLINMRISMET------------AGLPIPGYH 373
>gi|442634098|ref|NP_001262198.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
gi|440216175|gb|AGB94891.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
Length = 368
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG-TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L+ K + VG T+ +RLIVP S CGS+IGK+G+ IK + I
Sbjct: 81 AFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSI 140
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
+++ +R VTL+G+ ++ + + I L + E + T+PY
Sbjct: 141 QVA--SEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESP--PRGATIPY 187
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A
Sbjct: 276 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 335
Query: 99 DLV 101
L+
Sbjct: 336 YLI 338
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 276 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 335
Query: 186 ELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
LI +++S +T AG+ G+H
Sbjct: 336 YLINMRISMET------------AGLPIPGYH 355
>gi|328720738|ref|XP_001949210.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 79/145 (54%), Gaps = 14/145 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L G VIGKGG T+ + + QSGAR+ +S T +RI+ I+GT + I +
Sbjct: 23 IRILFHGREVGNVIGKGGETVKNIRDQSGARVLISDGS-----TPERIVTITGTTNAICK 77
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKL--RLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A +L+ K+ E D G K L +LIVP S CG IIGK G IK + S A
Sbjct: 78 ATELIGLKV-EEFFERQNGDWNGPKAPLTFKLIVPASQCGFIIGKGGCKIKEIRESSGAA 136
Query: 155 IKISR--LDHSYYGLNDRLVTLTGT 177
I+++ L +S +RLV++TGT
Sbjct: 137 IQVASDMLPNST----ERLVSITGT 157
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
+ P + +V G +IGKGG I + + SGA IQ+ + + P +T+R++ I+GT
Sbjct: 101 KAPLTFKLIVPASQCGFIIGKGGCKIKEIRESSGAAIQV--ASDMLPNSTERLVSITGTT 158
Query: 92 DEILRAVDLVIDKLL 106
I + V V + LL
Sbjct: 159 GTISQCVYQVCNVLL 173
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+R++ G++IGK G T+K+ D S A + IS D S +R+VT+TGT + +
Sbjct: 23 IRILFHGREVGNVIGKGGETVKNIRDQSGARVLIS--DGSTP---ERIVTITGTTNAICK 77
Query: 184 ALELILLKLSE 194
A ELI LK+ E
Sbjct: 78 ATELIGLKVEE 88
>gi|386771590|ref|NP_001246875.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
gi|383292065|gb|AFH04546.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
Length = 573
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 20/176 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K Q +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
I+++ L +S +R VTL+G+ ++ + + I L + E + T+PY
Sbjct: 138 CSIQVASEMLPNST----ERAVTLSGSAEQITQCIYQICLVMLESP--PRGATIPY 187
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A
Sbjct: 305 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 364
Query: 98 VDLV 101
L+
Sbjct: 365 QYLI 368
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 305 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 364
Query: 185 LELILL--KLSEDTLYSQTMT 203
LI + +L + L Q +
Sbjct: 365 QYLINMSVELQKANLLEQAQS 385
>gi|392922650|ref|NP_001256769.1| Protein Y59A8B.10, isoform a [Caenorhabditis elegans]
gi|11065662|emb|CAC14410.1| Protein Y59A8B.10, isoform a [Caenorhabditis elegans]
Length = 413
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 76/126 (60%), Gaps = 5/126 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I+ L+ + GA+IGKGG + + ++ + R+Q+S++ E +PGT++RI ++ G ++ I+
Sbjct: 44 IKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMA 103
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT-----KLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
++ + DK+ + + +D K ++++++PN+S G +IGK+GA IK +
Sbjct: 104 VIESIQDKIREKCADQGGSDAFDHKNTSRGAEIKIVMPNTSAGMVIGKSGANIKDIREQF 163
Query: 152 QAVIKI 157
I++
Sbjct: 164 GCQIQV 169
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 48/79 (60%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
++ G +++++P+++ G+IIGK G +++ +D+ +++S+ +Y G ++R+ +
Sbjct: 36 EEGGDHLSIKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVK 95
Query: 176 GTLDEQMRALELILLKLSE 194
G L+ M +E I K+ E
Sbjct: 96 GRLNNIMAVIESIQDKIRE 114
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT--DRIIMIS 88
T + I+ ++ N AG VIGK G+ I D + Q G +IQ+ T +R++ ++
Sbjct: 130 TSRGAEIKIVMPNTSAGMVIGKSGANIKDIREQFGCQIQVYPKAGSVEAKTSLERVVTVA 189
Query: 89 -GTIDEILRAVDLVIDKLLTELH--AEDQADDVG 119
+L+A V++K+ ++ H +E +D G
Sbjct: 190 HDEASALLQAASRVLEKVASDPHHASEINKEDFG 223
>gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus]
Length = 249
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
>gi|149036630|gb|EDL91248.1| similar to Pol(yrC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)
(predicted) [Rattus norvegicus]
Length = 337
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 93/167 (55%), Gaps = 16/167 (9%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK G ++ + +SGARI +S + +RII ++G + I +A ++IDKL
Sbjct: 7 GSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFKAFAMIIDKLE 61
Query: 107 TELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDH 162
++++ ++ LRL+VP + CGS+IGK G IK + + A ++++ L +
Sbjct: 62 EDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN 121
Query: 163 SYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 122 S----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 164
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 71 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 128
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 129 IAGVPQSVTECVKQICLVMLETLSQ 153
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 256 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 312
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 313 SAASISLAQYLINARLSSE 331
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 245 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 296
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 297 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 331
>gi|449546975|gb|EMD37943.1| hypothetical protein CERSUDRAFT_82176 [Ceriporiopsis subvermispora
B]
Length = 433
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 83/145 (57%), Gaps = 8/145 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+ A +IGKGGS +N+ + QSGAR+ +S E PG +RI+ +SG +D +
Sbjct: 113 HMRCLIVTQDASIIIGKGGSHVNEIREQSGARVVVS---ESIPGNPERILNVSGPLDAVS 169
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L++ ++ E D+ G++ ++ ++PNS GS+IGK G IK D S A
Sbjct: 170 KAFGLIVRRINDEPF--DKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGAR 227
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLD 179
+ S + G +R+++++G D
Sbjct: 228 LNAS--EGMLPGSTERVLSVSGVAD 250
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 9/79 (11%)
Query: 23 VKSLSSDPTEKPTY-------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
V+ ++ +P +KP+ I+F++ N G+VIGKGG+ I + Q SGAR L+ S
Sbjct: 176 VRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGAR--LNASEG 233
Query: 76 FFPGTTDRIIMISGTIDEI 94
PG+T+R++ +SG D I
Sbjct: 234 MLPGSTERVLSVSGVADAI 252
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 20/114 (17%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P ++ P ++ + + N L G +IGKGG+ IN+ + S ++I++ PG T
Sbjct: 322 PYQAPQGGPPQQLQTQQIFIPNDLVGCIIGKGGAKINEIRHMSASQIKI-----MEPGAT 376
Query: 82 ---------------DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
+R+++I+G I AV L+ +L E + +A G
Sbjct: 377 AVGMNGAPAPAGGEGERLVVITGQPANIQMAVQLLYHRLEQEKQKQLRAQQTGA 430
>gi|299753134|ref|XP_001833083.2| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
gi|298410159|gb|EAU88772.2| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
Length = 382
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 17/167 (10%)
Query: 19 STAPVKSLSSDPTEKP-TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
S P S S+ P ++R L+ A +IGKGG+ +N+ + +SGAR+ +S E
Sbjct: 67 SAEPTSSTSTAPPPSAHIHMRCLIVTQDASIIIGKGGAHVNEIREKSGARVMVS---ESI 123
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSS 132
PG +RI+ +SG +D + +A L++ ++ D+ DV G++ ++ ++PNS
Sbjct: 124 PGNPERILNVSGPLDAVSKAFGLIVRRI------NDEPFDVPSVPGSRAVTIKFMIPNSR 177
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
GS+IGKAG IK D S A + S + G +R++++ G D
Sbjct: 178 MGSVIGKAGCKIKEIQDASGARLNAS--EGMLPGSTERVLSVAGVAD 222
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 46/211 (21%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S P + I+F++ N G+VIGK G I + Q SGAR L+ S PG+T+R++ +
Sbjct: 160 SVPGSRAVTIKFMIPNSRMGSVIGKAGCKIKEIQDASGAR--LNASEGMLPGSTERVLSV 217
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKL----------------------- 124
+G D I A I +L E + + + + +
Sbjct: 218 AGVADAIHIAT-YYIGNILIEANERLPSSNGSSYRPMAGSSASSSRRHHYTGSSYVPGPY 276
Query: 125 ----------------RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL- 167
+ +PN G IIG+ G+ I S + IKI G
Sbjct: 277 PGYPPPHNPPQQLQTQEIFIPNGLVGCIIGRGGSKINEIRHMSASQIKIMEPGAGSGGRP 336
Query: 168 ---NDRLVTLTGTLDEQMRALELILLKLSED 195
+RLV +TG A++L+ +L ++
Sbjct: 337 APEGERLVVITGNPPNVQMAIQLLYTRLEQE 367
>gi|341893250|gb|EGT49185.1| hypothetical protein CAEBREN_32371 [Caenorhabditis brenneri]
Length = 430
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 77/128 (60%), Gaps = 9/128 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I+ L+ + GA+IGKGG + + ++ + R+Q+S++ E +PGT++RI ++ G ++ I+
Sbjct: 45 IKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMA 104
Query: 97 AVDLVIDKLLTELHAEDQA-------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
++ + DK+ + DQA + +++++++PN+S G +IGK+GA IK +
Sbjct: 105 VIESIQDKIREKC--ADQAGNDAFDHKNTSRGSEIKIVMPNTSAGMVIGKSGANIKDIRE 162
Query: 150 DSQAVIKI 157
I++
Sbjct: 163 HFSCQIQV 170
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 49/81 (60%)
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
Q ++ G +++++P+++ G+IIGK G +++ +D+ +++S+ +Y G ++R+
Sbjct: 35 QEEEGGDHLSIKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICL 94
Query: 174 LTGTLDEQMRALELILLKLSE 194
+ G L+ M +E I K+ E
Sbjct: 95 VKGRLNNIMAVIESIQDKIRE 115
>gi|386771588|ref|NP_001246874.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
gi|383292064|gb|AFH04545.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
Length = 539
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 24/176 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K ++ +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKF-------EEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 133
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
I+++ L +S +R VTL+G+ ++ + + I L + E + T+PY
Sbjct: 134 CSIQVASEMLPNST----ERAVTLSGSAEQITQCIYQICLVMLESP--PRGATIPY 183
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A
Sbjct: 272 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 331
Query: 99 DLV 101
L+
Sbjct: 332 YLI 334
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 272 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 331
Query: 186 ELILLKL 192
LI + +
Sbjct: 332 YLINMSV 338
>gi|308486259|ref|XP_003105327.1| hypothetical protein CRE_21277 [Caenorhabditis remanei]
gi|308256835|gb|EFP00788.1| hypothetical protein CRE_21277 [Caenorhabditis remanei]
Length = 441
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 76/128 (59%), Gaps = 9/128 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I+ L+ + GA+IGKGG + + ++ + R+Q+S++ E +PGT++RI ++ G ++ I+
Sbjct: 45 IKILIPSSAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMA 104
Query: 97 AVDLVIDKLLTELHAEDQA-------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
++ + DK+ + DQA + ++++++PN+S G +IGK+GA IK +
Sbjct: 105 VIESIQDKIREKC--ADQAGNDAFDHKNTSRGNEIKIVMPNTSAGMVIGKSGANIKDIRE 162
Query: 150 DSQAVIKI 157
I++
Sbjct: 163 QFGCQIQV 170
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 49/81 (60%)
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
Q ++ G +++++P+S+ G+IIGK G +++ +D+ +++S+ +Y G ++R+
Sbjct: 35 QEEEGGDHLSIKILIPSSAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICL 94
Query: 174 LTGTLDEQMRALELILLKLSE 194
+ G L+ M +E I K+ E
Sbjct: 95 VKGRLNNIMAVIESIQDKIRE 115
>gi|281366597|ref|NP_001163493.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|386771584|ref|NP_001246873.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
gi|134085557|gb|ABO52837.1| IP17311p [Drosophila melanogaster]
gi|272455272|gb|ACZ94764.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|383292063|gb|AFH04544.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
Length = 557
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 24/176 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K ++ +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKF-------EEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 133
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
I+++ L +S +R VTL+G+ ++ + + I L + E + T+PY
Sbjct: 134 CSIQVASEMLPNST----ERAVTLSGSAEQITQCIYQICLVMLESP--PRGATIPY 183
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A
Sbjct: 290 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 349
Query: 99 DLV 101
L+
Sbjct: 350 YLI 352
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 290 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 349
Query: 186 ELILLKL 192
LI + +
Sbjct: 350 YLINMSV 356
>gi|363746094|ref|XP_003643523.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Gallus gallus]
Length = 239
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ D + R
Sbjct: 21 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTDAVFR 75
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
AV ++ KL +L A T LRL++P S CGS+IGKAG I+ + S A ++
Sbjct: 76 AVSMIAFKLEEDLGDGTAAGR--TPVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQ 133
Query: 157 ISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAG 210
++ L +S +R VT++G D ++ + I + E + T+PY +
Sbjct: 134 VAGDLLPNS----TERAVTVSGVPDTIIQCVRQICAVILESP--PKGATIPYHPGLSLGT 187
Query: 211 VFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGG 245
+ S G Y VPP ++ + +G + GG
Sbjct: 188 ILLSANQGFSMQGQYSGVPPAEVSLSQLCSLVHGASPGG 226
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + SGA++Q+ + + P +T+R + +SG D
Sbjct: 98 PVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQV--AGDLLPNSTERAVTVSGVPDT 155
Query: 94 ILRAVDLVIDKLL 106
I++ V + +L
Sbjct: 156 IIQCVRQICAVIL 168
>gi|291414465|ref|XP_002723480.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 319
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 92/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ + +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIISSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 ISSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 245 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 301
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 302 QYLINARLTSEV 313
>gi|321475563|gb|EFX86525.1| hypothetical protein DAPPUDRAFT_307836 [Daphnia pulex]
Length = 364
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 14/191 (7%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+T K L D IR L++ G++IGK G + F+ +SGARI +S
Sbjct: 2 ATVDSKGLPHDAPSVTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISDGS---- 57
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-KTKLRLIVPNSSCGSII 137
+RI+ I+GT D I +A +L+ KL E+ + LRLI+P S CGS+I
Sbjct: 58 -CPERIVTITGTTDAIFKAFNLICKKLEEEVGGPLAGTAIPRPPITLRLIMPASQCGSLI 116
Query: 138 GKAGATIKSFMDDSQA--VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
GK G+ IK + + A V+ L +S +R VT++GT D + + I + E
Sbjct: 117 GKGGSKIKEIREITGASVVVASEMLPNS----TERAVTVSGTSDAITQCIYHICCVMLES 172
Query: 196 TLYSQTMTVPY 206
+ T+PY
Sbjct: 173 P--PKGATIPY 181
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
V N L G +IGKGG+ I + + SGA I++S E +++R I I+GT + + A
Sbjct: 273 MAVPNELIGCIIGKGGTKIAEIRQISGAMIRISNC-EDRESSSERTITITGTAESVALAQ 331
Query: 99 DLVIDKLLTELHA 111
L+ +L E A
Sbjct: 332 YLINTRLAMETAA 344
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ VPN G IIGK G I S A+I+IS + ++R +T+TGT + A
Sbjct: 273 MAVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEDRESS-SERTITITGTAESVALAQ 331
Query: 186 ELILLKLSEDTLYSQTMTVPY 206
LI +L+ +T M P+
Sbjct: 332 YLINTRLAMETAAMGMMGYPF 352
>gi|116007842|ref|NP_001036619.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
gi|113194920|gb|ABI31266.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
Length = 539
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 20/176 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +SGT + I
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVSGTTNAIFS 80
Query: 97 AVDLVIDKLLTELHAEDQADDVG----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A L+ K Q +DVG T+ +RLIVP S CGS+IGK+G+ IK +
Sbjct: 81 AFTLITKKFEEWC---SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
I+++ L +S +R VTL+G+ ++ + + I L + E + T+PY
Sbjct: 138 CSIQVASEMLPNST----ERAVTLSGSAEQITQCIYQICLVMLESP--PRGATIPY 187
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
VSN L G +IGKGG+ I + + SGA I++S E G TDR I ISG D + A
Sbjct: 271 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 330
Query: 98 VDLV 101
L+
Sbjct: 331 QYLI 334
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ V N G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 271 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 330
Query: 185 LELILLKL 192
LI + +
Sbjct: 331 QYLINMSV 338
>gi|397521979|ref|XP_003846057.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 2 [Pan
paniscus]
Length = 465
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 20/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLES---PKGVTIPYRPKPSS 183
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 184 SPVIFAG 190
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 278 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 334
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDV 118
G+ I A +I+ L QA V
Sbjct: 335 GSAASISLA-QYLINVSLENAKPSSQAASV 363
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 278 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 334
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTV 204
G+ A LI + L SQ +V
Sbjct: 335 GSAASISLAQYLINVSLENAKPSSQAASV 363
>gi|198465289|ref|XP_001353580.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
gi|198150092|gb|EAL31093.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
Length = 330
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 9/168 (5%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ T IR ++ G++IGK G +N F+ +SGA+I +S +RI+ +S
Sbjct: 19 DPSVTLT-IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS-----CPERIVTVS 72
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVG-TKTKLRLIVPNSSCGSIIGKAGATIKSF 147
GT + I A L+ K + A +G T+ +RLIVP S CGS+IGK+G+ IK
Sbjct: 73 GTTNAIFSAFTLITKKFEEWCSQFNDAGKIGKTQIPIRLIVPASQCGSLIGKSGSKIKEI 132
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ I+++ +R VTL+G+ ++ + + I L + E
Sbjct: 133 RQTTGCSIQVA--SEMLPNSTERAVTLSGSAEQITQCIYQICLVMLES 178
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 59/236 (25%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR +V G++IGK GS I + + +G IQ++ E P +T+R + +SG+ ++I +
Sbjct: 109 IRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVA--SEMLPNSTERAVTLSGSAEQITQ 166
Query: 97 AVDLVIDKLL-------------------------------------------TELHAED 113
+ + +L ++L +
Sbjct: 167 CIYQICLVMLESCPRSTVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRTAN 226
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
A+ + + + V N G IIGK G I S A+I+IS + G DR +T
Sbjct: 227 AANRA-QQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTIT 285
Query: 174 LTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGM-PYGAVPPPV 228
++G D A LI +++S +T AG+ G+H + P V P+
Sbjct: 286 ISGNPDSVALAQYLINMRISMET------------AGLPIPGYHYIAPSAIVKTPI 329
>gi|218190341|gb|EEC72768.1| hypothetical protein OsI_06421 [Oryza sativa Indica Group]
Length = 658
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 12/165 (7%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N G +IGK G TI + Q QSGA+IQ++R + PG+ R + +SGT D+I RA L
Sbjct: 108 IPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQISRAEQL 167
Query: 101 VIDKLLTELHAEDQADDVGTK--------TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
I+++L E A + K + ++ + N+ G +IGK G TIKS S
Sbjct: 168 -INEVLAEADAASSGNLSSRKYNAPQPGADQFQMKIANNKVGLVIGKGGETIKSMQAKSG 226
Query: 153 AVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELILLKLSED 195
A I++ L H G +R V + GT ++ A +L++ SE+
Sbjct: 227 ARIQVVPL-HLPPGDPATERTVYIDGTQEQIETAKQLVIEVTSEN 270
>gi|345320820|ref|XP_001521752.2| PREDICTED: poly(rC)-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 261
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
>gi|328851244|gb|EGG00400.1| hypothetical protein MELLADRAFT_39696 [Melampsora larici-populina
98AG31]
Length = 420
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ A +IGKGG IN+ + +SGAR +S E PG +RI+ + G +D + +
Sbjct: 92 MRALIVTQDASIIIGKGGRHINEIREKSGARATIS---EAVPGNAERILSVGGPLDAVSK 148
Query: 97 AVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
A L++ ++ D+ DV G++ +R +VPNS GS+IGKAG+ IK D S
Sbjct: 149 AFGLIVRRI------NDEPFDVPSVPGSRAVTIRFVVPNSRMGSVIGKAGSKIKEIQDMS 202
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLD 179
A ++ S + G +R+++++G D
Sbjct: 203 GARVQAS--EAMLPGSTERVLSVSGVAD 228
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S P + IRF+V N G+VIGK GS I + Q SGAR+Q S + PG+T+R++ +
Sbjct: 166 SVPGSRAVTIRFVVPNSRMGSVIGKAGSKIKEIQDMSGARVQASEA--MLPGSTERVLSV 223
Query: 88 SGTIDEILRAV 98
SG D + AV
Sbjct: 224 SGVADAVHIAV 234
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF--FPGTTDRIIMISGTIDEIL 95
+ + N L GAVIGKGG IN+ + S I++ E T +R++ I+G +I
Sbjct: 344 QIYIPNELVGAVIGKGGQKINEIRQASATHIKIMEPGEGGQAASTNERLVTITGQPLQIQ 403
Query: 96 RAVDLVIDKLLTE 108
AV L+ +L E
Sbjct: 404 MAVQLLYQRLEAE 416
>gi|74141926|dbj|BAE41029.1| unnamed protein product [Mus musculus]
Length = 278
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
>gi|432112571|gb|ELK35287.1| Poly(rC)-binding protein 2 [Myotis davidii]
Length = 453
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ SGA+I+++ E G+TDR + I+
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIHQMSGAQIKIANPVE---GSTDRQVTIT 322
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 323 GSAASISLAQYLI 335
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIHQMSGAQIKIA---NPVEGSTDRQVTIT 322
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTV 204
G+ A LI + L SQ +V
Sbjct: 323 GSAASISLAQYLINVSLENAKPSSQAASV 351
>gi|410920039|ref|XP_003973491.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 327
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 26/204 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTAHSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPP 227
+ V F+G G Y A+P P
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQP 206
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+GT I+ V + +L
Sbjct: 148 IAGTAHSIIECVKQICVVML 167
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + + N L G +IG+ G+ I++ + SGA+I+++ + G+TDR + I+
Sbjct: 243 DASAQACSHEMTIPNDLIGCIIGRQGAKISEIRQMSGAQIKIANPVD---GSTDRQVTIT 299
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 300 GSPASIGLAEYLIKARLSSE 319
>gi|169844143|ref|XP_001828793.1| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
gi|116510164|gb|EAU93059.1| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
Length = 343
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 99/181 (54%), Gaps = 10/181 (5%)
Query: 18 RSTAPVKSLSSDPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
++T+P +S S P T +R LVS AG +IGK G + D + Q+G + +S+
Sbjct: 10 QTTSPPRSRSPTPAPNETLTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSK---V 66
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSI 136
G +R++ ++G+++ + +A +L+I +L++ A A T +RL++ ++ G+I
Sbjct: 67 IAGVHERVLTVTGSVEAVAKAYNLIISQLVSSNPAAPPASSSNVHTSIRLLISHNLMGTI 126
Query: 137 IGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IG+ G IK+ D+S A + S+ L S +R+V + G+ + RA+E I L E
Sbjct: 127 IGRNGLKIKAIQDNSGARMVASKEMLPQS----TERVVEVQGSPEAIGRAVEEIGKCLLE 182
Query: 195 D 195
D
Sbjct: 183 D 183
>gi|301604860|ref|XP_002932078.1| PREDICTED: poly(rC)-binding protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 339
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG 215
A V F+G
Sbjct: 185 APVIFAG 191
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 24 KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
+S D + + + + N L G +IG+ G+ IN+ + SGA+I+++ + E G+ +R
Sbjct: 251 QSAGMDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIASAME---GSAER 307
Query: 84 IIMISGTIDEILRAVDLVIDKLLTEL 109
I I+G+ I A L+ +L +E+
Sbjct: 308 QITITGSPANISLAQYLINARLTSEV 333
>gi|147903491|ref|NP_001091320.1| poly(rC) binding protein 1 [Xenopus laevis]
gi|124481736|gb|AAI33216.1| LOC100037147 protein [Xenopus laevis]
Length = 221
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + +
Sbjct: 71 AFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG 215
A V F+G
Sbjct: 185 APVIFAG 191
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +G+++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
>gi|321455006|gb|EFX66153.1| hypothetical protein DAPPUDRAFT_2216 [Daphnia pulex]
Length = 388
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 26/229 (11%)
Query: 30 PTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
P +P + +R LV++ + GA+IG+ G TI Q+ AR+ + R G+ ++ I I
Sbjct: 5 PQRQPDFPLRVLVASEMVGAIIGRQGGTIRQITQQTRARVDVHRKENV--GSLEKAITIY 62
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G + A V++ + E ++ + L+++ N+ G IIGK G+TIK M
Sbjct: 63 GNPENCTNACRRVLEVMQQEADNTNKGE-----ISLKILAHNNLIGRIIGKGGSTIKRVM 117
Query: 149 DDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQT 201
+++ I +S L D S + + +R++T+ GT+D RA +I KL + + Q+
Sbjct: 118 LETETKITVSSLNDVSSFNM-ERVITIKGTIDNMSRAEGMISAKLRQSYESDLQAMAPQS 176
Query: 202 MTVP-------YTYAGVFFS-GFHGMPYGAVPPPVP--AVPHNTAAHYG 240
M P + G+ FS G P A P P A P+ A G
Sbjct: 177 MMFPGLHPMAMMSTVGMGFSPSVRGTPPAAAPGMYPPGAAPYAQAGPAG 225
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 53/231 (22%)
Query: 18 RSTAPVKSLSSDPTEK-PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
R V +D T K ++ L N L G +IGKGGSTI ++ +I +S ++
Sbjct: 73 RRVLEVMQQEADNTNKGEISLKILAHNNLIGRIIGKGGSTIKRVMLETETKITVSSLNDV 132
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD-------------------D 117
+R+I I GTID + RA ++ KL ++ QA
Sbjct: 133 SSFNMERVITIKGTIDNMSRAEGMISAKLRQSYESDLQAMAPQSMMFPGLHPMAMMSTVG 192
Query: 118 VGTKTKLRLIVPNSSCG-------------------------------SIIGKAGATIKS 146
+G +R P ++ G +IIG G+ I++
Sbjct: 193 MGFSPSVRGTPPAAAPGMYPPGAAPYAQAGPAGVGETSFLYIPNSAVGAIIGTRGSHIRN 252
Query: 147 FMDDSQAVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELILLKLSED 195
+ S A +KI+ L +R VT+ GT + Q +A LI K+ E+
Sbjct: 253 IIRFSGASVKITSLPEGTTAEPQAERKVTIVGTPEAQWKAQYLIFEKMREE 303
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT-----DRIIMISGTIDE 93
+ N GA+IG GS I + SGA ++++ E GTT +R + I GT +
Sbjct: 232 LYIPNSAVGAIIGTRGSHIRNIIRFSGASVKITSLPE---GTTAEPQAERKVTIVGTPEA 288
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A L+ +K+ E D + + L+V +S G IIGK G ++ + +
Sbjct: 289 QWKAQYLIFEKMREEGFMPAGED---VRLTVELLVASSQVGRIIGKGGQNVREMQRTTSS 345
Query: 154 VIKI 157
VIK+
Sbjct: 346 VIKL 349
>gi|380792097|gb|AFE67924.1| poly(rC)-binding protein 2 isoform f, partial [Macaca mulatta]
Length = 197
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSG 215
+ + V F+G
Sbjct: 187 SSSPVIFAG 195
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 148 IAGIPQSIIECVKQICVVMLETL 170
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D + +RL++ GSIIGK G ++K ++S A R++ S +R++TL
Sbjct: 8 DGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGA-----RINISEGNCPERIITLA 62
Query: 176 GTLDEQMRALELILLKLSEDTLYSQT 201
G + +A +I+ KL ED S T
Sbjct: 63 GPTNAIFKAFAMIIDKLEEDISSSMT 88
>gi|391338059|ref|XP_003743379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Metaseiulus occidentalis]
Length = 707
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 24/210 (11%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE---FFPGTTDRIIM 86
P E P +R LV + + GA+IGK G+TI QS A++++++ + F G D++I
Sbjct: 192 PKELP--VRMLVPSEMVGAIIGKSGATITSITQQSQAKVEVNKKNAGGIFADGQVDKVIN 249
Query: 87 ISGTIDEILRAVDLVIDKLLTELHA-EDQADDVGTKTK------LRLIVPNSSCGSIIGK 139
I GT + +A +++ +L E + GT + LRL+ N+ G +IG+
Sbjct: 250 IHGTNEACSQACKRILEVMLQESQQPATNTMNGGTSRRRDEPITLRLLAHNNLVGRVIGR 309
Query: 140 AGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+G IK M+++ A I +S++ +R++ + G L+E +A + I K+ + Y
Sbjct: 310 SGIVIKKIMEETNAKINVSQMTDP----RERVIVIRGNLEEMSKAQQQITSKMRQ--CYE 363
Query: 200 QTMTVPYTYAGVFFSGFHGMPYGAVPPPVP 229
Q + G+ G G P +P
Sbjct: 364 QDLQQ------AMMGGYGGPDLGPPPQQIP 387
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 26 LSSDPTEKPTYIRFLVSNP--LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
+S+DP + ++R ++ P G +IG+GGST+ D Q QSGA I+L G+ D
Sbjct: 584 VSNDPQIQQGHLRIEINVPSNQVGRIIGRGGSTVKDMQRQSGAIIKLPEETSRRAGSPDE 643
Query: 84 II 85
+
Sbjct: 644 AV 645
>gi|417410186|gb|JAA51570.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 376
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 82
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 83 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 142
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 143 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 198
Query: 207 TYAGVFFSG 215
+ + V F+G
Sbjct: 199 SSSPVIFAG 207
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 102 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 159
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 160 IAGIPQSIIECVKQICVVMLETL 182
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 295 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 351
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 352 SAASISLAQYLINARLSSE 370
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 284 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 335
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 336 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 370
>gi|384947752|gb|AFI37481.1| poly(rC)-binding protein 3 isoform 1 [Macaca mulatta]
Length = 370
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 296 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 352
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 353 QYLINARLTSEV 364
>gi|390478281|ref|XP_002761548.2| PREDICTED: poly(rC)-binding protein 3 [Callithrix jacchus]
Length = 393
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 319 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 375
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 376 QYLINARLTSEV 387
>gi|148699887|gb|EDL31834.1| poly(rC) binding protein 3, isoform CRA_c [Mus musculus]
Length = 373
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 51 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 105
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 106 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 165
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 166 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 213
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 119 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 176
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 177 TERAVTISGTPDAIIQCVKQICVVML 202
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 299 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 355
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 356 QYLINARLTSEV 367
>gi|114684793|ref|XP_001157578.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan troglodytes]
gi|397506694|ref|XP_003823856.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan paniscus]
gi|426393343|ref|XP_004062984.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 351
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 277 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 333
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 334 QYLINARLTSEV 345
>gi|119629731|gb|EAX09326.1| poly(rC) binding protein 3, isoform CRA_d [Homo sapiens]
Length = 393
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 319 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 375
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 376 QYLINARLTSEV 387
>gi|327265639|ref|XP_003217615.1| PREDICTED: poly(rC)-binding protein 4-like [Anolis carolinensis]
Length = 422
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 19/176 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ D + R
Sbjct: 30 LRMLMHGKEVGSIIGKKGETVKRIREQSTARITISEGS-----CPERITTITGSTDAVFR 84
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK----LRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
AV ++ KL +L A + GT +K LRL++P S CGS+IGKAGA IK + +
Sbjct: 85 AVSMIAFKLEEDLGT--GAINGGTVSKPPVTLRLVIPASQCGSLIGKAGAKIKEIRETTG 142
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
A ++++ L +S +R VT++G D ++ + I + E + T+PY
Sbjct: 143 AQVQVAGDLLPNS----TERAVTVSGVPDAIIQCVRQICAVILESP--PKGATIPY 192
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG
Sbjct: 108 SKPPVTLRLVIPASQCGSLIGKAGAKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGV 165
Query: 91 IDEILRAVDLVIDKLL 106
D I++ V + +L
Sbjct: 166 PDAIIQCVRQICAVIL 181
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
FLV N L G +IG+ GS I++ + SGA I++ E G+ +R + I+GT I A
Sbjct: 259 EFLVPNDLIGCIIGRQGSKISEIRQMSGAHIKIGNQTE---GSAERHVTITGTPVSITLA 315
Query: 98 VDLV 101
L+
Sbjct: 316 QYLI 319
>gi|403297205|ref|XP_003939469.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 277 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 333
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 334 QYLINARLTSEV 345
>gi|402862114|ref|XP_003895414.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Papio anubis]
Length = 327
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
>gi|348511523|ref|XP_003443293.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 321
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDTIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT + ++ + I + + E + T+PY T
Sbjct: 133 VQVAGDMLPNS----TERAVTISGTPEAIIQCVRQICVVMLESP--PKGATIPYRPKPTS 186
Query: 209 AGVFFSG 215
V FSG
Sbjct: 187 TPVIFSG 193
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 247 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME---GSSERQITITGTPANISLA 303
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 304 QYLINARLTSEV 315
>gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]
Length = 370
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 296 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 352
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 353 QYLINARLTSEV 364
>gi|109065035|ref|XP_001099540.1| PREDICTED: poly(rC)-binding protein 3-like isoform 4 [Macaca
mulatta]
Length = 370
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 296 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 352
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 353 QYLINARLTSEV 364
>gi|332256670|ref|XP_003277439.1| PREDICTED: poly(rC)-binding protein 3 [Nomascus leucogenys]
Length = 393
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 319 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 375
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 376 QYLINARLTSEV 387
>gi|170087462|ref|XP_001874954.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650154|gb|EDR14395.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 339
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 16/166 (9%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S P S ++ P ++R L+ A +IGKGGS +N+ + +SGAR+ +S E P
Sbjct: 41 SGEPSTSSTAAPPSANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVS---ESIP 97
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSC 133
G +RI+ +SG +D + +A L++ ++ D+ DV G++ ++ ++PNS
Sbjct: 98 GNPERILNVSGPLDAVSKAFGLIVRRI------NDEPFDVPSVPGSRAVTIKFMIPNSRM 151
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
GS+IGK G+ IK D S A + S + G +R++++ G D
Sbjct: 152 GSVIGKQGSKIKEIQDASGARLNAS--EGMLPGSTERVLSVAGVAD 195
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 34/197 (17%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + I+F++ N G+VIGK GS I + Q SGAR L+ S PG+T+R++ ++G
Sbjct: 135 PGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGAR--LNASEGMLPGSTERVLSVAG 192
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLR---------------------LIV 128
D I A I +L E + T R + +
Sbjct: 193 VADAIHIAT-YYIGNILIEAQERMPSSANSTYRPSRYASNPYPPPHNPPPQQLQTQQIYI 251
Query: 129 PNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN----------DRLVTLTGTL 178
PN G IIGK G+ I S + IKI G+N +RLV +TG
Sbjct: 252 PNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVGVGMNGAPAPAGGEGERLVVITGQP 311
Query: 179 DEQMRALELILLKLSED 195
A++L+ +L ++
Sbjct: 312 ANIQMAVQLLYHRLEQE 328
>gi|403297203|ref|XP_003939468.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 297 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 353
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 354 QYLINARLTSEV 365
>gi|225707620|gb|ACO09656.1| PolyrC-binding protein 2 [Osmerus mordax]
Length = 318
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 25/218 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPQSIIECVKQICVVMLEQS-PPKGVTIPYRPKPSG 185
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP 241
+ V F+G G Y A+P P H A P
Sbjct: 186 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSP 221
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLLTE 108
I+GT I+ V + +L +
Sbjct: 148 IAGTPQSIIECVKQICVVMLEQ 169
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + + + N L G +IG+ GS IN+ + SGA+I+++ + G+ DR + I+
Sbjct: 235 DASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANPVD---GSADRQVTIT 291
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 292 GSPASISLAEYLINARLSSE 311
>gi|171906586|ref|NP_067543.2| poly(rC)-binding protein 3 [Mus musculus]
gi|296439279|sp|P57722.3|PCBP3_MOUSE RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]
gi|148699881|gb|EDL31828.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699882|gb|EDL31829.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699883|gb|EDL31830.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699888|gb|EDL31835.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
Length = 371
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 297 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 353
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 354 QYLINARLTSEV 365
>gi|332872312|ref|XP_001157899.2| PREDICTED: poly(rC)-binding protein 3 isoform 8 [Pan troglodytes]
gi|397506692|ref|XP_003823855.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Pan paniscus]
gi|426393341|ref|XP_004062983.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 371
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 297 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 353
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 354 QYLINARLTSEV 365
>gi|403417714|emb|CCM04414.1| predicted protein [Fibroporia radiculosa]
Length = 420
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 11/168 (6%)
Query: 16 GKRSTAPVKSLSSDPTEKPT---YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
G +T+ S SS P ++R L+ A +IGKGGS +N+ + +S AR+ +S
Sbjct: 98 GSATTSAAPSTSSATGAAPAANIHMRCLIVTQDASIIIGKGGSHVNEIREKSSARVMVS- 156
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNS 131
E PG +RI+ +SG +D + +A L++ ++ E D+ G++ ++ ++PNS
Sbjct: 157 --ESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPF--DKPSVPGSRAVTIKFMIPNS 212
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
GS+IGK GA IK D S A + S + G +R+++++G D
Sbjct: 213 RMGSVIGKGGAKIKEIQDASGARLNAS--EGMLPGSTERVLSVSGVAD 258
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 94/228 (41%), Gaps = 60/228 (26%)
Query: 23 VKSLSSDPTEKPTY-------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
V+ ++ +P +KP+ I+F++ N G+VIGKGG+ I + Q SGAR L+ S
Sbjct: 184 VRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGAR--LNASEG 241
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLR---------- 125
PG+T+R++ +SG D I A I +L E A ++ + R
Sbjct: 242 MLPGSTERVLSVSGVADAIHIAT-YYIGNILIE--ANERLPSYNNSSYYRPSSNSRRPPP 298
Query: 126 ----------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
+ +PN G IIGK G+ I S + IKI
Sbjct: 299 NGSSYVPGYSNTYPGSSHGPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASNIKI 358
Query: 158 SRLDHSYYGLN----------DRLVTLTGTLDEQMRALELILLKLSED 195
G+N +RLV +TG A++L+ +L ++
Sbjct: 359 MEPGAVGVGMNGAPAPAGGEGERLVVITGQPANIQMAVQLLYHRLEQE 406
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 21/125 (16%)
Query: 4 NESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQ 63
N SSYVP G +T P S P ++ + + N L G +IGKGGS IN+ +
Sbjct: 299 NGSSYVP-----GYSNTYP--GSSHGPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHM 351
Query: 64 SGARIQ----------LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE----L 109
S + I+ ++ + G +R+++I+G I AV L+ +L E L
Sbjct: 352 SASNIKIMEPGAVGVGMNGAPAPAGGEGERLVVITGQPANIQMAVQLLYHRLEQEKQKQL 411
Query: 110 HAEDQ 114
A+ Q
Sbjct: 412 RAQQQ 416
>gi|380798665|gb|AFE71208.1| poly(rC)-binding protein 3 isoform 1, partial [Macaca mulatta]
Length = 370
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 47 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 101
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 102 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 161
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 162 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 209
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 115 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 172
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 173 TERAVTISGTPDAIIQCVKQICVVML 198
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 296 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 352
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 353 QYLINARLTSEV 364
>gi|417399455|gb|JAA46731.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 351
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSG 215
+ + V F+G
Sbjct: 187 SSSPVIFAG 195
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 148 IAGIPQSIIECVKQICVVMLETL 170
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 270 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 326
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 327 SAASISLAQYLINARLSSE 345
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S D + + T+ + N L G +IG+ G+ IN+ + SGA+I+++ E G++ R
Sbjct: 266 SASLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE---GSSGRQ 321
Query: 85 IMISGTIDEILRAVDLVIDKLLTE 108
+ I+G+ I A L+ +L +E
Sbjct: 322 VTITGSAASISLAQYLINARLSSE 345
>gi|119629730|gb|EAX09325.1| poly(rC) binding protein 3, isoform CRA_c [Homo sapiens]
Length = 370
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 296 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 352
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 353 QYLINARLTSEV 364
>gi|432110248|gb|ELK34019.1| Poly(rC)-binding protein 3 [Myotis davidii]
Length = 347
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 58 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 112
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 113 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 172
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 173 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 220
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 52/220 (23%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 126 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 183
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTE------------------LHAEDQADDVGTKT 122
T+R + ISGT D I++ V + +L + A QA + +
Sbjct: 184 TERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQY 243
Query: 123 KL---------------------------RLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+ L +PN G IIG+ G I S A I
Sbjct: 244 AIPHPDVSFHFVCLPFSSCLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQI 303
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
KI+ ++ G ++R +T+TGT A LI +L+ +
Sbjct: 304 KIA---NATEGSSERQITITGTPANISLAQYLINARLTSE 340
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 9 VPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARI 68
+P PDV P S D + + + N L G +IG+ G+ IN+ + SGA+I
Sbjct: 245 IPHPDVSFHFVCLPFSSCL-DASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQI 303
Query: 69 QLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
+++ + E G+++R I I+GT I A L+ +L +E+
Sbjct: 304 KIANATE---GSSERQITITGTPANISLAQYLINARLTSEV 341
>gi|348537598|ref|XP_003456280.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 593
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 22/200 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +S ARI +S +RII I+G D + R
Sbjct: 130 LRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGS-----CPERIITITGPTDCVFR 184
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ KL +L A V +K LRL++P S CGS+IGK G+ IK + + A
Sbjct: 185 AFTMITFKLEEDLMALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQ 244
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G+ D ++ ++LI + E + T+PY T
Sbjct: 245 VQVAGDLLPNS----TEREVTISGSQDAIIQCVKLICTVILESP--PKGATIPYRPSPTP 298
Query: 209 AGVFFSG---FHGMPYGAVP 225
V +G F +G+ P
Sbjct: 299 GTVLLAGNQVFEASDFGSHP 318
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R ++ G++IGKGGS I + + +GA++Q+ + + P +T+R + ISG+
Sbjct: 208 SKPPVTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQV--AGDLLPNSTEREVTISGS 265
Query: 91 IDEILRAVDLVIDKLL 106
D I++ V L+ +L
Sbjct: 266 QDAIIQCVKLICTVIL 281
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+G LRL++ GSIIGK G T+K ++S A I IS +R++T+TG
Sbjct: 124 MGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISE-----GSCPERIITITGP 178
Query: 178 LDEQMRALELILLKLSEDTL 197
D RA +I KL ED +
Sbjct: 179 TDCVFRAFTMITFKLEEDLM 198
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T L+ N L G++IG+ G+ IN+ + SGA+I++ + T+DR + ISGT
Sbjct: 381 TSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQID---STSDRHVTISGT 433
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI-SRLDHSYYGLNDRLVTLTGTLDE 180
T L++PN GSIIG+ G I S A IKI S++D + +DR VT++GT
Sbjct: 381 TSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQIDST----SDRHVTISGTPIA 436
Query: 181 QMRALELI--LLKLSEDTLYSQTMTVP 205
A LI L+ ++ T S +M P
Sbjct: 437 INLAQYLITSCLETAKSTAQSSSMPSP 463
>gi|194306631|ref|NP_065389.2| poly(rC)-binding protein 3 isoform 1 [Homo sapiens]
gi|296439262|sp|P57721.2|PCBP3_HUMAN RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|119629729|gb|EAX09324.1| poly(rC) binding protein 3, isoform CRA_b [Homo sapiens]
Length = 371
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 297 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 353
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 354 QYLINARLTSEV 365
>gi|348554794|ref|XP_003463210.1| PREDICTED: poly(rC)-binding protein 3-like [Cavia porcellus]
Length = 384
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 61 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 115
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 116 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 175
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 176 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 223
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 129 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 186
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 187 TERAVTISGTPDAIIQCVKQICVVML 212
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 310 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 366
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 367 QYLINARLTSEV 378
>gi|363735768|ref|XP_003641607.1| PREDICTED: poly(rC)-binding protein 3-like [Gallus gallus]
gi|449506326|ref|XP_002191682.2| PREDICTED: poly(rC)-binding protein 3 [Taeniopygia guttata]
Length = 339
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 265 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 321
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 322 QYLINARLTSEV 333
>gi|417399108|gb|JAA46584.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 333
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSG 215
+ + V F+G
Sbjct: 187 SSSPVIFAG 195
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 148 IAGIPQSIIECVKQICVVMLETL 170
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 252 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 308
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 309 SAASISLAQYLINARLSSE 327
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 241 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 292
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 293 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 327
>gi|194384644|dbj|BAG59482.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
>gi|417410200|gb|JAA51577.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 378
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 82
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 83 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 142
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 143 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 198
Query: 207 TYAGVFFSG 215
+ + V F+G
Sbjct: 199 SSSPVIFAG 207
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 102 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 159
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 160 IAGIPQSIIECVKQICVVMLETL 182
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 295 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 351
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 352 GSAASISLAQYLINVRLSSE 371
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 295 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 351
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 352 GSAASISLAQYLINVRLSSET 372
>gi|395851184|ref|XP_003798146.1| PREDICTED: poly(rC)-binding protein 3 [Otolemur garnettii]
Length = 361
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIVNSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
V S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 VNSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 287 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 343
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 344 QYLINARLTSEV 355
>gi|338720838|ref|XP_001488421.3| PREDICTED: poly(rC)-binding protein 3 [Equus caballus]
Length = 393
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 319 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 375
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 376 QYLINARLTSEV 387
>gi|222622454|gb|EEE56586.1| hypothetical protein OsJ_05944 [Oryza sativa Japonica Group]
Length = 674
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 12/165 (7%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N G +IGK G TI + Q QSGA+IQ++R + PG+ R + +SGT D+I RA L
Sbjct: 124 IPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQISRAEQL 183
Query: 101 VIDKLLTELHAEDQADDVGTK--------TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
I+++L E A + K + ++ + N+ G +IGK G TIKS S
Sbjct: 184 -INEVLAEADAASSGNLSSRKYNAPQPGADQFQMKIANNKVGLVIGKGGETIKSMQAKSG 242
Query: 153 AVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELILLKLSED 195
A I++ L H G +R V + GT ++ A +L++ SE+
Sbjct: 243 ARIQVVPL-HLPPGDPATERTVYIDGTQEQIETAKQLVIEVTSEN 286
>gi|443687982|gb|ELT90806.1| hypothetical protein CAPTEDRAFT_1308 [Capitella teleta]
Length = 333
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R ++ AG++IGK G + F+ SGA+I +S S +RI+ ++GT D+I +
Sbjct: 4 LRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISDSS-----CPERIVTVTGTTDQIFK 58
Query: 97 AVDLVIDKLLTEL-HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A ++ K ++ + + LRLIVP S CGS+IGK GA IK + + A I
Sbjct: 59 AFTMICKKFEEDIVNTHNSTTLPKPPVTLRLIVPASQCGSLIGKGGAKIKEIRELTGASI 118
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+++ +R VT++G D + + I + E + T+PY
Sbjct: 119 QVA--SEMLPNSTERAVTVSGQADAITQCIYNICCVMLESP--PKGATIPYR-------- 166
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKF--QNNKVLLP 256
P VPP + +P + GG+ F Q ++LLP
Sbjct: 167 ----PKPCVPPVM--LPSSC--------GGQAFSIQGQQILLP 195
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R +V G++IGKGG+ I + + +GA IQ+ + E P +T+R + +SG D
Sbjct: 84 PVTLRLIVPASQCGSLIGKGGAKIKEIRELTGASIQV--ASEMLPNSTERAVTVSGQADA 141
Query: 94 ILRAV 98
I + +
Sbjct: 142 ITQCI 146
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
+ N L G +IG+GG+ IN+ + SGA I+++ + E G++DR + I G+++ I
Sbjct: 273 IPNDLIGCIIGRGGAKINEIRQLSGATIKIANADE---GSSDRKVTIMGSLETI 323
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+ +PN G IIG+ GA I S A IKI+ D G +DR VT+ G+L+
Sbjct: 271 MTIPNDLIGCIIGRGGAKINEIRQLSGATIKIANADE---GSSDRKVTIMGSLE 321
>gi|61557337|ref|NP_001013241.1| poly(rC)-binding protein 2 [Rattus norvegicus]
gi|193083108|ref|NP_001122383.1| poly(rC)-binding protein 2 isoform d [Homo sapiens]
gi|6707736|sp|Q15366.1|PCBP2_HUMAN RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E2; Short=hnRNP E2
gi|460773|emb|CAA55015.1| hnRNP-E2 [Homo sapiens]
gi|50926841|gb|AAH78906.1| Poly(rC) binding protein 2 [Rattus norvegicus]
gi|119617116|gb|EAW96710.1| poly(rC) binding protein 2, isoform CRA_e [Homo sapiens]
Length = 365
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSG 215
+ + V F+G
Sbjct: 187 SSSPVIFAG 195
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 148 IAGIPQSIIECVKQICVVMLETL 170
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 282 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 338
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 339 GSAASISLAQYLINVRLSSE 358
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 282 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 338
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 339 GSAASISLAQYLINVRLSSET 359
>gi|354476790|ref|XP_003500606.1| PREDICTED: poly(rC)-binding protein 3 [Cricetulus griseus]
gi|149043674|gb|EDL97125.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043675|gb|EDL97126.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043676|gb|EDL97127.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043677|gb|EDL97128.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|344241934|gb|EGV98037.1| Poly(rC)-binding protein 3 [Cricetulus griseus]
Length = 371
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 297 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 353
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 354 QYLINARLTSEV 365
>gi|409082121|gb|EKM82479.1| hypothetical protein AGABI1DRAFT_33710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 365
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 98/177 (55%), Gaps = 19/177 (10%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPT---YIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR 67
+PD K ++ ++ ++ P P+ ++R L+ A +IGKGGS +N+ + +SGAR
Sbjct: 37 NPDSGDKAGSSYGEASTTAPAVPPSANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGAR 96
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV----GTKT- 122
+ +S E PG +RI+ +SG +D + +A L++ ++ D+ DV G++
Sbjct: 97 VMVS---ESIPGNPERILNVSGPLDAVSKAFGLIVRRI------NDEPFDVPSVPGSRAV 147
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++ ++PNS GS+IGK G+ IK D S A K++ + G +R++++ G D
Sbjct: 148 TIKFMIPNSRMGSVIGKGGSKIKEIQDASGA--KLNASEGMLPGSTERVLSVAGVAD 202
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 52/213 (24%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + I+F++ N G+VIGKGGS I + Q SGA+ L+ S PG+T+R++ ++G
Sbjct: 142 PGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAK--LNASEGMLPGSTERVLSVAG 199
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKT--------------------------- 122
D I A I +L E A+++ T
Sbjct: 200 VADAIHIAT-YYIGTILIE--AQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAP 256
Query: 123 ------------KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN-- 168
++ +PN G IIGK G+ I S + IKI + G N
Sbjct: 257 YGPPHNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGA 316
Query: 169 ------DRLVTLTGTLDEQMRALELILLKLSED 195
+RLV +TG A++L+ +L ++
Sbjct: 317 PGGSEGERLVVITGQPANIQMAVQLLYHRLEQE 349
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 24/128 (18%)
Query: 6 SSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSG 65
SSYVP H AP + P + T + + N L G +IGKGGS IN+ + S
Sbjct: 245 SSYVPGYSHH-----APYGPPHNPPQQLQTQ-QIYIPNDLVGCIIGKGGSKINEIRHMSA 298
Query: 66 ARIQLSRSHEFFPGTT-------------DRIIMISGTIDEILRAVDLVIDKLLTELHAE 112
++I++ PG T +R+++I+G I AV L+ +L E +
Sbjct: 299 SQIKI-----MEPGATGLGPNGAPGGSEGERLVVITGQPANIQMAVQLLYHRLEQEKQKQ 353
Query: 113 DQADDVGT 120
+A G+
Sbjct: 354 LRAQQGGS 361
>gi|440894425|gb|ELR46887.1| Poly(rC)-binding protein 3 [Bos grunniens mutus]
Length = 374
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 51 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 105
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 106 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 165
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 166 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 213
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 119 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 176
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 177 TERAVTISGTPDAIIQCVKQICVVML 202
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 300 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 356
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 357 QYLINARLTSEV 368
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 91 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 145
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 146 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 205
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 206 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 253
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 159 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 216
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 217 TERAVTISGTPDAIIQCVKQICVVML 242
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 353 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 409
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 410 QYLINARLTSEV 421
>gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform a [Homo sapiens]
gi|47940610|gb|AAH71942.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|119617115|gb|EAW96709.1| poly(rC) binding protein 2, isoform CRA_d [Homo sapiens]
Length = 366
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSG 215
+ + V F+G
Sbjct: 187 SSSPVIFAG 195
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 148 IAGIPQSIIECVKQICVVMLETL 170
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 283 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 339
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 340 GSAASISLAQYLINVRLSSE 359
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 283 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 339
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 340 GSAASISLAQYLINVRLSSET 360
>gi|395536909|ref|XP_003770451.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 361
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 287 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 343
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 344 QYLINARLTSEV 355
>gi|296081618|emb|CBI20623.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + N G +IGKGG TI Q QSGA+IQ++R + P + R++ + GT D+I
Sbjct: 136 TSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQI 195
Query: 95 LRAVDLVIDKLLTELHAEDQA-------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+A L+ D +L+E A G++ + + VPN+ G IIGK G TIK+
Sbjct: 196 AKAEQLIND-VLSEAEAGGSGIVSRRLTGQAGSE-QFVMKVPNNKVGLIIGKGGETIKNM 253
Query: 148 MDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
+ A I++ L D S +R V + GT ++ A +L+ +SE+ + + M
Sbjct: 254 QARTGARIQVIPLHLPPGDTSM----ERTVQIDGTSEQIESAKQLVNEVISENRIRNPAM 309
Query: 203 TVPYTYAGVFF---SGFHGMPYGAVP 225
Y G SG+ G P GA P
Sbjct: 310 AGGYPQQGYQARPPSGW-GAPPGAPP 334
>gi|395536907|ref|XP_003770450.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Sarcophilus
harrisii]
Length = 339
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 265 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 321
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 322 QYLINARLTSEV 333
>gi|380792087|gb|AFE67919.1| poly(rC)-binding protein 2 isoform g, partial [Macaca mulatta]
Length = 193
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D + +RL++ GSIIGK G ++K ++S A R++ S +R++TL
Sbjct: 8 DGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGA-----RINISEGNCPERIITLA 62
Query: 176 GTLDEQMRALELILLKLSEDTLYSQT 201
G + +A +I+ KL ED S T
Sbjct: 63 GPTNAIFKAFAMIIDKLEEDISSSMT 88
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
>gi|167535308|ref|XP_001749328.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772194|gb|EDQ85849.1| predicted protein [Monosiga brevicollis MX1]
Length = 689
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 23/199 (11%)
Query: 6 SSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSG 65
S+Y +PD G +DP +V AG +IG+GG TIN Q++SG
Sbjct: 191 SAYGTAPDGDG-----------ADPNANAETETMMVPAERAGFLIGRGGETINMIQTRSG 239
Query: 66 ARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA-------DDV 118
AR+++ + P +R++ + G + I RA +LV D L + A +A D+
Sbjct: 240 ARLKMVQED---PHAAERLLYMMGDAEAIKRARELVADLLAEKPSAPQEAPPMPTSYDEN 296
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND-RLVTLTGT 177
+L++ VP + G +IG+ G TI+ D+ I+ + D G ND R+ TLTG
Sbjct: 297 NRHLRLKIEVPGVAAGRVIGRGGETIRRIEADTGCRIQFDQADGVGLGPNDARIATLTGN 356
Query: 178 LDEQMRALELILLKLSEDT 196
D + A E ++ + D
Sbjct: 357 QD-AIEAAEQAIVGIIRDA 374
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP S D + ++ V AG VIG+GG TI ++ +G RIQ ++ G
Sbjct: 286 APPMPTSYDENNRHLRLKIEVPGVAAGRVIGRGGETIRRIEADTGCRIQFDQADGVGLGP 345
Query: 81 TD-RIIMISGTIDEILRAVDLVIDKLLTELHAED------QADDVGTKTKLRLIVPNSSC 133
D RI ++G D I A + I ++ + D +AD T T + +P
Sbjct: 346 NDARIATLTGNQDAI-EAAEQAIVGIIRDAERPDAGPPSRRADSRPTDT---IAIPAERA 401
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
G IIGK G TI+S D + ++ LD + N+++ + G D+
Sbjct: 402 GFIIGKGGETIRSIQDQTGVHLE---LDRNSEAGNEKIFIIRGNPDQ 445
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 43/191 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V G +IG+GG TIN Q+QSG+RIQ+++ G R ++G D + R
Sbjct: 98 VEMTVPGAHVGRIIGRGGETINRLQNQSGSRIQVAQDL----GQPMRPCTLTGVPDSVQR 153
Query: 97 AVDLVIDKLLTELHAE--------------------------------DQADDVGTKTKL 124
A ++I++++ E H + D AD
Sbjct: 154 A-KVLIEEIVRE-HMQPFGPGAGGPGGNASGPTTASLMASAYGTAPDGDGADPNANAETE 211
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD-HSYYGLNDRLVTLTGTLDEQMR 183
++VP G +IG+ G TI S A +K+ + D H+ +RL+ + G + R
Sbjct: 212 TMMVPAERAGFLIGRGGETINMIQTRSGARLKMVQEDPHAA----ERLLYMMGDAEAIKR 267
Query: 184 ALELILLKLSE 194
A EL+ L+E
Sbjct: 268 ARELVADLLAE 278
>gi|402225510|gb|EJU05571.1| hypothetical protein DACRYDRAFT_20011 [Dacryopinax sp. DJM-731 SS1]
Length = 413
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 87/152 (57%), Gaps = 8/152 (5%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
+P + ++R L+ A +IGKGGS +N+ + +SGARI +S E PG +RI+ ++
Sbjct: 116 EPPPQNIHMRALIVTQDASIIIGKGGSHVNEIREKSGARITVS---ESIPGNPERILNVT 172
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSF 147
G +D + +A L++ ++ E +Q G++ ++ I+PNS G++IGKAG+ IK
Sbjct: 173 GPLDAVAKAFGLIVRQINDEPF--EQPSVPGSRAVTIKFIIPNSRMGTLIGKAGSKIKEI 230
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+ S A K+ + G +R++ ++G D
Sbjct: 231 QEASGA--KLHASEGLLPGSTERVLNVSGVAD 260
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 90/224 (40%), Gaps = 53/224 (23%)
Query: 23 VKSLSSDPTEKPTY-------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
V+ ++ +P E+P+ I+F++ N G +IGK GS I + Q SGA++ S
Sbjct: 186 VRQINDEPFEQPSVPGSRAVTIKFIIPNSRMGTLIGKAGSKIKEIQEASGAKLHASEG-- 243
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLL------TELHAEDQAD------------- 116
PG+T+R++ +SG D I A V + LL + HA +
Sbjct: 244 LLPGSTERVLNVSGVADAIHIATYYVGNSLLNSHPSYSSTHASYKQQRRPMASTTYYPPN 303
Query: 117 ----------------DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL 160
V + +PN GSIIGK GA I S IKI
Sbjct: 304 TPVSNYGYPGPAAAPAPVSLQQTQNFYIPNDLVGSIIGKGGAKINEIRHVSGCQIKILEP 363
Query: 161 DH---------SYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+R+VT+TG + A++L+ ++ ++
Sbjct: 364 GQGPAPGSGAVQPMSETERMVTITGGIANIQMAVQLLASRIEQE 407
>gi|395536911|ref|XP_003770452.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Sarcophilus
harrisii]
Length = 318
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 244 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 300
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 301 QYLINARLTSEV 312
>gi|58865460|ref|NP_001011945.1| poly(rC)-binding protein 3 [Rattus norvegicus]
gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 [Rattus norvegicus]
Length = 319
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 245 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 301
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 302 QYLINARLTSEV 313
>gi|355560220|gb|EHH16906.1| hypothetical protein EGK_13160 [Macaca mulatta]
Length = 361
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 287 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 343
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 344 QYLINARLTSEV 355
>gi|193248243|dbj|BAC04327.2| unnamed protein product [Homo sapiens]
Length = 319
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 245 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 301
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 302 QYLINARLTSEV 313
>gi|417398902|gb|JAA46484.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 320
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 26/206 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSGFHGMPYG-----AVPPP 227
+ + V F+G G Y A+P P
Sbjct: 187 SSSPVIFAG--GQAYTIQGQYAIPQP 210
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 66/230 (28%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q++ + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKL-------------------------------------- 105
I+G +I E ++ + +V+ +
Sbjct: 148 IAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAI 207
Query: 106 ----LTELH--AEDQAD--------------DVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
LT+LH A Q+ D T+T L +PN+ G IIG+ GA I
Sbjct: 208 PQPDLTKLHQLAMQQSHFPMTHGNTGFSASLDASTQTTHELTIPNNLIGCIIGRQGANIN 267
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ + G + R VT+TG+ A LI +LS +
Sbjct: 268 EIRQMSGAQIKIA---NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 314
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S D + + T+ + N L G +IG+ G+ IN+ + SGA+I+++ E G++ R
Sbjct: 235 SASLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE---GSSGRQ 290
Query: 85 IMISGTIDEILRAVDLVIDKLLTE 108
+ I+G+ I A L+ +L +E
Sbjct: 291 VTITGSAASISLAQYLINARLSSE 314
>gi|363747261|ref|XP_003643959.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Gallus
gallus]
Length = 348
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 276 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 332
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 333 GSAASISLAQYLI 345
>gi|318054596|ref|NP_001188110.1| poly(rC)-binding protein 2 [Ictalurus punctatus]
gi|308322769|gb|ADO28522.1| poly(rc)-binding protein 2 [Ictalurus punctatus]
Length = 318
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPLSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP 241
+ V F+G G Y A+P P H A P
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 97/229 (42%), Gaps = 63/229 (27%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGG I + + +GA++Q++ + P +T+R
Sbjct: 88 SNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERA 145
Query: 85 IMISGT---IDEILRAVDLVIDKL------------------------------------ 105
I I+GT I E ++ + +V+ +
Sbjct: 146 ITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQ 205
Query: 106 --LTELH--AEDQAD--------------DVGTKT-KLRLIVPNSSCGSIIGKAGATIKS 146
LT+LH A Q+ D T+T L +PN G IIG+ GA I
Sbjct: 206 PDLTKLHQLAMQQSPFPLAPSSQGFTAGMDATTQTGSHELTIPNDLIGCIIGRQGAKINE 265
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ + G NDR VT+TG+ A LI +LS +
Sbjct: 266 IRQMSGAQIKIA---NPVEGSNDRQVTITGSPASISLAEYLINARLSSE 311
>gi|387915508|gb|AFK11363.1| alphaCP-3 [Callorhinchus milii]
Length = 349
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K +++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGMPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG 215
A V F+G
Sbjct: 185 APVIFAG 191
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 25 SLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
S+++ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+
Sbjct: 86 SMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTE 143
Query: 83 RIIMISGTIDEILRAVDLVIDKLL 106
R + ISG D I++ V + +L
Sbjct: 144 RAVTISGMPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+T+R I I+G+ I A
Sbjct: 275 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSTERQITITGSPANISLA 331
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 332 QYLINARLTSEV 343
>gi|392558575|gb|EIW51762.1| hypothetical protein TRAVEDRAFT_156921 [Trametes versicolor
FP-101664 SS1]
Length = 378
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 12/182 (6%)
Query: 3 TNESSYVPSPDVHGKRST----APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
+ +S PS + G S AP S P ++R L+ A +IGK GS +N
Sbjct: 27 ADRASGDPSTEAQGDGSATTSGAPSSSGQPTPPAANIHMRCLIVTQDASIIIGKAGSHVN 86
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV 118
+ + +SGAR+ +S E PG +RI+ +SG +D + +A L++ ++ E D+
Sbjct: 87 EIREKSGARVVVS---ESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPF--DKPSVP 141
Query: 119 GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
G++ ++ ++PNS GS+IGK G IK + S A + S + G +RL++++G
Sbjct: 142 GSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQEASGARLNAS--ETMLPGSTERLLSVSGV 199
Query: 178 LD 179
D
Sbjct: 200 AD 201
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 9/79 (11%)
Query: 23 VKSLSSDPTEKPTY-------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
V+ ++ +P +KP+ I+F++ N G+VIGKGG+ I + Q SGAR L+ S
Sbjct: 127 VRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQEASGAR--LNASET 184
Query: 76 FFPGTTDRIIMISGTIDEI 94
PG+T+R++ +SG D I
Sbjct: 185 MLPGSTERLLSVSGVADAI 203
>gi|363747263|ref|XP_003643960.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Gallus
gallus]
Length = 349
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 333
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 334 GSAASISLAQYLI 346
>gi|344306639|ref|XP_003421993.1| PREDICTED: poly(rC)-binding protein 3 [Loxodonta africana]
Length = 396
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 73 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 127
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 128 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 187
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 188 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 235
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 141 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 198
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 199 TERAVTISGTPDAIIQCVKQICVVML 224
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+G+ I A
Sbjct: 322 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGSPANISLA 378
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 379 QYLINARLTSEV 390
>gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]
Length = 361
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 287 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 343
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 344 QYLINARLTSEV 355
>gi|410969851|ref|XP_003991405.1| PREDICTED: poly(rC)-binding protein 3 [Felis catus]
Length = 361
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 287 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 343
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 344 QYLINARLTSEV 355
>gi|115495373|ref|NP_001069752.1| poly(rC)-binding protein 3 [Bos taurus]
gi|301767382|ref|XP_002919105.1| PREDICTED: poly(rC)-binding protein 3-like [Ailuropoda melanoleuca]
gi|359323604|ref|XP_848733.3| PREDICTED: poly(rC)-binding protein 3 [Canis lupus familiaris]
gi|109659150|gb|AAI18167.1| Poly(rC) binding protein 3 [Bos taurus]
gi|296490840|tpg|DAA32953.1| TPA: poly(rC) binding protein 3 [Bos taurus]
Length = 361
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 287 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 343
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 344 QYLINARLTSEV 355
>gi|426199945|gb|EKV49869.1| hypothetical protein AGABI2DRAFT_63586 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 89/160 (55%), Gaps = 16/160 (10%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
+ S+ P ++R L+ A +IGKGGS +N+ + +SGAR+ +S E PG +RI
Sbjct: 54 TASAVPPSANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVS---ESIPGNPERI 110
Query: 85 IMISGTIDEILRAVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSCGSIIGK 139
+ +SG +D + +A L++ ++ D+ DV G++ ++ ++PNS GS+IGK
Sbjct: 111 LNVSGPLDAVSKAFGLIVRRI------NDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGK 164
Query: 140 AGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
G+ IK D S A K++ + G +R++++ G D
Sbjct: 165 GGSKIKEIQDASGA--KLNASEGMLPGSTERVLSVAGVAD 202
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 52/213 (24%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + I+F++ N G+VIGKGGS I + Q SGA+ L+ S PG+T+R++ ++G
Sbjct: 142 PGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAK--LNASEGMLPGSTERVLSVAG 199
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKT--------------------------- 122
D I A I +L E A+++ T
Sbjct: 200 VADAIHIAT-YYIGTILIE--AQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAP 256
Query: 123 ------------KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN-- 168
++ +PN G IIGK G+ I S + IKI + G N
Sbjct: 257 YGPPHNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGA 316
Query: 169 ------DRLVTLTGTLDEQMRALELILLKLSED 195
+RLV +TG A++L+ +L ++
Sbjct: 317 PGGSEGERLVVITGQPANIQMAVQLLYHRLEQE 349
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 24/128 (18%)
Query: 6 SSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSG 65
SSYVP H AP + P + T + + N L G +IGKGGS IN+ + S
Sbjct: 245 SSYVPGYSHH-----APYGPPHNPPQQLQTQ-QIYIPNDLVGCIIGKGGSKINEIRHMSA 298
Query: 66 ARIQLSRSHEFFPGTT-------------DRIIMISGTIDEILRAVDLVIDKLLTELHAE 112
++I++ PG T +R+++I+G I AV L+ +L E +
Sbjct: 299 SQIKI-----MEPGATGLGPNGAPGGSEGERLVVITGQPANIQMAVQLLYHRLEQEKQKQ 353
Query: 113 DQADDVGT 120
+A G+
Sbjct: 354 LRAQQGGS 361
>gi|126345443|ref|XP_001362482.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Monodelphis
domestica]
gi|351706147|gb|EHB09066.1| Poly(rC)-binding protein 2 [Heterocephalus glaber]
gi|440900676|gb|ELR51755.1| Poly(rC)-binding protein 2, partial [Bos grunniens mutus]
Length = 351
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 335
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 336 GSAASISLAQYLI 348
>gi|148699884|gb|EDL31831.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699885|gb|EDL31832.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699886|gb|EDL31833.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699889|gb|EDL31836.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699890|gb|EDL31837.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|149043678|gb|EDL97129.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043679|gb|EDL97130.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043680|gb|EDL97131.1| rCG61051, isoform CRA_b [Rattus norvegicus]
Length = 339
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 265 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 321
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 322 QYLINARLTSEV 333
>gi|193083112|ref|NP_001122385.1| poly(rC)-binding protein 2 isoform f [Homo sapiens]
gi|66911068|gb|AAH97410.1| Pcbp2 protein [Rattus norvegicus]
gi|78395095|gb|AAI07689.1| PCBP2 protein [Homo sapiens]
gi|417399138|gb|JAA46599.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 335
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSG 215
+ + V F+G
Sbjct: 187 SSSPVIFAG 195
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 148 IAGIPQSIIECVKQICVVMLETL 170
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 252 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 308
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 309 GSAASISLAQYLINVRLSSE 328
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 252 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 308
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 309 GSAASISLAQYLINVRLSSET 329
>gi|347300276|ref|NP_001231441.1| poly(rC) binding protein 2 [Sus scrofa]
gi|417399505|gb|JAA46755.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 353
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSG 215
+ + V F+G
Sbjct: 187 SSSPVIFAG 195
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 148 IAGIPQSIIECVKQICVVMLETL 170
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 326
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 327 GSAASISLAQYLINVRLSSE 346
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 326
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 327 GSAASISLAQYLINVRLSSET 347
>gi|9957165|gb|AAG09240.1|AF176329_1 alphaCP-3 [Homo sapiens]
Length = 339
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 265 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 321
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 322 QYLINARLTSEV 333
>gi|395752934|ref|XP_002830848.2| PREDICTED: poly(rC)-binding protein 3 [Pongo abelii]
Length = 432
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 15/164 (9%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK G T+ + +SGARI +S + +RI+ I+G D I +A ++ K
Sbjct: 56 GSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFKAFAMIAYKFE 110
Query: 107 TELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDH 162
++ +K LRL+VP S CGS+IGK G+ IK + + A ++++ L +
Sbjct: 111 EDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN 170
Query: 163 SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 171 S----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 208
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 114 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 171
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 172 TERAVTISGTPDAIIQCVKQICVVML 197
>gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis]
Length = 319
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 90/228 (39%), Gaps = 64/228 (28%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q++ + P +T+R I
Sbjct: 90 STASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+G I+ V + +
Sbjct: 148 IAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPD 207
Query: 106 LTELH--AEDQA----------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
LT+LH A Q+ D T L +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQATSHELTIPNDLIGCIIGRQGAKINEI 267
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ + G NDR VT+TG+ A LI ++LS +
Sbjct: 268 RQMSGAQIKIA---NPVEGSNDRQVTITGSTASISLAQYLINVRLSSE 312
>gi|9957161|gb|AAG09238.1|AF176327_1 alphaCP-3 [Mus musculus]
Length = 339
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D + ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIFQCVKQICVVMLESP--PKGATIPY 178
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I + V + +L
Sbjct: 142 TERAVTISGTPDAIFQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 265 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 321
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 322 QYLINARLTSEV 333
>gi|317418810|emb|CBN80848.1| PolyrC-binding protein 2 [Dicentrarchus labrax]
Length = 306
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP 241
+ V F+G G Y A+P P H A P
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 62/208 (29%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+GT I+ V + +
Sbjct: 148 IAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPD 207
Query: 106 LTELH--AEDQA--------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
LT+LH A Q+ D + + +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSPFPIAPSNQGFTGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGT 177
S A IKI+ + G DR VT+TG+
Sbjct: 268 MSGAQIKIA---NPVDGSTDRQVTITGS 292
>gi|348528761|ref|XP_003451884.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 317
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP 241
+ V F+G G Y A+P P H A P
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 62/226 (27%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+GT I+ V + +
Sbjct: 148 IAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPD 207
Query: 106 LTELH--AEDQA--------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
LT+LH A Q+ D + + +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSPFPIAPSNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ + G DR VT+TG+ A LI +LS +
Sbjct: 268 MSGAQIKIA---NPVDGSTDRQVTITGSPASISLAEYLINARLSSE 310
>gi|392595587|gb|EIW84910.1| hypothetical protein CONPUDRAFT_117160 [Coniophora puteana
RWD-64-598 SS2]
Length = 378
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 103/198 (52%), Gaps = 31/198 (15%)
Query: 2 ETNESSYVPSPDVHGKR------------STAPVKSLSSDPTEKPT---YIRFLVSNPLA 46
+TN S+ P+P ++ +T+ S S++P + ++R L+ A
Sbjct: 10 DTNASTPSPNPASSARKEDGSDDAVRSLATTSAAPSASTNPNAPASAMIHMRCLIVTQDA 69
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
+IGKGG+ +N+ + +SGAR+ +S E PG +RI+ +SG +D + +A L++ ++
Sbjct: 70 SIIIGKGGTHVNEIREKSGARVVVS---ESIPGNPERILNVSGPLDAVSKAFGLIVRRI- 125
Query: 107 TELHAEDQADDV----GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
D+ DV G++ ++ ++PNS GS+IGK G+ IK D S A + S +
Sbjct: 126 -----NDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLNAS--E 178
Query: 162 HSYYGLNDRLVTLTGTLD 179
G +R++++ G D
Sbjct: 179 GMLPGSTERVLSVAGVAD 196
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S P + I+F++ N G+VIGK GS I + Q SGAR L+ S PG+T+R++ +
Sbjct: 134 SVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGAR--LNASEGMLPGSTERVLSV 191
Query: 88 SGTIDEI 94
+G D I
Sbjct: 192 AGVADAI 198
>gi|327260862|ref|XP_003215252.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 339
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 146 VTISGTPDAIIQCVKQICVVML 167
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 265 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 321
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 322 QYLINARLTSEV 333
>gi|432857624|ref|XP_004068722.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 317
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP 241
+ V F+G G Y A+P P H A P
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 62/226 (27%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+GT I+ V + +
Sbjct: 148 IAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPD 207
Query: 106 LTELH--AEDQA--------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
LT+LH A Q+ D + + +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSPFPIAPSNQGFTGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ + G DR VT+TG+ A LI +LS +
Sbjct: 268 MSGAQIKIA---NPVDGSTDRQVTITGSPASISLAEYLINARLSSE 310
>gi|62087230|dbj|BAD92062.1| poly(rC)-binding protein 2 isoform b variant [Homo sapiens]
Length = 373
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 82
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 83 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 142
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 143 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 196
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 197 SPVIFAG 203
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 102 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 159
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 160 IAGIPQSIIECVKQICVVML 179
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 290 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 346
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 347 GSAASISLAQYLINVRLSSE 366
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 290 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 346
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 347 GSAASISLAQYLINVRLSSET 367
>gi|390597786|gb|EIN07185.1| hypothetical protein PUNSTDRAFT_53562 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 356
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 8/145 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+ A +IGKGG+ +N+ + +SGAR+ +S E PG +RI+ +SG +D +
Sbjct: 55 HMRCLIVTQDASIIIGKGGAHVNEIRQKSGARVVVS---ESIPGNPERILNVSGPLDAVS 111
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L++ ++ E D A G++ ++ ++PNS GS+IGK G+ IK + S A
Sbjct: 112 KAFGLIVRRINDEPF--DSASVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQEASGAR 169
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLD 179
+ S + G +R+++++G D
Sbjct: 170 LNAS--EGMLPGSTERVLSVSGVAD 192
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 50/217 (23%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
+S P + I+F++ N G+VIGKGGS I + Q SGAR L+ S PG+T+R++
Sbjct: 129 ASVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQEASGAR--LNASEGMLPGSTERVLS 186
Query: 87 ISGTIDEILRAV----DLVIDKLLTELHAEDQADDV------------------------ 118
+SG D I A +++I+ + HA + +
Sbjct: 187 VSGVADAIHIATYYIGNILIEANERQPHAANSSYRPSSYSRRPPYPATGGSSYVPGYTNP 246
Query: 119 -----------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI--------SR 159
G ++ +PN G IIGK GA I S + IKI +
Sbjct: 247 YPPPTAAALAHGQLQTQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGATGQAG 306
Query: 160 LDHSYYGL-NDRLVTLTGTLDEQMRALELILLKLSED 195
D + G N+RLV +TG A++L+ +L ++
Sbjct: 307 ADGAPAGSENERLVVITGAPANIQMAVQLLYSRLEQE 343
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 23/95 (24%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT--------------DR 83
+ + N L G +IGKGG+ IN+ + S ++I++ PG T +R
Sbjct: 264 QIYIPNDLVGCIIGKGGAKINEIRHMSASQIKI-----MEPGATGQAGADGAPAGSENER 318
Query: 84 IIMISGTIDEILRAVDLVIDKLLTE----LHAEDQ 114
+++I+G I AV L+ +L E L A+ Q
Sbjct: 319 LVVITGAPANIQMAVQLLYSRLEQEKQKQLRAQQQ 353
>gi|336465527|gb|EGO53767.1| hypothetical protein NEUTE1DRAFT_119308 [Neurospora tetrasperma
FGSC 2508]
gi|350295174|gb|EGZ76151.1| eukaryotic type KH-domain (KH-domain type I) [Neurospora
tetrasperma FGSC 2509]
Length = 481
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
Query: 15 HGKRSTA--PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
HG RS A PV + D T ++R ++S+P A +IGKGG ++ + S A+ +S
Sbjct: 104 HGARSRAQPPVSAQPHDETAW-IHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVS- 161
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNS 131
++ G +RI+ +SG +D + +A L+I L E AE + +KT LRL++P+
Sbjct: 162 --DYQKGAVERILTVSGVVDAVAKAFGLIIRTLNNEPLAE--PSNTHSKTYPLRLLIPHV 217
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKIS 158
GSIIGK GA IK + S A + S
Sbjct: 218 LIGSIIGKGGARIKEIQEASGARLNAS 244
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 189 IRTLNNEPLAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGARLNASDS-- 246
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 247 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 281
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTG 176
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TG
Sbjct: 403 AGAALTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITG 458
Query: 177 TLDEQMRALELILLKLSEDTLYS 199
T + AL L+ +L + S
Sbjct: 459 TEECNRMALYLLYQRLESEKHRS 481
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT + A
Sbjct: 410 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEECNRMA 466
Query: 98 VDLVIDKLLTELH 110
+ L+ +L +E H
Sbjct: 467 LYLLYQRLESEKH 479
>gi|85111179|ref|XP_963814.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|28925551|gb|EAA34578.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|38566984|emb|CAE76284.1| related to hnRNP protein E2 [Neurospora crassa]
Length = 489
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
Query: 15 HGKRSTA--PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
HG RS A PV + D T ++R ++S+P A +IGKGG ++ + S A+ +S
Sbjct: 104 HGARSRAQPPVSAQPHDETAW-IHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVS- 161
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNS 131
++ G +RI+ +SG +D + +A L+I L E AE + +KT LRL++P+
Sbjct: 162 --DYQKGAVERILTVSGVVDAVAKAFGLIIRTLNNEPLAE--PSNTHSKTYPLRLLIPHV 217
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKIS 158
GSIIGK GA IK + S A + S
Sbjct: 218 LIGSIIGKGGARIKEIQEASGARLNAS 244
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 189 IRTLNNEPLAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGARLNASDS-- 246
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 247 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 281
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTG 176
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TG
Sbjct: 403 AGAALTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITG 458
Query: 177 TLDEQMRALELILLKLSE 194
T + AL L+ +L E
Sbjct: 459 TEECNRMALYLLYQRLGE 476
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +E R
Sbjct: 410 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGT-EECNRM 465
Query: 98 VDLVIDKLLTELH 110
++ + L EL
Sbjct: 466 ALYLLYQRLGELQ 478
>gi|426218401|ref|XP_004003435.1| PREDICTED: poly(rC)-binding protein 3 isoform 4 [Ovis aries]
Length = 332
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 15/185 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG-- 210
++++ L +S +R VT++GT D ++ ++ I + + E T+ V A
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESPRKGVTVVVAPKPASTP 186
Query: 211 VFFSG 215
V F+G
Sbjct: 187 VIFAG 191
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 258 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 314
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 315 QYLINARLTSEV 326
>gi|291327528|ref|NP_001167544.1| poly(rC)-binding protein 2 isoform 4 [Mus musculus]
gi|348581081|ref|XP_003476306.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cavia porcellus]
gi|74149644|dbj|BAE36444.1| unnamed protein product [Mus musculus]
gi|194378584|dbj|BAG63457.1| unnamed protein product [Homo sapiens]
gi|417398924|gb|JAA46495.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 322
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 26/206 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSGFHGMPYG-----AVPPP 227
+ + V F+G G Y A+P P
Sbjct: 187 SSSPVIFAG--GQAYTIQGQYAIPQP 210
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 67/232 (28%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q++ + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKL-------------------------------------- 105
I+G +I E ++ + +V+ +
Sbjct: 148 IAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAI 207
Query: 106 ----LTELH--AEDQA---------------DDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
LT+LH A Q+ D T L +PN G IIG+ GA I
Sbjct: 208 PQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 267
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
S A IKI+ + G DR VT+TG+ A LI ++LS +T
Sbjct: 268 NEIRQMSGAQIKIA---NPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 316
>gi|431893776|gb|ELK03594.1| Poly(rC)-binding protein 3 [Pteropus alecto]
Length = 339
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMRDESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 178
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 265 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 321
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 322 QYLINARLTSEV 333
>gi|225429462|ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + N G +IGKGG TI Q QSGA+IQ++R + P + R++ + GT D+I
Sbjct: 136 TSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQI 195
Query: 95 LRAVDLVIDKLLTELHAEDQA-------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+A L+ D +L+E A G++ + + VPN+ G IIGK G TIK+
Sbjct: 196 AKAEQLIND-VLSEAEAGGSGIVSRRLTGQAGSE-QFVMKVPNNKVGLIIGKGGETIKNM 253
Query: 148 MDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
+ A I++ L D S +R V + GT ++ A +L+ +SE+ + + M
Sbjct: 254 QARTGARIQVIPLHLPPGDTSM----ERTVQIDGTSEQIESAKQLVNEVISENRIRNPAM 309
Query: 203 TVPYTYAGVFF---SGFHGMPYGAVP 225
Y G SG+ G P GA P
Sbjct: 310 AGGYPQQGYQARPPSGW-GAPPGAPP 334
>gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform b [Homo sapiens]
gi|157041229|ref|NP_001096635.1| poly(rC)-binding protein 2 isoform 1 [Mus musculus]
gi|73996203|ref|XP_534789.2| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Canis lupus
familiaris]
gi|149714829|ref|XP_001504573.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Equus caballus]
gi|297692024|ref|XP_002823365.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pongo abelii]
gi|301775803|ref|XP_002923308.1| PREDICTED: poly(rC)-binding protein 2-like [Ailuropoda melanoleuca]
gi|332206039|ref|XP_003252097.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Nomascus
leucogenys]
gi|332839234|ref|XP_003313706.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pan troglodytes]
gi|395541533|ref|XP_003772697.1| PREDICTED: poly(rC)-binding protein 2 [Sarcophilus harrisii]
gi|403296804|ref|XP_003939285.1| PREDICTED: poly(rC)-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410964553|ref|XP_003988818.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Felis catus]
gi|426224368|ref|XP_004006343.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Ovis aries]
gi|426372753|ref|XP_004053282.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Gorilla gorilla
gorilla]
gi|2500577|sp|Q61990.1|PCBP2_MOUSE RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=CTBP; Short=CBP; AltName: Full=Putative
heterogeneous nuclear ribonucleoprotein X; Short=hnRNP X
gi|436894|gb|AAA03705.1| nucleic acid binding protein [Mus musculus]
gi|12654635|gb|AAH01155.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|13172240|gb|AAK14059.1| alpha-CP2 [Mus musculus]
gi|50925529|gb|AAH78909.1| Pcbp2 protein [Rattus norvegicus]
gi|119617113|gb|EAW96707.1| poly(rC) binding protein 2, isoform CRA_b [Homo sapiens]
gi|148672029|gb|EDL03976.1| poly(rC) binding protein 2, isoform CRA_c [Mus musculus]
gi|149031920|gb|EDL86832.1| rCG50739, isoform CRA_a [Rattus norvegicus]
gi|158257714|dbj|BAF84830.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 335
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 336 GSAASISLAQYLINVRLSSE 355
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 335
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 336 GSAASISLAQYLINVRLSSET 356
>gi|354490191|ref|XP_003507243.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cricetulus
griseus]
gi|344239259|gb|EGV95362.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 362
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+ + E G+TDR + I+
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVE---GSTDRQVTIT 335
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 336 GSAASISLAQYLINVRLSSE 355
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IK + + G DR VT+T
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTA---NPVEGSTDRQVTIT 335
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 336 GSAASISLAQYLINVRLSSET 356
>gi|405976740|gb|EKC41236.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Crassostrea
gigas]
Length = 416
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
LV + GA+IGK G TI++ S+S AR+ + R +TD ++ I G+ + +A
Sbjct: 12 ILVGSEYVGAIIGKQGQTIHNITSESRARVDIHRRDGL---STDTLVTIKGSPENCSKAC 68
Query: 99 DLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
++ + +E + ++ + L++I PNS CG IIGK G IKSFM+ + I +S
Sbjct: 69 KEIMKIVESEAQSLNKGE-----PPLKIICPNSLCGRIIGKQGNVIKSFMEQTGTHIVVS 123
Query: 159 RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
DR++T+TG+ + +A L+ K+ + + Q T G+F
Sbjct: 124 SATDMNNFFVDRVITITGSPENTSKAEALVSEKMRK--CFEQDAQNYNTQMGMF 175
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 85/229 (37%), Gaps = 63/229 (27%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ + N L G +IGK G+ I F Q+G I +S + + DR+I I+G+ + +
Sbjct: 89 LKIICPNSLCGRIIGKQGNVIKSFMEQTGTHIVVSSATDMNNFFVDRVITITGSPENTSK 148
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKL-------------------------------- 124
A LV +K+ E A + T+ +
Sbjct: 149 AEALVSEKMRKCF--EQDAQNYNTQMGMFGGMPPMPNMMPPYNFQRGPPYPPYQMQGDGF 206
Query: 125 ---------------RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYG- 166
L +P S+ G+ IG G+ IK M S A IKI ++ G
Sbjct: 207 YYGQGGPPQQDLEVTYLYIPESTVGACIGSKGSNIKEIMRLSGARIKIENPQMQSGKNGD 266
Query: 167 -----------LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
L +R V +TGT + Q +A + K+ + + + V
Sbjct: 267 MNGDRKGPTPPLEERKVIITGTAEAQWKAQFYVFDKIKTEGGFQRIEEV 315
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 17/125 (13%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEF--------------FPGTTDRIIMISGTID 92
GA IG GS I + SGARI++ P +R ++I+GT +
Sbjct: 231 GACIGSKGSNIKEIMRLSGARIKIENPQMQSGKNGDMNGDRKGPTPPLEERKVIITGTAE 290
Query: 93 EILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
+A V DK+ TE + ++V ++++ +VP S G IIGK G ++ S
Sbjct: 291 AQWKAQFYVFDKIKTE-GGFQRIEEVHLRSEV--LVPRSMIGRIIGKGGQNVREMQRVSG 347
Query: 153 AVIKI 157
A++K+
Sbjct: 348 AIVKV 352
>gi|328712758|ref|XP_003244898.1| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 10/143 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+++ G VIG G T+ + +SQSGAR+ +S T +RI++ISG I R
Sbjct: 30 IRILLNSREVGNVIGIRGETVKNIRSQSGARVLISNGS-----TPERIVIISGNTIAICR 84
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT--KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A +L+ K+ E + +G KT L+LIVP S CG IIGK G+ I+ D S+A
Sbjct: 85 ATELIGLKV-EEFSERLNGNWIGPKTPLTLKLIVPASQCGFIIGKNGSKIREIRDSSRAA 143
Query: 155 IKISRLDHSYYGLNDRLVTLTGT 177
I + + +RLV++TGT
Sbjct: 144 ILVG--SNMLPNSTERLVSITGT 164
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P ++ +V G +IGK GS I + + S A I + P +T+R++ I+GT
Sbjct: 110 PLTLKLIVPASQCGFIIGKNGSKIREIRDSSRAAILV--GSNMLPNSTERLVSITGTTGT 167
Query: 94 ILRAVDLVIDKLL 106
I V LV + LL
Sbjct: 168 ISHCVYLVCNVLL 180
>gi|326935820|ref|XP_003213964.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Meleagris
gallopavo]
Length = 232
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 23/219 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ D + R
Sbjct: 21 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTDAVFR 75
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
AV ++ KL +L A T LRL++P S CGS+IGKAG I+ + S A ++
Sbjct: 76 AVSMIAFKLEEDLGDGTAAGR--TPVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQ 133
Query: 157 ISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAG 210
++ L +S +R VT++G D ++ + I + E + T+PY +
Sbjct: 134 VAGDLLPNS----TERAVTVSGVPDTIIQCVRQICAVILESP--PKGATIPYHPGLSLGT 187
Query: 211 VFFSGFHGMP----YGAVPPPVPAVPHNTAAHYGPNMGG 245
+ S G Y V P ++ + +G N GG
Sbjct: 188 ILLSANQGFSMQGQYSGVSPAEVSLYQPCSLVHGANPGG 226
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + SGA++Q+ + + P +T+R + +SG D
Sbjct: 98 PVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQV--AGDLLPNSTERAVTVSGVPDT 155
Query: 94 ILRAVDLVIDKLL 106
I++ V + +L
Sbjct: 156 IIQCVRQICAVIL 168
>gi|193083110|ref|NP_001122384.1| poly(rC)-binding protein 2 isoform e [Homo sapiens]
gi|291389255|ref|XP_002711064.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
gi|348581079|ref|XP_003476305.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cavia porcellus]
gi|184186908|gb|ACC69194.1| poly(rC) binding protein 2 [Mus musculus]
gi|208967068|dbj|BAG73548.1| poly(rC) binding protein 2 [synthetic construct]
Length = 361
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 278 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 334
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 335 GSAASISLAQYLINVRLSSE 354
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 278 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 334
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 335 GSAASISLAQYLINVRLSSET 355
>gi|209156062|gb|ACI34263.1| PolyrC-binding protein 2 [Salmo salar]
Length = 318
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP 241
+ V F+G G Y A+P P H A P
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+GT I+ V + +L
Sbjct: 148 IAGTPQSIIECVKQICVVML 167
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + + + N L G +IG+ GS IN+ + SGA+I+++ E G+ DR + I+
Sbjct: 235 DASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANPVE---GSADRQVTIT 291
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 292 GSAASISLAEYLINARLSSE 311
>gi|66472276|ref|NP_001018567.1| poly(rC) binding protein 3 [Danio rerio]
gi|63101380|gb|AAH95089.1| Poly(rC) binding protein 3 [Danio rerio]
gi|182890686|gb|AAI65090.1| Pcbp3 protein [Danio rerio]
Length = 241
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT + ++ ++ I + + E + T+PY
Sbjct: 133 VQVAGDMLPNS----TERAVTISGTPEAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 186
Query: 209 AGVFFSG 215
V FSG
Sbjct: 187 TPVIFSG 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 86 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV--AGDMLPNS 143
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT + I++ V + +L
Sbjct: 144 TERAVTISGTPEAIIQCVKQICVVML 169
>gi|406697218|gb|EKD00483.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 8904]
Length = 793
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 11/193 (5%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S+P + +R L+ A +IG+ G+ +N+ + +SGAR+ +S S PG +RI+ +
Sbjct: 81 SEPPAQQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISES---IPGNPERILNV 137
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKS 146
G +D + +A L++ ++ E D A G++ ++ I+PNS GS+IG+ G+ IK
Sbjct: 138 FGALDAVSKAFGLIVRRINDEPF--DVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKE 195
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
D S A + S + G +R+++++G D A+ I L E Y + P+
Sbjct: 196 IQDASGARLNASEV--MLPGSTERILSVSGVADAIHIAVYYIGTILLE---YQERNPGPH 250
Query: 207 TYAGVFFSGFHGM 219
+ G + GM
Sbjct: 251 SGIGTYRQQPQGM 263
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 41/188 (21%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
++S P + I+F++ N G+VIG+GGS I + Q SGAR L+ S PG+T+RI+
Sbjct: 162 VASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASGAR--LNASEVMLPGSTERIL 219
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQ------------------------------- 114
+SG D I AV I +L E +
Sbjct: 220 SVSGVADAIHIAV-YYIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTGVAPGAG 278
Query: 115 -ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHS-----YYGLN 168
A G++T+ ++ +PNS G+IIGKAG+ I SQ I+++ + +
Sbjct: 279 GASAPGSQTQ-QIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPANPD 337
Query: 169 DRLVTLTG 176
+RLVT+TG
Sbjct: 338 ERLVTITG 345
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 15/81 (18%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT----------DRIIMI 87
+ + N L GA+IGK GS IN+ ++QS +I+++ PGT +R++ I
Sbjct: 289 QIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTE-----PGTAPGPGQPANPDERLVTI 343
Query: 88 SGTIDEILRAVDLVIDKLLTE 108
+G I AV ++ +L E
Sbjct: 344 TGQPVNINIAVQMLYHRLEAE 364
>gi|126345445|ref|XP_001362564.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Monodelphis
domestica]
Length = 338
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 322
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 323 GSAASISLAQYLI 335
>gi|401880798|gb|EJT45110.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 2479]
Length = 793
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 11/193 (5%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S+P + +R L+ A +IG+ G+ +N+ + +SGAR+ +S S PG +RI+ +
Sbjct: 81 SEPPAQQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISES---IPGNPERILNV 137
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKS 146
G +D + +A L++ ++ E D A G++ ++ I+PNS GS+IG+ G+ IK
Sbjct: 138 FGALDAVSKAFGLIVRRINDEPF--DVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKE 195
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
D S A + S + G +R+++++G D A+ I L E Y + P+
Sbjct: 196 IQDASGARLNASEV--MLPGSTERILSVSGVADAIHIAVYYIGTILLE---YQERNPGPH 250
Query: 207 TYAGVFFSGFHGM 219
+ G + GM
Sbjct: 251 SGIGTYRQQPQGM 263
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 41/188 (21%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
++S P + I+F++ N G+VIG+GGS I + Q SGAR L+ S PG+T+RI+
Sbjct: 162 VASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASGAR--LNASEVMLPGSTERIL 219
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQ------------------------------- 114
+SG D I AV I +L E +
Sbjct: 220 SVSGVADAIHIAV-YYIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTGVAPGAG 278
Query: 115 -ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHS-----YYGLN 168
A G++T+ ++ +PNS G+IIGKAG+ I SQ I+++ + +
Sbjct: 279 GASAPGSQTQ-QIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPVNPD 337
Query: 169 DRLVTLTG 176
+RLVT+TG
Sbjct: 338 ERLVTITG 345
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 15/81 (18%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT----------DRIIMI 87
+ + N L GA+IGK GS IN+ ++QS +I+++ PGT +R++ I
Sbjct: 289 QIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTE-----PGTAPGPGQPVNPDERLVTI 343
Query: 88 SGTIDEILRAVDLVIDKLLTE 108
+G I AV ++ +L E
Sbjct: 344 TGQPVNINIAVQMLYHRLEAE 364
>gi|354490197|ref|XP_003507246.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cricetulus
griseus]
Length = 322
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 26/206 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSGFHGMPYG-----AVPPP 227
+ + V F+G G Y A+P P
Sbjct: 187 SSSPVIFAG--GQAYTIQGQYAIPQP 210
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 93/232 (40%), Gaps = 67/232 (28%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q++ + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKL-------------------------------------- 105
I+G +I E ++ + +V+ +
Sbjct: 148 IAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAI 207
Query: 106 ----LTELH--AEDQA---------------DDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
LT+LH A Q+ D T L +PN G IIG+ GA I
Sbjct: 208 PQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 267
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
S A IK + + G DR VT+TG+ A LI ++LS +T
Sbjct: 268 NEIRQMSGAQIKTA---NPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 316
>gi|410897345|ref|XP_003962159.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 321
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDTIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT + ++ ++ I + + E + T+PY
Sbjct: 133 VQVAGDMLPNS----TERAVTISGTPEAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 186
Query: 209 AGVFFSG 215
V FSG
Sbjct: 187 TPVIFSG 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 86 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV--AGDMLPNS 143
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT + I++ V + +L
Sbjct: 144 TERAVTISGTPEAIIQCVKQICVVML 169
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 247 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME---GSSERQITITGTPANISLA 303
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 304 QYLINARLTSEV 315
>gi|213511793|ref|NP_001133381.1| poly(rC)-binding protein 2 [Salmo salar]
gi|209152662|gb|ACI33123.1| PolyrC-binding protein 2 [Salmo salar]
Length = 327
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 22/233 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKVLLPWPLNP 261
+ V F+G G Y P +++A P + + Q P+P+ P
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDSSSASISPQL-TKLHQLAMQQSPFPMGP 234
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+GT I+ V + +L
Sbjct: 148 IAGTPQSIIECVKQICVVML 167
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + + + N L G +IG+ GS IN+ + SGA+I+++ E G+ DR + I+
Sbjct: 244 DASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANPVE---GSADRQVTIT 300
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 301 GSAASISLAEYLINARLSSE 320
>gi|336265613|ref|XP_003347577.1| hypothetical protein SMAC_04885 [Sordaria macrospora k-hell]
gi|380096444|emb|CCC06492.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 469
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
Query: 15 HGKRSTA--PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
HG RS A PV + D T ++R ++S+P A +IGKGG ++ + S A+ +S
Sbjct: 104 HGPRSRAQPPVSAQPHDETAW-IHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVS- 161
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNS 131
++ G +RI+ +SG +D + +A L+I L E AE + +KT LRL++P+
Sbjct: 162 --DYQKGAVERILTVSGVVDAVAKAFGLIIRTLNNEPLAE--PSNTHSKTYPLRLLIPHV 217
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKIS 158
GSIIGK GA IK + S A + S
Sbjct: 218 LIGSIIGKGGARIKEIQEASGARLNAS 244
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 189 IRTLNNEPLAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGARLNASDS-- 246
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 247 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 281
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTG 176
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TG
Sbjct: 383 AGAALTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITG 438
Query: 177 TLDEQMRALELILLKLSE 194
T + AL L+ +L E
Sbjct: 439 TEECNRMALYLLYQRLGE 456
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +E R
Sbjct: 390 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGT-EECNRM 445
Query: 98 VDLVIDKLLTELH 110
++ + L EL
Sbjct: 446 ALYLLYQRLGELQ 458
>gi|354490195|ref|XP_003507245.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cricetulus
griseus]
Length = 349
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+ + E G+TDR + I+
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVE---GSTDRQVTIT 322
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 323 GSAASISLAQYLINVRLSSE 342
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IK + + G DR VT+T
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTA---NPVEGSTDRQVTIT 322
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 323 GSAASISLAQYLINVRLSSET 343
>gi|432931639|ref|XP_004081713.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Oryzias
latipes]
Length = 343
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDTIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT + ++ ++ I + + E + T+PY
Sbjct: 133 VQVAGDMLPNS----TERAVTISGTPEAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 186
Query: 209 AGVFFSG 215
V FSG
Sbjct: 187 TPVIFSG 193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 86 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV--AGDMLPNS 143
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT + I++ V + +L
Sbjct: 144 TERAVTISGTPEAIIQCVKQICVVML 169
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 269 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME---GSSERQITITGTPANISLA 325
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 326 QYLINARLTSEV 337
>gi|410900025|ref|XP_003963497.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 318
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 26/218 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTSIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ +K +RL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCKIKEIRESAGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP 241
+ V F+G G Y A+P P H A P
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 92/227 (40%), Gaps = 63/227 (27%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P IR +V G++IGKGG I + + +GA++Q++ + P +T+R I
Sbjct: 90 STATSKPPVTIRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQVA--GDMLPNSTERAIT 147
Query: 87 ISGT---IDEILRAVDLVIDKL-------------------------------------- 105
I+GT I E ++ + +V+ +
Sbjct: 148 IAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPD 207
Query: 106 LTELHA------------EDQADDVGTKTKLR-----LIVPNSSCGSIIGKAGATIKSFM 148
LT+LH +Q G + L +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSPFPIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIR 267
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ + G DR VT+TG+ A LI +LS +
Sbjct: 268 QMSGAQIKIA---NPVEGSTDRQVTITGSHASISLAEYLINARLSSE 311
>gi|308321889|gb|ADO28082.1| poly(rc)-binding protein 2 [Ictalurus furcatus]
Length = 318
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPLSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP 241
+ V F+G G Y A+P P H A P
Sbjct: 185 SPVTFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 97/229 (42%), Gaps = 63/229 (27%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGG I + + +GA++Q++ + P +T+R
Sbjct: 88 SNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERA 145
Query: 85 IMISGT---IDEILRAVDLVIDKL------------------------------------ 105
I I+GT I E ++ + +V+ +
Sbjct: 146 ITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVTFAGGQAYAVQGQHAIPQ 205
Query: 106 --LTELH--AEDQAD--------------DVGTKT-KLRLIVPNSSCGSIIGKAGATIKS 146
LT+LH A Q+ D T+T L +PN G IIG+ GA I
Sbjct: 206 PDLTKLHQLAMQQSPFPLAPSSQGFTAGMDATTQTGSHELTIPNDLIGCIIGRQGAKINE 265
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ + G NDR VT+TG+ A LI +LS +
Sbjct: 266 IRQMSGAQIKIA---NPVEGSNDRQVTITGSPASISLAEYLINARLSSE 311
>gi|77736367|ref|NP_001029883.1| poly(rC)-binding protein 2 [Bos taurus]
gi|157057549|ref|NP_035172.2| poly(rC)-binding protein 2 isoform 2 [Mus musculus]
gi|291389257|ref|XP_002711065.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
gi|348581077|ref|XP_003476304.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cavia porcellus]
gi|426224370|ref|XP_004006344.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Ovis aries]
gi|74268197|gb|AAI03398.1| Poly(rC) binding protein 2 [Bos taurus]
gi|119617114|gb|EAW96708.1| poly(rC) binding protein 2, isoform CRA_c [Homo sapiens]
gi|148672028|gb|EDL03975.1| poly(rC) binding protein 2, isoform CRA_b [Mus musculus]
gi|149031923|gb|EDL86835.1| rCG50739, isoform CRA_d [Rattus norvegicus]
gi|296487920|tpg|DAA30033.1| TPA: poly(rC) binding protein 2 [Bos taurus]
Length = 349
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 322
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 323 GSAASISLAQYLINVRLSSE 342
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 322
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 323 GSAASISLAQYLINVRLSSET 343
>gi|426218397|ref|XP_004003433.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Ovis aries]
Length = 319
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 15/185 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAG-- 210
++++ L +S +R VT++GT D ++ ++ I + + E T+ V A
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESPRKGVTVVVAPKPASTP 186
Query: 211 VFFSG 215
V F+G
Sbjct: 187 VIFAG 191
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 245 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 301
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 302 QYLINARLTSEV 313
>gi|328709627|ref|XP_003244018.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Acyrthosiphon
pisum]
Length = 525
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 21/188 (11%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D + +R ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 5 SKDDSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIVT 59
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSIIGKA 140
ISG+ + I +A L+ K+ E E Q G LRLIVP S CGS+IGK
Sbjct: 60 ISGSTEAIYKAFSLICTKV--EEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKG 117
Query: 141 GATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY 198
G IK + + A I+++ L S +R VTLTGT D + + I + E
Sbjct: 118 GNKIKEIREATGAQIQVASDVLPQS----TERAVTLTGTRDSITQCIFHICAVMVESP-- 171
Query: 199 SQTMTVPY 206
+ +T+PY
Sbjct: 172 PKGVTIPY 179
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF-FPGTTDRIIMISGTIDEILRAVD 99
V N L G +IGKGG+ I + + SGA I++S + +TDR I I+G D + A
Sbjct: 320 VPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITITGNPDSVALAQY 379
Query: 100 LV 101
L+
Sbjct: 380 LI 381
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGT 177
G + + VPN G IIGK G I S A+I+IS D DR +T+TG
Sbjct: 311 GGQQTHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITITGN 370
Query: 178 LDEQMRALELILLKL 192
D A LI + L
Sbjct: 371 PDSVALAQYLINMSL 385
>gi|392884376|gb|AFM91020.1| poly(rC) binding protein 3, isoform CRAb [Callorhinchus milii]
Length = 349
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K +++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D ++ ++ I + + E + T+PY
Sbjct: 131 VQVAGDMLPNS----TERAVTISGMPDAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 184
Query: 209 AGVFFSG 215
A V F+G
Sbjct: 185 APVIFAG 191
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 25 SLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
S+++ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+
Sbjct: 86 SMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTE 143
Query: 83 RIIMISGTIDEILRAVDLVIDKLL 106
R + ISG D I++ V + +L
Sbjct: 144 RAVTISGMPDAIIQCVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+T+R I I+G+ I A
Sbjct: 275 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSTERQITITGSPANISLA 331
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 332 QYLINARLTSEV 343
>gi|164655395|ref|XP_001728827.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
gi|159102713|gb|EDP41613.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
Length = 382
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSS--DPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
+E + S Y +P + G +T+ +S SS T P +R L+ A +IGK G IN
Sbjct: 49 VEQSPSLYASAPALSGVTNTSTTQSPSSYTPSTPGPIVMRALIITSDASVIIGKQGRHIN 108
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV 118
+ + S AR+ +S E P +RI+ +SG +D + +A L++ ++ E DQ
Sbjct: 109 EIRELSNARLNIS---ESIPSNPERILTVSGALDAVSKAFGLLVRRINDEPF--DQPSLP 163
Query: 119 GTK-TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
G++ +R I+PNS G+IIG+ G+ IK + S A ++ + G +R++++TG
Sbjct: 164 GSRAASIRFIIPNSRMGAIIGRQGSKIKEIQEASGA--RLHAGETMLPGSTERILSITGV 221
Query: 178 LD 179
D
Sbjct: 222 AD 223
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 56/228 (24%)
Query: 23 VKSLSSDPTEKPTY-------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
V+ ++ +P ++P+ IRF++ N GA+IG+ GS I + Q SGAR+ +
Sbjct: 149 VRRINDEPFDQPSLPGSRAASIRFIIPNSRMGAIIGRQGSKIKEIQEASGARLHAGET-- 206
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLV---------------------IDKLLT------- 107
PG+T+RI+ I+G D + AV V +++ LT
Sbjct: 207 MLPGSTERILSITGVADALHIAVYYVGATLLEHPDRGSNNLPYRPAAVNRALTPSLVGSP 266
Query: 108 ---------ELHAEDQADDV------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
L A + + G +T+ ++ +PN G IIGK G I S
Sbjct: 267 LNSPSASMLALSATNSPKALASVLTPGLQTQ-QIFIPNDLVGCIIGKGGQKINEIRQLSA 325
Query: 153 AVIKISRLDHSYYG---LNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
+ IKI + ++RLVT+TG A+ L+ +L ++ +
Sbjct: 326 SHIKIMERNAGIAAGGSGSERLVTITGPPPNIQMAVTLLYQRLEQEKM 373
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
PS + +T K+L+S T + + N L G +IGKGG IN+ + S + I+
Sbjct: 270 PSASMLALSATNSPKALASVLTPGLQTQQIFIPNDLVGCIIGKGGQKINEIRQLSASHIK 329
Query: 70 -LSRSHEFFPG--TTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ R+ G ++R++ I+G I AV L+ +L E
Sbjct: 330 IMERNAGIAAGGSGSERLVTITGPPPNIQMAVTLLYQRLEQE 371
>gi|344266063|ref|XP_003405100.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Loxodonta
africana]
Length = 360
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 91/164 (55%), Gaps = 16/164 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLS 193
++++ L +S +R +T+ G ++ E ++ + +++L++S
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLEVS 170
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G ++K ++S A I IS + +R++TL G + +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 184 ALELILLKLSEDTLYSQT 201
A +I+ KL ED S T
Sbjct: 71 AFAMIIDKLEEDISSSMT 88
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 333
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 334 GSAASISLAQYLINVRLSSE 353
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 333
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 334 GSAASISLAQYLINVRLSSET 354
>gi|363747265|ref|XP_003643961.1| PREDICTED: poly(rC)-binding protein 2-like isoform 3 [Gallus
gallus]
Length = 320
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 304
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 305 GSAASISLAQYLI 317
>gi|334350022|ref|XP_003342305.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
Length = 320
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 304
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 305 GSAASISLAQYLI 317
>gi|363747267|ref|XP_423701.3| PREDICTED: poly(rC)-binding protein 2-like isoform 4 [Gallus
gallus]
Length = 307
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 26/204 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSGFHGMPYG-----AVPPP 227
+ V F+G G Y A+P P
Sbjct: 185 SPVIFAG--GQAYTIQGQYAIPQP 206
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 80/209 (38%), Gaps = 63/209 (30%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+G I+ V + +
Sbjct: 148 IAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPD 207
Query: 106 LTELH--AEDQA---------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
LT+LH A Q+ D T L +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSHFPMSHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 267
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
S A IKI+ + G DR VT+TG+
Sbjct: 268 QMSGAQIKIA---NPVEGSTDRQVTITGS 293
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 235 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 291
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 292 GSAASISLAQYLI 304
>gi|242020720|ref|XP_002430800.1| predicted protein [Pediculus humanus corporis]
gi|212515997|gb|EEB18062.1| predicted protein [Pediculus humanus corporis]
Length = 515
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ G+TI Q+ AR+ + R G+ ++ I I G D
Sbjct: 116 LRILVQSDMVGAIIGRQGTTIRQITQQTRARVDVHRKDNV--GSLEKAITIYGNPDNCTN 173
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A K+L + AE + G + L+++ N+ G IIGK G TIK M D+ + I
Sbjct: 174 ACK----KILEVMQAEASNTNKG-EISLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKIT 228
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ GT+D RA I KL + P T + F G
Sbjct: 229 VSSINDINSFNL-ERIITVKGTIDNMSRAESEISAKLRQSYENDLQAMAPQT---MMFPG 284
Query: 216 FHGM 219
H M
Sbjct: 285 LHPM 288
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
+++ +S+ + ++ L N L G +IGKGG+TI + ++I +S ++ +
Sbjct: 182 MQAEASNTNKGEISLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITVSSINDINSFNLE 241
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTELHAEDQA 115
RII + GTID + RA + KL + QA
Sbjct: 242 RIITVKGTIDNMSRAESEISAKLRQSYENDLQA 274
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN---DRLVTLTGTLDEQM 182
L +PNS+ G+IIG G I++ + S A +KI+ L+ G +R VT+ GT + Q
Sbjct: 342 LFIPNSAVGAIIGTKGTHIRNIIRFSGASVKIASLEQE-KGTEPPAERKVTIVGTPESQW 400
Query: 183 RALELILLKLSED 195
+A LI K+ E+
Sbjct: 401 KAQYLIFEKMREE 413
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT---TDRIIMISGTIDEIL 95
+ N GA+IG G+ I + SGA ++++ S E GT +R + I GT +
Sbjct: 342 LFIPNSAVGAIIGTKGTHIRNIIRFSGASVKIA-SLEQEKGTEPPAERKVTIVGTPESQW 400
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+ +K+ E DDV K + ++V G IIGK G ++ + ++I
Sbjct: 401 KAQYLIFEKMREEGFIGSGNDDV--KLTVEILV-----GRIIGKGGQNVRELQHATGSII 453
Query: 156 KI 157
K+
Sbjct: 454 KL 455
>gi|432866565|ref|XP_004070866.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 318
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 26/218 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTSIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ +K +RL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISNSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITVAGTPQSIIECVKQICIVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP 241
+ V F+G G Y A+P P H A P
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 63/227 (27%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q++ + P +T+R I
Sbjct: 90 STATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQVA--GDMLPNSTERAIT 147
Query: 87 ISGT---IDEILRAVDLVIDKL-------------------------------------- 105
++GT I E ++ + +V+ +
Sbjct: 148 VAGTPQSIIECVKQICIVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPD 207
Query: 106 LTELHA------------EDQADDVGTKTKLR-----LIVPNSSCGSIIGKAGATIKSFM 148
LT+LH +Q G + L +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSPFPIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIR 267
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ + G DR VT+TG+ A LI +LS +
Sbjct: 268 QMSGAQIKIA---NPVEGSTDRQVTITGSHASISLAEYLINARLSSE 311
>gi|336379931|gb|EGO21085.1| hypothetical protein SERLADRAFT_398361 [Serpula lacrymans var.
lacrymans S7.9]
Length = 304
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 84/149 (56%), Gaps = 16/149 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+ A +IGKGGS +N+ + +SGAR+ +S E PG +RI+ +SG +D +
Sbjct: 3 HMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVS---ESIPGNPERILNVSGPLDAVS 59
Query: 96 RAVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+A L++ ++ D+ DV G++ ++ ++PNS GS+IGK G+ IK D
Sbjct: 60 KAFGLIVRRI------NDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDA 113
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
S A + S + G +R++++ G D
Sbjct: 114 SGARLNAS--EGMLPGSTERVLSVAGVAD 140
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 86/217 (39%), Gaps = 52/217 (23%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S P + I+F++ N G+VIGK GS I + Q SGAR L+ S PG+T+R++ +
Sbjct: 78 SVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGAR--LNASEGMLPGSTERVLSV 135
Query: 88 SGTIDEILRAVDLVIDKLLTELHAE----------------DQADDVGTK---------- 121
+G D I A I +L E +A G+
Sbjct: 136 AGVADAIHIAT-YYIGNILIEAQERMPSSSHSSYRPSSNPSRRAPYQGSSYVPGYSQPFG 194
Query: 122 -------------TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
++ +PN G IIGK G+ I S + IKI G+N
Sbjct: 195 SGPPPPHNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVGVGMN 254
Query: 169 ----------DRLVTLTGTLDEQMRALELILLKLSED 195
+RLV +TG A++L+ +L ++
Sbjct: 255 GAPAPTGGEGERLVVITGQPANIQMAVQLLYHRLEQE 291
>gi|1360003|emb|CAA66619.1| nuclear poly(C)-binding protein, splicevariant E [Mus musculus]
Length = 349
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +I + G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 322
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 323 GSAASISLAQYLINVRLSSE 342
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G II + GA I S A IKI+ + G DR VT+T
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 322
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 323 GSAASISLAQYLINVRLSSET 343
>gi|409045569|gb|EKM55049.1| hypothetical protein PHACADRAFT_95060 [Phanerochaete carnosa
HHB-10118-sp]
Length = 409
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 83/145 (57%), Gaps = 8/145 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+ A +IGK G+ +N+ + +SGAR+ +S E PG +RI+ +SG +D +
Sbjct: 111 HMRCLIVTQDASIIIGKAGTHVNEIREKSGARVMVS---ESIPGNPERILNVSGPLDAVS 167
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L++ ++ E D+ G++ ++ ++PNS GS+IGK GA IK D S A
Sbjct: 168 KAFGLIVRRINDEPF--DKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGAR 225
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLD 179
+ S + G +R+++++G D
Sbjct: 226 LNAS--EGMLPGSTERVLSVSGVAD 248
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 98/229 (42%), Gaps = 59/229 (25%)
Query: 23 VKSLSSDPTEKPTY-------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
V+ ++ +P +KP+ I+F++ N G+VIGKGG+ I + Q SGAR L+ S
Sbjct: 174 VRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGAR--LNASEG 231
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL-------------------------- 109
PG+T+R++ +SG D I A I +L E
Sbjct: 232 MLPGSTERVLSVSGVADAIHIAT-YYIGNILIEANERMPSYQNSSYRPSSTSRSRAPYQG 290
Query: 110 -------HA----EDQADDVGTKTKLRLI-VPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
HA + A G + + + I +PN G IIGK G+ I S + IKI
Sbjct: 291 SSYVPIGHASALLQPHAPPPGAQLQTQQIYIPNDLVGCIIGKGGSKINEIRHVSASQIKI 350
Query: 158 SRLDHSYYGLN-----------DRLVTLTGTLDEQMRALELILLKLSED 195
G+N +RLV +TG + A++L+ +L ++
Sbjct: 351 MEPGAVGVGMNGQPAPAAAHEGERLVVITGAPNNIQIAVQLLYSRLEQE 399
>gi|327263852|ref|XP_003216731.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Anolis
carolinensis]
Length = 360
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 333
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 334 GSAASISLAQYLINVRLSSE 353
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 333
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 334 GSAASISLAQYLINVRLSSET 354
>gi|387017714|gb|AFJ50975.1| Poly(rC)-binding protein 2-like [Crotalus adamanteus]
Length = 347
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 264 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 320
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 321 GSAASISLAQYLINVRLSSE 340
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 264 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 320
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 321 GSAASISLAQYLINVRLSSET 341
>gi|405122865|gb|AFR97631.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 357
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 89/166 (53%), Gaps = 16/166 (9%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S+ P DP + +R L+ A +IG+GG+ +N+ + +S AR+ +S E P
Sbjct: 64 SSEPTAPAKPDPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVS---ESIP 120
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSC 133
G +RI+ +SG +D + +A L++ ++ D+ DV G++ ++ I+PNS
Sbjct: 121 GNPERILNVSGPLDAVAKAFGLIVRRI------NDEPFDVPSVPGSRAVTIKFIIPNSRM 174
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
GS+IGK G+ IK + S A + S + G +R+++++G D
Sbjct: 175 GSVIGKGGSKIKEIQEASGARLNAS--EAMLPGSTERVLSVSGVAD 218
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 28/191 (14%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + I+F++ N G+VIGKGGS I + Q SGAR L+ S PG+T+R++ +SG
Sbjct: 158 PGSRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGAR--LNASEAMLPGSTERVLSVSG 215
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK--------------------LRLIVP 129
D + AV I +L E A+ G+ + ++ +P
Sbjct: 216 VADAVHIAV-YYIGTILLEYQDRYPANATGSYKQSQSRGPPANSNAPPPPGMQTQQIFIP 274
Query: 130 NSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG-----LNDRLVTLTGTLDEQMRA 184
N+ G+IIG+ G+ I S I+++ + G +RLVT+TG D A
Sbjct: 275 NALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDNINAA 334
Query: 185 LELILLKLSED 195
+ L+ ++ +
Sbjct: 335 VALLYSRVEAE 345
>gi|336367212|gb|EGN95557.1| hypothetical protein SERLA73DRAFT_186638 [Serpula lacrymans var.
lacrymans S7.3]
Length = 370
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 84/149 (56%), Gaps = 16/149 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+ A +IGKGGS +N+ + +SGAR+ +S E PG +RI+ +SG +D +
Sbjct: 69 HMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVS---ESIPGNPERILNVSGPLDAVS 125
Query: 96 RAVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+A L++ ++ D+ DV G++ ++ ++PNS GS+IGK G+ IK D
Sbjct: 126 KAFGLIVRRI------NDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDA 179
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
S A + S + G +R++++ G D
Sbjct: 180 SGARLNAS--EGMLPGSTERVLSVAGVAD 206
>gi|54037961|gb|AAH84195.1| Pcbp2 protein [Xenopus laevis]
Length = 353
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G NDR VT+T
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSNDRQVTIT 326
Query: 176 GTLDEQMRALELILLKLSED 195
G+ A LI ++LS +
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+ DR + I+
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSNDRQVTIT 326
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
>gi|343427422|emb|CBQ70949.1| related to PBP2-PAB1 binding protein [Sporisorium reilianum SRZ2]
Length = 416
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ A +IGK G IN+ + +S AR+ +S E PG +RI+ +SG +D + +
Sbjct: 115 MRTLIVTSDASIIIGKSGKHINEIRDKSNARLNIS---EIIPGNPERILTVSGPLDAVSK 171
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L++ ++ E DQ G+K+ +R IVPNS GS+IGK G+ IK + S A
Sbjct: 172 AFGLIVRRINDEPF--DQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGA-- 227
Query: 156 KISRLDHSYYGLNDRLVTLTGTLD 179
+++ + G +R+++++G D
Sbjct: 228 RLTAGEAMLPGSTERVLSISGVAD 251
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 60/223 (26%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P K IRF+V N G+VIGK GS I + Q SGAR L+ PG+T+R++ ISG
Sbjct: 191 PGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGAR--LTAGEAMLPGSTERVLSISG 248
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDV------------------------------- 118
D + AV V LL H + A+++
Sbjct: 249 VADAVHIAVYYVGTILLE--HQDRNANNLPYRPTAGGPSTRPPAPGANPYAAPQQPFGYG 306
Query: 119 ---------------------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
G++T+ ++ +PN G IIGK G+ I S + IKI
Sbjct: 307 APAPPFGGAPAGAGGAPQLPPGSQTQ-QIFIPNDLVGCIIGKGGSKINEIRSMSASHIKI 365
Query: 158 ---SRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
+ N+RLVT+TG A+ L+ +L ++ +
Sbjct: 366 MEPGAGIAAGGSGNERLVTITGPPPNIQMAVSLLYQRLEQEKM 408
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D ++ T+ +R ++ S IIGK+G I D S A + IS + G +R++
Sbjct: 104 DSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEI---IPGNPERIL 160
Query: 173 TLTGTLDEQMRALELILLKLSED 195
T++G LD +A LI+ +++++
Sbjct: 161 TVSGPLDAVSKAFGLIVRRINDE 183
>gi|410900550|ref|XP_003963759.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 434
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +SGARI +S + +RI+ I+G + I R
Sbjct: 19 LRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG-----SSPERIVTITGATEAIFR 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ A V +K LRL+ P S CGS+IGK G+ IK + + A
Sbjct: 74 AFAMIAQKFEEDISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGT 177
++++ L S +R VT++GT
Sbjct: 134 VQVAGDMLPDS----TERAVTISGT 154
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL++ GSIIGK G T+K ++S A I IS +R+VT+TG + R
Sbjct: 19 LRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSP-----ERIVTITGATEAIFR 73
Query: 184 ALELILLKLSED 195
A +I K ED
Sbjct: 74 AFAMIAQKFEED 85
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S SS ++ P +R + G++IGKGGS I + + +GA++Q++ + P +T+R
Sbjct: 91 SNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVA--GDMLPDSTERA 148
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT I + V + +L
Sbjct: 149 VTISGTPQAITQCVRHICSVML 170
>gi|148833484|ref|NP_001092090.1| poly(rC)-binding protein 2 isoform c [Homo sapiens]
gi|157042772|ref|NP_001096636.1| poly(rC)-binding protein 2 isoform 3 [Mus musculus]
gi|73996241|ref|XP_857995.1| PREDICTED: poly(rC)-binding protein 2 isoform 20 [Canis lupus
familiaris]
gi|149714839|ref|XP_001504575.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Equus caballus]
gi|291389259|ref|XP_002711066.1| PREDICTED: poly(rC) binding protein 2-like isoform 3 [Oryctolagus
cuniculus]
gi|332206041|ref|XP_003252098.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Nomascus
leucogenys]
gi|348581075|ref|XP_003476303.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cavia porcellus]
gi|410964551|ref|XP_003988817.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Felis catus]
gi|426224372|ref|XP_004006345.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Ovis aries]
gi|426372755|ref|XP_004053283.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Gorilla gorilla
gorilla]
gi|51491472|dbj|BAD36897.1| poly(rC) binding protein 2 [Homo sapiens]
gi|119617112|gb|EAW96706.1| poly(rC) binding protein 2, isoform CRA_a [Homo sapiens]
gi|148672027|gb|EDL03974.1| poly(rC) binding protein 2, isoform CRA_a [Mus musculus]
gi|149031921|gb|EDL86833.1| rCG50739, isoform CRA_b [Rattus norvegicus]
Length = 331
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 304
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 305 GSAASISLAQYLINVRLSSE 324
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 304
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 305 GSAASISLAQYLINVRLSSET 325
>gi|147901405|ref|NP_001084264.1| poly(rC) binding protein 2 [Xenopus laevis]
gi|5459450|emb|CAB50743.1| hnRNP-E2 protein [Xenopus laevis]
Length = 353
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G NDR VT+T
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSNDRQVTIT 326
Query: 176 GTLDEQMRALELILLKLSED 195
G+ A LI ++LS +
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+ DR + I+
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSNDRQVTIT 326
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
>gi|495128|emb|CAA53546.1| mCBP [Mus musculus]
Length = 331
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +I + G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 304
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 305 GSAASISLAQYLINVRLSSE 324
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G II + GA I S A IKI+ + G DR VT+T
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 304
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 305 GSAASISLAQYLINVRLSSET 325
>gi|408389667|gb|EKJ69103.1| hypothetical protein FPSE_10721 [Fusarium pseudograminearum CS3096]
Length = 474
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+P A VIGKGG +++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 114 HVRAVISSPEAATVIGKGGENVSNIRKLSNAKCTVS---DYQKGAVERILTVSGIVDAVA 170
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E +++ +KT LRL++P+ GSIIGK GA I+ D S A
Sbjct: 171 KAFGLIIRTLNNE--PLNESSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQDASGAR 228
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 229 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNDRFGGPAASAYA 281
Query: 215 GFHGMPYGAVP---PPVPAVPHNTAAHYG 240
G P G++P VP P ++ HYG
Sbjct: 282 TRSGAPAGSIPGGMQVVPYSPQPSSGHYG 310
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
SS + K +R L+ + L G++IGKGG+ I + Q SGAR+ S S P +++R ++
Sbjct: 188 SSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQDASGARLNASDS--CLPMSSERSLV 245
Query: 87 ISGTIDEILRAVDLVIDKLLTELH 110
+ G D + A V LL +L+
Sbjct: 246 VMGVADAVHIATYYVGSTLLEQLN 269
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 400 QIYIPNDMVGAIIGKGGQKINEIRQMSNSVIKINEPQDNS----NERLVTITGTEECNRM 455
Query: 184 ALELILLKLSE 194
AL ++ +L E
Sbjct: 456 ALYMLYSRLGE 466
>gi|58259741|ref|XP_567283.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134116752|ref|XP_773048.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255668|gb|EAL18401.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229333|gb|AAW45766.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 357
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 89/166 (53%), Gaps = 16/166 (9%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S+ P DP + +R L+ A +IG+GG+ +N+ + +S AR+ +S E P
Sbjct: 64 SSEPTAPAKPDPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVS---ESIP 120
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSC 133
G +RI+ +SG +D + +A L++ ++ D+ DV G++ ++ I+PNS
Sbjct: 121 GNPERILNVSGPLDAVAKAFGLIVRRI------NDEPFDVPSVPGSRAVTIKFIIPNSRM 174
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
GS+IGK G+ IK + S A + S + G +R+++++G D
Sbjct: 175 GSVIGKGGSKIKEIQEASGARLNAS--EAMLPGSTERVLSVSGVAD 218
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 28/191 (14%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + I+F++ N G+VIGKGGS I + Q SGAR L+ S PG+T+R++ +SG
Sbjct: 158 PGSRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGAR--LNASEAMLPGSTERVLSVSG 215
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK--------------------LRLIVP 129
D + AV I +L E ++ G+ + ++ +P
Sbjct: 216 VADAVHIAV-YYIGTILLEYQDRYPSNATGSYKQSQSRGPPPNSNAPPPPGMQTQQIFIP 274
Query: 130 NSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG-----LNDRLVTLTGTLDEQMRA 184
N+ G+IIG+ G+ I S I+++ + G +RLVT+TG D A
Sbjct: 275 NALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDNINAA 334
Query: 185 LELILLKLSED 195
+ L+ ++ +
Sbjct: 335 VALLYSRVEAE 345
>gi|432931637|ref|XP_004081712.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Oryzias
latipes]
Length = 321
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDTIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT + ++ ++ I + + E + T+PY
Sbjct: 133 VQVAGDMLPNS----TERAVTISGTPEAIIQCVKQICVVMLESP--PKGATIPYRPKPAS 186
Query: 209 AGVFFSG 215
V FSG
Sbjct: 187 TPVIFSG 193
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 86 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV--AGDMLPNS 143
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT + I++ V + +L
Sbjct: 144 TERAVTISGTPEAIIQCVKQICVVML 169
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 247 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME---GSSERQITITGTPANISLA 303
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 304 QYLINARLTSEV 315
>gi|334350025|ref|XP_003342306.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
gi|444513888|gb|ELV10473.1| Poly(rC)-binding protein 2 [Tupaia chinensis]
Length = 307
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 80/209 (38%), Gaps = 63/209 (30%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+G I+ V + +
Sbjct: 148 IAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPD 207
Query: 106 LTELH--AEDQA---------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
LT+LH A Q+ D T L +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 267
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
S A IKI+ + G DR VT+TG+
Sbjct: 268 QMSGAQIKIA---NPVEGSTDRQVTITGS 293
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 235 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 291
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 292 GSAASISLAQYLI 304
>gi|356525090|ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 12/214 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L + G VIGKGGSTI + SGA I++ S F D ++I T +
Sbjct: 309 IRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANF----DECLIIITTTESPSD 364
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+ ++ +L + DD T +RL+VP+ G IIGK+G+ I ++A ++
Sbjct: 365 LKSMAVEAVLLMQGKINDEDD--TTVSIRLLVPSKVIGCIIGKSGSIINEIRKRTKADVR 422
Query: 157 ISRLDHSYYG-LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ-TMTVPYTYAGVFFS 214
IS+ D ND LV + G++D AL I+L+L +D L + T P A +
Sbjct: 423 ISKGDKPKCADANDELVEVGGSVDCVRDALIQIILRLRDDVLRERDTGHNPSIGAESLYP 482
Query: 215 GFHGMP----YGAVPPPVPAVPHNTAAHYGPNMG 244
G G+ +VPP + ++ A G +G
Sbjct: 483 GSAGLSLPSMMHSVPPVAAPMVYDHRAESGAGLG 516
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R L + + G+VIGK G IN + ++ A++++ + FPG+ DR+I I + E
Sbjct: 40 RILCPDEVIGSVIGKNGKVINSIRQETRAKVKVV---DPFPGSKDRVITIYCYVKE---K 93
Query: 98 VDLVIDK-------------LLTELHAE---------DQADDVGTKTKLRLIVPNSSCGS 135
D+ ID L ++H D + + +++VP+S +
Sbjct: 94 EDVEIDDEFAGKEPLCAAQDALLKVHVAIANSIAAIGDSEKKRKDRDECQILVPSSQSAN 153
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTGTLDEQMRAL 185
IIGKAGATIK ++A IK++ D HS D V +TG + RAL
Sbjct: 154 IIGKAGATIKKLRSKTRANIKVTAKDAADPTHSCAMEFDNFVVITGESEAVKRAL 208
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P+ + L+ G V+GKGG+ I + + SGA I++S + DRI +ISGT ++
Sbjct: 554 PSTLDMLIPANAVGKVLGKGGANIANIRKISGASIEISDNKS---ARGDRIALISGTPEQ 610
Query: 94 ILRAVDLV 101
A +L+
Sbjct: 611 KRAAENLI 618
>gi|148226696|ref|NP_001080123.1| poly(rC) binding protein 3 [Xenopus laevis]
gi|27370875|gb|AAH41241.1| Pcbp2b protein [Xenopus laevis]
Length = 353
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G NDR VT+T
Sbjct: 270 DASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSNDRQVTIT 326
Query: 176 GTLDEQMRALELILLKLSED 195
G+ A LI ++LS +
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+ DR + I+
Sbjct: 270 DASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSNDRQVTIT 326
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
>gi|53749712|ref|NP_001005451.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
gi|49250542|gb|AAH74565.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89266917|emb|CAJ82240.1| novel protein similar to poly(rC) binding protein 2 [Xenopus
(Silurana) tropicalis]
Length = 353
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + +K LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G NDR VT+T
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSNDRQVTIT 326
Query: 176 GTLDEQMRALELILLKLSED 195
G+ A LI ++LS +
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+ DR + I+
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSNDRQVTIT 326
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 327 GSTASISLAQYLINVRLSSE 346
>gi|354490193|ref|XP_003507244.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cricetulus
griseus]
Length = 331
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+ + E G+TDR + I+
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVE---GSTDRQVTIT 304
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 305 GSAASISLAQYLINVRLSSE 324
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IK + + G DR VT+T
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTA---NPVEGSTDRQVTIT 304
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 305 GSAASISLAQYLINVRLSSET 325
>gi|328709625|ref|XP_001951678.2| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Acyrthosiphon
pisum]
Length = 411
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 94/186 (50%), Gaps = 17/186 (9%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D + +R ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 5 SKDDSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIVT 59
Query: 87 ISGTIDEILRAVDLV---IDKLLTELHAEDQADDVG-TKTKLRLIVPNSSCGSIIGKAGA 142
ISG+ + I +A L+ +++ + + + A +G LRLIVP S CGS+IGK G
Sbjct: 60 ISGSTEAIYKAFSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGN 119
Query: 143 TIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
IK + + A I+++ L S +R VTLTGT D + + I + E +
Sbjct: 120 KIKEIREATGAQIQVASDVLPQS----TERAVTLTGTRDSITQCIFHICAVMVESP--PK 173
Query: 201 TMTVPY 206
+T+PY
Sbjct: 174 GVTIPY 179
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 13/100 (13%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGT 177
G + + VPN G IIGK G I S A+I+IS D DR +T+TG
Sbjct: 311 GGQQTHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITITGN 370
Query: 178 LDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
D A LI +++S +T AG+ G+H
Sbjct: 371 PDSVALAQYLINMRISMET------------AGLALPGYH 398
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF-FPGTTDRIIMISGTIDEILRAVD 99
V N L G +IGKGG+ I + + SGA I++S + +TDR I I+G D + A
Sbjct: 320 VPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITITGNPDSVALAQY 379
Query: 100 LV 101
L+
Sbjct: 380 LI 381
>gi|321258532|ref|XP_003193987.1| telomere length regulating RNA binding protein; Pbp2p [Cryptococcus
gattii WM276]
gi|317460457|gb|ADV22200.1| Telomere length regulating RNA binding protein, putative; Pbp2p
[Cryptococcus gattii WM276]
Length = 357
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 90/165 (54%), Gaps = 19/165 (11%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
TAP K DP + +R L+ A +IG+GG+ +N+ + +S AR+ +S E PG
Sbjct: 68 TAPAKP---DPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVS---ESIPG 121
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSCG 134
+RI+ +SG +D + +A L++ ++ D+ DV G++ ++ I+PNS G
Sbjct: 122 NPERILNVSGPLDAVAKAFGLIVRRI------NDEPFDVPSVPGSRAVTIKFIIPNSRMG 175
Query: 135 SIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
S+IGK G+ IK + S A + S + G +R+++++G D
Sbjct: 176 SVIGKGGSKIKEIQEASGARLNAS--EAMLPGSTERVLSVSGVAD 218
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + I+F++ N G+VIGKGGS I + Q SGAR L+ S PG+T+R++ +SG
Sbjct: 158 PGSRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGAR--LNASEAMLPGSTERVLSVSG 215
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGT--KTKLR------------------LIVP 129
D + AV I +L E A+ G+ +++ R + +P
Sbjct: 216 VADAVHIAV-YYIGTILLEYQDRYPANATGSYRQSQSRGPPPNSNAPPPPGMQTQQIFIP 274
Query: 130 NSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG-----LNDRLVTLTGTLDEQMRA 184
N+ G+IIG+ G+ I S I+++ + G +RLVT+TG D A
Sbjct: 275 NALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDNINAA 334
Query: 185 LELILLKLSED 195
+ L+ ++ +
Sbjct: 335 VALLYSRVEAE 345
>gi|291409711|ref|XP_002721142.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 362
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKHICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG GA I S A+IKI+ ++ G DR VT+T
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGCQGAKINEICQMSGALIKIA---NTVEGSTDRQVTIT 335
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 336 GSAASISLAQYLINVRLSSET 356
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG G+ IN+ SGA I+++ + E G+TDR + I+
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGCQGAKINEICQMSGALIKIANTVE---GSTDRQVTIT 335
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 336 GSAASISLAQYLINVRLSSE 355
>gi|344283688|ref|XP_003413603.1| PREDICTED: poly(rC)-binding protein 1-like [Loxodonta africana]
Length = 438
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 92/166 (55%), Gaps = 16/166 (9%)
Query: 48 AVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLT 107
A +G+ G+++ + +SGARI +S + +RII ++G + I +A ++IDKL
Sbjct: 109 ASLGRKGTSVKRIREESGARINISEGN-----CPERIITLTGPTNAIFKAFAMIIDKLEE 163
Query: 108 ELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHS 163
++++ ++ LRL+VP + CGS+IGK G IK + + A ++++ L +S
Sbjct: 164 DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNS 223
Query: 164 YYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
+R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 224 ----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 265
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 172 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 229
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 230 IAGVPQSVTECVKQICLVMLETLSQ 254
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 102 IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLD 161
ID E+ + D T+T L +PN+ G IIG+ GA I S A IKI+
Sbjct: 342 IDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA--- 398
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ G + R VT+TG+ A LI +LS +
Sbjct: 399 NPVEGSSGRQVTITGSAASISLAQYLINARLSSE 432
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + N L G +IG+ G+ IN+ + SGA+I+++ E G++ R + I+G+ I
Sbjct: 362 TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE---GSSGRQVTITGSAASI 418
Query: 95 LRAVDLVIDKLLTE 108
A L+ +L +E
Sbjct: 419 SLAQYLINARLSSE 432
>gi|348502908|ref|XP_003439009.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 324
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 26/204 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTSIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ +K +RL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISTSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITVAGTPQSIIECVKQICIVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPP 227
+ V F+G G Y A+P P
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQP 206
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
++GT I+ V + +L
Sbjct: 148 VAGTPQSIIECVKQICIVML 167
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+G+ I A
Sbjct: 250 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSHASISLA 306
Query: 98 VDLVIDKLLTE 108
L+ +L +E
Sbjct: 307 EYLINARLSSE 317
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
L +PN G IIG+ GA I S A IKI+ + G DR VT+TG+ A
Sbjct: 250 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTITGSHASISLA 306
Query: 185 LELILLKLSED 195
LI +LS +
Sbjct: 307 EYLINARLSSE 317
>gi|148672030|gb|EDL03977.1| poly(rC) binding protein 2, isoform CRA_d [Mus musculus]
Length = 316
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 89/226 (39%), Gaps = 61/226 (26%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL---------------------------LTELH--AEDQA-- 115
I+G I+ V + + LT+LH A Q+
Sbjct: 148 IAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHF 207
Query: 116 -------------------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
D T L +PN G IIG+ GA I
Sbjct: 208 PMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQM 267
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
S A IKI+ + G DR VT+TG+ A LI ++LS +T
Sbjct: 268 SGAQIKIA---NPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 310
>gi|194306633|ref|NP_001123613.1| poly(rC)-binding protein 3 isoform 2 [Homo sapiens]
gi|119629728|gb|EAX09323.1| poly(rC) binding protein 3, isoform CRA_a [Homo sapiens]
Length = 345
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E +P+
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPH 212
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 60/228 (26%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL----------------LTELH-------------- 110
T+R + ISGT D I++ V + + LT+LH
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQ 233
Query: 111 --------------AEDQADDVGTKTKL---------RLIVPNSSCGSIIGKAGATIKSF 147
+E+ + +G + L L +PN G IIG+ G I
Sbjct: 234 TNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEI 293
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ ++ G ++R +T+TGT A LI +L+ +
Sbjct: 294 RQMSGAQIKIA---NATEGSSERQITITGTPANISLAQYLINARLTSE 338
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 271 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 327
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 328 QYLINARLTSEV 339
>gi|426218395|ref|XP_004003432.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Ovis aries]
Length = 345
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E +P+
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPH 212
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 60/228 (26%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL----------------LTELH-------------- 110
T+R + ISGT D I++ V + + LT+LH
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQ 233
Query: 111 --------------AEDQADDVGTKTKL---------RLIVPNSSCGSIIGKAGATIKSF 147
+E+ + +G + L L +PN G IIG+ G I
Sbjct: 234 TNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEI 293
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S A IKI+ ++ G ++R +T+TGT A LI +L+ +
Sbjct: 294 RQMSGAQIKIA---NATEGSSERQITITGTPANISLAQYLINARLTSE 338
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 271 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 327
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 328 QYLINARLTSEV 339
>gi|149031922|gb|EDL86834.1| rCG50739, isoform CRA_c [Rattus norvegicus]
Length = 317
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 62/227 (27%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL---------------------------LTELH--AEDQA-- 115
I+G I+ V + + LT+LH A Q+
Sbjct: 148 IAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHF 207
Query: 116 --------------------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
D T L +PN G IIG+ GA I
Sbjct: 208 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
S A IKI+ + G DR VT+TG+ A LI ++LS +T
Sbjct: 268 MSGAQIKIA---NPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 311
>gi|41055221|ref|NP_957486.1| poly(rC)-binding protein 2 [Danio rerio]
gi|28279638|gb|AAH45508.1| Poly(rC) binding protein 2 [Danio rerio]
gi|37681899|gb|AAQ97827.1| poly(rC) binding protein 2 [Danio rerio]
gi|42744604|gb|AAH66603.1| Pcbp2 protein [Danio rerio]
Length = 318
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++ + +K LR++VP S CGS+IGK G IK + + A
Sbjct: 71 AFSMIIEKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ GT + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGTPLSIIECVKQICVVMLESP--PKGVTIPYRPKPSG 184
Query: 209 AGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP 241
+ V F+G G Y A+P P H A P
Sbjct: 185 SPVIFAG--GQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
I I+GT I+ V + +L
Sbjct: 146 ITIAGTPLSIIECVKQICVVML 167
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ E G++DR + I+G+ I A
Sbjct: 244 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSSDRQVTITGSPASISLA 300
Query: 98 VDLVIDKLLTE 108
L+ +L +E
Sbjct: 301 EYLINARLSSE 311
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
L +PN G IIG+ GA I S A IKI+ + G +DR VT+TG+ A
Sbjct: 244 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSSDRQVTITGSPASISLA 300
Query: 185 LELILLKLSED 195
LI +LS +
Sbjct: 301 EYLINARLSSE 311
>gi|348507477|ref|XP_003441282.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 434
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 13/145 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +SGARI +S + +RI+ I+G + I R
Sbjct: 19 LRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG-----SSPERIVTITGPTEGIFR 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ A +V +K LRL+ P S CGS+IGK G+ IK + + A
Sbjct: 74 AFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGT 177
++++ L S +R VT++GT
Sbjct: 134 VQVAGDMLPDS----TERAVTISGT 154
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 112 EDQADD--VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
E+ A D + LRL++ GSIIGK G T+K ++S A I IS +
Sbjct: 5 EEMASDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSP-----E 59
Query: 170 RLVTLTGTLDEQMRALELILLKLSEDTLYSQT 201
R+VT+TG + RA +I K ED + T
Sbjct: 60 RIVTITGPTEGIFRAFSMIAQKFEEDITAAMT 91
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R + G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 97 SKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQV--AGDMLPDSTERAVTISGT 154
Query: 91 IDEILRAVDLVIDKLL 106
I + V + +L
Sbjct: 155 PQAITQCVRHICSVML 170
>gi|55742577|ref|NP_998282.1| poly(rC)-binding protein 4 [Danio rerio]
gi|33604078|gb|AAH56323.1| Zgc:65870 [Danio rerio]
gi|41946775|gb|AAH65955.1| Zgc:65870 [Danio rerio]
Length = 442
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +S ARI +S +RII I+G + + R
Sbjct: 7 LRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGS-----CPERIITITGATECVFR 61
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ KL +L A V +K LRL++P S CGS+IGK G+ IK + + A
Sbjct: 62 AFTMITIKLEEDLAALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIREKTGAQ 121
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++G+ D ++ ++LI + E + T+PY
Sbjct: 122 VQVAGDLLPNS----TERGVTISGSQDAIIQCVKLICTVILESP--PKGATIPY 169
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R ++ G++IGKGGS I + + ++GA++Q+ + + P +T+R + ISG+
Sbjct: 85 SKPPVTLRLVIPASQCGSLIGKGGSKIKEIREKTGAQVQV--AGDLLPNSTERGVTISGS 142
Query: 91 IDEILRAVDLVIDKLL 106
D I++ V L+ +L
Sbjct: 143 QDAIIQCVKLICTVIL 158
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI-SRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++PN GSIIG+ G I S A IKI S+LD + +DR VT+TG+
Sbjct: 261 ELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDST----SDRHVTITGSPISINL 316
Query: 184 ALELI--LLKLSEDTLYSQTMTVP 205
A LI L+ ++ T S +M+ P
Sbjct: 317 AQYLITSCLETAKSTAQSSSMSTP 340
>gi|426218399|ref|XP_004003434.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Ovis aries]
Length = 336
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 13/162 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
++++ L +S +R VT++GT D ++ ++ I + + E
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLE 168
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVML 167
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G T+K ++S A I IS + +R+VT+TG D +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 184 ALELILLKLSEDTLYS 199
A +I K ED + S
Sbjct: 71 AFAMIAYKFEEDIINS 86
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 262 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 318
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 319 QYLINARLTSEV 330
>gi|195042483|ref|XP_001991440.1| GH12054 [Drosophila grimshawi]
gi|193901198|gb|EDW00065.1| GH12054 [Drosophila grimshawi]
Length = 611
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G D
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPDNCTN 144
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 145 ACKRILEVMQQEALSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 199
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + Y L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 200 VSSINDINSYNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAIAPQS---LMFPG 255
Query: 216 FHGMPYGAVP 225
H M + P
Sbjct: 256 LHPMAMMSTP 265
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ L D +R VT+ GT + Q +
Sbjct: 307 LYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 366
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A +I K+ E+ T V T
Sbjct: 367 AQYMIFEKMREEGFMCGTDDVRLT 390
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ + + T+R + I G
Sbjct: 302 QETTYL--YIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVG 359
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 360 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 416
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 417 VTGSVIKL 424
>gi|327263854|ref|XP_003216732.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Anolis
carolinensis]
Length = 331
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 304
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 305 GSAASISLAQYLINVRLSSE 324
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 304
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 305 GSAASISLAQYLINVRLSSET 325
>gi|193083114|ref|NP_001122386.1| poly(rC)-binding protein 2 isoform g [Homo sapiens]
gi|73996231|ref|XP_857798.1| PREDICTED: poly(rC)-binding protein 2 isoform 15 [Canis lupus
familiaris]
gi|291389261|ref|XP_002711067.1| PREDICTED: poly(rC) binding protein 2-like isoform 4 [Oryctolagus
cuniculus]
gi|338726296|ref|XP_003365293.1| PREDICTED: poly(rC)-binding protein 2 [Equus caballus]
gi|426224374|ref|XP_004006346.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Ovis aries]
gi|119617117|gb|EAW96711.1| poly(rC) binding protein 2, isoform CRA_f [Homo sapiens]
Length = 318
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 89/228 (39%), Gaps = 63/228 (27%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+G I+ V + +
Sbjct: 148 IAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPD 207
Query: 106 LTELH--AEDQA---------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
LT+LH A Q+ D T L +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 267
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
S A IKI+ + G DR VT+TG+ A LI ++LS +T
Sbjct: 268 QMSGAQIKIA---NPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 312
>gi|353237678|emb|CCA69645.1| related to PBP2-PAB1 binding protein [Piriformospora indica DSM
11827]
Length = 406
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 97/173 (56%), Gaps = 15/173 (8%)
Query: 10 PSPDV-HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARI 68
P P V +G++S++ + ++ P ++R L+ A +IGKGGS +N+ + +S A++
Sbjct: 84 PEPAVENGQKSSS---NAATAPPASTIHMRCLIVTQDASIIIGKGGSHVNEIREKSNAKV 140
Query: 69 QLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV-GTKT-KLRL 126
+S E PG +RI+ +SG +D + +A L++ + ++ E V G++ ++
Sbjct: 141 MVS---ESIPGNPERILNVSGALDAVSKAFGLIVRR----INDEPMGPSVPGSRAVTIKF 193
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
I+P+S GS+IGK GA IK + S A + S + G +R++++TG D
Sbjct: 194 IIPHSRMGSVIGKGGAKIKEIQEASGARLNAS--EGMLPGSTERILSVTGVAD 244
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 86/217 (39%), Gaps = 51/217 (23%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S P + I+F++ + G+VIGKGG+ I + Q SGAR L+ S PG+T+RI+ +
Sbjct: 182 SVPGSRAVTIKFIIPHSRMGSVIGKGGAKIKEIQEASGAR--LNASEGMLPGSTERILSV 239
Query: 88 SGTIDEILRAVDLVIDKLLTELHAED---------------------------------- 113
+G D I A + + L+ + A
Sbjct: 240 TGVADAIHIATYYIGNILIQQQEAHGAVGLSYRQSRPPRAFNETMGGGAPGQQYFPGQYQ 299
Query: 114 -----QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL- 167
A G ++ +PN G IIGK GA I SQ+ IKI G+
Sbjct: 300 SPMMPAAVPSGPLQTQQIYIPNDLVGCIIGKGGAKINEIRQTSQSQIKIMEPGAVGVGVG 359
Query: 168 ---------NDRLVTLTGTLDEQMRALELILLKLSED 195
+RLV +TG A+ ++ +L E+
Sbjct: 360 GQQAGPPNEGERLVVITGQPHNIQMAVGMLYHRLEEE 396
>gi|326922311|ref|XP_003207393.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 313
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E +P+
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPH 180
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 58/206 (28%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 85 IMISGTIDEILRAVDLVIDKL----------------LTELH------------------ 110
+ ISGT D I++ V + + LT+LH
Sbjct: 146 VTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFTPLGQTTPA 205
Query: 111 ----------AEDQADDVGTKTKL---------RLIVPNSSCGSIIGKAGATIKSFMDDS 151
+E+ + +G + L L +PN G IIG+ G I S
Sbjct: 206 FPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMS 265
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGT 177
A IKI+ ++ G ++R +T+TGT
Sbjct: 266 GAQIKIA---NATEGSSERQITITGT 288
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 239 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 295
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 296 QYLINARLTSEV 307
>gi|297262518|ref|XP_001105618.2| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Macaca mulatta]
Length = 335
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK---TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
A ++IDKL E+ + + LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKL-EEVFSSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 154 VIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY--- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 130 QVQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK 185
Query: 207 -TYAGVFFSG 215
+ + V F+G
Sbjct: 186 PSSSPVIFAG 195
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 148 IAGIPQSIIECVKQICVVMLETL 170
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 252 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 308
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 309 GSAASISLAQYLINVRLSSE 328
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 252 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 308
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 309 GSAASISLAQYLINVRLSSET 329
>gi|302926012|ref|XP_003054209.1| hypothetical protein NECHADRAFT_30745 [Nectria haematococca mpVI
77-13-4]
gi|256735150|gb|EEU48496.1| hypothetical protein NECHADRAFT_30745 [Nectria haematococca mpVI
77-13-4]
Length = 472
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG +++ + S AR +S ++ G +RI+ +SG +D +
Sbjct: 113 HIRAVISSPEAATVIGKGGENVSNIRKLSNARCTVS---DYQKGAVERILTVSGIVDAVA 169
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E E T LRL++P+ GSIIGK GA I+ + S A +
Sbjct: 170 KAFGLIIRTLNNEPLNESSTSSSKT-YPLRLLIPHILIGSIIGKGGARIREIQEASGARL 228
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
S D ++R + + G D A+ + + TL Q A ++
Sbjct: 229 NAS--DACLPMSSERSLVVMGVAD----AVHIATYYVGS-TLLEQLNDRFGGPAASAYAT 281
Query: 216 FHGMPYGAVPPP---VPAVPHNTAAHYG 240
G P G++P VP P + HYG
Sbjct: 282 RSGAPAGSIPGGMQVVPYCPQPASGHYG 309
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
SS + K +R L+ + L G++IGKGG+ I + Q SGAR L+ S P +++R ++
Sbjct: 187 SSTSSSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR--LNASDACLPMSSERSLV 244
Query: 87 ISGTIDEILRAVDLVIDKLLTELH 110
+ G D + A V LL +L+
Sbjct: 245 VMGVADAVHIATYYVGSTLLEQLN 268
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 398 QIYIPNDMVGAIIGKGGQKINEIRQMSNSVIKINEPQDNS----NERLVTITGTEECNRM 453
Query: 184 ALELILLKLSE 194
AL ++ +L E
Sbjct: 454 ALYMLYSRLGE 464
>gi|242061024|ref|XP_002451801.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
gi|241931632|gb|EES04777.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
Length = 688
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 20/175 (11%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + N G +IGK G TI Q QSGA+IQ++R HE PG R + +SG D+I
Sbjct: 143 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRPVELSGNPDQI 202
Query: 95 LRAVDLVIDKLLTELHAED---------QADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+A L I ++L E A A G +T ++ + N+ G +IGK G TIK
Sbjct: 203 SKAEQL-IKEVLAEADAGSSGGGSGRKYNAPQPGGET-FQMKIANNKVGLVIGKGGETIK 260
Query: 146 SFMDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S + A I++ L D S +R V + GT ++ A +L++ SE+
Sbjct: 261 SMQQKTGARIQVIPLHLPAGDTS----TERTVHIDGTPEQIESAKQLVIEVTSEN 311
>gi|358379880|gb|EHK17559.1| hypothetical protein TRIVIDRAFT_231881 [Trichoderma virens Gv29-8]
Length = 477
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 117 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVS---DYQKGAVERILTVSGIVDAVA 173
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E ++A +KT LRL++P+ GSIIGK G+ I+ + S A
Sbjct: 174 KAFGLIIRTLNNE--PLNEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGAR 231
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 232 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNERFGGPAASAYA 284
Query: 215 GFHGMPYGAVP---PPVPAVPHNTAAHYG 240
G P G++P VP P + HYG
Sbjct: 285 TRSGAPVGSIPGGMQVVPYSPQPASGHYG 313
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 35 TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
TY +R L+ + L G++IGKGGS I + Q SGAR+ S S P +++R +++ G D
Sbjct: 198 TYPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNASDS--CLPMSSERSLVVMGVADA 255
Query: 94 ILRAVDLVIDKLLTELH 110
+ A V LL +L+
Sbjct: 256 VHIATYYVGSTLLEQLN 272
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 403 QIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNS----NERLVTITGTEECNRM 458
Query: 184 ALELILLKLSE 194
AL ++ +L E
Sbjct: 459 ALYMLYSRLGE 469
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS 71
P HG P+ + P P + + N + GA+IGKGG IN+ + SG+ I+++
Sbjct: 379 PQPHGAPQGQPMHA--GMPGTGPITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKIN 436
Query: 72 RSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ + +R++ I+GT + A+ ++ +L
Sbjct: 437 EPQD---NSNERLVTITGTEECNRMALYMLYSRL 467
>gi|312382238|gb|EFR27763.1| hypothetical protein AND_05166 [Anopheles darlingi]
Length = 738
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 270 LRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNV--GSVEKAITIYGNPENCTM 327
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E ++ ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 328 ACKKILEVMQQEANSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 382
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D S + L +R++T+ GT++ + I KL + P + + F G
Sbjct: 383 VSSINDISSFNL-ERIITVKGTIENMSKGESQISAKLRQSYENDLQALAPQS---IMFPG 438
Query: 216 FHGM 219
H M
Sbjct: 439 LHPM 442
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G I++ + S A +KI+ L D +R VT+ GT + Q +
Sbjct: 515 LYIPNNAVGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQEQQTERKVTIIGTPEAQWK 574
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A LI K+ E+ S T V T
Sbjct: 575 AQYLIFEKMREEGFVSGTDDVRLT 598
>gi|402886179|ref|XP_003906515.1| PREDICTED: poly(rC)-binding protein 2 [Papio anubis]
Length = 340
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 7/122 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + ++A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIREVTEAA 130
Query: 155 IK 156
+K
Sbjct: 131 LK 132
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G ++K ++S A I IS + +R++TL G + +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 184 ALELILLKLSEDTLYSQT 201
A +I+ KL ED S T
Sbjct: 71 AFAMIIDKLEEDISSSMT 88
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 257 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 313
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 314 GSAASISLAQYLINVRLSSE 333
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 257 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 313
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 314 GSAASISLAQYLINVRLSSET 334
>gi|383858850|ref|XP_003704912.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Megachile rotundata]
Length = 624
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI + AR+ + R G+ ++ I I G +
Sbjct: 189 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNV--GSLEKAITIYGNPENCTN 246
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E ++ ++ + L+++ N+ G IIGK G TIK M D+ I
Sbjct: 247 ACKKILEVMQQEANSINKGE-----ITLKILAHNNLIGRIIGKGGTTIKRIMQDTDTKIT 301
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---- 205
+S + D + + L +R++T+ GT++ +A +I KL + + Q+M P
Sbjct: 302 VSSINDINSFNL-ERIITVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHP 360
Query: 206 ---YTYAGVFFS----GFHG-----MPYGAVPPPVPAVP----HNTAAHYGPN 242
+ AG+ +S G +G PY A PP VP TA Y PN
Sbjct: 361 MAMMSTAGMGYSSRGPGLYGSGPAPYPYQASLPPQQGVPATDTQETAFLYIPN 413
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG-- 79
P + + + T++ ++ + N GA+IG GS I + SGA ++++ + P
Sbjct: 394 PQQGVPATDTQETAFL--YIPNSSVGAIIGTKGSHIRNIIRFSGASVKIAPIEQDKPAEQ 451
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
T+R + I G+ + +A L+ +K+ E DDV + + ++VP++ G IIGK
Sbjct: 452 QTERKVTIVGSPESQWKAQYLIFEKMREEGFVAG-TDDV--RLTIEILVPSAQVGRIIGK 508
Query: 140 AGATIKSFMDDSQAVIKIS 158
G ++ + ++IK+S
Sbjct: 509 GGQNVRELQRVTGSIIKLS 527
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMR 183
L +PNSS G+IIG G+ I++ + S A +KI+ D +R VT+ G+ + Q +
Sbjct: 409 LYIPNSSVGAIIGTKGSHIRNIIRFSGASVKIAPIEQDKPAEQQTERKVTIVGSPESQWK 468
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A LI K+ E+ + T V T
Sbjct: 469 AQYLIFEKMREEGFVAGTDDVRLT 492
>gi|339234853|ref|XP_003378981.1| putative KH domain protein [Trichinella spiralis]
gi|316978396|gb|EFV61386.1| putative KH domain protein [Trichinella spiralis]
Length = 432
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 114/227 (50%), Gaps = 30/227 (13%)
Query: 13 DVHGKRSTAPVKSLSSD----PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGA-R 67
+V+ TAPV++ +S E+ I+ L+ +GAVIG+ GS I + +S +
Sbjct: 25 NVNSSSLTAPVQAQNSTVPNHGDEQQVMIKVLIPRTASGAVIGRNGSHIASLKRKSLLHQ 84
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK-----T 122
+++S+ E FP +R+++I+G + ++ + + K+ + + D+ K +
Sbjct: 85 LKMSKPSELFP---ERVLLIAGPLSSVVEVIQFTMTKIQEQQAFNTKPDEFDFKHANRSS 141
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ- 181
+++L++ NSS G IIGKAG I+ +++ A +K+S S + +R+VT+ G DE
Sbjct: 142 QVKLVIANSSAGVIIGKAGEEIRVIKEETHAQVKVSSRTQS---VAERVVTILGA-DEAI 197
Query: 182 -MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPP 227
+ AL ++L K++ D + + Y G P P P
Sbjct: 198 TLAALRVVLNKVAADPNSTNNGRISY-----------GQPQAPAPAP 233
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG-TTDRIIMISGTIDEILRAVDLVID 103
+ GAV+GK G T+ D Q +SGA++++SR + R+I+I+G IL+A LV
Sbjct: 350 IVGAVLGKNGFTLLDIQRRSGAKVEVSRRGTVQNAQSAKRLIIITGQQTSILQARALVCA 409
Query: 104 KLLTEL 109
+ EL
Sbjct: 410 TVAAEL 415
>gi|307196422|gb|EFN78011.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Harpegnathos
saltator]
Length = 647
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI S AR+ + R G+ ++ I I G D
Sbjct: 145 LRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNV--GSLEKAITIYGNPDNCTN 202
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK-----------LRLIVPNSSCGSIIGKAGATIK 145
A +++ + E + ++ D G+ + L+++ N+ G IIGK G TIK
Sbjct: 203 ACKKILEVMQQEANNTNKGYDEGSNSDDHGAVNSYEITLKILAHNNLIGRIIGKGGNTIK 262
Query: 146 SFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLY 198
M D+ I +S + D + + L +R++T+ GT++ +A +I KL + +
Sbjct: 263 RIMQDTDTKITVSSINDINSFNL-ERIITVKGTIENMSKAESMISSKLRQSYENDLQAMA 321
Query: 199 SQTMTVP-------YTYAGVFFSGFHGMPYGAVPPPVP 229
Q+M P + AG+ +S YG+ P P P
Sbjct: 322 PQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYP 359
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG--TTDRIIMIS 88
T++ T++ + N GA+IG GS I + SGA ++++ + P T+R + I
Sbjct: 375 TQETTFL--YIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIV 432
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G+ + +A L+ +K+ E + D + + ++VP++ G IIGK G ++
Sbjct: 433 GSPESQWKAQYLIFEKMREEGYVSGTED---VRLTIEILVPSAQVGRIIGKGGQNVRELQ 489
Query: 149 DDSQAVIKIS 158
+ +VIK+S
Sbjct: 490 RVTGSVIKLS 499
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ L D +R VT+ G+ + Q +
Sbjct: 381 LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWK 440
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A LI K+ E+ S T V T
Sbjct: 441 AQYLIFEKMREEGYVSGTEDVRLT 464
>gi|148223740|ref|NP_001083021.1| poly(rC)-binding protein 3 [Danio rerio]
gi|134025331|gb|AAI35089.1| Zgc:162999 protein [Danio rerio]
Length = 350
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +S ARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESSARINVSEGN-----CPERIVTITGPTDAIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++GT + ++ ++ I + + E + T+PY
Sbjct: 133 VQVAGDMLPNS----TERAVTISGTPEAIIQCVKQICVVMLESP--PKGATIPYRPKPAT 186
Query: 209 AGVFFSG 215
A V FSG
Sbjct: 187 APVIFSG 193
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 90 SNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV--AGDMLPNSTERA 147
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT + I++ V + +L
Sbjct: 148 VTISGTPEAIIQCVKQICVVML 169
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + + + N L G +IG+ G+ IN+ + SGA+I+++ + E G++DR I I+
Sbjct: 261 DASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME---GSSDRQITIT 317
Query: 89 GT 90
GT
Sbjct: 318 GT 319
>gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]
Length = 313
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 71 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E +P+
Sbjct: 131 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPH 180
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 60/210 (28%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 84 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 141
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL----------------LTELH-------------- 110
T+R + ISGT D I++ V + + LT+LH
Sbjct: 142 TERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQ 201
Query: 111 --------------AEDQADDVGTKTKL---------RLIVPNSSCGSIIGKAGATIKSF 147
+E+ + +G + L L +PN G IIG+ G I
Sbjct: 202 TNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEI 261
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
S A IKI+ ++ G ++R +T+TGT
Sbjct: 262 RQMSGAQIKIA---NATEGSSERQITITGT 288
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 239 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 295
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 296 QYLINARLTSEV 307
>gi|46108346|ref|XP_381231.1| hypothetical protein FG01055.1 [Gibberella zeae PH-1]
Length = 448
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+P A VIGKGG +++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 114 HVRAVISSPEAATVIGKGGENVSNIRKLSNAKCTVS---DYQKGAVERILTVSGIVDAVA 170
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E ++ +KT LRL++P+ GSIIGK GA I+ D S A
Sbjct: 171 KAFGLIIRTLNNE--PLNEPSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQDASGAR 228
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 229 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNDRFGGPAASAYA 281
Query: 215 GFHGMPYGAVP---PPVPAVPHNTAAHYG 240
G P G++P VP P ++ HYG
Sbjct: 282 TRSGAPAGSIPGGMQVVPYSPQPSSGHYG 310
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 177 IRTLNNEPLNEPSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQDASGARLNASDS-- 234
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +++R +++ G D + A V LL +L+
Sbjct: 235 CLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLN 269
>gi|340521021|gb|EGR51256.1| predicted protein [Trichoderma reesei QM6a]
Length = 475
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 120 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVS---DYQKGAVERILTVSGIVDAVA 176
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E E A +KT LRL++P+ GSIIGK G+ I+ + S A
Sbjct: 177 KAFGLIIRTLNNEPLTE--ASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGAR 234
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 235 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNERFGGPAASAYA 287
Query: 215 GFHGMPYGAVPPP---VPAVPHNTAAHYG 240
G P G++P VP P + HYG
Sbjct: 288 TRSGAPVGSIPGGMQVVPYSPQPASGHYG 316
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDP-TEKPTY------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P TE T +R L+ + L G++IGKGGS I + Q SGAR+ S S
Sbjct: 183 IRTLNNEPLTEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNASDS-- 240
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +++R +++ G D + A V LL +L+
Sbjct: 241 CLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLN 275
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 404 QIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNS----NERLVTITGTEECNRM 459
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 460 ALYMLYSRLESE 471
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 12 PDVHGKRSTAPVKS-LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
P HG P+ + + P + YI N + GA+IGKGG IN+ + SG+ I++
Sbjct: 381 PQAHGAPQGQPMHAGMPGGPITQQIYI----PNDMVGAIIGKGGQKINEIRQMSGSVIKI 436
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 437 NEPQD---NSNERLVTITGTEECNRMALYMLYSRLESEKH 473
>gi|296213265|ref|XP_002753197.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Callithrix
jacchus]
Length = 342
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ L L+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQIFVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 98/260 (37%), Gaps = 71/260 (27%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P + +V G++IGKGG I + + +GA++Q++ + P +T+R I
Sbjct: 90 STAASRPPVTLSLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKL----------------------------------------- 105
I+G I+ V + +
Sbjct: 148 IAGIPQSIIECVKQIFVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPD 207
Query: 106 LTELH--AEDQA---------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
LT+LH A Q+ D T L +PN G IIG+ GA I
Sbjct: 208 LTKLHQLAIQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 267
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY 208
S A IKI+ + G DR VT+TG+ A LI ++LS L + M Y
Sbjct: 268 QMSGAQIKIA---NPVEGSTDRQVTITGSAASISLAQYLINVRLS---LVTGGMGSSYNN 321
Query: 209 AGVFFSGFHGMPYGAVPPPV 228
A +P+ PPP+
Sbjct: 322 ADSSI-----IPFCCSPPPM 336
>gi|380478963|emb|CCF43298.1| KH domain-containing protein [Colletotrichum higginsianum]
Length = 469
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG +++ + SGA+ +S ++ G +RI+ +SG +D
Sbjct: 112 HIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTVS---DYQKGAVERILTVSGVVDAAA 168
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E AE + T LRL++P+ GSIIGK GA I+ + S A +
Sbjct: 169 KAFGLIIRTLNNEPLAEPSSAQSKT-YPLRLLIPHILIGSIIGKGGARIREIQEASGARL 227
Query: 156 KIS 158
S
Sbjct: 228 NAS 230
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 175 IRTLNNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS-- 232
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 233 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 267
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
Query: 1 METNESSYVPSPDVHGKRSTAPVK--SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
M+ + + VP P HG P+ +++ P + YI N + GA+IGKGG IN
Sbjct: 365 MQPHAGAAVPQP--HGAHPAQPIHGGAVAGAPLTQQIYI----PNDMVGAIIGKGGQKIN 418
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+ + SG+ I+++ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 419 EIRQISGSVIKINEPQD---NSNERLVTITGTEECNRMALYMLYSRLESEKH 467
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTG 176
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TG
Sbjct: 391 AGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITG 446
Query: 177 TLDEQMRALELILLKLSED 195
T + AL ++ +L +
Sbjct: 447 TEECNRMALYMLYSRLESE 465
>gi|432906521|ref|XP_004077571.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 434
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 13/145 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + +SGARI +S + +RI+ I+G + I R
Sbjct: 19 LRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG-----SSPERIVTITGPTEGIFR 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ A +V +K LRL+ P S CGS+IGK G+ IK + + A
Sbjct: 74 AFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQ 133
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGT 177
++++ L S +R VT++GT
Sbjct: 134 VQVAGDMLPDS----TERAVTISGT 154
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 112 EDQADD--VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
E+ A D + LRL++ GSIIGK G T+K ++S A I IS +
Sbjct: 5 EEMASDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSP-----E 59
Query: 170 RLVTLTGTLDEQMRALELILLKLSEDTLYSQT 201
R+VT+TG + RA +I K ED + T
Sbjct: 60 RIVTITGPTEGIFRAFSMIAQKFEEDITAAMT 91
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R + G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 97 SKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQV--AGDMLPDSTERAVTISGT 154
Query: 91 IDEILRAVDLVIDKLL 106
I + V + +L
Sbjct: 155 PQAITQCVRHICSVML 170
>gi|67969673|dbj|BAE01185.1| unnamed protein product [Macaca fascicularis]
Length = 324
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 94/179 (52%), Gaps = 19/179 (10%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK G ++ + +SGARI +S + +RII ++G + I +A ++IDKL
Sbjct: 7 GSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFKAFAMIIDKLE 61
Query: 107 TELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDH 162
++ + ++ LRL+VP S CGS+IGK G IK + + A ++++ L +
Sbjct: 62 EDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN 121
Query: 163 SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY----TYAGVFFSG 215
S +R +T+ G + ++ I + + E S + +T+PY + + V F+G
Sbjct: 122 S----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAG 176
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 71 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 128
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 129 IAGIPQSIIECVKQICVVMLETL 151
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 219 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 275
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 276 GSAASISLAQYLI 288
>gi|340914749|gb|EGS18090.1| putative pab1-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 484
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG + + SGAR +S ++ G +RI+ +SG +D +
Sbjct: 126 HIRAVISSPEAATIIGKGGENVTKIRQMSGARCTVS---DYQKGAVERILTVSGIVDAVA 182
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E ++ + +KT LRL++P+ GSIIGK GA IK + S A
Sbjct: 183 KAFGLIIRTLNNE--PLNEPSNQHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGAR 240
Query: 155 IKIS 158
+ S
Sbjct: 241 LNAS 244
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 189 IRTLNNEPLNEPSNQHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGARLNASDS-- 246
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 247 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 281
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 407 GQTITQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITGT 462
Query: 178 LDEQMRALELILLKLSED 195
+ AL ++ +L +
Sbjct: 463 EECNRMALYMLYSRLENE 480
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT + A
Sbjct: 413 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEECNRMA 469
Query: 98 VDLVIDKLLTELH 110
+ ++ +L E H
Sbjct: 470 LYMLYSRLENEKH 482
>gi|291393785|ref|XP_002713277.1| PREDICTED: poly(rC) binding protein 4 [Oryctolagus cuniculus]
Length = 403
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G P YGAV P
Sbjct: 189 GTVLLSANQGFPVQGQYGAVTP 210
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFPVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|307189125|gb|EFN73581.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Camponotus
floridanus]
Length = 587
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 22/207 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI S AR+ + R G+ ++ I I G +
Sbjct: 149 LRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNV--GSLEKAITIYGNPENCTN 206
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++D + E + ++ + L+++ N+ G IIGK G TIK M D+ + I
Sbjct: 207 ACKKILDVMQQEAASTNKGE-----ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKIT 261
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---- 205
+S + D + + L +R++T+ GT++ +A +I KL + + Q+M P
Sbjct: 262 VSSINDINSFNL-ERIITVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHP 320
Query: 206 ---YTYAGVFFSGFHGMPYGAVPPPVP 229
+ AG+ +S YG+ P P P
Sbjct: 321 MAMMSTAGMGYSSRGPGLYGSGPAPYP 347
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG--TTDRIIMIS 88
T++ T++ + N GA+IG GS I + SGA ++++ + P T+R + I
Sbjct: 363 TQETTFL--YIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTII 420
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G+ + +A L+ +K+ E + D + + ++VP++ G IIGK G ++
Sbjct: 421 GSPESQWKAQYLIFEKMREEGYVAGTED---VRLTIEILVPSTQVGRIIGKGGQNVRELQ 477
Query: 149 DDSQAVIKIS 158
+ +VIK+S
Sbjct: 478 RVTGSVIKLS 487
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ L D +R VT+ G+ + Q +
Sbjct: 369 LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIIGSPESQWK 428
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A LI K+ E+ + T V T
Sbjct: 429 AQYLIFEKMREEGYVAGTEDVRLT 452
>gi|291409713|ref|XP_002721143.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 340
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKHICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG GA I S A+IKI+ ++ G DR VT+T
Sbjct: 257 DASAQTTSHELTIPNDLIGCIIGCQGAKINEICQMSGALIKIA---NTVEGSTDRQVTIT 313
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 314 GSAASISLAQYLINVRLSSET 334
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG G+ IN+ SGA I+++ + E G+TDR + I+
Sbjct: 257 DASAQTTSHELTIPNDLIGCIIGCQGAKINEICQMSGALIKIANTVE---GSTDRQVTIT 313
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 314 GSAASISLAQYLINVRLSSE 333
>gi|392578180|gb|EIW71308.1| hypothetical protein TREMEDRAFT_42752 [Tremella mesenterica DSM
1558]
Length = 299
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 81/144 (56%), Gaps = 8/144 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ A +IGKGG+ +ND + +S AR+ +S E PG +RI+ +SG +D + +
Sbjct: 1 MRCLIVTQDASIIIGKGGAHVNDIRERSHARVTVS---ESIPGNPERILNVSGPLDAVAK 57
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L++ ++ E D A G++ ++ I+PNS GS+IGK GA IK + S A +
Sbjct: 58 AFGLIVRRINDEPF--DVASVPGSRAVTIKFIIPNSRMGSVIGKQGAKIKEIQEASGARL 115
Query: 156 KISRLDHSYYGLNDRLVTLTGTLD 179
S + G +R+++ +G D
Sbjct: 116 NAS--ESMLPGSTERVLSCSGVAD 137
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 90/227 (39%), Gaps = 54/227 (23%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
++S P + I+F++ N G+VIGK G+ I + Q SGAR L+ S PG+T+R++
Sbjct: 73 VASVPGSRAVTIKFIIPNSRMGSVIGKQGAKIKEIQEASGAR--LNASESMLPGSTERVL 130
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT--KTKLR------------------ 125
SG D I AV I +L E + G +T R
Sbjct: 131 SCSGVADAIHIAV-YYIGTILLEYQERNPGSTSGVYRQTGARGGPSGSYGGGGSGGGGGG 189
Query: 126 --------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
+ +PNS G+IIGK GA I SQ I+++
Sbjct: 190 GGGGGGGGGGGGGGSGGLPPGMQMQQIFIPNSLVGAIIGKGGAKINEIRTQSQCQIRVTD 249
Query: 160 LDHSY-----YGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQT 201
++RLVT+ G A++L+ +L + QT
Sbjct: 250 PGTPAGPGQPVNPDERLVTIQGLPQNINIAVQLLYGRLEAEKQKMQT 296
>gi|171687621|ref|XP_001908751.1| hypothetical protein [Podospora anserina S mat+]
gi|170943772|emb|CAP69424.1| unnamed protein product [Podospora anserina S mat+]
Length = 500
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 80/145 (55%), Gaps = 8/145 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG ++ + SGA+ +S ++ G +RI+ +SG +D
Sbjct: 136 HIRAVISSPEAATIIGKGGENVSKIRQSSGAKCTVS---DYQKGAVERILTVSGVVDAAA 192
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E +E + +KT LRL++P+ GSIIGK G+ IK + S A
Sbjct: 193 KAFGLIIRTLNNEPLSE--PSNQHSKTYPLRLLIPHVLIGSIIGKGGSRIKEIQEASGAR 250
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLD 179
+ S D ++R + +TG D
Sbjct: 251 LNAS--DSCLPASSERSLVVTGVAD 273
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGGS I + Q SGAR+ S S
Sbjct: 199 IRTLNNEPLSEPSNQHSKTYPLRLLIPHVLIGSIIGKGGSRIKEIQEASGARLNASDS-- 256
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +++R ++++G D + A V LL +L+
Sbjct: 257 CLPASSERSLVVTGVADAVHIATYYVGSTLLEQLN 291
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 429 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITGTDECNKM 484
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 485 ALYMLYTRLENE 496
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 425 PMTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTDEC 481
Query: 94 ILRAVDLVIDKLLTELH 110
A+ ++ +L E H
Sbjct: 482 NKMALYMLYTRLENEKH 498
>gi|429859891|gb|ELA34647.1| kh domain rna binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 471
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 2 ETNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQ 61
E+ E+ + S V G P S S D + +IR ++S+P A VIGKGG +++ +
Sbjct: 83 ESTETKPIQS-SVAGAVPATPSASASHDERDW-IHIRAVISSPEAATVIGKGGENVSNIR 140
Query: 62 SQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK 121
SGA+ +S ++ G +RI+ +SG +D +A L+I L E AE + T
Sbjct: 141 KMSGAKCTVS---DYQKGAVERILTVSGVVDAAAKAFGLIIRTLNNEPLAEPSSAQSKT- 196
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
LRL++P+ GSIIGK GA I+ + S A + S
Sbjct: 197 YPLRLLIPHILIGSIIGKGGARIREIQEASGARLNAS 233
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 178 IRTLNNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS-- 235
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 236 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 270
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
Query: 1 METNESSYVPSPDVHGKRSTAPVK--SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
M+ + + VP P HG P+ ++ P + YI N + GA+IGKGG IN
Sbjct: 367 MQPHAGAAVPQP--HGAHPAQPMHGGAMPGAPLTQQIYI----PNDMVGAIIGKGGQKIN 420
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+ + SG+ I+++ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 421 EIRQISGSVIKINEPQD---NSNERLVTITGTEECNRMALYMLYSRLESEKH 469
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 394 GAPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITGT 449
Query: 178 LDEQMRALELILLKLSED 195
+ AL ++ +L +
Sbjct: 450 EECNRMALYMLYSRLESE 467
>gi|328723977|ref|XP_001952825.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Acyrthosiphon pisum]
Length = 563
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 12/195 (6%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
++ + TE P +R LV + + GA+IG+GGSTI Q+ AR+ + R G+ ++
Sbjct: 140 TIGNRQTEFP--LRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNV--GSLEKA 195
Query: 85 IMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
I I G + A +++ + E +++D + L+++ N+ G IIGK G TI
Sbjct: 196 ITIYGNPENCTNACRKILEVMQQEATNTNKSDVI-----LKILAHNNLIGRIIGKEGNTI 250
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K M +++ I +S ++ +R++T+ G+++ +A I KL +
Sbjct: 251 KRIMSETETKITVSSINDINSFNYERIITVKGSIENMSKAEAQISAKLRQSFENDLQSMA 310
Query: 205 PYTYAGVFFSGFHGM 219
P T V F G H M
Sbjct: 311 PQT---VMFPGLHPM 322
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT------------TDRIIM 86
+ N GA+IG GS I SGA ++++ + G R +
Sbjct: 374 LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVT 433
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
I GT D +A ++ DKL E + + + + ++VP+S G IIG+ G+ ++
Sbjct: 434 IVGTADSQWKAQGMIFDKLRDEGFVPNNEE---VRLTVEILVPSSQVGRIIGRGGSNVRE 490
Query: 147 FMDDSQAVIKI 157
+ ++IK+
Sbjct: 491 LQRVTGSIIKL 501
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL------------NDRLVT 173
L +PNS+ G+IIG G+ I+S + S A +K++ ++ G+ R VT
Sbjct: 374 LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVT 433
Query: 174 LTGTLDEQMRALELILLKLSED 195
+ GT D Q +A +I KL ++
Sbjct: 434 IVGTADSQWKAQGMIFDKLRDE 455
>gi|328723973|ref|XP_003247998.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 3 [Acyrthosiphon pisum]
gi|328723975|ref|XP_003247999.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 4 [Acyrthosiphon pisum]
Length = 553
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 18/195 (9%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
++ + TE P +R LV + + GA+IG+GGSTI Q+ AR+ + R G+ ++
Sbjct: 140 TIGNRQTEFP--LRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNV--GSLEKA 195
Query: 85 IMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
I I G + A +++ + E +++D + L+++ N+ G IIGK G TI
Sbjct: 196 ITIYGNPENCTNACRKILEVMQQEATNTNKSDVI-----LKILAHNNLIGRIIGKEGNTI 250
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K M +++ I +S ++ +R++T+ G+++ +A I KL +
Sbjct: 251 KRIMSETETKITVSSFNY------ERIITVKGSIENMSKAEAQISAKLRQSFENDLQSMA 304
Query: 205 PYTYAGVFFSGFHGM 219
P T V F G H M
Sbjct: 305 PQT---VMFPGLHPM 316
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT------------TDRIIM 86
+ N GA+IG GS I SGA ++++ + G R +
Sbjct: 368 LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVT 427
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
I GT D +A ++ DKL E + + + + ++VP+S G IIG+ G+ ++
Sbjct: 428 IVGTADSQWKAQGMIFDKLRDEGFVPNNEE---VRLTVEILVPSSQVGRIIGRGGSNVRE 484
Query: 147 FMDDSQAVIKI 157
+ ++IK+
Sbjct: 485 LQRVTGSIIKL 495
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL------------NDRLVT 173
L +PNS+ G+IIG G+ I+S + S A +K++ ++ G+ R VT
Sbjct: 368 LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVT 427
Query: 174 LTGTLDEQMRALELILLKLSED 195
+ GT D Q +A +I KL ++
Sbjct: 428 IVGTADSQWKAQGMIFDKLRDE 449
>gi|357140395|ref|XP_003571754.1| PREDICTED: uncharacterized protein LOC100835547 [Brachypodium
distachyon]
Length = 692
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 86/178 (48%), Gaps = 26/178 (14%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + N G +IGK G TI Q QSGA+IQ++R + PG+ R + +SGT ++I
Sbjct: 143 TTKKIDIPNGRVGVIIGKSGETIKHLQLQSGAKIQVTRDMDVQPGSQTRSVDLSGTPEQI 202
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVP------------NSSCGSIIGKAGA 142
RA +L+ D L AE A GT + + P N+ G +IGK G
Sbjct: 203 SRAEELIRDVL-----AEADAGSSGTVSNRKYNAPQPGAEQFQMQIANNKVGLVIGKGGE 257
Query: 143 TIKSFMDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
TIKS S A I++ L D S +R + + GT D+ A +L+ SE+
Sbjct: 258 TIKSMQAKSGARIQVIPLHLPPGDTS----TERTLYIDGTTDQIEIAKQLVAEVTSEN 311
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G+ TK ++ +PN G IIGK+G TIK S A I+++R G R V L+GT
Sbjct: 141 GSTTK-KIDIPNGRVGVIIGKSGETIKHLQLQSGAKIQVTRDMDVQPGSQTRSVDLSGTP 199
Query: 179 DEQMRALELILLKLSE 194
++ RA ELI L+E
Sbjct: 200 EQISRAEELIRDVLAE 215
>gi|342880970|gb|EGU81981.1| hypothetical protein FOXB_07505 [Fusarium oxysporum Fo5176]
Length = 471
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG +++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 112 HIRAVISSPEAATVIGKGGENVSNIRKLSNAKCTVS---DYQKGAVERILTVSGIVDAVA 168
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E +++ +KT LRL++P+ GSIIGK GA I+ + S A
Sbjct: 169 KAFGLIIRTLNNE--PLNESSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR 226
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 227 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNDRFGGPAASAYA 279
Query: 215 GFHGMPYGAVP---PPVPAVPHNTAAHYG 240
G P G++P VP P + HYG
Sbjct: 280 TRSGAPAGSIPGGMQVVPYSPQPASGHYG 308
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
SS + K +R L+ + L G++IGKGG+ I + Q SGAR+ S S P +++R ++
Sbjct: 186 SSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS--CLPMSSERSLV 243
Query: 87 ISGTIDEILRAVDLVIDKLLTELH 110
+ G D + A V LL +L+
Sbjct: 244 VMGVADAVHIATYYVGSTLLEQLN 267
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 397 QIYIPNDMVGAIIGKGGQKINEIRQMSNSVIKINEPQDNS----NERLVTITGTEECNRM 452
Query: 184 ALELILLKLSE 194
AL ++ +L E
Sbjct: 453 ALYMLYSRLGE 463
>gi|108862919|gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|222617409|gb|EEE53541.1| hypothetical protein OsJ_36750 [Oryza sativa Japonica Group]
Length = 517
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
+ R LV GAVIG+ G I +S ARI++ + PG DR +MIS
Sbjct: 115 SVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVL---DGPPGVPDRAVMISAKDEPD 171
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+D +LR + D L E +A GT RL+VP S GS+IGK GATI
Sbjct: 172 APLPPAVDGLLRVHKRITDGLDGESDQPQRA--AGTVGPTRLLVPASQAGSLIGKQGATI 229
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
KS D S+ V++I +DR+V + G + +A+ELI L
Sbjct: 230 KSIQDASKCVLRILESVPPVALSDDRVVEIQGEPLDVHKAVELIASHL 277
>gi|388854780|emb|CCF51673.1| related to PBP2-PAB1 binding protein [Ustilago hordei]
Length = 446
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ A +IGK G IN+ + +S AR+ +S E PG +RI+ +SG +D + +
Sbjct: 142 MRTLIVTSDASIIIGKSGKHINEIRDKSNARLNIS---EIIPGNPERILTVSGPLDAVSK 198
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L++ ++ E DQ G+K+ +R IVPNS GS+IGK G+ IK + S A
Sbjct: 199 AFGLIVRRINDEPF--DQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGA-- 254
Query: 156 KISRLDHSYYGLNDRLVTLTGTLD 179
+++ + G +R+++++G D
Sbjct: 255 RLTAGEAMLPGSTERVLSISGVAD 278
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P K IRF+V N G+VIGK GS I + Q SGAR L+ PG+T+R++ ISG
Sbjct: 218 PGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGAR--LTAGEAMLPGSTERVLSISG 275
Query: 90 TIDEILRAV 98
D + AV
Sbjct: 276 VADAVHIAV 284
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D ++ T+ +R ++ S IIGK+G I D S A + IS + G +R++
Sbjct: 131 DSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEI---IPGNPERIL 187
Query: 173 TLTGTLDEQMRALELILLKLSED 195
T++G LD +A LI+ +++++
Sbjct: 188 TVSGPLDAVSKAFGLIVRRINDE 210
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL---SRSHEFFPGTTDRIIMISGTIDEI 94
+ + N L G +IGKGGS IN+ +S S ++I++ G +R++ I+G I
Sbjct: 363 QIFIPNDLVGCIIGKGGSKINEIRSMSASQIKIMEPGAGIAAGGGGNERLVTITGPPPNI 422
Query: 95 LRAVDLVIDKLLTE 108
AV L+ +L E
Sbjct: 423 QMAVSLLYQRLEQE 436
>gi|212275119|ref|NP_001130556.1| uncharacterized protein LOC100191655 [Zea mays]
gi|194689470|gb|ACF78819.1| unknown [Zea mays]
gi|223943199|gb|ACN25683.1| unknown [Zea mays]
gi|413936736|gb|AFW71287.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
gi|413936737|gb|AFW71288.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
Length = 690
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 15 HGKRSTAPVKSLSSDPT-----EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
HG S P+ S SS P + T + + N G +IGK G TI Q QSGA+IQ
Sbjct: 118 HGA-SIPPLSSQSSAPQYSYGGHQGTSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQ 176
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED----------QADDVG 119
++R HE PG R + +SG ++I +A L I +++ E A A G
Sbjct: 177 VTRDHEAEPGALTRQVELSGNPEQISKAEQL-IKEVIAEADAGSSGAVSGGRKYNAPQPG 235
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-----DHSYYGLNDRLVTL 174
+T ++ + N+ G IIGK G TIKS S A I++ L D S +R V +
Sbjct: 236 AET-FQMKIANNKVGLIIGKGGETIKSMQAKSGARIQVIPLHLPAGDTS----TERTVHI 290
Query: 175 TGTLDEQMRALELILLKLSED 195
GT ++ A +L+ SE+
Sbjct: 291 DGTQEQIEHAKQLVAEVTSEN 311
>gi|170036665|ref|XP_001846183.1| igf2 mRNA binding protein [Culex quinquefasciatus]
gi|167879496|gb|EDS42879.1| igf2 mRNA binding protein [Culex quinquefasciatus]
Length = 520
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 29/217 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV++ + GA+IG+ GSTI S AR+ + R G+ ++ I I G +
Sbjct: 128 LRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNV--GSLEKAITIYGNPENCTS 185
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 186 ACKRILEVMQQEANNTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 240
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVPYTY- 208
+S + D + + L +R++T+ G++D R I KL + L Q++ P +
Sbjct: 241 VSSINDINSFNL-ERIITVKGSIDNMSRGESQISAKLRQSYENDLQALAPQSIMFPGLHP 299
Query: 209 --------AGVFFSGFHGMPYGAV-----PPPVPAVP 232
G+ F+G GM G+ PP P VP
Sbjct: 300 MAMMSTAGNGMGFAGRSGMYPGSSYPMYQPPTAPGVP 336
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFF 77
TAP S ++ TY+ + N GA+IG GS I + SGA ++++ + +
Sbjct: 331 TAPGVPPGSSDVQETTYL--YIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPL 388
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
T+R + I GT + +A L+ +K+ E DDV + + ++VP++ G II
Sbjct: 389 EQQTERKVTIVGTPEAQWKAQYLIFEKMREEGFVSG-TDDV--RLTVEILVPSAQVGRII 445
Query: 138 GKAGATIKSFMDDSQAVIKI 157
GK G ++ + ++IK+
Sbjct: 446 GKGGQNVRELQRVTGSIIKL 465
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I++ + S A +KI+ L D +R VT+ GT + Q +
Sbjct: 348 LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGTPEAQWK 407
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A LI K+ E+ S T V T
Sbjct: 408 AQYLIFEKMREEGFVSGTDDVRLT 431
>gi|71023653|ref|XP_762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
gi|46101621|gb|EAK86854.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
Length = 850
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 85/154 (55%), Gaps = 8/154 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
SS+ +R L+ A +IGK G IN+ + +S AR+ +S E PG +RI+
Sbjct: 539 SSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNIS---EIIPGNPERILT 595
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIK 145
+SG +D + +A L++ ++ E D A G+K+ +R IVPNS GS+IGK G+ IK
Sbjct: 596 VSGPLDAVSKAFGLIVRRINDEPF--DLASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIK 653
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+ S A +++ + G +R+++++G D
Sbjct: 654 EIQEASGA--RLTAGEAMLPGSTERVLSISGVAD 685
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 94/227 (41%), Gaps = 60/227 (26%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+S P K IRF+V N G+VIGK GS I + Q SGAR L+ PG+T+R++
Sbjct: 621 LASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGAR--LTAGEAMLPGSTERVL 678
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDV--------------------------- 118
ISG D + AV V LL H + A+++
Sbjct: 679 SISGVADAVHIAVYYVGSILLE--HPDRNANNLPYRPTAGGPSTRAGAAGANPYAAPQQP 736
Query: 119 -------------------------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
G++T+ ++ +PN G IIGK G+ I S +
Sbjct: 737 FGYGAPAAGFGGAPAGAGGAPQLPPGSQTQ-QIFIPNDLVGCIIGKGGSKINEIRSMSAS 795
Query: 154 VIKI---SRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
IKI + N+RLVT+TG A+ L+ +L ++ +
Sbjct: 796 HIKIMEPGAGIAAGGSGNERLVTITGPPPNIQMAVSLLYQRLEQEKM 842
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D ++ T+ +R ++ S IIGK+G I D S A + IS + G +R++
Sbjct: 538 DSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEI---IPGNPERIL 594
Query: 173 TLTGTLDEQMRALELILLKLSED 195
T++G LD +A LI+ +++++
Sbjct: 595 TVSGPLDAVSKAFGLIVRRINDE 617
>gi|367043886|ref|XP_003652323.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
gi|346999585|gb|AEO65987.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
Length = 482
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 124 HIRAVISSPEAATVIGKGGENVSKIRQMSGAKCTVS---DYQKGAVERILTVSGIVDAVA 180
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E ++ + +KT LRL++P+ GSIIGK GA IK + S A
Sbjct: 181 KAFGLIIRTLNNE--PLNEPSNQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGAR 238
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D +R + + G D A+ + + TL Q A ++
Sbjct: 239 LNAS--DSCLPLSTERSLVVMGVAD----AVHIATYYVG-STLLEQLNERFGGPAASAYA 291
Query: 215 GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGR 246
G P G VP + VP+N G N G R
Sbjct: 292 TRSGGPAGTVPGGMQVVPYNPQPAGG-NYGNR 322
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 187 IRTLNNEPLNEPSNQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDS-- 244
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 245 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 279
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 405 GAPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITGT 460
Query: 178 LDEQMRALELILLKLSED 195
+ AL ++ +L +
Sbjct: 461 EECNRIALYMLYSRLESE 478
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 407 PLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEEC 463
Query: 94 ILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 464 NRIALYMLYSRLESEKH 480
>gi|348518109|ref|XP_003446574.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 349
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 21/197 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + SGARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEGN-----CPERIVTITGPTDAIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 73 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G + ++ ++ I + L E + T+PY
Sbjct: 133 VQVAGDMLPNS----TERAVTISGAPEAIIQCVKQICVVLLESP--PKGATIPYRPKPAS 186
Query: 209 AGVFFSG--FHGMPYGA 223
V FSG P GA
Sbjct: 187 TPVIFSGGQVRADPLGA 203
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + + + N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+
Sbjct: 260 DASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME---GSSERQITIT 316
Query: 89 GTIDEILRAVDLV 101
GT I A L+
Sbjct: 317 GTPANISLAQYLI 329
>gi|310790849|gb|EFQ26382.1| KH domain-containing protein [Glomerella graminicola M1.001]
Length = 471
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + SGA+ +S ++ G +RI+ +SG +D
Sbjct: 113 HIRAVISSPEAATIIGKGGENVSNIRKMSGAKCTVS---DYQKGAVERILTVSGVVDAAA 169
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E AE + T LRL++P+ GSIIGK GA I+ + S A +
Sbjct: 170 KAFGLIIRTLNNEPLAEPSSAQSKT-YPLRLLIPHILIGSIIGKGGARIREIQEASGARL 228
Query: 156 KIS 158
S
Sbjct: 229 NAS 231
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 176 IRTLNNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS-- 233
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 234 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 268
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
M+ + + VP P HG P+ + P + + N + GA+IGKGG IN+
Sbjct: 367 MQPHAGAAVPQP--HGAHPAQPMHGAAV--AGAPLTQQIYIPNDMVGAIIGKGGQKINEI 422
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+ SG+ I+++ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 423 RQISGSVIKINEPQD---NSNERLVTITGTEECNRMALYMLYSRLESEKH 469
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTG 176
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TG
Sbjct: 393 AGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITG 448
Query: 177 TLDEQMRALELILLKLSED 195
T + AL ++ +L +
Sbjct: 449 TEECNRMALYMLYSRLESE 467
>gi|226494805|ref|NP_001148654.1| KH domain containing protein [Zea mays]
gi|195621126|gb|ACG32393.1| KH domain containing protein [Zea mays]
Length = 529
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
+ R LV GAVIG+ G I +S ARI++ E P +R +MIS
Sbjct: 107 SVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVL---EGPPAVPERAVMISAKDEPD 163
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGAT 143
+D +LR + D L TE DQ T RL+VP S GS+IGK GAT
Sbjct: 164 TELPPAVDGLLRVHRRITDGLETET---DQPQRATVNTGPTRLLVPASQAGSLIGKQGAT 220
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
IKS D S+ V++I +DR+V + G + +A+ELI L
Sbjct: 221 IKSIQDASKCVLRIVENVPPVALNDDRVVEIQGEPHDSHKAVELIASHL 269
>gi|328723971|ref|XP_003247997.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Acyrthosiphon pisum]
Length = 559
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 12/195 (6%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
++ + TE P +R LV + + GA+IG+GGSTI Q+ AR+ + R G+ ++
Sbjct: 140 TIGNRQTEFP--LRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNV--GSLEKA 195
Query: 85 IMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
I I G + A +++ + E +++D + L+++ N+ G IIGK G TI
Sbjct: 196 ITIYGNPENCTNACRKILEVMQQEATNTNKSDVI-----LKILAHNNLIGRIIGKEGNTI 250
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
K M +++ I +S ++ +R++T+ G+++ +A I KL +
Sbjct: 251 KRIMSETETKITVSSINDINSFNYERIITVKGSIENMSKAEAQISAKLRQSFENDLQSMA 310
Query: 205 PYTYAGVFFSGFHGM 219
P T V F G H M
Sbjct: 311 PQT---VMFPGLHPM 322
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT------------TDRIIM 86
+ N GA+IG GS I SGA ++++ + G R +
Sbjct: 374 LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVT 433
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
I GT D +A ++ DKL E + + + + ++VP+S G IIG+ G+ ++
Sbjct: 434 IVGTADSQWKAQGMIFDKLRDEGFVPNNEE---VRLTVEILVPSSQVGRIIGRGGSNVRE 490
Query: 147 FMDDSQAVIKI 157
+ ++IK+
Sbjct: 491 LQRVTGSIIKL 501
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL------------NDRLVT 173
L +PNS+ G+IIG G+ I+S + S A +K++ ++ G+ R VT
Sbjct: 374 LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGVVGNAGDANSAQQASRKVT 433
Query: 174 LTGTLDEQMRALELILLKLSED 195
+ GT D Q +A +I KL ++
Sbjct: 434 IVGTADSQWKAQGMIFDKLRDE 455
>gi|320583120|gb|EFW97336.1| RNA binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 404
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 79/152 (51%), Gaps = 10/152 (6%)
Query: 31 TEKPTYIRF--LVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
+ PTY+ F L S A++GKGG TIN + S AR+ +S E G +R+I +
Sbjct: 74 NDDPTYVHFRMLCSINETAAIVGKGGETINRIKEMSSARVNVS---ENLKGIPERVITVR 130
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSF 147
G + + +A L+ ++ E +QA V +K L+L+ P++ G IIGK GA +
Sbjct: 131 GPAEYVAKAFGLITRAIMDEPF--NQASTVESKQINLKLLFPHTIIGYIIGKRGARFREI 188
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
D+S A +K S D DR++ +TG D
Sbjct: 189 EDNSAAALKAS--DQILPASTDRILHITGVAD 218
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
++ L + + G +IGK G+ + + S A L S + P +TDRI+ I+G D I
Sbjct: 165 LKLLFPHTIIGYIIGKRGARFREIEDNSAA--ALKASDQILPASTDRILHITGVADAI 220
>gi|358400710|gb|EHK50036.1| hypothetical protein TRIATDRAFT_51252 [Trichoderma atroviride IMI
206040]
Length = 477
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 119 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVS---DYQKGAVERILTVSGIVDAVA 175
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E +E A +KT LRL++P+ GSIIGK G+ I+ + S A
Sbjct: 176 KAFGLIIRTLNNEPLSE--ASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGAR 233
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A + L E ++ P A ++
Sbjct: 234 LNAS--DSCLPMSSERSLVVMGVADAVHIATYYVGSTLLEQ--LNERFGGPGASA---YA 286
Query: 215 GFHGMPYGAVPPP---VPAVPHNTAAHYG 240
G P G++P VP P + HYG
Sbjct: 287 TRSGAPVGSIPGGMQVVPYSPQPASGHYG 315
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S +S + K +R L+ + L G++IGKGGS I + Q SGAR+ S S P +++R
Sbjct: 191 SEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNASDS--CLPMSSERS 248
Query: 85 IMISGTIDEILRAVDLVIDKLLTELH 110
+++ G D + A V LL +L+
Sbjct: 249 LVVMGVADAVHIATYYVGSTLLEQLN 274
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 403 QIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNS----NERLVTITGTEECNRM 458
Query: 184 ALELILLKLSE 194
AL ++ +L E
Sbjct: 459 ALYMLYSRLGE 469
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 12 PDVHGKRSTAPVKS-LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
P HG P+ + + P + YI N + GA+IGKGG IN+ + SG+ I++
Sbjct: 380 PQAHGAPQGQPMHAGMPGGPITQQIYI----PNDMVGAIIGKGGQKINEIRQMSGSVIKI 435
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ + + +R++ I+GT + A+ ++ +L
Sbjct: 436 NEPQD---NSNERLVTITGTEECNRMALYMLYSRL 467
>gi|426201505|gb|EKV51428.1| hypothetical protein AGABI2DRAFT_182391 [Agaricus bisporus var.
bisporus H97]
Length = 340
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 10/162 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGK G + D + Q+G + +S+ PG +R++ +SG++D + +
Sbjct: 27 LRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSK---VIPGVHERVLTVSGSVDAVAK 83
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L+I +L+T A T T +RL++ ++ G+IIG+ G IK+ D+S A +
Sbjct: 84 AYTLIITQLVTASPASPVVSSPSTIHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARM 143
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S+ L S +R+V + G + RA+E I L ED
Sbjct: 144 VASKEMLPQS----TERIVEVQGAPEAIGRAVEEIGKCLLED 181
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+ +P + S P+ T IR L+S+ L G +IG+ G I Q SGAR+ S+ E P
Sbjct: 94 TASPASPVVSSPSTIHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARMVASK--EMLP 151
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
+T+RI+ + G + I RAV+ + LL ED +GT
Sbjct: 152 QSTERIVEVQGAPEAIGRAVEEIGKCLL-----EDWERGLGT 188
>gi|409083451|gb|EKM83808.1| hypothetical protein AGABI1DRAFT_117279 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 340
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 10/162 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGK G + D + Q+G + +S+ PG +R++ +SG++D + +
Sbjct: 27 LRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSK---VIPGVHERVLTVSGSVDAVAK 83
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L+I +L+T A T T +RL++ ++ G+IIG+ G IK+ D+S A +
Sbjct: 84 AYTLIITQLVTASPASPVVSSPSTVHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARM 143
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S+ L S +R+V + G + RA+E I L ED
Sbjct: 144 VASKEMLPQS----TERIVEVQGAPEAIGRAVEEIGKCLLED 181
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
+ +P + S P+ T IR L+S+ L G +IG+ G I Q SGAR+ S+ E P
Sbjct: 94 TASPASPVVSSPSTVHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARMVASK--EMLP 151
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
+T+RI+ + G + I RAV+ + LL ED +GT
Sbjct: 152 QSTERIVEVQGAPEAIGRAVEEIGKCLL-----EDWERGLGT 188
>gi|357447239|ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
V SL + +E+ +R L + G +IGKGG TI + SGARI++ S
Sbjct: 301 VSSLGASQSEE-LIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLI 359
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTE-LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAG 141
I T D AV+ V+ LL E ++ ED A +RL+VP+ G IIG++G
Sbjct: 360 TITATESTSDLKSVAVEAVL--LLQEKINDEDDA-----PVSIRLLVPSKVIGCIIGRSG 412
Query: 142 ATIKSFMDDSQAVIKISRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
A I ++A I+ISR + Y ND LV + G +D AL I+L+L ED L ++
Sbjct: 413 AIINEIRKRTKADIQISRSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRLREDVLKNK 472
Query: 201 TM 202
+
Sbjct: 473 DI 474
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 82/200 (41%), Gaps = 37/200 (18%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI---------- 87
R L N + G+VIGK G IN + +S A++++ + FPG R+I I
Sbjct: 45 RILCPNEVIGSVIGKNGKVINSIRQESRAKVKVV---DPFPGAKHRVITIFCHVKNKEEI 101
Query: 88 ------------SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGS 135
D +++ + + + T A D K + +++VP+S
Sbjct: 102 EIEDEFDNEKPLCAAQDALIKVHSAISNSIET---AGDSEKKRKNKDECQILVPSSQSAI 158
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTGTLDEQMRAL---EL 187
+IGKAGATIK ++ IK+ D HS D V L G + RAL
Sbjct: 159 LIGKAGATIKQLRVKTRTNIKVVPKDAADPEHSCAMEFDNFV-LVGESEAVKRALFAVST 217
Query: 188 ILLKLSEDTLYSQTMTVPYT 207
I+ K S TVP T
Sbjct: 218 IMYKFSPKEDIPLDTTVPET 237
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L ++VP ++ G ++GK GA + + S A ++IS SY G DR+ ++GT +E+
Sbjct: 563 LEMVVPANAVGKVMGKGGANLANIRKISGATVEISE-SKSYRG--DRVALISGTSEEKRA 619
Query: 184 ALELI 188
A LI
Sbjct: 620 AENLI 624
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
+ + +V G V+GKGG+ + + + SGA +++S S + DR+ +ISGT +E
Sbjct: 561 STLEMVVPANAVGKVMGKGGANLANIRKISGATVEISESKSY---RGDRVALISGTSEEK 617
Query: 95 LRAVDLV 101
A +L+
Sbjct: 618 RAAENLI 624
>gi|195439130|ref|XP_002067484.1| GK16164 [Drosophila willistoni]
gi|194163569|gb|EDW78470.1| GK16164 [Drosophila willistoni]
Length = 587
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 12/190 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 144
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E ++ ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 145 ACKRILEVMQQEANSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 199
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 200 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 255
Query: 216 FHGMPYGAVP 225
H M + P
Sbjct: 256 LHPMAMMSTP 265
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ + D +R VT+ GT + Q +
Sbjct: 307 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPIDADKPLDQQTERKVTIVGTPEGQWK 366
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A +I K+ E+ T V T
Sbjct: 367 AQYMIFEKMREEGFMCGTDDVRLT 390
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ + + T+R + I G
Sbjct: 302 QETTYL--YIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPIDADKPLDQQTERKVTIVG 359
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 360 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTIELLVASSQVGRIIGKGGQNVRELQR 416
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 417 VTGSVIKL 424
>gi|357437527|ref|XP_003589039.1| Far upstream element-binding protein [Medicago truncatula]
gi|355478087|gb|AES59290.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 30/207 (14%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N G +IGKGG TI Q QSGA+IQ++R + P + +R++ ++GT D I A
Sbjct: 115 KIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSDAIATA 174
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTK----------LRLIVPNSSCGSIIGKAGATIKSF 147
+KL+ E+ AE ++ G T+ + +PN+ G IIGK G TIKS
Sbjct: 175 -----EKLIKEVLAEAESGGNGLVTRRMTGQGGADEFSMKIPNNKVGLIIGKGGETIKSM 229
Query: 148 MDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLS-EDTLYSQT 201
+ A I++ L D S +R + + GT ++ A +L+ LS E+ L + +
Sbjct: 230 QATTGARIQVIPLHLPPGDTS----TERTLKIEGTSEQIESAKQLVDSILSGENRLRNPS 285
Query: 202 MTVPYTYAGVFFSGFHGMPYGAVPPPV 228
M+ G G+ P + PP
Sbjct: 286 MS-----GGYSQQGYQARPPSSWAPPA 307
>gi|157114471|ref|XP_001652287.1| igf2 mRNA binding protein, putative [Aedes aegypti]
gi|108877277|gb|EAT41502.1| AAEL006876-PA [Aedes aegypti]
Length = 541
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV++ + GA+IG+ GSTI S AR+ + R G+ ++ I I G +
Sbjct: 129 LRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNV--GSLEKAITIYGNPENCTS 186
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 187 ACKRILEVMQQEANNTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 241
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVPYTY- 208
+S + D + + L +R++T+ G++D R I KL + L Q++ P +
Sbjct: 242 VSSINDINSFNL-ERIITVKGSIDNMSRGESQISAKLRQSYENDLQALAPQSIMFPGLHP 300
Query: 209 --------AGVFFSGFHGMPYGAV-----PPPVPAVP 232
G+ F+G GM G PP VP P
Sbjct: 301 MAMMSTAGNGMGFTGRTGMYPGTSYPMYQPPTVPGAP 337
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFF 77
T P S ++ TY+ + N GA+IG GS I + SGA ++++ + +
Sbjct: 332 TVPGAPPGSSDVQETTYL--YIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPL 389
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
T+R + I GT + +A L+ +K+ E DDV + + ++VP++ G II
Sbjct: 390 EQQTERKVTIVGTPEAQWKAQYLIFEKMREEGFVSG-TDDV--RLTVEILVPSAQVGRII 446
Query: 138 GKAGATIKSFMDDSQAVIKI 157
GK G ++ + ++IK+
Sbjct: 447 GKGGQNVRELQRVTGSIIKL 466
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I++ + S A +KI+ L D +R VT+ GT + Q +
Sbjct: 349 LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGTPEAQWK 408
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A LI K+ E+ S T V T
Sbjct: 409 AQYLIFEKMREEGFVSGTDDVRLT 432
>gi|223947189|gb|ACN27678.1| unknown [Zea mays]
gi|223950255|gb|ACN29211.1| unknown [Zea mays]
gi|414868821|tpg|DAA47378.1| TPA: KH domain containing protein [Zea mays]
Length = 508
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 79/167 (47%), Gaps = 17/167 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------- 89
R LV GAVIG+ G I +S ARI++ E P +R +MIS
Sbjct: 109 FRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVL---EGPPAVPERAVMISAKDEPDTE 165
Query: 90 ---TIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIK 145
+D +LR + D L TE DQ T RL+VP S GS+IGK GATIK
Sbjct: 166 LPPAVDGLLRVHRRITDGLETET---DQPQRATVNTGPTRLLVPASQAGSLIGKQGATIK 222
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
S D S+ V++I +DR+V + G + +A+ELI L
Sbjct: 223 SIQDASKCVLRIVENVPPVALNDDRVVEIQGEPHDSHKAVELIASHL 269
>gi|401403726|ref|XP_003881550.1| putative KH domain-containing protein [Neospora caninum Liverpool]
gi|325115963|emb|CBZ51517.1| putative KH domain-containing protein [Neospora caninum Liverpool]
Length = 715
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 22/180 (12%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P Y++ L+SN LAG +IG G I + +GA+I LS +FPGTT+R++ GT
Sbjct: 66 PCYVKMLISNQLAGMIIGNTGQEIKHLKQITGAKIVLSPHGMYFPGTTERLVAAEGTERA 125
Query: 94 ILRAVDLVIDKL--LTELHAEDQ---ADDV----------------GTKTKLRLIVPNSS 132
+ + VD +ID++ L +L Q A+D+ ++ VP +
Sbjct: 126 VFQVVDWIIDRMDELAQLAPPSQPSSAEDLLRPTTSSLSSGSAGLQPRALACKICVPRAV 185
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
GS+IG+ G I+S ++A I IS L + +R+VT+ T + +R L +
Sbjct: 186 IGSLIGRKGGYIQSVRLATEANINISPLFVTADEACAERVVTVESTRKQSLRTAVFTLAR 245
>gi|241651548|ref|XP_002411283.1| conserved hypothetical protein [Ixodes scapularis]
gi|215503913|gb|EEC13407.1| conserved hypothetical protein [Ixodes scapularis]
Length = 610
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 14/191 (7%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P++ P +R LV + + GA+IG+ G TI QS AR+ + R G+ +++I I G
Sbjct: 192 PSDFP--LRILVLSDMVGAIIGRAGGTIRQITQQSRARVDVHRKEN--AGSLEKVITIYG 247
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ A +++ + E ++ + L+++ N+ G IIGK+G TIK M+
Sbjct: 248 NPENCSTACQKILEVMQQEASNTNRGE-----VPLKILAHNNLIGRIIGKSGNTIKRIME 302
Query: 150 DSQAVIKISRLDHSYYGLN-DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY 208
+ I +S L H LN +R++T+ G + RA +LI KL + P T
Sbjct: 303 QTDTKITVSSL-HDASTLNLERVITVKGKAEGVCRAEQLISAKLRQSYESDLAALAPQT- 360
Query: 209 AGVFFSGFHGM 219
+ F G H M
Sbjct: 361 --LMFPGLHPM 369
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 13/124 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARI---QLSRSHEFFPGTTDRIIMISGTIDE 93
+ + N GAVIG GGS+I D SGA I ++ R P I+ G
Sbjct: 442 VYLYIPNVAVGAVIGTGGSSIRDMIMLSGASIKVGEVCRDEPTLP------IVSGGVAVH 495
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A ++ +K+ E A Q + ++ + VP++ G IIGK G T++ ++A
Sbjct: 496 CFQAQGMIFNKVCYEGCAGSQDGTL----RVEIFVPSNQVGRIIGKGGQTVRELQRLTRA 551
Query: 154 VIKI 157
+IK+
Sbjct: 552 LIKL 555
>gi|414868822|tpg|DAA47379.1| TPA: hypothetical protein ZEAMMB73_380288 [Zea mays]
Length = 499
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 79/167 (47%), Gaps = 17/167 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------- 89
R LV GAVIG+ G I +S ARI++ E P +R +MIS
Sbjct: 109 FRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVL---EGPPAVPERAVMISAKDEPDTE 165
Query: 90 ---TIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIK 145
+D +LR + D L TE DQ T RL+VP S GS+IGK GATIK
Sbjct: 166 LPPAVDGLLRVHRRITDGLETET---DQPQRATVNTGPTRLLVPASQAGSLIGKQGATIK 222
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
S D S+ V++I +DR+V + G + +A+ELI L
Sbjct: 223 SIQDASKCVLRIVENVPPVALNDDRVVEIQGEPHDSHKAVELIASHL 269
>gi|389748653|gb|EIM89830.1| hypothetical protein STEHIDRAFT_118925 [Stereum hirsutum FP-91666
SS1]
Length = 304
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 82/148 (55%), Gaps = 16/148 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ A +IGK GS +N+ + +SGAR+ +S E PG +RI+ +SG +D + +
Sbjct: 1 MRCLIVTQDASIIIGKAGSHVNEIREKSGARVMVS---ESIPGNPERILNVSGPLDAVSK 57
Query: 97 AVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
A L++ ++ D+ DV G++ ++ ++PNS GS+IGK G+ IK D S
Sbjct: 58 AFGLIVRRI------NDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDAS 111
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLD 179
A + S + G +R++++ G D
Sbjct: 112 GARLNAS--EGMLPGSTERVLSVAGVAD 137
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 58/221 (26%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S P + I+F++ N G+VIGK GS I + Q SGAR L+ S PG+T+R++ +
Sbjct: 75 SVPGSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGAR--LNASEGMLPGSTERVLSV 132
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK------------------------ 123
+G D I A I +L E A+++ GT
Sbjct: 133 AGVADAIHIAT-YYIGNILIE--AQERMPSAGTAMSSYRPSNRSTTRSTPYVGSSYVPGY 189
Query: 124 ---------------------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
++ +PN G IIGK G+ I S + IKI
Sbjct: 190 SNPYVQTAPPAPGNPPPQIQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGA 249
Query: 163 SYYGLN--------DRLVTLTGTLDEQMRALELILLKLSED 195
G+N +RLV +TG A++L+ +L ++
Sbjct: 250 GAGGVNPAPAPGEGERLVVITGPPANIQMAVQLLYHRLEQE 290
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF--------FPGTTDRIIMISG 89
+ + N L G +IGKGGS IN+ + S ++I++ PG +R+++I+G
Sbjct: 212 QIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAGAGGVNPAPAPGEGERLVVITG 271
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADD 117
I AV L+ +L E + +A
Sbjct: 272 PPANIQMAVQLLYHRLEQEKQKQLRAQQ 299
>gi|224001814|ref|XP_002290579.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974001|gb|EED92331.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 649
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G VIGKGG I D Q++SG RI + ++ P RII GT + I A L+ +L
Sbjct: 245 GRVIGKGGEMIRDLQARSGCRIDVDQN---VPEGAPRIITYRGTRNAIDFAKQLI--SIL 299
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
H ++ +G K ++VP++ G IIG+ G I+ S A I++ DHS G
Sbjct: 300 CTEHGKEAELPLGQAMKKLVLVPSTVIGKIIGRGGEMIRELQSKSMAKIQV---DHSGAG 356
Query: 167 LN--DRLVTLTGTLDEQMRALELILL 190
++ R +T+TGT ++A E+IL
Sbjct: 357 MDSQQRQITVTGTTQAVIKAEEMILF 382
>gi|384490263|gb|EIE81485.1| hypothetical protein RO3G_06190 [Rhizopus delemar RA 99-880]
Length = 426
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 25/205 (12%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV AG +IGKGG +++ + S AR+ +S + PG +RI+ + G + + +
Sbjct: 81 LRSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNIS---DIVPGAAERILTVVGPVSAVAK 137
Query: 97 AVDLVIDKLLTE-LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A LV +K++ E AED + +++++ + GSIIGK+G+ I+S + S A
Sbjct: 138 AYALVAEKIIEENTLAEDNKGPIQQDVTIKILILANRMGSIIGKSGSVIRSIQETSGA-- 195
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
K+S + +R+VT+ GT D A+E + K+ D L Q
Sbjct: 196 KVSAQEEPLPLSTERVVTIHGTPD----AIEQAVKKIG-DILVDQP-------------N 237
Query: 216 FHGMPYGAVPPPVPAVPHNTAAHYG 240
HG Y P A PH +++++G
Sbjct: 238 HHGN-YMLYKPIAGAAPHTSSSNHG 261
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P ++ I+ L+ G++IGK GS I Q SGA++ S E P +T+R++ I G
Sbjct: 159 PIQQDVTIKILILANRMGSIIGKSGSVIRSIQETSGAKV--SAQEEPLPLSTERVVTIHG 216
Query: 90 TIDEILRAVDLVIDKLLTE 108
T D I +AV + D L+ +
Sbjct: 217 TPDAIEQAVKKIGDILVDQ 235
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +PN G IIGK G I S + IKI+ + +RL+T+TGT + A
Sbjct: 352 QIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIADPSTDSH---ERLITITGTPESNQMA 408
Query: 185 LELILLKLSED 195
L L+ +L +
Sbjct: 409 LYLLYSRLEAE 419
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS----RSHEFFPGTTDRIIMISGTIDE 93
+ + N + G +IGKGG IN+ + SG+ I+++ SHE R+I I+GT +
Sbjct: 352 QIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIADPSTDSHE-------RLITITGTPES 404
Query: 94 ILRAVDLVIDKLLTE 108
A+ L+ +L E
Sbjct: 405 NQMALYLLYSRLEAE 419
>gi|116180584|ref|XP_001220141.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185217|gb|EAQ92685.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 485
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+P A +IGKGG ++ + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 126 HVRAVISSPEAATIIGKGGENVSKIRQMSGAKCTVS---DYQKGAVERILTVSGIVDAVA 182
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E E + T LRL++P+ GSIIGK GA IK + S A +
Sbjct: 183 KAFGLIIRTLNNEPLGEPSSQHSKT-YPLRLLIPHILIGSIIGKGGARIKEIQEASGARL 241
Query: 156 KIS 158
S
Sbjct: 242 NAS 244
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 189 IRTLNNEPLGEPSSQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDS-- 246
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 247 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 281
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 414 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITGTEECNRM 469
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 470 ALYMLYSRLESE 481
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 410 PLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEEC 466
Query: 94 ILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 467 NRMALYMLYSRLESEKH 483
>gi|158293685|ref|XP_557579.3| AGAP004942-PA [Anopheles gambiae str. PEST]
gi|157016566|gb|EAL40201.3| AGAP004942-PA [Anopheles gambiae str. PEST]
Length = 382
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 20/188 (10%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
+LS DP T IR ++ G++IGK G + F+ +SGA+I +S +RI
Sbjct: 13 NLSDDPAVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDCS-----CPERI 66
Query: 85 IMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK----LRLIVPNSSCGSIIGKA 140
+ +SG+ I +A L+ K E D+ T+ K +RLIVP S CGS+IGK
Sbjct: 67 VTVSGSRSAIYKAFTLITKKF--EEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKG 124
Query: 141 GATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY 198
G+ IK + + I+++ L +S +R VTL+G+ + + + I + E
Sbjct: 125 GSKIKEIREITGCSIQVASEMLPNS----TERAVTLSGSAEAITQCIYHICCVMLESP-- 178
Query: 199 SQTMTVPY 206
+ T+PY
Sbjct: 179 PKGATIPY 186
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 15 HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSH 74
+ R+ APV+S S + T V N L G +IGKGG+ I + + SGA I++S
Sbjct: 275 NNNRNVAPVQSQSHEMT---------VPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCE 325
Query: 75 EFFPGTTDRIIMISGTIDEILRAVDLV 101
E G TDR I I+G D + A L+
Sbjct: 326 ERDSGNTDRTITITGNPDSVALAQYLI 352
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 289 EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALA 348
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
LI +++S +T AG+ G+H
Sbjct: 349 QYLINMRISMET------------AGMPIPGYH 369
>gi|327267261|ref|XP_003218421.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Anolis carolinensis]
Length = 576
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 106/251 (42%), Gaps = 29/251 (11%)
Query: 7 SYVPSPDV-------------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKG 53
SY+P +V H R P SS P + +R LV GA+IGK
Sbjct: 152 SYIPDDEVSSPQPPQRSRRGGHSSREQGPSPGGSSQPKQLDFPLRILVPTQFVGAIIGKE 211
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G TI + Q+ +++ + R G ++ I I T + A +++D + E
Sbjct: 212 GLTIKNLTKQTQSKVDIHRKEN--AGAAEKPITIHATPEGCSEACRMILDIMQKEAEETK 269
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
A+++ L+++ NS G +IGK G +K D+ I IS L +R +T
Sbjct: 270 SAEEI----PLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERTIT 325
Query: 174 LTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYG-A 223
+ G+++ A I+ KL E T+ Q +P G+F +G +P G
Sbjct: 326 VKGSIEACSNAEAEIMNKLREAYENDIVTVNQQANLIPGLNLNALGIFSTGLSMLPSGTG 385
Query: 224 VPPPVPAVPHN 234
V P + P+N
Sbjct: 386 VRRPAVSTPYN 396
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 47/207 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + +G +I +S + +R I + G+I+
Sbjct: 276 LKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERTITVKGSIEACSN 335
Query: 97 AVDLVIDKLLTELHAED------QADDV--------------------GTKTK------- 123
A +++KL E + D QA+ + GT +
Sbjct: 336 AEAEIMNKL-REAYENDIVTVNQQANLIPGLNLNALGIFSTGLSMLPSGTGVRRPAVSTP 394
Query: 124 -----------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
+ L +P + G+IIGK G IK + A IKI+ + ++R+V
Sbjct: 395 YNPFAVPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPE--ASERMV 452
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYS 199
+TG + Q +A I KL E+ ++
Sbjct: 453 IITGPPEAQFKAQGRIFGKLKEENFFN 479
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G I +GA I+++ + P ++R+++I+G + +
Sbjct: 406 VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PEASERMVIITGPPEAQFK 463
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + K + + VP+S+ G +IGK G T+ + + A +
Sbjct: 464 AQGRIFGKLKEENFFNPKEE---VKLEAHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVI 520
Query: 157 ISR 159
+ R
Sbjct: 521 VPR 523
>gi|115927400|ref|XP_782196.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Strongylocentrotus purpuratus]
Length = 657
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 84/158 (53%), Gaps = 7/158 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + GA+IGKGG+ I ++G ++ + R G++++ + I G ++
Sbjct: 203 VRILVRSEFVGAIIGKGGNNIRAITKETGCKVDIHRKDNI--GSSEKAVTICGEPQQVTE 260
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+ +++ ++ E E D L+++ N+ G +IGK+G++I S M+DS+A +
Sbjct: 261 TIKKIVEVMIKESSEESHTD-----MPLKVLAHNALVGRLIGKSGSSINSIMEDSKAKVT 315
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
+S + +R VT+ GT ++ + A LI KL +
Sbjct: 316 VSLIQDLTVFNPERTVTIYGTPEQCIAAEALISKKLRK 353
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
SS+ + ++ L N L G +IGK GS+IN S A++ +S + +R +
Sbjct: 273 SSEESHTDMPLKVLAHNALVGRLIGKSGSSINSIMEDSKAKVTVSLIQDLTVFNPERTVT 332
Query: 87 ISGTIDEILRAVDLVIDKL 105
I GT ++ + A L+ KL
Sbjct: 333 IYGTPEQCIAAEALISKKL 351
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
++ +P+E TY+ V GA+IG GG I + S A I+++ + + +R +
Sbjct: 434 MNQEPSET-TYL--FVPREAVGALIGVGGKNIRNTARASNATIRIAPAGN--EDSNERCV 488
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-KTKLR--LIVPNSSCGSIIGKAGA 142
I GT + RA + D++ +E +G+ + LR + VP+ G IIGK G
Sbjct: 489 KIIGTPESQWRAQFYIYDRIRSE-------GILGSGEVHLRSEIAVPSQLVGRIIGKRGQ 541
Query: 143 TIKSFMDDSQAVIKISR 159
++ + A +++ R
Sbjct: 542 RVRELQRVTGARVEVPR 558
>gi|402086578|gb|EJT81476.1| Poly(rC)-binding protein 3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 486
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 127 HIRAVISSPEAATVIGKGGENVSKIRQLSGAKCTVS---DYQKGAVERILTVSGIVDAVA 183
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E ++ A +KT LRL++P+ GSIIGK GA IK + S A
Sbjct: 184 KAFGLIIRTLNNEPLSD--ASSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGAR 241
Query: 155 IKIS 158
+ S
Sbjct: 242 LNAS 245
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ + L G++IGKGG+ I + Q SGAR+ S S P +++R +++ G D +
Sbjct: 211 LRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDS--CLPLSSERSLVVMGVADAVHI 268
Query: 97 AVDLVIDKLLTELH 110
A V LL +L+
Sbjct: 269 ATYYVGSTLLEQLN 282
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIRFL-VSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
P VHG P+ S P + + + + N + GA+IGKGG+ IN+ + SG+ I++
Sbjct: 388 PQVHGAPHQQPMHSQMPGPGGAQSLTQQIYIPNDMVGAIIGKGGTKINEIRQISGSVIKI 447
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 448 NEPQD---NSNERLVTITGTEECNRMALYMLYSRLESEKH 484
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 415 QIYIPNDMVGAIIGKGGTKINEIRQISGSVIKINEPQDNS----NERLVTITGTEECNRM 470
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 471 ALYMLYSRLESE 482
>gi|221484798|gb|EEE23092.1| KH domain-containing protein, putative [Toxoplasma gondii GT1]
Length = 715
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
Y++ L+SN LAG +IG G I + +GA+I LS +FPGTT+R++ GT +
Sbjct: 66 YVKMLISNQLAGMIIGNTGQEIKHLKQVTGAKIVLSPHGMYFPGTTERLVAAEGTERAVF 125
Query: 96 RAVDLVIDKL--LTELHAEDQADDV---------------GTKTKLRLIVPNSSCGSIIG 138
+ VD +ID++ L ++ ++ +D+ ++ VP + GS+IG
Sbjct: 126 QVVDWIIDRMDELAQMPSQPSTEDLLRSTTSLSSGSGGSLSRTLACKICVPRAVIGSLIG 185
Query: 139 KAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
K G I+S ++A I IS L + +R+VT+ + +R L +
Sbjct: 186 KKGGYIQSVRLATEANINISPLFVTADEACAERVVTVESPRKQSLRTAVFTLAR 239
>gi|195481990|ref|XP_002101863.1| GE15370 [Drosophila yakuba]
gi|194189387|gb|EDX02971.1| GE15370 [Drosophila yakuba]
Length = 566
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 81 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 138
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 139 ACKRILEVMQQEALSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 193
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 194 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 249
Query: 216 FHGMPYGAVP 225
H M + P
Sbjct: 250 LHPMAMMSTP 259
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ L D +R VT+ GT + Q +
Sbjct: 301 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 360
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A +I K+ E+ T V T
Sbjct: 361 AQYMIFEKMREEGFMCGTDDVRLT 384
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ + + T+R + I G
Sbjct: 296 QETTYL--YIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 353
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 354 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 410
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 411 VTGSVIKL 418
>gi|328768620|gb|EGF78666.1| hypothetical protein BATDEDRAFT_26534 [Batrachochytrium
dendrobatidis JAM81]
Length = 493
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R+TAP S + +P +R L+S AG VIGKGGS + + + +G+R+ +S
Sbjct: 106 RTTAPSDSNAETRESRPIRMRSLISPKEAGVVIGKGGSHVVEIRDTTGSRVTVSGQ---V 162
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
PG DR++ + G + RA ++ KL + H D LRL+VP S G II
Sbjct: 163 PGVFDRVVTVLGAAEANGRAYMMISTKLAGQQHDNQNTDPQSRTVTLRLLVPQSRIGYII 222
Query: 138 GKAGATIKSFMD 149
G+ G IK +
Sbjct: 223 GRQGVRIKEIQE 234
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + + GA+IGKGG IN+ + SG ++++ + PG R+I ++GT D + +A
Sbjct: 419 QITIPDECVGAIIGKGGCKINEVRISSGCQVKIG---DPQPGQRRRVITLTGTADAVSKA 475
Query: 98 VDLVIDKLLTELHAEDQ 114
+++ ++ E +D+
Sbjct: 476 QFMLLARVEQESQNKDR 492
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 115 ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
A D TK + ++ +P+ G+IIGK G I S +KI G R++TL
Sbjct: 410 ASDGVTKVE-QITIPDECVGAIIGKGGCKINEVRISSGCQVKIG---DPQPGQRRRVITL 465
Query: 175 TGTLDEQMRALELILLKLSEDT 196
TGT D +A ++L ++ +++
Sbjct: 466 TGTADAVSKAQFMLLARVEQES 487
>gi|221504974|gb|EEE30639.1| KH domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 715
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
Y++ L+SN LAG +IG G I + +GA+I LS +FPGTT+R++ GT +
Sbjct: 66 YVKMLISNQLAGMIIGNTGQEIKHLKQVTGAKIVLSPHGMYFPGTTERLVAAEGTERAVF 125
Query: 96 RAVDLVIDKL--LTELHAEDQADDV---------------GTKTKLRLIVPNSSCGSIIG 138
+ VD +ID++ L ++ ++ +D+ ++ VP + GS+IG
Sbjct: 126 QVVDWIIDRMDELAQMPSQPSTEDLLRSTTSLSSGSGGSLSRTLACKICVPRAVIGSLIG 185
Query: 139 KAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
K G I+S ++A I IS L + +R+VT+ + +R L +
Sbjct: 186 KKGGYIQSVRLATEANINISPLFVTADEACAERVVTVESPRKQSLRTAVFTLAR 239
>gi|270007202|gb|EFA03650.1| hypothetical protein TcasGA2_TC013744 [Tribolium castaneum]
Length = 710
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 110/255 (43%), Gaps = 21/255 (8%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP L + +R LV + + GA+IG+ GSTI Q+ AR+ + R G+
Sbjct: 274 APFGGLPGQSRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNV--GS 331
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
++ I I G + A +++ + E + ++ + L+++ N+ G IIGK
Sbjct: 332 LEKAITIYGNPENCTNACKRILEVMQQEANNTNKGEIC-----LKILAHNNLIGRIIGKG 386
Query: 141 GATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
G TIK M ++ I +S + D + + L +R++T+ G +D RA I KL +
Sbjct: 387 GNTIKRIMQETDTKITVSSINDINSFNL-ERIITVKGAIDNMSRAEAQISAKLRQSYEND 445
Query: 200 QTMTVPYTYAGVFFSGFH--------GMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNN 251
P T + F G H G+ YG+ P+ G GG Q
Sbjct: 446 LQAMAPQT---MMFPGLHPMAMMATAGIGYGSRGLYTGQAPYPGMYPAGAAQGGGDSQET 502
Query: 252 KVLLPWPLNPVGMLL 266
L P N VG ++
Sbjct: 503 TYLY-IPNNAVGAII 516
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT--DRIIMIS 88
+++ TY+ + N GA+IG GS I + SGA ++++ E P T +R + I
Sbjct: 499 SQETTYL--YIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIV 556
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G+ + +A L+ +K+ E +DDV + + ++VP+S G IIGK G ++
Sbjct: 557 GSPEAQWKAQYLIFEKMREEGFVAG-SDDV--RLTVEIMVPSSQVGRIIGKGGQNVRELQ 613
Query: 149 DDSQAVIKI 157
+ +VIK+
Sbjct: 614 RVTGSVIKL 622
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHS--YYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I++ + S A +KI+ +D + N+R VT+ G+ + Q +
Sbjct: 505 LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVGSPEAQWK 564
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A LI K+ E+ + + V T
Sbjct: 565 AQYLIFEKMREEGFVAGSDDVRLT 588
>gi|291234615|ref|XP_002737239.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1-like
[Saccoglossus kowalevskii]
Length = 655
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 17/210 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IGK G+ I Q+ A++ + RS E ++ I I GT +
Sbjct: 230 VRLLVPSSMVGAIIGKKGANIRLITQQTKAKVDILRSKEN-ASALEKAINIYGTPLQCSN 288
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
V+ +++ ++ E +++ + + L+L+ NS G +IGK G T+ M++S +
Sbjct: 289 TVEQIMETMVKE----NESANPSIEIPLKLLAHNSLVGRLIGKGGTTLNKIMEESNTKVS 344
Query: 157 ISRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVPYTYA 209
IS L + Y + +R +T+ G+L+++ +A E++ KL + +L Q P
Sbjct: 345 ISNLQELTIYNM-ERTITIKGSLNDECKAEEMVSEKLRDSFRADMASLTQQYNLFPGLNH 403
Query: 210 GVFFSGFHGMPYGAVPPPVPAVPHNTAAHY 239
FSG P GA+ HN+A Y
Sbjct: 404 ASVFSGLGNSP-GAI---FNVAMHNSAVLY 429
>gi|195350752|ref|XP_002041902.1| GM11285 [Drosophila sechellia]
gi|194123707|gb|EDW45750.1| GM11285 [Drosophila sechellia]
Length = 566
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 80 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 137
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 138 ACKRILEVMQQEAISTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 192
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 193 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 248
Query: 216 FHGMPYGAVP 225
H M + P
Sbjct: 249 LHPMAMMSTP 258
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ L D +R VT+ GT + Q +
Sbjct: 300 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 359
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A +I K+ E+ T V T
Sbjct: 360 AQYMIFEKMREEGFMCGTDDVRLT 383
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ + + T+R + I G
Sbjct: 295 QETTYL--YIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 352
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 353 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 409
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 410 VTGSVIKL 417
>gi|194762728|ref|XP_001963486.1| GF20264 [Drosophila ananassae]
gi|190629145|gb|EDV44562.1| GF20264 [Drosophila ananassae]
Length = 590
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSVEKSITIYGNPENCTN 144
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 145 ACKRILEVMQQEALSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 199
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 200 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 255
Query: 216 FHGMPYGAVP 225
H M + P
Sbjct: 256 LHPMAMMSTP 265
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ L D +R VT+ GT + Q +
Sbjct: 307 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 366
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A +I K+ E+ T V T
Sbjct: 367 AQYMIFEKMREEGFMCGTDDVRLT 390
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISGTIDEILRAV 98
+ N GA+IG GS I S A ++++ + + T+R + I GT + +A
Sbjct: 309 IPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQ 368
Query: 99 DLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
++ +K+ E DDV + + L+V +S G IIGK G ++ + +VIK+
Sbjct: 369 YMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL 424
>gi|393220213|gb|EJD05699.1| hypothetical protein FOMMEDRAFT_79532 [Fomitiporia mediterranea
MF3/22]
Length = 281
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 16/149 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+ A +IG+ G +N+ + +SGAR+ +S E PG +RI+ +SG +D +
Sbjct: 3 HMRCLIVTQDASIIIGRAGKHVNEIREKSGARVVVS---ESIPGNPERILNVSGPLDAVS 59
Query: 96 RAVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+A L++ ++ D+ DV G++ ++ ++PNS GSIIGK GA IK D
Sbjct: 60 KAFGLIVRRI------NDEPFDVPSVPGSRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDA 113
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
S A + S + G +R++++ G D
Sbjct: 114 SGARLNAS--EGMLPGSTERVLSVAGVAD 140
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 26/185 (14%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S P + I+F++ N G++IGK G+ I + Q SGAR L+ S PG+T+R++ +
Sbjct: 78 SVPGSRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDASGAR--LNASEGMLPGSTERVLSV 135
Query: 88 SGTIDEILRAV----DLVI---DKLLTELHAEDQADDVGTKTKL---------RLIVPNS 131
+G D I A +++I +++ + ++ + + + L ++ +PN
Sbjct: 136 AGVADAIHIATYYVGNILIECQERMPSSTNSSYRPSNRAPRPPLSGGAQSYTQQIYIPND 195
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL--------NDRLVTLTGTLDEQMR 183
G IIGK G+ I S + IKI + G+ N+RLV +TG
Sbjct: 196 LVGCIIGKGGSKINEIRHMSASQIKIMEPGVTPPGMSGPAGGTENERLVIITGQPHNIQM 255
Query: 184 ALELI 188
A++L+
Sbjct: 256 AVQLL 260
>gi|326433287|gb|EGD78857.1| hypothetical protein PTSG_01835 [Salpingoeca sp. ATCC 50818]
Length = 507
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 38/205 (18%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P S + D TE+ +I+FL +N G +IG+GG+TI D Q + + I++S + E +PGT
Sbjct: 48 PPPSAARDDTEQ-MHIKFLATNGQCGMLIGRGGATIKDLQDSTHSYIKISHNSELYPGTA 106
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT------------------- 122
DR++ + +L A+ +++ ++ Q G+ T
Sbjct: 107 DRLVSVQARPQHLLNALLAILE--CANARSDPQQQGAGSTTPGTPQNSNHQQAQDQAQDQ 164
Query: 123 -------------KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
++L++P + G I+G+ G TI++ + A I +S+ L +
Sbjct: 165 VQQQQQQQGPRSISVKLVIPVVAAGLILGRGGETIRTMQTECDAYIHMSQRHEVPPALQE 224
Query: 170 RLVTLTGTLDEQM--RALELILLKL 192
R+VT+ T D M RA+ I+ L
Sbjct: 225 RIVTINCT-DGGMPVRAITRIMQTL 248
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 15/193 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + AGAVIGKGG +I +++ A + + S T +RI+ I ID ++R
Sbjct: 40 LRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQ-----TPERIVTIVAEIDNVIR 94
Query: 97 AVDLVIDKLLTELHAEDQADDVGT---KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
V+ +I +L L D +DD G+ +++LRL+V S G+IIG+ G IK +++
Sbjct: 95 CVNEIIPRLDECLKTRD-SDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELREETST 153
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
+K+ +R++ + G ++ + + LI+ L E + + Y +F+
Sbjct: 154 QLKV--YSQCCPQSTERVIQIIGVPEKIIACVILIINMLKEIPIKGPSR----PYESMFY 207
Query: 214 SGFHGMPYGAVPP 226
YG PP
Sbjct: 208 DPNFVHEYGGFPP 220
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K +LRL+VP+ G++IGK G +IK + A + I +R+VT+ +D
Sbjct: 37 KYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQTP-----ERIVTIVAEIDN 91
Query: 181 QMRALELILLKLSE 194
+R + I+ +L E
Sbjct: 92 VIRCVNEIIPRLDE 105
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N L G +IGKGG IN + +SGA I + ++RII ISG+ +I A L
Sbjct: 275 IPNELGGTIIGKGGERINRIREESGAHIVVEPQQP----NSERIITISGSHAQIQTAQYL 330
Query: 101 V 101
+
Sbjct: 331 L 331
>gi|413917022|gb|AFW56954.1| hypothetical protein ZEAMMB73_179405 [Zea mays]
Length = 632
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 7/198 (3%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R L G VIG+GG+TI + + +SGARI + + + II T D A
Sbjct: 316 RVLCPGGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITIISTESTDDVKSAA 375
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
V+ V LL + D DD + LRL+VPN G +IG+ G+ + ++A I I
Sbjct: 376 VEAV---LLLQAKINDSEDD---RMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILI 429
Query: 158 SRLDHSYYG-LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGF 216
S+ D +D LV ++G D+ AL I+L+L E L + G
Sbjct: 430 SKGDKPRRASSSDELVEVSGEADKLRDALVQIILRLREAVLKESVESQNSDRDGQLTVAA 489
Query: 217 HGMPYGAVPPPVPAVPHN 234
YG+ P +PHN
Sbjct: 490 SDSLYGSSLPLPALLPHN 507
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 28/172 (16%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI---------- 87
R L + L G+VIGK G+ IN + Q+ A++++ + +PG R+I++
Sbjct: 44 RILCPDSLIGSVIGKHGNVINAIRHQTSAKVKVV---DPYPGADKRVILVYCYVKHRDLD 100
Query: 88 ---------SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
D +LR + ++D L T LH + D + + ++VP S ++IG
Sbjct: 101 AEGDDNEPVCAAQDALLRVHNAIVDALQT-LHKNHKDSDKKSTEEANILVPASQASNVIG 159
Query: 139 KAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTGTLDEQMRAL 185
K+GA IK S+A IK+S D HS D V +TG + +AL
Sbjct: 160 KSGAVIKHLRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGAEAVKKAL 211
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE-FFPGTTDRIIMISGTIDEIL 95
+R LV N + G +IG+GGS +ND + ++ A I +S+ + ++D ++ +SG D++
Sbjct: 396 LRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEVSGEADKLR 455
Query: 96 RAVDLVIDKL 105
A+ +I +L
Sbjct: 456 DALVQIILRL 465
>gi|194889982|ref|XP_001977205.1| GG18899 [Drosophila erecta]
gi|190648854|gb|EDV46132.1| GG18899 [Drosophila erecta]
Length = 568
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 81 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 138
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 139 ACKRILEVMQQEALSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 193
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 194 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 249
Query: 216 FHGMPYGAVP 225
H M + P
Sbjct: 250 LHPMAMMSTP 259
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ L D +R VT+ GT + Q +
Sbjct: 301 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 360
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A +I K+ E+ T V T
Sbjct: 361 AQFMIFEKMREEGFMCGTDDVRLT 384
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ + + T+R + I G
Sbjct: 296 QETTYL--YIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 353
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 354 TPEGQWKAQFMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 410
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 411 VTGSVIKL 418
>gi|17530887|ref|NP_511111.1| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|24641108|ref|NP_727456.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|24641110|ref|NP_727457.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|7533029|gb|AAF63331.1|AF241237_1 IGF-II mRNA-binding protein [Drosophila melanogaster]
gi|17862978|gb|AAL39966.1| SD07045p [Drosophila melanogaster]
gi|22832057|gb|AAF47958.2| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|22832058|gb|AAN09274.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|22832059|gb|AAN09275.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|220947510|gb|ACL86298.1| Imp-PA [synthetic construct]
gi|220956906|gb|ACL90996.1| Imp-PA [synthetic construct]
Length = 566
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 80 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 137
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 138 ACKRILEVMQQEAISTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 192
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 193 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 248
Query: 216 FHGMPYGAVP 225
H M + P
Sbjct: 249 LHPMAMMSTP 258
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ L D +R VT+ GT + Q +
Sbjct: 300 LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 359
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A +I K+ E+ T V T
Sbjct: 360 AQYMIFEKMREEGFMCGTDDVRLT 383
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ + + T+R + I G
Sbjct: 295 QETTYL--YIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 352
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 353 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 409
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 410 VTGSVIKL 417
>gi|302414660|ref|XP_003005162.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
gi|261356231|gb|EEY18659.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
Length = 478
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG +++ + SGA+ +S ++ G +RI+ +SG +D
Sbjct: 116 HIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTVS---DYQKGAVERILTVSGVVDASA 172
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E D+ +KT LRL++P+ GSIIGK GA I+ + S A
Sbjct: 173 KAFGLIIRTLNNE--PLDEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR 230
Query: 155 IKIS 158
+ S
Sbjct: 231 LNAS 234
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P ++P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 179 IRTLNNEPLDEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS-- 236
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 237 CLPMSTERSLVVMGVADAVHIATYYVGSTLLEQLN 271
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 406 QIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITGTDETNRM 461
Query: 184 ALELILLKL 192
AL ++ +L
Sbjct: 462 ALYMLYSRL 470
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT D
Sbjct: 401 QPLTQQIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGT-D 456
Query: 93 EILR 96
E R
Sbjct: 457 ETNR 460
>gi|237843499|ref|XP_002371047.1| KH domain-containing protein [Toxoplasma gondii ME49]
gi|211968711|gb|EEB03907.1| KH domain-containing protein [Toxoplasma gondii ME49]
Length = 715
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
Y++ L+SN LAG +IG G I + +GA+I LS +FPGTT+R++ GT +
Sbjct: 66 YVKMLISNQLAGMIIGNTGQEIKHLKQVTGAKIVLSPHGMYFPGTTERLVAAEGTERAVF 125
Query: 96 RAVDLVIDKL--LTELHAEDQADDV---------------GTKTKLRLIVPNSSCGSIIG 138
+ VD +ID++ L ++ ++ +D+ ++ VP + GS+IG
Sbjct: 126 QVVDWIIDRMDELAQMPSQPSTEDLLRSTTSLSSGSGGSLSRTLACKICVPRAVIGSLIG 185
Query: 139 KAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
K G I+S ++A I IS L + +R+VT+ + +R L +
Sbjct: 186 KKGGYIQSVRLATEANINISPLFVTADEACAERVVTVESPRKQSLRTAVFTLAR 239
>gi|332025247|gb|EGI65421.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Acromyrmex
echinatior]
Length = 568
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI + AR+ + R G+ ++ I I G +
Sbjct: 123 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNV--GSLEKAITIYGNPENCTN 180
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK G TIK M D+ I
Sbjct: 181 ACKKILEVMQQEANNTNKGE-----ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKIT 235
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---- 205
+S + D + + L +R++T+ G++D +A +I KL + + Q+M P
Sbjct: 236 VSSINDINSFNL-ERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHP 294
Query: 206 ---YTYAGVFFSGFHGMPYGAVPPPVP 229
+ AG+ +S YG+ P P P
Sbjct: 295 MAMMSTAGMGYSSRGPGLYGSGPAPYP 321
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG--TTDRIIMIS 88
T++ T++ + N GA+IG GS I + SGA ++++ + P T+R + I
Sbjct: 337 TQETTFL--YIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIV 394
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G+ + +A L+ +K+ E + D + + ++VP++ G IIGK G ++
Sbjct: 395 GSPESQWKAQYLIFEKMREEGYVAGTED---VRLTIEILVPSTQVGRIIGKGGQNVRELQ 451
Query: 149 DDSQAVIKIS 158
+ +VIK+S
Sbjct: 452 RVTGSVIKLS 461
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ L D +R VT+ G+ + Q +
Sbjct: 343 LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWK 402
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A LI K+ E+ + T V T
Sbjct: 403 AQYLIFEKMREEGYVAGTEDVRLT 426
>gi|196001809|ref|XP_002110772.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
gi|190586723|gb|EDV26776.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
Length = 560
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 11/186 (5%)
Query: 24 KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
++L+ P+ +R LV + GA+IG+ G+TI Q+ AR+ + R G+ ++
Sbjct: 127 RNLTRTPSHCEFPLRILVPTEMVGAIIGREGNTIRSITQQTQARVDVHRRESL--GSAEK 184
Query: 84 IIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK-------LRLIVPNSSCGSI 136
I I GT D A + + +EL + + + + L+++ N+ G +
Sbjct: 185 AITILGTPDSCTSAALQIAKIMQSELLSTNPQLKLKVEQGHPIPNIPLKILAHNNLIGRL 244
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
IGK G IKS M+ + + I IS+L+ G ++R +T+ GT++ RA L+ KL +
Sbjct: 245 IGKNGNVIKSIMNQTNSKITISKLEDLKSGYSERTITVIGTVENSSRAEALLSAKLR--S 302
Query: 197 LYSQTM 202
Y Q M
Sbjct: 303 YYKQDM 308
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 49 VIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
VIG G+ + + SGA +QL +S + G +R ++++G +A + +K+
Sbjct: 397 VIGARGNQLPALEQISGASLQLVQS--MYSGANERKVVVNGNASSQWKAQLSIFNKVGEG 454
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
L ++++ +T++ +VP+ G IIGK G+T++ + A+I+I R
Sbjct: 455 LTP---SEELSLRTEI--LVPSPLVGRIIGKGGSTVRQLQSQTGAMIEIPR 500
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
LV +PL G +IGKGGST+ QSQ+GA I++ R
Sbjct: 467 ILVPSPLVGRIIGKGGSTVRQLQSQTGAMIEIPR 500
>gi|221114013|ref|XP_002155770.1| PREDICTED: poly(rC)-binding protein 3-like [Hydra magnipapillata]
Length = 313
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 13/162 (8%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
E+ + F++ + AG +IGK G I + +SGA I +S S +RI+ I GT
Sbjct: 2 AEEKLELHFIILSQDAGGIIGKEGRNIRQMRDESGANINVSGST-----GVERILNIKGT 56
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
E+ AV +V +KL L + ++ LRL+VPNS CG +IGK G IK +
Sbjct: 57 SSEVKSAVRMVAEKLQEILSGSN--NEYVPPVTLRLLVPNSQCGPLIGKGGQRIKEIREA 114
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
S A I I + G ++R VTL G+ + AL L + K+
Sbjct: 115 SGATITIP--SETLPGSSERSVTLAGSPE----ALGLCIAKI 150
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 35/153 (22%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R LV N G +IGKGG I + + SGA I + E PG+++R + ++G+ +
Sbjct: 85 PVTLRLLVPNSQCGPLIGKGGQRIKEIREASGATITI--PSETLPGSSERSVTLAGSPE- 141
Query: 94 ILRAVDLVIDKL-----------------------------LTELHAEDQADDVGTKTKL 124
A+ L I K+ L+ + + + +++
Sbjct: 142 ---ALGLCIAKIWDIFEEFPARQNNVQYFPNMYPRSMGPHQLSVMSGQLSFTGLSRRSEQ 198
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
++ +P++ GS+IGK G I S A + +
Sbjct: 199 KVRLPSNVIGSLIGKGGCHINEIRQFSGATVHV 231
>gi|346979418|gb|EGY22870.1| Poly(rC)-binding protein [Verticillium dahliae VdLs.17]
Length = 477
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG +++ + SGA+ +S ++ G +RI+ +SG +D
Sbjct: 116 HIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTVS---DYQKGAVERILTVSGVVDASA 172
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E D+ +KT LRL++P+ GSIIGK GA I+ + S A
Sbjct: 173 KAFGLIIRTLNNE--PLDEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR 230
Query: 155 IKIS 158
+ S
Sbjct: 231 LNAS 234
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P ++P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 179 IRTLNNEPLDEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS-- 236
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 237 CLPMSTERSLVVMGVADAVHIATYYVGSTLLEQLN 271
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 406 QIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITGTDETNRM 461
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 462 ALYMLYSRLESE 473
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 401 QPLTQQIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTDE 457
Query: 93 EILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 458 TNRMALYMLYSRLESEKH 475
>gi|226506792|ref|NP_001146241.1| uncharacterized protein LOC100279814 [Zea mays]
gi|219886335|gb|ACL53542.1| unknown [Zea mays]
gi|413926084|gb|AFW66016.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 692
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 22/191 (11%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + N G +IGK G TI Q QSGA+IQ++R HE PG R + +SG ++I
Sbjct: 139 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQI 198
Query: 95 LRAVDLVIDKLLTELHAED----------QADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+A L I ++L E A A G +T ++ + N+ G IIGK G TI
Sbjct: 199 SKAEQL-IKEVLAEADAGSSGAGSGGRKYNATQPGAET-FQMKIANNKVGLIIGKGGETI 256
Query: 145 KSFMDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
KS +S A I++ L D S +R V + GT EQ+ A + ++ +++ +
Sbjct: 257 KSMQANSGARIQVIPLHLPAGDTS----TERTVHIDGT-QEQIEAAKQLISEVTSENRAR 311
Query: 200 QTMTVPYTYAG 210
M+ Y+ G
Sbjct: 312 NPMSGGYSQQG 322
>gi|24641097|ref|NP_727451.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|24641099|ref|NP_727452.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|24641101|ref|NP_727453.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|24641103|ref|NP_727454.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|24641105|ref|NP_727455.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
gi|22832052|gb|AAN09269.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|22832053|gb|AAN09270.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|22832054|gb|AAN09271.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|22832055|gb|AAN09272.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|22832056|gb|AAN09273.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
Length = 573
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 144
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 145 ACKRILEVMQQEAISTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 199
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 200 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 255
Query: 216 FHGMPYGAVP 225
H M + P
Sbjct: 256 LHPMAMMSTP 265
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ L D +R VT+ GT + Q +
Sbjct: 307 LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 366
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A +I K+ E+ T V T
Sbjct: 367 AQYMIFEKMREEGFMCGTDDVRLT 390
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ + + T+R + I G
Sbjct: 302 QETTYL--YIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 359
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 360 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 416
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 417 VTGSVIKL 424
>gi|196049606|pdb|2JZX|A Chain A, Pcbp2 Kh1-Kh2 Domains
Length = 160
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 89/162 (54%), Gaps = 16/162 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 7 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 61
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 62 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 121
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLK 191
++++ L +S +R +T+ G ++ E ++ + +++L+
Sbjct: 122 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLE 159
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 81 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 138
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 139 IAGIPQSIIECVKQICVVML 158
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G ++K ++S A R++ S +R++TL G + +
Sbjct: 7 IRLLMHGKEVGSIIGKKGESVKKMREESGA-----RINISEGNCPERIITLAGPTNAIFK 61
Query: 184 ALELILLKLSEDTLYSQT 201
A +I+ KL ED S T
Sbjct: 62 AFAMIIDKLEEDISSSMT 79
>gi|367019960|ref|XP_003659265.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
gi|347006532|gb|AEO54020.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
Length = 482
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+P A +IGKGG ++ + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 124 HVRAVISSPEAATIIGKGGENVSKIRQMSGAKCTVS---DYQKGAVERILTVSGIVDAVA 180
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E E + T LRL++P+ GSIIGK GA IK + S A +
Sbjct: 181 KAFGLIIRTLNNEPLNEPSSQHSKT-YPLRLLIPHILIGSIIGKGGARIKEIQEASGARL 239
Query: 156 KIS 158
S
Sbjct: 240 NAS 242
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 187 IRTLNNEPLNEPSSQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDS-- 244
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +T+R +++ G D + A V LL +L+
Sbjct: 245 CLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLN 279
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 405 GAPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITGT 460
Query: 178 LDEQMRALELILLKLSED 195
+ AL ++ +L +
Sbjct: 461 EECNRMALYMLYSRLESE 478
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 407 PLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEEC 463
Query: 94 ILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 464 NRMALYMLYSRLESEKH 480
>gi|308486267|ref|XP_003105331.1| hypothetical protein CRE_21287 [Caenorhabditis remanei]
gi|308256839|gb|EFP00792.1| hypothetical protein CRE_21287 [Caenorhabditis remanei]
Length = 1058
Score = 75.1 bits (183), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 74/122 (60%), Gaps = 5/122 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I+ L+ GA+IGK G ++ ++ + RIQ+S+++E + GT++RI ++ G ++ I+
Sbjct: 521 IKILIPPSAVGAIIGKAGEAMHSLKNGNNCRIQISKNNETYLGTSERICLVKGRLNNIMA 580
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
++ + DK+ T L+ ++ + K+R+++PNSS G +IGK+GA +K I
Sbjct: 581 VIESIQDKIRNTALYHKNTS----RGNKIRIMMPNSSAGIVIGKSGANMKDIRKQFGCQI 636
Query: 156 KI 157
K+
Sbjct: 637 KV 638
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
V +++++P S+ G+IIGKAG + S + + I+IS+ + +Y G ++R+ + G
Sbjct: 515 VSDHLSIKILIPPSAVGAIIGKAGEAMHSLKNGNNCRIQISKNNETYLGTSERICLVKGR 574
Query: 178 LDEQMRALELILLKLSEDTLYSQTMT--------VPYTYAGV 211
L+ M +E I K+ LY + + +P + AG+
Sbjct: 575 LNNIMAVIESIQDKIRNTALYHKNTSRGNKIRIMMPNSSAGI 616
>gi|242078463|ref|XP_002444000.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
gi|241940350|gb|EES13495.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
Length = 629
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 13/224 (5%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT--IDEIL 95
R L + G VIG+GG+TI + + +SGARI + + + II I+ T ID++
Sbjct: 313 RVLCPSGKIGLVIGRGGATIKNIRQESGARIDVDDAKN---DREESIITITSTEAIDDVK 369
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A + LL + D DD + LRL+VPN G +IG+ G+ + ++A I
Sbjct: 370 SAAVEAV--LLLQAKINDYEDD---RMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANI 424
Query: 156 KISRLDHSYYG-LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
IS+ D +D LV ++G D+ AL I+L+L ED L + G
Sbjct: 425 LISKGDKPRRASSSDELVEVSGEADKLRDALVQIILRLREDVLKESVESQNSDRDGKLTV 484
Query: 215 GFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKVLLPWP 258
YG+ +PHN P R+ ++ + L +P
Sbjct: 485 ATSDSLYGSSLSLPALLPHN--PQIAPLSYDRRGESERALEVFP 526
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 43/243 (17%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI---------- 87
R L + L G+VIGK G+ IN + Q+ A++++ + +PG R+I++
Sbjct: 44 RILCPDSLIGSVIGKNGNVINAIRQQTSAKVKVV---DPYPGADKRVILVYCYVKHRDLD 100
Query: 88 ---------SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
D +LR + ++D L H + D + ++VP S ++IG
Sbjct: 101 AEVDDNEPVCAAQDALLRVHNAIVDTL----HRNRRDSDKKNTEEANILVPASQASNVIG 156
Query: 139 KAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTGTLDEQMRAL----ELIL 189
K+GA IK S+A IK+S D HS D V +TG + +AL +I
Sbjct: 157 KSGAVIKHLRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQITGGAEAVKKALFGVSTIIY 216
Query: 190 LKLSEDTLYSQT--------MTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
S++ + +T + +P S F+ P A+P P++ + H+ P
Sbjct: 217 KHPSKENIPLETSIPEPTPSIIIPSELPVYPASNFYSAPDAAIPSVHPSLSILGSTHHVP 276
Query: 242 NMG 244
+
Sbjct: 277 ELA 279
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE-FFPGTTDRIIMISGTIDEIL 95
+R LV N + G +IG+GGS +ND + ++ A I +S+ + ++D ++ +SG D++
Sbjct: 393 LRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEVSGEADKLR 452
Query: 96 RAVDLVIDKLLTELHAE 112
A+ +I +L ++ E
Sbjct: 453 DALVQIILRLREDVLKE 469
>gi|386764188|ref|NP_001036268.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
gi|383293323|gb|ABI30974.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
Length = 631
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 138 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 195
Query: 97 AVDLVIDKLLTELHAEDQAD--DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A +++ + E + ++ + ++ L+++ N+ G IIGK+G TIK M D+
Sbjct: 196 ACKRILEVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 255
Query: 155 IKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
I +S + D + + L +R++T+ G ++ RA I KL + P + + F
Sbjct: 256 ITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMF 311
Query: 214 SGFHGMPYGAVP 225
G H M + P
Sbjct: 312 PGLHPMAMMSTP 323
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ L D +R VT+ GT + Q +
Sbjct: 365 LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 424
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A +I K+ E+ T V T
Sbjct: 425 AQYMIFEKMREEGFMCGTDDVRLT 448
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ + + T+R + I G
Sbjct: 360 QETTYL--YIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 417
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 418 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 474
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 475 VTGSVIKL 482
>gi|449450341|ref|XP_004142921.1| PREDICTED: uncharacterized protein LOC101216803 [Cucumis sativus]
gi|449494409|ref|XP_004159539.1| PREDICTED: uncharacterized LOC101216803 [Cucumis sativus]
Length = 694
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 20/186 (10%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N G +IGKGG TI Q QSGA+IQ++R + P +T R++ + GT D+I +A
Sbjct: 138 KIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQIAKA 197
Query: 98 VDLVIDKLLTELHAEDQADDVGTK--------TKLRLIVPNSSCGSIIGKAGATIKSFMD 149
L+ D +L+E AE + ++ + + +PN+ G +IGK G TIKS
Sbjct: 198 EQLIND-VLSE--AESGGSGIVSRRLTGPSGSEQFVMKIPNNKVGLVIGKGGETIKSMQA 254
Query: 150 DSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
+ A I++ L D S +R + + G+ ++ A +L+ +SE+ + M+
Sbjct: 255 RTGARIQVIPLHLPPGDTS----TERTLQIDGSSEQIESAKQLVNEVISENRARNSGMSG 310
Query: 205 PYTYAG 210
Y G
Sbjct: 311 GYNQQG 316
>gi|291402366|ref|XP_002717547.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 334
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 20/189 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVK-MREESGARINISEGN-----CPERIITLAGPTNAIFK 69
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 70 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 129
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 130 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYWPKP 185
Query: 207 TYAGVFFSG 215
+ + V F+G
Sbjct: 186 SSSPVIFAG 194
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 89 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 146
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 147 IAGIPQSIIECVKQICVVMLETL 169
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 251 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 307
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 308 GSAASISLAQYLINVRLSSE 327
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 251 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 307
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 308 GSAASISLAQYLINVRLSSET 328
>gi|195394077|ref|XP_002055672.1| GJ18657 [Drosophila virilis]
gi|194150182|gb|EDW65873.1| GJ18657 [Drosophila virilis]
Length = 650
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 145 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 202
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 203 ACKRILEVMQQEALSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 257
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 258 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 313
Query: 216 FHGMPYGAVP 225
H M + P
Sbjct: 314 LHPMAMMSTP 323
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ L D +R VT+ GT + Q +
Sbjct: 365 LYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 424
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A +I K+ E+ T V T
Sbjct: 425 AQYMIFEKMREEGFMCGTDDVRLT 448
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ + + T+R + I G
Sbjct: 360 QETTYL--YIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVG 417
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 418 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 474
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 475 VTGSVIKL 482
>gi|443926268|gb|ELU44971.1| cytoplasmic protein [Rhizoctonia solani AG-1 IA]
Length = 389
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 86/156 (55%), Gaps = 11/156 (7%)
Query: 28 SDPTEKPT---YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
SDP P ++R L+ A +IGK G +N+ + +SGAR+ +S E PG +RI
Sbjct: 59 SDPPAPPAAQIHMRCLIVTQDASIIIGKAGKHVNEIREKSGARVMVS---ESIPGNPERI 115
Query: 85 IMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGAT 143
+ +SG +D + ++ L++ ++ E D G++ ++ I+P+S GS+IG+ G+
Sbjct: 116 LNVSGPLDAVSKSFGLIVRRINDEPF--DTPSVPGSRAVTIKFIIPHSRMGSVIGRGGSK 173
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
IK D S A K++ + G +R+++++G D
Sbjct: 174 IKEIQDASGA--KLNASEGMLPGSTERILSVSGVAD 207
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 50/205 (24%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + I+F++ + G+VIG+GGS I + Q SGA+ L+ S PG+T+RI+ +SG
Sbjct: 147 PGSRAVTIKFIIPHSRMGSVIGRGGSKIKEIQDASGAK--LNASEGMLPGSTERILSVSG 204
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDV------GTKTK-------------------- 123
D I A V + L+ + + GT ++
Sbjct: 205 VADAIHIATYYVGNILIEAAERQPHSSSTSTYRPSGTSSRGPRYAPTPTYSGYYGYPPPP 264
Query: 124 ------------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG----- 166
++ +PN G IIGK G+ I S + I+I ++ G
Sbjct: 265 APAPYPPGPPQTQQIYIPNDLVGCIIGKGGSKINEIRSLSASQIRI--MEPGVQGPPGTA 322
Query: 167 ---LNDRLVTLTGTLDEQMRALELI 188
N+RLV +TG A+ L+
Sbjct: 323 QGNPNERLVIITGQPQNIQMAVNLL 347
>gi|355733298|gb|AES10985.1| poly binding protein 2 [Mustela putorius furo]
Length = 148
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 69/124 (55%), Gaps = 7/124 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 82
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 83 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 142
Query: 155 IKIS 158
++++
Sbjct: 143 VQVA 146
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G ++K ++S A R++ S +R++TL G + +
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGA-----RINISEGNCPERIITLAGPTNAIFK 82
Query: 184 ALELILLKLSEDTLYSQT 201
A +I+ KL ED S T
Sbjct: 83 AFAMIIDKLEEDISSSMT 100
>gi|344266065|ref|XP_003405101.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Loxodonta
africana]
Length = 293
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 69/124 (55%), Gaps = 7/124 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS 158
++++
Sbjct: 131 VQVA 134
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 38/203 (18%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q++ + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL----------------TELH--AEDQA------------- 115
I+G I+ V + +L T+LH A Q+
Sbjct: 148 IAGIPQSIIECVKQICVVMLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSA 207
Query: 116 --DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
D T L +PN G IIG+ GA I S A IKI+ + G DR VT
Sbjct: 208 GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVT 264
Query: 174 LTGTLDEQMRALELILLKLSEDT 196
+TG+ A LI ++LS +T
Sbjct: 265 ITGSAASISLAQYLINVRLSSET 287
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G ++K ++S A I IS + +R++TL G + +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 184 ALELILLKLSEDTLYSQT 201
A +I+ KL ED S T
Sbjct: 71 AFAMIIDKLEEDISSSMT 88
>gi|392573629|gb|EIW66768.1| hypothetical protein TREMEDRAFT_65168 [Tremella mesenterica DSM
1558]
Length = 350
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 23/210 (10%)
Query: 21 APVKSLSSDPT----EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
+P + +SS P E +R LVS AG +IGKGG TI D ++++ + +S+
Sbjct: 7 SPTQEVSSSPNGHSDEPQLSLRALVSTKEAGILIGKGGQTIADIRAKTNVKAGVSK---V 63
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA---DDVGTKTKLRLIVPNSSC 133
PG DR+ +SG +D + A V +LL E D + VG T +RL++ ++
Sbjct: 64 VPGVQDRVFSVSGAVDHVAAAFAEVA-RLLLETPLSDSSLPPPPVGAFTSVRLLISHNLM 122
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
G++IG++GA IK D+S A + S+ L S +R+V + G+++ A+ I
Sbjct: 123 GTVIGRSGAKIKQIQDESGARMVASKEMLPQS----TERVVEIQGSVEAIKTAVLEIGKC 178
Query: 192 LSEDTLYSQTMTVPY-----TYAGVFFSGF 216
L ED T TV Y AGV G
Sbjct: 179 LMED-WERNTGTVLYHPGAAGDAGVLAGGL 207
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRS-HEFFPGTTDRIIMISGTIDEILRAVDLVID 103
+ G +IG+GG+ I + + SG+RI ++++ H+ T +R+ I GT D RA+ L+
Sbjct: 274 MVGCIIGRGGTKITEIRRLSGSRISIAKAPHDE---TGERMFTIVGTADATERALMLLYS 330
Query: 104 KLLTE 108
+L +E
Sbjct: 331 QLESE 335
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALEL 187
+P+ G IIG+ G I S + I I++ H G +R+ T+ GT D RAL L
Sbjct: 270 IPSDMVGCIIGRGGTKITEIRRLSGSRISIAKAPHDETG--ERMFTIVGTADATERALML 327
Query: 188 ILLKLSED 195
+ +L +
Sbjct: 328 LYSQLESE 335
>gi|386764191|ref|NP_001245616.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
gi|383293324|gb|AFH07330.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
Length = 638
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 145 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 202
Query: 97 AVDLVIDKLLTELHAEDQAD--DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A +++ + E + ++ + ++ L+++ N+ G IIGK+G TIK M D+
Sbjct: 203 ACKRILEVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 262
Query: 155 IKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
I +S + D + + L +R++T+ G ++ RA I KL + P + + F
Sbjct: 263 ITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMF 318
Query: 214 SGFHGMPYGAVP 225
G H M + P
Sbjct: 319 PGLHPMAMMSTP 330
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ L D +R VT+ GT + Q +
Sbjct: 372 LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 431
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A +I K+ E+ T V T
Sbjct: 432 AQYMIFEKMREEGFMCGTDDVRLT 455
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ + + T+R + I G
Sbjct: 367 QETTYL--YIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 424
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 425 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 481
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 482 VTGSVIKL 489
>gi|281360685|ref|NP_001162717.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|272506050|gb|ACZ95252.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|383873394|gb|AFH55503.1| FI20063p1 [Drosophila melanogaster]
Length = 580
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 144
Query: 97 AVDLVIDKLLTELHAEDQAD--DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A +++ + E + ++ + ++ L+++ N+ G IIGK+G TIK M D+
Sbjct: 145 ACKRILEVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 204
Query: 155 IKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
I +S + D + + L +R++T+ G ++ RA I KL + P + + F
Sbjct: 205 ITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMF 260
Query: 214 SGFHGMPYGAVP 225
G H M + P
Sbjct: 261 PGLHPMAMMSTP 272
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ L D +R VT+ GT + Q +
Sbjct: 314 LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 373
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A +I K+ E+ T V T
Sbjct: 374 AQYMIFEKMREEGFMCGTDDVRLT 397
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ + + T+R + I G
Sbjct: 309 QETTYL--YIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 366
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 367 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 423
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 424 VTGSVIKL 431
>gi|388500506|gb|AFK38319.1| unknown [Lotus japonicus]
Length = 437
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 14/217 (6%)
Query: 19 STAPVKSLSSDPTE-KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
S PV S D ++ + IR L + G VIG+GGSTI + SG RI++ S
Sbjct: 103 SALPVVSGGVDASQSEELIIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSK--- 159
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDK-LLTELHAEDQADDVGTKTKLRLIVPNSSCGSI 136
D ++I T + + ++ LL + D+ D T+ ++L+VP+ G I
Sbjct: 160 -ANHDECLIIITTTESPSDLKSMAVEAVLLIQGKISDEDD---TEVSIQLLVPSKVIGCI 215
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDHSYYG-LNDRLVTLTGTLDEQMRALELILLKLSED 195
IGK+G+ I ++A I+IS+ D +ND LV + G +D AL I+L+L +D
Sbjct: 216 IGKSGSIINEIRKRTRADIRISKGDKPKCADVNDELVEVGGAIDCVRDALIQIILRLRDD 275
Query: 196 TLYSQTMTVPYTYAG-VFFSGFHGMPYGAVPPPVPAV 231
L + T G +SG G Y ++PP +P+V
Sbjct: 276 VLRERDTGHNPTIGGESLYSG--GAAY-SLPPMLPSV 309
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 15 HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSH 74
+G S+ P K S P P+ + L+ G V+GKGG+ I + + SGA I++S +
Sbjct: 350 YGSISSYPTKLYGSLP--PPSTLDILIPANAVGKVLGKGGANIANIRKISGATIEISDAR 407
Query: 75 EFFPGTTDRIIMISGTIDEILRAVDLV 101
DRI +ISGT +E A +L+
Sbjct: 408 ----ARGDRIALISGTPEEKRAAENLI 430
>gi|223947067|gb|ACN27617.1| unknown [Zea mays]
gi|413926085|gb|AFW66017.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 704
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + N G +IGK G TI Q QSGA+IQ++R HE PG R + +SG ++I
Sbjct: 139 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQI 198
Query: 95 LRAVDLVIDKLLTELHAED----------QADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+A L I ++L E A A G +T ++ + N+ G IIGK G TI
Sbjct: 199 SKAEQL-IKEVLAEADAGSSGAGSGGRKYNATQPGAET-FQMKIANNKVGLIIGKGGETI 256
Query: 145 KSFMDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
KS +S A I++ L D S +R V + GT ++ A +LI SE
Sbjct: 257 KSMQANSGARIQVIPLHLPAGDTS----TERTVHIDGTQEQIEAAKQLISEVTSE 307
>gi|413926083|gb|AFW66015.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 317
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 90/180 (50%), Gaps = 15/180 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + N G +IGK G TI Q QSGA+IQ++R HE PG R + +SG ++I
Sbjct: 139 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQI 198
Query: 95 LRAVDLVIDKLLTELHAED----------QADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+A L I ++L E A A G +T ++ + N+ G IIGK G TI
Sbjct: 199 SKAEQL-IKEVLAEADAGSSGAGSGGRKYNATQPGAET-FQMKIANNKVGLIIGKGGETI 256
Query: 145 KSFMDDSQAVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
KS +S A I++ L H G +R V + GT ++ A +LI SE L S+ +
Sbjct: 257 KSMQANSGARIQVIPL-HLPAGDTSTERTVHIDGTQEQIEAAKQLISEVTSEVRLLSRCV 315
>gi|25012807|gb|AAN71494.1| RE72930p [Drosophila melanogaster]
Length = 580
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 144
Query: 97 AVDLVIDKLLTELHAEDQAD--DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A +++ + E + ++ + ++ L+++ N+ G IIGK+G TIK M D+
Sbjct: 145 ACKRILEVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 204
Query: 155 IKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
I +S + D + + L +R++T+ G ++ RA I KL + P + + F
Sbjct: 205 ITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAIAPQS---LMF 260
Query: 214 SGFHGMPYGAVP 225
G H M + P
Sbjct: 261 PGLHPMAMMSTP 272
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ L D +R VT+ GT + Q +
Sbjct: 314 LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 373
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A +I K+ E+ T V T
Sbjct: 374 AQYMIFEKMREEGFMCGTDDVRLT 397
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ + + T+R + I G
Sbjct: 309 QETTYL--YIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 366
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 367 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 423
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 424 VTGSVIKL 431
>gi|400603119|gb|EJP70717.1| KH domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 464
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 108 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVS---DYQKGAVERILTVSGIVDAVA 164
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E A + +KT LRL++P+ GSIIGK GA I+ + S A
Sbjct: 165 KAFGLIIRTLNNE--ALTETSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR 222
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 223 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNERFGGPAASAYA 275
Query: 215 GFHGMPYGAVP---PPVPAVPHNTAAHYG 240
G P G++P VP P + YG
Sbjct: 276 TRSGAPAGSIPGGMQVVPYSPQPASGQYG 304
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 35 TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S P +++R +++ G D
Sbjct: 189 TYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS--CLPMSSERSLVVMGVADA 246
Query: 94 ILRAVDLVIDKLLTELH 110
+ A V LL +L+
Sbjct: 247 VHIATYYVGSTLLEQLN 263
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 393 QIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKINEPQDNS----NERLVTVTGTEECNRM 448
Query: 184 ALELILLKLSED 195
AL L+ +L +
Sbjct: 449 ALYLLYSRLDSE 460
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ ++GT +
Sbjct: 389 PMTQQIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKINEPQD---NSNERLVTVTGTEEC 445
Query: 94 ILRAVDLVIDKLLTELH 110
A+ L+ +L +E H
Sbjct: 446 NRMALYLLYSRLDSEKH 462
>gi|297833144|ref|XP_002884454.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
gi|297330294|gb|EFH60713.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
Length = 568
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 19/170 (11%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
T R LV G++IG+ G I ++ ARI++ + PGTT+R +M+SG
Sbjct: 178 TVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL---DGPPGTTERAVMVSGKEEPE 234
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
++D +LR ++D L E A V T RL+VP S GS+IGK G T+
Sbjct: 235 SSLPPSMDGLLRVHMRIVDGLDGEPSQAPPASKVST----RLLVPASQAGSLIGKQGGTV 290
Query: 145 KSFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRALELILLKL 192
K+ + S ++++ D + L +DR+V + G +ALELI L
Sbjct: 291 KAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHL 340
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 2 ETNESSYVPSPDVHGKRSTAPVKSLSSDPTEKP----TYIRFLVSNPLAGAVIGKGGSTI 57
E ESS PS D + V L +P++ P R LV AG++IGK G T+
Sbjct: 231 EEPESSLPPSMDGLLRVHMRIVDGLDGEPSQAPPASKVSTRLLVPASQAGSLIGKQGGTV 290
Query: 58 NDFQSQSGARIQLSRSHEF--FPGTTDRIIMISGTIDEILRAVDLVIDKL 105
Q S +++ S + F DR++ + G + +A++L+ L
Sbjct: 291 KAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHL 340
>gi|357615456|gb|EHJ69667.1| putative igf2 mRNA binding protein [Danaus plexippus]
Length = 599
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 14/191 (7%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
PT+ P +R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G
Sbjct: 136 PTDFP--LRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNV--GSLEKAITIYG 191
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
D A +++ + E + ++ + L+++ N+ G IIGK G TIK M
Sbjct: 192 NPDNCTNACKRILEVMQQEANNTNKGE-----ICLKILAHNNLIGRIIGKGGNTIKRIMQ 246
Query: 150 DSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTY 208
++ I +S + D + + L +R++T+ GT++ +A I KL + + P +
Sbjct: 247 ETDTKITVSSINDINSFNL-ERIITVKGTIENMAKAESQISAKLRQSYENDLQVLAPQS- 304
Query: 209 AGVFFSGFHGM 219
+ F G H M
Sbjct: 305 --IMFPGLHPM 313
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH------SYYGLNDRLVTLTGTLD 179
L +PN++ G+IIG G+ I++ + S A +KI+ L+ S +R VT+ G+ +
Sbjct: 356 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKVIEGSVAAQQERKVTIVGSPE 415
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYG 222
Q +A LI K+ E+ S + V T A V S G G
Sbjct: 416 AQWKAQYLIFEKMREEGFMSGSDDVRLTVAIVVASSQVGRIIG 458
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTT----DRI 84
+++ TY+ + N GA+IG GS I + S A ++++ + G+ +R
Sbjct: 350 SQETTYL--YIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKVIEGSVAAQQERK 407
Query: 85 IMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+ I G+ + +A L+ +K+ E +DDV + + ++V +S G IIGK G +
Sbjct: 408 VTIVGSPEAQWKAQYLIFEKMREEGFMSG-SDDV--RLTVAIVVASSQVGRIIGKGGQNV 464
Query: 145 KSFMDDSQAVIKI 157
+ + ++IK+
Sbjct: 465 RELQRVTGSLIKL 477
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
T R LV G++IG+ G I ++ ARI++ + PGTT+R +M+SG
Sbjct: 187 TVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL---DGPPGTTERAVMVSGKEEPE 243
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
++D +LR ++D L E V T RL+VP S GS+IGK G T+
Sbjct: 244 SSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVST----RLLVPASQAGSLIGKQGGTV 299
Query: 145 KSFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRALELILLKL 192
K+ + S ++++ D + L +DR+V + G RALELI L
Sbjct: 300 KAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHL 349
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
T R LV G++IG+ G I ++ ARI++ + PGTT+R +M+SG
Sbjct: 187 TVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL---DGPPGTTERAVMVSGKEEPE 243
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
++D +LR ++D L E V T RL+VP S GS+IGK G T+
Sbjct: 244 SSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVST----RLLVPASQAGSLIGKQGGTV 299
Query: 145 KSFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRALELILLKL 192
K+ + S ++++ D + L +DR+V + G RALELI L
Sbjct: 300 KAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHL 349
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
R LV GA+IG+ G I +S ARI++ + PG +R +MIS DE
Sbjct: 116 FRILVPVHKVGAIIGRKGEFIKRMCEESKARIKIL---DGPPGVPERAVMISAK-DEPDE 171
Query: 97 AVDLVIDKLLTELHAE--DQADD--------VGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ +D LL +H D +D GT RL+VP S GS+IGK GATIKS
Sbjct: 172 QISPAMDGLLR-IHKRIADGSDGEFGQTQRGTGTMGPTRLLVPASQAGSLIGKQGATIKS 230
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
D S+AV++I +DR+V + G +A+ELI L
Sbjct: 231 IQDSSKAVVRIVENVPPVALNDDRVVEIQGEPLSVQKAVELIASHL 276
>gi|71988878|ref|NP_001022696.1| Protein M88.5, isoform b [Caenorhabditis elegans]
gi|51011788|emb|CAH10787.1| Protein M88.5, isoform b [Caenorhabditis elegans]
Length = 704
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 24/218 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARI---QLSRSHEFFPGTTDRIIMISGTIDE 93
IR +V +IG GSTI D S + R+ LS+ G DRI+ + G ++
Sbjct: 189 IRCVVEGKYHAVIIGPNGSTIKDIASSTRCRVDFVNLSKKERTVLGNNDRILTVHGVAEQ 248
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+AV ++D + +E +D +VG T LR+ N CG +IGKAG++IK M +
Sbjct: 249 ATKAVARILDVIQSEAVKDDV--NVGADTVLRMRAHNQLCGRLIGKAGSSIKEIMQKTGT 306
Query: 154 VIKISR-----------LDHSYYGLNDRLVTLTG-TLDEQMRALELILLKL-----SEDT 196
I +++ + GL +R + + G +++ ++A LI KL S+
Sbjct: 307 NITVTKYIEPPGGISGLTANELLGLMERTIMVRGPSIEAVVQAEALISAKLKKCYESDSQ 366
Query: 197 LYSQTMTVPYTYAGVFFSGFHGMPYGAVPPP--VPAVP 232
L +Q+M P + G AV P +P P
Sbjct: 367 LRAQSMQCPMPPMMMPPILPPGASSSAVSAPHFIPTPP 404
>gi|198469242|ref|XP_001354960.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
gi|198146781|gb|EAL32016.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
Length = 521
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTN 144
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 145 ACKRILEVMQQEALSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 199
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G ++ RA I KL + P + + F G
Sbjct: 200 VSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPG 255
Query: 216 FHGMPYGAVP 225
H M + P
Sbjct: 256 LHPMAMMSTP 265
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHS--YYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G+ I+S M S A +KI+ LD +R VT+ GT + Q +
Sbjct: 307 LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWK 366
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A +I K+ E+ T V T
Sbjct: 367 AQYMIFEKMREEGFMCGTDDVRLT 390
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISG 89
++ TY+ + N GA+IG GS I S A ++++ + + T+R + I G
Sbjct: 302 QETTYL--YIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVG 359
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
T + +A ++ +K+ E DDV + + L+V +S G IIGK G ++
Sbjct: 360 TPEGQWKAQYMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQR 416
Query: 150 DSQAVIKI 157
+ +VIK+
Sbjct: 417 VTGSVIKL 424
>gi|302692864|ref|XP_003036111.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
gi|300109807|gb|EFJ01209.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
Length = 282
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 83/149 (55%), Gaps = 16/149 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+ A +IG+ G+ +N+ + +SGAR+ +S E PG +RI+ +SG +D +
Sbjct: 3 HMRCLIVTQDASIIIGRAGAHVNEIREKSGARVVVS---ESIPGNPERILNVSGPLDAVS 59
Query: 96 RAVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+A L++ ++ D+ DV G++ ++ ++PNS GS+IGK G+ IK D
Sbjct: 60 KAFGLIVRRI------NDEPFDVPSLPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDA 113
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
S A + S + G +R++++ G D
Sbjct: 114 SGARLNAS--EGMLPGSTERVLSVAGVAD 140
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S P + I+F++ N G+VIGKGGS I + Q SGAR L+ S PG+T+R++ +
Sbjct: 78 SLPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAR--LNASEGMLPGSTERVLSV 135
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQADDV----GTKTKL----------------RLI 127
+G D I A V + L+ + G T+ ++
Sbjct: 136 AGVADAIHIATYYVGNILIEAQERMPSTANASYRPGNPTRRPITNAPYPGSTYVQTQQIY 195
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL--------NDRLVTLTGTLD 179
+PN G IIGK G+ I S + IKI G+ +RLV +TG
Sbjct: 196 IPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVATGMPAGAAGSEGERLVVITGQPA 255
Query: 180 EQMRALELILLKLSED 195
A++++ +L ++
Sbjct: 256 NIQMAVQMLYHRLEQE 271
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 20/114 (17%)
Query: 19 STAPVKSLSSDPTEKP---------TYIR---FLVSNPLAGAVIGKGGSTINDFQSQSGA 66
STA +PT +P TY++ + N L G +IGKGGS IN+ + S +
Sbjct: 162 STANASYRPGNPTRRPITNAPYPGSTYVQTQQIYIPNDLVGCIIGKGGSKINEIRHMSAS 221
Query: 67 RIQLSRSHEFFPG--------TTDRIIMISGTIDEILRAVDLVIDKLLTELHAE 112
+I++ G +R+++I+G I AV ++ +L E +
Sbjct: 222 QIKIMEPGAVATGMPAGAAGSEGERLVVITGQPANIQMAVQMLYHRLEQEKQKQ 275
>gi|453231918|ref|NP_001263701.1| Protein M88.5, isoform d [Caenorhabditis elegans]
gi|413000918|emb|CCO25663.1| Protein M88.5, isoform d [Caenorhabditis elegans]
Length = 730
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARI---QLSRSHEFFPGTTDRIIMISGTIDE 93
IR +V +IG GSTI D S + R+ LS+ G DRI+ + G ++
Sbjct: 189 IRCVVEGKYHAVIIGPNGSTIKDIASSTRCRVDFVNLSKKERTVLGNNDRILTVHGVAEQ 248
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+AV ++D + +E +D +VG T LR+ N CG +IGKAG++IK M +
Sbjct: 249 ATKAVARILDVIQSEAVKDDV--NVGADTVLRMRAHNQLCGRLIGKAGSSIKEIMQKTGT 306
Query: 154 VIKISRL-----------DHSYYGLNDRLVTLTG-TLDEQMRALELILLKL-----SEDT 196
I +++ + GL +R + + G +++ ++A LI KL S+
Sbjct: 307 NITVTKYIEPPGGISGLTANELLGLMERTIMVRGPSIEAVVQAEALISAKLKKCYESDSQ 366
Query: 197 LYSQTMTVPYTYAGVFFSGFHGMPYGAVPPP 227
L +Q+M P + G AV P
Sbjct: 367 LRAQSMQCPMPPMMMPPILPPGASSSAVSAP 397
>gi|340722697|ref|XP_003399740.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Bombus terrestris]
Length = 627
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 22/207 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI + AR+ + R G ++ I I G +
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL--GAAEKAITIYGNPENCTN 246
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ E + + + LR++ N+ G IIGK G TIK M D+ I
Sbjct: 247 ACKKIMEVTQQEAYGLSKGE-----ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKIT 301
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---- 205
+S + D + + L +R++T+ G++D +A +I KL + + Q++ P
Sbjct: 302 VSSINDINNFNL-ERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSLMFPGLHP 360
Query: 206 ---YTYAGVFFSGFHGMPYGAVPPPVP 229
+ AG+ +S YG+ P P P
Sbjct: 361 MAMMSTAGMGYSSRGPGLYGSGPAPYP 387
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ D NDR VT+ G+ + Q +
Sbjct: 409 LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWK 468
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A LI K+ E+ T V T
Sbjct: 469 AQYLIFEKMREEGFVGGTEDVRLT 492
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISGTIDEILR 96
+ N GA+IG GS I + SGA ++++ + P DR + I G+ + +
Sbjct: 409 LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWK 468
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A L+ +K+ E D + + ++VP++ G IIGK G ++ + ++IK
Sbjct: 469 AQYLIFEKMREEGFVGGTED---VRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK 525
Query: 157 IS 158
+S
Sbjct: 526 LS 527
>gi|118792630|ref|XP_320427.3| AGAP012103-PA [Anopheles gambiae str. PEST]
gi|116116989|gb|EAA00333.3| AGAP012103-PA [Anopheles gambiae str. PEST]
Length = 494
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI QS AR+ + R G+ ++ I I G +
Sbjct: 67 LRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNV--GSVEKAITIYGNPENCTM 124
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E ++ ++ + L+++ N+ G IIGK+G TIK M D+ I
Sbjct: 125 ACKKILEVMQQEANSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 179
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D S + L +R++T+ G+++ + I KL + P T + F G
Sbjct: 180 VSSINDISSFNL-ERIITVKGSIENMSKGESQISAKLRQSYENDLQALAPQT---IMFPG 235
Query: 216 FHGM 219
H M
Sbjct: 236 LHPM 239
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN++ G+IIG G I++ + S A +KI+ L D +R VT+ GT + Q +
Sbjct: 286 LYIPNNAVGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQEQQTERKVTIIGTPEAQWK 345
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A LI K+ E+ S T V T
Sbjct: 346 AQYLIFEKMREEGFVSGTDDVRLT 369
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG--TTDRI 84
S+ P E + N GA+IG G I + SGA ++++ P T+R
Sbjct: 274 SNFPIEVQETTYLYIPNNAVGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQEQQTERK 333
Query: 85 IMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+ I GT + +A L+ +K+ E DDV + + + VP++ G IIGK G +
Sbjct: 334 VTIIGTPEAQWKAQYLIFEKMREEGFVSG-TDDV--RLTVEIFVPSAQVGRIIGKGGQNV 390
Query: 145 KSFMDDSQAVIKI 157
+ + ++IK+
Sbjct: 391 RELQRVTGSIIKL 403
>gi|328787572|ref|XP_393878.3| PREDICTED: IGF-II mRNA-binding protein [Apis mellifera]
gi|380027404|ref|XP_003697415.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Apis florea]
Length = 626
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 22/207 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI + AR+ + R G ++ I I G +
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL--GAAEKAITIYGNPENCTN 246
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ E + + + LR++ N+ G IIGK G TIK M D+ I
Sbjct: 247 ACKKIMEVTQQEAYGLSKGE-----ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKIT 301
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---- 205
+S + D + + L +R++T+ G++D +A +I KL + + Q++ P
Sbjct: 302 VSSINDINNFNL-ERIITVKGSIDNMSKAESMISNKLRQSYENDLQAMAPQSLMFPGLHP 360
Query: 206 ---YTYAGVFFSGFHGMPYGAVPPPVP 229
+ AG+ +S YG+ P P P
Sbjct: 361 MAMMSTAGMGYSSRGPGLYGSGPAPYP 387
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ D NDR VT+ G+ + Q +
Sbjct: 409 LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVDQQNDRKVTIVGSPESQWK 468
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A LI K+ E+ + T V T
Sbjct: 469 AQYLIFEKMREEGFVAGTEDVRLT 492
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISGTIDEILR 96
+ N GA+IG GS I + SGA ++++ + P DR + I G+ + +
Sbjct: 409 LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVDQQNDRKVTIVGSPESQWK 468
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A L+ +K+ E D + + ++VP++ G IIGK G ++ + ++IK
Sbjct: 469 AQYLIFEKMREEGFVAGTED---VRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK 525
Query: 157 IS 158
+S
Sbjct: 526 LS 527
>gi|348519761|ref|XP_003447398.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 3 [Oreochromis niloticus]
Length = 588
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 18/239 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI D Q+ +++ + R G ++ I I T +
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKEN--AGAAEKPITIHSTPEGCSA 258
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E + +D+ L+++ NS G +IGK G +K +D+ I
Sbjct: 259 ACRMILDIMQKEANETKTTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTGTKIT 314
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---YT 207
IS L +R +T+ G++D +A I KL E + Q +P
Sbjct: 315 ISSLQDLTIYNPERTITVKGSIDACCKAEVEITKKLREAYENDIAAINQQANLIPGLNLN 374
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKVLLPWPLNPVGMLL 266
G+F SG +P A P AVP A Y P + + + V L P VG L+
Sbjct: 375 ALGIFSSGLPVLPPAA--GPRSAVPAVAPAGYNPFL-QQAPEQEVVYLFIPTQAVGALI 430
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 12 PDVHGKRSTAPVKS-------LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQS 64
P G RS P + L P ++ Y+ + GA+IGK G I +
Sbjct: 387 PPAAGPRSAVPAVAPAGYNPFLQQAPEQEVVYL--FIPTQAVGALIGKKGQHIKQLAHFA 444
Query: 65 GARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE--LHAEDQADDVGTKT 122
GA I+++ + P T+R+++I+GT + +A + KL E A+++ K
Sbjct: 445 GASIKIAPAES--PDVTERMVIITGTPEAQFKAQGRIFGKLKEENFFSAKEE-----VKL 497
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
+ + VP+S+ G +IGK G T+ + + A + + R
Sbjct: 498 ETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPR 534
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G++IGK G IK + A IKI+ + + +R+V +TGT + Q +A
Sbjct: 419 LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESP--DVTERMVIITGTPEAQFKAQ 476
Query: 186 ELILLKLSEDTLYS 199
I KL E+ +S
Sbjct: 477 GRIFGKLKEENFFS 490
>gi|417410720|gb|JAA51826.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 440
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 57 LRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 111
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK----LRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
AV ++ KL +L + + GT ++ LRL++P S CGS+IGKAG IK + +
Sbjct: 112 AVSMIAFKLDEDLCSAPA--NGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTG 169
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY---- 206
A ++++ L +S +R VT++G D + + I + E + T+PY
Sbjct: 170 AQVQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSL 223
Query: 207 TYAGVFFSGFHGMP----YGAVPP 226
+ V S G YGAV P
Sbjct: 224 SLGTVLLSANQGFSVQGQYGAVTP 247
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 138 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 195
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 196 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 255
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 256 LSGHAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 314
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 315 --GNQAEGAGERHVTITGS 331
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 273 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 329
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 330 GSPVSIALAQYLITACLET 348
>gi|348581993|ref|XP_003476761.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Cavia porcellus]
Length = 403
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPAAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R +T+TG+
Sbjct: 278 --GNQAEGAGERHITITGS 294
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R I I+
Sbjct: 236 DPAAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHITIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|47209955|emb|CAF90944.1| unnamed protein product [Tetraodon nigroviridis]
Length = 164
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK G T+ + +SGARI +S + +RI+ I+G + I R ++ K
Sbjct: 9 GSIIGKKGETVKKIREESGARINISEGS-----SPERIVTITGATEAIFRTFAMIAQKFE 63
Query: 107 TELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSY 164
+++A +V +K LRL+ P S CGS+IGK G+ IK + + A ++++
Sbjct: 64 EDINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVA--GDML 121
Query: 165 YGLNDRLVTLTGT 177
+R VT++GT
Sbjct: 122 PDSTERAVTISGT 134
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R + G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 80 PVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQV--AGDMLPDSTERAVTISGTPQA 137
Query: 94 ILRAVDLVIDKLL 106
I + V + +L
Sbjct: 138 ITQCVRHICSVML 150
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
GSIIGK G T+K ++S A I IS +R+VT+TG + R +I K
Sbjct: 9 GSIIGKKGETVKKIREESGARINISEGSSP-----ERIVTITGATEAIFRTFAMIAQKFE 63
Query: 194 ED 195
ED
Sbjct: 64 ED 65
>gi|354484184|ref|XP_003504270.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Cricetulus griseus]
gi|344239809|gb|EGV95912.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Cricetulus
griseus]
Length = 530
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 21/221 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 184
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A++V L+++ N G +IGK G +K ++ I
Sbjct: 185 ACRMILEIMQKEAEDTKLAEEV----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 240
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT+D A I+ KL E + Q +P
Sbjct: 241 ISSLQDLSIYN-PERTITVKGTIDACANAEMEIMKKLREAFENDMLAVNQQANLIPGLNL 299
Query: 207 TYAGVFFSGFHGMPYGA----VPPPVPAVPHNTAAHYGPNM 243
+ G+F +G +P A VPP VP P + + Y PNM
Sbjct: 300 SALGIFSTGLSVLPPPAGPRGVPPSVPYHPFASHSGYFPNM 340
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 361 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 418
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 419 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 475
Query: 157 ISR 159
+ R
Sbjct: 476 VPR 478
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 361 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 418
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 419 AQGRIFGKLKEENFFN 434
>gi|300798415|ref|NP_001178812.1| poly(rC)-binding protein 4 [Rattus norvegicus]
Length = 403
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|453231916|ref|NP_001263700.1| Protein M88.5, isoform c [Caenorhabditis elegans]
gi|413000919|emb|CCO25664.1| Protein M88.5, isoform c [Caenorhabditis elegans]
Length = 854
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 22/186 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARI---QLSRSHEFFPGTTDRIIMISGTIDE 93
IR +V +IG GSTI D S + R+ LS+ G DRI+ + G ++
Sbjct: 313 IRCVVEGKYHAVIIGPNGSTIKDIASSTRCRVDFVNLSKKERTVLGNNDRILTVHGVAEQ 372
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+AV ++D + +E +D +VG T LR+ N CG +IGKAG++IK M +
Sbjct: 373 ATKAVARILDVIQSEAVKDDV--NVGADTVLRMRAHNQLCGRLIGKAGSSIKEIMQKTGT 430
Query: 154 VIKISRL-----------DHSYYGLNDRLVTLTG-TLDEQMRALELILLKL-----SEDT 196
I +++ + GL +R + + G +++ ++A LI KL S+
Sbjct: 431 NITVTKYIEPPGGISGLTANELLGLMERTIMVRGPSIEAVVQAEALISAKLKKCYESDSQ 490
Query: 197 LYSQTM 202
L +Q+M
Sbjct: 491 LRAQSM 496
>gi|227497228|ref|NP_067542.3| poly(rC)-binding protein 4 [Mus musculus]
gi|14715061|gb|AAH10694.1| Poly(rC) binding protein 4 [Mus musculus]
Length = 403
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSED 195
T+TG+ A+ +I KL ED
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDED 86
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|340722699|ref|XP_003399741.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Bombus terrestris]
Length = 577
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 22/207 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI + AR+ + R G ++ I I G +
Sbjct: 139 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL--GAAEKAITIYGNPENCTN 196
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ E + + + LR++ N+ G IIGK G TIK M D+ I
Sbjct: 197 ACKKIMEVTQQEAYGLSKGE-----ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKIT 251
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---- 205
+S + D + + L +R++T+ G++D +A +I KL + + Q++ P
Sbjct: 252 VSSINDINNFNL-ERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSLMFPGLHP 310
Query: 206 ---YTYAGVFFSGFHGMPYGAVPPPVP 229
+ AG+ +S YG+ P P P
Sbjct: 311 MAMMSTAGMGYSSRGPGLYGSGPAPYP 337
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ D NDR VT+ G+ + Q +
Sbjct: 359 LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWK 418
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A LI K+ E+ T V T
Sbjct: 419 AQYLIFEKMREEGFVGGTEDVRLT 442
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISGTIDEILR 96
+ N GA+IG GS I + SGA ++++ + P DR + I G+ + +
Sbjct: 359 LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWK 418
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A L+ +K+ E D + + ++VP++ G IIGK G ++ + ++IK
Sbjct: 419 AQYLIFEKMREEGFVGGTED---VRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK 475
Query: 157 IS 158
+S
Sbjct: 476 LS 477
>gi|12837891|dbj|BAB23990.1| unnamed protein product [Mus musculus]
Length = 403
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSED 195
T+TG+ A+ +I KL ED
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDED 86
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|351698877|gb|EHB01796.1| Poly(rC)-binding protein 4 [Heterocephalus glaber]
Length = 443
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 60 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 114
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 115 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 174
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 175 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 228
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 229 GTVLLSANQGFSVQGQYGAVTP 250
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 276 DPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 332
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 333 GSPVSIALAQYLITACLET 351
>gi|12230430|sp|P57724.1|PCBP4_MOUSE RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957163|gb|AAG09239.1|AF176328_1 alphaCP-4 [Mus musculus]
Length = 403
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSED 195
T+TG+ A+ +I KL ED
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDED 86
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|325191228|emb|CCA26015.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 534
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G +IG+GG TI D Q++SGA IQ+ R E T DR + I+GT + + A L+ + L
Sbjct: 180 GYIIGRGGETIRDLQARSGAHIQIVREEEGAAFTPDRFVSIAGTEEAVESAKKLIQNLLD 239
Query: 107 TELHAEDQADDV--------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
DD G++T L ++VPN G +IG+ GATI+S + I +
Sbjct: 240 ERASGGGSGDDARYGGSNPDGSET-LEILVPNDRVGLVIGRGGATIRSIQVRTGTNITVP 298
Query: 159 RL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQT--MTVPYTYAGVFF 213
+ D + + R +T+ GT++ + A IL + E+ T M VP GV
Sbjct: 299 QTPDATNPTM--RKITVKGTMEAKDAAKNEILGLIQENNNTGSTIYMQVPNDRVGVVI 354
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 19/175 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD---RIIMISGTIDE 93
+ LV N G VIG+GG+TI Q ++G I + ++ P T+ R I + GT++
Sbjct: 264 LEILVPNDRVGLVIGRGGATIRSIQVRTGTNITVPQT----PDATNPTMRKITVKGTME- 318
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
A D +++L + + T + + + VPN G +IGK G TIK D +
Sbjct: 319 ---AKDAAKNEILGLIQENNN-----TGSTIYMQVPNDRVGVVIGKKGETIKGIQDRNTV 370
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI---LLKLSEDTLYSQTMTVP 205
++I ++ R +++ G + RA E I +L+ + T Y Q T P
Sbjct: 371 RVQIPQVPDVGSNPPVRTISIHGAPESLQRAKEEIDSVILQGAGQTGYDQYATDP 425
>gi|71988874|ref|NP_001022695.1| Protein M88.5, isoform a [Caenorhabditis elegans]
gi|29603322|emb|CAA84338.2| Protein M88.5, isoform a [Caenorhabditis elegans]
Length = 828
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 22/186 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARI---QLSRSHEFFPGTTDRIIMISGTIDE 93
IR +V +IG GSTI D S + R+ LS+ G DRI+ + G ++
Sbjct: 313 IRCVVEGKYHAVIIGPNGSTIKDIASSTRCRVDFVNLSKKERTVLGNNDRILTVHGVAEQ 372
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+AV ++D + +E +D +VG T LR+ N CG +IGKAG++IK M +
Sbjct: 373 ATKAVARILDVIQSEAVKDDV--NVGADTVLRMRAHNQLCGRLIGKAGSSIKEIMQKTGT 430
Query: 154 VIKISRL-----------DHSYYGLNDRLVTLTG-TLDEQMRALELILLKL-----SEDT 196
I +++ + GL +R + + G +++ ++A LI KL S+
Sbjct: 431 NITVTKYIEPPGGISGLTANELLGLMERTIMVRGPSIEAVVQAEALISAKLKKCYESDSQ 490
Query: 197 LYSQTM 202
L +Q+M
Sbjct: 491 LRAQSM 496
>gi|268570691|ref|XP_002640810.1| C. briggsae CBR-PES-4 protein [Caenorhabditis briggsae]
Length = 447
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 15/169 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G I + +SGA+I +S +RI+ I+GT+ I +
Sbjct: 76 IRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGS-----CPERIVTITGTLGVIGK 130
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++V +K ++ + T +R+IVP + CGS+IGK G+ IK + + A I+
Sbjct: 131 AFNMVCNKFEEDMLLLPNSVPKPPIT-MRVIVPATQCGSLIGKGGSKIKDIREATGASIQ 189
Query: 157 ISR--LDHSYYGLNDRLVTLTGTLDE---QMRALELILLKLSEDTLYSQ 200
++ L HS +R VTL+GT D M + ILL+++ L ++
Sbjct: 190 VASEMLPHS----TERAVTLSGTADAINLCMTQVCQILLEVTRKKLSTE 234
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R +V G++IGKGGS I D + +GA IQ++ E P +T+R + +SGT D
Sbjct: 154 PITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVA--SEMLPHSTERAVTLSGTADA 211
Query: 94 ILRAVDLVIDKLL----TELHAEDQA 115
I + V LL +L E++A
Sbjct: 212 INLCMTQVCQILLEVTRKKLSTENKA 237
>gi|350424346|ref|XP_003493765.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Bombus impatiens]
Length = 626
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI + AR+ + R G ++ I I G +
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL--GAAEKAITIYGNPENCTN 246
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ E + + + LR++ N+ G IIGK G TIK M D+ I
Sbjct: 247 ACKKIMEVTQQEAYGLSKGE-----ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKIT 301
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---- 205
+S + D + + L +R++T+ G++D +A +I KL + + Q++ P
Sbjct: 302 VSSINDINNFNL-ERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSLMFPGLHP 360
Query: 206 ---YTYAGVFFSGFHGMPYGAVPPPVP 229
+ AG+ +S YG P P P
Sbjct: 361 MAMMSTAGMGYSSRGPGLYGTGPAPYP 387
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ D NDR VT+ G+ + Q +
Sbjct: 409 LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWK 468
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A LI K+ E+ T V T
Sbjct: 469 AQYLIFEKMREEGFVGGTEDVRLT 492
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP--GTTDRIIMISGTIDEILR 96
+ N GA+IG GS I + SGA ++++ + P DR + I G+ + +
Sbjct: 409 LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWK 468
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A L+ +K+ E D + + ++VP++ G IIGK G ++ + ++IK
Sbjct: 469 AQYLIFEKMREEGFVGGTED---VRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK 525
Query: 157 IS 158
+S
Sbjct: 526 LS 527
>gi|386780909|ref|NP_001247796.1| poly(rC)-binding protein 4 [Macaca mulatta]
gi|332216103|ref|XP_003257183.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|332216105|ref|XP_003257184.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|332216107|ref|XP_003257185.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|402859923|ref|XP_003894386.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Papio anubis]
gi|402859925|ref|XP_003894387.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Papio anubis]
gi|402859927|ref|XP_003894388.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Papio anubis]
gi|403291118|ref|XP_003936646.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403291120|ref|XP_003936647.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
gi|355559585|gb|EHH16313.1| hypothetical protein EGK_11579 [Macaca mulatta]
gi|355746662|gb|EHH51276.1| hypothetical protein EGM_10621 [Macaca fascicularis]
gi|380788331|gb|AFE66041.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|380788333|gb|AFE66042.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|383414707|gb|AFH30567.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|384943104|gb|AFI35157.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
Length = 403
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|405957186|gb|EKC23416.1| RNA-binding protein Nova-1 [Crassostrea gigas]
Length = 561
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 30/164 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ LV + AGA+IGKGG TT+R+ +I G ++ +
Sbjct: 55 HLKILVPSIAAGAIIGKGG-------------------------TTERVCLIMGGVEAVK 89
Query: 96 RAVDLVIDKLLTEL----HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
R +++K+ + E+ + +++++VPNS+ G +IGK G IK ++S
Sbjct: 90 RVHCFIMEKIREKPDPNPKPEETNKNFERHRQVKILVPNSTAGMVIGKGGNYIKQIKEES 149
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
A I+IS+ L +R +T+ G +D +A+ELIL K+ ED
Sbjct: 150 GAYIQISQKSKE-TNLPERCITVAGEIDNNRKAVELILQKIVED 192
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE--FFPGTTDRIIMISG 89
E+ ++ LV N AG VIGKGG+ I + +SGA IQ+S+ + P +R I ++G
Sbjct: 117 ERHRQVKILVPNSTAGMVIGKGGNYIKQIKEESGAYIQISQKSKETNLP---ERCITVAG 173
Query: 90 TIDEILRAVDLVIDKLLTE 108
ID +AV+L++ K++ +
Sbjct: 174 EIDNNRKAVELILQKIVED 192
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V+ + GA++G GG I + Q + IQ+S+ + PGT +RI+ ++GT + I +A L
Sbjct: 484 VAESIVGAILGPGGKGIVELQQFTQTNIQISKKGVYVPGTRNRIVTVTGTPNNISKARYL 543
Query: 101 VIDKLLTE 108
+ ++ E
Sbjct: 544 IQQRIQQE 551
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D GT+ K + V S G+I+G G I +Q I+IS+ G +R+VT+T
Sbjct: 473 DKAGTQ-KQEMEVAESIVGAILGPGGKGIVELQQFTQTNIQISKKGVYVPGTRNRIVTVT 531
Query: 176 GTLDEQMRALELILLKLSEDTL 197
GT + +A LI ++ ++ +
Sbjct: 532 GTPNNISKARYLIQQRIQQEEI 553
>gi|296225349|ref|XP_002758447.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Callithrix
jacchus]
gi|296225353|ref|XP_002758449.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Callithrix
jacchus]
gi|297671175|ref|XP_002813714.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pongo abelii]
gi|297671177|ref|XP_002813715.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Pongo abelii]
gi|395733705|ref|XP_003776278.1| PREDICTED: poly(rC)-binding protein 4 [Pongo abelii]
Length = 403
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|348519763|ref|XP_003447399.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 4 [Oreochromis niloticus]
Length = 584
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 22/239 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI D Q+ +++ + R G ++ I I T +
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKEN--AGAAEKPITIHSTPEGCSA 258
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E + +D+ L+++ NS G +IGK G +K +D+ I
Sbjct: 259 ACRMILDIMQKEANETKTTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTGTKIT 314
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---YT 207
IS L +R +T+ G++D +A I KL E + Q +P
Sbjct: 315 ISSLQDLTIYNPERTITVKGSIDACCKAEVEITKKLREAYENDIAAINQQANLIPGLNLN 374
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQNNKVLLPWPLNPVGMLL 266
G+F SG +P A PP +P ++ P M + V L P VG L+
Sbjct: 375 ALGIFSSGLPVLPPAAGPP--TRIPPSS-----PEMSQSAPEQEVVYLFIPTQAVGALI 426
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 48/208 (23%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + +G +I +S + +R I + G+ID +
Sbjct: 282 LKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNPERTITVKGSIDACCK 341
Query: 97 AVDLVIDKLLTELHAED------QADDV----------------------GTKTKL---- 124
A ++ I K L E + D QA+ + G T++
Sbjct: 342 A-EVEITKKLREAYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPPTRIPPSS 400
Query: 125 -------------RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRL 171
L +P + G++IGK G IK + A IKI+ + + +R+
Sbjct: 401 PEMSQSAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESP--DVTERM 458
Query: 172 VTLTGTLDEQMRALELILLKLSEDTLYS 199
V +TGT + Q +A I KL E+ +S
Sbjct: 459 VIITGTPEAQFKAQGRIFGKLKEENFFS 486
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S P ++ Y+ + GA+IGK G I +GA I+++ + P T+R+++
Sbjct: 405 QSAPEQEVVYL--FIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAES--PDVTERMVI 460
Query: 87 ISGTIDEILRAVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
I+GT + +A + KL E A+++ K + + VP+S+ G +IGK G T+
Sbjct: 461 ITGTPEAQFKAQGRIFGKLKEENFFSAKEE-----VKLETHIKVPSSAAGRVIGKGGKTV 515
Query: 145 KSFMDDSQAVIKISR 159
+ + A + + R
Sbjct: 516 NELQNLTSAEVIVPR 530
>gi|410951299|ref|XP_003982335.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Felis catus]
Length = 403
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|397495989|ref|XP_003818826.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Pan paniscus]
gi|397495991|ref|XP_003818827.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan paniscus]
Length = 403
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSSHAVPFATPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|395832731|ref|XP_003789409.1| PREDICTED: poly(rC)-binding protein 4 [Otolemur garnettii]
Length = 403
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|73985377|ref|XP_849987.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Canis lupus
familiaris]
gi|301767222|ref|XP_002919000.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
Length = 403
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|392894107|ref|NP_497351.3| Protein PES-4 [Caenorhabditis elegans]
gi|373220643|emb|CCD73932.1| Protein PES-4 [Caenorhabditis elegans]
Length = 432
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G I + +SGA+I +S +RI+ I+GT+ I +
Sbjct: 74 IRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGS-----CPERIVTITGTLGVIGK 128
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++V +K ++ + T +R+IVP + CGS+IGK G+ IK + + A I+
Sbjct: 129 AFNMVCNKFEEDMLLLPNSVPKPPIT-MRVIVPATQCGSLIGKGGSKIKDIREATGASIQ 187
Query: 157 ISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
++ L HS +R VTL+GT D A+ L + ++ +
Sbjct: 188 VASEMLPHS----TERAVTLSGTAD----AINLCMTQVCQ 219
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R +V G++IGKGGS I D + +GA IQ++ E P +T+R + +SGT D
Sbjct: 152 PITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVA--SEMLPHSTERAVTLSGTADA 209
Query: 94 ILRAVDLVIDKLL 106
I + V LL
Sbjct: 210 INLCMTQVCQILL 222
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G IK ++S A I IS D S +R+VT+TGTL +
Sbjct: 74 IRLLMQGKEVGSIIGKKGDQIKKIREESGAKINIS--DGS---CPERIVTITGTLGVIGK 128
Query: 184 ALELILLKLSEDTL 197
A ++ K ED L
Sbjct: 129 AFNMVCNKFEEDML 142
>gi|14670369|ref|NP_127501.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|14670373|ref|NP_127503.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|291575148|ref|NP_001167571.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|114587184|ref|XP_001170982.1| PREDICTED: poly(rC)-binding protein 4 isoform 12 [Pan troglodytes]
gi|114587188|ref|XP_001171026.1| PREDICTED: poly(rC)-binding protein 4 isoform 14 [Pan troglodytes]
gi|410037040|ref|XP_003950173.1| PREDICTED: poly(rC)-binding protein 4 [Pan troglodytes]
gi|12230429|sp|P57723.1|PCBP4_HUMAN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957167|gb|AAG09241.1|AF176330_1 alphaCP-4 [Homo sapiens]
gi|10436225|dbj|BAB14761.1| unnamed protein product [Homo sapiens]
gi|12804299|gb|AAH03008.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|13278756|gb|AAH04153.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|119585571|gb|EAW65167.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585572|gb|EAW65168.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585573|gb|EAW65169.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585576|gb|EAW65172.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585577|gb|EAW65173.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|261861404|dbj|BAI47224.1| poly(rC) binding protein 4 [synthetic construct]
gi|410227440|gb|JAA10939.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227442|gb|JAA10940.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227444|gb|JAA10941.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262892|gb|JAA19412.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262894|gb|JAA19413.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262896|gb|JAA19414.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301312|gb|JAA29256.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301314|gb|JAA29257.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350315|gb|JAA41761.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350319|gb|JAA41763.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350321|gb|JAA41764.1| poly(rC) binding protein 4 [Pan troglodytes]
Length = 403
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|326935642|ref|XP_003213877.1| PREDICTED: poly(rC)-binding protein 2-like, partial [Meleagris
gallopavo]
Length = 168
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 93/177 (52%), Gaps = 20/177 (11%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGKG S + + +SGARI +S + +RII ++G + I +A ++IDKL
Sbjct: 2 GSIIGKGKS-VKKMREESGARINISEGN-----CPERIITLAGPTNAIFKAFAMIIDKLE 55
Query: 107 TELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDH 162
++ + ++ LRL+VP S CGS+IGK G IK + + A ++++ L +
Sbjct: 56 EDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN 115
Query: 163 SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSG 215
S +R +T+ G + ++ I + + E + +T+PY + + V F+G
Sbjct: 116 S----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSSSPVIFAG 166
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 65 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 122
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 123 IAGIPQSIIECVKQICVVML 142
>gi|222424254|dbj|BAH20084.1| AT5G04430 [Arabidopsis thaliana]
Length = 151
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMG 244
++LIL KL+ED YSQ + PY+YAG+F+SGFHG PY P V +N+ +Y PN
Sbjct: 1 IDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNS-VNYAPNGS 59
Query: 245 GRKFQNNK 252
G K+QN+K
Sbjct: 60 GGKYQNHK 67
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E T + V++ G V+G+GG I + +GARI++S +F GTTDR + I+G
Sbjct: 69 EASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQ 128
Query: 92 DEILRAVDLVIDKL 105
I +A ++ K+
Sbjct: 129 RAIQQAETMIKQKV 142
>gi|426340771|ref|XP_004034301.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Gorilla gorilla
gorilla]
gi|426340773|ref|XP_004034302.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Gorilla gorilla
gorilla]
gi|426340775|ref|XP_004034303.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Gorilla gorilla
gorilla]
Length = 403
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPTEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|405977635|gb|EKC42074.1| Poly(rC)-binding protein 3 [Crassostrea gigas]
Length = 439
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R ++ G++IGK G I F+ SGA+I +S +RI+ ++GT + I +
Sbjct: 14 VRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGS-----CPERIVTVTGTTECIHK 68
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++ K +L LRL+VP S CGS+IGK G+ IK + + A I+
Sbjct: 69 AFTMICKKFEEDLQNTPTVPK--PPVTLRLVVPASQCGSLIGKGGSKIKEIRETTGASIQ 126
Query: 157 ISRLDHSYYGLNDRLVTLTGTLD 179
++ +R VT++GT D
Sbjct: 127 VA--SEMLPNSTERAVTVSGTAD 147
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 24 KSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
+ L + PT + P +R +V G++IGKGGS I + + +GA IQ+ + E P +T
Sbjct: 79 EDLQNTPTVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRETTGASIQV--ASEMLPNST 136
Query: 82 DRIIMISGTIDEILRAVDLVIDKLL 106
+R + +SGT D I + + +L
Sbjct: 137 ERAVTVSGTADAITLCIQNICSIML 161
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+GG IN+ + SGA I++S + E P DR + I+GT + I A
Sbjct: 273 EMAIPNDLIGCIIGRGGQKINEIRQMSGAMIKISNAEEGAP---DRKVTITGTPETIGLA 329
Query: 98 VDLVIDKLLTELH 110
L+ + ELH
Sbjct: 330 QYLINTSM--ELH 340
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+ +PN G IIG+ G I S A+IKIS + G DR VT+TGT
Sbjct: 273 EMAIPNDLIGCIIGRGGQKINEIRQMSGAMIKISNAEE---GAPDRKVTITGT 322
>gi|219128327|ref|XP_002184367.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404168|gb|EEC44116.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 297
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
+P P ++ LVSN +AG++IG+ G TI++ Q+QS RI+LS++ +++PGT DR+ +I
Sbjct: 188 NPANYPFALKILVSNNVAGSIIGRAGQTIDELQTQSQTRIKLSQAGDYYPGTQDRVCLIQ 247
Query: 89 GTIDEILRAVDLVID---KLLTELHAEDQA 115
G + + A+ L++ KL ++ HA+ A
Sbjct: 248 GKPENVRTALQLLLARLFKLQSDQHAQQLA 277
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L+++V N+ GSIIG+AG TI SQ IK+S+ Y G DR+ + G +
Sbjct: 196 LKILVSNNVAGSIIGRAGQTIDELQTQSQTRIKLSQAGDYYPGTQDRVCLIQGKPENVRT 255
Query: 184 ALELILLKL 192
AL+L+L +L
Sbjct: 256 ALQLLLARL 264
>gi|238836386|gb|ACR61401.1| IGF-II mRNA-binding protein 2a variant B [Danio rerio]
Length = 542
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 18/233 (7%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
SL S + +R LV GA+IGK G TI + Q+ +++ + R G ++
Sbjct: 188 SLGSRQKQPDFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKEN--AGAAEKP 245
Query: 85 IMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
I I T + A +++D + E +D+ L+++ NS G +IGK G +
Sbjct: 246 ITIHSTPEGCSTACHMIMDIMQKEAVDTKVTEDI----PLKILAHNSLVGRLIGKEGRNL 301
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLY 198
K +D++ I IS L +R + + G+++ RA I+ KL E +
Sbjct: 302 KKIEEDTETKITISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAIN 361
Query: 199 SQTMTVP---YTYAGVFFSGFHGMPYGAVP---PPVPAVPHNTAAHYGPNMGG 245
Q+ +P + G+F +G +P A P PPVP +N + +GG
Sbjct: 362 QQSNLIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLGG 414
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 22 PVKSLSSDPTEKPTY--IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P +S T+ P + + GA+IGK G I +GA I+++ + P
Sbjct: 420 PASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PD 477
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSII 137
T R+++I+G + +A + KL E A+++ K + + VP+S+ G +I
Sbjct: 478 VTQRMVIITGPPEAQFKAQGRIFGKLKEENFFTAKEE-----VKLETHIKVPSSAAGRVI 532
Query: 138 GKAGATIK 145
GK G T++
Sbjct: 533 GKGGKTVR 540
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK G IK + A IKI+ + + R+V +TG + Q +A
Sbjct: 439 LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESP--DVTQRMVIITGPPEAQFKAQ 496
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 497 GRIFGKLKEENFFT 510
>gi|324505572|gb|ADY42393.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
Length = 415
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 15/193 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + AGAVIGKGG +I +++ A + + S T +RI+ I ID ++R
Sbjct: 107 LRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQ-----TPERIVTIVAEIDNVIR 161
Query: 97 AVDLVIDKLLTELHAEDQADDVGT---KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
V+ +I +L L D +DD G+ +++LRL+V S G+IIG+ G IK +++
Sbjct: 162 CVNEIIPRLDECLKTRD-SDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELREETST 220
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
+K+ +R++ + G ++ + + LI+ L E + + Y +F+
Sbjct: 221 QLKV--YSQCCPQSTERVIQIIGVPEKIIACVILIINMLKEIPIKGPSR----PYESMFY 274
Query: 214 SGFHGMPYGAVPP 226
YG PP
Sbjct: 275 DPNFVHEYGGFPP 287
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K +LRL+VP+ G++IGK G +IK + A + I +R+VT+ +D
Sbjct: 104 KYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQTP-----ERIVTIVAEIDN 158
Query: 181 QMRALELILLKLSE 194
+R + I+ +L E
Sbjct: 159 VIRCVNEIIPRLDE 172
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N L G +IGKGG IN + +SGA I + ++RII ISG+ +I A L
Sbjct: 342 IPNELGGTIIGKGGERINRIREESGAHIVVEPQQP----NSERIITISGSHAQIQTAQYL 397
Query: 101 VIDKLLTEL 109
+ + T +
Sbjct: 398 LQQCVRTSM 406
>gi|427785521|gb|JAA58212.1| Putative igf-ii mrna-binding protein imp [Rhipicephalus pulchellus]
Length = 657
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ G TI QS AR+ + R G+ +++I I G +
Sbjct: 208 LRILVLSDMVGAIIGRAGGTIRQITQQSRARVDVHRKEN--AGSLEKVITIYGNPENCST 265
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E ++ D L+++ N+ G IIGK+G TIK M+ + I
Sbjct: 266 ACQKILEVMQQEASNTNRGD-----VPLKILAHNNLIGRIIGKSGNTIKRIMEQTDTKIT 320
Query: 157 ISRLDHSYYGLN-DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S L H L+ +R++T+ G + RA +L+ KL + P + + F G
Sbjct: 321 VSSL-HDGSALHLERVITIKGKPEGVCRAEQLVSAKLRQSYESDLAALAPQS---LMFPG 376
Query: 216 FHGM 219
H M
Sbjct: 377 LHPM 380
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT-DRIIMISGTIDEILRA 97
+ N GA+IG GGS+I D SGA I++++ ++ P +R + I GT + RA
Sbjct: 448 LYIPNTAVGAIIGTGGSSIRDMIMLSGASIKVAQPNKDDPADAHERKVTIVGTPECQWRA 507
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
++ +K+ E + GT ++ + VP++ G IIGK G T++ ++A+IK+
Sbjct: 508 QSMIFNKVCYE---GCMGNPDGT-LRVEIFVPSNQVGRIIGKGGQTVRELQRLTRALIKL 563
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSY-YGLNDRLVTLTGTLDEQMRA 184
L +PN++ G+IIG G++I+ + S A IK+++ + ++R VT+ GT + Q RA
Sbjct: 448 LYIPNTAVGAIIGTGGSSIRDMIMLSGASIKVAQPNKDDPADAHERKVTIVGTPECQWRA 507
Query: 185 LELILLKL 192
+I K+
Sbjct: 508 QSMIFNKV 515
>gi|358055492|dbj|GAA98612.1| hypothetical protein E5Q_05299 [Mixia osmundae IAM 14324]
Length = 549
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 16/148 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ A +IGKGG +I + + ++G ++ +S E P +RI+ +SG +D + +
Sbjct: 190 LRALIVTQDASIIIGKGGQSIKEIREKAGVKVLVS---ESIPNNPERILNVSGLLDGVSK 246
Query: 97 AVDLVIDKLLTELHAEDQADDV----GTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
A L++ ++ D+ DV G++ +R IVPN GSIIGK GA IK D S
Sbjct: 247 AFGLIVRRI------NDEPFDVPSVPGSRAVTIRFIVPNHRMGSIIGKQGAKIKEIQDAS 300
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLD 179
A ++ + G +R+++++G D
Sbjct: 301 GA--RLQATESMLPGSTERILSISGVAD 326
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+ S P + IRF+V N G++IGK G+ I + Q SGAR+Q + S PG+T+RI+
Sbjct: 262 VPSVPGSRAVTIRFIVPNHRMGSIIGKQGAKIKEIQDASGARLQATES--MLPGSTERIL 319
Query: 86 MISGTIDEILRAV 98
ISG D I AV
Sbjct: 320 SISGVADAIHIAV 332
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN---DRLVTL 174
VG ++ +PN G IIGK G I ++S A IKI ++ S GLN +RLV +
Sbjct: 459 VGPNQTQQVYIPNELVGPIIGKGGLKINELRNNSGAHIKI--MEPSEGGLNPNGERLVNV 516
Query: 175 TGTLDEQMRALELILLKLSED 195
+G A++++ +L ++
Sbjct: 517 SGQPANIQMAVQMLYQRLEQE 537
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE--FFPGTTDRIIMISGTIDEIL 95
+ + N L G +IGKGG IN+ ++ SGA I++ E P +R++ +SG I
Sbjct: 466 QVYIPNELVGPIIGKGGLKINELRNNSGAHIKIMEPSEGGLNP-NGERLVNVSGQPANIQ 524
Query: 96 RAVDLVIDKLLTE 108
AV ++ +L E
Sbjct: 525 MAVQMLYQRLEQE 537
>gi|26346528|dbj|BAC36915.1| unnamed protein product [Mus musculus]
Length = 403
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R VT++G D A+ L + ++ L S + T+PY
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPD----AIILCVRQICAVILGSPPKGATIPYHPSL 186
Query: 207 TYAGVFFSGFHGMP----YGAVPP 226
+ V S G YGAV P
Sbjct: 187 SLGTVLLSANQGFSVQGQYGAVTP 210
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILGSPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSED 195
T+TG+ A+ +I KL ED
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDED 86
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|393247644|gb|EJD55151.1| hypothetical protein AURDEDRAFT_50272, partial [Auricularia
delicata TFB-10046 SS5]
Length = 313
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 95/192 (49%), Gaps = 18/192 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV+ AG +IGK G + D + +G + +S+ PG +R++ I+G++D + +
Sbjct: 3 LRALVTTKDAGVIIGKAGKNVADIRDHTGVKAGVSK---VVPGVHERVLTITGSVDGVAK 59
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L+I +LL+ + +T LRL++ ++ GS+IG+ G IK+ D S A +
Sbjct: 60 AYTLIITQLLSASTSSPTISSPPPTQTALRLLISHNLMGSVIGRNGLKIKAIQDASGARM 119
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
S+ L S +R+V + GT + RA+E I L ED Q V F
Sbjct: 120 VASKDMLPQS----TERIVEVQGTAEAIGRAIEEIGKCLLEDWERGQGT--------VLF 167
Query: 214 SGFHGMPYGAVP 225
HG+ G P
Sbjct: 168 HPGHGVDDGRSP 179
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 49/206 (23%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T +R L+S+ L G+VIG+ G I Q SGAR+ S+ + P +T+RI+ + GT + I
Sbjct: 86 TALRLLISHNLMGSVIGRNGLKIKAIQDASGARMVASK--DMLPQSTERIVEVQGTAEAI 143
Query: 95 LRAVDLVIDKLLTE---------LHAEDQADD---------------------------- 117
RA++ + LL + H DD
Sbjct: 144 GRAIEEIGKCLLEDWERGQGTVLFHPGHGVDDGRSPSRRSPASTFTSPSGMGRSSPVPSS 203
Query: 118 -----VGTKTKLR---LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
+ LR + +P+ G IIG+ G I S + I I++ H G +
Sbjct: 204 PQSVNSASANNLRTQNISIPSDMVGCIIGRQGTKITEIRRLSGSKISIAKTPHDETG--E 261
Query: 170 RLVTLTGTLDEQMRALELILLKLSED 195
R+ T+ GT + +AL L+ +L +
Sbjct: 262 RMFTIVGTPEANEKALFLLYNQLESE 287
>gi|448538474|ref|XP_003871504.1| Pbp2 RNA binding protein [Candida orthopsilosis Co 90-125]
gi|380355861|emb|CCG25380.1| Pbp2 RNA binding protein [Candida orthopsilosis]
Length = 579
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 19/179 (10%)
Query: 10 PSPDVH----GKRSTAPVKSLSSDPTEKPTYIRFLVSNPL--AGAVIGKGGSTINDFQSQ 63
P P H + ++ PV S D P+Y+ F + P+ A V+GK G+ IN + +
Sbjct: 161 PEPQQHLEESAQATSNPVAS-QKDYESDPSYVSFRMYCPVKEASTVVGKQGAKINHLREK 219
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT- 122
+ +IQ+S + G +RII + GT + + RA L++ +L E ED ++ ++
Sbjct: 220 ADVKIQISDN---LRGVPERIITVRGTAENVARAFGLIVRTILGE--PEDVPANLSSQQY 274
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLD 179
L+L+VPN+ G IIGK G + ++S A +K + L HS DR++++ G D
Sbjct: 275 NLKLLVPNAIIGYIIGKQGLKFREIEENSAAKLKAAEQPLPHS----TDRVLSVLGVAD 329
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ-AVIKIS--RLDHSYYG-----LND 169
G K + V NSS GS+IGK G IK ++S + +KI R G N
Sbjct: 488 AGDKYNQDVFVANSSIGSVIGKGGNNIKHIRENSGCSYVKIEPDRGQSIMLGGGRGLTNI 547
Query: 170 RLVTLTGTLDEQMRALELILLKLSED 195
R +TLTG+L+ +A+ LI +++ D
Sbjct: 548 RRLTLTGSLESFQKAIYLINQRINAD 573
>gi|354476373|ref|XP_003500399.1| PREDICTED: poly(rC)-binding protein 4 [Cricetulus griseus]
gi|344252773|gb|EGW08877.1| Poly(rC)-binding protein 4 [Cricetulus griseus]
Length = 403
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSTNQGFSVQGQYGAVAP 210
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVAPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|322792902|gb|EFZ16735.1| hypothetical protein SINV_14612 [Solenopsis invicta]
Length = 555
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ G+TI + AR+ + R G+ ++ I I G +
Sbjct: 114 LRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNV--GSLEKAITIYGNPENCTN 171
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++ + E + ++ + L+++ N+ G IIGK G TIK M D+ I
Sbjct: 172 ACKKILEVMQQEANNTNKGE-----ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKIT 226
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---- 205
+S + D + + L +R++T+ G++D +A +I KL + + Q+M P
Sbjct: 227 VSSINDINSFNL-ERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHP 285
Query: 206 ---YTYAGVFFSGFHGMPYGAVPPPVP 229
+ AG+ +S YG+ P P P
Sbjct: 286 MAMMSTAGMGYSSRGPGLYGSGPAPYP 312
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG--TTDRIIMIS 88
T++ T++ + N GA+IG GS I + SGA ++++ + P T+R + I
Sbjct: 328 TQETTFL--YIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIV 385
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G+ + +A L+ +K+ E + D + + ++VP++ G IIGK G ++
Sbjct: 386 GSPESQWKAQYLIFEKMREEGYVAGTED---VRLTIEILVPSTQVGRIIGKGGQNVRELQ 442
Query: 149 DDSQAVIKIS 158
+ +VIK+S
Sbjct: 443 RVTGSVIKLS 452
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ L D +R VT+ G+ + Q +
Sbjct: 334 LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWK 393
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A LI K+ E+ + T V T
Sbjct: 394 AQYLIFEKMREEGYVAGTEDVRLT 417
>gi|308460519|ref|XP_003092563.1| CRE-PES-4 protein [Caenorhabditis remanei]
gi|308253083|gb|EFO97035.1| CRE-PES-4 protein [Caenorhabditis remanei]
Length = 436
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 12/145 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G I + +SGA+I +S +RI+ I+GT+ I +
Sbjct: 75 IRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGS-----CPERIVTITGTLGVIGK 129
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++V +K ++ + T +R+IVP + CGS+IGK G+ IK + + A I+
Sbjct: 130 AFNMVCNKFEEDMLLLPNSVPKPPIT-MRVIVPATQCGSLIGKGGSKIKDIREATGASIQ 188
Query: 157 ISR--LDHSYYGLNDRLVTLTGTLD 179
++ L HS +R VTL+GT D
Sbjct: 189 VASEMLPHS----TERAVTLSGTAD 209
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R +V G++IGKGGS I D + +GA IQ++ E P +T+R + +SGT D
Sbjct: 153 PITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVA--SEMLPHSTERAVTLSGTADA 210
Query: 94 ILRAVDLVIDKLL 106
I + V LL
Sbjct: 211 INLCMTQVCQILL 223
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G IK ++S A I IS D S +R+VT+TGTL +
Sbjct: 75 IRLLMQGKEVGSIIGKKGDQIKKIREESGAKINIS--DGS---CPERIVTITGTLGVIGK 129
Query: 184 ALELILLKLSEDTL 197
A ++ K ED L
Sbjct: 130 AFNMVCNKFEEDML 143
>gi|393218460|gb|EJD03948.1| hypothetical protein FOMMEDRAFT_140050 [Fomitiporia mediterranea
MF3/22]
Length = 347
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P ++ +R LVS AG +IGKGG + D + ++G + +S+ PG +R++ +SG
Sbjct: 32 PIKETLTLRALVSTKDAGVIIGKGGKNVADLRDETGVKAGVSK---VVPGVHERVLTVSG 88
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
++++ +A L+I +L+ + T +RL++ ++ G+IIG+ G IK+ D
Sbjct: 89 DVEKVAKAYRLIIAQLIDASPPSPTTTSPPSNTSIRLLISHNLMGTIIGRGGLKIKAIQD 148
Query: 150 DSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
S A + S+ L S +R+V + G+ D A+E I L ED Q
Sbjct: 149 ASGARMVASKDMLPQS----TERIVEVQGSADAIGLAIEQIGKCLLEDWERGQ 197
>gi|357465707|ref|XP_003603138.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492186|gb|AES73389.1| Far upstream element-binding protein [Medicago truncatula]
Length = 1145
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 27/190 (14%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N G +IGKGG TI Q QSGA+IQ++R + P + R++ + GT D + A
Sbjct: 89 KIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGTPDAVSSA 148
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRLI-----------VPNSSCGSIIGKAGATIKS 146
+KL+ E+ AE +A G T+ R++ +PN+ G IIGK G TIKS
Sbjct: 149 -----EKLINEVLAEAEAGASGGGTR-RMVAQSGGDEFVMQIPNNKVGLIIGKGGETIKS 202
Query: 147 FMDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLS-EDTLYSQ 200
+ A I++ L D S +R + + GT D+ A +L+ L+ E+ L +
Sbjct: 203 MQASTGARIQVIPLHPPPGDTS----TERTLKIDGTPDQIESAKQLVNQILTGENRLRNS 258
Query: 201 TMTVPYTYAG 210
+ YT G
Sbjct: 259 GNSGGYTQQG 268
>gi|324516472|gb|ADY46541.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 360
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G I + SGA+I +S +RI+ I+G +D I +
Sbjct: 25 IRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDG-----SCPERIVTITGNVDTINK 79
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++ +K ++ A + T +RLIVP + CGS+IGK G+ IK + + A I+
Sbjct: 80 AFSMICNKFQEDMQALPNSVPKPPIT-MRLIVPATQCGSLIGKGGSKIKEIREATGASIQ 138
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
++ +R VT++G+ D + ++ I L E + T+PY F
Sbjct: 139 VA--SEMLPSSTERAVTISGSADAIVLCMQHICHILLEAP--PKGTTLPYRPKPTF 190
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
+++L + + P +R +V G++IGKGGS I + + +GA IQ+ + E P +T+
Sbjct: 92 MQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQV--ASEMLPSSTE 149
Query: 83 RIIMISGTIDEILRAVDLVIDKLL 106
R + ISG+ D I+ + + LL
Sbjct: 150 RAVTISGSADAIVLCMQHICHILL 173
>gi|320591828|gb|EFX04267.1| kh domain containing RNA-binding protein [Grosmannia clavigera
kw1407]
Length = 476
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Query: 19 STAPVKSLSSDPTEKPTYI--RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
+TAP ++ ++ ++ ++I R ++S+P A +IGKGG ++ + S A+ +S ++
Sbjct: 99 NTAPSQTAPANAHDETSWIHIRAVISSPEAATIIGKGGENVSKIRQMSNAKCTVS---DY 155
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGS 135
G +RI+ +SG +D + +A L+I L E E + +KT LRL++P+ GS
Sbjct: 156 QKGAVERILTVSGVVDAVAKAFGLIIRTLNNEPLGE--PSNAHSKTYPLRLLIPHILIGS 213
Query: 136 IIGKAGATIKSFMDDSQAVIKIS 158
IIGK G+ IK + S A + S
Sbjct: 214 IIGKGGSRIKEIQEASGARLNAS 236
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGGS I + Q SGAR+ S S
Sbjct: 181 IRTLNNEPLGEPSNAHSKTYPLRLLIPHILIGSIIGKGGSRIKEIQEASGARLNASDS-- 238
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +++R +++ G D + A V LL +L+
Sbjct: 239 CLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLN 273
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTG 176
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TG
Sbjct: 398 AGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNS----NERLVTITG 453
Query: 177 TLDEQMRALELILLKLSED 195
T + AL ++ +L +
Sbjct: 454 TEECNRMALYMLYSRLESE 472
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 401 PLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQD---NSNERLVTITGTEEC 457
Query: 94 ILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 458 NRMALYMLYSRLESEKH 474
>gi|343424730|emb|CBQ68268.1| related to poly(rC)-binding protein 3 [Sporisorium reilianum SRZ2]
Length = 436
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 15/176 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGKGG+ + D + Q+G + +S+ PG DR++ ++GT+ I
Sbjct: 49 VRALVSTKEAGIIIGKGGANVADLREQTGVKAGVSK---VVPGVHDRVLSVTGTLVGIAD 105
Query: 97 AVDLVIDKLL-----TELHAEDQ-ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
A L+ +L T + A+ A+ T +RL++ ++ G++IG+ G IK D
Sbjct: 106 AFALIAKTILENPLNTPVQADGSPAESAAQSTSVRLLISHNLMGTVIGRQGLKIKHIQDL 165
Query: 151 SQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
S A + S+ L S +R+V + G++D A+ I+ L+ED SQ + +
Sbjct: 166 SGARMVASKEMLPQS----TERVVEVQGSVDSIRVAIHEIVKCLAEDWDRSQNVVL 217
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSR-SHEFFPGTTDRIIMISGTIDEILRAVDLVID 103
+ G +IGKGGS I + + SG+RI +++ H+ T +R+ I GT + +A+ L+ +
Sbjct: 339 MVGCIIGKGGSKITEIRRLSGSRISIAKVPHDE---TGERMFTIQGTPEANEKALFLLYN 395
Query: 104 KLLTE 108
+L TE
Sbjct: 396 QLETE 400
>gi|354542879|emb|CCE39597.1| hypothetical protein CPAR2_600100 [Candida parapsilosis]
Length = 607
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 91/165 (55%), Gaps = 18/165 (10%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPL--AGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
T+ ++ SDP+ Y+ F + P+ A V+GKGG+ IN + ++ +IQ+S + +
Sbjct: 199 TSSLQDFESDPS----YVSFRMYCPVKEASTVVGKGGAKINHLREKAQVKIQISENLKDV 254
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSI 136
P +RII + GT + + +A L++ +L E ED+ ++ ++ L+L++PN G I
Sbjct: 255 P---ERIITVKGTAENVAKAFGLIVRTILGE--PEDEPANLNSQQYNLKLLIPNVIIGHI 309
Query: 137 IGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLD 179
IGK G + ++S A +K + L HS DR++++ G D
Sbjct: 310 IGKQGLKFREIEENSAAKLKAAESPLPHS----TDRVLSVLGVAD 350
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV---IKISRLDHSYYG-----LNDR 170
G K + V NSS GS+IGK G IK ++S I+ R G N R
Sbjct: 517 GDKYNQDIFVANSSIGSVIGKGGNNIKHIRENSGCTYVRIEPDRGQSIMLGGGRGLTNIR 576
Query: 171 LVTLTGTLDEQMRALELILLKLSED 195
+TLTG+L+ +A+ LI +++ D
Sbjct: 577 RLTLTGSLESFQKAIYLINQRINTD 601
>gi|167614344|gb|ABZ89744.1| IGF-II mRNA-binding protein 2a [Danio rerio]
Length = 607
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +++ + R G ++ I I T +
Sbjct: 200 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKEN--AGAAEKPITIHSTPEGCST 257
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E +D+ L+++ NS G +IGK G +K +D++ I
Sbjct: 258 ACHMIMDIMQKEAVDTKVTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTETKIT 313
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---YT 207
IS L +R + + G+++ RA I+ KL E + Q+ +P +
Sbjct: 314 ISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQQSNLIPGLSLS 373
Query: 208 YAGVFFSGFHGMPYGAVP---PPVPAVPHNTAAHYGPNMGG 245
G+F +G +P A P PPVP +N + +GG
Sbjct: 374 ALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLGG 414
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 22 PVKSLSSDPTEKPTY--IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P +S T+ P + + GA+IGK G I +GA I+++ + P
Sbjct: 420 PASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PD 477
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSII 137
T R+++I+G + +A + KL E A+++ K + + VP+S+ G +I
Sbjct: 478 VTQRMVIITGPPEAQFKAQGRIFGKLKEENFFTAKEE-----VKLETHIKVPSSAAGRVI 532
Query: 138 GKAGATIKSFMDDSQAVIKISR 159
GK G T+ + + A + + R
Sbjct: 533 GKGGKTVNELQNLTSAEVIVPR 554
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK G IK + A IKI+ + + R+V +TG + Q +A
Sbjct: 439 LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESP--DVTQRMVIITGPPEAQFKAQ 496
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 497 GRIFGKLKEENFFT 510
>gi|238836390|gb|ACR61403.1| IGF-II mRNA-binding protein 2a variant D [Danio rerio]
Length = 388
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 18/233 (7%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
SL S + +R LV GA+IGK G TI + Q+ +++ + R G ++
Sbjct: 34 SLGSRQKQPDFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENA--GAAEKP 91
Query: 85 IMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
I I T + A +++D + E +D+ L+++ NS G +IGK G +
Sbjct: 92 ITIHSTPEGCSTACHMIMDIMQKEAVDTKVTEDI----PLKILAHNSLVGRLIGKEGRNL 147
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLY 198
K +D++ I IS L +R + + G+++ RA I+ KL E +
Sbjct: 148 KKIEEDTETKITISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAIN 207
Query: 199 SQTMTVP---YTYAGVFFSGFHGMPYGAVP---PPVPAVPHNTAAHYGPNMGG 245
Q+ +P + G+F +G +P A P PPVP +N + +GG
Sbjct: 208 QQSNLIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLGG 260
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 22 PVKSLSSDPTEKPTY--IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P +S T+ P + + GA+IGK G I +GA I+++ + P
Sbjct: 266 PASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PD 323
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSII 137
T R+++I+G + +A + KL E A+++ K + + VP+S+ G +I
Sbjct: 324 VTQRMVIITGPPEAQFKAQGRIFGKLKEENFFTAKEE-----VKLETHIKVPSSAAGRVI 378
Query: 138 GKAGATIK 145
GK G T++
Sbjct: 379 GKGGKTVR 386
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK G IK + A IKI+ + + R+V +TG + Q +A
Sbjct: 285 LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESP--DVTQRMVIITGPPEAQFKAQ 342
Query: 186 ELILLKLSEDTLYSQT--------MTVPYTYAG 210
I KL E+ ++ + VP + AG
Sbjct: 343 GRIFGKLKEENFFTAKEEVKLETHIKVPSSAAG 375
>gi|242021846|ref|XP_002431354.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212516622|gb|EEB18616.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 234
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 7 LNDDPNITLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIV 60
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT---KLRLIVPNSSCGSIIGKAGA 142
++G + I +A L+ K + +G LRLIVP S CGS+IGK G+
Sbjct: 61 TVTGPTNAIFKAFSLICKKFEEFQELQSGGGSMGIPKPPITLRLIVPASQCGSLIGKGGS 120
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
IK + + A I+++ +R VT++GT + + + I + E +
Sbjct: 121 KIKEIREVTGASIQVA--SEMLPNSTERAVTISGTSEAITQCIYHICCVMLESP--PKGA 176
Query: 203 TVPY 206
T+PY
Sbjct: 177 TIPY 180
>gi|195972875|ref|NP_001108030.2| insulin-like growth factor 2 mRNA-binding protein 2 [Danio rerio]
gi|124021198|gb|ABM88867.1| IGF2 mRNA-binding protein 2 [Danio rerio]
Length = 607
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +++ + R G ++ I I T +
Sbjct: 200 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKEN--AGAAEKPITIHSTPEGCST 257
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E +D+ L+++ NS G +IGK G +K +D++ I
Sbjct: 258 ACHMIMDIMQKEAVDTKVTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTETKIT 313
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---YT 207
IS L +R + + G+++ RA I+ KL E + Q+ +P +
Sbjct: 314 ISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQQSNLIPGLSLS 373
Query: 208 YAGVFFSGFHGMPYGAVP---PPVPAVPHNTAAHYGPNMGG 245
G+F +G +P A P PPVP +N + +GG
Sbjct: 374 ALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLGG 414
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 22 PVKSLSSDPTEKPTY--IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P +S T+ P + + GA+IGK G I +GA I+++ + P
Sbjct: 420 PASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PD 477
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSII 137
T R+++I+G + +A + KL E A+++ K + + VP+S+ G +I
Sbjct: 478 VTQRMVIITGPPEAQFKAQGRIFGKLKEENFFTAKEE-----VKLETHIKVPSSAAGRVI 532
Query: 138 GKAGATIKSFMDDSQAVIKISR 159
GK G T+ + + A + + R
Sbjct: 533 GKGGKTVNELQNLTSAEVIVPR 554
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK G IK + A IKI+ + + R+V +TG + Q +A
Sbjct: 439 LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESP--DVTQRMVIITGPPEAQFKAQ 496
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 497 GRIFGKLKEENFFT 510
>gi|391348567|ref|XP_003748518.1| PREDICTED: poly(rC)-binding protein 3-like [Metaseiulus
occidentalis]
Length = 418
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 104/233 (44%), Gaps = 46/233 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT-DRIIMISGTIDEIL 95
+R ++ G++IGK G I F+ SGA+I +S GT +RI+ ++G+ + IL
Sbjct: 14 VRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISD------GTCPERIVTVTGSTECIL 67
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTK------------------LRLIVPNSSCGSII 137
+A L+ K E+ + G+ T+ LRLIVP S CGS+I
Sbjct: 68 KAFSLICAKF------EEMSSLSGSPTESALNGQKVLPGQTPPPVTLRLIVPASQCGSLI 121
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
GKAG+ I+ + + A ++++ +R VT+ GT D + + I + E
Sbjct: 122 GKAGSKIREIREITGASVQVA--SEMLPNSTERTVTVAGTADAVTKCIYQICCVMLE--C 177
Query: 198 YSQTMTVPY----TYAGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGP 241
+ T+PY V F+G G Y A+P P H A + P
Sbjct: 178 PPKGATIPYRPKPAMPPVIFAG--GQAYTVQGSYAIPHPDLTKLHQLALQHAP 228
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 23 VKSLSSDPTEK--------------PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARI 68
+ SLS PTE P +R +V G++IGK GS I + + +GA +
Sbjct: 80 MSSLSGSPTESALNGQKVLPGQTPPPVTLRLIVPASQCGSLIGKAGSKIREIREITGASV 139
Query: 69 QLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
Q+ + E P +T+R + ++GT D + + +
Sbjct: 140 QV--ASEMLPNSTERTVTVAGTADAVTKCI 167
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
+ N L G VIGKGG IN+ + SGA I++S + E G+ +R + ISGT + I
Sbjct: 311 IPNDLIGCVIGKGGQKINEIRQLSGATIKISSTEE---GSKERCVSISGTPEAI 361
>gi|326488325|dbj|BAJ93831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
+ R LVS GA+IG+ G I +S ARI++ + PG +R +MIS
Sbjct: 120 SVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKIL---DGPPGVPERAVMISAKDEPD 176
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGAT 143
ID +LR + + D L +E DQA + RL+VP S GS+IGK G T
Sbjct: 177 ALVPPAIDVLLRVHNRITDGLDSET---DQAQKGASPAGPTRLLVPASQAGSLIGKQGTT 233
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
IKS D S+ ++I +DR+V + G + +A+ELI L
Sbjct: 234 IKSIQDASKCALRILENVPPVALNDDRVVEIQGEPHDVHKAVELIANHL 282
>gi|389641821|ref|XP_003718543.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
gi|351641096|gb|EHA48959.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
Length = 483
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG ++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 127 HIRAVISSPEAATIIGKGGENVSKIRQMSSAKCTVS---DYQKGAVERILTVSGIVDAVA 183
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E +E + T LRL++P+ GSIIGK GA IK + S A +
Sbjct: 184 KAFGLIIRTLNNEPLSEPSSAHSKT-YPLRLLIPHILIGSIIGKGGARIKEIQEASGARL 242
Query: 156 KIS 158
S
Sbjct: 243 NAS 245
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 190 IRTLNNEPLSEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDS-- 247
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +++R +++ G D + A V LL +L+
Sbjct: 248 CLPLSSERSLVVMGVADAVHIATYYVGSTLLEQLN 282
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 406 GASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNS----NERLVTITGT 461
Query: 178 LDEQMRALELILLKLSED 195
+ AL ++ +L +
Sbjct: 462 EECNRMALYMLYSRLESE 479
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS 71
P VHG P+ P + + N + GA+IGKGG IN+ + SG+ I+++
Sbjct: 387 PQVHGA-PHQPMHGQMPGPGGASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKIN 445
Query: 72 RSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+ + +R++ I+GT + A+ ++ +L +E H
Sbjct: 446 EPQD---NSNERLVTITGTEECNRMALYMLYSRLESEKH 481
>gi|440469758|gb|ELQ38855.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482264|gb|ELQ62771.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 490
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG ++ + S A+ +S ++ G +RI+ +SG +D +
Sbjct: 127 HIRAVISSPEAATIIGKGGENVSKIRQMSSAKCTVS---DYQKGAVERILTVSGIVDAVA 183
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E +E + T LRL++P+ GSIIGK GA IK + S A +
Sbjct: 184 KAFGLIIRTLNNEPLSEPSSAHSKT-YPLRLLIPHILIGSIIGKGGARIKEIQEASGARL 242
Query: 156 KIS 158
S
Sbjct: 243 NAS 245
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P +P TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 190 IRTLNNEPLSEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDS-- 247
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +++R +++ G D + A V LL +L+
Sbjct: 248 CLPLSSERSLVVMGVADAVHIATYYVGSTLLEQLN 282
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 406 GASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNS----NERLVTITGT 461
Query: 178 LDEQMRALELILLKL 192
+ AL ++ +L
Sbjct: 462 EECNRMALYMLYSRL 476
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS 71
P VHG P+ P + + N + GA+IGKGG IN+ + SG+ I+++
Sbjct: 387 PQVHGAPHQ-PMHGQMPGPGGASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKIN 445
Query: 72 RSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ + +R++ I+GT + A+ ++ +L
Sbjct: 446 EPQD---NSNERLVTITGTEECNRMALYMLYSRL 476
>gi|189237154|ref|XP_973939.2| PREDICTED: similar to igf2 mRNA binding protein, putative
[Tribolium castaneum]
Length = 1116
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 111/257 (43%), Gaps = 18/257 (7%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP L + +R LV + + GA+IG+ GSTI Q+ AR+ + R G+
Sbjct: 116 APFGGLPGQSRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNV--GS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQ--ADDVGTKTKLRLIVPNSSCGSIIG 138
++ I I G + A +++ + E + ++ A + L+++ N+ G IIG
Sbjct: 174 LEKAITIYGNPENCTNACKRILEVMQQEANNTNKGYAKKYYYEICLKILAHNNLIGRIIG 233
Query: 139 KAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
K G TIK M ++ I +S + D + + L +R++T+ G +D RA I KL +
Sbjct: 234 KGGNTIKRIMQETDTKITVSSINDINSFNL-ERIITVKGAIDNMSRAEAQISAKLRQSYE 292
Query: 198 YSQTMTVPYTYAGVFFSGFH--------GMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQ 249
P T + F G H G+ YG+ P+ G GG Q
Sbjct: 293 NDLQAMAPQT---MMFPGLHPMAMMATAGIGYGSRGLYTGQAPYPGMYPAGAAQGGGDSQ 349
Query: 250 NNKVLLPWPLNPVGMLL 266
L P N VG ++
Sbjct: 350 ETTYLYI-PNNAVGAII 365
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 48/207 (23%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGKGG+TI ++ +I +S ++ +RII + G ID + R
Sbjct: 219 LKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVKGAIDNMSR 278
Query: 97 AVDLVIDKLLTELHAEDQA-------------------DDVG------------------ 119
A + KL + QA +G
Sbjct: 279 AEAQISAKLRQSYENDLQAMAPQTMMFPGLHPMAMMATAGIGYGSRGLYTGQAPYPGMYP 338
Query: 120 ---------TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHS--YYGLN 168
++ L +PN++ G+IIG G+ I++ + S A +KI+ +D + N
Sbjct: 339 AGAAQGGGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQN 398
Query: 169 DRLVTLTGTLDEQMRALELILLKLSED 195
+R VT+ G+ + Q +A LI K+ E+
Sbjct: 399 ERRVTIVGSPEAQWKAQYLIFEKMREE 425
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT--DRIIMIS 88
+++ TY+ + N GA+IG GS I + SGA ++++ E P T +R + I
Sbjct: 348 SQETTYL--YIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIV 405
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
G+ + +A L+ +K+ E +DDV + + ++VP+S G IIGK G ++
Sbjct: 406 GSPEAQWKAQYLIFEKMREEGFVAG-SDDV--RLTVEIMVPSSQVGRIIGKGGQNVRELQ 462
Query: 149 DDSQAVIKI 157
+ +VIK+
Sbjct: 463 RVTGSVIKL 471
>gi|383862495|ref|XP_003706719.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Megachile
rotundata]
Length = 560
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG-----SCPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVGT-KTKLRLIVPNSSCGSIIGKAG 141
++G + I +A L+ K ++ H V LRLIVP S CGS+IGK G
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGG 123
Query: 142 ATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 124 SKIKEIREVTGASIQVASEMLPNS----TERAVTISGTSEAITQCIYHICCVMLESP--P 177
Query: 200 QTMTVPY 206
+ T+PY
Sbjct: 178 KGATIPY 184
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
V N L G +IGKGG+ I + + SGA I++S E G TDR I I+G D + A
Sbjct: 369 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 428
Query: 98 VDLV 101
L+
Sbjct: 429 QYLI 432
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 369 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 428
Query: 185 LELILL--KLSEDTLYSQTMTVP 205
LI + +L + L +Q P
Sbjct: 429 QYLISMSVELQKANLEAQNTQTP 451
>gi|294657857|ref|XP_460153.2| DEHA2E19492p [Debaryomyces hansenii CBS767]
gi|199432999|emb|CAG88426.2| DEHA2E19492p [Debaryomyces hansenii CBS767]
Length = 347
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 27/200 (13%)
Query: 13 DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
+ +G+ +T P + +S+ + Y R LVS +G +IG+ G+ I+ + ++ + +S+
Sbjct: 44 NANGETNTLPSINDNSNSSALINY-RVLVSAKESGCLIGQNGAVIDSIREETNTKAGISK 102
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL---------------LTELHAEDQADD 117
PG+ +RI+ +SGT+D+ +A+ L L +L + +
Sbjct: 103 ---LQPGSHERILTVSGTLDDCAKALSYFAQALCNANIENLVSYSYFPLKQLSSNPCVE- 158
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYY--GLNDRLVTLT 175
G T LRL++PN+ G++IG GA I+ QA IS + + G N+RLV L
Sbjct: 159 -GETTILRLLIPNAQMGTLIGSKGARIQQI----QANYNISMIASKSFLPGSNERLVELQ 213
Query: 176 GTLDEQMRALELILLKLSED 195
GT+D +L +I L ED
Sbjct: 214 GTVDNLYDSLRIISRCLIED 233
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 6 SSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSG 65
S YVP + + + K + + T I F +N + GA+IGK GS I + SG
Sbjct: 241 SYYVPKASNYARNNNQTNKRFN-NQNAVTTSISF--ANDMVGALIGKNGSRIQGVRKVSG 297
Query: 66 ARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD 116
A I +S E P +R+ ISGT + +A L+ L E +++
Sbjct: 298 ATIGISDEVEGKP---ERVFTISGTAHAVEKAKSLLYHNLEREEQRRAESE 345
>gi|348519757|ref|XP_003447396.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Oreochromis niloticus]
Length = 611
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI D Q+ +++ + R G ++ I I T +
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKEN--AGAAEKPITIHSTPEGCSA 258
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E + +D+ L+++ NS G +IGK G +K +D+ I
Sbjct: 259 ACRMILDIMQKEANETKTTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTGTKIT 314
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---YT 207
IS L +R +T+ G++D +A I KL E + Q +P
Sbjct: 315 ISSLQDLTIYNPERTITVKGSIDACCKAEVEITKKLREAYENDIAAINQQANLIPGLNLN 374
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
G+F SG +P A P AVP A Y P
Sbjct: 375 ALGIFSSGLPVLPPAA--GPRSAVPAVAPAGYNP 406
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S P + P ++ Y+ + GA+IGK G I +GA I+++ + P
Sbjct: 424 SAIPHQHSQQAPEQEVVYL--FIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAES--P 479
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSI 136
T+R+++I+GT + +A + KL E A+++ K + + VP+S+ G +
Sbjct: 480 DVTERMVIITGTPEAQFKAQGRIFGKLKEENFFSAKEE-----VKLETHIKVPSSAAGRV 534
Query: 137 IGKAGATIKSFMDDSQAVIKISR 159
IGK G T+ + + A + + R
Sbjct: 535 IGKGGKTVNELQNLTSAEVIVPR 557
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G++IGK G IK + A IKI+ + + +R+V +TGT + Q +A
Sbjct: 442 LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESP--DVTERMVIITGTPEAQFKAQ 499
Query: 186 ELILLKLSEDTLYSQTMTV 204
I KL E+ +S V
Sbjct: 500 GRIFGKLKEENFFSAKEEV 518
>gi|341891904|gb|EGT47839.1| CBN-PES-4 protein [Caenorhabditis brenneri]
Length = 438
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G I + +SGA+I +S +RI+ I+GT+ I +
Sbjct: 78 IRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGS-----CPERIVTITGTLGVIGK 132
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++V +K ++ + T +R+IVP + CGS+IGK G+ IK + + A I+
Sbjct: 133 AFNMVCNKFEEDMLLLPNSVPKPPIT-MRVIVPATQCGSLIGKGGSKIKDIREATGASIQ 191
Query: 157 ISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
++ L HS +R VTL+GT D A+ L + ++ +
Sbjct: 192 VASEMLPHS----TERAVTLSGTAD----AINLCMTQVCQ 223
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R +V G++IGKGGS I D + +GA IQ++ E P +T+R + +SGT D
Sbjct: 156 PITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVAS--EMLPHSTERAVTLSGTADA 213
Query: 94 ILRAVDLVIDKLL 106
I + V LL
Sbjct: 214 INLCMTQVCQILL 226
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G IK ++S A I IS D S +R+VT+TGTL +
Sbjct: 78 IRLLMQGKEVGSIIGKKGDQIKKIREESGAKINIS--DGS---CPERIVTITGTLGVIGK 132
Query: 184 ALELILLKLSEDTL 197
A ++ K ED L
Sbjct: 133 AFNMVCNKFEEDML 146
>gi|238836388|gb|ACR61402.1| IGF-II mRNA-binding protein 2a variant C [Danio rerio]
Length = 453
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +++ + R G ++ I I T +
Sbjct: 46 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENA--GAAEKPITIHSTPEGCST 103
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E +D+ L+++ NS G +IGK G +K +D++ I
Sbjct: 104 ACHMIMDIMQKEAVDTKVTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTETKIT 159
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---YT 207
IS L +R + + G+++ RA I+ KL E + Q+ +P +
Sbjct: 160 ISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQQSNLIPGLSLS 219
Query: 208 YAGVFFSGFHGMPYGAVP---PPVPAVPHNTAAHYGPNMGG 245
G+F +G +P A P PPVP +N + +GG
Sbjct: 220 ALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLGG 260
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 22 PVKSLSSDPTEKPTY--IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P +S T+ P + + GA+IGK G I +GA I+++ + P
Sbjct: 266 PASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAES--PD 323
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSII 137
T R+++I+G + +A + KL E A+++ K + + VP+S+ G +I
Sbjct: 324 VTQRMVIITGPPEAQFKAQGRIFGKLKEENFFTAKEE-----VKLETHIKVPSSAAGRVI 378
Query: 138 GKAGATIKSFMDDSQAVIKISR 159
GK G T+ + + A + + R
Sbjct: 379 GKGGKTVNELQNLTSAEVIVPR 400
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK G IK + A IKI+ + + R+V +TG + Q +A
Sbjct: 285 LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESP--DVTQRMVIITGPPEAQFKAQ 342
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 343 GRIFGKLKEENFFT 356
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
+ R LV G++IG+ G I ++ ARI++ + PGTT+R +M+S
Sbjct: 152 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMVSAKEEPD 208
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+D +LR ++D L + + + GTK RL+VP S GS+IGK G T+
Sbjct: 209 SALPPAMDGLLRVHKRIVDGLDGD--SSHASSGTGTKVSTRLLVPASQAGSLIGKQGGTV 266
Query: 145 KSFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRALELILLKL 192
KS + S V+++ D + L +DR+V + G +A+ELI L
Sbjct: 267 KSIQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHL 316
>gi|427796273|gb|JAA63588.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 510
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 38/235 (16%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R ++ G++IGK G I F+ +SGA+I +S +RI+ ++G+ + IL+
Sbjct: 76 VRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDGS-----CPERIVTVTGSTEAILK 130
Query: 97 AVDLVIDKL-----------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
A L+ K L EL + + + LRLIVP S CGS+IGK
Sbjct: 131 AFSLIARKFEEMLSLLCLPVQTVGPTLQELQS-NGSHLPKPPVTLRLIVPASQCGSLIGK 189
Query: 140 AGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
G+ IK + + A I+++ +R VT++GT + + + I + E
Sbjct: 190 GGSKIKEIREVTGASIQVA--SEMLPNSTERAVTVSGTAEAITKCIYQICCVMMESP--P 245
Query: 200 QTMTVPY----TYAGVFFSGFHGMPYG-----AVPPPVPAVPHNTAAHYGPNMGG 245
+ T+PY V F+G G Y A+P P H A + P + G
Sbjct: 246 KGATIPYRPKPAMPPVIFAG--GQAYTVQGQYAIPHPDLTKLHQLALQHAPLLPG 298
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N L G +IGKGGS IN+ + SGA I++S S E G+ DR + ISGT + I A L
Sbjct: 339 IPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEE---GSKDRTVTISGTPEAINLAQYL 395
Query: 101 VIDKLLTELH 110
+ + ELH
Sbjct: 396 INTSM--ELH 403
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+ +PN G IIGK G+ I S A IKIS +S G DR VT++GT
Sbjct: 336 EMTIPNDLIGCIIGKGGSKINEIRQLSGATIKIS---NSEEGSKDRTVTISGT 385
>gi|242038781|ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
gi|241920639|gb|EER93783.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
Length = 430
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 1 METNESSYVPSPDVHGKRSTAPVKSLSSD-----PTEKPTYIRFLVSNPLAGAVIGKGGS 55
E E+++ PD+ ++ + V ++ D P E + R LV GA+IG+ G
Sbjct: 85 QEELENAFSGDPDM-AQKDNSQVNNVDDDKWPGWPGE--SVFRILVPAQKVGAIIGRKGE 141
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----------TIDEILRAVDLVIDKL 105
I ++ ARI++ + PG +R +MIS +D +LR + D
Sbjct: 142 FIKKMCEETKARIKIL---DGPPGVPERAVMISAKDEPDAPLSPAVDGLLRVHKRITDSS 198
Query: 106 LTEL-HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSY 164
E + A ++G RL+VP+S GS+IGK GATIKS D S++V++I
Sbjct: 199 NGESGQLQRSAGNIGP---TRLLVPSSQAGSLIGKQGATIKSIQDSSKSVVRIVENVPPV 255
Query: 165 YGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGA- 223
+DR+V + G +A+ELI L + + + + T+ + HGMP
Sbjct: 256 ALNDDRVVEIQGEPLGVQKAVELIASHLRKFLVDRSVLPLFETHMKM-----HGMPREQP 310
Query: 224 VPPPVPAVPHNTAAHYGP 241
VPPP H+GP
Sbjct: 311 VPPP---------QHWGP 319
>gi|324519086|gb|ADY47282.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 342
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G I + SGA+I +S +RI+ I+G +D I +
Sbjct: 25 IRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDG-----SCPERIVTITGNVDTINK 79
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++ +K ++ A + T +RLIVP + CGS+IGK G+ IK + + A I+
Sbjct: 80 AFSMICNKFQEDMQALPNSVPKPPIT-MRLIVPATQCGSLIGKGGSKIKEIREATGASIQ 138
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
++ +R VT++G+ D + ++ I L E
Sbjct: 139 VA--SEMLPSSTERAVTISGSADAIVLCMQHICHILLE 174
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
+++L + + P +R +V G++IGKGGS I + + +GA IQ+ + E P +T+
Sbjct: 92 MQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQV--ASEMLPSSTE 149
Query: 83 RIIMISGTIDEILRAVDLVIDKLL 106
R + ISG+ D I+ + + LL
Sbjct: 150 RAVTISGSADAIVLCMQHICHILL 173
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G IKS D S A I IS D S +R+VT+TG +D +
Sbjct: 25 IRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINIS--DGS---CPERIVTITGNVDTINK 79
Query: 184 ALELILLKLSED 195
A +I K ED
Sbjct: 80 AFSMICNKFQED 91
>gi|198425067|ref|XP_002127946.1| PREDICTED: similar to insulin-like growth factor 2 mRNA binding
protein 1 [Ciona intestinalis]
Length = 601
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LV + GA+IGKGG +I ++ ARI + R PG T++ I I+GT + A
Sbjct: 197 RMLVPSQYVGAIIGKGGDSIRAITQKTHARIDVHRKDN--PGATEKAITINGTPEACGAA 254
Query: 98 VDLVIDKLLTELHAEDQA------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
V ++D + E QA DD+ L+++ NS G +IGK G +K+ +
Sbjct: 255 VGAILDIVRDEDRNARQAAGTWNDDDI----PLKILAHNSLIGRLIGKEGRNLKAIQEKV 310
Query: 152 QAVIKISRLDHSYYGLN-DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV----PY 206
+ I IS N +R + + G D A L++ KL + Y M + P+
Sbjct: 311 ETKIAISNSMADMQQCNAERTIAIYGDNDRCAEAEVLLMEKLR--SCYENDMMIAQQQPH 368
Query: 207 TYAGVFF---SGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGRKFQ 249
Y G+ F S F G+ G H YG N G+ F+
Sbjct: 369 QYPGINFNQLSMFGGLQGG--------YGHPGMREYGMNYQGQNFR 406
>gi|345311367|ref|XP_001520914.2| PREDICTED: poly(rC)-binding protein 4-like [Ornithorhynchus
anatinus]
Length = 447
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 19 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTGAVFH 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L +K LRL++P S CGS+IGKAGA IK + + A
Sbjct: 74 AVSMIAFKLDEDLCTGPPNGGSVSKPPVTLRLVIPASQCGSLIGKAGAKIKEIRESTGAQ 133
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++G D + + I + E + T+PY
Sbjct: 134 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPY 181
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG
Sbjct: 97 SKPPVTLRLVIPASQCGSLIGKAGAKIKEIRESTGAQVQV--AGDLLPNSTERAVTVSGV 154
Query: 91 IDEILRAVDLVIDKLL 106
D I+ V + +L
Sbjct: 155 PDAIILCVRQICAVIL 170
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G+ +R + I+
Sbjct: 274 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQTE---GSGERHVTIT 330
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 331 GSPVSIALAQYLITACLET 349
>gi|380024759|ref|XP_003696159.1| PREDICTED: poly(rC)-binding protein 3-like [Apis florea]
Length = 560
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG-----SCPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVGT-KTKLRLIVPNSSCGSIIGKAG 141
++G + I +A L+ K ++ H + V LRLIVP S CGS+IGK G
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGG 123
Query: 142 ATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 124 SKIKEIREVTGASIQVASDMLPNS----TERAVTISGTSEAITQCIYHICCVMLESP--P 177
Query: 200 QTMTVPY 206
+ T+PY
Sbjct: 178 KGATIPY 184
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
V N L G +IGKGG+ I + + SGA I++S E G TDR I I+G D + A
Sbjct: 369 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLA 428
Query: 98 VDLV 101
L+
Sbjct: 429 QYLI 432
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 369 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLA 428
Query: 185 LELILL--KLSEDTLYSQTMTVP 205
LI + +L + L +Q P
Sbjct: 429 QYLISMSVELQKANLEAQNTQTP 451
>gi|270001418|gb|EEZ97865.1| hypothetical protein TcasGA2_TC000237 [Tribolium castaneum]
Length = 415
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 24 KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
K++ +D + IR ++ G++IGK G + F+ +SGA+I +S +R
Sbjct: 4 KNMINDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPER 58
Query: 84 IIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK------TKLRLIVPNSSCGSII 137
I+ ++G+ + I +A L+ K E ++ Q + G LRLIVP S CGS+I
Sbjct: 59 IVTVTGSTNAIFKAFTLICKKF-EEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLI 117
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
GK G+ IK + + A I+++ +R VT++GT + + + I + E
Sbjct: 118 GKGGSKIKEIREVTGASIQVA--SEMLPNSTERAVTISGTGEAITQCIYHICTVMLESP- 174
Query: 198 YSQTMTVPY 206
+ T+PY
Sbjct: 175 -PKGATIPY 182
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VPN G IIGK G I S A+I+IS D G+ DR +T++G D A
Sbjct: 322 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALA 381
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
LI +++S +T AG+ G+H
Sbjct: 382 QYLINMRISMET------------AGLPMPGYH 402
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
V N L G +IGKGG+ I + + SGA I++S + G TDR I ISG D + A
Sbjct: 322 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALA 381
Query: 98 VDLV 101
L+
Sbjct: 382 QYLI 385
>gi|335299138|ref|XP_003358505.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Sus scrofa]
Length = 403
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSTNQGFSVQGQYGAVTP 210
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|383862493|ref|XP_003706718.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Megachile
rotundata]
Length = 466
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVGT-KTKLRLIVPNSSCGSIIGKAG 141
++G + I +A L+ K ++ H V LRLIVP S CGS+IGK G
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGG 123
Query: 142 ATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQT 201
+ IK + + A I+++ +R VT++GT + + + I + E +
Sbjct: 124 SKIKEIREVTGASIQVA--SEMLPNSTERAVTISGTSEAITQCIYHICCVMLESP--PKG 179
Query: 202 MTVPY 206
T+PY
Sbjct: 180 ATIPY 184
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
V N L G +IGKGG+ I + + SGA I++S E G TDR I I+G D + A
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQ 335
Query: 99 DLV 101
L+
Sbjct: 336 YLI 338
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQ 335
Query: 186 ELILL--KLSEDTLYSQTMTVP 205
LI + +L + L +Q P
Sbjct: 336 YLISMSVELQKANLEAQNTQTP 357
>gi|350405177|ref|XP_003487350.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus impatiens]
Length = 466
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVGT-KTKLRLIVPNSSCGSIIGKAG 141
++G + I +A L+ K ++ H + V LRLIVP S CGS+IGK G
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGG 123
Query: 142 ATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 124 SKIKEIREVTGASIQVASDMLPNS----TERAVTISGTSEAITQCIYHICCVMLESP--P 177
Query: 200 QTMTVPY 206
+ T+PY
Sbjct: 178 KGATIPY 184
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
V N L G +IGKGG+ I + + SGA I++S E G TDR I I+G D + A
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQ 335
Query: 99 DLV 101
L+
Sbjct: 336 YLI 338
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQ 335
Query: 186 ELILL--KLSEDTLYSQTMTVP 205
LI + +L + L +Q P
Sbjct: 336 YLISMSVELQKANLEAQNTQTP 357
>gi|345497208|ref|XP_001599286.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Nasonia vitripennis]
Length = 643
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 28/210 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV + + GA+IG+ GSTI + AR+ + R G+ ++ I I G +
Sbjct: 190 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNL--GSLEKAITIYGNPENCTN 247
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A K+L +H E + G T L+++ N+ G IIGK G TIK M D+ I
Sbjct: 248 ACK----KILEVMHQEASNTNKGEIT-LKILAHNNLIGRIIGKGGNTIKRIMQDTDTKIT 302
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
+S + D + + L +R++T+ G+++ +A +I KL + P + + F G
Sbjct: 303 VSSINDINSFNL-ERIITVKGSIENMSKAEAMISNKLRQSYENDLQAMAPQS---MMFPG 358
Query: 216 FHGMP----------------YGAVPPPVP 229
H M YG P P P
Sbjct: 359 LHPMAMMSTASMGYNSRGPALYGTGPAPYP 388
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDR 83
L+SD E T++ + N GA+IG GS I + SGA ++++ S + T+R
Sbjct: 400 LTSDAQET-TFL--YIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLESDKPAEQQTER 456
Query: 84 IIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGAT 143
+ I G+ + +A L+ +K+ E D + + ++VP++ G IIGK G
Sbjct: 457 KVTIVGSPESQWKAQYLIFEKMREEGFVSGTED---VRLTVEILVPSAQVGRIIGKGGQN 513
Query: 144 IKSFMDDSQAVIKIS 158
++ + +VIK+S
Sbjct: 514 VRELQRVTGSVIKLS 528
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL--DHSYYGLNDRLVTLTGTLDEQMR 183
L +PN+S G+IIG G+ I++ + S A +KI+ L D +R VT+ G+ + Q +
Sbjct: 410 LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLESDKPAEQQTERKVTIVGSPESQWK 469
Query: 184 ALELILLKLSEDTLYSQTMTVPYT 207
A LI K+ E+ S T V T
Sbjct: 470 AQYLIFEKMREEGFVSGTEDVRLT 493
>gi|297825693|ref|XP_002880729.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
gi|297326568|gb|EFH56988.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
Length = 634
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + N G +IGKGG TI Q QSGA+IQ++R + P T R + ++GT D+I
Sbjct: 134 TTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNATTRTVDLTGTPDQI 193
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGTKT---------KLRLIVPNSSCGSIIGKAGATIK 145
+A L+ D +L E A + A G + + +PN+ G IIGK G TIK
Sbjct: 194 SKAEQLITD-VLQEAEAGNTAGSGGGGRRMGGQAGADQFVMKIPNNKVGLIIGKGGETIK 252
Query: 146 SFMDDSQAVIKI 157
S + A I++
Sbjct: 253 SMQAKTGARIQV 264
>gi|431921619|gb|ELK18971.1| Poly(rC)-binding protein 2 [Pteropus alecto]
Length = 446
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 19/173 (10%)
Query: 51 GKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
GK G ++ + +SGARI +S + +RII ++G + I +A ++IDKL ++
Sbjct: 22 GKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFKAFAMIIDKLEEDIS 76
Query: 111 AEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYG 166
+ +K LRL+VP S CGS+IGK G IK + + A ++++ L +S
Sbjct: 77 SSMTNSTAASKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNS--- 133
Query: 167 LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSG 215
+R +T+ G + ++ I + + E + +T+PY + + V F+G
Sbjct: 134 -TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSSSPVIFAG 183
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ ++ P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 82 STAASKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 139
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 140 IAGIPQSIIECVKQICVVML 159
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 258 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 314
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 315 GSAASISLAQYLI 327
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 258 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 314
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTV 204
G+ A LI + L SQ +V
Sbjct: 315 GSAASISLAQYLINVSLENAKPSSQAASV 343
>gi|431913482|gb|ELK15157.1| Poly(rC)-binding protein 4 [Pteropus alecto]
Length = 403
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTEL-HAEDQADDVGTK-TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCSATANGGNISRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPGMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|340726176|ref|XP_003401437.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus terrestris]
Length = 466
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVGT-KTKLRLIVPNSSCGSIIGKAG 141
++G + I +A L+ K ++ H + V LRLIVP S CGS+IGK G
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGG 123
Query: 142 ATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 124 SKIKEIREVTGASIQVASDMLPNS----TERAVTISGTSEAITQCIYHICCVMLESP--P 177
Query: 200 QTMTVPY 206
+ T+PY
Sbjct: 178 KGATIPY 184
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
V N L G +IGKGG+ I + + SGA I++S E G TDR I I+G D + A
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQ 335
Query: 99 DLV 101
L+
Sbjct: 336 YLI 338
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ G + VPN G IIGK G I S A+I+IS + G DR +
Sbjct: 263 NRQQPAGNNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTI 322
Query: 173 TLTGTLDEQMRALELILL--KLSEDTLYSQTMTVP 205
T+TG D A LI + +L + L +Q P
Sbjct: 323 TITGNPDAVALAQYLISMSVELQKANLEAQNTQTP 357
>gi|346322193|gb|EGX91792.1| KH domain RNA binding protein [Cordyceps militaris CM01]
Length = 464
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + S A+ +S ++ G +RI+ +SG +D
Sbjct: 108 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVS---DYQKGAVERILTVSGIVDAAA 164
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E E +KT LRL++P+ GSIIGK GA I+ + S A
Sbjct: 165 KAFGLIIRTLNNEPLTE--TSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR 222
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 223 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNERFGGPAASAYA 275
Query: 215 GFHGMPYGAVP---PPVPAVPHNTAAHYG 240
G P G++P VP P + YG
Sbjct: 276 TRSGTPAGSIPGGMQVVPYSPQPASGQYG 304
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 23 VKSLSSDP-TEKPTY------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P TE T +R L+ + L G++IGKGG+ I + Q SGAR+ S S
Sbjct: 171 IRTLNNEPLTETSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS-- 228
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
P +++R +++ G D + A V LL +L+
Sbjct: 229 CLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLN 263
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 387 GAPMTQQIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKINEPQDNS----NERLVTVTGT 442
Query: 178 LDEQMRALELILLKLSED 195
+ AL L+ +L +
Sbjct: 443 EECNRMALYLLYARLDSE 460
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ ++GT +
Sbjct: 389 PMTQQIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKINEPQD---NSNERLVTVTGTEEC 445
Query: 94 ILRAVDLVIDKLLTELH 110
A+ L+ +L +E H
Sbjct: 446 NRMALYLLYARLDSEKH 462
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 16/130 (12%)
Query: 92 DEILRAVDLVIDKLLTELHAEDQ-------------ADDVGTKTKLRLIVPNSSCGSIIG 138
DE+ V D + E A+++ A D + +R ++ + +IIG
Sbjct: 64 DEVSNGVKTEADAVAVEASADEKVAAAAATNSSSAAAHDETSWIHIRAVISSPEAATIIG 123
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY 198
K G + + S A +S G +R++T++G +D +A LI+ L+ + L
Sbjct: 124 KGGENVSNIRKMSNAKCTVSDYQK---GAVERILTVSGIVDAAAKAFGLIIRTLNNEPLT 180
Query: 199 SQTMTVPYTY 208
+ TY
Sbjct: 181 ETSTASSKTY 190
>gi|241025456|ref|XP_002406183.1| poly(rc) binding protein, putative [Ixodes scapularis]
gi|215491885|gb|EEC01526.1| poly(rc) binding protein, putative [Ixodes scapularis]
Length = 398
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK G I F+ +SGA+I +S +RI+ ++G+ + IL+A L+ K
Sbjct: 5 GSIIGKKGDNIKKFREESGAKINISDG-----SCPERIVTVTGSTEAILKAFSLIARKF- 58
Query: 107 TELHAEDQADDV---GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHS 163
E+ ++ LRLIVP S CGS+IGK G+ IK + +++A I+++
Sbjct: 59 EEVSTSSHSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKIKE-IREARASIQVA--SEM 115
Query: 164 YYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSGFHGM 219
+R VT++GT D + + I + E + T+PY V F+G G
Sbjct: 116 LPNSTERAVTVSGTADAITKCIYQICCVMMESP--PKGATIPYRPKPAMPPVIFAG--GQ 171
Query: 220 PYG-----AVPPPVPAVPHNTAAHYGPNMGG 245
Y A+P P H A + P + G
Sbjct: 172 AYTVQGQYAIPHPDLTKLHQLALQHAPLLPG 202
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N L G +IGKGGS IN+ + SGA I++S S E G+ DR + ISGT + I A L
Sbjct: 226 IPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEE---GSKDRTVTISGTPEAINLAQYL 282
Query: 101 VIDKLLTELH 110
+ + ELH
Sbjct: 283 INTSM--ELH 290
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R +V G++IGKGGS I + + AR + + E P +T+R + +SGT D
Sbjct: 76 PVTLRLIVPASQCGSLIGKGGSKIKEIRE---ARASIQVASEMLPNSTERAVTVSGTADA 132
Query: 94 ILRAV 98
I + +
Sbjct: 133 ITKCI 137
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+PN G IIGK G+ I S A IKIS +S G DR VT++GT
Sbjct: 226 IPNDLIGCIIGKGGSKINEIRQLSGATIKIS---NSEEGSKDRTVTISGT 272
>gi|328778258|ref|XP_391921.3| PREDICTED: poly(rC)-binding protein 3-like [Apis mellifera]
Length = 466
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVGT-KTKLRLIVPNSSCGSIIGKAG 141
++G + I +A L+ K ++ H + V LRLIVP S CGS+IGK G
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGG 123
Query: 142 ATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+ IK + + A I+++ L +S +R VT++GT + + + I + E
Sbjct: 124 SKIKEIREVTGASIQVASDMLPNS----TERAVTISGTSEAITQCIYHICCVMLESP--P 177
Query: 200 QTMTVPY 206
+ T+PY
Sbjct: 178 KGATIPY 184
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
V N L G +IGKGG+ I + + SGA I++S E G TDR I I+G D + A
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLAQ 335
Query: 99 DLV 101
L+
Sbjct: 336 YLI 338
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLAQ 335
Query: 186 ELILL--KLSEDTLYSQTMTVP 205
LI + +L + L +Q P
Sbjct: 336 YLISMSVELQKANLEAQNTQTP 357
>gi|238883031|gb|EEQ46669.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 365
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG G I+ ++++ + +SR PG+ +RI+ +SG +D+ +A
Sbjct: 72 RVLVSAKEAGCLIGTNGQVIDSIRNETNTKAGISR---LIPGSHERILTVSGKLDDCAKA 128
Query: 98 VDLVIDKLLTE---------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
+ L+ L + T LRL++PNS G++IG GA I+
Sbjct: 129 LSYFAQALINANIESYNYFPLKQLSSTPNTEETTILRLLIPNSQMGTLIGSKGARIQQLQ 188
Query: 149 DDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSED 195
++ IS + + G N+RLV L GT+D+ +L +I L ED
Sbjct: 189 NN----FNISMIASKSFLPGSNERLVELQGTVDDLYDSLRIISRCLIED 233
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 53/210 (25%)
Query: 22 PVKSLSSDP-TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
P+K LSS P TE+ T +R L+ N G +IG G+ I Q Q+ I + S F PG+
Sbjct: 148 PLKQLSSTPNTEETTILRLLIPNSQMGTLIGSKGARIQ--QLQNNFNISMIASKSFLPGS 205
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-------------------- 120
+R++ + GT+D++ ++ ++++ ED + VGT
Sbjct: 206 NERLVELQGTVDDLYDSL-----RIISRCLIEDFSSIVGTTYYVPRGNTYNNSHSHSHNN 260
Query: 121 ----------------------KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
KT + PN G++IGK G+ I S A+I IS
Sbjct: 261 NNNTNTNNNNNNNNNTHGSGGNKTTDTISFPNDIVGALIGKRGSRIDGVRKVSGAMIAIS 320
Query: 159 RLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
+ G N+R+ T+TG+ +A ++I
Sbjct: 321 ---EAIEGENERVFTITGSSHAVDKAKQMI 347
>gi|68473490|ref|XP_719303.1| hypothetical protein CaO19.13072 [Candida albicans SC5314]
gi|46441115|gb|EAL00415.1| hypothetical protein CaO19.13072 [Candida albicans SC5314]
Length = 369
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG G I+ ++++ + +SR PG+ +RI+ +SG +D+ +A
Sbjct: 74 RVLVSAKEAGCLIGTNGQVIDSIRNETNTKAGISR---LIPGSHERILTVSGKLDDCAKA 130
Query: 98 VDLVIDKLLTE---------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
+ L+ L + T LRL++PNS G++IG GA I+
Sbjct: 131 LSYFAQALINANIESYNYFPLKQLSSTPNTEETTILRLLIPNSQMGTLIGSKGARIQQLQ 190
Query: 149 DDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSED 195
++ IS + + G N+RLV L GT+D+ +L +I L ED
Sbjct: 191 NN----FNISMIASKSFLPGSNERLVELQGTVDDLYDSLRIISRCLIED 235
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 55/212 (25%)
Query: 22 PVKSLSSDP-TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
P+K LSS P TE+ T +R L+ N G +IG G+ I Q Q+ I + S F PG+
Sbjct: 150 PLKQLSSTPNTEETTILRLLIPNSQMGTLIGSKGARIQ--QLQNNFNISMIASKSFLPGS 207
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-------------------- 120
+R++ + GT+D++ ++ ++++ ED + VGT
Sbjct: 208 NERLVELQGTVDDLYDSL-----RIISRCLIEDFSSIVGTTYYVPRGNTYNNNHSHSHSH 262
Query: 121 ------------------------KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
KT + PN G++IGK G+ I S A+I
Sbjct: 263 NNTNNTNINNNNNNNNNTHGSGGNKTTDTISFPNDIVGALIGKRGSRIDGVRKVSGAMIA 322
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
IS + G N+R+ T+TG+ +A ++I
Sbjct: 323 IS---EAIEGENERVFTITGSSHAVDKAKQMI 351
>gi|68473725|ref|XP_719187.1| hypothetical protein CaO19.5627 [Candida albicans SC5314]
gi|46440993|gb|EAL00294.1| hypothetical protein CaO19.5627 [Candida albicans SC5314]
Length = 368
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG G I+ ++++ + +SR PG+ +RI+ +SG +D+ +A
Sbjct: 73 RVLVSAKEAGCLIGTNGQVIDSIRNETNTKAGISR---LIPGSHERILTVSGKLDDCAKA 129
Query: 98 VDLVIDKLLTE---------LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
+ L+ L + T LRL++PNS G++IG GA I+
Sbjct: 130 LSYFAQALINANIESYNYFPLKQLSSTPNTEETTILRLLIPNSQMGTLIGSKGARIQQLQ 189
Query: 149 DDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSED 195
++ IS + + G N+RLV L GT+D+ +L +I L ED
Sbjct: 190 NN----FNISMIASKSFLPGSNERLVELQGTVDDLYDSLRIISRCLIED 234
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 55/212 (25%)
Query: 22 PVKSLSSDP-TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
P+K LSS P TE+ T +R L+ N G +IG G+ I Q Q+ I + S F PG+
Sbjct: 149 PLKQLSSTPNTEETTILRLLIPNSQMGTLIGSKGARIQ--QLQNNFNISMIASKSFLPGS 206
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-------------------- 120
+R++ + GT+D++ ++ ++++ ED + VGT
Sbjct: 207 NERLVELQGTVDDLYDSL-----RIISRCLIEDFSSIVGTTYYVPRGNTYNNNHSHSHSH 261
Query: 121 ------------------------KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
KT + PN G++IGK G+ I S A+I
Sbjct: 262 NNTNNTNINNNNNNNNNTHGSGGNKTTDTISFPNDIVGALIGKRGSRIDGVRKVSGAMIA 321
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
IS + G N+R+ T+TG+ +A ++I
Sbjct: 322 IS---EAIEGENERVFTITGSSHAVDKAKQMI 350
>gi|90652817|ref|NP_001035073.1| uncharacterized protein LOC664755 [Danio rerio]
gi|68533566|gb|AAH98540.1| Zgc:110045 [Danio rerio]
Length = 222
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G + I +
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISDGS-----SPERIVTITGASEVIFK 73
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ +K ++ A V ++ LRL+ P S CGS+IGK G+ IK + + A
Sbjct: 74 AFAMIAEKFEEDILASMINSTVTSRPPVTLRLVFPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L S +R VT++GT + ++ I + E + T+PY
Sbjct: 134 VQVAGDLLPDS----TERAVTISGTPHAITQCVKHICTVMLESP--PKGATIPY 181
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R + G++IGKGGS I + + +GA++Q+ + + P +T+R + ISGT
Sbjct: 100 PVTLRLVFPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDLLPDSTERAVTISGTPHA 157
Query: 94 ILRAVDLVIDKLL 106
I + V + +L
Sbjct: 158 ITQCVKHICTVML 170
>gi|297741005|emb|CBI31317.3| unnamed protein product [Vitis vinifera]
Length = 390
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 9 VPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARI 68
VPS +V ++ T+ +++S + V N G +IGK G TI Q SGA+I
Sbjct: 160 VPSAEVQ-QQPTSETQTMSR---------KMEVPNNKVGVLIGKAGDTIRFLQYNSGAKI 209
Query: 69 QLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVID-----------KLLTELHAEDQADD 117
Q++R + P + R + + G+++ I +A L+ D L+ A QA
Sbjct: 210 QITRDADADPYSASRPVELIGSLENINKAEKLIKDVIAEADAGGSPSLVARGFATAQA-- 267
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK-----ISRLDHSYYGLNDRLV 172
VG ++++ VPN G IIGK G TIKS S A I+ + D S +R V
Sbjct: 268 VGAAEQVQIQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIPQHLPEGDQS----KERTV 323
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGF 216
+TG + A E+I + +Q +P+T+A F G
Sbjct: 324 RVTGDKKQIEMAREMI------KEVMNQIWLLPFTWAQHCFLGV 361
>gi|219116252|ref|XP_002178921.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409688|gb|EEC49619.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 699
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 25/189 (13%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
LV + G +IG+GG I Q+Q+G ++Q+ + HE PG T R I++ G E + A
Sbjct: 253 ILVPTGVVGFIIGRGGENITAMQAQTGVKVQIQKEHELVPGQTTRTILLQGATQESIDAC 312
Query: 99 DLVIDKLLTE-----------LHAEDQADDVGTKTKLRLI-----------VPNSSCGSI 136
+I+ + E L G K+ + VP++ G I
Sbjct: 313 KRIIEAKVQERVRSYNANQSSLQGATGLGGSGKDPKVEMALAAGHQLVEVQVPDADVGLI 372
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
IGK GATIK + A +++ H+ G RL+ +T E + ++ +L +
Sbjct: 373 IGKMGATIKHIQATTGAAVQVP---HAVPGEATRLLQITHPSREGAEQAKRMVQELLDSK 429
Query: 197 LYSQTMTVP 205
++ Q P
Sbjct: 430 IHHQQNEAP 438
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V + G +IGK G+TI Q+ +GA +Q+ + PG R++ I+ E
Sbjct: 360 VEVQVPDADVGLIIGKMGATIKHIQATTGAAVQVPHA---VPGEATRLLQITHPSREGAE 416
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
++ +LL +++H Q ++ ++T + + +P+ G IG+ G I+ + I
Sbjct: 417 QAKRMVQELLDSKIH--HQQNEAPSQTSVEVNIPDRDVGLCIGRQGCVIRHMQSVTNTRI 474
Query: 156 KISRL---DHSYYGLNDRLVTLTGT 177
+I H+Y R+ T+TGT
Sbjct: 475 QIPSQPMPGHTY-----RVATVTGT 494
>gi|198416446|ref|XP_002119674.1| PREDICTED: similar to rCG61051 [Ciona intestinalis]
Length = 465
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 99/184 (53%), Gaps = 13/184 (7%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+ +D + +R L+ G +IGK G+ I F+S+SGARI +S S + P +RI+
Sbjct: 1 MDTDNEDMIITVRMLMIGKEIGGIIGKAGTNIAKFRSESGARITIS-SEQSVP---ERIV 56
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT---KLRLIVPNSSCGSIIGKAGA 142
I+G +I +AV+L+ K+ +++++ + T T +RLIVP S CGSIIGK G
Sbjct: 57 TITGGRGQIHKAVELIAGKMHSDINS--GLSNCATNTVPVTIRLIVPASQCGSIIGKGGV 114
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
IK D + I++ ++R VTL+G + ++++ + + ++T
Sbjct: 115 KIKEIRDTTGCAIQVQ--SEMLPNCSERTVTLSGAPSTILHCIDMLCDVMIQ--YPAKTA 170
Query: 203 TVPY 206
TVP+
Sbjct: 171 TVPF 174
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V N G +IGKGGS I + + SGA+IQ+++ E + DR I I G+ + I A L
Sbjct: 282 VGNEFMGCIIGKGGSRIKEIRMLSGAQIQINKV-EKEDESVDRKITIQGSAEAISLAYYL 340
Query: 101 V 101
+
Sbjct: 341 I 341
>gi|149728835|ref|XP_001494599.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Equus
caballus]
Length = 403
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 23/200 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPTNGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAV 224
V S G YGAV
Sbjct: 189 GTVLLSANQGFSVQGQYGAV 208
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTSAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|190347114|gb|EDK39328.2| hypothetical protein PGUG_03426 [Meyerozyma guilliermondii ATCC
6260]
Length = 342
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 28/186 (15%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG+ G I+ + ++ + +SR PG+ +RI+ +SGT+D+ RA
Sbjct: 63 RVLVSAKEAGCLIGQNGQVIDSIRQETNTKAGISR---LQPGSHERILTVSGTLDDAARA 119
Query: 98 VDLVIDKL---------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
+ L L +L + + G T LRL++PN+ G++IG G
Sbjct: 120 LSYFAQALCNANTETFSTYSYFPLKQLSSTPCVE--GETTILRLLIPNAQMGTLIGSKGV 177
Query: 143 TIKSFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
I+ QA IS + + G N+RLV L GT+++ L +I L ED +S
Sbjct: 178 RIQQI----QANFHISMIASKSFLPGSNERLVELQGTVNDLYDTLRVISRCLIED--FSS 231
Query: 201 TMTVPY 206
+T Y
Sbjct: 232 IVTTSY 237
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 27/195 (13%)
Query: 22 PVKSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P+K LSS P + T +R L+ N G +IG G I Q Q+ I + S F PG
Sbjct: 142 PLKQLSSTPCVEGETTILRLLIPNAQMGTLIGSKGVRIQ--QIQANFHISMIASKSFLPG 199
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV-----GTKTKLR--------- 125
+ +R++ + GT++++ + VI + L E + G TK R
Sbjct: 200 SNERLVELQGTVNDLYDTLR-VISRCLIEDFSSIVTTSYYIPRGGNTTKYRGTDRRSSSP 258
Query: 126 -----LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
L PN G++IGK G+ I+ S A I IS G +R T++G+
Sbjct: 259 GISTTLYFPNEIVGALIGKNGSRIQGVRKVSGASIGIS---EEVDGKTEREFTISGSSHA 315
Query: 181 QMRALELILLKLSED 195
+A +L+ L +
Sbjct: 316 VEKAKDLLYHNLERE 330
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 103 DKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
+K+ T L + + + R++V G +IG+ G I S ++ ISRL
Sbjct: 41 EKVSTSLPSVEDMSNASALINYRVLVSAKEAGCLIGQNGQVIDSIRQETNTKAGISRLQP 100
Query: 163 SYYGLNDRLVTLTGTLDEQMRAL 185
G ++R++T++GTLD+ RAL
Sbjct: 101 ---GSHERILTVSGTLDDAARAL 120
>gi|154319404|ref|XP_001559019.1| hypothetical protein BC1G_02183 [Botryotinia fuckeliana B05.10]
Length = 453
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 26/224 (11%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++++ A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 127 HVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVS---DYQKGAVERILTVSGVVDAVA 183
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E E +D LRL++P+ GSIIGK G IK + S A +
Sbjct: 184 KAFGLIIRTLNNE-PLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARL 242
Query: 156 KISRLDHSYYGLN-DRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
S SY L+ +R + + G D A+ + + TL+ Q A ++
Sbjct: 243 NAS---DSYLPLSTERSLVVLGVAD----AVHIATYYVG-STLFEQLTERFGGPAASAYA 294
Query: 215 GFHGMPYGAVPPPVP------------AVP-HNTAAHYGPNMGG 245
G P G VP +P +P H T H P +GG
Sbjct: 295 SRSGGPAGVVPGAMPNHTVKDRHLTNSQLPLHITGGHASPAVGG 338
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGKGG I + Q SGAR+ S S
Sbjct: 190 IRTLNNEPLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARLNASDS-- 247
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
+ P +T+R +++ G D + A V L +L
Sbjct: 248 YLPLSTERSLVVLGVADAVHIATYYVGSTLFEQL 281
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 380 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNS----NERLVTITGTAECNQM 435
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 436 ALYMLYSRLESE 447
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 375 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NSNERLVTITGTAE 431
Query: 93 EILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 432 CNQMALYMLYSRLESERH 449
>gi|348519759|ref|XP_003447397.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Oreochromis niloticus]
Length = 581
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI D Q+ +++ + R G ++ I I T +
Sbjct: 201 LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKEN--AGAAEKPITIHSTPEGCSA 258
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A +++D + E + +D+ L+++ NS G +IGK G +K +D+ I
Sbjct: 259 ACRMILDIMQKEANETKTTEDI----PLKILAHNSLVGRLIGKEGRNLKKIEEDTGTKIT 314
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---YT 207
IS L +R +T+ G++D +A I KL E + Q +P
Sbjct: 315 ISSLQDLTIYNPERTITVKGSIDACCKAEVEITKKLREAYENDIAAINQQANLIPGLNLN 374
Query: 208 YAGVFFSGFHGMPYGAVP-PPVPAV 231
G+F SG +P A P VPAV
Sbjct: 375 ALGIFSSGLPVLPPAAGPRSAVPAV 399
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS 71
P G RS P + P ++ Y+ + GA+IGK G I +GA I+++
Sbjct: 387 PPAAGPRSAVPAVAPQQAPEQEVVYL--FIPTQAVGALIGKKGQHIKQLAHFAGASIKIA 444
Query: 72 RSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVP 129
+ P T+R+++I+GT + +A + KL E A+++ K + + VP
Sbjct: 445 PAES--PDVTERMVIITGTPEAQFKAQGRIFGKLKEENFFSAKEE-----VKLETHIKVP 497
Query: 130 NSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
+S+ G +IGK G T+ + + A + + R
Sbjct: 498 SSAAGRVIGKGGKTVNELQNLTSAEVIVPR 527
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 81/205 (39%), Gaps = 45/205 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + +G +I +S + +R I + G+ID +
Sbjct: 282 LKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNPERTITVKGSIDACCK 341
Query: 97 AVDLVIDKLLTELHAEDQA----------------------------------------- 115
A ++ I K L E + D A
Sbjct: 342 A-EVEITKKLREAYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPRSAVPAVA 400
Query: 116 -DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
+ + L +P + G++IGK G IK + A IKI+ + + +R+V +
Sbjct: 401 PQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESP--DVTERMVII 458
Query: 175 TGTLDEQMRALELILLKLSEDTLYS 199
TGT + Q +A I KL E+ +S
Sbjct: 459 TGTPEAQFKAQGRIFGKLKEENFFS 483
>gi|326505208|dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
+ R LV GA+IG+ G I QS ARI++ + PG T+R ++IS
Sbjct: 114 SVFRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKIL---DGPPGVTERAVIISAKDEPD 170
Query: 90 -----TIDEILRAVDLVIDKLLTEL-HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGAT 143
+D +LR + D E + A +VG RL+VP S GS+IGK GAT
Sbjct: 171 EPISPAMDGLLRIHKRITDGSDGEFGQPQRGASNVGP---TRLLVPASQAGSLIGKQGAT 227
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
IKS D S++V++I +DR+V + G +A+ELI L
Sbjct: 228 IKSIQDSSKSVVRIVENVPPVALNDDRVVEIQGEPLGVHKAVELIANHL 276
>gi|432092458|gb|ELK25073.1| Poly(rC)-binding protein 4 [Myotis davidii]
Length = 403
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK----LRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
AV ++ KL +L + + GT ++ LRL++P S CGS+IGKAG IK + +
Sbjct: 75 AVSMIAFKLDEDLCSAPA--NGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTG 132
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY---- 206
A ++++ L +S +R VT++G D + + I + E + T+PY
Sbjct: 133 AQVQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSL 186
Query: 207 TYAGVFFSGFHGMP----YGAVPP 226
+ V S G YG V P
Sbjct: 187 SLGTVLLSANQGFSVQSQYGGVTP 210
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V ++ TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQSQYGGVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFGSPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|255561653|ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis]
gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1, putative [Ricinus communis]
Length = 544
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T R + + G VIGKGG TI + Q QSGA+IQ+++ + P + R + + GT ++I
Sbjct: 86 TSKRITIPSGKVGVVIGKGGETIKNIQLQSGAKIQITKDQDADPHSLTRDVELMGTSEQI 145
Query: 95 LRAVDLVIDKLLTELHAEDQADDV--GTKTK------LRLIVPNSSCGSIIGKAGATIKS 146
RA +L+ D ++ E A A G TK + VPN G +IGK G TIK
Sbjct: 146 SRAEELIND-VIAETDAGGSASSAVHGLNTKQPGAEQFSIRVPNDKVGLLIGKGGETIKY 204
Query: 147 FMDDSQAVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELI 188
S A ++I L H G +R V + G ++ A EL+
Sbjct: 205 MQSRSGARMQIIPL-HLPPGDPTTERTVYINGLTEQIEAAKELV 247
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Query: 13 DVHGKRSTAPVKSLSSDPTEKPTYIRF--LVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
D G S+A V L+ T++P +F V N G +IGKGG TI QS+SGAR+Q+
Sbjct: 160 DAGGSASSA-VHGLN---TKQPGAEQFSIRVPNDKVGLLIGKGGETIKYMQSRSGARMQI 215
Query: 71 SRSHEFFPG--TTDRIIMISGTIDEILRAVDLVIDKL 105
H PG TT+R + I+G ++I A +LV D L
Sbjct: 216 IPLH-LPPGDPTTERTVYINGLTEQIEAAKELVNDVL 251
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 110 HAEDQADDVGTK-TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGL 167
+A Q+ G++ T R+ +P+ G +IGK G TIK+ S A I+I++ D + L
Sbjct: 73 YASQQSQYHGSQGTSKRITIPSGKVGVVIGKGGETIKNIQLQSGAKIQITKDQDADPHSL 132
Query: 168 NDRLVTLTGTLDEQMRALELI 188
R V L GT ++ RA ELI
Sbjct: 133 T-RDVELMGTSEQISRAEELI 152
>gi|357157425|ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 527
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
+ R LV GAVIG+ G I +S ARI++ + PG +R +MIS
Sbjct: 126 SVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKIL---DGPPGVPERAVMISAKDEPD 182
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+D +LR + D L +E + G RL+VP S GS+IGK GATI
Sbjct: 183 ALVSPAVDGLLRVHKRITDGLDSETDQPQRG--AGPVGPTRLLVPASQAGSLIGKQGATI 240
Query: 145 KSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
KS D S+ ++I +DR+V + G + +A+ELI L
Sbjct: 241 KSIQDASKCALRILENVPPVALNDDRVVEIQGEPLDVHKAVELIASHL 288
>gi|255550830|ref|XP_002516463.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544283|gb|EEF45804.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 306
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 31/219 (14%)
Query: 1 METNESSYVPSPDVHGKRSTAP---VKSLS-SDPTEKP----TYI-----RFLVSNPLAG 47
++ N +S S D + S+AP +KSLS S P+ P TY+ + + N G
Sbjct: 93 VDNNGASGFDSNDNNKGFSSAPPNDLKSLSNSAPSAIPVSYGTYLGSSSKKIEIPNGRVG 152
Query: 48 AVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLT 107
+IGKGG TI Q QSGA+IQ++R + P + R++ + G D+I +A ++L++
Sbjct: 153 VIIGKGGETIKYLQIQSGAKIQVTRDMDADPNSPTRMVELMGNPDQIAKA-----EQLIS 207
Query: 108 ELHAEDQADDVGTKTK----------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
E+ AE GT ++ + +PN+ G +IGK G +IK+ + A I++
Sbjct: 208 EVLAEADVGGSGTVSRRFTGQGGSEHFVMKIPNNKVGLVIGKGGDSIKNMQARTGARIQV 267
Query: 158 SRLDHSYYG--LNDRLVTLTGTLDEQMRALELILLKLSE 194
L H G DR V + GT ++ A +L+ +SE
Sbjct: 268 IPL-HLPPGDTSTDRNVHIEGTSEQIELAKQLVNEAISE 305
>gi|116784616|gb|ABK23409.1| unknown [Picea sitchensis]
Length = 407
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS--GTIDEIL 95
R +V++ G VIGK GS IN + +GARI+++ + DR+I+IS G +E
Sbjct: 96 RIVVASNKIGKVIGKQGSKINQLREDTGARIKIA---DPVTPLEDRVIIISSKGEEEEET 152
Query: 96 RAVDLVIDKLLT---ELHAEDQAD-DVGTK----TKLRLIVPNSSCGSIIGKAGATIKSF 147
A + + ++ T E E A VGT+ +RL++ S GS+IG +G TIK
Sbjct: 153 SAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGSLIGASGKTIKEI 212
Query: 148 MDDSQAVIKISRLDHS----YYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+DS A IKI + S DRLV ++G + + ++AL+ I + L E T
Sbjct: 213 RNDSGATIKILPQNLSPICASASETDRLVQISGEVSQVLKALDHIGVTLREHPPREVIST 272
Query: 204 VPYTYAGVF-FSGFHGMPYGAVP 225
P YAG+ +G +P +P
Sbjct: 273 RPTYYAGLSPANGLMVLPQTVLP 295
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP-----GTTDRIIMIS 88
P +R L++ AG++IG G TI + ++ SGA I++ P TDR++ IS
Sbjct: 186 PNMMRLLIAGSQAGSLIGASGKTIKEIRNDSGATIKI-LPQNLSPICASASETDRLVQIS 244
Query: 89 GTIDEILRAVD 99
G + ++L+A+D
Sbjct: 245 GEVSQVLKALD 255
>gi|147818796|emb|CAN67284.1| hypothetical protein VITISV_021596 [Vitis vinifera]
Length = 332
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + N G +IGKGG TI Q QSGA+IQ++R + P + R++ + GT D+I
Sbjct: 97 TSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQI 156
Query: 95 LRAVDLVIDKLLTELHAEDQA-------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+A L+ D +L+E A G++ + + VPN+ G IIGK G TIK+
Sbjct: 157 AKAEQLIND-VLSEAEAGGSGIVSRRLTGQAGSE-QFVMKVPNNKVGLIIGKGGETIKNM 214
Query: 148 MDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
+ A I++ L D S +R V + GT ++ A +L+ +SE
Sbjct: 215 QARTGARIQVIPLHLPPGDTSM----ERTVQIDGTSEQIESAKQLVNEVISE 262
>gi|449551271|gb|EMD42235.1| hypothetical protein CERSUDRAFT_110766 [Ceriporiopsis subvermispora
B]
Length = 324
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 11/183 (6%)
Query: 17 KRSTAPVKSLSSDPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+ S +P S S P +R LVS AG +IGK G + D + +G + +S+
Sbjct: 9 RESGSPAHSRSPSPVGNEVLTLRALVSTKDAGVIIGKAGKNVADLRDHTGVKAGVSK--- 65
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV-GTKTKLRLIVPNSSCG 134
PG +R++ +SG+++ + +A L++ +L+ + + V +T +RL++ ++ G
Sbjct: 66 VIPGVHERVLTVSGSVEGVAKAYALIVSQLVAANPSSPVSPTVPSQQTAIRLLISHNLMG 125
Query: 135 SIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
S+IG+ G IK+ D S A + S+ L S +R+V + G D RA+E I L
Sbjct: 126 SVIGRNGLKIKAIQDASGARMVASKDMLPQS----TERIVEVQGASDSIGRAIEEIGRCL 181
Query: 193 SED 195
ED
Sbjct: 182 LED 184
>gi|327275834|ref|XP_003222677.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Anolis carolinensis]
Length = 576
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 21/220 (9%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S APVK P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 185 SGAPVKQ---QPVDIP--LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--A 237
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
G ++ I I T + A ++++ + E AD+V L+++ N+ G +IG
Sbjct: 238 GAAEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEV----PLKILAHNNFVGRLIG 293
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE---- 194
K G +K D++ I IS L +R +T+ G+++ RA + I+ K+ E
Sbjct: 294 KEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCRAEQEIMKKVREAYEN 353
Query: 195 --DTLYSQTMTVP-YTYAGVFFSGFHGMPYGAVPPPVPAV 231
+ Q+ +P A V G AVPPP +V
Sbjct: 354 DVAAMSLQSHLIPGLNLAAV---GLFPASSNAVPPPPSSV 390
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P E+ T F+ + + GA+IGK G I + A I+++ + P + R+++I+G
Sbjct: 401 PPEQETVHVFIPAQAV-GAIIGKKGQHIKQLSRFASASIKIAPAE--TPDSKVRMVIITG 457
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ +A + KL E + ++V +T +R VP S+ G +IGK G T+ +
Sbjct: 458 PPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGKGGKTVNELQN 514
Query: 150 DSQAVIKISR 159
+ A + + R
Sbjct: 515 LTAAEVVVPR 524
>gi|432934409|ref|XP_004081928.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Oryzias latipes]
Length = 600
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 21/231 (9%)
Query: 15 HGKRSTAPVKSLSS-DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRS 73
+G P S SS P ++ +R LV GA+IGK G TI + Q+ +++ + R
Sbjct: 167 YGAPQPGPSGSYSSPRPRQQDFPLRILVPTQFVGAIIGKEGLTIKNVTKQTQSKVDIHRK 226
Query: 74 HEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSC 133
G ++ I I T + A +++D + E + +++ L+++ NS
Sbjct: 227 ENA--GAAEKPITIHSTPEGCSSACRMILDIMQKEANETKTNEEI----PLKILAHNSLV 280
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G +IGK G +K +++ I IS L +R +T+ G+L+ +A I+ KL
Sbjct: 281 GRLIGKEGRNLKKIEEETGTKITISSLQDLTICNPERTITVKGSLEACCKAEVEIMKKLK 340
Query: 194 E------DTLYSQTMTVP---YTYAGVFFSGFHGMP-----YGAVPPPVPA 230
E + Q +P G+F SG +P GAVPP PA
Sbjct: 341 EAYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGSRGAVPPMPPA 391
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S P + P ++ Y+ + GA+IGK G I +GA I+++ + P
Sbjct: 413 SAIPHQHSQQAPEQEVVYL--FIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAES--P 468
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSI 136
T+R+++I+GT + +A + KL E A+++ K + + VP+S+ G +
Sbjct: 469 DVTERMVIITGTPEAQFKAQGRIFGKLKEENFFSAKEE-----VKLETHIKVPSSAAGRV 523
Query: 137 IGKAGATIKSFMDDSQAVIKISR 159
IGK G T+ + + A + + R
Sbjct: 524 IGKGGKTVNELQNLTSAEVIVPR 546
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G++IGK G IK + A IKI+ + + +R+V +TGT + Q +A
Sbjct: 431 LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESP--DVTERMVIITGTPEAQFKAQ 488
Query: 186 ELILLKLSEDTLYSQTMTV 204
I KL E+ +S V
Sbjct: 489 GRIFGKLKEENFFSAKEEV 507
>gi|296189557|ref|XP_002742821.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Callithrix
jacchus]
Length = 375
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI++ + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK-TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A ++I KL ++++ ++ LRL+VP + CGS+IGK G IK + A +
Sbjct: 71 AFAMIIYKLEEDINSSMTKSTAASRLVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQV 130
Query: 156 KIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
+++ L +S +R +T+ G + ++ I L + E +S
Sbjct: 131 QVAGDMLPNS----TERAITIAGVPQSVTKCVKQICLVMLETLSHS 172
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G ++K +S A IKI + +R++TLTG + +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEGN-----CPERIITLTGPTNAIFK 70
Query: 184 ALELILLKLSEDTLYSQT 201
A +I+ KL ED S T
Sbjct: 71 AFAMIIYKLEEDINSSMT 88
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +V G++IGKGG I + + +GA++Q++ + P +T+R I I+G + +
Sbjct: 99 LRLVVPATQCGSLIGKGGCKIKEIRKSTGAQVQVA--GDMLPNSTERAITIAGVPQSVTK 156
Query: 97 AVDLVIDKLLTELHAEDQA 115
V + +L L Q
Sbjct: 157 CVKQICLVMLETLSHSPQG 175
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 263 SPEVKGYWA-------SLDASTQITH-ELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKI 314
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
+ E G++ R + I+G+ I A L+ +L +E + VG+
Sbjct: 315 ANPVE---GSSGRQVTITGSAASISLAQYLIKARLSSEKGMGCSWNSVGS 361
>gi|70989551|ref|XP_749625.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
gi|66847256|gb|EAL87587.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
Length = 464
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 3 TNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQS 62
+ E+ + S HG+R+T+ + +IR ++S+ A VIGKGG ++ +
Sbjct: 80 STETQPIQSTASHGERATSQPEQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRR 139
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT 122
SGA+ +S ++ G +RI+ +SG D + +A L+I L E D +KT
Sbjct: 140 LSGAKCTVS---DYSRGAVERILTVSGPQDAVAKAFGLIIRTLNNE--PLDAPSTAQSKT 194
Query: 123 -KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
LRL++P+ GSIIGK G+ I+ + S A + S
Sbjct: 195 YPLRLLIPHLLIGSIIGKGGSRIREIQEASGARLNAS 231
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P + P TY +R L+ + L G++IGKGGS I + Q SGAR+ S S
Sbjct: 176 IRTLNNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEASGARLNASDS-- 233
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +++R ++I G D + A V L+ +L
Sbjct: 234 CLPLSSERSLVILGVADSVHIATYYVAVTLVEQL 267
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT + A
Sbjct: 399 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENS---NERLVTITGTQECNQMA 455
Query: 185 LELILLKL 192
L ++ +L
Sbjct: 456 LYMLYSRL 463
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ E + +R++ I+GT +
Sbjct: 394 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE---NSNERLVTITGTQE 450
Query: 93 EILRAVDLVIDKL 105
A+ ++ +L
Sbjct: 451 CNQMALYMLYSRL 463
>gi|115497150|ref|NP_001068751.1| poly(rC)-binding protein 4 [Bos taurus]
gi|119390858|sp|Q0VCU0.1|PCBP4_BOVIN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|111304931|gb|AAI20010.1| Poly(rC) binding protein 4 [Bos taurus]
gi|296474781|tpg|DAA16896.1| TPA: poly(rC)-binding protein 4 [Bos taurus]
Length = 403
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++G D + + I + E + T+PY
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPY 182
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|449525363|ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g18375-like, partial
[Cucumis sativus]
Length = 531
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+S P + +R L G VIGKGG TI + SGAR+++ + D I
Sbjct: 299 ISGHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKR----DCDECI 354
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ + + + + ++ +L L E DD G +RL++P+ G IIGK+G+ I
Sbjct: 355 ITISSFESLDDLKSMAVETVL--LLQEKINDDEGGTVIMRLLIPSKVIGCIIGKSGSIIN 412
Query: 146 SFMDDSQAVIKISRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
++A I+IS+ D +D LV +TG + AL I+L+L +D L + +
Sbjct: 413 EIRKSTRADIRISKGDKLKCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDV 470
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 27/172 (15%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI-DEILR 96
R L + + G+VIGK G IN + ++ A+I++ + FPG DR+I I + D+
Sbjct: 39 RILCPDEVIGSVIGKSGKVINSIRQETRAKIKVV---DPFPGAKDRVITIFCFVKDKEDV 95
Query: 97 AVDLVIDKLLTELHAEDQADDV------------------GTKTKLRLIVPNSSCGSIIG 138
VD + T A+D V K + ++++P+S ++IG
Sbjct: 96 EVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQRDKEQCQILIPSSQSANVIG 155
Query: 139 KAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTGTLDEQMRAL 185
KAG+TIK ++ IKIS D HS D + G + RAL
Sbjct: 156 KAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEGVRRAL 207
>gi|119480179|ref|XP_001260118.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
gi|119408272|gb|EAW18221.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
Length = 464
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 3 TNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQS 62
+ E+ + S HG+R+T+ + +IR ++S+ A VIGKGG ++ +
Sbjct: 80 STETQPIQSTASHGERATSQPEQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRR 139
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT 122
SGA+ +S ++ G +RI+ +SG D + +A L+I L E D +KT
Sbjct: 140 LSGAKCTVS---DYSRGAVERILTVSGPQDAVAKAFGLIIRTLNNE--PLDAPSTAQSKT 194
Query: 123 -KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
LRL++P+ GSIIGK G+ I+ + S A + S
Sbjct: 195 YPLRLLIPHLLIGSIIGKGGSRIREIQEASGARLNAS 231
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P + P TY +R L+ + L G++IGKGGS I + Q SGAR+ S S
Sbjct: 176 IRTLNNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEASGARLNASDS-- 233
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +++R ++I G D + A V L+ +L
Sbjct: 234 CLPLSSERSLVILGVADSVHIATYYVAVTLVEQL 267
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT + A
Sbjct: 399 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENS---NERLVTITGTQECNQMA 455
Query: 185 LELILLKL 192
L ++ +L
Sbjct: 456 LYMLYSRL 463
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ E + +R++ I+GT +
Sbjct: 394 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE---NSNERLVTITGTQE 450
Query: 93 EILRAVDLVIDKL 105
A+ ++ +L
Sbjct: 451 CNQMALYMLYSRL 463
>gi|354542956|emb|CCE39674.1| hypothetical protein CPAR2_600900 [Candida parapsilosis]
Length = 375
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 25/189 (13%)
Query: 22 PVKSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P+K LSS P + T +R L+ N G +IG G+ I Q G I + S F PG
Sbjct: 188 PLKQLSSTPCVEHETTILRLLIPNSQMGTLIGAKGARIQQIQHNFG--ISMIASKSFLPG 245
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-------------KTKLRL 126
+ +R++ + GT+D++ A+ ++ L+ ED + VGT K+ +
Sbjct: 246 SNERLVELQGTVDDLYDALRIISRCLI-----EDFSSSVGTTTYYVPKSHQSTRKSTATI 300
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALE 186
PN G++IGK G+ I+ S A+I I + G ++R+ T+TGT +A
Sbjct: 301 SFPNDMVGALIGKNGSRIQGVRKVSGAMIGIG---EAVEGSDERVFTITGTQQAVEKAKS 357
Query: 187 LILLKLSED 195
L+ L +
Sbjct: 358 LLYHNLERE 366
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG+ G I+ + ++ + +SR GT +RI+ +SG +D+ +A
Sbjct: 112 RVLVSAKEAGCLIGQNGKVIDSIREETNTKAGISR---LIAGTHERILTVSGKLDDCAKA 168
Query: 98 VDLVIDKLLTE---------LHAEDQADDVGTKTK-LRLIVPNSSCGSIIGKAGATIKSF 147
+ LL L V +T LRL++PNS G++IG GA I+
Sbjct: 169 LSYFAQALLGSSIETYNYFPLKQLSSTPCVEHETTILRLLIPNSQMGTLIGAKGARIQQI 228
Query: 148 MDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
Q IS + + G N+RLV L GT+D+ AL +I L ED S T
Sbjct: 229 ----QHNFGISMIASKSFLPGSNERLVELQGTVDDLYDALRIISRCLIEDFSSSVGTTTY 284
Query: 206 Y 206
Y
Sbjct: 285 Y 285
>gi|358056167|dbj|GAA97907.1| hypothetical protein E5Q_04587 [Mixia osmundae IAM 14324]
Length = 531
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 34/206 (16%)
Query: 11 SPDVHGKRST---APVKSLSSDP---TEKPTYI-RFLVSNPLAGAVIGKGGSTINDFQSQ 63
SP V K AP++S ++ P E PT I R LVS+ AG VIG+ G + D + +
Sbjct: 112 SPAVQPKEDAPPQAPIRSQAASPPGQAEAPTLIMRALVSSREAGIVIGRQGKNVADIREK 171
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV----- 118
+ + +S+ PG ++R++ ++G I + RA L+ ++ D + +
Sbjct: 172 AQVKAGVSK---LVPGVSERVLTVTGQISGVARAFGLICQTIM------DNSSGIPNDSP 222
Query: 119 -------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLND 169
G+ LRL++ ++ G +IGKAG IKS S + S+ L S +
Sbjct: 223 STYTGLSGSTLTLRLLISSAQMGGVIGKAGTKIKSIQQTSGTRMAASKELLPQS----TE 278
Query: 170 RLVTLTGTLDEQMRALELILLKLSED 195
RLV ++G ++ +A+ I L ED
Sbjct: 279 RLVEISGRPEQVEKAVAEIAKALVED 304
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+S+ G VIGK G+ I Q SG R+ S+ E P +T+R++ ISG +++ +
Sbjct: 235 LRLLISSAQMGGVIGKAGTKIKSIQQTSGTRMAASK--ELLPQSTERLVEISGRPEQVEK 292
Query: 97 AVDLVIDKLLTELHAEDQADDVGT 120
AV + L+ ED+A VGT
Sbjct: 293 AVAEIAKALV-----EDEAKAVGT 311
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR-SHEF 76
R+ A + S + P + + + G +IGKGG IND + SG++I +++ +H+
Sbjct: 422 RANASIASAAHAPDPNLRTQNISIPSDMVGCIIGKGGQKINDIRKSSGSKISIAKTAHDE 481
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLR 125
T +R+ I+GT A+ L+ +L E + D+ G + R
Sbjct: 482 ---TGERMFTITGTAQNNETALFLLYGQLENEKERRLRMDEEGGVGRQR 527
>gi|33150676|gb|AAP97216.1|AF092441_1 CBP [Homo sapiens]
Length = 397
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 23/200 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S F +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG-SFL----ERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IG+AG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQ 134
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY----TY 208
++++ + +R VT++G D A+ L + ++ L S + T+PY +
Sbjct: 135 VQVA--GDLFPNSTERAVTVSGVPD----AIILCVRQICAVILESPPKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAV 224
V S G YGAV
Sbjct: 189 GTVLLSANQGFSVQGQYGAV 208
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IG+ G+ I + + +GA++Q+ + + FP +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQVQV--AGDLFPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTQREVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>gi|449433573|ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 625
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
+S P + +R L G VIGKGG TI + SGAR+++ + D I
Sbjct: 299 ISGHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKR----DCDECI 354
Query: 86 MISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ + + + + ++ +L L E DD G +RL++P+ G IIGK+G+ I
Sbjct: 355 ITISSFESLDDLKSMAVETVL--LLQEKINDDEGGTVIMRLLIPSKVIGCIIGKSGSIIN 412
Query: 146 SFMDDSQAVIKISRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
++A I+IS+ D +D LV +TG + AL I+L+L +D L + +
Sbjct: 413 EIRKSTRADIRISKGDKLKCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDV 470
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 27/172 (15%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI-DEILR 96
R L + + G+VIGK G IN + ++ A+I++ + FPG DR+I I + D+
Sbjct: 39 RILCPDEVIGSVIGKSGKVINSIRQETRAKIKVV---DPFPGAKDRVITIFCFVKDKEDV 95
Query: 97 AVDLVIDKLLTELHAEDQADDVGT------------------KTKLRLIVPNSSCGSIIG 138
VD + T A+D V K + ++++P+S ++IG
Sbjct: 96 EVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQRDKEQCQILIPSSQSANVIG 155
Query: 139 KAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTGTLDEQMRAL 185
KAG+TIK ++ IKIS D HS D + G + RAL
Sbjct: 156 KAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEGVRRAL 207
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P+ + L+ AG VIGKGG+ I + + SGA I++S S DRI +ISGT ++
Sbjct: 554 PSSLEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKS---SRGDRIALISGTSEQ 610
Query: 94 ILRAVDLV 101
A +L+
Sbjct: 611 KRTAENLI 618
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
+ L +++P ++ G +IGK GA I + S A+I+IS S DR+ ++GT +++
Sbjct: 555 SSLEMLIPANAAGKVIGKGGANIANIRKISGALIEIS---DSKSSRGDRIALISGTSEQK 611
Query: 182 MRALELI 188
A LI
Sbjct: 612 RTAENLI 618
>gi|159129031|gb|EDP54145.1| KH domain RNA binding protein [Aspergillus fumigatus A1163]
Length = 464
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 3 TNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQS 62
+ E+ + S HG+R+T+ + +IR ++S+ A VIGKGG ++ +
Sbjct: 80 STETQPIQSTASHGERATSQPEQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRR 139
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT 122
SGA+ +S ++ G +RI+ +SG D + +A L+I L E D +KT
Sbjct: 140 LSGAKCTVS---DYSRGAVERILTVSGPQDAVAKAFGLIIRTLNNE--PLDAPSTAQSKT 194
Query: 123 -KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
LRL++P+ GSIIGK G+ I+ + S A + S
Sbjct: 195 YPLRLLIPHLLIGSIIGKGGSRIREIQEASGARLNAS 231
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P + P TY +R L+ + L G++IGKGGS I + Q SGAR+ S S
Sbjct: 176 IRTLNNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEASGARLNASDS-- 233
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +++R ++I G D + A V L+ +L
Sbjct: 234 CLPLSSERSLVILGVADSVHIATYYVAVTLVEQL 267
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT + A
Sbjct: 399 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENS---NERLVTITGTQECNQMA 455
Query: 185 LELILLKL 192
L ++ +L
Sbjct: 456 LYMLYSRL 463
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ E + +R++ I+GT +
Sbjct: 394 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE---NSNERLVTITGTQE 450
Query: 93 EILRAVDLVIDKL 105
A+ ++ +L
Sbjct: 451 CNQMALYMLYSRL 463
>gi|398389867|ref|XP_003848394.1| hypothetical protein MYCGRDRAFT_111290 [Zymoseptoria tritici
IPO323]
gi|339468269|gb|EGP83370.1| hypothetical protein MYCGRDRAFT_111290 [Zymoseptoria tritici
IPO323]
Length = 879
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+ A VIGKGG + + +GA+ +S E+ G +RI+ +SG +D +
Sbjct: 136 HVRAIISSAEAATVIGKGGENVTQIRKMAGAKCTVS---EYTRGAVERILTVSGLVDAVA 192
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E DQ +KT LRL++P+ GSIIGK G I+ + S A
Sbjct: 193 KAFGLIIRTLNQE--PLDQPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGAR 250
Query: 155 IKIS 158
+ S
Sbjct: 251 LNAS 254
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G ++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT
Sbjct: 417 GQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNN---NERLVTITGTQ 473
Query: 179 DEQMRALELILLKL 192
+ AL ++ +L
Sbjct: 474 ECNQMALYMLYSRL 487
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+ +P ++P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 199 IRTLNQEPLDQPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASES-- 256
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R +++ G D + A V L+ +L
Sbjct: 257 CLPLSTERSLVVLGVADAVHIATYYVGSTLVEQL 290
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + +R++ I+GT +
Sbjct: 418 QPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NNNERLVTITGTQE 474
Query: 93 EILRAVDLVIDKL-----LTELHAEDQADDVGTK 121
A+ ++ +L L D D+ G +
Sbjct: 475 CNQMALYMLYSRLVPTGVLPTRQTADARDEQGVR 508
>gi|255932595|ref|XP_002557854.1| Pc12g10310 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582473|emb|CAP80658.1| Pc12g10310 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 473
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 90/171 (52%), Gaps = 20/171 (11%)
Query: 2 ETNESSYVP-SPDVHGKRSTAPVKSLSSD---------PTEKPTY--IRFLVSNPLAGAV 49
+T + VP +P+ G T P++S +S P ++ ++ IR ++S+P A V
Sbjct: 62 DTQGDTVVPDAPNGKGLPDTQPIQSTASQADRAASDQPPQDESSWVHIRAVISSPEAATV 121
Query: 50 IGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE- 108
IGKGG ++ + SGA+ +S ++ G +RI+ +SG D +A L+I L E
Sbjct: 122 IGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAAAKAFGLIIRTLNNEP 178
Query: 109 LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
L A A +KT LRL++P+ GSIIGK G+ I+ + S A + S
Sbjct: 179 LEAASTAQ---SKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNAS 226
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTE------KPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E TY +R L+ + L G++IGKGGS I + Q SGAR L+ S
Sbjct: 171 IRTLNNEPLEAASTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGAR--LNASDA 228
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 229 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQL 262
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +PN G+IIGK GA I S +VIKI+ S N+RLVT+TGT + A
Sbjct: 396 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQESS---NERLVTITGTAECNQMA 452
Query: 185 LELILLKL 192
L ++ +L
Sbjct: 453 LYMLYSRL 460
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 8 YVPSPDVHGKRSTAPVKSLSSDPTE-------KPTYIRFLVSNPLAGAVIGKGGSTINDF 60
+ P+P V G + P + + P +P + + N + GA+IGKGG+ IN+
Sbjct: 359 HQPAPFVGGPQQPTPGRGPPTAPAPVGAAMPGQPLTQQIYIPNDMVGAIIGKGGAKINEI 418
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ SG+ I+++ E + +R++ I+GT + A+ ++ +L
Sbjct: 419 RHLSGSVIKINEPQE---SSNERLVTITGTAECNQMALYMLYSRL 460
>gi|449281891|gb|EMC88850.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 330
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 17/176 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTIND--FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
IR L+ G++IGK + F QSGARI +S + +RI+ I+G D I
Sbjct: 16 IRLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISEGN-----CPERIVTITGPTDAI 70
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
+A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + +
Sbjct: 71 FKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 130
Query: 153 AVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
A ++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 131 AQVQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 180
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 25 SLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S S+ ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +T+R
Sbjct: 90 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 147
Query: 85 IMISGTIDEILRAVDLVIDKLL 106
+ ISGT D I++ V + +L
Sbjct: 148 VTISGTPDAIIQCVKQICVVML 169
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 267 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 323
Query: 98 VDLV 101
L+
Sbjct: 324 QYLI 327
>gi|224142865|ref|XP_002324756.1| predicted protein [Populus trichocarpa]
gi|222866190|gb|EEF03321.1| predicted protein [Populus trichocarpa]
Length = 312
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 18/163 (11%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G +IGKGG TI Q QSGA+IQ++R + P + RI+ + GT ++I +A L+ D L
Sbjct: 149 GVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPYRIVELMGTPEQIAKAEQLINDVL- 207
Query: 107 TELHAEDQADDVGTKTK----------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
AE A GT ++ + +PN+ G +IGK G +IK+ S A I+
Sbjct: 208 ----AEADAGGSGTISRRYAGQGGSEHFSMKIPNNKVGLVIGKGGDSIKNMQARSGARIQ 263
Query: 157 ISRLDHSYYG--LNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
+ L H G +R V + GT ++ A +L+ SE+ L
Sbjct: 264 VIPL-HLPPGDTSTERTVHIEGTSEQVEAAKQLVNEVTSEELL 305
>gi|356573119|ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Glycine max]
Length = 446
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
+ R LV G +IG+ G I ++ AR+++ + PGT R +MIS
Sbjct: 47 SVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKIL---DGPPGTVQRAVMISAKEEPG 103
Query: 90 -----TIDEILRAVDLVIDKLLTEL-HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGAT 143
+D +LR +ID L ++ HA V K +L+VP S GS+IGK G T
Sbjct: 104 SSVPPAVDGLLRVHKRIIDGLESDFTHA---PSGVAGKVSTKLLVPASQAGSLIGKQGGT 160
Query: 144 IKSFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRALELILLKLSE 194
+KS + S ++++ D + L +DR+V + G +ALELI L +
Sbjct: 161 VKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHLRK 213
>gi|146416151|ref|XP_001484045.1| hypothetical protein PGUG_03426 [Meyerozyma guilliermondii ATCC
6260]
Length = 342
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 28/186 (15%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG+ G I+ + ++ + +SR PG+ +RI+ +SGT+D+ RA
Sbjct: 63 RVLVSAKEAGCLIGQNGQVIDSIRQETNTKAGISR---LQPGSHERILTVSGTLDDAARA 119
Query: 98 VDLVIDKL---------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
+ L L +L + G T LRL++PN+ G++IG G
Sbjct: 120 LSYFAQALCNANTETFSTYSYFPLKQLSLTPCVE--GETTILRLLIPNAQMGTLIGSKGV 177
Query: 143 TIKSFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
I+ QA IS + + G N+RLV L GT+++ L +I L ED +S
Sbjct: 178 RIQQI----QANFHISMIASKSFLPGSNERLVELQGTVNDLYDTLRVISRCLIED--FSS 231
Query: 201 TMTVPY 206
+T Y
Sbjct: 232 IVTTSY 237
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 27/195 (13%)
Query: 22 PVKSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P+K LS P + T +R L+ N G +IG G I Q Q+ I + S F PG
Sbjct: 142 PLKQLSLTPCVEGETTILRLLIPNAQMGTLIGSKGVRIQ--QIQANFHISMIASKSFLPG 199
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV-----GTKTKLR--------- 125
+ +R++ + GT++++ + VI + L E + G TK R
Sbjct: 200 SNERLVELQGTVNDLYDTLR-VISRCLIEDFSSIVTTSYYIPRGGNTTKYRGTDRRSSLP 258
Query: 126 -----LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
L PN G++IGK G+ I+ S A I IS G +R T++G+
Sbjct: 259 GISTTLYFPNEIVGALIGKNGSRIQGVRKVSGASIGIS---EEVDGKTEREFTISGSSHA 315
Query: 181 QMRALELILLKLSED 195
+A +L+ L +
Sbjct: 316 VEKAKDLLYHNLERE 330
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 103 DKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
+K+ T L + + + R++V G +IG+ G I S ++ ISRL
Sbjct: 41 EKVSTSLPSVEDMSNASALINYRVLVSAKEAGCLIGQNGQVIDSIRQETNTKAGISRLQP 100
Query: 163 SYYGLNDRLVTLTGTLDEQMRAL 185
G ++R++T++GTLD+ RAL
Sbjct: 101 ---GSHERILTVSGTLDDAARAL 120
>gi|398365639|ref|NP_009792.3| Pbp2p [Saccharomyces cerevisiae S288c]
gi|586350|sp|P38151.1|PBP2_YEAST RecName: Full=PAB1-binding protein 2
gi|536633|emb|CAA85196.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151946618|gb|EDN64840.1| pbp1p binding protein [Saccharomyces cerevisiae YJM789]
gi|190408618|gb|EDV11883.1| PAB1-binding protein 2 [Saccharomyces cerevisiae RM11-1a]
gi|207347516|gb|EDZ73659.1| YBR233Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272922|gb|EEU07890.1| Pbp2p [Saccharomyces cerevisiae JAY291]
gi|285810563|tpg|DAA07348.1| TPA: Pbp2p [Saccharomyces cerevisiae S288c]
gi|323310022|gb|EGA63217.1| Pbp2p [Saccharomyces cerevisiae FostersO]
gi|323334658|gb|EGA76032.1| Pbp2p [Saccharomyces cerevisiae AWRI796]
gi|323338741|gb|EGA79957.1| Pbp2p [Saccharomyces cerevisiae Vin13]
gi|323349811|gb|EGA84026.1| Pbp2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356159|gb|EGA87964.1| Pbp2p [Saccharomyces cerevisiae VL3]
gi|392301080|gb|EIW12169.1| Pbp2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 413
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D ++R L A ++G G+TI+ +S++ ARI +S + G +RI+
Sbjct: 59 SPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNN---IRGVPERIVY 115
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ GT D++ +A +++ LL E ED +D+ + + L++P+ G IIGK G+ ++
Sbjct: 116 VRGTCDDVAKAYGMIVRALLEEHGNEDNGEDI--EISINLLIPHHLMGCIIGKRGSRLRE 173
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
D S A K+ + NDR++T+ G D
Sbjct: 174 IEDLSAA--KLFASPNQLLLSNDRILTINGVPD 204
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D D+V + LR++ I+G GATI ++ A I IS ++ G+ +R+V
Sbjct: 58 DSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINIS---NNIRGVPERIV 114
Query: 173 TLTGTLDEQMRALELILLKLSED 195
+ GT D+ +A +I+ L E+
Sbjct: 115 YVRGTCDDVAKAYGMIVRALLEE 137
>gi|349576607|dbj|GAA21778.1| K7_Pbp2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 413
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D ++R L A ++G G+TI+ +S++ ARI +S + G +RI+
Sbjct: 59 SPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNN---IRGVPERIVY 115
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ GT D++ +A +++ LL E ED +D+ + + L++P+ G IIGK G+ ++
Sbjct: 116 VRGTCDDVAKAYGMIVRALLEEHGNEDNGEDI--EISINLLIPHHLMGCIIGKRGSRLRE 173
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
D S A K+ + NDR++T+ G D
Sbjct: 174 IEDLSAA--KLFASPNQLLLSNDRILTINGVPD 204
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D D+V + LR++ I+G GATI ++ A I IS ++ G+ +R+V
Sbjct: 58 DSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINIS---NNIRGVPERIV 114
Query: 173 TLTGTLDEQMRALELILLKLSED 195
+ GT D+ +A +I+ L E+
Sbjct: 115 YVRGTCDDVAKAYGMIVRALLEE 137
>gi|392597310|gb|EIW86632.1| cytoplasmic protein [Coniophora puteana RWD-64-598 SS2]
Length = 328
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 16/193 (8%)
Query: 6 SSYVP-SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQS 64
SS P +PD G RS +P P +R LVS AG +IGK G + D + Q+
Sbjct: 2 SSKSPVNPDSAGSRSPSPA------PGNDTLTLRALVSTKEAGVIIGKAGKNVADLRDQT 55
Query: 65 GARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKL 124
G + +S+ PG +R++ + G+++ + +A L+I +L+ T +
Sbjct: 56 GVKAGVSK---VIPGVHERVLTVGGSVEAVAKAYTLIIAQLVESNPTSVSMSSPSPHTSI 112
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDS--QAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
RL++ ++ G+IIG+ G IK+ D + + V L S +R+V + G +
Sbjct: 113 RLLISHNLMGTIIGRNGLKIKAIQDVTGVRMVAAKDMLPQS----TERIVEVQGAPESIG 168
Query: 183 RALELILLKLSED 195
RA+E I L ED
Sbjct: 169 RAIEEIGKCLLED 181
>gi|290878251|emb|CBK39310.1| Pbp2p [Saccharomyces cerevisiae EC1118]
Length = 413
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D ++R L A ++G G+TI+ +S++ ARI +S + G +RI+
Sbjct: 59 SPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNN---IRGVPERIVY 115
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ GT D++ +A +++ LL E ED +D+ + + L++P+ G IIGK G+ ++
Sbjct: 116 VRGTCDDVAKAYGMIVRALLEEHGNEDNGEDI--EISINLLIPHHLMGCIIGKRGSRLRE 173
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
D S A K+ + NDR++T+ G D
Sbjct: 174 IEDLSAA--KLFASPNQLLLSNDRILTINGVPD 204
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D D+V + LR++ I+G GATI ++ A I IS ++ G+ +R+V
Sbjct: 58 DSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINIS---NNIRGVPERIV 114
Query: 173 TLTGTLDEQMRALELILLKLSED 195
+ GT D+ +A +I+ L E+
Sbjct: 115 YVRGTCDDVAKAYGMIVRALLEE 137
>gi|388855866|emb|CCF50441.1| related to poly(rC)-binding protein 3 [Ustilago hordei]
Length = 440
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGKGG+ + + + Q+G + +S+ PG DR++ ++GT+ I
Sbjct: 45 VRALVSTKEAGIIIGKGGANVAELREQTGVKAGVSK---VVPGVHDRVLSVTGTLVGISD 101
Query: 97 AVDLVIDKLLTE-LHAEDQADD-----VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
A L+ +L L+A QAD + +RL++ ++ G++IG+ G IK D
Sbjct: 102 AFALIAKTILENPLNAPVQADGTPAQAAAQTSSVRLLISHNLMGTVIGRQGLKIKHIQDL 161
Query: 151 SQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
S A + S+ L S +R+V + G++D A+ I L+ED SQ + +
Sbjct: 162 SGARMVASKEMLPQS----TERVVEVQGSVDAIRVAVHQIARCLAEDCDRSQNVVL 213
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSR-SHEFFPGTTDRIIMISGTIDEILRAVDLVID 103
+ G +IGKGGS I + + SG+RI +++ H+ T +R+ I GT + +A+ L+ +
Sbjct: 354 MVGCIIGKGGSKITEIRRLSGSRISIAKVPHDE---TGERMFTIQGTPEANEKALFLLYN 410
Query: 104 KLLTE 108
+L TE
Sbjct: 411 QLETE 415
>gi|189234912|ref|XP_969611.2| PREDICTED: similar to AGAP004942-PA [Tribolium castaneum]
Length = 446
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 12/157 (7%)
Query: 24 KSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR 83
K++ +D + IR ++ G++IGK G + F+ +SGA+I +S +R
Sbjct: 6 KNMINDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPER 60
Query: 84 IIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT---KLRLIVPNSSCGSIIGKA 140
I+ ++G+ + I +A L+ K E + + G LRLIVP S CGS+IGK
Sbjct: 61 IVTVTGSTNAIFKAFTLICKKF--EEFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKG 118
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
G+ IK + + A I+++ +R VT++GT
Sbjct: 119 GSKIKEIREVTGASIQVA--SEMLPNSTERAVTISGT 153
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R +V G++IGKGGS I + + +GA IQ+ + E P +T+R + ISGT +
Sbjct: 99 PITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV--ASEMLPNSTERAVTISGTGEA 156
Query: 94 ILRAV 98
I + +
Sbjct: 157 ITQCI 161
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA- 97
V N L G +IGKGG+ I + + SGA I++S + G TDR I ISG D + A
Sbjct: 270 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALAQ 329
Query: 98 --VDLVIDKLLTELHAED 113
+++ ++ L A++
Sbjct: 330 YLINMSVELQKANLEAQN 347
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ VPN G IIGK G I S A+I+IS D G+ DR +T++G D A
Sbjct: 270 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALAQ 329
Query: 186 ELILL--KLSEDTLYSQ 200
LI + +L + L +Q
Sbjct: 330 YLINMSVELQKANLEAQ 346
>gi|365766932|gb|EHN08421.1| Pbp2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 413
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D ++R L A ++G G+TI+ +S++ ARI +S + G +RI+
Sbjct: 59 SPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNN---IRGVPERIVY 115
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ GT D++ +A +++ LL E ED +D+ + + L++P+ G IIGK G+ ++
Sbjct: 116 VRGTCDDVAKAYGMIVRALLEEHGNEDNGEDI--EISINLLIPHHLMGCIIGKRGSRLRE 173
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
D S A K+ + NDR++T+ G D
Sbjct: 174 IEDLSAA--KLFASPNQLLLSNDRILTINGVPD 204
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D D+V + LR++ I+G GATI ++ A I IS ++ G+ +R+V
Sbjct: 58 DSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINIS---NNIRGVPERIV 114
Query: 173 TLTGTLDEQMRALELILLKLSED 195
+ GT D+ +A +I+ L E+
Sbjct: 115 YVRGTCDDVAKAYGMIVRALLEE 137
>gi|356514579|ref|XP_003525983.1| PREDICTED: uncharacterized protein LOC100797476 [Glycine max]
Length = 554
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N G +IGKGG TI Q QSGA+IQ++R + P ++ R + + GT + I A
Sbjct: 87 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQITRDIDADPNSSTRTVELMGTPEAISSA 146
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTK----------LRLIVPNSSCGSIIGKAGATIKSF 147
+KL+ E+ AE ++ G T+ + +PN+ G IIGK G TIK+
Sbjct: 147 -----EKLINEVLAEAESGGSGIVTRRFTGQAGSDEFVMKIPNNKVGLIIGKGGETIKNM 201
Query: 148 MDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLS-EDTLYSQT 201
+ A I++ L D S +R + + GT ++ A +L+ +S E+ + +
Sbjct: 202 QASTGARIQVIPLHLPPGDTS----TERTLKIDGTPEQIESAKQLVYQVISGENRVRNPA 257
Query: 202 MTVPYTYAGVFFSGFHGMPYGAVPPPVP 229
M+ G G+ P PP P
Sbjct: 258 MS-----GGYPQQGYQSRPPSNWAPPAP 280
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG--------- 89
LV G++IG+ G I ++ ARI++ + PGTT+R +M+S
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTTERAVMVSAKEEPDSSLP 57
Query: 90 -TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
+D +LR +ID L ++ + + G K RL+VP S GS+IGK G T+KS
Sbjct: 58 PAMDGLLRVHKRIIDGLDSD--SSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQ 115
Query: 149 DDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRALELILLKL 192
+ S ++++ D + L +DR+V + G +A+ELI L
Sbjct: 116 EASTCIVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHL 161
>gi|149236405|ref|XP_001524080.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452456|gb|EDK46712.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 399
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG+ G I+ ++++ + +SR PGT +RI+ +SG +D+ +A
Sbjct: 127 RVLVSAKEAGCLIGQNGGVIDSIRNETNTKAGISR---LTPGTHERILTVSGKLDDSAKA 183
Query: 98 VDLVIDKL------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ L L +L + + G T +RL++PNS G++IG GA I+
Sbjct: 184 LSYFAQALCDSAIELYNYFPLKQLSSTPCVE--GETTIIRLLIPNSQMGTLIGSKGARIQ 241
Query: 146 SFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
Q +S + + G N+RLV L GT+D+ +L +I L ED S T
Sbjct: 242 QI----QQSFGVSMIASKLFLPGSNERLVELQGTVDDLYDSLRVISRCLIEDFSSSVGTT 297
Query: 204 VPY 206
Y
Sbjct: 298 TYY 300
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 25/189 (13%)
Query: 22 PVKSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P+K LSS P + T IR L+ N G +IG G+ I Q G + + S F PG
Sbjct: 203 PLKQLSSTPCVEGETTIIRLLIPNSQMGTLIGSKGARIQQIQQSFG--VSMIASKLFLPG 260
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-------------KTKLRL 126
+ +R++ + GT+D++ ++ ++ L+ ED + VGT K+ +
Sbjct: 261 SNERLVELQGTVDDLYDSLRVISRCLI-----EDFSSSVGTTTYYVPRSHQMTRKSTATI 315
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALE 186
PN G++IGK G+ I+ S A+I IS + G ++R+ T+TGT +A
Sbjct: 316 NFPNDMVGALIGKNGSRIQGVRKVSGAMIGISEAED---GSDERVFTITGTQQAVEKAKG 372
Query: 187 LILLKLSED 195
L+ L +
Sbjct: 373 LLYHNLERE 381
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 43 NPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVI 102
N + GA+IGK GS I + SGA I +S + + G+ +R+ I+GT + +A L+
Sbjct: 319 NDMVGALIGKNGSRIQGVRKVSGAMIGISEAED---GSDERVFTITGTQQAVEKAKGLLY 375
Query: 103 DKLLTELHAEDQADDVG 119
L E +A G
Sbjct: 376 HNLEREEQRRAEATSAG 392
>gi|322796009|gb|EFZ18633.1| hypothetical protein SINV_09712 [Solenopsis invicta]
Length = 440
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 19/190 (10%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG-----SCPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVGTKT------KLRLIVPNSSCGSI 136
++G + I +A L+ K ++ H G LRLIVP S CGS+
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSL 123
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
IGK G+ IK + + A I+++ +R VT++GT + + + I + E
Sbjct: 124 IGKGGSKIKEIREVTGASIQVA--SEMLPNSTERAVTISGTSEAITQCIYHICCVMLESP 181
Query: 197 LYSQTMTVPY 206
+ T+PY
Sbjct: 182 --PKGATIPY 189
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
V N L G +IGKGG+ I + + SGA I++S E G TDR I I+G D + A
Sbjct: 374 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 433
Query: 98 VDLV 101
L+
Sbjct: 434 QYLI 437
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 374 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 433
Query: 185 LELILLK 191
LI ++
Sbjct: 434 QYLINMR 440
>gi|452978145|gb|EME77909.1| hypothetical protein MYCFIDRAFT_63821 [Pseudocercospora fijiensis
CIRAD86]
Length = 480
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+ A VIGKGG + + +GA+ +S E+ G +RI+ +SG +D +
Sbjct: 118 HVRAIISSAEAATVIGKGGENVTQIRRLAGAKCTVS---EYTRGAVERILTVSGHVDAVA 174
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E +QA +KT LRL++P+ GSIIGK G I+ + S A
Sbjct: 175 KAFGLIIRTLNQE--PLEQASTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGAR 232
Query: 155 IKIS 158
+ S
Sbjct: 233 LNAS 236
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G ++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT
Sbjct: 397 GQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNN---NERLVTITGTQ 453
Query: 179 DEQMRALELILLKLSEDTLYSQTM 202
+ AL ++ +L E + S ++
Sbjct: 454 ECNQMALYMLYSRLGESSKNSNSI 477
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
+S P K +R L+ + L G++IGK G I + Q SGAR+ S S P +T+R ++
Sbjct: 192 ASTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASES--CLPLSTERSLV 249
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
+ G D + A V L+ +L
Sbjct: 250 VLGVADAVHIATYYVGSTLVEQL 272
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + +R++ I+GT +
Sbjct: 398 QPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NNNERLVTITGTQE 454
Query: 93 EILRAVDLVIDKL 105
A+ ++ +L
Sbjct: 455 CNQMALYMLYSRL 467
>gi|452837822|gb|EME39763.1| hypothetical protein DOTSEDRAFT_74610 [Dothistroma septosporum
NZE10]
Length = 490
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+ A VIGKGG + + +GA+ +S E+ G +RI+ +SG +D +
Sbjct: 127 HVRAIISSAEAATVIGKGGENVTQIRRMAGAKCTVS---EYTRGAVERILTVSGLVDAVA 183
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E DQ +KT LRL++P+ GSIIGK G I+ + S A
Sbjct: 184 KAFGLIIRTLNQE--PLDQPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGAR 241
Query: 155 IKIS 158
+ S
Sbjct: 242 LNAS 245
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G ++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT
Sbjct: 407 GQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNN---NERLVTITGTQ 463
Query: 179 DEQMRALELILLKLSEDTLYSQT 201
+ AL ++ +L E + S +
Sbjct: 464 ECNQMALYMLYSRLGESSKNSNS 486
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+ +P ++P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 190 IRTLNQEPLDQPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASES-- 247
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R +++ G D + A V L+ +L
Sbjct: 248 CLPLSTERSLVVLGVADAVHIATYYVGSTLVEQL 281
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
+P H P++ + +P + + N + GA+IGKGG+ IN+ + SG+ I++
Sbjct: 389 APQAHAGPPQQPMQGMVPG---QPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI 445
Query: 71 SRSHEFFPGTTDRIIMISGT 90
+ + +R++ I+GT
Sbjct: 446 NEPQD---NNNERLVTITGT 462
>gi|357465709|ref|XP_003603139.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492187|gb|AES73390.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 14/161 (8%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N G +IGKGG TI Q QSGA+IQ++R + P + R++ + GT D + A
Sbjct: 89 KIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGTPDAVSSA 148
Query: 98 VDLVIDKLLTELHAEDQADDVGTKT--------KLRLIVPNSSCGSIIGKAGATIKSFMD 149
L I+++L E AE A GT+ + + +PN+ G IIGK G TIK
Sbjct: 149 EKL-INEVLAE--AEAGASVGGTRRMVAQSGGDEFVMQIPNNKVGLIIGKGGETIKGMQA 205
Query: 150 DSQAVIKISRLDHSYYG--LNDRLVTLTGTLDEQMRALELI 188
+ A I++ L H G +R + + GT D+ A +L+
Sbjct: 206 STGARIQVIPL-HPPPGDTSTERTLKIDGTPDQIESAKQLV 245
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
Q G+ K+ +PN G +IGK G TIK S A I+++R + R+V
Sbjct: 80 QGGSYGSSKKIE--IPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVE 137
Query: 174 LTGTLDEQMRALELILLKLSE 194
L GT D A +LI L+E
Sbjct: 138 LMGTPDAVSSAEKLINEVLAE 158
>gi|255725734|ref|XP_002547796.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135687|gb|EER35241.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 379
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 26/183 (14%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG G I+ + ++ + +SR PG+ +RI+ +SG +D+ +A
Sbjct: 102 RVLVSAKEAGCLIGTNGQVIDSIRGETNTKAGISR---LVPGSHERILTVSGKLDDCAKA 158
Query: 98 VDLVIDKL------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ L L +L + ++ T LRL++PN+ G++IG GA I+
Sbjct: 159 LSYFAQALVNANIESYNYFPLKQLSSTPNTEET---TILRLLIPNTQMGTLIGSKGARIQ 215
Query: 146 SFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
Q+ IS + + G N+RLV L G++D+ +L +I L ED +S +
Sbjct: 216 QI----QSKYNISMIASKSFLPGSNERLVELQGSVDDLYDSLRVISRCLMED--FSSIVG 269
Query: 204 VPY 206
V Y
Sbjct: 270 VSY 272
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 45/200 (22%)
Query: 22 PVKSLSSDP-TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
P+K LSS P TE+ T +R L+ N G +IG G+ I QS+ I + S F PG+
Sbjct: 178 PLKQLSSTPNTEETTILRLLIPNTQMGTLIGSKGARIQQIQSK--YNISMIASKSFLPGS 235
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK------------------- 121
+R++ + G++D++ ++ ++ L+ ED + VG
Sbjct: 236 NERLVELQGSVDDLYDSLRVISRCLM-----EDFSSIVGVSYYVPRGSNSSNNNSNSSSS 290
Query: 122 -------------TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
K L PN G++IGK GA I + A I IS G +
Sbjct: 291 TGGLSSGSGGTNTKKATLTFPNDIVGALIGKQGARINGVRKITGATISISD-----GGED 345
Query: 169 DRLVTLTGTLDEQMRALELI 188
+R+ T+TG+ +A ++I
Sbjct: 346 ERIFTITGSSQAVEKAKQMI 365
>gi|449495710|ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cucumis sativus]
Length = 516
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 30/188 (15%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + N G +IGKGG TI Q QSGA+IQ++R E P + R + + GT +++
Sbjct: 86 TSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQV 145
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGTKT--------------KLRLIVPNSSCGSIIGKA 140
RA ++L+ E+ AE AD G+ + + + +PN+ +IGK
Sbjct: 146 SRA-----EQLINEVIAE--ADSGGSASTTNQAINSSQPGVEQFVMKIPNNKVALVIGKG 198
Query: 141 GATIKSFMDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
G TIKS S A ++I L D S +R V + G ++ A ELI +S
Sbjct: 199 GETIKSIQSKSAARVQIIPLHLPPGDTS----TERSVYINGLKEQIESAKELINEVISGK 254
Query: 196 TLYSQTMT 203
L S+T +
Sbjct: 255 RLVSETTS 262
>gi|67523265|ref|XP_659693.1| hypothetical protein AN2089.2 [Aspergillus nidulans FGSC A4]
gi|40745765|gb|EAA64921.1| hypothetical protein AN2089.2 [Aspergillus nidulans FGSC A4]
Length = 745
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+ A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG D +
Sbjct: 109 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAVA 165
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E D A +KT LRL++P+ GSIIGK G I+ D S A
Sbjct: 166 KAFGLIIRTLNNE--PLDAASTAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQDASGAR 223
Query: 155 IKIS 158
+ S
Sbjct: 224 LNAS 227
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDP------TEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P + TY +R L+ + L G++IGKGG+ I + Q SGAR L+ S
Sbjct: 172 IRTLNNEPLDAASTAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQDASGAR--LNASDA 229
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 230 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQL 263
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT + A
Sbjct: 394 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENS---NERLVTITGTQECNQMA 450
Query: 185 LELILLKL 192
L ++ +L
Sbjct: 451 LYMLYSRL 458
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ E + +R++ I+GT +
Sbjct: 389 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE---NSNERLVTITGTQE 445
Query: 93 EILRAVDLVIDKLLT--ELHAEDQAD 116
A+ ++ +L T H+ Q D
Sbjct: 446 CNQMALYMLYSRLDTYRAAHSSGQFD 471
>gi|259487459|tpe|CBF86155.1| TPA: KH domain RNA binding protein (AFU_orthologue; AFUA_2G04940)
[Aspergillus nidulans FGSC A4]
Length = 465
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+ A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG D +
Sbjct: 109 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAVA 165
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E D A +KT LRL++P+ GSIIGK G I+ D S A
Sbjct: 166 KAFGLIIRTLNNE--PLDAASTAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQDASGAR 223
Query: 155 IKIS 158
+ S
Sbjct: 224 LNAS 227
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT + A
Sbjct: 394 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENS---NERLVTITGTQECNQMA 450
Query: 185 LELILLKLSED 195
L ++ +L +
Sbjct: 451 LYMLYSRLESE 461
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDP------TEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P + TY +R L+ + L G++IGKGG+ I + Q SGAR L+ S
Sbjct: 172 IRTLNNEPLDAASTAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQDASGAR--LNASDA 229
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 230 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQL 263
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ E + +R++ I+GT +
Sbjct: 389 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE---NSNERLVTITGTQE 445
Query: 93 EILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 446 CNQMALYMLYSRLESEKH 463
>gi|449438689|ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221280 [Cucumis sativus]
Length = 516
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 30/188 (15%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + + N G +IGKGG TI Q QSGA+IQ++R E P + R + + GT +++
Sbjct: 86 TSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQV 145
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGTKT--------------KLRLIVPNSSCGSIIGKA 140
RA ++L+ E+ AE AD G+ + + + +PN+ +IGK
Sbjct: 146 SRA-----EQLINEVIAE--ADSGGSASTTNQAINSSQPGVEQFVMKIPNNKVALVIGKG 198
Query: 141 GATIKSFMDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
G TIKS S A ++I L D S +R V + G ++ A ELI +S
Sbjct: 199 GETIKSIQSKSAARVQIIPLHLPPGDTS----TERSVYINGLKEQIESAKELINEVISGK 254
Query: 196 TLYSQTMT 203
L S+T +
Sbjct: 255 RLVSETTS 262
>gi|332019831|gb|EGI60292.1| Poly(rC)-binding protein 3 [Acromyrmex echinatior]
Length = 566
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 10 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG-----SCPERIV 63
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVGTKT------KLRLIVPNSSCGSI 136
++G + I +A L+ K ++ H + G LRLIVP S CGS+
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEEWCSQFHDVPGSGAGGGGGVSRPPITLRLIVPASQCGSL 123
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
IGK G+ IK + + A I+++ +R VT++GT + + + I + E
Sbjct: 124 IGKGGSKIKEIREVTGASIQVA--SEMLPNSTERAVTISGTSEAITQCIYHICCVMLESP 181
Query: 197 LYSQTMTVPY 206
+ T+PY
Sbjct: 182 --PKGATIPY 189
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
V N L G +IGKGG+ I + + SGA I++S E G TDR I I+G D + A
Sbjct: 374 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 433
Query: 98 VDLV 101
L+
Sbjct: 434 QYLI 437
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 374 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 433
Query: 185 LELILLKL 192
LI + +
Sbjct: 434 QYLINMSV 441
>gi|397604059|gb|EJK58596.1| hypothetical protein THAOC_21266, partial [Thalassiosira oceanica]
Length = 523
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 20/192 (10%)
Query: 47 GAVIGKGGSTINDFQSQSGA-RIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
G VIGKGG I D Q++SG RI + ++ P RII GT RA KL
Sbjct: 104 GRVIGKGGEMIRDLQARSGCLRIDVDQN---VPHNAPRIISYRGT-----RAKIEFAKKL 155
Query: 106 LTELHAEDQADD---VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
+ L ED + +G + R+ VP ++ G +IG+ G I+ DS A I++ DH
Sbjct: 156 VQRLCREDGNEAELPLGDASIKRVRVPANTIGKVIGRKGDMIRRLQHDSMAKIQV---DH 212
Query: 163 SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYG 222
S ++R + +TG D +A E+IL L+ + L ++ V G P+G
Sbjct: 213 SNNQGHERTIVVTGMKDAVTKAEEMILF-LTSNPLCDAAQSLAML---VGHKANSGKPWG 268
Query: 223 AVPPPVPAVPHN 234
+ PP +P+N
Sbjct: 269 SG-PPYEGLPNN 279
>gi|71019141|ref|XP_759801.1| hypothetical protein UM03654.1 [Ustilago maydis 521]
gi|46099599|gb|EAK84832.1| hypothetical protein UM03654.1 [Ustilago maydis 521]
Length = 442
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGKGG+ + + + Q+G + +S+ PG DR++ ++GT+ I
Sbjct: 54 LRALVSTKEAGIIIGKGGANVAELREQTGVKAGVSK---VVPGVHDRVLSVTGTLVGISD 110
Query: 97 AVDLVIDKLLTE-LHAEDQADD-----VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
A L+ +L L+A QAD T +RL++ ++ G++IG+ G IK D
Sbjct: 111 AFALIAKTILENPLNAPVQADGSPAEAAAQTTSVRLLISHNLMGTVIGRQGLKIKHIQDL 170
Query: 151 SQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTV 204
S A + S+ L S +R+V + G++D A+ I L+ED +Q + +
Sbjct: 171 SGARMVASKEMLPQST----ERVVEVQGSVDAIRVAIHEIAKCLAEDWDRAQNVVL 222
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 21 APVKSLSS--DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
APV++ S + + T +R L+S+ L G VIG+ G I Q SGAR+ S+ E P
Sbjct: 126 APVQADGSPAEAAAQTTSVRLLISHNLMGTVIGRQGLKIKHIQDLSGARMVASK--EMLP 183
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+T+R++ + G++D I A+ I K L E
Sbjct: 184 QSTERVVEVQGSVDAIRVAIH-EIAKCLAE 212
>gi|198429828|ref|XP_002122756.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 53
[Ciona intestinalis]
Length = 525
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
G +IGKGGS I + + +SGARI++ + TD ++ISG+ D A +++ D +
Sbjct: 73 CGKIIGKGGSVIRELEQKSGARIKVCQRDR---SETDVPVVISGSQDARNAAHEMINDLM 129
Query: 106 LTELHAED-QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSY 164
L+ + D G+ +++ + + CG +IG+ G+TI D S IK+ + D
Sbjct: 130 NLNLNRRQPRERDTGSNEMIKIAIRKNDCGKLIGRGGSTINDIRDKSNTNIKVCQDDEYN 189
Query: 165 YGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGF 216
Y + V +TGT ++ A +LI L + Y + + G+ GF
Sbjct: 190 YEV---PVEITGTSEDCKLAKKLIQDLLEDRENYKPQNSYNDSGPGMTTDGF 238
>gi|356505941|ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 16 GKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
G+ + K P E + R LV G +IG+ G I ++ AR+++ +
Sbjct: 27 GEEAVVAEKKWPGWPGE--SVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKIL---D 81
Query: 76 FFPGTTDRIIMISG----------TIDEILRAVDLVIDKLLTEL-HAEDQADDVGTKTKL 124
PGT R +MIS +D +LR +ID L ++ HA V K
Sbjct: 82 GPPGTVQRAVMISAKEEPGSSVPPAVDGLLRIHKRIIDGLESDFTHA---PSGVAGKVST 138
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQM 182
+L+VP S GS+IGK G T+KS + S ++++ D + L +DR+V + G
Sbjct: 139 KLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVH 198
Query: 183 RALELILLKL 192
+ALELI L
Sbjct: 199 KALELIASHL 208
>gi|444513545|gb|ELV10391.1| Poly(rC)-binding protein 4 [Tupaia chinensis]
Length = 399
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGSNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLD 179
++++ L +S +R VT++G D
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPD 157
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 35/180 (19%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S+ + P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +
Sbjct: 95 SNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTV 152
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQADDV--GTKTKLR-------------------- 125
SG D I+ V + +L + Q V TKL+
Sbjct: 153 SGVPDAIILCVRQICAVILEGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDP 212
Query: 126 --------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+VPN G +IG+ G+ I S A IKI + G +R VT+TG+
Sbjct: 213 STQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI---GNQAEGAGERHVTITGS 269
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR+++ GSIIGK G T+K + S A I IS +R+ T+TG+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 184 ALELILLKLSED 195
A+ +I KL ED
Sbjct: 75 AVSMIAFKLDED 86
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 211 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 267
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 268 GSPVSIALAQYLITACLET 286
>gi|147818880|emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 22/204 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR---IIMISGT--I 91
IR L G VIG+GGS+I + SGA +++ + DR +I ++ T +
Sbjct: 309 IRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTK------ADRDECLITVTSTESV 362
Query: 92 DEILR-AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
D++ AV+ V LL + D+ DD +RL+VP+ G IIGK+G+ I
Sbjct: 363 DDLKSMAVEAV---LLLQAKINDEDDDT---VAIRLLVPSKIIGCIIGKSGSIINEIRKR 416
Query: 151 SQAVIKISRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
++A ++IS+ + ND L+ + G + AL I+L+L +D L + T T A
Sbjct: 417 TRADVRISKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRD-TGHNTSA 475
Query: 210 GV--FFSGFHGMPYGAVPPPVPAV 231
G +SG G+ +V P P V
Sbjct: 476 GTDSLYSGGAGLSVSSVLPSAPPV 499
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 49/239 (20%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI---------- 87
R L + + G+VIGK G IN + + A+I++ + FPG DR+I I
Sbjct: 40 RILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVV---DPFPGAKDRVITIYCYVKEKEEV 96
Query: 88 ------------SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGS 135
D +L+ +++ + + E+ K + +++VP+S +
Sbjct: 97 EVDDEFNDKQPLCPAQDALLKVHAAIVNAVAS---LENSDKKKKDKEECQILVPSSQSAN 153
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTG---TLDEQMRALEL 187
+IGKAGATIK ++A IKI+ D HS D V + G + + + A+
Sbjct: 154 VIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAISA 213
Query: 188 ILLKLS--EDTLYSQTM-----------TVPYTYAGVFFSGFHGMPYGAVPPPVPAVPH 233
I+ K + E+ T+ VP AG F+ + PPV A H
Sbjct: 214 IMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPAGGFYPSADSIVSARSVPPVLAATH 272
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE-FFPGTTDRIIM 86
+D + IR LV + + G +IGK GS IN+ + ++ A +++S+S D +I
Sbjct: 381 NDEDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRISKSERPKCADANDELIE 440
Query: 87 ISGTIDEILRAVDLVIDKL 105
+ G + + A+ ++ +L
Sbjct: 441 VVGEVGSVRDALVQIVLRL 459
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
T + +++P ++ G ++GK GA I + S AVI+IS S DR+ ++GT +
Sbjct: 565 TPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEIS---DSKSSRGDRVALISGTPE 621
Query: 180 EQMRALELI 188
++ A LI
Sbjct: 622 QKRTAENLI 630
>gi|359495228|ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera]
Length = 772
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ V N G +IGK G TI Q SGA+IQ++R + P + R + + G+++ I +A
Sbjct: 179 KMEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSASRPVELIGSLENINKA 238
Query: 98 VDLVIDKLLTELHAEDQ----------ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
L+ D ++ E A A VG ++++ VPN G IIGK G TIKS
Sbjct: 239 EKLIKD-VIAEADAGGSPSLVARGFATAQAVGAAEQVQIQVPNEKVGLIIGKGGETIKSL 297
Query: 148 MDDSQAVIK-----ISRLDHSYYGLNDRLVTLTGTLDEQMRALELI 188
S A I+ + D S +R V +TG + A E+I
Sbjct: 298 QTRSGARIQLIPQHLPEGDQS----KERTVRVTGDKKQIEMAREMI 339
>gi|425778068|gb|EKV16213.1| hypothetical protein PDIP_37280 [Penicillium digitatum Pd1]
gi|425780605|gb|EKV18611.1| hypothetical protein PDIG_09250 [Penicillium digitatum PHI26]
Length = 496
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG D
Sbjct: 111 HIRAVISSPEAATVIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAAA 167
Query: 96 RAVDLVIDKLLTE-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A L+I L E L A A +KT LRL++P+ GSIIGK G+ I+ + S A
Sbjct: 168 KAFGLIIRTLNNEPLEAASTAQ---SKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGA 224
Query: 154 VIKIS 158
+ S
Sbjct: 225 RLNAS 229
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +PN G+IIGK GA I S +VIKI+ S N+RLVT+TGT + A
Sbjct: 399 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQESS---NERLVTITGTAECNQMA 455
Query: 185 LELILLKL 192
L ++ +L
Sbjct: 456 LYMLYSRL 463
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTE------KPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E TY +R L+ + L G++IGKGGS I + Q SGAR L+ S
Sbjct: 174 IRTLNNEPLEAASTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGAR--LNASDA 231
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 232 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQL 265
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 8 YVPSPDVHGKRSTAPVKSLSSDPTE-------KPTYIRFLVSNPLAGAVIGKGGSTINDF 60
+ P+P V G + P + + P +P + + N + GA+IGKGG+ IN+
Sbjct: 362 HQPAPFVGGPQQPTPGRGPPTAPAPVGASMPGQPLTQQIYIPNDMVGAIIGKGGAKINEI 421
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ SG+ I+++ E + +R++ I+GT + A+ ++ +L
Sbjct: 422 RHLSGSVIKINEPQE---SSNERLVTITGTAECNQMALYMLYSRL 463
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 95/216 (43%), Gaps = 30/216 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------- 89
R LV GA+IG+ G I ++ ARI++ + PG +R +MIS
Sbjct: 233 FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKIL---DGPPGVPERAVMISAKDEPDAP 289
Query: 90 ---TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+D +LR + D E ++ G RL+VP+S GS+IGK GATIKS
Sbjct: 290 LSPAMDGLLRVHKRITDSSDGESSQPQRS--AGNIGPTRLLVPSSQAGSLIGKQGATIKS 347
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
D S+++++I +DR+V + G A+ELI L + +P
Sbjct: 348 IQDSSKSIVRIVENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRK--FLVDRSVLPL 405
Query: 207 TYAGVFFSGFHGMPY-GAVPPPVPAVPHNTAAHYGP 241
A + HGMP VPPP H+GP
Sbjct: 406 FEAHM---KMHGMPREQPVPPP---------QHWGP 429
>gi|307199010|gb|EFN79734.1| Poly(rC)-binding protein 3 [Harpegnathos saltator]
Length = 469
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 19/190 (10%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 7 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIV 60
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVGTKT------KLRLIVPNSSCGSI 136
++G + I +A L+ K ++ H G LRLIVP S CGS+
Sbjct: 61 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSL 120
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
IGK G+ IK + + A I+++ +R VT++GT + + + I + E
Sbjct: 121 IGKGGSKIKEIREVTGASIQVA--SEMLPNSTERAVTISGTSEAITQCIYHICCVMLESP 178
Query: 197 LYSQTMTVPY 206
+ T+PY
Sbjct: 179 --PKGATIPY 186
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA- 97
V N L G +IGKGG+ I + + SGA I++S E G TDR I I+G D + A
Sbjct: 278 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQ 337
Query: 98 --VDLVIDKLLTELHAED 113
+++ ++ L A++
Sbjct: 338 YLINMSVELQKANLEAQN 355
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 278 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQ 337
Query: 186 ELILL--KLSEDTLYSQTMTVP 205
LI + +L + L +Q P
Sbjct: 338 YLINMSVELQKANLEAQNTQTP 359
>gi|226497902|ref|NP_001151605.1| nucleic acid binding protein [Zea mays]
gi|195648058|gb|ACG43497.1| nucleic acid binding protein [Zea mays]
Length = 524
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 97/223 (43%), Gaps = 44/223 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------- 89
R LV GA+IG+ G I ++ ARI++ + PG +R +MIS
Sbjct: 123 FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKIL---DGPPGVPERAVMISAKDEPDAP 179
Query: 90 ---TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+D +LR + D E ++ G RL+VP+S GS+IGK GATIKS
Sbjct: 180 LSPAMDGLLRVHKRITDSSDGESSQPQRS--AGNIGPTRLLVPSSQAGSLIGKQGATIKS 237
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI-------LLKLSEDTLYS 199
D S+++++I +DR+V + G +A+ELI L+ S L+
Sbjct: 238 IQDSSKSIVRIVENVPPVALNDDRVVEIQGEPLGVQKAVELISSHLRKFLVDRSVLPLFE 297
Query: 200 QTMTVPYTYAGVFFSGFHGMPY-GAVPPPVPAVPHNTAAHYGP 241
M + HGMP VPPP H+GP
Sbjct: 298 AHMKM------------HGMPREQPVPPP---------QHWGP 319
>gi|241956728|ref|XP_002421084.1| RNA-binding protein, putative [Candida dubliniensis CD36]
gi|223644427|emb|CAX41241.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 377
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 22/171 (12%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG G I+ ++++ + +SR PG+ +RI+ +SG +D+ +A
Sbjct: 84 RVLVSAKEAGCLIGTNGQVIDSIRNETSTKAGISR---LIPGSHERILTVSGKLDDCAKA 140
Query: 98 VDLVIDKL------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ L L +L + +D T LRL++PNS G++IG G I+
Sbjct: 141 LSYFAQALINGNIENYNYFPLKQLSSTPNTNDT---TILRLLIPNSQMGTLIGFKGIRIQ 197
Query: 146 SFMDDSQAVIKISRLDHSYY-GLNDRLVTLTGTLDEQMRALELILLKLSED 195
++ + S+ S+ G N+RLV L GT+D+ +L +I L ED
Sbjct: 198 QLQNNYNISMIASK---SFLPGSNERLVELQGTVDDLYDSLRIISRCLIED 245
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 51/208 (24%)
Query: 22 PVKSLSSDP-TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
P+K LSS P T T +R L+ N G +IG G I Q Q+ I + S F PG+
Sbjct: 160 PLKQLSSTPNTNDTTILRLLIPNSQMGTLIGFKGIRIQ--QLQNNYNISMIASKSFLPGS 217
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-------------------- 120
+R++ + GT+D++ ++ ++++ ED + VGT
Sbjct: 218 NERLVELQGTVDDLYDSL-----RIISRCLIEDFSSIVGTTYYVPRGNTYSHSHNHNHNH 272
Query: 121 --------------------KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL 160
KT + PN G++IGK G+ I S A+I IS +
Sbjct: 273 NNNSTGVGAGSGVGGGSGAGKTIDTISFPNDIVGALIGKRGSRIDGVRKVSGAMIAISEI 332
Query: 161 DHSYYGLNDRLVTLTGTLDEQMRALELI 188
G N+R+ T+TG+ +A ++I
Sbjct: 333 IE---GENERIFTITGSSHSVEKAKQMI 357
>gi|449442959|ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 483
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
+ R LV G++IG+ G I ++ ARI++ + PGT +R +M+S
Sbjct: 85 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTAERAVMVSAKDEPD 141
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+D +LR ++D L + A + G+K RL+V S GS+IGK G T+
Sbjct: 142 SAFPPAVDGLLRVHKRIVDGLEGD---NAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTV 198
Query: 145 KSFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRALELILLKL 192
KS ++S ++++ D + L +DR+V + G +A+ELI L
Sbjct: 199 KSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHL 248
>gi|345486914|ref|XP_001607400.2| PREDICTED: poly(rC)-binding protein 3-like [Nasonia vitripennis]
Length = 476
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 20/191 (10%)
Query: 26 LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
L+ DP+ T IR ++ G++IGK G + F+ +SGA+I +S +RI+
Sbjct: 12 LNDDPSVTLT-IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGS-----CPERIV 65
Query: 86 MISGTIDEILRAVDLVIDKL---LTELHAEDQADDVGTKTK-------LRLIVPNSSCGS 135
++G + I +A L+ K ++ H + G LRLIVP S CGS
Sbjct: 66 TVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGGGNAGGGGGVPRPPITLRLIVPASQCGS 125
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+IGK G+ IK + + A I+++ +R VT++GT + + + I + E
Sbjct: 126 LIGKGGSKIKEIREVTGASIQVA--SEMLPNSTERAVTISGTSEAITQCIYHICCVMLES 183
Query: 196 TLYSQTMTVPY 206
+ T+PY
Sbjct: 184 P--PKGATIPY 192
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA- 97
V N L G +IGKGG+ I + + SGA I++S E G TDR I I+G D + A
Sbjct: 284 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGPTDRTITITGNPDSVALAQ 343
Query: 98 --VDLVIDKLLTELHAED 113
+++ ++ L A++
Sbjct: 344 YLINMSVELQKANLEAQN 361
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ VPN G IIGK G I S A+I+IS + G DR +T+TG D A
Sbjct: 284 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGPTDRTITITGNPDSVALAQ 343
Query: 186 ELILL--KLSEDTLYSQTMTVP 205
LI + +L + L +Q P
Sbjct: 344 YLINMSVELQKANLEAQNTQNP 365
>gi|126336339|ref|XP_001367908.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Monodelphis
domestica]
Length = 410
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R ++ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTGAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L +K LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YG V P
Sbjct: 189 GTVLLSANQGFSVQGQYGTVTP 210
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 60/202 (29%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG
Sbjct: 98 SKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGV 155
Query: 91 IDEILRAVDLVIDKLL------------------TELHAEDQADDV----GTKT-----K 123
D I+ V + +L T L + +Q V GT T K
Sbjct: 156 PDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGTVTPAEVSK 215
Query: 124 LR----------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
L+ +VPN G +IG+ G+ I S A I
Sbjct: 216 LQQLSGHPVPFASPSVVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
Query: 156 KISRLDHSYYGLNDRLVTLTGT 177
KI + G +R VT+TG+
Sbjct: 276 KI---GNQAEGSGERHVTITGS 294
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G+ +R + I+
Sbjct: 236 DPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GSGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
G+ I A L+ L T GT
Sbjct: 293 GSPVSIALAQYLITACLETAKSTSGGTPGSGT 324
>gi|326517934|dbj|BAK07219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 632
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT--IDEI 94
+R + G VIGK G TI + + +SGAR+ + + + II +S T D++
Sbjct: 314 LRVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKN---DKEESIITVSSTEATDDV 370
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A + LL + D+ +D + LRL+VP + G +IGK G+ I + S+A+
Sbjct: 371 KSAAVEAV--LLLQAKINDETED---RMHLRLLVPGNVIGCLIGKGGSIINDMRNKSKAI 425
Query: 155 IKISR-LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
I IS+ +D LV + G +D+ AL I+L+L ED L
Sbjct: 426 IHISKGTKPRKASSSDELVEVFGEVDKLRDALVQIVLRLREDVL 469
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 33/174 (18%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI---DEI 94
R L + + G+VIGKGG IN + Q+ A++++ + +PG R+I++ + D +
Sbjct: 41 RILCPDKVIGSVIGKGGKVINSIRQQTNAKVKVV---DPYPGADKRVILVYCYVKHRDVM 97
Query: 95 LRAVDL------------------VIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSI 136
L ++ V D ++ L D +DD + ++VP S S+
Sbjct: 98 LSDINADDDDDREPVCAAQNALLKVHDAIVGALAVTDDSDD----KEANILVPASQAASV 153
Query: 137 IGKAGATIKSFMDDSQAVIKI-----SRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
IGK+G+ IK S++ IK+ S + HS D V +TG +AL
Sbjct: 154 IGKSGSVIKKLRSVSKSFIKVKPKDPSDVTHSCAMSFDNFVQITGDARAVKKAL 207
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR-SHEFFPGTTDRIIM 86
+D TE ++R LV + G +IGKGGS IND +++S A I +S+ + ++D ++
Sbjct: 386 NDETEDRMHLRLLVPGNVIGCLIGKGGSIINDMRNKSKAIIHISKGTKPRKASSSDELVE 445
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
+ G +D++ A+ ++ +L ++
Sbjct: 446 VFGEVDKLRDALVQIVLRLREDV 468
>gi|395516948|ref|XP_003762645.1| PREDICTED: poly(rC)-binding protein 4 [Sarcophilus harrisii]
Length = 338
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R ++ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMIMHGKEVGSIIGKKGETVKRIREQSCARITISEGS-----CPERITTITGSTGAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L +K LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YG V P
Sbjct: 189 GTVLLSANQGFSVQGQYGTVTP 210
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG
Sbjct: 98 SKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGV 155
Query: 91 IDEILRAVDLVIDKLL 106
D I+ V + +L
Sbjct: 156 PDAIILCVRQICAVIL 171
>gi|47216238|emb|CAG05934.1| unnamed protein product [Tetraodon nigroviridis]
Length = 613
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+P + S P +R LV GA+IGK G+TI + Q+G++I + R G
Sbjct: 136 SPNSGMPSKPPHADLPLRLLVLTQYVGAIIGKEGATIRNITKQTGSKIDIHRKEN--AGA 193
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
++ I I + + A +++D + E AD+V L+++ N+ G +IGK
Sbjct: 194 AEKPISIHSSPEGCSAACRMILDIMNQEAKDTKTADEV----PLKILAHNNFVGRLIGKE 249
Query: 141 GATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
G +K D+ I IS L D S Y +R +T+ G +D +A I+ K+ E
Sbjct: 250 GRNLKKIEQDTNTKITISSLQDLSLYN-QERTITVKGCVDGCCQAEVEIMKKVRE 303
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P + R+++++G + +A + KL
Sbjct: 464 GAIIGKKGQHIKQLSRFAGASIKIAPAES--PESKMRMVIVTGPPEAQFKAQGRIYGKLK 521
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
E + ++V +T +++ ++ G +IGK G T+ + + A + + R
Sbjct: 522 EE-NFFGPKEEVKLETHIKMAA--AAAGRVIGKGGKTVNELQNLTAAEVVVPR 571
>gi|225443912|ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 22/204 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR---IIMISGT--I 91
IR L G VIG+GGS+I + SGA +++ + DR +I ++ T +
Sbjct: 309 IRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTK------ADRDECLITVTSTESV 362
Query: 92 DEILR-AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
D++ AV+ V LL + D+ DD +RL+VP+ G IIGK+G+ I
Sbjct: 363 DDLKSMAVEAV---LLLQAKINDEDDDT---VAIRLLVPSKIIGCIIGKSGSIINEIRKR 416
Query: 151 SQAVIKISRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
++A ++IS+ + ND L+ + G + AL I+L+L +D L + T T A
Sbjct: 417 TRADVRISKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRD-TGHNTSA 475
Query: 210 GV--FFSGFHGMPYGAVPPPVPAV 231
G +SG G+ +V P P V
Sbjct: 476 GTDSLYSGGAGLSVSSVLPSAPPV 499
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 49/239 (20%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI---------- 87
R L + + G+VIGK G IN + + A+I++ + FPG DR+I I
Sbjct: 40 RILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVV---DPFPGAKDRVITIYCYVKEKEEV 96
Query: 88 ------------SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGS 135
D +L+ +++ + + E+ K + +++VP+S +
Sbjct: 97 EVDDEFNDKQPLCPAQDALLKVHAAIVNAVAS---LENSDKKKKDKEECQILVPSSQSAN 153
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTG---TLDEQMRALEL 187
+IGKAGATIK ++A IKI+ D HS D V + G + + + A+
Sbjct: 154 VIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAISA 213
Query: 188 ILLKLS--EDTLYSQTM-----------TVPYTYAGVFFSGFHGMPYGAVPPPVPAVPH 233
I+ K + E+ T+ VP AG F+ + PPV A H
Sbjct: 214 IMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPAGGFYPSADSIVSARSVPPVLAATH 272
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE-FFPGTTDRIIM 86
+D + IR LV + + G +IGK GS IN+ + ++ A +++S+S D +I
Sbjct: 381 NDEDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRISKSERPKCADANDELIE 440
Query: 87 ISGTIDEILRAVDLVIDKL 105
+ G + + A+ ++ +L
Sbjct: 441 VVGEVGSVRDALVQIVLRL 459
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
T + +++P ++ G ++GK GA I + S AVI+IS S DR+ ++GT +
Sbjct: 551 TPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEIS---DSKSSRGDRVALISGTPE 607
Query: 180 EQMRALELI 188
++ A LI
Sbjct: 608 QKRTAENLI 616
>gi|317032830|ref|XP_001394456.2| KH domain RNA binding protein [Aspergillus niger CBS 513.88]
Length = 444
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 20/163 (12%)
Query: 11 SPDVHGKRSTAPVKSLSSD------------PTEKPTYI--RFLVSNPLAGAVIGKGGST 56
+P+ G + T P++S +S P ++ ++I R ++S+ A VIGKGG
Sbjct: 70 APNSKGAQETQPIQSTASHAESTGAQSEQHRPQDESSWIHIRAVISSQEAATVIGKGGEN 129
Query: 57 INDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD 116
++ + SGA+ +S ++ G +RI+ +SG D +A L+I L E D
Sbjct: 130 VSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAAAKAFGLIIRTLNNE--PLDAPS 184
Query: 117 DVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+KT LRL++P+ GSIIGK G+ I+ D S A + S
Sbjct: 185 TAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGARLNAS 227
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P + P TY +R L+ + L G++IGKGGS I + Q SGAR L+ S
Sbjct: 172 IRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGAR--LNASDA 229
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 230 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQL 263
>gi|268574250|ref|XP_002642102.1| Hypothetical protein CBG18043 [Caenorhabditis briggsae]
Length = 839
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGAR---IQLSRSHEFFPGTTDRIIMISGTIDE 93
IR +V ++G+ G+TI D R I LS+ G +DRI+ I G ++
Sbjct: 306 IRCVVEGKYQQVIMGEHGATIRDIAQSCHCRVDFIHLSKKERMVLGNSDRILTIHGYAEQ 365
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+AV ++D + TE +D VG LRL N CG +IGK G +IK M +
Sbjct: 366 ASKAVARILDVIQTEAIKDDAM--VGADVVLRLRAHNQLCGRLIGKGGTSIKDIMQKTGT 423
Query: 154 VIKISR-----------LDHSYYGLNDRLVTLTG-TLDEQMRALELILLKLSE 194
I +S+ GL++R + + G +++ ++A LI KL +
Sbjct: 424 NITVSKHVDPPGGYQSLRQDEMLGLSERTIVIRGPSIEAVVQAESLISAKLKK 476
>gi|148704853|gb|EDL36800.1| mCG140771, isoform CRA_a [Mus musculus]
gi|149051190|gb|EDM03363.1| neuro-oncological ventral antigen 1, isoform CRA_d [Rattus
norvegicus]
Length = 180
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 109
Query: 96 RAVDLVIDKLLTEL 109
AV I + + E+
Sbjct: 110 NAVHGFIAEKIREM 123
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIE 107
>gi|45384194|ref|NP_990402.1| insulin-like growth factor 2 mRNA-binding protein 1 [Gallus gallus]
gi|82227598|sp|O42254.1|IF2B1_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1; AltName: Full=Zip code-binding protein
1; Short=ZBP-1; Short=Zipcode-binding protein 1
gi|2570921|gb|AAB82295.1| zipcode-binding protein [Gallus gallus]
Length = 576
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APVK P + P +R LV GA+IGK G+TI + Q+ ++I + R G
Sbjct: 187 APVKQ---QPVDIP--LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGA 239
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
++ I I T + A ++++ + E AD+V L+++ N+ G +IGK
Sbjct: 240 AEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEV----PLKILAHNNFVGRLIGKE 295
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------ 194
G +K D++ I IS L +R +T+ G+++ +A + I+ K+ E
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCKAEQEIMKKVREAYENDV 355
Query: 195 DTLYSQTMTVP-YTYAGVFFSGFHGMPYGAVPPPVPAV 231
+ Q+ +P A V G AVPPP +V
Sbjct: 356 AAMSLQSHLIPGLNLAAV---GLFPASSNAVPPPPSSV 390
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P E+ T F+ + + GA+IGK G I + A I+++ P + R+++I+G
Sbjct: 401 PPEQETVHVFIPAQAV-GAIIGKKGQHIKQLSRFASASIKIAPPE--TPDSKVRMVVITG 457
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ +A + KL E + ++V +T +R VP S+ G +IGK G T+ +
Sbjct: 458 PPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGKGGKTVNELQN 514
Query: 150 DSQAVIKISR 159
+ A + + R
Sbjct: 515 LTAAEVVVPR 524
>gi|350631260|gb|EHA19631.1| hypothetical protein ASPNIDRAFT_52961 [Aspergillus niger ATCC 1015]
Length = 462
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 22/164 (13%)
Query: 11 SPDVHGKRSTAPVKSLSSD------------PTEKPTYI--RFLVSNPLAGAVIGKGGST 56
+P+ G + T P++S +S P ++ ++I R ++S+ A VIGKGG
Sbjct: 70 APNSKGAQETQPIQSTASHAESTGAQSEQHRPQDESSWIHIRAVISSQEAATVIGKGGEN 129
Query: 57 INDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-LHAEDQA 115
++ + SGA+ +S ++ G +RI+ +SG D +A L+I L E L A A
Sbjct: 130 VSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAAAKAFGLIIRTLNNEPLDAPSTA 186
Query: 116 DDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+KT LRL++P+ GSIIGK G+ I+ D S A + S
Sbjct: 187 Q---SKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGARLNAS 227
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P + P TY +R L+ + L G++IGKGGS I + Q SGAR L+ S
Sbjct: 172 IRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGAR--LNASDA 229
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 230 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQL 263
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT + A
Sbjct: 397 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENS---NERLVTITGTQECNQMA 453
Query: 185 LELILLKL 192
L ++ +L
Sbjct: 454 LYMLYSRL 461
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ E + +R++ I+GT +
Sbjct: 392 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE---NSNERLVTITGTQE 448
Query: 93 EILRAVDLVIDKL 105
A+ ++ +L
Sbjct: 449 CNQMALYMLYSRL 461
>gi|148689196|gb|EDL21143.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689197|gb|EDL21144.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689198|gb|EDL21145.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
Length = 244
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 13/147 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLD 179
++++ L +S +R VT++G D
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPD 157
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL 106
I+ V + +L
Sbjct: 159 IILCVRQICAVIL 171
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR+++ GSIIGK G T+K + S A I IS +R+ T+TG+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE-----GSCPERITTITGSTAAVFH 74
Query: 184 ALELILLKLSED 195
A+ +I KL ED
Sbjct: 75 AVSMIAFKLDED 86
>gi|358367184|dbj|GAA83803.1| KH domain RNA binding protein [Aspergillus kawachii IFO 4308]
Length = 468
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 20/163 (12%)
Query: 11 SPDVHGKRSTAPVKSLSSD------------PTEKPTYI--RFLVSNPLAGAVIGKGGST 56
+P+ G + T P++S +S P ++ ++I R ++S+ A VIGKGG
Sbjct: 70 APNSKGAQETQPIQSTASHAESTGAQSEQHRPQDESSWIHIRAVISSQEAATVIGKGGEN 129
Query: 57 INDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD 116
++ + SGA+ +S ++ G +RI+ +SG D +A L+I L E D
Sbjct: 130 VSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAAAKAFGLIIRTLNNE--PLDAPS 184
Query: 117 DVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+KT LRL++P+ GSIIGK G+ I+ D S A + S
Sbjct: 185 TAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGARLNAS 227
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P + P TY +R L+ + L G++IGKGGS I + Q SGAR L+ S
Sbjct: 172 IRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGAR--LNASDA 229
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 230 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQL 263
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT + A
Sbjct: 397 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENS---NERLVTITGTQECNQMA 453
Query: 185 LELILLKLSED 195
L ++ +L +
Sbjct: 454 LYMLYSRLESE 464
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ E + +R++ I+GT +
Sbjct: 392 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE---NSNERLVTITGTQE 448
Query: 93 EILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 449 CNQMALYMLYSRLESEKH 466
>gi|440634730|gb|ELR04649.1| hypothetical protein GMDG_06931 [Geomyces destructans 20631-21]
Length = 473
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+ A VIGKGG + + SGA+ +S ++ G +RI+ +SG +D
Sbjct: 120 HIRAVISSAEAATVIGKGGENVTLIRKMSGAKCTVS---DYQKGAVERILTVSGVVDAAA 176
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E DQ ++T LRL+VP+ GSIIGK G I+ + S A
Sbjct: 177 KAFGLIIRTLNGE--PLDQPSTPQSRTYPLRLLVPHVLIGSIIGKGGVRIREIQEQSGAR 234
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D +R V + G D A + L E ++ P A ++
Sbjct: 235 LNAS--DACLPLSTERSVVVLGVADAVHIATYYVASTLLEQ--LTERFGGPTASA---YA 287
Query: 215 GFHGMPYGAVPPP---VPAVPHNTAAHYG 240
G P G +P VP VP +YG
Sbjct: 288 TRSGGPAGVIPGGMQVVPYVPQPAGGNYG 316
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+ +P ++P TY +R LV + L G++IGKGG I + Q QSGAR L+ S
Sbjct: 183 IRTLNGEPLDQPSTPQSRTYPLRLLVPHVLIGSIIGKGGVRIREIQEQSGAR--LNASDA 240
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R +++ G D + A V LL +L
Sbjct: 241 CLPLSTERSVVVLGVADAVHIATYYVASTLLEQL 274
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 402 QIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNS----NERLVTITGTAECNQM 457
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 458 ALYMLYSRLESE 469
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 397 QPLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDN---SNERLVTITGTAE 453
Query: 93 EILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 454 CNQMALYMLYSRLESEKH 471
>gi|402590061|gb|EJW83992.1| hypothetical protein WUBG_05097, partial [Wuchereria bancrofti]
Length = 210
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK G I + QSGA+I +S +RI+ I+G+I I +A ++ KL
Sbjct: 3 GSIIGKRGDHIKLIRDQSGAKINISDGS-----CPERIVTITGSIGTINKAFGMICAKLQ 57
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
+L A + T +RLIVP + CG IIGK G IK + + A I+++
Sbjct: 58 QDLQALPNSIPKPPIT-MRLIVPATQCGCIIGKGGTKIKEIREATGASIQVA--SEMLPS 114
Query: 167 LNDRLVTLTGTLD---EQMRALELILLK 191
+R VT++G+ D + MR + ILL+
Sbjct: 115 STERAVTISGSADSIVDCMRNICQILLE 142
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R +V G +IGKGG+ I + + +GA IQ+ + E P +T+R + ISG+ D
Sbjct: 71 PITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQV--ASEMLPSSTERAVTISGSADS 128
Query: 94 ILRAVDLVIDKLL 106
I+ + + LL
Sbjct: 129 IVDCMRNICQILL 141
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
GSIIGK G IK D S A I IS D S +R+VT+TG++ +A +I KL
Sbjct: 3 GSIIGKRGDHIKLIRDQSGAKINIS--DGS---CPERIVTITGSIGTINKAFGMICAKLQ 57
Query: 194 ED 195
+D
Sbjct: 58 QD 59
>gi|297740744|emb|CBI30926.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 22/204 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDR---IIMISGT--I 91
IR L G VIG+GGS+I + SGA +++ + DR +I ++ T +
Sbjct: 121 IRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTK------ADRDECLITVTSTESV 174
Query: 92 DEILR-AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
D++ AV+ V LL + D+ DD +RL+VP+ G IIGK+G+ I
Sbjct: 175 DDLKSMAVEAV---LLLQAKINDEDDDT---VAIRLLVPSKIIGCIIGKSGSIINEIRKR 228
Query: 151 SQAVIKISRLDHSYYG-LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYA 209
++A ++IS+ + ND L+ + G + AL I+L+L +D L + T T A
Sbjct: 229 TRADVRISKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRD-TGHNTSA 287
Query: 210 GV--FFSGFHGMPYGAVPPPVPAV 231
G +SG G+ +V P P V
Sbjct: 288 GTDSLYSGGAGLSVSSVLPSAPPV 311
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
T + +++P ++ G ++GK GA I + S AVI+IS S DR+ ++GT +
Sbjct: 363 TPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEIS---DSKSSRGDRVALISGTPE 419
Query: 180 EQMRALELI 188
++ A LI
Sbjct: 420 QKRTAENLI 428
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE-FFPGTTDRIIM 86
+D + IR LV + + G +IGK GS IN+ + ++ A +++S+S D +I
Sbjct: 193 NDEDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRISKSERPKCADANDELIE 252
Query: 87 ISGTIDEILRAVDLVIDKL 105
+ G + + A+ ++ +L
Sbjct: 253 VVGEVGSVRDALVQIVLRL 271
>gi|224076902|ref|XP_002305041.1| predicted protein [Populus trichocarpa]
gi|222848005|gb|EEE85552.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 7/183 (3%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
ST PV + + IR L G VIGKGGSTI + SGARI++ +
Sbjct: 290 STVPVVPSFGNTSRSELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRD 349
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
+I D AV+ + LL + D+ +D+ +R +VP+ G IIG
Sbjct: 350 ECIITVIATESPDDLKSMAVEAI---LLLQGKINDEDNDI---VGIRFLVPSKVIGCIIG 403
Query: 139 KAGATIKSFMDDSQAVIKISRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
K+GA + + A + IS++D ND LV + G + AL I+L+L +D L
Sbjct: 404 KSGAIVNEIRKRTNADVCISKVDKLKCADSNDELVEVAGEVGSVRDALVQIVLRLRDDVL 463
Query: 198 YSQ 200
+
Sbjct: 464 KEK 466
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 90/205 (43%), Gaps = 32/205 (15%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI--------SG 89
R L + + G+VIGK G IN +++S AR+++ + FPG R+I I
Sbjct: 39 RILCPDEVIGSVIGKSGKVINSIRNESRARVKVV---DPFPGAMYRVITIYCNVKEKGDA 95
Query: 90 TIDEILRAVDLVI---DKLLTELHAE---------DQADDVGTKTKLRLIVPNSSCGSII 137
+D+ D + D LL ++HA D K + +++VP S +II
Sbjct: 96 DVDDDFHQADPLCPAQDALL-KVHAAISNAVAALGDSDKRCRDKKECQILVPTSQSANII 154
Query: 138 GKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTGTLDEQMRAL---ELIL 189
GKAGATIK ++A IKI+ D HS D + +TG + +AL I+
Sbjct: 155 GKAGATIKKLRSKTRANIKITAKDASDPTHSCAMDFDNFLLITGESEAVKKALFAVSAIM 214
Query: 190 LKLSEDTLYSQTMTVPYTYAGVFFS 214
K S TVP + S
Sbjct: 215 YKFSPKEEIPLETTVPEAPPSIIIS 239
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P+ + LV G VIGKGG+ I + + SGA I++S + DRI ISG ++
Sbjct: 552 PSTLEMLVPANAVGKVIGKGGANIANIRKISGAMIEISDAKS---ARGDRIAYISGKPEQ 608
Query: 94 ILRAVDLV 101
A +L+
Sbjct: 609 KQAAENLI 616
>gi|361132042|gb|EHL03657.1| putative Poly(rC)-binding protein 2 [Glarea lozoyensis 74030]
Length = 481
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++++ A VIGKGG ++ + SGA+ +S E+ G +RI+ +SG +D
Sbjct: 120 HIRAVITSAEAATVIGKGGENVSLIRKMSGAKCTVS---EYQKGAVERILTVSGVVDAAA 176
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I L E D+A ++T LRL++P+ GSIIGK G I+ + S A
Sbjct: 177 KAFGLIIRTLNNE--ELDKASSAESRTYPLRLLIPHILIGSIIGKGGMRIREIQEASGAR 234
Query: 155 IKIS 158
+ S
Sbjct: 235 LNAS 238
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
P P H P++ L +P + + N + GA+IGKGG IN+ + SG+ I+
Sbjct: 385 PGPQSHAGPPAQPMQGLVPG---QPLTQQIFIPNDMVGAIIGKGGQKINEIRQLSGSVIK 441
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
++ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 442 INEPQD---NSNERLVTITGTQECNQMALYMLYSRLESEKH 479
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 410 QIFIPNDMVGAIIGKGGQKINEIRQLSGSVIKINEPQDNS----NERLVTITGTQECNQM 465
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 466 ALYMLYSRLESE 477
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 32 EKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
E TY +R L+ + L G++IGKGG I + Q SGAR L+ S P +T+R +++ G
Sbjct: 198 ESRTYPLRLLIPHILIGSIIGKGGMRIREIQEASGAR--LNASDACLPLSTERSLVVLGV 255
Query: 91 IDEILRAVDLVIDKLLTEL 109
D + A V L +L
Sbjct: 256 ADAVHIATYYVGSTLFEQL 274
>gi|432891068|ref|XP_004075532.1| PREDICTED: RNA-binding protein Nova-1-like [Oryzias latipes]
Length = 220
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 50/70 (71%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT++ +
Sbjct: 103 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALN 162
Query: 96 RAVDLVIDKL 105
D + +K+
Sbjct: 163 GVHDFIAEKV 172
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 104 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 163
Query: 184 ALELILLKLSE 194
+ I K+ E
Sbjct: 164 VHDFIAEKVRE 174
>gi|403286483|ref|XP_003934516.1| PREDICTED: poly(rC)-binding protein 1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286485|ref|XP_003934517.1| PREDICTED: poly(rC)-binding protein 1-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 376
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 91/177 (51%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK ++ + +SGAR +S + +RII ++G I +
Sbjct: 16 IRLLMHGKEVGSIIGKNEESVKRIREESGARFSISEGN-----CPERIITLTGPTCAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++I+KL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMMINKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLT---GTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
+++S L +S ++ +T+ ++ E ++ + L++L+ + M +PY
Sbjct: 131 VQVSGDMLPNS----TEQAITVAVVPQSVTECVQQICLVMLETLPQCPQGRVMPIPY 183
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G R+ S D + + T+ + N L G +IG+ G IN+ + SGA+I++
Sbjct: 264 SPEVKGYRA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGVNINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
+ E G++ R + I+G+ I A L+ +L +E ++VG+
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLFSEKGMGCSYNNVGS 362
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ S + P +T++ I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--SGDMLPNSTEQAIT 147
Query: 87 IS---GTIDEILRAVDLVIDKLL 106
++ ++ E ++ + LV+ + L
Sbjct: 148 VAVVPQSVTECVQQICLVMLETL 170
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ G I S A IKI+ + G + R VT+TG
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGVNINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 331
Query: 177 TLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGF 216
+ A LI +L + M Y G + F
Sbjct: 332 SAASISLAQYLINARL----FSEKGMGCSYNNVGSLHNPF 367
>gi|389751124|gb|EIM92197.1| hypothetical protein STEHIDRAFT_89021 [Stereum hirsutum FP-91666
SS1]
Length = 339
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 11/183 (6%)
Query: 17 KRSTAPVKSLSSDPTEKPTY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+ S +P +S S P + +R LVS AG +IGK G + D + Q+G + +S+
Sbjct: 10 RDSASPHQSRSPSPAGQDVLTLRALVSTKDAGVIIGKAGKNVADLRDQTGVKAGVSK--- 66
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHA-EDQADDVGTKTKLRLIVPNSSCG 134
PG +R++ ++G +D + +A L+I +L+ A + G+ T +RL++ ++ G
Sbjct: 67 VIPGVHERVLTVTGAVDSVAKAYALIIAQLVEANPASPSVSSSSGSHTSIRLLISHNLMG 126
Query: 135 SIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
+IIG+ G IK+ D S A + S+ L S +R+V + G+ + RA+E I L
Sbjct: 127 TIIGRNGLKIKAIQDGSGARMVASKDMLPQS----TERVVDVQGSPESIGRAIEEIGRCL 182
Query: 193 SED 195
ED
Sbjct: 183 LED 185
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+S+ L G +IG+ G I Q SGAR+ S+ + P +T+R++ + G+ + I R
Sbjct: 116 IRLLISHNLMGTIIGRNGLKIKAIQDGSGARMVASK--DMLPQSTERVVDVQGSPESIGR 173
Query: 97 AVDLVIDKLLTELHAEDQADDVGT 120
A++ + LL ED +GT
Sbjct: 174 AIEEIGRCLL-----EDWERGLGT 192
>gi|355709455|gb|AES03597.1| poly binding protein 4 [Mustela putorius furo]
Length = 206
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 19/176 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 29 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 83
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 84 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 143
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY 206
++++ L +S +R VT++G D A+ L + ++ L S + T+PY
Sbjct: 144 VQVAGDLLPNS----TERAVTVSGVPD----AIILCVRQICAVILESPPKGATIPY 191
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 110 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 167
Query: 94 ILRAVDLVIDKLL 106
I+ V + +L
Sbjct: 168 IILCVRQICAVIL 180
>gi|47220208|emb|CAF98973.1| unnamed protein product [Tetraodon nigroviridis]
Length = 345
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDTIFK 72
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK---TKLRLIVPNSSCGSIIGKAGATIKSFMD 149
A ++ K ++ ++ + T LRL+VP S CGS+IGK G+ IK +
Sbjct: 73 AFAMIAYKFEEDI-INSMSNSLATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRE 127
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G T+K ++S A I IS + +R+VT+TG D +
Sbjct: 18 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDTIFK 72
Query: 184 ALELILLKLSEDTLYSQT 201
A +I K ED + S +
Sbjct: 73 AFAMIAYKFEEDIINSMS 90
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D T + + N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+
Sbjct: 263 DATPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME---GSSERQITIT 319
Query: 89 GTIDEILRAVDLVIDKLLTEL 109
GT I A L+ +L +E+
Sbjct: 320 GTPANISLAQYLINARLTSEV 340
>gi|344300282|gb|EGW30622.1| hypothetical protein SPAPADRAFT_63451 [Spathaspora passalidarum
NRRL Y-27907]
Length = 374
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 23/173 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IG+ G I+ + ++ + +SR PG+ +RI+ +SG +D +
Sbjct: 83 VRVLVSAKEAGCLIGQNGKVIDGIRDETNTKAGISR---LQPGSHERILTVSGKLDNCAK 139
Query: 97 AVDLVIDKL------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
A+ L L +L A ++ T LRL+VPN+ G++IG G I
Sbjct: 140 ALSYFAQALCDSTIETYNYFPLKQLSANPCIEN--ETTILRLLVPNAQMGTLIGSKGLRI 197
Query: 145 KSFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ Q+ IS + + G N+RLV L GT+++ AL +I L ED
Sbjct: 198 QQI----QSNYHISMIASKSFLPGSNERLVELQGTVNDLYDALRIIARCLIED 246
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 40/191 (20%)
Query: 22 PVKSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P+K LS++P + T +R LV N G +IG G I Q QS I + S F PG
Sbjct: 160 PLKQLSANPCIENETTILRLLVPNAQMGTLIGSKGLRIQ--QIQSNYHISMIASKSFLPG 217
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHA------------EDQADDVGTKTKL--- 124
+ +R++ + GT++++ A+ ++ L+ ++ A Q + V T +
Sbjct: 218 SNERLVELQGTVNDLYDALRIIARCLIEDISALGNTNYYVPRGHHSQYNGVNTTNGVSST 277
Query: 125 ------------------RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
L PN G++IGK G+ I+ S A I IS G
Sbjct: 278 TPTNGRNFARKSSHIATTSLSFPNDIVGALIGKNGSRIQGVRKVSGATIGIS---EEVEG 334
Query: 167 LNDRLVTLTGT 177
N+R+ T++G+
Sbjct: 335 KNERIFTISGS 345
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 43 NPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVI 102
N + GA+IGK GS I + SGA I +S E G +RI ISG+ + +A L+
Sbjct: 301 NDIVGALIGKNGSRIQGVRKVSGATIGIS---EEVEGKNERIFTISGSPHAVEKAKGLLY 357
Query: 103 DKLLTELHAEDQAD 116
L E +A+
Sbjct: 358 HNLQREEQRRAEAE 371
>gi|260949329|ref|XP_002618961.1| hypothetical protein CLUG_00120 [Clavispora lusitaniae ATCC 42720]
gi|238846533|gb|EEQ35997.1| hypothetical protein CLUG_00120 [Clavispora lusitaniae ATCC 42720]
Length = 488
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S+ P+ S D +R A AV+GK G I + ++ RI +S + + P
Sbjct: 98 SSKPISSHKKDDDASTVSVRMYCPVKEAAAVVGKKGEKITHIREKANVRIYVSENLKNVP 157
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSII 137
+R+I + G+ +++ RA L+ +L E ED+ + +K L+L+VP+ G II
Sbjct: 158 ---ERVISVKGSAEDVARAFGLITRAILEE--PEDEPASITSKQYNLKLLVPHPMVGYII 212
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
GK+G+ + ++S A +K + Y DR++++TG D
Sbjct: 213 GKSGSKFREIEENSAAKLKAAEQALPYS--TDRVLSVTGVGD 252
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T K ++ LV +P+ G +IGK GS + + S A+ L + + P +TDR++ ++G
Sbjct: 193 TSKQYNLKLLVPHPMVGYIIGKSGSKFREIEENSAAK--LKAAEQALPYSTDRVLSVTGV 250
Query: 91 IDEILRAVDLVIDKLLT 107
D I AV + +L
Sbjct: 251 GDAIHIAVYYICSVMLA 267
>gi|326934067|ref|XP_003213117.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Meleagris gallopavo]
Length = 553
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APVK P + P +R LV GA+IGK G+TI + Q+ ++I + R G
Sbjct: 164 APVKQ---QPVDIP--LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GA 216
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
++ I I T + A ++++ + E AD+V L+++ N+ G +IGK
Sbjct: 217 AEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEV----PLKILAHNNFVGRLIGKE 272
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------ 194
G +K D++ I IS L +R +T+ G+++ +A + I+ K+ E
Sbjct: 273 GRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCKAEQEIMKKVREAYENDV 332
Query: 195 DTLYSQTMTVP-YTYAGVFFSGFHGMPYGAVPPP 227
+ Q+ +P A V G AVPPP
Sbjct: 333 AAMSLQSHLIPGLNLAAV---GLFPASSNAVPPP 363
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P E+ T F+ + + GA+IGK G I + A I+++ P + R+++I+G
Sbjct: 378 PPEQETVHVFIPAQAV-GAIIGKKGQHIKQLSRFASASIKIAPPE--TPDSKVRMVVITG 434
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ +A + KL E + ++V +T +R VP S+ G +IGK G T+ +
Sbjct: 435 PPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGKGGKTVNELQN 491
Query: 150 DSQAVIKISR 159
+ A + + R
Sbjct: 492 LTAAEVVVPR 501
>gi|6031189|ref|NP_006482.1| RNA-binding protein Nova-1 isoform 3 [Homo sapiens]
gi|114652481|ref|XP_001170491.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Pan troglodytes]
gi|332223201|ref|XP_003260756.1| PREDICTED: RNA-binding protein Nova-1-like isoform 3 [Nomascus
leucogenys]
gi|426376608|ref|XP_004055089.1| PREDICTED: RNA-binding protein Nova-1-like isoform 3 [Gorilla
gorilla gorilla]
gi|119586395|gb|EAW65991.1| neuro-oncological ventral antigen 1, isoform CRA_b [Homo sapiens]
gi|158260301|dbj|BAF82328.1| unnamed protein product [Homo sapiens]
gi|410265346|gb|JAA20639.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
gi|410293722|gb|JAA25461.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
gi|410353657|gb|JAA43432.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
Length = 181
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTEL 109
AV I + + E+
Sbjct: 110 NAVHGFIAEKIREM 123
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 184 ALELILLKLSE 194
I K+ E
Sbjct: 112 VHGFIAEKIRE 122
>gi|348668189|gb|EGZ08013.1| hypothetical protein PHYSODRAFT_339892 [Phytophthora sojae]
Length = 644
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 39/205 (19%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V L G +IG+GG TI D Q +SGA IQ+ R E P T DR + I+G D + A L
Sbjct: 196 VPRELVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTPDRFVNITGNQDALDLAQRL 255
Query: 101 VIDKLLTELHAEDQA------DDV------------GTKTKLRLIVPNSSCGSIIGKAGA 142
I L+ E A DD GT + + L+VPN G IIG+ G
Sbjct: 256 -IQNLIDERQQNQGAGGFRERDDRDRMARYGGINPDGTDS-VELLVPNERVGLIIGRGGC 313
Query: 143 TIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------ 195
TIK+ + + I + D ++ + RL+T+ GT++ + A I ++E+
Sbjct: 314 TIKAIQQRTGTSVTIPQTPDPNHPDM--RLITIRGTMEAKEAAKFEIHSMINEEPGQRHG 371
Query: 196 -------TLYSQTMTVPYTYAGVFF 213
T+Y M VP GV
Sbjct: 372 YGMASGQTIY---MQVPNDRVGVII 393
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD-RIIMISGTIDEIL 95
+ LV N G +IG+GG TI Q ++G + + ++ + P D R+I I GT+ E
Sbjct: 295 VELLVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPD--PNHPDMRLITIRGTM-EAK 351
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A I ++ E + + + + + VPN G IIGK G TIK D I
Sbjct: 352 EAAKFEIHSMINEEPGQRHGYGMASGQTIYMQVPNDRVGVIIGKRGETIKGIQDRHAVRI 411
Query: 156 KISRL 160
+I ++
Sbjct: 412 QIPQV 416
>gi|355707679|gb|AES03031.1| neuro-oncological ventral antigen 1 [Mustela putorius furo]
Length = 179
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTEL 109
AV I + + E+
Sbjct: 110 NAVHGFIAEKIREM 123
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT++
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVE 107
>gi|453080702|gb|EMF08752.1| hypothetical protein SEPMUDRAFT_151698 [Mycosphaerella populorum
SO2202]
Length = 518
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+ A VIGKGG ++ + +GA+ +S E+ G +R++ +SG +D +
Sbjct: 153 HVRAIISSAEAATVIGKGGENVSQIRKLAGAKCTVS---EYTRGAVERVLTVSGQVDAVA 209
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I + L + E+ + LRL++P+ GSIIGK G I+ + S A +
Sbjct: 210 KAFGLII-RTLNQEPLEEPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARL 268
Query: 156 KISR 159
S
Sbjct: 269 NASE 272
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G ++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT
Sbjct: 435 GQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNN---NERLVTITGTQ 491
Query: 179 DEQMRALELILLKLSEDTLYSQTM 202
+ AL ++ +L E + S ++
Sbjct: 492 ECNQMALYMLYSRLGESSKNSNSI 515
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+ +P E+P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 216 IRTLNQEPLEEPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASES-- 273
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R +++ G D + A V L+ +L
Sbjct: 274 CLPLSTERSLVVLGVADAVHIATYYVGSTLVEQL 307
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + +R++ I+GT
Sbjct: 436 QPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NNNERLVTITGT 490
>gi|255569106|ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223535201|gb|EEF36880.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 798
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + V N G +IGKGG TI Q SGA+IQ++R + P +T R + + GT+ I
Sbjct: 200 TSRKMEVPNDKVGVLIGKGGDTIRYLQYNSGAKIQITRDMDADPHSTTRPVELIGTLSSI 259
Query: 95 LRAVDLVIDKLLTELHAED----------QADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+A L I+ ++ E A A G ++ + VPN G IIG+ G TI
Sbjct: 260 SKAEKL-INAVIAEADAGGSPSLVARGLPSAQTAGVGDQIEMQVPNEKVGLIIGRGGDTI 318
Query: 145 KSFMDDSQAVIK-ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
K+ S A I+ I + +R V +TG + A E+I +S++
Sbjct: 319 KALQAKSGARIQLIPQHPPEGDASKERTVRVTGDRKQIEIAREMIKDVMSQN 370
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTL 174
DD T T ++ VPN G +IGK G TI+ +S A I+I+R +D + R V L
Sbjct: 195 DDAQT-TSRKMEVPNDKVGVLIGKGGDTIRYLQYNSGAKIQITRDMDADPHSTT-RPVEL 252
Query: 175 TGTLDEQMRALELILLKLSE 194
GTL +A +LI ++E
Sbjct: 253 IGTLSSISKAEKLINAVIAE 272
>gi|134079139|emb|CAK45951.1| unnamed protein product [Aspergillus niger]
Length = 421
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 22/164 (13%)
Query: 11 SPDVHGKRSTAPVKSLSSD------------PTEKPTYI--RFLVSNPLAGAVIGKGGST 56
+P+ G + T P++S +S P ++ ++I R ++S+ A VIGKGG
Sbjct: 70 APNSKGAQETQPIQSTASHAESTGAQSEQHRPQDESSWIHIRAVISSQEAATVIGKGGEN 129
Query: 57 INDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-LHAEDQA 115
++ + SGA+ +S ++ G +RI+ +SG D +A L+I L E L A A
Sbjct: 130 VSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAAAKAFGLIIRTLNNEPLDAPSTA 186
Query: 116 DDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+KT LRL++P+ GSIIGK G+ I+ D S A + S
Sbjct: 187 Q---SKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGARLNAS 227
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P + P TY +R L+ + L G++IGKGGS I + Q SGAR L+ S
Sbjct: 172 IRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGAR--LNASDA 229
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 230 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQL 263
>gi|149018652|gb|EDL77293.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018654|gb|EDL77295.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018655|gb|EDL77296.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018656|gb|EDL77297.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018658|gb|EDL77299.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018659|gb|EDL77300.1| rCG25644, isoform CRA_a [Rattus norvegicus]
Length = 183
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
++++ L +S +R VT++G D + + I + E+ L T P
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILEEPLSRITRASP 183
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLLTE 108
I+ V + +L E
Sbjct: 159 IILCVRQICAVILEE 173
>gi|224145055|ref|XP_002325510.1| predicted protein [Populus trichocarpa]
gi|222862385|gb|EEE99891.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G +IGKGG TI Q SGA+IQ++R E +T R + + GT+ I R + +I+ ++
Sbjct: 6 GVLIGKGGDTIRYLQYNSGAKIQITRDSEADSQSTTRPVELIGTLSSI-RNAEKLINAVI 64
Query: 107 TELHA-----------EDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
E A A G +L + VPN G IIG+ G TIK S A I
Sbjct: 65 AEADAGGSPSLVAMGLASGAQTAGVGDQLEIPVPNEKVGLIIGRGGETIKGLQAKSGARI 124
Query: 156 K-ISRLDHSYYGLNDRLVTLTGTLDEQMRALELIL 189
+ I + G +R V +TG + A E+I+
Sbjct: 125 QLIPQHLPEGDGSKERTVRVTGDKRQVEMAREMIM 159
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP---GTTDRIIMISGTIDE 93
+ V N G +IG+GG TI Q++SGARIQL H P G+ +R + ++G +
Sbjct: 93 LEIPVPNEKVGLIIGRGGETIKGLQAKSGARIQLIPQH--LPEGDGSKERTVRVTGDKRQ 150
Query: 94 ILRAVDLVID 103
+ A ++++D
Sbjct: 151 VEMAREMIMD 160
>gi|148665206|gb|EDK97622.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Mus musculus]
Length = 543
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 25/252 (9%)
Query: 7 SYVPSPDV------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
SY+P +V H R SS + +R LV GA+IGK G TI +
Sbjct: 104 SYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNI 163
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q+ +R+ + R G ++ + I T + A ++++ + E A++V
Sbjct: 164 TKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEV-- 219
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLD 179
L+++ N G +IGK G +K ++ I IS L D S Y +R +T+ GT++
Sbjct: 220 --PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTITVRGTIE 276
Query: 180 EQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPA 230
A I+ KL E + Q +P + G+F +G +P A P VP
Sbjct: 277 ACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPP 336
Query: 231 VP--HNTAAHYG 240
P H A H G
Sbjct: 337 SPPYHPFATHSG 348
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 374 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 431
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 432 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 488
Query: 157 ISR 159
+ R
Sbjct: 489 VPR 491
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A
Sbjct: 376 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQ 433
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 434 GRIFGKLKEENFFN 447
>gi|121710178|ref|XP_001272705.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
gi|119400855|gb|EAW11279.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
Length = 464
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 3 TNESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQS 62
+ E+ + S HG R+++ + +IR ++S+ A VIGKGG ++ +
Sbjct: 80 SGETQPIQSTASHGDRASSQPEQHRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRR 139
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT 122
SGA+ +S ++ G +RI+ +SG D + +A L+I L E D +KT
Sbjct: 140 LSGAKCTVS---DYSRGAVERILTVSGPQDAVAKAFGLIIRTLNNE--PLDAPSTAQSKT 194
Query: 123 -KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
LRL++P+ GSIIGK G+ I+ + S A + S
Sbjct: 195 YPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNAS 231
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P + P TY +R L+ + L G++IGKGGS I + Q SGAR L+ S
Sbjct: 176 IRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGAR--LNASDA 233
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 234 CLPLSTERSLVILGVADSVHIATYYVAVTLVEQL 267
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT + A
Sbjct: 399 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENS---NERLVTITGTQECNQMA 455
Query: 185 LELILLKL 192
L ++ +L
Sbjct: 456 LYMLYSRL 463
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ E + +R++ I+GT +
Sbjct: 394 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE---NSNERLVTITGTQE 450
Query: 93 EILRAVDLVIDKL 105
A+ ++ +L
Sbjct: 451 CNQMALYMLYSRL 463
>gi|74215286|dbj|BAE41861.1| unnamed protein product [Mus musculus]
Length = 530
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 25/252 (9%)
Query: 7 SYVPSPDV------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
SY+P +V H R SS + +R LV GA+IGK G TI +
Sbjct: 91 SYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNI 150
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q+ +R+ + R G ++ + I T + A ++++ + E A++V
Sbjct: 151 TKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEV-- 206
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLD 179
L+++ N G +IGK G +K ++ I IS L D S Y +R +T+ GT++
Sbjct: 207 --PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTITVRGTIE 263
Query: 180 EQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPA 230
A I+ KL E + Q +P + G+F +G +P A P VP
Sbjct: 264 ACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPP 323
Query: 231 VP--HNTAAHYG 240
P H A H G
Sbjct: 324 SPPYHPFATHSG 335
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 361 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 418
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 419 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 475
Query: 157 ISR 159
+ R
Sbjct: 476 VPR 478
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A
Sbjct: 363 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQ 420
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 421 GRIFGKLKEENFFN 434
>gi|354507800|ref|XP_003515942.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cricetulus griseus]
Length = 389
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 1 METNESSYV---PSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTI 57
M ++ES YV + D+ G+ ++++ + + LV GA+IGK G+TI
Sbjct: 14 MSSDESVYVVGVSAGDLGGR-----MRAIGEEEPWAVFWSWLLVPTQYVGAIIGKEGATI 68
Query: 58 NDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADD 117
+ Q+ ++I++ R G ++ I + T + A ++++ + H E +
Sbjct: 69 RNITKQTQSKIEVHRKEN--AGAAEKAISVHSTPEGCSSACKMILEIM----HKEAKDTK 122
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+ ++++ NS G +IGK G+ +K D++ I IS L H +R +T+ G
Sbjct: 123 TAHEVPVKILTHNSFVGRLIGKEGSNLKKVEQDTETKITISSLQHLTLYNPERTITVKGA 182
Query: 178 LDEQMRALELILLKLSE 194
++ RA + I+ K+ E
Sbjct: 183 IENCCRAEQEIMKKVRE 199
>gi|449531912|ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 453
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG----- 89
+ R LV G++IG+ G I ++ ARI++ + PGT +R +M+S
Sbjct: 85 SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL---DGPPGTAERAVMVSAKDEPD 141
Query: 90 -----TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATI 144
+D +LR ++D L + A + G+K RL+V S GS+IGK G T+
Sbjct: 142 SAFPPAVDGLLRVHKRIVDGLEGD---NAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTV 198
Query: 145 KSFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRALELILLKL 192
KS ++S ++++ D + L +DR+V + G +A+ELI L
Sbjct: 199 KSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHL 248
>gi|347842448|emb|CCD57020.1| similar to KH domain RNA binding protein [Botryotinia fuckeliana]
Length = 488
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++++ A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 127 HVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVS---DYQKGAVERILTVSGVVDAVA 183
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I L E E +D LRL++P+ GSIIGK G IK + S A +
Sbjct: 184 KAFGLIIRTLNNEP-LEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARL 242
Query: 156 KISRLDHSYYGLN-DRLVTLTGTLD 179
S SY L+ +R + + G D
Sbjct: 243 NAS---DSYLPLSTERSLVVLGVAD 264
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGKGG I + Q SGAR+ S S
Sbjct: 190 IRTLNNEPLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARLNASDS-- 247
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
+ P +T+R +++ G D + A V L +L
Sbjct: 248 YLPLSTERSLVVLGVADAVHIATYYVGSTLFEQL 281
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 415 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNS----NERLVTITGTAECNQM 470
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 471 ALYMLYSRLESE 482
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 410 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NSNERLVTITGTAE 466
Query: 93 EILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 467 CNQMALYMLYSRLESERH 484
>gi|225452863|ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE- 93
T R+L G++IG+GG + + + ++I++ E PG +R++ I + DE
Sbjct: 43 TVYRYLCPGRKIGSIIGRGGEIVKQLRVDTKSKIRIG---ETVPGCEERVVTIYSSSDET 99
Query: 94 ----------------ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
+ R D V+ + E+H ED + ++ +RL+VP+ G +I
Sbjct: 100 NAFDDSDTFVSPAQDALFRVHDRVVSE---EVHGEDSEE--ASQVTVRLLVPSDQIGCVI 154
Query: 138 GKAGATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
GK G I+S +S A ++I + DH S +D LV ++G +AL I +L ++
Sbjct: 155 GKGGQIIQSIRSESGAQVRILKDDHLPSCALSSDELVQISGEPSLVRKALYQIASRLHDN 214
Query: 196 TLYSQTM---TVP--YTYAGVFFSGFHGMPYGAVPPPV 228
SQ + VP Y+ G G P + P V
Sbjct: 215 PSRSQHLLASAVPTGYSSGGSLMGPTSGAPIMGLAPLV 252
>gi|403418461|emb|CCM05161.1| predicted protein [Fibroporia radiculosa]
Length = 326
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 10/182 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGK G + D + +G + +S+ PG +R++ +SG+++ + +
Sbjct: 30 LRALVSTKDAGVIIGKAGKNVADLRDHTGVKAGVSK---VVPGVHERVLTVSGSVEGVAK 86
Query: 97 AVDLVIDKLLTE-LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L++ +L++ + + T +RL++ ++ GS+IG+ G IK+ D S A +
Sbjct: 87 AYALIVSQLVSANPSSPVSPNSPPPNTAIRLLISHNLMGSVIGRNGLKIKAIQDASGARM 146
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFF 213
S+ L S +R+V + G+ + RA+E I L ED Q + + +G
Sbjct: 147 VASKDMLPQS----TERIVEVQGSSESIGRAIEEIGRCLLEDWERGQGTVLFHPGSGDER 202
Query: 214 SG 215
SG
Sbjct: 203 SG 204
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 44/201 (21%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T IR L+S+ L G+VIG+ G I Q SGAR+ S+ + P +T+RI+ + G+ + I
Sbjct: 113 TAIRLLISHNLMGSVIGRNGLKIKAIQDASGARMVASK--DMLPQSTERIVEVQGSSESI 170
Query: 95 LRAVDLVIDKLLTE---------LHAEDQADDVGTK------------------------ 121
RA++ + LL + H + G +
Sbjct: 171 GRAIEEIGRCLLEDWERGQGTVLFHPGSGDERSGRRSSNASRRYNGDAGRGRTSPSPNAP 230
Query: 122 ----TKLR---LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
T LR + +P+ G IIG+ G I S + I I++ H G +R+ T+
Sbjct: 231 LQQPTNLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETG--ERMFTI 288
Query: 175 TGTLDEQMRALELILLKLSED 195
GT + +AL L+ +L +
Sbjct: 289 VGTPEANEKALFLLYNQLESE 309
>gi|392571215|gb|EIW64387.1| cytoplasmic protein [Trametes versicolor FP-101664 SS1]
Length = 325
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
RS++PV S S +R LVS AG +IGK G + + + Q+G + +S+
Sbjct: 18 RSSSPVGSDS-------LTLRALVSTKDAGVIIGKAGKNVAELRDQTGVKAGVSK---VI 67
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK-LRLIVPNSSCGSI 136
PG +R++ ++GT++ + +A L++ +L++ + + T +RL++ ++ GS+
Sbjct: 68 PGVHERVLTVTGTVEGVAKAYSLIVSQLVSASPSSPTMSPTSSPTTAIRLLISHNLMGSV 127
Query: 137 IGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IG+ G IK+ D S A + S+ L S +R+V + G+ + RA+E I L E
Sbjct: 128 IGRNGLKIKAIQDSSGARMVASKDMLPQS----TERIVEVQGSSESIGRAIEEIGRCLLE 183
Query: 195 DTLYSQTMTVPYTYAGVFFSGFHGMP 220
D + + AG SG P
Sbjct: 184 DWERGVGTVLFHPGAGEERSGRRTHP 209
>gi|148665207|gb|EDK97623.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_d
[Mus musculus]
Length = 603
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 25/252 (9%)
Query: 7 SYVPSPDV------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
SY+P +V H R SS + +R LV GA+IGK G TI +
Sbjct: 164 SYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNI 223
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q+ +R+ + R G ++ + I T + A ++++ + E A++V
Sbjct: 224 TKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEV-- 279
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLD 179
L+++ N G +IGK G +K ++ I IS L D S Y +R +T+ GT++
Sbjct: 280 --PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTITVRGTIE 336
Query: 180 EQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPA 230
A I+ KL E + Q +P + G+F +G +P A P VP
Sbjct: 337 ACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPP 396
Query: 231 VP--HNTAAHYG 240
P H A H G
Sbjct: 397 SPPYHPFATHSG 408
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 434 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 491
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 492 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 548
Query: 157 ISR 159
+ R
Sbjct: 549 VPR 551
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A
Sbjct: 436 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQ 493
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 494 GRIFGKLKEENFFN 507
>gi|354475601|ref|XP_003500016.1| PREDICTED: poly(rC)-binding protein 2-like [Cricetulus griseus]
Length = 325
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R L+ G++I K G ++ + +SGAR +S + +RII ++G + I +A
Sbjct: 17 RLLMHGKEVGSIIAKKGESVKKMREESGARTSISDGN-----CPERIITLAGPTNAIFKA 71
Query: 98 VDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
++IDKL + + ++ LRL+VP S CGS+IGK G IK + + A +
Sbjct: 72 FAMIIDKLEEGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Query: 156 KIS 158
+++
Sbjct: 132 QVA 134
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T +SN L G +IG+ G+ IN+ + SGA+I+ + E G+TDR + I+
Sbjct: 259 DASAQTTSHELTISNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVE---GSTDRQVTIT 315
Query: 89 GTIDEI 94
G+ I
Sbjct: 316 GSAASI 321
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+ I
Sbjct: 90 STAASRPPVALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTEWAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G ++ V + +L L
Sbjct: 148 IAGIPQSLIECVKQICVVMLETL 170
>gi|298707114|emb|CBJ29906.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 308
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 26/164 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL- 95
++ LV AG +IGKGG IN Q+ + R++LS+ +EFFPGT DR+ ++ G ++
Sbjct: 124 LKVLVPGITAGCLIGKGGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALVQGEQPTLVA 183
Query: 96 RAVDLVIDKLLTELHAEDQADDVG------------------------TKTKLRLIVPNS 131
AV ++ +L QA +G + +RL+VP +
Sbjct: 184 EAVAEMLRRLREAARPTPQAPFMGGGVPYSTVHEGYGSGGLDGPHGRDAQVTIRLLVPLA 243
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL-NDRLVTL 174
+ G IIG+ G TIK+ + A + ++ D G+ ++RL ++
Sbjct: 244 AGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSI 287
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K L+++VP + G +IGK G I ++ +K+S+ + + G +DR+ + G E
Sbjct: 121 KFALKVLVPGITAGCLIGKGGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALVQG---E 177
Query: 181 Q----MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFH 217
Q A+ +L +L E T P+ GV +S H
Sbjct: 178 QPTLVAEAVAEMLRRLRE--AARPTPQAPFMGGGVPYSTVH 216
>gi|145207996|ref|NP_898850.2| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
gi|81889459|sp|Q5SF07.1|IF2B2_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|46577878|gb|AAT01428.1| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
Length = 592
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 25/252 (9%)
Query: 7 SYVPSPDV------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
SY+P +V H R SS + +R LV GA+IGK G TI +
Sbjct: 153 SYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNI 212
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q+ +R+ + R G ++ + I T + A ++++ + E A++V
Sbjct: 213 TKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEV-- 268
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLD 179
L+++ N G +IGK G +K ++ I IS L D S Y +R +T+ GT++
Sbjct: 269 --PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTITVRGTIE 325
Query: 180 EQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPA 230
A I+ KL E + Q +P + G+F +G +P A P VP
Sbjct: 326 ACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPP 385
Query: 231 VP--HNTAAHYG 240
P H A H G
Sbjct: 386 SPPYHPFATHSG 397
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 423 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 480
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 481 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 537
Query: 157 ISR 159
+ R
Sbjct: 538 VPR 540
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A
Sbjct: 425 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQ 482
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 483 GRIFGKLKEENFFN 496
>gi|326430629|gb|EGD76199.1| hypothetical protein PTSG_00905 [Salpingoeca sp. ATCC 50818]
Length = 947
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 4/163 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID- 92
P ++ +V L GA+IG+GG+ I S AR++L R G R + I G+++
Sbjct: 185 PFPVQLVVRPSLVGAIIGRGGANIRQLSQVSRARVELERRDPHL-GAVGRRVFIDGSLNN 243
Query: 93 --EILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
E RA+ ++ EL+ E+ + T +++++P G +IG+AGA+IK +
Sbjct: 244 TVEAFRALVQLMADNDVELNGEEPVEAEDRITSIQMMIPGEMVGHLIGRAGASIKYITET 303
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
S A I++ L + R+V + GT + A L+L K S
Sbjct: 304 SGAGIELLPLQYPANMSPVRIVKIEGTPRQLTHAFALMLRKFS 346
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IG+GGS I ++GA I++ S + +R ++ GT ++ +RA L+ ++
Sbjct: 406 GALIGRGGSNIKHMMEETGAEIRIQNSGDDVEEPLERDCVVRGTTEQQVRAHALIFRRMQ 465
Query: 107 TELH------AEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
E + +++D+ + + VP + G +IG+ GATI+ + +++ +
Sbjct: 466 DEQARLNIPPTDPRSNDL---FPVVMEVPAAKVGRVIGRGGATIRDIQQKTGVGVEVQQ 521
>gi|47222225|emb|CAG11104.1| unnamed protein product [Tetraodon nigroviridis]
Length = 580
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 40/264 (15%)
Query: 7 SYVP-------SPDVHGKRS---TAPVKSLSSDPTEKPTY-----IRFLVSNPLAGAVIG 51
SY+P +P G+RS P +S S +P +R LV GA+IG
Sbjct: 124 SYIPDETASPEAPSAGGRRSFNTRGPPRSGSPSLGARPKVQSDIPLRMLVPTQFVGAIIG 183
Query: 52 KGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHA 111
K G TI + Q+ ++I + R G ++ I I T + A ++D + E
Sbjct: 184 KQGDTIRNLTKQTHSKIDIHRKEN--AGAAEKPITIHSTPEGSSNACRTIMDIMQKEAID 241
Query: 112 EDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRL 171
+++ L+++V N+ G +IGK G +K D+ I IS L +R
Sbjct: 242 TKFTEEI----PLKILVHNNFVGRLIGKEGRNLKKIEQDTGTKITISSLQDLTLYNPERT 297
Query: 172 VTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP---YTYAGVFFSGFHGM--P 220
+T+ G+++ RA E ++ K+ E + Q+ +P G+F SG GM
Sbjct: 298 ITVKGSIEACGRAEEEVMKKIREAYESDVAAMNLQSNLIPGLNLNALGLFPSGSPGMGPS 357
Query: 221 YGAVPPPVPAVPHNTAAHYGPNMG 244
+VPPP AH G + G
Sbjct: 358 MSSVPPP--------GAHGGCSFG 373
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 33/174 (18%)
Query: 7 SYVPSPDVHGKRS-----------------TAPVKSLSSDPTEKPTYIRFLVSNPLAGAV 49
S VP P HG S +A ++L+ P + ++ + GA+
Sbjct: 359 SSVPPPGAHGGCSFGCSPYGVEGPLWASMMSASGQTLAGSPESETVHL--FIPTLAVGAI 416
Query: 50 IGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
IGK G I +GA I+ SR R+++I G + +A + KL E
Sbjct: 417 IGKQGQHIKQLSHFAGASIKASRKGM---DPKHRMVIIVGPPEAQFKAQCRIFGKLKEE- 472
Query: 110 HAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
+ G K +++L VP+ + G +IGK G T+ + + A + + R
Sbjct: 473 ------NFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEVVVPR 520
>gi|303282595|ref|XP_003060589.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458060|gb|EEH55358.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 445
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
Y + AG +IG GG TIN Q++SGA +++ SHE PG R I ISG +
Sbjct: 122 YEEIMCPTEAAGKIIGHGGDTINSIQAKSGAHVKIQPSHEVVPGQPRR-ITISGVPGAVA 180
Query: 96 RAVDLVIDKLL-TELH------------AEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
A LV D + TEL + ++ + VP G +IG+ G
Sbjct: 181 DAAQLVNDIIRETELKHSRASLPGGGGGGHSGGGRDSNQIEMPVPVPTEMIGRVIGRGGE 240
Query: 143 TIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELIL 189
TI+ ++S A +++ R + V + G DE RA EL+L
Sbjct: 241 TIRRLQEESGARMQVER--------DLGRVMIKGGADECTRAKELVL 279
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + G VIG+GG TI Q +SGAR+Q+ R +MI G DE RA +L
Sbjct: 226 VPTEMIGRVIGRGGETIRRLQEESGARMQVERDLGR--------VMIKGGADECTRAKEL 277
Query: 101 VIDKLLTELHAEDQADDVGTKTKLRLIVPNSSC-GSIIGKAGATIKSFMDDSQAVIKISR 159
V+D L G +R ++P C G IIGK G +I+ + A I+I +
Sbjct: 278 VLDIL--NAPPPTAGGGGGGGGTVRHVMPAGGCEGKIIGKGGDSIRDLCARTGAKIQIDK 335
Query: 160 LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-TLYSQTMTVP 205
S VT++G D+ A+ L+ + E T+Y + +P
Sbjct: 336 DAAS--------VTISGRQDQVDAAIALVQAIIDEGPTVYMKPGGLP 374
>gi|148665205|gb|EDK97621.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_b
[Mus musculus]
Length = 564
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 25/252 (9%)
Query: 7 SYVPSPDV------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
SY+P +V H R SS + +R LV GA+IGK G TI +
Sbjct: 171 SYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNI 230
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q+ +R+ + R G ++ + I T + A ++++ + E A++V
Sbjct: 231 TKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEV-- 286
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLD 179
L+++ N G +IGK G +K ++ I IS L D S Y +R +T+ GT++
Sbjct: 287 --PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTITVRGTIE 343
Query: 180 EQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPA 230
A I+ KL E + Q +P + G+F +G +P A P VP
Sbjct: 344 ACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPP 403
Query: 231 VP--HNTAAHYG 240
P H A H G
Sbjct: 404 SPPYHPFATHSG 415
>gi|148665204|gb|EDK97620.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Mus musculus]
Length = 596
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 25/252 (9%)
Query: 7 SYVPSPDV------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
SY+P +V H R SS + +R LV GA+IGK G TI +
Sbjct: 157 SYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNI 216
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q+ +R+ + R G ++ + I T + A ++++ + E A++V
Sbjct: 217 TKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEV-- 272
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLD 179
L+++ N G +IGK G +K ++ I IS L D S Y +R +T+ GT++
Sbjct: 273 --PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTITVRGTIE 329
Query: 180 EQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPA 230
A I+ KL E + Q +P + G+F +G +P A P VP
Sbjct: 330 ACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPP 389
Query: 231 VP--HNTAAHYG 240
P H A H G
Sbjct: 390 SPPYHPFATHSG 401
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 427 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 484
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 485 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 541
Query: 157 ISR 159
+ R
Sbjct: 542 VPR 544
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A
Sbjct: 429 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQ 486
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 487 GRIFGKLKEENFFN 500
>gi|301116557|ref|XP_002906007.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109307|gb|EEY67359.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 550
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 90/205 (43%), Gaps = 37/205 (18%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V L G +IG+GG TI D Q +SGA IQ+ R E P T DR + I+G D + A L
Sbjct: 188 VPRELVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTADRFVNIAGNQDTLELAQKL 247
Query: 101 VIDKLLTELHAEDQA------DDVGTKTK-----------LRLIVPNSSCGSIIGKAGAT 143
I L+ E A DD + + ++VPN G IIG+ G T
Sbjct: 248 -IQNLIDERQQNQGAGGFRERDDRDRMARYGGINPDGSDSVEIMVPNERVGLIIGRGGCT 306
Query: 144 IKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------- 195
IK+ + + I + D ++ + RL+T+ GT++ + A I +S++
Sbjct: 307 IKAIQQRTGTSVTIPQTPDPNHPEM--RLITIRGTMEAKEAAKFEIQSMVSDEPGQRHGY 364
Query: 196 ------TLYSQTMTVPYTYAGVFFS 214
T+Y M VP GV
Sbjct: 365 GATSGQTIY---MQVPNDRVGVIIG 386
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 14/130 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD------RIIMISGT 90
+ +V N G +IG+GG TI Q ++G + + P T D R+I I GT
Sbjct: 287 VEIMVPNERVGLIIGRGGCTIKAIQQRTGTSVTI-------PQTPDPNHPEMRLITIRGT 339
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+ E A I ++++ + + + + VPN G IIGK G TIK D
Sbjct: 340 M-EAKEAAKFEIQSMVSDEPGQRHGYGATSGQTIYMQVPNDRVGVIIGKRGETIKGIQDR 398
Query: 151 SQAVIKISRL 160
I+I ++
Sbjct: 399 HAVRIQIPQV 408
>gi|297277399|ref|XP_001107850.2| PREDICTED: hypothetical protein LOC716859 [Macaca mulatta]
Length = 494
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDV------------GTKTKLRLI 127
TT+R+ ++ GT E L AV I + + E+ +V + +LI
Sbjct: 49 TTERVCLVQGTA-EALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLI 107
Query: 128 VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALEL 187
VPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+
Sbjct: 108 VPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSA 166
Query: 188 ILLKLSEDTLYSQTMTVPYT-YAG-VFFSGFHGMPYGA 223
I+ K+ ED S + + Y AG V S G PY +
Sbjct: 167 IVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYAS 204
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
++ + +V N AG +IGKGG+T+ QSGA +QLS+ E +R++ +SG
Sbjct: 99 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEP 157
Query: 92 DEILRAVDLVIDKL 105
+++ +AV ++ K+
Sbjct: 158 EQVHKAVSAIVQKV 171
>gi|357621941|gb|EHJ73587.1| hypothetical protein KGM_22691 [Danaus plexippus]
Length = 431
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 17/165 (10%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK G + F+ +SGA+I +S +RI+ ++G I +A L+ K
Sbjct: 7 GSIIGKKGEIVKRFREESGAKINISDGS-----CPERIVTVTGNTSSIFKAFTLICKKF- 60
Query: 107 TELHAEDQADDVGTKT--KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV---IKISRLD 161
E ++ G++ LRLIVP S CGS+IGK G+ IK D + + + L
Sbjct: 61 EEWCSQFNEGGGGSRAPITLRLIVPASQCGSLIGKGGSKIKEIRDVTGRLYVHVASEMLP 120
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
+S +R VT++GT D + + I + E + T+PY
Sbjct: 121 NS----TERAVTISGTCDAITQCIYHICCVMLESP--PKGATIPY 159
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V N L G +IGKGG+ I + + SGA I++S E G+TDR I ISG D + A L
Sbjct: 284 VPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGSTDRTITISGNPDSVALAQYL 343
Query: 101 V 101
+
Sbjct: 344 I 344
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ P +R +V G++IGKGGS I + + +G R+ + + E P +T+R + ISGT
Sbjct: 74 SRAPITLRLIVPASQCGSLIGKGGSKIKEIRDVTG-RLYVHVASEMLPNSTERAVTISGT 132
Query: 91 IDEILRAV 98
D I + +
Sbjct: 133 CDAITQCI 140
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
+ VPN G IIGK G I S A+I+IS + G DR +T++G D A
Sbjct: 282 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGSTDRTITISGNPDSVALAQ 341
Query: 186 ELI 188
LI
Sbjct: 342 YLI 344
>gi|336376793|gb|EGO05128.1| hypothetical protein SERLA73DRAFT_174106 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389739|gb|EGO30882.1| hypothetical protein SERLADRAFT_455154 [Serpula lacrymans var.
lacrymans S7.9]
Length = 335
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 89/165 (53%), Gaps = 10/165 (6%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R LVS AG +IGK G + D + Q+G + +S+ PG +R++ ISG+++
Sbjct: 29 PLSLRALVSTKEAGVIIGKAGKNVADLREQTGVKAGVSK---VIPGVHERVLAISGSVEA 85
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTK-TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
+ +A ++ +L+T + + T +RL++ ++ G+IIG++G IK+ D S
Sbjct: 86 VAKAYTIITSQLVTSSSSLVSSPPPSLSHTVIRLLISHNLMGTIIGRSGLKIKAIQDVSG 145
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
A + S+ L S +R+V + GT + RA+E I L ED
Sbjct: 146 ARMVASKDMLPQS----TERIVEVQGTPEAIGRAIEEIGRCLLED 186
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T IR L+S+ L G +IG+ G I Q SGAR+ S+ + P +T+RI+ + GT + I
Sbjct: 115 TVIRLLISHNLMGTIIGRSGLKIKAIQDVSGARMVASK--DMLPQSTERIVEVQGTPEAI 172
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGT 120
RA++ + LL ED +GT
Sbjct: 173 GRAIEEIGRCLL-----EDWERGLGT 193
>gi|449447567|ref|XP_004141539.1| PREDICTED: uncharacterized protein LOC101203078 [Cucumis sativus]
gi|449481514|ref|XP_004156205.1| PREDICTED: uncharacterized LOC101203078 [Cucumis sativus]
Length = 787
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 21/138 (15%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + V N G +IGK G TI Q SGA+IQ+ R E P R + I GT + I
Sbjct: 187 TTYKMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEADPNRLTRPVEIIGTSENI 246
Query: 95 LRAVDLV---------------IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+A +L+ I + LT H+ + T +++L VPN G IIG+
Sbjct: 247 KKAEELINAVIAEADAGGSPSLIARGLTSSHS------IATAEQIQLQVPNEKVGLIIGR 300
Query: 140 AGATIKSFMDDSQAVIKI 157
G TIKS S A I++
Sbjct: 301 GGETIKSLQTRSGARIQL 318
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 112 EDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRL 171
+DQ T ++ VPNS G +IGKAG TI+ +S A I+I R + R
Sbjct: 177 QDQPSSESETTTYKMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEADPNRLTRP 236
Query: 172 VTLTGTLDEQMRALELILLKLSE 194
V + GT + +A ELI ++E
Sbjct: 237 VEIIGTSENIKKAEELINAVIAE 259
>gi|406866225|gb|EKD19265.1| KH domain RNA binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 545
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++++ A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG +D
Sbjct: 121 HIRAVITSAEAATVIGKGGENVSSIRKMSGAKCTVS---DYQKGAVERILTVSGVVDAAA 177
Query: 96 RAVDLVIDKLLTE-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A L+I L E L A A +KT LRL++P+ GSIIGK G I+ + S A
Sbjct: 178 KAFGLIIRTLNNEPLEAPSSAQ---SKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGA 234
Query: 154 VIKIS 158
+ S
Sbjct: 235 RLNAS 239
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGKGG I + Q SGAR+ S S
Sbjct: 184 IRTLNNEPLEAPSSAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGARLNASDS-- 241
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R +++ G D + A V L +L
Sbjct: 242 CLPLSTERSLVVLGVADAVHIATYYVGSTLFEQL 275
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 406 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNS----NERLVTITGTAECNQM 461
Query: 184 ALELILLKL 192
AL ++ +L
Sbjct: 462 ALYMLYSRL 470
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 401 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NSNERLVTITGTAE 457
Query: 93 EILRAVDLVIDKLLTELHAEDQADD 117
A+ ++ +L E A DD
Sbjct: 458 CNQMALYMLYSRL--ERKAPHLKDD 480
>gi|449277028|gb|EMC85335.1| Insulin-like growth factor 2 mRNA-binding protein 1, partial
[Columba livia]
Length = 519
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 142 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISIHSTPEGCSA 199
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 200 ACKMILEIMQKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 255
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G+++ RA + I+ K+ E
Sbjct: 256 ISSLQDLTLYNPERTITVKGSIENCCRAEQEIMKKVRE 293
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 142 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKAISIHSTPEGCSA 199
Query: 184 ALELILLKLSEDTLYSQT 201
A ++IL + ++ ++T
Sbjct: 200 ACKMILEIMQKEAKDTKT 217
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P E+ T F+ + + GA+IGK G I + A I+++ P + R+++I+G
Sbjct: 345 PPEQETVHVFIPAQAV-GAIIGKKGQHIKQLSRFASASIKIAPPE--TPDSKVRMVVITG 401
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ +A + KL E + ++V +T +R VP S+ G +IGK G T+ +
Sbjct: 402 PPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGKGGKTVNELQN 458
Query: 150 DSQAVIKISR 159
+ A + + R
Sbjct: 459 LTAAEVVVPR 468
>gi|448533092|ref|XP_003870552.1| hypothetical protein CORT_0F01960 [Candida orthopsilosis Co 90-125]
gi|380354907|emb|CCG24423.1| hypothetical protein CORT_0F01960 [Candida orthopsilosis]
Length = 384
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 25/189 (13%)
Query: 22 PVKSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P+K LSS P + T +R L+ N G +IG G+ I Q Q I + S F PG
Sbjct: 197 PLKQLSSTPCVEHETTILRLLIPNSQMGTLIGARGARIQ--QIQHNFAISMIASKSFLPG 254
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT-------------KTKLRL 126
+ +R++ + GT+D++ A+ ++ L+ ED + VGT K+ +
Sbjct: 255 SNERLVELQGTVDDLYDALRIISRCLI-----EDFSSSVGTTTYYVPKSHQLTRKSTATI 309
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALE 186
PN G++IGK G+ I+ S A+I I + G ++R+ T+TGT +A
Sbjct: 310 SFPNDMVGALIGKNGSRIQGVRKVSGAMIGIGE---AVEGSDERVFTITGTQQAVEKAKS 366
Query: 187 LILLKLSED 195
L+ L +
Sbjct: 367 LLYHNLERE 375
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG +IG+ G I+ + ++ + +SR GT +RI+ +SG +D+ +A
Sbjct: 121 RVLVSAKEAGCLIGQNGKVIDSIREETNTKAGISR---LIAGTHERILTVSGKLDDCAKA 177
Query: 98 VDLVIDKLLTE---------LHAEDQADDVGTKTK-LRLIVPNSSCGSIIGKAGATIKSF 147
+ LL L V +T LRL++PNS G++IG GA I+
Sbjct: 178 LSYFAQALLGSSIETYNYFPLKQLSSTPCVEHETTILRLLIPNSQMGTLIGARGARIQQI 237
Query: 148 MDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSED 195
Q IS + + G N+RLV L GT+D+ AL +I L ED
Sbjct: 238 ----QHNFAISMIASKSFLPGSNERLVELQGTVDDLYDALRIISRCLIED 283
>gi|212529012|ref|XP_002144663.1| KH domain RNA binding protein [Talaromyces marneffei ATCC 18224]
gi|210074061|gb|EEA28148.1| KH domain RNA binding protein [Talaromyces marneffei ATCC 18224]
Length = 461
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 23/173 (13%)
Query: 3 TNESSYVPSPDVHGKRSTAPVKSLSS-------DPTEKPT--------YIRFLVSNPLAG 47
TN S V DV T P++S +S P + T +IR ++S+ A
Sbjct: 57 TNGDSVVNGKDVSSATDTQPIQSTASHADRATSQPPQNQTPQDESSWIHIRAVISSQEAA 116
Query: 48 AVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLT 107
IGKGG ++ + SGA+ +S ++ G +RI+ +SG D + +A L+I L
Sbjct: 117 TCIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAVAKAFGLIIRTLNN 173
Query: 108 E-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
E L A A +KT LRL++P+ GSIIGK G I+ + S A + S
Sbjct: 174 EPLEAPSTAQ---SKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGARLNAS 223
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGKGG I + Q SGAR L+ S
Sbjct: 168 IRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGAR--LNASDA 225
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R +++ G D + A V L+ +L
Sbjct: 226 CLPLSTERSLVVLGVADAVHIATYYVAVTLVEQL 259
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 9 VPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARI 68
P HG ST P+ + S +P + + N + GA+IGKGG+ IN+ + SG+ I
Sbjct: 365 APHAQPHGA-STQPLAGVVSS---QPITQQIYIPNDMVGAIIGKGGTKINEIRHLSGSVI 420
Query: 69 QLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+++ E + +R++ I+GT + A+ ++ +L +E H
Sbjct: 421 KINEPQE---NSNERLVTITGTQECNQMALYMLYARLESEKH 459
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +PN G+IIGK G I S +VIKI+ + N+RLVT+TGT + A
Sbjct: 390 QIYIPNDMVGAIIGKGGTKINEIRHLSGSVIKINEPQENS---NERLVTITGTQECNQMA 446
Query: 185 LELILLKLSED 195
L ++ +L +
Sbjct: 447 LYMLYARLESE 457
>gi|294655167|ref|XP_457273.2| DEHA2B07238p [Debaryomyces hansenii CBS767]
gi|199429743|emb|CAG85274.2| DEHA2B07238p [Debaryomyces hansenii CBS767]
Length = 486
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 20/191 (10%)
Query: 1 METNESSYVPSPDVHG---------KRSTAPVKSLSSDPTEKPTYIRFLVSNPL--AGAV 49
ET ES P+ + S+ PV S + PTY+ F + P+ A V
Sbjct: 66 QETEESHKAPNDEAEAFTDDASTTTDASSKPV-SNHREKERDPTYVMFRMYCPVKEASTV 124
Query: 50 IGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
+GK G IN + ++ RI +S + + P +RI+ + G + + RA L+ +L E
Sbjct: 125 VGKKGEKINHIRDKANVRINVSENLKNVP---ERIVSVRGPAENVARAFGLITRTILEE- 180
Query: 110 HAEDQ-ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
ED+ A + + L+L++P+ G IIGK G + ++S A +K + Y
Sbjct: 181 -PEDEPASMLSRQYNLKLLIPHPMVGYIIGKQGVKFREIEENSAAKLKAAEQPLPYS--T 237
Query: 169 DRLVTLTGTLD 179
DR++++TG D
Sbjct: 238 DRILSITGVGD 248
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L+ +P+ G +IGK G + + S A+ L + + P +TDRI+ I+G D I
Sbjct: 195 LKLLIPHPMVGYIIGKQGVKFREIEENSAAK--LKAAEQPLPYSTDRILSITGVGDAIHI 252
Query: 97 AV 98
A+
Sbjct: 253 AI 254
>gi|345309017|ref|XP_001516066.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 679
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 18/234 (7%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P S P + P +R LV GA+IGK G TI + Q+ +++ + R G
Sbjct: 261 PGSSTQPKPLDFP--LRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKEN--AGAA 316
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAG 141
++ I I T + A L+++ + E A+++ L+++ NS G +IGK G
Sbjct: 317 EKPITIHATPEGSSEACRLILEIMQKEADETKSAEEI----PLKILAHNSLVGRLIGKEG 372
Query: 142 ATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------ 195
+K D+ I IS L +R +T+ G+++ A I+ KL E
Sbjct: 373 RNLKKIEQDTGTKITISPLQDLTIYNPERTITVKGSIEACSNAEVEIMKKLREAYENDVV 432
Query: 196 TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVP-PPVPAVPHNTAAHYGPNMGG 245
+ Q +P + G+F +G +P A P A P+N A + P + G
Sbjct: 433 AVNQQANLIPGLNLSALGIFSTGLSMLPSTAGPHGATAASPYNPFASHSPYLSG 486
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G I +GA I+++ + P ++R+++I+G + +
Sbjct: 508 VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEG--PDASERMVIITGPPEAQFK 565
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + K + + VP+S+ G +IGK G T+ + + A +
Sbjct: 566 AQGRIFGKLKEENFFNPKEE---VKLEAHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVI 622
Query: 157 ISR 159
+ R
Sbjct: 623 VPR 625
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 110 HAEDQADDVGTKTK-------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
H+ +Q G+ T+ LR++VP G+IIGK G TIK+ +Q+ + I R ++
Sbjct: 253 HSREQGQYPGSSTQPKPLDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKEN 312
Query: 163 SYYGLNDRLVTLTGTLDEQMRALELIL 189
+ G ++ +T+ T + A LIL
Sbjct: 313 A--GAAEKPITIHATPEGSSEACRLIL 337
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK G IK + A IKI+ + ++R+V +TG + Q +
Sbjct: 508 VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGP--DASERMVIITGPPEAQFK 565
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 566 AQGRIFGKLKEENFFN 581
>gi|302655788|ref|XP_003019678.1| hypothetical protein TRV_06307 [Trichophyton verrucosum HKI 0517]
gi|291183415|gb|EFE39033.1| hypothetical protein TRV_06307 [Trichophyton verrucosum HKI 0517]
Length = 483
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 12/159 (7%)
Query: 5 ESSYVPSPDVHGKRSTAPVKSLSSDPTEKPT---YIRFLVSNPLAGAVIGKGGSTINDFQ 61
E+ + S H R+T+ +S P + T +IR ++S+ A VIGKGG ++ +
Sbjct: 99 ETQPIQSTASHNDRATS-NPPTTSQPAQDETGWVHIRAVISSAEAATVIGKGGENVSQIR 157
Query: 62 SQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-LHAEDQADDVGT 120
SGA+ +S ++ G +RI+ +SG D + +A L+I L E L A A +
Sbjct: 158 RLSGAKCTVS---DYSRGAVERILTVSGMQDAVAKAFGLIIRTLNNEPLEAPSTAQ---S 211
Query: 121 KT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
KT LRL++P+ GSIIGK+G I+ + S A + S
Sbjct: 212 KTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNAS 250
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 195 IRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDS-- 252
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 253 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQL 286
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 418 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNS----NERLVTITGTQECNQM 473
Query: 184 ALELILLKL 192
AL ++ +L
Sbjct: 474 ALYMLYSRL 482
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 413 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQD---NSNERLVTITGTQE 469
Query: 93 EILRAVDLVIDKL 105
A+ ++ +L
Sbjct: 470 CNQMALYMLYSRL 482
>gi|195131533|ref|XP_002010205.1| GI15803 [Drosophila mojavensis]
gi|193908655|gb|EDW07522.1| GI15803 [Drosophila mojavensis]
Length = 596
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 12/182 (6%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ GA+IG+ G+TI QS AR+ + R G+ ++ I I G + A +++
Sbjct: 86 MVGAIIGRQGTTIRTITQQSRARVDVHRKENV--GSLEKSITIYGNPENCTNACKRILEV 143
Query: 105 LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHS 163
+ E + ++ + L+++ N+ G IIGK+G TIK M D+ I +S + D +
Sbjct: 144 MQQEALSTNKGEIC-----LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN 198
Query: 164 YYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGA 223
+ L +R++T+ G ++ RA I KL + P + + F G H M +
Sbjct: 199 SFNL-ERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS---LMFPGLHPMAMMS 254
Query: 224 VP 225
P
Sbjct: 255 TP 256
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 82/224 (36%), Gaps = 53/224 (23%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G+TI + +I +S ++ +RII + G I+ + R
Sbjct: 158 LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKGLIENMSR 217
Query: 97 AVDLVIDKLLTELHAEDQA-----------------DDVGTKTKLRLIVPNSSCGS---- 135
A + + KL + QA G +P SC S
Sbjct: 218 AENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMS 277
Query: 136 ------------------------------IIGKAGATIKSFMDDSQAVIKISRLDHS-- 163
IIG G+ I+S M S A +KI+ LD
Sbjct: 278 KTPASVVPPAFPNDMQETTFLYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKP 337
Query: 164 YYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYT 207
+R VT+ GT + Q +A +I K+ E+ T V T
Sbjct: 338 LDQQTERKVTIVGTPEGQWKAQYMIFEKMREEGFMCGTDDVRLT 381
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLS--RSHEFFPGTTDRIIMISGTIDEILRAV 98
+ N GA+IG GS I S A ++++ + + T+R + I GT + +A
Sbjct: 300 IPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQ 359
Query: 99 DLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
++ +K+ E DDV + + L+V +S G IIGK G ++ + +VIK+
Sbjct: 360 YMIFEKMREEGFMCG-TDDV--RLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL 415
>gi|281341187|gb|EFB16771.1| hypothetical protein PANDA_007698 [Ailuropoda melanoleuca]
Length = 323
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 15/157 (9%)
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G T+ + +SGARI +S + +RI+ I+G D I +A ++ K ++
Sbjct: 6 GETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFKAFAMIAYKFEEDIINSM 60
Query: 114 QADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYGLND 169
+K LRL+VP S CGS+IGK G+ IK + + A ++++ L +S +
Sbjct: 61 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNS----TE 116
Query: 170 RLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 117 RAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 151
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 57 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 114
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 115 TERAVTISGTPDAIIQCVKQICVVML 140
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 260 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 316
Query: 98 VDLV 101
L+
Sbjct: 317 QYLI 320
>gi|194222666|ref|XP_001498933.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Equus caballus]
Length = 620
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 217 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 274
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 275 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 330
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---Y 206
IS L D S Y +R +T+ GT++ A I+ KL E + Q +P
Sbjct: 331 ISSLQDLSIYN-PERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNL 389
Query: 207 TYAGVFFSGFHGMPYGAVPPPVPAVP--HNTAAHYG 240
+ G+F +G +P A P VP P H A H G
Sbjct: 390 SALGIFSTGLSMLPPPAGPRGVPPAPPYHPFATHSG 425
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 451 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 508
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 509 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 565
Query: 157 ISR 159
+ R
Sbjct: 566 VPR 568
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 451 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 508
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 509 AQGRIFGKLKEENFFN 524
>gi|326469510|gb|EGD93519.1| KH domain RNA binding protein [Trichophyton tonsurans CBS 112818]
gi|326478964|gb|EGE02974.1| KH domain RNA binding protein [Trichophyton equinum CBS 127.97]
Length = 483
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 12/159 (7%)
Query: 5 ESSYVPSPDVHGKRSTAPVKSLSSDPTEKPT---YIRFLVSNPLAGAVIGKGGSTINDFQ 61
E+ + S H R+T+ +S P + T +IR ++S+ A VIGKGG ++ +
Sbjct: 99 ETQPIQSTASHNDRATS-NPPTTSQPAQDETGWVHIRAVISSAEAATVIGKGGENVSQIR 157
Query: 62 SQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-LHAEDQADDVGT 120
SGA+ +S ++ G +RI+ +SG D + +A L+I L E L A A +
Sbjct: 158 RLSGAKCTVS---DYSRGAVERILTVSGMQDAVAKAFGLIIRTLNNEPLEAPSTAQ---S 211
Query: 121 KT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
KT LRL++P+ GSIIGK+G I+ + S A + S
Sbjct: 212 KTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNAS 250
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 195 IRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDS-- 252
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 253 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQL 286
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 418 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNS----NERLVTITGTQECNQM 473
Query: 184 ALELILLKL 192
AL ++ +L
Sbjct: 474 ALYMLYSRL 482
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 413 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQD---NSNERLVTITGTQE 469
Query: 93 EILRAVDLVIDKL 105
A+ ++ +L
Sbjct: 470 CNQMALYMLYSRL 482
>gi|255732373|ref|XP_002551110.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131396|gb|EER30956.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 576
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 5 ESSYVP--SPDVHGKRSTAPVKSLSSD-PTEKPTYIRFLVSNPL--AGAVIGKGGSTIND 59
E +YVP S + H + ++ K +S+ + PT++ F + P+ A A++GK G TI+
Sbjct: 144 EPAYVPEASTESHAEEPSSSSKPISNHREKDDPTFVSFRMYCPVKEASAIVGKKGETISH 203
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG 119
+ ++ RI +S + G +RI+ + G + + RA L+ +L E ED+ +
Sbjct: 204 LREKAAVRITVS---DNLKGVPERIVTVKGPAENVARAFGLITRVILNE--PEDEPASIN 258
Query: 120 T-KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
+ + L+L++P+ G IIGK+G + ++S A +K + Y DR++++ G
Sbjct: 259 SLQYNLKLLIPHPLIGFIIGKSGLKFREIEENSAAKLKAAETPLPYS--TDRVLSVMGVG 316
Query: 179 D 179
D
Sbjct: 317 D 317
>gi|315050398|ref|XP_003174573.1| Poly(rC)-binding protein 3 [Arthroderma gypseum CBS 118893]
gi|311339888|gb|EFQ99090.1| Poly(rC)-binding protein 3 [Arthroderma gypseum CBS 118893]
Length = 489
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 12/159 (7%)
Query: 5 ESSYVPSPDVHGKRSTAPVKSLSSDPTEKPT---YIRFLVSNPLAGAVIGKGGSTINDFQ 61
E+ + S H R+T+ +S P + T +IR ++S+ A VIGKGG ++ +
Sbjct: 99 ETQPIQSTASHNDRATS-NPPATSQPAQDETGWVHIRAVISSAEAATVIGKGGENVSQIR 157
Query: 62 SQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-LHAEDQADDVGT 120
SGA+ +S ++ G +RI+ +SG D + +A L+I L E L A A +
Sbjct: 158 RLSGAKCTVS---DYSRGAVERILTVSGMQDAVAKAFGLIIRTLNNEPLEAPSTAQ---S 211
Query: 121 KT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
KT LRL++P+ GSIIGK+G I+ + S A + S
Sbjct: 212 KTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNAS 250
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 418 QIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNS----NERLVTITGTQECNQM 473
Query: 184 ALELILLKLSE 194
AL ++ +L +
Sbjct: 474 ALYMLYSRLGK 484
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 195 IRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDS-- 252
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 253 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQL 286
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 413 QPLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NSNERLVTITGTQE 469
Query: 93 EILRAVDLVIDKL 105
A+ ++ +L
Sbjct: 470 CNQMALYMLYSRL 482
>gi|302509454|ref|XP_003016687.1| hypothetical protein ARB_04979 [Arthroderma benhamiae CBS 112371]
gi|327303250|ref|XP_003236317.1| KH domain RNA binding protein [Trichophyton rubrum CBS 118892]
gi|291180257|gb|EFE36042.1| hypothetical protein ARB_04979 [Arthroderma benhamiae CBS 112371]
gi|326461659|gb|EGD87112.1| KH domain RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 483
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 12/159 (7%)
Query: 5 ESSYVPSPDVHGKRSTAPVKSLSSDPTEKPT---YIRFLVSNPLAGAVIGKGGSTINDFQ 61
E+ + S H R+T+ +S P + T +IR ++S+ A VIGKGG ++ +
Sbjct: 99 ETQPIQSTASHNDRATS-NPPTTSQPAQDETGWVHIRAVISSAEAATVIGKGGENVSQIR 157
Query: 62 SQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-LHAEDQADDVGT 120
SGA+ +S ++ G +RI+ +SG D + +A L+I L E L A A +
Sbjct: 158 RLSGAKCTVS---DYSRGAVERILTVSGMQDAVAKAFGLIIRTLNNEPLEAPSTAQ---S 211
Query: 121 KT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
KT LRL++P+ GSIIGK+G I+ + S A + S
Sbjct: 212 KTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNAS 250
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 195 IRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDS-- 252
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 253 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQL 286
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 418 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNS----NERLVTITGTQECNQM 473
Query: 184 ALELILLKL 192
AL ++ +L
Sbjct: 474 ALYMLYSRL 482
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 413 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQD---NSNERLVTITGTQE 469
Query: 93 EILRAVDLVIDKL 105
A+ ++ +L
Sbjct: 470 CNQMALYMLYSRL 482
>gi|258574629|ref|XP_002541496.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901762|gb|EEP76163.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 491
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 110/243 (45%), Gaps = 20/243 (8%)
Query: 5 ESSYVPSPDVHGKRST--APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQS 62
E+ + S H R+T AP +S + +IR ++S+ A IGKGG ++ +
Sbjct: 100 ETQPIQSTASHNDRATSQAPGQSHGTQDETGFIHIRAVISSAEAATCIGKGGENVSQIRR 159
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-LHAEDQADDVGTK 121
SGA+ +S ++ G +RI+ +SG D + +A L+I L E L A A +K
Sbjct: 160 LSGAKCTVS---DYTRGAVERILTVSGPQDAVAKAFGLIIRTLNNEPLDAPSTAQ---SK 213
Query: 122 T-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
T LRL++P+ GSIIGK+G I+ + S A + S D +R + + G D
Sbjct: 214 TYPLRLLIPHILIGSIIGKSGVRIREIQEHSGARLNAS--DSCLPLSTERSLVILGVADA 271
Query: 181 QMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPP---VPAVPHNTAA 237
A + L E ++ P A ++ G P G +P VP VP
Sbjct: 272 VHIATYYVAATLVEQ--LTERFGGPAASA---YATRSGGPAGVIPGGMQVVPYVPQPAGG 326
Query: 238 HYG 240
YG
Sbjct: 327 QYG 329
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 418 QIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNS----NERLVTITGTQECNQM 473
Query: 184 ALELILLKLSE 194
AL ++ +L E
Sbjct: 474 ALYMLYSRLGE 484
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS 71
P HG P + + + P + + N + GA+IGKGG+ IN+ + SG+ I+++
Sbjct: 396 PHSHG----TPAQPMGAPVAGGPLTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKIN 451
Query: 72 RSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ + +R++ I+GT + A+ ++ +L
Sbjct: 452 EPQD---NSNERLVTITGTQECNQMALYMLYSRL 482
>gi|432848574|ref|XP_004066413.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 349
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P+K S IR L+ G++IGK G T+ + SGARI +S +
Sbjct: 3 PIKVQSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEGN-----CP 57
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGK 139
+RI+ I +A ++ K ++ +K LRL+VP S CGS+IGK
Sbjct: 58 ERIVTXXXXXXXIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGK 117
Query: 140 AGATIKSFMDDSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
G+ IK + + A ++++ L +S +R VT++G + ++ ++ I + + E
Sbjct: 118 GGSKIKEMRESTGAQVQVAGDMLPNS----TERAVTISGAPEAIIQCVKQICVVMLESP- 172
Query: 198 YSQTMTVPY----TYAGVFFSG--FHGMPYGA 223
+ T+PY V FSG P GA
Sbjct: 173 -PKGATIPYRPKPASTPVIFSGGQVRADPLGA 203
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + + + N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+
Sbjct: 260 DASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME---GSSERQITIT 316
Query: 89 GTIDEILRAVDLV 101
GT I A L+
Sbjct: 317 GTPANISLAQYLI 329
>gi|395334662|gb|EJF67038.1| cytoplasmic protein [Dichomitus squalens LYAD-421 SS1]
Length = 327
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 89/162 (54%), Gaps = 10/162 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGK G + + + Q+G + +S+ PG +R++ ++G+++ + +
Sbjct: 31 LRALVSTKDAGVIIGKAGKNVAELREQTGVKAGVSK---VIPGVHERVLTVTGSVEGVAK 87
Query: 97 AVDLVIDKLLT-ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L++ +L++ + ++ T +RL++ ++ GS+IG+ G IK+ D S A +
Sbjct: 88 AYSLIVSQLVSANPSSPVTSNSSSPTTAIRLLISHNLMGSVIGRNGLKIKAIQDSSGARM 147
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S+ L S +R+V + G+ + RA+E I L ED
Sbjct: 148 VASKDMLPQS----TERIVEVQGSSESIGRAIEEIGRCLLED 185
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T IR L+S+ L G+VIG+ G I Q SGAR+ S+ + P +T+RI+ + G+ + I
Sbjct: 114 TAIRLLISHNLMGSVIGRNGLKIKAIQDSSGARMVASK--DMLPQSTERIVEVQGSSESI 171
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGT---------------------------------- 120
RA++ + LL ED VGT
Sbjct: 172 GRAIEEIGRCLL-----EDWERGVGTVLFHPGTGDERSGRRTHPTGRRANGDGRGRTSPS 226
Query: 121 --------KTKLR---LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
T LR + +P+ G IIG+ G I S + I I++ H G +
Sbjct: 227 PNSPSSPQGTNLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETG--E 284
Query: 170 RLVTLTGTLDEQMRALELILLKLSED 195
R+ T+ GT + +AL L+ +L +
Sbjct: 285 RMFTIVGTPEANEKALFLLYNQLESE 310
>gi|348557851|ref|XP_003464732.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2-like
[Cavia porcellus]
Length = 368
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 58/93 (62%), Gaps = 8/93 (8%)
Query: 17 KRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
+R T P+K E +++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F
Sbjct: 96 RRETPPLK-------EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 148
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
+PGTT+R+ ++ GT E L AV I + + E+
Sbjct: 149 YPGTTERVCLVQGTA-EALNAVHSFIAEKVREI 180
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 285 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 344
Query: 97 AVDLVIDKLLTE 108
A L+ ++ E
Sbjct: 345 AQYLISQRVTYE 356
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
L++++P+ + GSIIGK G TI ++ A IK+S+ Y G +R+ + GT +
Sbjct: 109 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 168
Query: 184 ALELILLKLSEDTLYSQTMTVP 205
I K+ E Q MT P
Sbjct: 169 VHSFIAEKVRE---IPQAMTKP 187
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 271 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 329
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 330 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 357
>gi|328783034|ref|XP_624673.3| PREDICTED: far upstream element-binding protein 1-like [Apis
mellifera]
Length = 735
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 41/190 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDE 93
+ LV G VIGKGG I Q+++GAR+Q + E PG DR ++SG +++
Sbjct: 303 VEVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPG--DRKCIVSGKHQAVEQ 360
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLR---------------------------- 125
+ + + +ID + + +D ++GT++ R
Sbjct: 361 VRQRIQELIDSV---MRRDDGRSNMGTRSGPRGNGFSNNRNPNEYGGWDRRQGGPMQDKI 417
Query: 126 ---LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
VP+S CG IIGK G TIK + A ++ R + S N+++ + G ++
Sbjct: 418 ETTFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNE--NEKIFIIRGNPEQVE 475
Query: 183 RALELILLKL 192
A + KL
Sbjct: 476 HAKRIFSEKL 485
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 32/182 (17%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR---IQLSRSHEFFPGTTDRIIMISGT 90
P ++ ++ P G +IGKGG TI Q +SGA+ IQ S E ++ + I+G
Sbjct: 197 PGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQE-----QEKPLRITGD 251
Query: 91 IDEILRA----VDLVIDKLLTELHAEDQADD--------------VGTKTKLRLIVPNSS 132
++ A +L+ +K + H + D GT + ++VP ++
Sbjct: 252 PQKVEYAKQLVYELIAEKEMQMFHRGSRGSDRSGNYSNDSNFNHGSGTTDGVEVLVPRAA 311
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
G +IGK G IK ++ A ++ + G DR ++G + +A+E + ++
Sbjct: 312 VGVVIGKGGDMIKKIQAETGARVQFQQGRED--GPGDRKCIVSG----KHQAVEQVRQRI 365
Query: 193 SE 194
E
Sbjct: 366 QE 367
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + + G +IG+GG I QS++G +IQ++ S P +R+ ++G+ + + RA +L
Sbjct: 114 VPDNMVGLIIGRGGEQITRLQSETGCKIQMA-SESGLP---ERVCTLTGSREAVNRAKEL 169
Query: 101 VIDKLLTELHAEDQADDVGTKTK-------LRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
V+ + E D G+ + +++P G IIGK G TIK + S A
Sbjct: 170 VLSIVNQRSRTEGIGDMSGSSGGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGA 229
Query: 154 VI 155
+
Sbjct: 230 KM 231
>gi|119585581|gb|EAW65177.1| poly(rC) binding protein 4, isoform CRA_f [Homo sapiens]
Length = 244
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 13/147 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLD 179
++++ L +S +R VT++G D
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPD 157
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLLTEL 109
I+ V + +L L
Sbjct: 159 IILCVRQICAVILEVL 174
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR+++ GSIIGK G T+K + S A I IS +R+ T+TG+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 184 ALELILLKLSED 195
A+ +I KL ED
Sbjct: 75 AVSMIAFKLDED 86
>gi|452821097|gb|EME28131.1| hypothetical protein isoform 1 [Galdieria sulphuraria]
gi|452821098|gb|EME28132.1| hypothetical protein isoform 2 [Galdieria sulphuraria]
Length = 590
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 10/137 (7%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLV----- 101
G +IGK G TI D Q +SGA I++ +E T +R I++SG+++ + A +L+
Sbjct: 330 GMIIGKRGETIRDLQYRSGASIRVVPDNEVSVNTVERPIIVSGSLESVELAHNLINDIVN 389
Query: 102 --IDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
I++L +L +E + LR+ +PN G +IGK+G+TI+ S A I++++
Sbjct: 390 EGIERLGGDL-SESKTLYPSASISLRIQIPNDKVGWLIGKSGSTIRELQQRSGARIQVAK 448
Query: 160 LDHSYYGLNDRLVTLTG 176
S ++ R VT+TG
Sbjct: 449 --PSETDIHTRSVTITG 463
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 24 KSLSSDPTEKPTYIRF---LVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+S+SS+ E P I+ V G +IGKGG TI + +SGA +++ R + +
Sbjct: 108 QSVSSEMGENPDDIKMDFIEVPKEAVGFIIGKGGETIKELSMKSGAYMEVER-RDIDASS 166
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAED--QADDVGTKTKLRLIVPNSSCGSIIG 138
+R+ I G + I A L+++K+ L + VG+ + L +P G IIG
Sbjct: 167 ANRLFRIQGISNHIQLAKQLILEKVAGVLVGQSVCSVTSVGS-IQSELWIPMDRVGVIIG 225
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE----QMRALELILL--KL 192
G TIKS + SQ I + + L ++LVT+ G E +M E+I ++
Sbjct: 226 IGGQTIKSLEEQSQTTIVVH--NEKVNALGEKLVTIVGKPQEVHIAEMLIQEIIQKPSRV 283
Query: 193 SEDTLYSQTMTVPYTYAGVF 212
TLYS M TY G+
Sbjct: 284 MNATLYSPVMG-QTTYPGLV 302
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD---RIIMISGTIDE 93
+R + N G +IGK GSTI + Q +SGARIQ+++ P TD R + I+G
Sbjct: 413 LRIQIPNDKVGWLIGKSGSTIRELQQRSGARIQVAK-----PSETDIHTRSVTITGPPPF 467
Query: 94 ILRAVDLVIDKL 105
+ A L+ +KL
Sbjct: 468 VEIAKQLIAEKL 479
>gi|393905262|gb|EJD73914.1| hypothetical protein LOAG_18700 [Loa loa]
Length = 228
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK G I + QSGA+I +S +RI+ I+G+ I +A ++ KL
Sbjct: 14 GSIIGKRGDHIKLIRDQSGAKINISDG-----SCPERIVTITGSTGTINKAFIMICAKLQ 68
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
+L A + T +RLIVP + CG IIGK G+ IK + + A I+++
Sbjct: 69 QDLQALPNSIPKPPIT-MRLIVPATQCGCIIGKGGSKIKEIREATGASIQVA--SEMLPS 125
Query: 167 LNDRLVTLTGTLD---EQMRALELILLK 191
+R VT++G+ D + MR + ILL+
Sbjct: 126 STERAVTISGSADSIVDCMRNICQILLE 153
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
+++L + + P +R +V G +IGKGGS I + + +GA IQ+ + E P +T+
Sbjct: 71 LQALPNSIPKPPITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQV--ASEMLPSSTE 128
Query: 83 RIIMISGTIDEILRAVDLVIDKLL 106
R + ISG+ D I+ + + LL
Sbjct: 129 RAVTISGSADSIVDCMRNICQILL 152
>gi|47221037|emb|CAG12731.1| unnamed protein product [Tetraodon nigroviridis]
Length = 412
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 28/169 (16%)
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK------------------ 121
TT+R+ +I GT++ + + + +K+ + + + V
Sbjct: 4 TTERVCLIQGTVEALNGVHNFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQVRPAL 63
Query: 122 -------TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
+ +LIVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT+
Sbjct: 64 LHPPFPLSAAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEG-INLQERVVTI 122
Query: 175 TGTLDEQMRALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
+G ++ +A+E+I+ K+ ED S + + Y+ V S G PY
Sbjct: 123 SGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSNITGPVANSNPTGSPY 171
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+ +
Sbjct: 329 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGS-QAATQ 387
Query: 97 AVDLVIDKLLT 107
A +I + +T
Sbjct: 388 AAQYLISQRIT 398
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V N AG +IGKGG+T+ QSGA +QLS+ E +R++ ISG ++ +A
Sbjct: 74 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTISGEPEQNRKA 132
Query: 98 VDLVIDKL 105
V++++ K+
Sbjct: 133 VEIIVQKI 140
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A LV LL TE AE G K + + VP + G+I+GK G T+ + + + A I
Sbjct: 307 ASPLVASSLLATEKLAE------GAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARI 360
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
+IS+ G +R VT+TG+ A LI +++
Sbjct: 361 QISKKGEFIPGTRNRKVTITGSQAATQAAQYLISQRIT 398
>gi|399218143|emb|CCF75030.1| unnamed protein product [Babesia microti strain RI]
Length = 363
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 23/159 (14%)
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH------AEDQA------ 115
++LS + FFP T DRI+ ISG+ + +A+ L+IDK+ H AE +
Sbjct: 1 MKLSSTTTFFPNTQDRILTISGSEQSVCKAILLIIDKICLPYHSVHSRIAECEETLHFLD 60
Query: 116 DDVGTK----TK----LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL 167
D + T+ TK ++LIVP SS SIIGK G+ I++ D I + + G
Sbjct: 61 DSMNTRYNKATKSDISVKLIVPKSSISSIIGKGGSRIRTIQDTLNCRIHVY---NRASGT 117
Query: 168 NDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++R+V G LD +A+ ++L DT + +V Y
Sbjct: 118 SERIVVSIGELDSLKKAVIALVLIFQNDTNLKEYASVTY 156
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T+ ++ +V ++IGKGGS I Q RI + + GT++RI++ G
Sbjct: 71 TKSDISVKLIVPKSSISSIIGKGGSRIRTIQDTLNCRIHV---YNRASGTSERIVVSIGE 127
Query: 91 IDEILRAVDLVI-----DKLLTEL-------------HAEDQADDV------GTKTKLRL 126
+D + +AV ++ D L E H D V T K+ +
Sbjct: 128 LDSLKKAVIALVLIFQNDTNLKEYASVTYPSTPNSYKHHTTYIDIVNKLELTNTICKISI 187
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALE 186
+P +S S+IG G+++ + + IKI D + G N R VTLTG++ A
Sbjct: 188 NIPEASVSSVIGPNGSSLDQVIGATGTQIKIFPKDPTTSGSNYRKVTLTGSVAAVHIAHA 247
Query: 187 LILLKL 192
LIL+K+
Sbjct: 248 LILMKI 253
>gi|406608142|emb|CCH40576.1| Poly(rC)-binding protein 2 [Wickerhamomyces ciferrii]
Length = 457
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 13/170 (7%)
Query: 16 GKRSTAPVKSLSSDPTEK---PTYIRF--LVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
G S+ +++SS + PTY+ F L A V+GKGG I+ + SG RI +
Sbjct: 63 GGESSEGSRAISSHKVHQDGDPTYVHFRMLCQVKEAALVVGKGGEKISHIKEVSGTRINV 122
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVP 129
S E G T+R+I + G + + +A L+ +L E E+ V + L+L++P
Sbjct: 123 S---ENIRGVTERVIHVRGPAENVAKAFGLMTRAILDE--EENVPSTVDSHHFALQLLIP 177
Query: 130 NSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+ G +IGK G K ++S A K++ HS DR +T+ G D
Sbjct: 178 HQVIGYVIGKQGGKFKEIEENSAA--KLNASSHSMPFSTDRCLTIAGVAD 225
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L+ + + G VIGK G + + S A++ S SH P +TDR + I+G D I
Sbjct: 172 LQLLIPHQVIGYVIGKQGGKFKEIEENSAAKLNAS-SHSM-PFSTDRCLTIAGVADSIHI 229
Query: 97 AVDLVIDKLLT 107
A V +LT
Sbjct: 230 ATYYVAQTVLT 240
>gi|291405848|ref|XP_002719162.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein
1-like, partial [Oryctolagus cuniculus]
Length = 570
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 191 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISIHSTPEGCSS 248
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 249 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 304
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 305 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 342
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 386 AAPYSSFMQAPEQE--VVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 441
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 442 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 498
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 499 GGKTVNELQNLTAAEVVVPR 518
>gi|156375798|ref|XP_001630266.1| predicted protein [Nematostella vectensis]
gi|156217283|gb|EDO38203.1| predicted protein [Nematostella vectensis]
Length = 688
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T + V + G VIGKGG TI Q++SGAR+Q + + + P ++DR+ + G+ ++I
Sbjct: 344 TTLEIPVPRDVVGFVIGKGGETIKRIQAESGARVQFNPAKD-NPNSSDRMATVQGSQEQI 402
Query: 95 LRAVDLVIDKLLTELHA---------EDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ V+ +I+++++++ + A+ G T L + VP + CG IIGK G TIK
Sbjct: 403 QK-VEKIINEIISQVESRQRGGPPPRGPPANMPGINT-LEMPVPGNKCGLIIGKGGETIK 460
Query: 146 SFMDDSQAVIKISR 159
+ S A ++++R
Sbjct: 461 QIIAVSGAHVELNR 474
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRS-HEFFPGTTDRIIMISGTIDEILRAVD 99
+ N G VIG+GG IN QS++GARIQ++ DR + I GT+ + +A
Sbjct: 163 IPNKYVGLVIGRGGEQINKLQSETGARIQVAPDPPAGMMSPPDRSVTIGGTVQAVEKA-K 221
Query: 100 LVIDKLLTELHAEDQADDVGT----KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
V++K+ E D V + + +++P S G IIGK G TIK+ + +Q +
Sbjct: 222 QVLNKICEEGKIPDSLMSVPVVAPGEQVIEMMIPASKVGLIIGKGGETIKNLQERAQCRM 281
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
+ + D Y ++ + + G R +L+ L+E L
Sbjct: 282 VMVQ-DGPYANAPEKPLRIMGDNTRCQRGKDLVTDLLTEKEL 322
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 25 SLSSDPTEKP--TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD 82
SL S P P I ++ G +IGKGG TI + Q ++ R+ + + + +
Sbjct: 236 SLMSVPVVAPGEQVIEMMIPASKVGLIIGKGGETIKNLQERAQCRMVMVQDGP-YANAPE 294
Query: 83 RIIMISGTIDEILRAVDLVIDKLLTELHAEDQA---DDVGTK--------TKLRLIVPNS 131
+ + I G R DLV D LLTE E D +G + T L + VP
Sbjct: 295 KPLRIMGDNTRCQRGKDLVTD-LLTEKELEQSKPALDFLGKRQDNRQLGATTLEIPVPRD 353
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELIL 189
G +IGK G TIK +S A ++ + + +DR+ T+ G+ EQ++ +E I+
Sbjct: 354 VVGFVIGKGGETIKRIQAESGARVQFNPAKDNPNS-SDRMATVQGS-QEQIQKVEKII 409
>gi|326428680|gb|EGD74250.1| hypothetical protein PTSG_12419 [Salpingoeca sp. ATCC 50818]
Length = 619
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 34/193 (17%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G VIGKGG TIN Q QSGAR+Q+ + F ++ + ++G D I RA LV D +
Sbjct: 206 GMVIGKGGETINRLQEQSGARLQVIQDDPF---AQEKPLRMTGRRDAIERAKQLVKDLID 262
Query: 107 TE------------LHAEDQADDVGT--KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
E L + D +++ K+ + VP + G +IG+ G +IK +S
Sbjct: 263 PEPEHDPMYPSTMGLSSGDIVNNLSAYRSKKVEIKVPRVAVGRVIGRGGDSIKRIQAESG 322
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS------------Q 200
A ++ + + R+ T+TGT+ + A E +++ + +D S +
Sbjct: 323 ARVQFEPETNQDF----RIATITGTMPV-IEAAEKMIMDIIQDAEVSTSSARPRDDRPRE 377
Query: 201 TMTVPYTYAGVFF 213
M VP AG+
Sbjct: 378 PMPVPQERAGLII 390
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTD--RIIMISGTIDEILRAVDLVIDK 104
G VIG+GG +I Q++SGAR+Q F P T RI I+GT+ I A +++D
Sbjct: 304 GRVIGRGGDSIKRIQAESGARVQ------FEPETNQDFRIATITGTMPVIEAAEKMIMDI 357
Query: 105 LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSY 164
+ + A + + + VP G IIG+ G +I+ M S A +++ R +
Sbjct: 358 IQDAEVSTSSARPRDDRPREPMPVPQERAGLIIGRGGESIRMIMQQSGAHVELDRAQPAV 417
Query: 165 YGLNDRLVTLTGTLDEQMRALELILLKL 192
G D+ ++G ++ A LI KL
Sbjct: 418 NG--DKTFWISGDPEQIATAKRLIQEKL 443
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
A V + S+ P + V AG +IG+GG +I QSGA ++L R+ G
Sbjct: 361 AEVSTSSARPRDDRPREPMPVPQERAGLIIGRGGESIRMIMQQSGAHVELDRAQPAVNG- 419
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLR 125
D+ ISG ++I A L+ +KL +A G +R
Sbjct: 420 -DKTFWISGDPEQIATAKRLIQEKLDAHRRPPPRAMQSGPPGGMR 463
>gi|170084019|ref|XP_001873233.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650785|gb|EDR15025.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 318
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 12/164 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGK G + D + Q+G + +S+ PG +R++ ++G ++ + +
Sbjct: 3 LRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSK---VIPGVHERVLTVTGPVEAVAK 59
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK---TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
A L+I +L+ + T +RL++ ++ G+IIG++G IK+ D S A
Sbjct: 60 AYTLIISQLVISNPSSPVTPSSSPSSLHTSIRLLISHNLMGTIIGRSGLKIKAIQDGSGA 119
Query: 154 VIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ S+ L S +R+V + G+ + RA+E I L ED
Sbjct: 120 RMVASKEMLPQS----TERVVEVQGSPEAIGRAVEEIGKCLLED 159
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T IR L+S+ L G +IG+ G I Q SGAR+ S+ E P +T+R++ + G+ + I
Sbjct: 88 TSIRLLISHNLMGTIIGRSGLKIKAIQDGSGARMVASK--EMLPQSTERVVEVQGSPEAI 145
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGT 120
RAV+ + LL ED +GT
Sbjct: 146 GRAVEEIGKCLL-----EDWERGLGT 166
>gi|297791069|ref|XP_002863419.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297309254|gb|EFH39678.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 15/172 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI---DE 93
I+ + S+ G VIGKGGSTI + SG+ I+++ S D +I ++ T D
Sbjct: 318 IKVICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANH--DDDCVITVTATESPDDL 375
Query: 94 ILRAVDLVIDKLLTE-LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
AV+ V+ LL E ++ ED+ K K++L+VP+ G IIGK+G+ I ++
Sbjct: 376 KSMAVEAVL--LLQEKINDEDEE-----KVKMQLLVPSKVIGCIIGKSGSIISEIRKRTK 428
Query: 153 AVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTM 202
A I IS+ ++ ND LV ++G + + AL I+L+L +D L + +
Sbjct: 429 ANIHISKGNNKPKCADPNDELVEISGEVSDVRDALIQIVLRLRDDVLRDREI 480
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 37/188 (19%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI------ 91
R L + + G+VIGK G IN + ++ ARI++ + FPG ++R+I I ++
Sbjct: 46 RILCPSGVMGSVIGKSGKVINLIRQETRARIKVV---DPFPGCSERVITIFCSVTEKKDI 102
Query: 92 ------------------DEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSC 133
D +L+ D ++ L T AE+ D + RL+VP+S C
Sbjct: 103 IDIEHSELNYSIPLCSAQDALLKVHDAIVASLATA--AENTKIDRDDIRECRLLVPSSQC 160
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTG---TLDEQMRAL 185
++IGK+G+ IK ++A +K+ D H+ D +V ++G ++ + + A+
Sbjct: 161 SNVIGKSGSIIKKIRSRTRANVKVVSKDVSDPSHTCAMDFDNIVLISGESESVKKALFAV 220
Query: 186 ELILLKLS 193
I+ K+S
Sbjct: 221 SAIMYKVS 228
>gi|402592326|gb|EJW86255.1| hypothetical protein WUBG_02833 [Wuchereria bancrofti]
Length = 313
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 114/235 (48%), Gaps = 42/235 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV++ AGA+IGK G ++ + Q++ A + + S T +R++ + ++ +++
Sbjct: 42 LRLLVTSRGAGAIIGKKGESVKNIQTECDATVSVPDSQ-----TPERVVQLVAAVENVVK 96
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
V+++I + + E+H D+ ++L+++V S G++IG+ G+ IK +++ +K
Sbjct: 97 CVEMIIAR-IDEVH-----DNQDRDSELKVLVHQSHAGAVIGRGGSRIKELREENGVDLK 150
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE----------DTLYSQTMTVPY 206
+ +R++ + G ++ + L I+ L E ++++ M V
Sbjct: 151 V--YSECCPQSTERIIQINGKPEKIVACLVTIINTLKEIPIKGPSRPYESIFFDPM-VAN 207
Query: 207 TYAGVFFSGFH---GM------------PYGAVPPPVPAVPHNTAAHYGPN-MGG 245
Y G ++G H GM PYG+VPP P TA PN +GG
Sbjct: 208 EYGG--YAGDHSGRGMRGYGPRGRIPLPPYGSVPPAYDDGPLETAQVTVPNELGG 260
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D ++ + ++ LV AGAVIG+GGS I + + ++G + L E P +T+RII I+
Sbjct: 110 DNQDRDSELKVLVHQSHAGAVIGRGGSRIKELREENG--VDLKVYSECCPQSTERIIQIN 167
Query: 89 GTIDEILRAVDLVIDKL 105
G ++I+ + +I+ L
Sbjct: 168 GKPEKIVACLVTIINTL 184
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K +LRL+V + G+IIGK G ++K+ + A + + +R+V L ++
Sbjct: 39 KYELRLLVTSRGAGAIIGKKGESVKNIQTECDATVSVPDSQTP-----ERVVQLVAAVEN 93
Query: 181 QMRALELILLKLSE 194
++ +E+I+ ++ E
Sbjct: 94 VVKCVEMIIARIDE 107
>gi|241956872|ref|XP_002421156.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223644499|emb|CAX41315.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 533
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 119/268 (44%), Gaps = 36/268 (13%)
Query: 1 METNESSYVPSPDVHG-KRSTA------PVKSLSSDPTEKPTYIRFLVSNPL--AGAVIG 51
ET E +YVP H +++TA PV + + PT+I+ + P+ A ++G
Sbjct: 119 QETLEPAYVPPESDHADEQNTASSSSSKPVSNHRD--RDDPTFIQLRMYCPVKEASTIVG 176
Query: 52 KGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHA 111
+ G TIN + ++ RI +S E G +RI+ + G + + RA L+ +L E
Sbjct: 177 RKGETINHLREKANVRITVS---ENLKGVPERIVAVKGPAENVARAFGLITRVILEE--P 231
Query: 112 EDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDR 170
ED+ + ++ L+L++P+ G IIGK G + ++S A +K + Y DR
Sbjct: 232 EDEPASITSQQYNLKLLIPHPMIGFIIGKQGLKFREIEENSAAKLKAAENPLPYS--TDR 289
Query: 171 LVTLTGTLDEQMRALELI---------LLKLSEDTLYSQTMTVPYTYAGVFFSGFH---- 217
++++ G D A+ I +LK ++ LY+ P + + H
Sbjct: 290 VLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKNKVVLYNPANYQPTDHQNLGGRQRHPPNN 349
Query: 218 ----GMPYGAVPPPVPAVPHNTAAHYGP 241
M Y A PP PH++ P
Sbjct: 350 SYNNPMGYQAKLPPFSKPPHHSQHQQSP 377
>gi|392873506|gb|AFM85585.1| heterogeneous nuclear ribonucleoprotein K [Callorhinchus milii]
Length = 424
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 109/261 (41%), Gaps = 41/261 (15%)
Query: 2 ETNESSYVPS----PDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTI 57
ETN SS PS P A +S ++D + +R L+ + AGAVIGKGG I
Sbjct: 14 ETNGSSLSPSSCKRPAEDHDEEQAFKRSRNND---QCVELRLLLQSKNAGAVIGKGGKNI 70
Query: 58 NDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADD 117
++ A + + S +RI+ I+ I+ I + ++ L H + + D
Sbjct: 71 KSLRTDYNASVSVPDSS-----GPERILSINADIETIGDILSKIVPTLEEYQHYKGKDFD 125
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLT 175
+LR++V S GSIIG G IK + +Q IK+ + HS DR+V L
Sbjct: 126 C----ELRMLVHQSQAGSIIGVKGVKIKELRESTQTTIKLFQECCPHS----TDRVVLLG 177
Query: 176 GTLDEQMRALELILLKLSED-----------TLYSQTMTVPYTYAGVFF----SGFHGMP 220
G D + +++I+ LSE Y +T Y Y G G GMP
Sbjct: 178 GKPDRVVECIKIIMGLLSESPVKGRAQPYDPNFYDET----YDYGGFTMMFDERGRRGMP 233
Query: 221 YGAVPPPVPAVPHNTAAHYGP 241
+G P P GP
Sbjct: 234 FGPRGRGGPHPPSPGYERRGP 254
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A
Sbjct: 360 LAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNA 409
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 353 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 409
Query: 185 LELI 188
L+
Sbjct: 410 QYLL 413
>gi|322698027|gb|EFY89801.1| hypothetical protein MAC_04233 [Metarhizium acridum CQMa 102]
Length = 456
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + S A+ +S ++ G +RI+ +SG
Sbjct: 109 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVS---DYQKGAVERILTVSGI----- 160
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A L+I L E E A +KT LRL++P+ GSIIGK GA I+ + S A
Sbjct: 161 -AFGLIIRTLNNEPLGE--ASTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR 217
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 218 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNERFGGPAASAYA 270
Query: 215 GFHGMPYGAVPPP---VPAVPHNTAAHYG 240
G P G++P VP P + HYG
Sbjct: 271 TRSGAPAGSIPGGMQVVPYSPQPASGHYG 299
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 35 TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S P +++R +++ G D
Sbjct: 184 TYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS--CLPMSSERSLVVMGVADA 241
Query: 94 ILRAVDLVIDKLLTELH 110
+ A V LL +L+
Sbjct: 242 VHIATYYVGSTLLEQLN 258
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 385 QIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNS----NERLVTITGTEECNRM 440
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 441 ALYMLYSRLESE 452
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 381 PLTQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQD---NSNERLVTITGTEEC 437
Query: 94 ILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 438 NRMALYMLYSRLESEKH 454
>gi|344231257|gb|EGV63139.1| hypothetical protein CANTEDRAFT_93908 [Candida tenuis ATCC 10573]
Length = 562
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 10/151 (6%)
Query: 32 EKPTYIRFLVSNPL--AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
E PT + F + P+ AG ++GK G IN + ++ ++ +S + G +RI+ + G
Sbjct: 136 EDPTVVSFRMYCPVKEAGLIVGKKGEQINHIRDRANVKVFVS---DNIKGVPERIVTVRG 192
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFM 148
+ + + +A L + +L E ED+A + + + LRL++P+ G IIGK G+ +
Sbjct: 193 SAENVAKAFGLAVRAILDE--PEDEASSINSSSYDLRLLIPHPLVGYIIGKQGSKFREIE 250
Query: 149 DDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++S A +K + Y DR++ + G D
Sbjct: 251 ENSAAKLKAAETPLPYS--TDRILLINGVSD 279
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ +PL G +IGK GS + + S A+++ + + P +TDRI++I+G D I
Sbjct: 226 LRLLIPHPLVGYIIGKQGSKFREIEENSAAKLKAAETP--LPYSTDRILLINGVSDAIHI 283
Query: 97 AVDLVIDKLLTELHA 111
AV V +L A
Sbjct: 284 AVYYVAQVVLEHKDA 298
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV---IKISRLDHSYYG-----LNDR 170
G K + V N+S GS+IGK G IK + S I+ R D G LN R
Sbjct: 472 GDKYNQDVFVANNSIGSVIGKGGNNIKQIRETSGCTYVKIEPDRGDTMMLGGGRGRLNMR 531
Query: 171 LVTLTGTLDEQMRALELILLKLSED 195
+TLTG+L+ A+ LI +++ D
Sbjct: 532 KLTLTGSLNSINTAIYLINQRINTD 556
>gi|146422870|ref|XP_001487369.1| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 7 SYVPSPDV-HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGA--VIGKGGSTINDFQSQ 63
+Y P P H ++ P+ + ++ PTY+ F + P+ A VIGK G IN + +
Sbjct: 171 AYDPVPFANHLDYTSRPMANHQAERELDPTYVSFRMYCPVKEASFVIGKRGDMINHLREK 230
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT- 122
+ ARIQ+S E +RII++ G + + +A L+ +L E ED+ + ++
Sbjct: 231 ANARIQVS---ENIKDVQERIILVKGPAENVAKAFGLITRAILEE--PEDEPASIMSRQY 285
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
L++++P+ G IIGK G+ + ++S A +K + + DR++++ G D
Sbjct: 286 NLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLKAA--EQPLPNSTDRVLSVLGVGD 340
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 23 VKSLSSDPTEKPTYI-------RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++ +P ++P I + L+ +P+ G +IGKGGS + + S A+ L + +
Sbjct: 266 TRAILEEPEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAAK--LKAAEQ 323
Query: 76 FFPGTTDRIIMISGTIDEILRAV 98
P +TDR++ + G D I A+
Sbjct: 324 PLPNSTDRVLSVLGVGDAIHIAI 346
>gi|156030905|ref|XP_001584778.1| hypothetical protein SS1G_14233 [Sclerotinia sclerotiorum 1980]
gi|154700624|gb|EDO00363.1| hypothetical protein SS1G_14233 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 487
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 12/147 (8%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++++ A VIGKGG ++ + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 128 HVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVS---DYQKGAVERILTVSGVVDAVA 184
Query: 96 RAVDLVIDKLLTE-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A L+I L E L A D +KT LRL++P+ GSIIGK G I+ + S A
Sbjct: 185 KAFGLIIRTLNNEPLEA---PSDSNSKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGA 241
Query: 154 VIKISRLDHSYYGLN-DRLVTLTGTLD 179
+ S SY L+ +R + + G D
Sbjct: 242 RLNAS---DSYLPLSTERSLVVLGVAD 265
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGKGG I + Q SGAR+ S S
Sbjct: 191 IRTLNNEPLEAPSDSNSKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGARLNASDS-- 248
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
+ P +T+R +++ G D + A V L +L
Sbjct: 249 YLPLSTERSLVVLGVADAVHIATYYVGSTLFEQL 282
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 414 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNS----NERLVTITGTAECNQM 469
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 470 ALYMLYSRLENE 481
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 409 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NSNERLVTITGTAE 465
Query: 93 EILRAVDLVIDKLLTELH 110
A+ ++ +L E H
Sbjct: 466 CNQMALYMLYSRLENERH 483
>gi|345564609|gb|EGX47569.1| hypothetical protein AOL_s00083g77 [Arthrobotrys oligospora ATCC
24927]
Length = 459
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R L+++ A VIGKGG + + S A+ +S E+ G +RI+ +SG +D +
Sbjct: 104 HVRALITSAEAATVIGKGGENVTQIRRLSEAKCTVS---EYTRGAVERILTVSGGVDAVA 160
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
+A L+I + +E + A +KT LRL++P+ GSIIGK G I+ D S A
Sbjct: 161 KAFGLIIRTINSEPLSS--ASTQNSKTFPLRLLIPHILIGSIIGKGGMRIREIQDASGAR 218
Query: 155 IKIS 158
+ S
Sbjct: 219 LNAS 222
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ + L G++IGKGG I + Q SGAR+ S S P +T+R +M+ G D +
Sbjct: 188 LRLLIPHILIGSIIGKGGMRIREIQDASGARLNASDS--CLPLSTERSLMVVGVADAVHI 245
Query: 97 AVDLVIDKLLTEL 109
A V L+ +L
Sbjct: 246 ATYYVATTLVEQL 258
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 382 GAPLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNS----NERLVTITGT 437
Query: 178 LDEQMRALELILLKLSED 195
+ AL ++ +L +
Sbjct: 438 QECNQMALYMLYSRLESE 455
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 384 PLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NSNERLVTITGTQEC 440
Query: 94 ILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 441 NQMALYMLYSRLESEKH 457
>gi|47229298|emb|CAG04050.1| unnamed protein product [Tetraodon nigroviridis]
Length = 455
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++IGK G ++ + +SGARI +S + +RII ++G I +A ++I+KL
Sbjct: 53 GSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTSIFKAFSMIIEKLE 107
Query: 107 TELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
++ +K +RL+VP S CGS+IGK G IK + S
Sbjct: 108 EDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCKIKEIREVS 154
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
GSIIGK G ++K ++S A I IS + +R++TL G +A +I+ KL
Sbjct: 53 GSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTTSIFKAFSMIIEKLE 107
Query: 194 EDTLYSQT 201
ED S T
Sbjct: 108 EDISTSMT 115
>gi|6753518|ref|NP_034081.1| insulin-like growth factor 2 mRNA-binding protein 1 [Mus musculus]
gi|81908461|sp|O88477.1|IF2B1_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1
gi|3273749|gb|AAC72743.1| coding region determinant binding protein [Mus musculus]
gi|12851514|dbj|BAB29071.1| unnamed protein product [Mus musculus]
gi|148684057|gb|EDL16004.1| insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVVITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|449266969|gb|EMC77947.1| Insulin-like growth factor 2 mRNA-binding protein 2, partial
[Columba livia]
Length = 522
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 28/236 (11%)
Query: 7 SYVPSPDV-------------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKG 53
SY+P +V H R SS P + +R LV GA+IGK
Sbjct: 74 SYIPDEEVSSSPPPQRSRRGGHSSRERGSSPGGSSQPKQLEFPLRMLVPTQFVGAIIGKE 133
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G TI + Q+ +++ + R G ++ I I T + A +++D + E
Sbjct: 134 GLTIKNLTKQTQSKVDIHRKENA--GAAEKPITIHATPEGCSEACRMILDIMQKEADETK 191
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
A+++ L+++ NS G +IGK G +K D+ I IS L +R +T
Sbjct: 192 SAEEI----PLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERTIT 247
Query: 174 LTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMP 220
+ G+ + +A I+ KL E + Q +P G+F +G +P
Sbjct: 248 VKGSTEACSKAQVEIMKKLREAYENDVVAVNQQANLIPGLNLNALGIFSTGLSMLP 303
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G I +GA I+++ + P ++R+++I+G + +
Sbjct: 351 VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAE--GPDASERMVIITGPPEAQFK 408
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + K + + VP+ + G +IGK G T+ + + A +
Sbjct: 409 AQGRIFGKLKEENFFNPKEE---VKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVI 465
Query: 157 ISR 159
+ R
Sbjct: 466 VPR 468
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK G IK + A IKI+ + ++R+V +TG + Q +
Sbjct: 351 VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGP--DASERMVIITGPPEAQFK 408
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 409 AQGRIFGKLKEENFFN 424
>gi|26336871|dbj|BAC32119.1| unnamed protein product [Mus musculus]
Length = 577
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP K P + P +R LV GA+IGK G+TI + Q+ ++I + R G
Sbjct: 187 APAKQ---QPVDIP--LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGA 239
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
++ I + T + A ++++ + E AD+V L+++ N+ G +IGK
Sbjct: 240 AEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKE 295
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
G +K D++ I IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P + ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQ--GMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVVITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|302564995|ref|NP_001180850.1| insulin-like growth factor 2 mRNA-binding protein 1 [Macaca
mulatta]
Length = 577
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|403279506|ref|XP_003931289.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Saimiri boliviensis boliviensis]
Length = 577
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|119193374|ref|XP_001247293.1| hypothetical protein CIMG_01064 [Coccidioides immitis RS]
gi|303312121|ref|XP_003066072.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105734|gb|EER23927.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320040053|gb|EFW21987.1| KH domain RNA binding protein [Coccidioides posadasii str.
Silveira]
gi|392863461|gb|EAS35786.2| KH domain RNA binding protein [Coccidioides immitis RS]
Length = 489
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 5 ESSYVPSPDVHGKRST--APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQS 62
E+ + S H R+T AP +S + +IR ++S+ A IGKGG ++ +
Sbjct: 101 ETQPIQSTASHNDRATSQAPGQSHGTQDETGFIHIRAVISSAEAATCIGKGGENVSQIRR 160
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT 122
SGA+ +S ++ G +RI+ +SG D + +A L+I L E D +KT
Sbjct: 161 LSGAKCTVS---DYTRGAVERILTVSGPQDAVAKAFGLIIRTLNNE--PLDSPSTAQSKT 215
Query: 123 -KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
LRL++P+ GSIIGK+G I+ + S A + S
Sbjct: 216 YPLRLLIPHILIGSIIGKSGVRIREIQEHSGARLNAS 252
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 418 QIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNS----NERLVTITGTQECNQM 473
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 474 ALYMLYSRLESE 485
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P + P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 197 IRTLNNEPLDSPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEHSGARLNASDS-- 254
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 255 CLPLSTERSLVILGVADAVHIATYYVAATLVEQL 288
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS 71
P HG P + + + P + + N + GA+IGKGG+ IN+ + SG+ I+++
Sbjct: 396 PHSHG----TPAQPMGAPVAGGPLTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKIN 451
Query: 72 RSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+ + +R++ I+GT + A+ ++ +L +E H
Sbjct: 452 EPQD---NSNERLVTITGTQECNQMALYMLYSRLESEKH 487
>gi|56237027|ref|NP_006537.3| insulin-like growth factor 2 mRNA-binding protein 1 isoform 1 [Homo
sapiens]
gi|296202548|ref|XP_002748506.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Callithrix jacchus]
gi|297715965|ref|XP_002834307.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pongo abelii]
gi|332259442|ref|XP_003278798.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Nomascus leucogenys]
gi|354483617|ref|XP_003503989.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cricetulus griseus]
gi|402899533|ref|XP_003912749.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Papio anubis]
gi|296434536|sp|Q9NZI8.2|IF2B1_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1; AltName:
Full=Zip code-binding protein 1; Short=ZBP-1;
Short=Zipcode-binding protein 1
gi|4191608|gb|AAD09826.1| IGF-II mRNA-binding protein 1 [Homo sapiens]
gi|157170258|gb|AAI52771.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|162318726|gb|AAI56958.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|168275834|dbj|BAG10637.1| insulin-like growth factor 2 mRNA-binding protein 1 [synthetic
construct]
gi|189053788|dbj|BAG36040.1| unnamed protein product [Homo sapiens]
gi|355568496|gb|EHH24777.1| hypothetical protein EGK_08493 [Macaca mulatta]
Length = 577
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|426347646|ref|XP_004041460.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Gorilla gorilla gorilla]
Length = 525
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 146 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 203
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 204 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 259
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 260 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 297
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP S P ++ ++ + GA+IGK G I + A I+++ P +
Sbjct: 342 APYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPDS 397
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 398 KVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGKG 454
Query: 141 GATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 455 GKTVNELQNLTAAEVVVPR 473
>gi|126138010|ref|XP_001385528.1| hypothetical protein PICST_62156 [Scheffersomyces stipitis CBS
6054]
gi|126092806|gb|ABN67499.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 343
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS +G +IG+ G I+ ++++ + +SR PG+ +RI+ +SGT+D+ +A
Sbjct: 70 RVLVSAKESGCLIGQNGQVIDSIRAETNTKAGISR---LQPGSHERILTVSGTLDDCAKA 126
Query: 98 VDLVIDKL------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
+ L L +L + + T LRL++PNS G++IG G I+
Sbjct: 127 LSYFAQALCNSTIETYNFFPLKQLSSNPCIEH--QTTILRLLIPNSQMGTLIGSKGLRIQ 184
Query: 146 SFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
Q IS + + G N+RLV L G++++ AL +I L ED +S +
Sbjct: 185 QI----QNKYNISMIASKSFLPGSNERLVELQGSVNDLYDALRIISRCLIED--FSSIVG 238
Query: 204 VPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN 242
Y G Y P A P TA+ PN
Sbjct: 239 TNYYIP-------RGHHYNNSSSPRGANPITTASISFPN 270
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 23/192 (11%)
Query: 22 PVKSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P+K LSS+P + T +R L+ N G +IG G I Q++ I + S F PG
Sbjct: 146 PLKQLSSNPCIEHQTTILRLLIPNSQMGTLIGSKGLRIQQIQNK--YNISMIASKSFLPG 203
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTEL--------------HAEDQADDVGTK--TK 123
+ +R++ + G+++++ A+ ++ L+ + H + + G T
Sbjct: 204 SNERLVELQGSVNDLYDALRIISRCLIEDFSSIVGTNYYIPRGHHYNNSSSPRGANPITT 263
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ PN G++IGK G+ I+ S A I IS G +R+ TL+G+ +
Sbjct: 264 ASISFPNDIVGALIGKNGSRIQGVRKISGATIGIS---EEVEGKPERIFTLSGSAHAVEK 320
Query: 184 ALELILLKLSED 195
A EL+ L +
Sbjct: 321 AKELLYHNLERE 332
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 43 NPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVI 102
N + GA+IGK GS I + SGA I +S E G +RI +SG+ + +A +L+
Sbjct: 270 NDIVGALIGKNGSRIQGVRKISGATIGIS---EEVEGKPERIFTLSGSAHAVEKAKELLY 326
Query: 103 DKLLTELHAEDQADD 117
L E +A++
Sbjct: 327 HNLEREEQRRSEAEE 341
>gi|114666310|ref|XP_511944.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Pan troglodytes]
gi|397477448|ref|XP_003810082.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pan paniscus]
Length = 577
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|28212254|ref|NP_783184.1| insulin-like growth factor 2 mRNA-binding protein 1 [Rattus
norvegicus]
gi|81866340|sp|Q8CGX0.1|IF2B1_RAT RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=B-actin zipcode-binding protein 1; Short=rZBP-1;
AltName: Full=IGF-II mRNA-binding protein 1; AltName:
Full=VICKZ family member 1
gi|27464838|gb|AAO16210.1| b-actin zipcode binding protein 1 [Rattus norvegicus]
gi|149053959|gb|EDM05776.1| insulin-like growth factor 2, binding protein 1 [Rattus norvegicus]
gi|171846741|gb|AAI61831.1| Insulin-like growth factor 2 mRNA binding protein 1 [Rattus
norvegicus]
Length = 577
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYGSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVVITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|383858339|ref|XP_003704659.1| PREDICTED: far upstream element-binding protein 1-like [Megachile
rotundata]
Length = 736
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 48/225 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDE 93
+ LV G VIGKGG I Q+++GAR+Q + E PG DR ++SG +++
Sbjct: 303 VEVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPG--DRKCILSGKHQAVEQ 360
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLR---------------------------- 125
+ + + +ID + + +D +GT++ R
Sbjct: 361 VRQRIQELIDSV---MRRDDGRSPMGTRSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKI 417
Query: 126 ---LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
VP+S CG IIGK G TIK + A ++ R + S N+++ + G ++
Sbjct: 418 ETTFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNE--NEKIFIIRGNPEQVE 475
Query: 183 RALELILLKLS---EDTLYSQTMTV----PYTYAGVFFSGFHGMP 220
A + KL +T +S T P AG + + P
Sbjct: 476 HAKRIFSEKLGMAPANTSFSGTQGAIGYNPTWNAGTAYQAWPSQP 520
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 32/182 (17%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR---IQLSRSHEFFPGTTDRIIMISGT 90
P ++ ++ P G +IGKGG TI Q +SGA+ IQ S E ++ + I+G
Sbjct: 197 PGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQE-----QEKPLRITGD 251
Query: 91 IDEILRA----VDLVIDKLLTELHAEDQADD--------------VGTKTKLRLIVPNSS 132
++ A +L+ +K + H + +D GT + ++VP ++
Sbjct: 252 PQKVEYAKQLVYELIAEKEMQMFHRGARGNDRSGSYSNDSSFNHGSGTTDGVEVLVPRAA 311
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
G +IGK G IK ++ A ++ + G DR L+G + +A+E + ++
Sbjct: 312 VGVVIGKGGDMIKKIQAETGARVQFQQGRED--GPGDRKCILSG----KHQAVEQVRQRI 365
Query: 193 SE 194
E
Sbjct: 366 QE 367
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 13/124 (10%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + + G +IG+GG I QS++G +IQ++ G +R+ ++G+ + + RA +L
Sbjct: 112 VPDKMVGLIIGRGGEQITRLQSETGCKIQMAPES----GLPERVCTLTGSREAVNRAKEL 167
Query: 101 VIDKLLTELHAEDQADDVGTKTK---------LRLIVPNSSCGSIIGKAGATIKSFMDDS 151
V+ + E D + + + +++P G IIGK G TIK + S
Sbjct: 168 VLSIVNQRSRTEGIGDMNMSGSSGGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQLQEKS 227
Query: 152 QAVI 155
A +
Sbjct: 228 GAKM 231
>gi|407917412|gb|EKG10721.1| K-like protein [Macrophomina phaseolina MS6]
Length = 488
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 10/126 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+ A VIGKGG + + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 133 HVRAIISSAEAATVIGKGGENVTQIRRMSGAKCTVS---DYSRGAVERILTVSGLVDAVA 189
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTK---LRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
+A L+I L+ ED ++K LRL++P+ GSIIGK+G I+ + S
Sbjct: 190 KAFGLIIRT----LNNEDLNSPSTPQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASG 245
Query: 153 AVIKIS 158
A + S
Sbjct: 246 ARLNAS 251
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 411 GQPMTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNS----NERLVTITGT 466
Query: 178 LDEQMRALELILLKLSED 195
+ AL ++ +L +
Sbjct: 467 QECNQMALYMLYSRLESE 484
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 412 QPMTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NSNERLVTITGTQE 468
Query: 93 EILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 469 CNQMALYMLYSRLESEKH 486
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
S P K +R L+ + L G++IGK G I + Q SGAR+ S S P +T+R +++
Sbjct: 208 STPQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDS--CLPLSTERSLVV 265
Query: 88 SGTIDEILRAVDLVIDKLLTEL 109
G D + A V L+ +L
Sbjct: 266 LGVADAVHIATYYVGSTLVEQL 287
>gi|149723930|ref|XP_001502310.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Equus caballus]
Length = 577
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|395826635|ref|XP_003786522.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Otolemur garnettii]
Length = 577
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|73966275|ref|XP_548184.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Canis lupus familiaris]
gi|301762950|ref|XP_002916873.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Ailuropoda melanoleuca]
gi|410980809|ref|XP_003996768.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Felis catus]
gi|281344391|gb|EFB19975.1| hypothetical protein PANDA_005026 [Ailuropoda melanoleuca]
Length = 577
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|443924046|gb|ELU43123.1| cytoplasmic protein [Rhizoctonia solani AG-1 IA]
Length = 386
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 4 NESSYVPSPDVHG-KRSTAPVKSLSSD--PTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
N +S P+ D + R +P + + P +R LV+ AG +IGKGG + D
Sbjct: 8 NSASPTPAEDQNNHSRPGSPADGTAQNNGPDSDTLTLRALVTTKEAGVIIGKGGKNVADL 67
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR-------------AVDLVIDKLL- 106
+ Q+G + +S+ G +R++ +SGT++++ + A L+I +LL
Sbjct: 68 REQTGVKAGVSK---VVQGVNERVLSVSGTVEDVAKARYSLHRPAILHFAYTLIITQLLQ 124
Query: 107 --TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDH 162
T T LRL++ ++ G+IIG+ G IK+ D+S A + S+ L
Sbjct: 125 SAPSSPGAPPPPPSSTHTSLRLLISHNLMGTIIGRGGLKIKAIQDNSGARMVASKEMLPQ 184
Query: 163 SYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
S +R+V + G+ + RA+ I L ED
Sbjct: 185 S----TERVVEVQGSSESIGRAIAEIGRCLLED 213
>gi|426237799|ref|XP_004012845.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Ovis aries]
Length = 576
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ + GA+IGK G I + A I+++ P + R+++I+G + +
Sbjct: 407 VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPDSKVRMVIITGPPEAQFK 464
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + ++V +T +R VP S+ G +IGK G T+ + + A +
Sbjct: 465 AQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGKGGKTVNELQNLTAAEVV 521
Query: 157 ISR 159
+ R
Sbjct: 522 VPR 524
>gi|344285913|ref|XP_003414704.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Loxodonta africana]
Length = 577
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|431890756|gb|ELK01635.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Pteropus
alecto]
Length = 577
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|301771920|ref|XP_002921378.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 2 [Ailuropoda melanoleuca]
Length = 582
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 19/229 (8%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQGSPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-- 195
GK G +K D+ I IS L +R +T+ G ++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYE 352
Query: 196 ----TLYSQTMTVP--YTYAGVFFSGFHGMPYGAVPPP---VPAVPHNT 235
++ Q +P A F GMP PP P PHN+
Sbjct: 353 NDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMTPPYPHNS 401
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 421 GAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKIK 478
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 479 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 534
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 535 NDQVVVKITG 544
>gi|378731796|gb|EHY58255.1| hypothetical protein HMPREF1120_06267 [Exophiala dermatitidis
NIH/UT8656]
Length = 492
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 19/220 (8%)
Query: 28 SDPTEKPT---YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRI 84
S PT+ T +IR ++S+ A IGKGG + + SGA+ +S ++ G +RI
Sbjct: 124 SAPTQDETNWIHIRAVISSAEAATCIGKGGENVTQIRKLSGAKCTVS---DYSRGAVERI 180
Query: 85 IMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGAT 143
+ +SG+ + + +A L+I L E D +KT LRL++P+ GSIIGK+G
Sbjct: 181 LTVSGSQEAVSKAFGLIIRTLNNE--PLDAPSTAQSKTYPLRLLIPHILIGSIIGKSGVR 238
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
I+ + S A + S D +R + + G D A + + L E ++
Sbjct: 239 IREIQEASGARLNAS--DSCLPLSTERSLVVLGVADAVHIATYYVAVTLVEQ--LTERFG 294
Query: 204 VPYTYAGVFFSGFHGMPYGAVPPP---VPAVPHNTAAHYG 240
P A ++ G P G +P VP VP YG
Sbjct: 295 GP---AASAYATRSGGPAGVIPGGMQVVPYVPQPAGGQYG 331
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 421 QIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNS----NERLVTITGTQECNQM 476
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 477 ALYMLYSRLESE 488
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P + P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 198 IRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDS-- 255
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R +++ G D + A V L+ +L
Sbjct: 256 CLPLSTERSLVVLGVADAVHIATYYVAVTLVEQL 289
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 416 QPITQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQD---NSNERLVTITGTQE 472
Query: 93 EILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 473 CNQMALYMLYSRLESEKH 490
>gi|452004384|gb|EMD96840.1| hypothetical protein COCHEDRAFT_1220374 [Cochliobolus
heterostrophus C5]
Length = 489
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR + A +IGKGG + + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 130 HIRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRGAVERILTVSGQVDAVS 186
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L++ + L + E + +RL++P+ GSIIGKAG I+ + S A
Sbjct: 187 KAFGLIV-RTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNA-- 243
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTVPYTY 208
K++ D +R + + G D A+ + L E SQ T
Sbjct: 244 KLNASDTLLPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 303
Query: 209 AGVFFSGFHGMPYGAVPPPV 228
A V G PY VP P
Sbjct: 304 ANVVPGGMSVQPY--VPQPA 321
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 418 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNS----NERLVTITGTQECNQM 473
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 474 ALYMLYSRLESE 485
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APV S+ P + + + N + GA+IGKGG+ IN+ + SG+ I++ +E +
Sbjct: 405 APVGSIPGQPLTQ----QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPTDNS 457
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+R++ I+GT + A+ ++ +L +E H
Sbjct: 458 NERLVTITGTQECNQMALYMLYSRLESEKH 487
>gi|440910511|gb|ELR60305.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Bos grunniens
mutus]
Length = 577
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|335297826|ref|XP_003358128.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Sus scrofa]
Length = 577
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|354490712|ref|XP_003507500.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cricetulus griseus]
Length = 731
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 333 RQASPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENT- 389
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + + L+++ N+ G +I
Sbjct: 390 -GAAEKPITILSTPE----GASAACKSILEIMHKEAQDTKLTEEVPLKILAHNNFVGRLI 444
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
GK G +K D+ I IS L +R +T+ G ++ RA E I+ K+ E
Sbjct: 445 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCARAEEEIMKKIRE 501
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 570 GAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKIK 627
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 628 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 683
Query: 167 LNDRLVTLTG 176
N +V +TG
Sbjct: 684 NNQVVVKITG 693
>gi|300794399|ref|NP_001179383.1| insulin-like growth factor 2 mRNA-binding protein 1 [Bos taurus]
gi|296476533|tpg|DAA18648.1| TPA: insulin-like growth factor 2 mRNA binding protein 1-like [Bos
taurus]
Length = 577
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|339236169|ref|XP_003379639.1| putative KH domain protein [Trichinella spiralis]
gi|316977680|gb|EFV60751.1| putative KH domain protein [Trichinella spiralis]
Length = 614
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVID--- 103
G++IG+GG TI S+SGARIQ + +R +ISGT+++I RA ++ D
Sbjct: 301 GSIIGRGGETIRRLTSESGARIQFKIGEDH--NAPERTAVISGTMEQIDRATRMITDLVN 358
Query: 104 ---KLLTELHAEDQADDVGTKTKLRLI-VPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
+L E A D + G + + + VP + G +IGK G TIK DS A +++SR
Sbjct: 359 KSASVLLEESAYDCCNFEGCDSDIFYMHVPANKTGLVIGKGGETIKQINMDSGARVELSR 418
Query: 160 LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
+ +++ + GT + A LI +K+ +
Sbjct: 419 --ETAPNDWEKVFVIRGTPYQINHATHLIRIKVGD 451
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 46 AGAVIGKGGSTINDFQSQSGAR-IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
G VIGKGG TI Q ++G + + + S++ P + + I G +++ A L I++
Sbjct: 213 CGLVIGKGGETIKSLQERAGVKMVMIQESNQ--PSGLPKPLRIIGEPNKVEYAKQL-IEE 269
Query: 105 LLTELHAEDQADDVGTKTKL--RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS-RLD 161
++ H ++ + +K +IVP + GSIIG+ G TI+ +S A I+ D
Sbjct: 270 IMNSKHDMNEYGSLTDASKKIGEVIVPKHAVGSIIGRGGETIRRLTSESGARIQFKIGED 329
Query: 162 HSYYGLNDRLVTLTGTLDEQMRALELI 188
H+ +R ++GT+++ RA +I
Sbjct: 330 HN---APERTAVISGTMEQIDRATRMI 353
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 25/146 (17%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF-FPGTTDRIIMISG---TIDEILR 96
V + G +IG+GG +IN QS+SG R+Q+S++ F G R ++G ++++ +
Sbjct: 98 VPDSCVGLIIGRGGESINQIQSESGCRVQMSQTPPFDVNGKPMRGCTLTGPSSSVEKAKQ 157
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK-------------------TKLRLIVPNSSCGSII 137
+ ++ K + G+ + +P + CG +I
Sbjct: 158 MISSIVTKAGETMSLSRGQPVYGSNGPSVLYSSSGSGAAGSDKTITTEMFIPGTKCGLVI 217
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHS 163
GK G TIKS + +A +K+ + S
Sbjct: 218 GKGGETIKSLQE--RAGVKMVMIQES 241
>gi|322708646|gb|EFZ00223.1| hypothetical protein MAA_04000 [Metarhizium anisopliae ARSEF 23]
Length = 456
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+P A +IGKGG +++ + S A+ +S ++ G +RI+ +SG
Sbjct: 109 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVS---DYQKGAVERILTVSGI----- 160
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A L+I L E E A +KT LRL++P+ GSIIGK GA I+ + S A
Sbjct: 161 -AFGLIIRTLNNEPLGE--ASTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGAR 217
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
+ S D ++R + + G D A+ + + TL Q A ++
Sbjct: 218 LNAS--DSCLPMSSERSLVVMGVAD----AVHIATYYVG-STLLEQLNERFGGPAASAYA 270
Query: 215 GFHGMPYGAVPPP---VPAVPHNTAAHYG 240
G P G++P VP P + HYG
Sbjct: 271 TRSGAPAGSIPGGMQVVPYSPQPASGHYG 299
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 35 TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
TY +R L+ + L G++IGKGG+ I + Q SGAR+ S S P +++R +++ G D
Sbjct: 184 TYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDS--CLPMSSERSLVVMGVADA 241
Query: 94 ILRAVDLVIDKLLTELH 110
+ A V LL +L+
Sbjct: 242 VHIATYYVGSTLLEQLN 258
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK G I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 385 QIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS----NERLVTITGTEECNRM 440
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 441 ALYMLYSRLESE 452
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P + + N + GA+IGKGG IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 381 PLTQQIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQD---NSNERLVTITGTEEC 437
Query: 94 ILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 438 NRMALYMLYSRLESEKH 454
>gi|357496471|ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 553
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ T R+L G++IG+GG + + ++ A+I++ E PG +R++ + +
Sbjct: 43 NKEDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIG---ETVPGCDERVVTVYSS 99
Query: 91 IDEILRAVD-------------LVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
DE D + D+++ E DQ ++ G + +L+VP+ G ++
Sbjct: 100 SDETNTVDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVL 159
Query: 138 GKAGATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
GK G +++ ++ A I+I + DH + +D LV ++G +AL I +L +
Sbjct: 160 GKGGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHN 219
Query: 196 TLYSQTM---TVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
+Q + VP Y SG M A PP V P
Sbjct: 220 PSRTQHLLGSAVPSVYP----SGGSLMGPTAGPPIVGMAP 255
>gi|119615102|gb|EAW94696.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_b
[Homo sapiens]
Length = 463
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 8/159 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 84 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 141
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 142 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 197
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L D + Y +R +T+ G ++ RA + I+ K+ E
Sbjct: 198 ISSLQDLTLYN-PERTITVKGAIENCCRAEQEIMKKVRE 235
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 279 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 334
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 335 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 391
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 392 GGKTVNELQNLTAAEVVVPR 411
>gi|452989355|gb|EME89110.1| hypothetical protein MYCFIDRAFT_71441 [Pseudocercospora fijiensis
CIRAD86]
Length = 360
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +V++ AG +IGK G + D + ++G R +S+ PG DR++ ++G + I
Sbjct: 43 LRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSK---VVPGVHDRVLTVTGALTGISD 99
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A LV D L+ + VG +RL++ ++ G+IIG+ G IK D S +
Sbjct: 100 AYGLVADSLVKGVPQMGMGGVVGNPNTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVR 159
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVF 212
V + L S +R+V + GT + +A+ I L +D Y V
Sbjct: 160 MVAQKEMLPQS----TERIVEVQGTPEGVQKAVWEIGKCLIDDEQRG--------YGTVL 207
Query: 213 FSGFHGMPYGAVPPPVPAVPHNTAAHYG 240
+S + GA PP+ + T A YG
Sbjct: 208 YSPAVRVQGGAPAPPL----NGTGASYG 231
>gi|426389287|ref|XP_004061055.1| PREDICTED: RNA-binding protein Nova-1-like [Gorilla gorilla
gorilla]
Length = 416
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 68 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 126
Query: 96 RAVDLVIDKLLTEL 109
AV I + + E+
Sbjct: 127 NAVHSFIAEKVREI 140
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 333 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 386
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 319 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 377
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 378 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 405
>gi|119615099|gb|EAW94693.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615100|gb|EAW94694.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615101|gb|EAW94695.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
Length = 441
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 62 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 119
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 120 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 175
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 176 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 213
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 257 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 312
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 313 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 369
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 370 GGKTVNELQNLTAAEVVVPR 389
>gi|350412234|ref|XP_003489579.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
impatiens]
Length = 736
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 48/225 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDE 93
+ LV G VIGKGG I Q+++GAR+Q + E PG DR ++SG +++
Sbjct: 304 VEVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPG--DRKCIVSGKHQAVEQ 361
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLR---------------------------- 125
+ + + +ID + + +D ++G ++ R
Sbjct: 362 VRQRIQELIDSV---MRRDDGRSNIGARSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKI 418
Query: 126 ---LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
VP+S CG IIGK G TIK + A ++ R + S N+++ + G ++
Sbjct: 419 ETMFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNE--NEKIFIIRGNPEQVE 476
Query: 183 RALELILLKLS---EDTLYSQTMTV----PYTYAGVFFSGFHGMP 220
A + KL +T ++ T P AG + + P
Sbjct: 477 HAKRIFSEKLGMAPANTSFTGTQGAIGYNPTWNAGTAYQAWPNQP 521
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR---IQLSRSHEFFPGTTDRIIMISGTID 92
++ ++ P G +IGKGG TI Q +SGA+ IQ S E ++ + I+G
Sbjct: 200 FVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQE-----QEKPLRITGDPQ 254
Query: 93 EILRA----VDLVIDKLLTELHAEDQADD--------------VGTKTKLRLIVPNSSCG 134
++ A +L+ +K + H + +D GT + ++VP ++ G
Sbjct: 255 KVEYAKQLVYELIAEKEMQMFHRGARGNDRSGNYSNDSSFNHGSGTTDGVEVLVPRAAVG 314
Query: 135 SIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
+IGK G IK ++ A ++ + G DR ++G + +A+E + ++ E
Sbjct: 315 VVIGKGGDMIKKIQAETGARVQFQQGRED--GPGDRKCIVSG----KHQAVEQVRQRIQE 368
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + + G +IG+GG I QS++G +IQ++ P +R+ ++G+ + + RA +L
Sbjct: 114 VPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLP---ERLCTLTGSREAVNRAKEL 170
Query: 101 VIDKLLTELHAEDQADDVGTKTKL-------RLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
V+ + E D G+ + +++P G IIGK G TIK + S A
Sbjct: 171 VLSIVNQRSRTEGIGDMGGSSGGIMSHSGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGA 230
Query: 154 VI 155
+
Sbjct: 231 KM 232
>gi|449303999|gb|EMD00007.1| hypothetical protein BAUCODRAFT_359485 [Baudoinia compniacensis
UAMH 10762]
Length = 471
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R ++S+ A IGKGG ++ + +GA+ +S E+ G +RI+ +SG +D +
Sbjct: 147 HMRAIISSAEAATTIGKGGENVSQIRRLAGAKCTVS---EYTRGAVERILTVSGHVDAVA 203
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L+I + L + E+ + LRL++P+ GSIIGK G I+ + S A +
Sbjct: 204 KAFGLII-RTLNQEPLEEPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARL 262
Query: 156 KIS 158
S
Sbjct: 263 NAS 265
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G ++ +PN G+IIGK GA I S +VIKI+ + N+RLVT+TGT
Sbjct: 388 GQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNN---NERLVTITGTQ 444
Query: 179 DEQMRALELILLKLSEDTLYSQTM 202
+ AL ++ +L E + S +
Sbjct: 445 ECNQMALYMLYSRLGESSKNSNAV 468
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+ +P E+P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 210 IRTLNQEPLEEPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASES-- 267
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R +++ G D + A V L+ +L
Sbjct: 268 CLPLSTERSLVVLGVADAVHIATYYVGSTLVEQL 301
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + +R++ I+GT +
Sbjct: 389 QPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NNNERLVTITGTQE 445
Query: 93 EILRAVDLVIDKL 105
A+ ++ +L
Sbjct: 446 CNQMALYMLYSRL 458
>gi|340728851|ref|XP_003402727.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
terrestris]
Length = 738
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 48/225 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDE 93
+ LV G VIGKGG I Q+++GAR+Q + E PG DR ++SG +++
Sbjct: 304 VEVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPG--DRKCIVSGKHQAVEQ 361
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLR---------------------------- 125
+ + + +ID + + +D ++G ++ R
Sbjct: 362 VRQRIQELIDSV---MRRDDGRSNIGARSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKI 418
Query: 126 ---LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
VP+S CG IIGK G TIK + A ++ R + S N+++ + G ++
Sbjct: 419 ETMFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNE--NEKIFIIRGNPEQVE 476
Query: 183 RALELILLKLS---EDTLYSQTMTV----PYTYAGVFFSGFHGMP 220
A + KL +T ++ T P AG + + P
Sbjct: 477 HAKRIFSEKLGMAPANTSFTGTQGAIGYNPTWNAGTAYQAWPNQP 521
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + + G +IG+GG I QS++G +IQ++ P +R+ ++G+ + + RA +L
Sbjct: 114 VPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLP---ERLCTLTGSREAVNRAKEL 170
Query: 101 VIDKLLTELHAEDQADDVGTKTKL-------RLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
V+ + E D G+ L +++P G IIGK G TIK + S A
Sbjct: 171 VLSIVNQRSRTEGIGDMGGSSGGLMSHSGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGA 230
Query: 154 VI 155
+
Sbjct: 231 KM 232
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR---IQLSRSHEFFPGTTDRIIMISGTID 92
++ ++ P G +IGKGG TI Q +SGA+ IQ S E ++ + I+G
Sbjct: 200 FVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQE-----QEKPLRITGDPQ 254
Query: 93 EILRA----VDLVIDKLLTELHAEDQADD--------------VGTKTKLRLIVPNSSCG 134
++ A +L+ +K + H + +D GT + ++VP ++ G
Sbjct: 255 KVEYAKQLVYELIAEKEMQMFHRGARGNDRSGNYSNDSSFNHGSGTTDGVEVLVPRAAVG 314
Query: 135 SIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
+IGK G IK ++ A ++ + G DR ++G + +A+E + ++ E
Sbjct: 315 VVIGKGGDMIKKIQAETGARVQFQQGRED--GPGDRKCIVSG----KHQAVEQVRQRIQE 368
>gi|391325297|ref|XP_003737175.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Metaseiulus occidentalis]
Length = 323
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 92/190 (48%), Gaps = 13/190 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+RFL+ + AGA+IGK G I + +S ++ + G +R++++ D + +
Sbjct: 37 LRFLIPSQRAGAIIGKSGKQIVELRSTFNCKLVVPDCE----GVPERLMLVRVNKDLLPQ 92
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+ V+ K+ A + A + + +++L++ ++IGK GA IK + +QA IK
Sbjct: 93 LISSVVQKIT----ANEDATNGKNRAEMKLLLHQKEAVALIGKGGARIKDIREKTQAAIK 148
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGF 216
I D + +D++V +TG+ D A+ + L + + ++ YTY + +
Sbjct: 149 I--FDKTCPLSSDKVVRITGSADVVTEAIRTVCEALENEDV---QISDHYTYDPANYEPY 203
Query: 217 HGMPYGAVPP 226
+G + P
Sbjct: 204 TAYEWGGMDP 213
>gi|357496469|ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 569
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
++ T R+L G++IG+GG + + ++ A+I++ E PG +R++ + +
Sbjct: 43 NKEDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIG---ETVPGCDERVVTVYSS 99
Query: 91 IDEILRAVD-------------LVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
DE D + D+++ E DQ ++ G + +L+VP+ G ++
Sbjct: 100 SDETNTVDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVL 159
Query: 138 GKAGATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
GK G +++ ++ A I+I + DH + +D LV ++G +AL I +L +
Sbjct: 160 GKGGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHN 219
Query: 196 TLYSQTM---TVPYTYAGVFFSGFHGMPYGAVPPPVPAVP 232
+Q + VP Y SG M A PP V P
Sbjct: 220 PSRTQHLLGSAVPSVYP----SGGSLMGPTAGPPIVGMAP 255
>gi|224012942|ref|XP_002295123.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969085|gb|EED87427.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 728
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 27/150 (18%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ V N + G +IG+GG +I Q +SG R+Q+ + HE PGTT R+I ++ E +
Sbjct: 281 KIGVPNGMVGFIIGRGGESITSMQRRSGCRVQIQKEHEMAPGTTQRVITLTAPNAESIAQ 340
Query: 98 VDLVIDKLLTELHAEDQADDVG-------------TKTKLRLI--------------VPN 130
+I+ ++ E + A +++ L+ VP+
Sbjct: 341 CRAIIESMIVERMQQTGATTAALASSSTALGGGSSASSQMALLQKALNEGQKHITVQVPD 400
Query: 131 SSCGSIIGKAGATIKSFMDDSQAVIKISRL 160
+ G IIGK GA I++ D S A ++I ++
Sbjct: 401 ADVGLIIGKQGAQIRTIQDTSGANVQIPQV 430
>gi|413939546|gb|AFW74097.1| hypothetical protein ZEAMMB73_647534 [Zea mays]
gi|413939547|gb|AFW74098.1| hypothetical protein ZEAMMB73_647534 [Zea mays]
Length = 161
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 182 MRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
M A++LIL KLS D Y ++ P+ YAG+ F + G+P G + +P VP+N A +YGP
Sbjct: 1 MNAIDLILKKLSLDVHYPANLSSPFPYAGLTFPSYPGVPVGYM---IPQVPYNNAVNYGP 57
Query: 242 NMG-GRKFQNNKVLLP 256
N G G ++QNNK P
Sbjct: 58 NNGYGGRYQNNKPSTP 73
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 3 TNESSYVPSPDVHGK----RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTIN 58
N +Y P+ G+ + + P++S +S+ ++ I +++ GAV+G+ G I
Sbjct: 50 NNAVNYGPNNGYGGRYQNNKPSTPMRSPASNEAQESLTIG--IADEHIGAVVGRAGRNIT 107
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+ SGARI++S +F GT+DR + I+GT + I A +++ ++
Sbjct: 108 EIIQASGARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRV 154
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
+ L + + + G+++G+AG I + S A IKIS G +DR VT+TGT +
Sbjct: 83 QESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFISGTSDRKVTITGTSEA 142
Query: 181 QMRALELILLKLSEDT 196
A +I+ ++S +
Sbjct: 143 IRTAESMIMQRVSASS 158
>gi|126308261|ref|XP_001367379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Monodelphis domestica]
Length = 577
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMQKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G+++ +A + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGSIENCCKAEQEIMKKVRE 349
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKAISVHSTPEGCSS 255
Query: 184 ALELILLKLSEDTLYSQT 201
A ++IL + ++ ++T
Sbjct: 256 ACKMILEIMQKEAKDTKT 273
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|395532668|ref|XP_003768391.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Sarcophilus harrisii]
Length = 577
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMQKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G+++ +A + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGSIENCCKAEQEIMKKVRE 349
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKAISVHSTPEGCSS 255
Query: 184 ALELILLKLSEDTLYSQT 201
A ++IL + ++ ++T
Sbjct: 256 ACKMILEIMQKEAKDTKT 273
>gi|145336377|ref|NP_174629.3| far upstream element-binding protein [Arabidopsis thaliana]
gi|110739541|dbj|BAF01679.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|110739658|dbj|BAF01737.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|110739944|dbj|BAF01877.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|332193492|gb|AEE31613.1| far upstream element-binding protein [Arabidopsis thaliana]
Length = 763
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 31/219 (14%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T R V + G +IGKGG + Q SGA+IQ+ R E P + R + I GT+ I
Sbjct: 232 TTRRIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVSCI 291
Query: 95 LRAVDLVIDKLLTELHAEDQADDV------GTKTKLRLIVPNSSCGSIIGKAGATIKSFM 148
+A +KL+ + AE +A V G ++ + VP+ G IIG+ G TIK+
Sbjct: 292 EKA-----EKLINAVIAEVEAGGVPALAARGVPEQMEIKVPSDKVGVIIGRGGETIKNMQ 346
Query: 149 DDSQAVIKI---SRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
S+A I++ + D S +R V ++G D++ + L+K D +Y P
Sbjct: 347 TKSRARIQLIPQNEGDAS----KERTVRISG--DKRQIDIATALIK---DVMYQDGRPSP 397
Query: 206 YTYAGVFFSGFHGMPYGAVPPPV-----PAVPHNTAAHY 239
Y+ G F + P G PP P PH+ +Y
Sbjct: 398 YS--GGFNQQAY-QPRGPGGPPQWGSRGPHGPHSMPYNY 433
>gi|356536806|ref|XP_003536925.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 561
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 4 NESSYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQ 63
+E P D+ G VK P E R LV G++IG+ G I
Sbjct: 137 SEEKRGPEEDLKGGE----VKKWPGWPGE--NVFRMLVPVQKVGSIIGRKGEFIRKITED 190
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISG----------TIDEILRAVDLVIDKLLTELHAED 113
+ ARI++ + PGT++R +M+S +D +LR V++ + H D
Sbjct: 191 TKARIKIL---DGPPGTSERAVMVSAKEEPDCSIPPAVDGLLRVHKQVVN---VDPHPAD 244
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH-SYYGL-NDRL 171
A RL+V ++ GS+IGK G+TIKSF D + I+I +H + L +D +
Sbjct: 245 SASGAVRPVVTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSI 304
Query: 172 VTLTGTLDEQMRALELILLKL 192
V + G +A+EL+ + L
Sbjct: 305 VEIQGESSGVHKAVELVAIHL 325
>gi|297813443|ref|XP_002874605.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297320442|gb|EFH50864.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 730
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT---IDEILRA 97
V N G +IGKGG TI Q SGA+IQ+ R E P + R + I GT I+ R
Sbjct: 188 VPNSKVGVLIGKGGETIRYLQFNSGAKIQILRDSEADPNSALRPVEIIGTVACIENAERL 247
Query: 98 VDLVIDK--------LLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ VI + L+ H A +G ++ + VPN G IIG+ G TIK
Sbjct: 248 ISAVIAEAEAGGSPALVARGHPSTHA--IGIPEQIEIKVPNDKVGLIIGRGGETIKDMQT 305
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTG 176
S A I++ GL +R V ++G
Sbjct: 306 RSGARIQLIPQHAEGDGLKERTVRISG 332
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P I V N G +IG+GG TI D Q++SGARIQL H G +R + ISG +
Sbjct: 277 PEQIEIKVPNDKVGLIIGRGGETIKDMQTRSGARIQLIPQHAEGDGLKERTVRISGDKMQ 336
Query: 94 ILRAVDLVID 103
I A D++ D
Sbjct: 337 IDIATDMIKD 346
>gi|242764737|ref|XP_002340835.1| KH domain RNA binding protein [Talaromyces stipitatus ATCC 10500]
gi|218724031|gb|EED23448.1| KH domain RNA binding protein [Talaromyces stipitatus ATCC 10500]
Length = 461
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 23/173 (13%)
Query: 3 TNESSYVPSPDVHGKRSTAPVKS-------LSSDPTEKPT--------YIRFLVSNPLAG 47
TN S V D T P++S ++S P + T +IR ++S+ A
Sbjct: 57 TNGDSVVNGKDASSANDTQPIQSTASHADRVTSQPPQHQTPQDESSWIHIRAVISSQEAA 116
Query: 48 AVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLT 107
IGKGG ++ + SG++ +S ++ G +RI+ +SG D + +A L+I L
Sbjct: 117 TCIGKGGENVSKIRQLSGSKCTVS---DYSRGAVERILTVSGPQDAVAKAFGLIIRTLNN 173
Query: 108 E-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
E L A A +KT LRL++P+ GSIIGK G I+ + S A + S
Sbjct: 174 EPLEAPSTAQ---SKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGARLNAS 223
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGKGG I + Q SGAR L+ S
Sbjct: 168 IRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGAR--LNASDA 225
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R +++ G D + A V L+ +L
Sbjct: 226 CLPLSTERSLVVLGVADAVHIATYYVAVTLVEQL 259
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 15 HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSH 74
H + A + L+ + +P + + N + GA+IGKGG+ IN+ + SG+ I+++
Sbjct: 367 HAQPHGAGAQPLAGVVSSQPITQQIYIPNDMVGAIIGKGGTKINEIRHLSGSVIKINEPQ 426
Query: 75 EFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
E + +R++ I+GT + A+ ++ +L +E H
Sbjct: 427 E---NSNERLVTITGTQECNQMALYMLYARLESEKH 459
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +PN G+IIGK G I S +VIKI+ + N+RLVT+TGT + A
Sbjct: 390 QIYIPNDMVGAIIGKGGTKINEIRHLSGSVIKINEPQENS---NERLVTITGTQECNQMA 446
Query: 185 LELILLKLSED 195
L ++ +L +
Sbjct: 447 LYMLYARLESE 457
>gi|189194345|ref|XP_001933511.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979075|gb|EDU45701.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 434
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 15/213 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R + A +IGKGG + + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 127 HVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRGAVERILTVSGQVDAVS 183
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L++ + L + E + +RL++P+ GSIIGKAG I+ + S A
Sbjct: 184 KAFGLIV-RTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNA-- 240
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTVPYTY 208
K++ D +R + + G D A+ + L E SQ T
Sbjct: 241 KLNASDTLLPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 300
Query: 209 AGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGP 241
A V G PY VP P A + + GP
Sbjct: 301 ANVVPGGMSVQPY--VPQPAGAGSPSRGPYGGP 331
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 368 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNS----NERLVTITGTQECNQM 423
Query: 184 ALELILLKLSE 194
AL ++ +L +
Sbjct: 424 ALYMLYSRLGQ 434
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+P + + N + GA+IGKGG+ IN+ + SG+ I++ +E + +R++ I+GT
Sbjct: 363 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPTDNSNERLVTITGT 417
>gi|444517721|gb|ELV11739.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Tupaia
chinensis]
Length = 552
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 8/159 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L D + Y +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYN-PERTITVKGAIENCCRAEQEIMKKVRE 349
>gi|363737066|ref|XP_003641794.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Gallus gallus]
Length = 564
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 28/236 (11%)
Query: 7 SYVPSPDV-------------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKG 53
SY+P +V H R SS P + +R LV GA+IGK
Sbjct: 140 SYIPDEEVSSPPPPQRSRRGGHASREQGSSPGGSSQPKQLDFPLRMLVPTQFVGAIIGKE 199
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G TI + Q+ +++ + R G ++ I I T + A +++D + E
Sbjct: 200 GLTIKNLTKQTQSKVDIHRKENA--GAAEKPITIHATPEGCSEACRMILDIMQKEADETK 257
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
A+++ L+++ NS G +IGK G +K D+ I IS L +R +T
Sbjct: 258 SAEEI----PLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERTIT 313
Query: 174 LTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMP 220
+ G+ + A I+ KL E + Q +P + G+F +G +P
Sbjct: 314 VKGSTEACSNAEVEIMKKLREAYENDIVAVNQQANLIPGLNLSALGIFSTGLSMLP 369
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G I +GA I+++ + P T+R+++I+G + +
Sbjct: 394 VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAE--GPDATERMVIITGPPEAQFK 451
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + K + + VP+ + G +IGK G T+ + + A +
Sbjct: 452 AQGRIFGKLKEENFFNPKEE---VKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVI 508
Query: 157 ISR 159
+ R
Sbjct: 509 VPR 511
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 80/207 (38%), Gaps = 47/207 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + +G +I +S + +R I + G+ +
Sbjct: 264 LKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERTITVKGSTEACSN 323
Query: 97 AVDLVIDKLLTELHAED------QAD---------------------------------- 116
A ++ I K L E + D QA+
Sbjct: 324 A-EVEIMKKLREAYENDIVAVNQQANLIPGLNLSALGIFSTGLSMLPSSAGARGAAAAAP 382
Query: 117 ----DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
+ + + L +P + G+IIGK G IK + A IKI+ + +R+V
Sbjct: 383 YHPFALPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGP--DATERMV 440
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYS 199
+TG + Q +A I KL E+ ++
Sbjct: 441 IITGPPEAQFKAQGRIFGKLKEENFFN 467
>gi|15225229|ref|NP_180167.1| upstream element-binding protein [Arabidopsis thaliana]
gi|19310435|gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thaliana]
gi|20197266|gb|AAM15002.1| unknown protein [Arabidopsis thaliana]
gi|20197368|gb|AAM15045.1| unknown protein [Arabidopsis thaliana]
gi|110741998|dbj|BAE98938.1| hypothetical protein [Arabidopsis thaliana]
gi|330252684|gb|AEC07778.1| upstream element-binding protein [Arabidopsis thaliana]
Length = 632
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G +IGKGG TI Q QSGA+IQ++R + P R + ++GT D+I +A L+ D +L
Sbjct: 146 GVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNCATRTVDLTGTPDQISKAEQLITD-VL 204
Query: 107 TELHAEDQADDVGTKT----------KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
E A + A G + + +PN+ G IIGK G TIKS + A I+
Sbjct: 205 QEAEAGNTAGSGGGGGRRMGGQAGADQFVMKIPNNKVGLIIGKGGETIKSMQAKTGARIQ 264
Query: 157 I 157
+
Sbjct: 265 V 265
>gi|344245659|gb|EGW01763.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Cricetulus
griseus]
Length = 552
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 8/159 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L D + Y +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYN-PERTITVKGAIENCCRAEQEIMKKVRE 349
>gi|7141072|gb|AAF37203.1|AF198254_1 mRNA-binding protein CRDBP [Homo sapiens]
Length = 577
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V KT + N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEVPLKT----LAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP S P ++ ++ + GA+IGK G I + A I+++ P +
Sbjct: 394 APYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPDS 449
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 450 KVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGKG 506
Query: 141 GATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 507 GKTVNELQNLTAAEVVVPR 525
>gi|448081084|ref|XP_004194801.1| Piso0_005318 [Millerozyma farinosa CBS 7064]
gi|359376223|emb|CCE86805.1| Piso0_005318 [Millerozyma farinosa CBS 7064]
Length = 492
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
Query: 34 PTYIRFLVSNPL--AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
PTY+ F + P+ A ++GK G IN + ++ RI +S + + P +RII + G
Sbjct: 125 PTYVSFRMYCPVKEASTIVGKKGEKINHIRDKANVRINVSENLKNVP---ERIISVRGPA 181
Query: 92 DEILRAVDLVIDKLLTELHAEDQ-ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+ + +A L+ +L E ED+ A + + L+L+VP+ G IIGK G + D
Sbjct: 182 ENVAKAFGLIARTILEE--PEDEPASILSRQYNLKLLVPHPMVGFIIGKQGVKFREIEDS 239
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
S A +K + Y DR++++TG D
Sbjct: 240 SAAKLKAAEQPLPYS--TDRILSITGVGD 266
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 23 VKSLSSDPTEKPTYI-------RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++ +P ++P I + LV +P+ G +IGK G + + S A+ L + +
Sbjct: 192 ARTILEEPEDEPASILSRQYNLKLLVPHPMVGFIIGKQGVKFREIEDSSAAK--LKAAEQ 249
Query: 76 FFPGTTDRIIMISGTIDEILRAV 98
P +TDRI+ I+G D I A+
Sbjct: 250 PLPYSTDRILSITGVGDAIHIAI 272
>gi|396482778|ref|XP_003841545.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
gi|312218120|emb|CBX98066.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
Length = 488
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R + A +IGKGG + + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 129 HVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRGAVERILTVSGQVDAVS 185
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L++ + L + E + +RL++P+ GSIIGKAG I+ + S A
Sbjct: 186 KAFGLIV-RTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNA-- 242
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTVPYTY 208
K++ D +R + + G D A+ + L E SQ T
Sbjct: 243 KLNASDTLLPNSGERSLVVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 302
Query: 209 AGVFFSGFHGMPYGAVPPPV 228
A V G PY VP P
Sbjct: 303 ANVVPGGMSVQPY--VPQPA 320
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S ++IKI+ D+S N+RLVT+TGT +
Sbjct: 417 QIFIPNDMVGAIIGKGGAKINEIRQLSGSMIKINEPTDNS----NERLVTITGTQECNQM 472
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 473 ALYMLYSRLESE 484
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 8 YVPSPDVHGKRSTAP-VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGA 66
+ +P HG P V S+ P + + + N + GA+IGKGG+ IN+ + SG+
Sbjct: 390 HAAAPVAHGSTPMQPAVGSMPGQPLTQ----QIFIPNDMVGAIIGKGGAKINEIRQLSGS 445
Query: 67 RIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
I++ +E + +R++ I+GT + A+ ++ +L +E H
Sbjct: 446 MIKI---NEPTDNSNERLVTITGTQECNQMALYMLYSRLESEKH 486
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T K +R L+ + L G++IGK G I + Q S A+ L+ S P + +R +++ G
Sbjct: 207 TSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAK--LNASDTLLPNSGERSLVVLGV 264
Query: 91 IDEILRAVDLVIDKLLTEL 109
D + AV V L+ +L
Sbjct: 265 ADAVHIAVYYVAQTLVEQL 283
>gi|302697985|ref|XP_003038671.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
gi|300112368|gb|EFJ03769.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
Length = 308
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGKGG + + + +G + +S+ PG +R++ I+G+ + I +
Sbjct: 3 LRALVSTKDAGVIIGKGGKNVAELREVTGVKAGVSK---VVPGVHERVLTINGSPEGIAK 59
Query: 97 AVDLVIDKLLTELHAEDQADD--VGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A +I +L++ + D V T T +RL+V ++ G+IIG+ G IK+ D S
Sbjct: 60 AYQHIIAQLVSASAGSPELDASVVATNPHTMIRLLVSHNLMGTIIGRGGLKIKAIQDASG 119
Query: 153 A--VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
A V + L S +R+V + G DE RA+ I L ED T TV Y
Sbjct: 120 ARLVAQKDMLPQS----TERVVEVHGVPDEIGRAIYEISKSLLED-WERNTGTVLY 170
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 83/208 (39%), Gaps = 56/208 (26%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T IR LVS+ L G +IG+GG I Q SGAR L + P +T+R++ + G DEI
Sbjct: 89 TMIRLLVSHNLMGTIIGRGGLKIKAIQDASGAR--LVAQKDMLPQSTERVVEVHGVPDEI 146
Query: 95 LRAVDLVIDKLLTELHAEDQADDVGT-------------------------KTKLRLIVP 129
RA+ + LL ED + GT + R I P
Sbjct: 147 GRAIYEISKSLL-----EDWERNTGTVLYHPQAAEASGAAARRPSTNGFSPGARRRAISP 201
Query: 130 NSSCGS----------------------IIGKAGATIKSFMDDSQAVIKISRLDHSYYGL 167
S GS IIG+ G I S + I I++ H G
Sbjct: 202 TPSAGSQSTPNALIRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKAPHDETG- 260
Query: 168 NDRLVTLTGTLDEQMRALELILLKLSED 195
+R+ T+ G+ + +AL L+ +L +
Sbjct: 261 -ERMFTIVGSPEANEKALYLLYNQLESE 287
>gi|326519350|dbj|BAJ96674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 683
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V N G +IGK G TI + Q SGA+IQ+++ + R + + GT++ I +A L
Sbjct: 157 VPNTKVGVLIGKAGETIRNLQMSSGAKIQITKDADVSSDAMTRPVELVGTVESIDKAEQL 216
Query: 101 VIDKLLTELHAEDQ----ADDVGT----KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
I ++ E A A G+ + ++VP++ G IIGK G TIK+ S
Sbjct: 217 -IKSVIAEAEAGGSPALIAKGFGSGQSGSEQFEMLVPDNKVGLIIGKGGETIKNLQTRSG 275
Query: 153 AVIK-ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
A I+ I + + L +R V +TG + A ELI +S+
Sbjct: 276 ARIQLIPQHPPAGTTLTERTVRVTGNKKQIEAAKELIKQAMSQ 318
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT--TDRIIMISGTIDEI 94
LV + G +IGKGG TI + Q++SGARIQL H GT T+R + ++G +I
Sbjct: 247 FEMLVPDNKVGLIIGKGGETIKNLQTRSGARIQLIPQHPPA-GTTLTERTVRVTGNKKQI 305
Query: 95 LRAVDLVIDKL 105
A +L+ +
Sbjct: 306 EAAKELIKQAM 316
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 85 IMISGTID----EILRAVDLVI------DKLLTELHAEDQADDV--GTKTKLRLI-VPNS 131
++ G D E+ A DL + TE + Q D + RLI VPN+
Sbjct: 101 VVTEGAADAQNAEVAPAGDLQTSSEVKPQEAATEAPPQQQEGDATGALQETTRLIDVPNT 160
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
G +IGKAG TI++ S A I+I++ R V L GT++ +A +LI
Sbjct: 161 KVGVLIGKAGETIRNLQMSSGAKIQITKDADVSSDAMTRPVELVGTVESIDKAEQLIKSV 220
Query: 192 LSE 194
++E
Sbjct: 221 IAE 223
>gi|261195190|ref|XP_002623999.1| KH domain RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239587871|gb|EEQ70514.1| KH domain RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239610640|gb|EEQ87627.1| KH domain RNA binding protein [Ajellomyces dermatitidis ER-3]
gi|327348926|gb|EGE77783.1| KH domain RNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 496
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 15/144 (10%)
Query: 24 KSLSSDPTEKPT-------YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
+S S P+++ T +IR ++S+ A IGKGG ++ + SGA+ +S ++
Sbjct: 120 RSSSQPPSQQATQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVS---DY 176
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-LHAEDQADDVGTKT-KLRLIVPNSSCG 134
G +RI+ +SG D + +A L+I L E L A A +KT LRL++P+ G
Sbjct: 177 SRGAVERILTVSGMQDAVAKAFGLIIRTLNNEPLEAPSTAQ---SKTYPLRLLIPHLLIG 233
Query: 135 SIIGKAGATIKSFMDDSQAVIKIS 158
SIIGK+G I+ + S A + S
Sbjct: 234 SIIGKSGVRIREIQEASGARLNAS 257
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 202 IRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDS-- 259
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 260 CLPLSTERTLVILGVADAVHIATYYVAVTLVEQL 293
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 419 GAPVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNS----NERLVTITGT 474
Query: 178 LDEQMRALELILLKLSED 195
+ AL ++ +L +
Sbjct: 475 PECNQMALYMLYSRLESE 492
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 9 VPSP-DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR 67
P P VHG + P + P + + N + GA+IGKGG+ IN+ + SG+
Sbjct: 398 APQPTQVHGAPTAQPAGGVVPG---APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSV 454
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
I+++ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 455 IKINEPQD---NSNERLVTITGTPECNQMALYMLYSRLESEKH 494
>gi|448085571|ref|XP_004195892.1| Piso0_005318 [Millerozyma farinosa CBS 7064]
gi|359377314|emb|CCE85697.1| Piso0_005318 [Millerozyma farinosa CBS 7064]
Length = 492
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
Query: 34 PTYIRFLVSNPL--AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
PTY+ F + P+ A ++GK G IN + ++ RI +S + + P +RII + G
Sbjct: 125 PTYVSFRMYCPVKEASTIVGKKGEKINHIRDKANVRINVSENLKNVP---ERIISVRGPA 181
Query: 92 DEILRAVDLVIDKLLTELHAEDQ-ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+ + +A L+ +L E ED+ A + + L+L+VP+ G IIGK G + D
Sbjct: 182 ENVAKAFGLIARTILEE--PEDEPASILSRQYNLKLLVPHPMVGFIIGKQGVKFREIEDS 239
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
S A +K + Y DR++++TG D
Sbjct: 240 SAAKLKAAEQPLPYS--TDRILSITGVGD 266
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 23 VKSLSSDPTEKPTYI-------RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++ +P ++P I + LV +P+ G +IGK G + + S A+ L + +
Sbjct: 192 ARTILEEPEDEPASILSRQYNLKLLVPHPMVGFIIGKQGVKFREIEDSSAAK--LKAAEQ 249
Query: 76 FFPGTTDRIIMISGTIDEILRAV 98
P +TDRI+ I+G D I A+
Sbjct: 250 PLPYSTDRILSITGVGDAIHIAI 272
>gi|190344879|gb|EDK36648.2| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 7 SYVPSPDV-HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGA--VIGKGGSTINDFQSQ 63
+Y P P H ++ P+ + ++ PTY+ F + P+ A VIGK G IN + +
Sbjct: 171 AYDPVPFANHLDYTSRPMANHQAERESDPTYVSFRMYCPVKEASFVIGKRGDMINHLREK 230
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT- 122
+ ARIQ+S E +RII + G + + +A L+ +L E ED+ + ++
Sbjct: 231 ANARIQVS---ENIKDVQERIISVKGPAENVAKAFGLITRAILEE--PEDEPASIMSRQY 285
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
L++++P+ G IIGK G+ + ++S A +K + + DR++++ G D
Sbjct: 286 NLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLKAA--EQPLPNSTDRVLSVLGVGD 340
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 23 VKSLSSDPTEKPTYI-------RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++ +P ++P I + L+ +P+ G +IGKGGS + + S A+ L + +
Sbjct: 266 TRAILEEPEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAAK--LKAAEQ 323
Query: 76 FFPGTTDRIIMISGTIDEILRAV 98
P +TDR++ + G D I A+
Sbjct: 324 PLPNSTDRVLSVLGVGDAIHIAI 346
>gi|344250764|gb|EGW06868.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 306
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G++I K G ++ + +SGAR +S + +RII ++G + I +A ++IDKL
Sbjct: 7 GSIIAKKGESVKKMREESGARTSISDGN-----CPERIITLAGPTNAIFKAFAMIIDKLE 61
Query: 107 TELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+ + ++ LRL+VP S CGS+IGK G IK + + A ++++
Sbjct: 62 EGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA 115
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T +SN L G +IG+ G+ IN+ + SGA+I+ + E G+TDR + I+
Sbjct: 240 DASAQTTSHELTISNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVE---GSTDRQVTIT 296
Query: 89 GTIDEI 94
G+ I
Sbjct: 297 GSAASI 302
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+ I
Sbjct: 71 STAASRPPVALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTEWAIT 128
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G ++ V + +L L
Sbjct: 129 IAGIPQSLIECVKQICVVMLETL 151
>gi|297467989|ref|XP_001257255.3| PREDICTED: RNA-binding protein Nova-1-like [Bos taurus]
gi|311260932|ref|XP_001924448.2| PREDICTED: RNA-binding protein Nova-1-like [Sus scrofa]
gi|338717979|ref|XP_001488883.3| PREDICTED: RNA-binding protein Nova-1-like [Equus caballus]
gi|397475481|ref|XP_003809167.1| PREDICTED: RNA-binding protein Nova-1-like isoform 3 [Pan paniscus]
gi|426248344|ref|XP_004017923.1| PREDICTED: RNA-binding protein Nova-1 [Ovis aries]
gi|149051187|gb|EDM03360.1| neuro-oncological ventral antigen 1, isoform CRA_a [Rattus
norvegicus]
gi|431917816|gb|ELK17050.1| RNA-binding protein Nova-1 [Pteropus alecto]
Length = 385
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G ++
Sbjct: 51 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNR 109
Query: 183 RALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
+A+ELI+ K+ ED + + Y V S G PY
Sbjct: 110 KAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPY 150
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 291 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 350
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 351 TITGTPAATQAAQYLITQRITYE 373
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 37 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 95
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 96 ERVVTVSGEPEQNRKAVELIIQKI 119
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 289 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 346
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 347 NRKVTITGTPAATQAAQYLITQRIT 371
>gi|451855342|gb|EMD68634.1| hypothetical protein COCSADRAFT_350318 [Cochliobolus sativus
ND90Pr]
Length = 488
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R + A +IGKGG + + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 130 HVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRGAVERILTVSGQVDAVS 186
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L++ + L + E + +RL++P+ GSIIGKAG I+ + S A
Sbjct: 187 KAFGLIV-RTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNA-- 243
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTVPYTY 208
K++ D +R + + G D A+ + L E SQ T
Sbjct: 244 KLNASDTLLPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 303
Query: 209 AGVFFSGFHGMPYGAVPPPV 228
A V G PY VP P
Sbjct: 304 ANVVPGGMSVQPY--VPQPA 321
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 417 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNS----NERLVTITGTQECNQM 472
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 473 ALYMLYSRLESE 484
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APV ++ P + + + N + GA+IGKGG+ IN+ + SG+ I++ +E +
Sbjct: 404 APVGAIPGQPLTQ----QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPTDNS 456
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+R++ I+GT + A+ ++ +L +E H
Sbjct: 457 NERLVTITGTQECNQMALYMLYSRLESEKH 486
>gi|426258298|ref|XP_004022751.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
Length = 330
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 41/199 (20%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ LAG +IG G+ I + + + I+L E P +TDR+++I G D ++
Sbjct: 151 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF--QECCPQSTDRVVLIGGKPDRVVE 208
Query: 97 AVDLVIDKLLTELHAEDQA----------------------DDVGTKTKLRLIVPNSSCG 134
+ +++D L++E + +A D G + G
Sbjct: 209 CIKIILD-LISESPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGREDLAG 267
Query: 135 SIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
SIIGK G IK +S A IKI D G DR++T+TGT D+ A L+ + +
Sbjct: 268 SIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQ 324
Query: 195 DTLYSQTMTVPYTYAGVFF 213
Y+G FF
Sbjct: 325 -------------YSGKFF 330
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 52/263 (19%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 5 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 64
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDEILRAVDLVIDKLL--- 106
GG I ++ A + + S +RI+ IS TI EIL+ + +++ L
Sbjct: 65 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEGLQLP 119
Query: 107 -----TELHAEDQADDV---------GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
++L E A + +LRL++ S G IIG GA IK +++Q
Sbjct: 120 SPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQ 179
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-----------TLYSQT 201
IK+ DR+V + G D + +++IL +SE Y +T
Sbjct: 180 TTIKL--FQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDET 237
Query: 202 MTVPYTYAG--VFFSGFHGMPYG 222
Y Y G + F G P G
Sbjct: 238 ----YDYGGFTMMFDDRRGRPVG 256
>gi|281353987|gb|EFB29571.1| hypothetical protein PANDA_008426 [Ailuropoda melanoleuca]
gi|440901689|gb|ELR52582.1| RNA-binding protein Nova-1, partial [Bos grunniens mutus]
Length = 414
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G ++
Sbjct: 80 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNR 138
Query: 183 RALELILLKLSEDTLYSQTMTVPY 206
+A+ELI+ K+ ED + + Y
Sbjct: 139 KAVELIIQKIQEDPQSGSCLNISY 162
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 320 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 379
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 380 TITGTPAATQAAQYLITQRITYE 402
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 66 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 124
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 125 ERVVTVSGEPEQNRKAVELIIQKI 148
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 318 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 375
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 376 NRKVTITGTPAATQAAQYLITQRIT 400
>gi|221043658|dbj|BAH13506.1| unnamed protein product [Homo sapiens]
Length = 385
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G ++
Sbjct: 51 QVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNR 109
Query: 183 RALELILLKLSEDTLYSQTMTVPYT--YAGVFFSGFHGMPY 221
+A+ELI+ K+ ED + + Y V S G PY
Sbjct: 110 KAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPY 150
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 291 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 350
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 351 TITGTPAATQAAQYLITQRITYE 373
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 37 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQ 95
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 96 ERVVTVSGEPEQNRKAVELIIQKI 119
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 289 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 346
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 347 NRKVTITGTPAATQAAQYLITQRIT 371
>gi|154281643|ref|XP_001541634.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411813|gb|EDN07201.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 482
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 10/162 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+ A IGKGG ++ + SGA+ +S ++ G +RI+ +SG D +
Sbjct: 138 HIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGMQDAVA 194
Query: 96 RAVDLVIDKLLTE-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A L+I L E L A A +KT LRL++P+ GSIIGK+G I+ + S A
Sbjct: 195 KAFGLIIRTLNNEPLEAPSTAQ---SKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGA 251
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ S D +R + + G D A + + L E
Sbjct: 252 RLNAS--DSCLPLSTERTLVILGVADAVHIATYYVAVTLVEQ 291
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 201 IRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDS-- 258
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 259 CLPLSTERTLVILGVADAVHIATYYVAVTLVEQL 292
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLT 175
G ++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+T
Sbjct: 418 GAPVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNS----NERLVTIT 471
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
P+P VHG S P + P + + N + GA+IGKGG+ IN+ + SG+ I+
Sbjct: 400 PAP-VHGGPSAQPAGGVVPG---APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIK 455
Query: 70 LSRSHEFFPGTTDRIIMIS 88
++ + + +R++ I+
Sbjct: 456 INEPQD---NSNERLVTIT 471
>gi|330914909|ref|XP_003296833.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
gi|311330863|gb|EFQ95085.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 30/238 (12%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R + A +IGKGG + + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 131 HVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRGAVERILTVSGQVDAVS 187
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L++ + L + E + +RL++P+ GSIIGKAG I+ + S A
Sbjct: 188 KAFGLIV-RTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGIRIREIQEASNA-- 244
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTVPYTY 208
K++ D +R + + G D A+ + L E SQ T
Sbjct: 245 KLNASDTLLPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 304
Query: 209 AGVFFSGFHGMPYGAVPPPVPAV------------PHNTAAHYG---PNMGGRKFQNN 251
A V G PY VP P P T AH G P+M G+ Q +
Sbjct: 305 ANVVPGGMSVQPY--VPQPAGGQYSHPQNFRRQEPPQRTPAHGGYGAPHMHGQPPQQS 360
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 419 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNS----NERLVTITGTQECNQM 474
Query: 184 ALELILLKLSE 194
AL ++ +L +
Sbjct: 475 ALYMLYSRLGQ 485
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKPTY-------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
V++L+ + E P+ +R L+ + L G++IGK G I + Q S A+ L+ S
Sbjct: 194 VRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGIRIREIQEASNAK--LNASDT 251
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P + +R +++ G D + AV V L+ +L
Sbjct: 252 LLPNSGERSLIVLGVADAVHIAVYYVAQTLVEQL 285
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+P + + N + GA+IGKGG+ IN+ + SG+ I++ +E + +R++ I+GT
Sbjct: 414 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPTDNSNERLVTITGT 468
>gi|147807331|emb|CAN73002.1| hypothetical protein VITISV_044056 [Vitis vinifera]
Length = 1121
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 35/227 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------- 89
R L+ G +IG+ G I ++ ARI++ PGT++R +M+S
Sbjct: 42 FRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGP---PGTSERAVMVSAKEEPDAP 98
Query: 90 ---TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
ID +LR ++D D G RL+V + GS+IGK GATIKS
Sbjct: 99 IAPAIDGLLRVHKCIMDV------ESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKS 152
Query: 147 FMDDSQAVIKISRLDHSYYGL-NDRLVTLTGTLDEQMRALELI-------LLKLSEDTLY 198
+ S ++++ + + L ND +V + G +A+ELI L+ S ++
Sbjct: 153 IQEASNCIVRVLGENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVDRSVIKVF 212
Query: 199 SQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG--PNM 243
M P T G MP P P NT G PN+
Sbjct: 213 EMEMQKPNT------QGNENMPPQQSWDPSQVFPINTGGEPGFVPNL 253
>gi|449274746|gb|EMC83824.1| RNA-binding protein Nova-1, partial [Columba livia]
Length = 407
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G ++
Sbjct: 79 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNR 137
Query: 183 RALELILLKLSEDTLYSQTMTVPY 206
+A+ELI+ K+ ED + + Y
Sbjct: 138 KAVELIIQKIQEDPQSGSCLNISY 161
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 313 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 372
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 373 TITGTPAATQAAQYLITQRITYE 395
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 65 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 123
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 124 ERVVTVSGEPEQNRKAVELIIQKI 147
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 311 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 368
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 369 NRKVTITGTPAATQAAQYLITQRIT 393
>gi|358252903|dbj|GAA50475.1| poly(rC)-binding protein 2/3/4 [Clonorchis sinensis]
Length = 859
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 24/162 (14%)
Query: 18 RSTAPVKSLSSDPTEKPTYI---RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSH 74
+ +AP+ L P + T++ R L+S G++IGK G + ++ +SGARI +S
Sbjct: 181 KQSAPISDLPVHPNPQ-TFVLIVRLLMSGKEVGSIIGKRGENVKKYREESGARINISDG- 238
Query: 75 EFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCG 134
+ +RI+ I+GT ++I A L+ K +D T+ LR+ + CG
Sbjct: 239 ----SSPERIVTITGTTEQISVAFTLMSQKF----------EDDFTQGLLRMA---TQCG 281
Query: 135 SIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
SIIGK G+ IK + + A I+++ + +R VT++G
Sbjct: 282 SIIGKGGSRIKEVRELTGASIQVA--SEALPASTERTVTISG 321
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
TE+P ++SN L G +IG+GG+T+N+ ++ S A+I++S + G +R I +SG
Sbjct: 669 TEEPVTRELIISNELIGCIIGRGGTTVNEIRNISKAQIKISNCED---GAKERKITLSGP 725
Query: 91 IDEILRAVDLVIDKLL 106
+ + A L+ + +L
Sbjct: 726 MQAVNLAQFLINNSIL 741
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVID 103
G++IGKGGS I + + +GA IQ++ E P +T+R + ISG I + V + D
Sbjct: 280 CGSIIGKGGSRIKEVRELTGASIQVAS--EALPASTERTVTISGAAKAISKCVRHLCD 335
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+RL++ GSIIGK G +K + ++S A I IS D S +R+VT+TGT ++
Sbjct: 202 VRLLMSGKEVGSIIGKRGENVKKYREESGARINIS--DGSSP---ERIVTITGTTEQISV 256
Query: 184 ALELILLKLSED 195
A L+ K +D
Sbjct: 257 AFTLMSQKFEDD 268
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
LI+ N G IIG+ G T+ + S+A IKIS + G +R +TL+G M+A
Sbjct: 676 ELIISNELIGCIIGRGGTTVNEIRNISKAQIKISNCED---GAKERKITLSG----PMQA 728
Query: 185 LELILLKLSEDTLYSQTM 202
+ L ++ L Q M
Sbjct: 729 VNLAQFLINNSILAHQQM 746
>gi|167525619|ref|XP_001747144.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774439|gb|EDQ88068.1| predicted protein [Monosiga brevicollis MX1]
Length = 511
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQL-SRSHEFFPGTTDRIIMISGTIDEILRA 97
+VS+ AGA+IG+GG+ I + Q+++ I++ S+S + DRI+ I G+ +++ A
Sbjct: 189 MIVSHSQAGAIIGQGGANIRELQAKTSTNIRVQSQSGDM---GQDRIVTIQGSSSQLVAA 245
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKI 157
++ + AE + G L+ +P + G IIGK+G TI+ D S A ++
Sbjct: 246 CMNILHLMQANDLAERGSGQQGNPPMLQFSIPEAIVGRIIGKSGRTIRHIQDVSGAFARV 305
Query: 158 SRLDHSYYGLN--DRLVTLTGTLDEQMRALELIL 189
++ +Y L R++ L+GT + RAL++ +
Sbjct: 306 --VNQAYPALEPAQRILQLSGTNSQLKRALQMCV 337
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT--TDRIIMISGTI 91
P ++F + + G +IGK G TI Q SGA ++ ++ +P RI+ +SGT
Sbjct: 269 PPMLQFSIPEAIVGRIIGKSGRTIRHIQDVSGAFARV--VNQAYPALEPAQRILQLSGTN 326
Query: 92 DEILRAVDLVIDKLLTELHAEDQ--ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
++ RA+ + + + T +D + G + ++ +P GS+IG+ GA IK
Sbjct: 327 SQLKRALQMCV-RYFTVTAGDDVNISSAAGRLERTQITIPAVFMGSVIGRQGAHIKRLRQ 385
Query: 150 DSQAVIKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELIL 189
S A + +S R D S ++T++G EQ++ + I
Sbjct: 386 SSSAEVDLSEAREDGSA------IMTISGPTAEQVKLHQYIF 421
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G+VIG+ G+ I + S A + LS + E G+ I+ ISG E ++ + +
Sbjct: 370 GSVIGRQGAHIKRLRQSSSAEVDLSEARE--DGSA--IMTISGPTAEQVKLHQYIFGHMK 425
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF---------MDDSQAVIKI 157
T HAE +++ VP ++ +IIG+ G IK +DD++ V +
Sbjct: 426 T--HAEATEGCELPVFHVQMDVPKAAVSAIIGRQGGNIKDIQRTYDVKMEVDDAERVGSV 483
Query: 158 SRLDHSYYGLNDRLVTLTGTLDEQMRA 184
LD ++ + L + +DE M A
Sbjct: 484 V-LDGTFASVQAALTRVRMLVDESMAA 509
>gi|410911650|ref|XP_003969303.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Takifugu rubripes]
Length = 581
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 33/261 (12%)
Query: 4 NESSYVPSPDVHGKRS---TAPVKSLSSDPTEKPTY-----IRFLVSNPLAGAVIGKGGS 55
+E++ P G+RS P +S S +P +R LV GA+IGK G
Sbjct: 156 DETASPEGPSEGGRRSFNARGPPRSGSPSLGARPKVQSDIPLRMLVPTQFVGAIIGKQGD 215
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA 115
TI + Q+ ++I + R G ++ I I T + A +++ + E
Sbjct: 216 TIRNLTKQTHSKIDIHRKEN--AGAAEKPITIHSTPEGSSNACRTIMEIMQKEAIDTKFT 273
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
+++ L+++V N+ G +IGK G +K D+ I IS L +R +T+
Sbjct: 274 EEI----PLKILVHNNFVGRLIGKEGRNLKKIEQDTGTKITISSLQDLTVYNPERTITVK 329
Query: 176 GTLDEQMRALELILLKLSE------DTLYSQTMTVP---YTYAGVFFSGFHGM--PYGAV 224
G ++ RA E ++ K+ E + Q+ +P G+F SG GM ++
Sbjct: 330 GAIENCGRAEEEVMKKIREAYESDVAAMNLQSNLIPGLNLNALGLFPSGTPGMGPSMSSL 389
Query: 225 PPPVPAVPHNTAAHYGPNMGG 245
PPP AH G + GG
Sbjct: 390 PPP--------GAHGGYSFGG 402
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 21/157 (13%)
Query: 7 SYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGA 66
S +P P HG S +P + + + GA+IGK G I +GA
Sbjct: 387 SSLPPPGAHGGYS------FGGNPESE--TVHLFIPTLAVGAIIGKQGQHIKQLSHFAGA 438
Query: 67 RIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRL 126
I+++ + P R+++I G + +A + KL E + G K +++L
Sbjct: 439 SIKIAPAEGMDP--KHRMVIIVGPPEAQFKAQCRIFGKLKEE-------NFFGPKEEVKL 489
Query: 127 ----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
VP+ + G +IGK G T+ + + A + + R
Sbjct: 490 EAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEVVVPR 526
>gi|119586398|gb|EAW65994.1| neuro-oncological ventral antigen 1, isoform CRA_d [Homo sapiens]
Length = 361
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G ++
Sbjct: 27 QVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNR 85
Query: 183 RALELILLKLSEDTLYSQTMTVPY 206
+A+ELI+ K+ ED + + Y
Sbjct: 86 KAVELIIQKIQEDPQSGSCLNISY 109
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 267 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 326
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 327 TITGTPAATQAAQYLITQRITYE 349
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 20 TAPVKSLSSDPTEKPTYIR---FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
T PV L T P I+ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 8 TEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG 67
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 68 I-NLQERVVTVSGEPEQNRKAVELIIQKI 95
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 265 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 322
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 323 NRKVTITGTPAATQAAQYLITQRIT 347
>gi|406607447|emb|CCH41238.1| Insulin-like growth factor 2 mRNA-binding protein 2
[Wickerhamomyces ciferrii]
Length = 329
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS AG VIGK GS I D + Q+G + +SR G DRI+ ++G +D +A
Sbjct: 39 RILVSVKEAGIVIGKNGSVIADIRDQTGVKAGVSR---VVQGCPDRILTVTGPLDSTAQA 95
Query: 98 VDLVIDKLLTELHAEDQADDVGTK----------TKLRLIVPNSSCGSIIGKAGATIKSF 147
+ ++ L T E K T LRL++PN+ G+IIG+ GA IK+
Sbjct: 96 LGMIAKALATSPLDETIFQYFPLKRLLPPGEEGSTSLRLLIPNAQMGTIIGRQGARIKTL 155
Query: 148 MD--DSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ D + V L +S +RLV L G ++ A ++I L ED
Sbjct: 156 QENYDVRLVASKDFLQNS----TERLVELQGLPEKIEIASKIIARCLIED 201
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 36/205 (17%)
Query: 22 PVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
P+K L E T +R L+ N G +IG+ G+ I Q R L S +F +T
Sbjct: 117 PLKRLLPPGEEGSTSLRLLIPNAQMGTIIGRQGARIKTLQENYDVR--LVASKDFLQNST 174
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHA-----------------------------E 112
+R++ + G ++I A ++ L+ + H+ +
Sbjct: 175 ERLVELQGLPEKIEIASKIIARCLIEDWHSAAGTSFYLPTPRIPRRSNHNNNHTTYNNHQ 234
Query: 113 DQADDVGTKTKLRLIV--PNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDR 170
+ + + +++ V P+ G +IGKAG+ I+ S A I I+ D N+R
Sbjct: 235 NNGSNHSSNSEISKTVNFPSQFVGCLIGKAGSRIQEIRKVSGAQITIASEDDDN---NER 291
Query: 171 LVTLTGTLDEQMRALELILLKLSED 195
TL G+ +AL + L ++
Sbjct: 292 SFTLVGSNKSVDKALSFLQQNLEKE 316
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
R++V G +IGK G+ I D + +SR+ G DR++T+TG LD +
Sbjct: 38 FRILVSVKEAGIVIGKNGSVIADIRDQTGVKAGVSRV---VQGCPDRILTVTGPLDSTAQ 94
Query: 184 ALELILLKLS 193
AL +I L+
Sbjct: 95 ALGMIAKALA 104
>gi|348581995|ref|XP_003476762.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Cavia porcellus]
Length = 360
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK +
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRES 130
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR+++ GSIIGK G T+K + S A I IS +R+ T+TG+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 184 ALELILLKLSED 195
A+ +I KL ED
Sbjct: 75 AVSMIAFKLDED 86
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R I I+
Sbjct: 193 DPAAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHITIT 249
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 250 GSPVSIALAQYLITACLET 268
>gi|150864547|ref|XP_001383407.2| PAB1 binding protein [Scheffersomyces stipitis CBS 6054]
gi|149385803|gb|ABN65378.2| PAB1 binding protein [Scheffersomyces stipitis CBS 6054]
Length = 500
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 10/149 (6%)
Query: 34 PTYIRFLVSNPL--AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
PTY+ + P+ A ++GK G IN + ++ RI +S + + P +RII + G
Sbjct: 102 PTYVSIRMYCPVKEASCIVGKKGEKINHIREKASVRINVSENLKNVP---ERIISVRGPA 158
Query: 92 DEILRAVDLVIDKLLTELHAEDQ-ADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
+ + RA L+ +L E ED+ A + + L+++VP+ G IIGK G+ + ++
Sbjct: 159 ENVARAFGLITRTILDE--PEDEPASMISQQYNLKILVPHPMIGFIIGKQGSKFREIEEN 216
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
S A +K + Y DR++++TG D
Sbjct: 217 SAAKLKAAEQPLPYS--TDRILSITGVGD 243
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ LV +P+ G +IGK GS + + S A+ L + + P +TDRI+ I+G D I
Sbjct: 190 LKILVPHPMIGFIIGKQGSKFREIEENSAAK--LKAAEQPLPYSTDRILSITGVGDAIHI 247
Query: 97 AV 98
A+
Sbjct: 248 AI 249
>gi|328850348|gb|EGF99514.1| hypothetical protein MELLADRAFT_73383 [Melampsora larici-populina
98AG31]
Length = 383
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 11/145 (7%)
Query: 12 PDVHGKRSTAPVKS--LSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
PD + + P+ S +DPT T +R LVS AG +IGKGG T+ + + Q+G +
Sbjct: 13 PDKSIRSNGLPINSTGAGADPTSNVT-LRSLVSTKEAGVIIGKGGKTVAEIREQTGTKAG 71
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-LHAED----QADDVGTKTKL 124
+S++ G DR++ +SG ++ + +A +V D +L L A D T T +
Sbjct: 72 VSKA---VQGVHDRVLSVSGGLEGVSKAYSIVADAILQNPLAATDPSLTVPPPTATTTAI 128
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMD 149
R++V ++ GSIIG+ G+ IK D
Sbjct: 129 RVLVSHNLMGSIIGRQGSKIKEIQD 153
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR LVS+ L G++IG+ GS I + Q SG R+ S+ E P +T+R++ + G+ E +R
Sbjct: 128 IRVLVSHNLMGSIIGRQGSKIKEIQDISGVRMVASK--EMLPQSTERVVEVQGS-PEAIR 184
Query: 97 AVDLVIDKLLTE 108
I K L E
Sbjct: 185 VAIHEIGKCLME 196
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 14/109 (12%)
Query: 7 SYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFL----VSNP--LAGAVIGKGGSTINDF 60
+Y + + +G RS SL+S P P R L +S P + G +IGKGG+ IN+
Sbjct: 268 TYHSNGNENGHRSRE--NSLASAPA--PVADRLLRTQNISIPADMVGCIIGKGGAKINEI 323
Query: 61 QSQSGARIQLSRS-HEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ SG+RI ++++ H+ T +R+ I+G+ + +A+ L+ ++L +E
Sbjct: 324 RRMSGSRISIAKTPHDD---TGERMFTITGSSEANEKALFLLYNQLESE 369
>gi|325093144|gb|EGC46454.1| KH domain RNA binding protein [Ajellomyces capsulatus H88]
Length = 499
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 10/162 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+ A IGKGG ++ + SGA+ +S ++ G +RI+ +SG D +
Sbjct: 138 HIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGMQDAVA 194
Query: 96 RAVDLVIDKLLTE-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A L+I L E L A A +KT LRL++P+ GSIIGK+G I+ + S A
Sbjct: 195 KAFGLIIRTLNNEPLEAPSTAQ---SKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGA 251
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
+ S D +R + + G D A + + L E
Sbjct: 252 RLNAS--DSCLPLSTERTLVILGVADAVHIATYYVAVTLVEQ 291
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 201 IRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDS-- 258
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 259 CLPLSTERTLVILGVADAVHIATYYVAVTLVEQL 292
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 418 GAPVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNS----NERLVTITGT 473
Query: 178 LDEQMRALELILLKLSEDTLYSQT 201
+ AL ++ +L L + T
Sbjct: 474 PECNQMALYMLYSRLGTFNLLTPT 497
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
P+P VHG S P + P + + N + GA+IGKGG+ IN+ + SG+ I+
Sbjct: 400 PAP-VHGGPSAQPAGGVVPG---APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIK 455
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLT 107
++ + + +R++ I+GT + A+ ++ +L T
Sbjct: 456 INEPQD---NSNERLVTITGTPECNQMALYMLYSRLGT 490
>gi|225563195|gb|EEH11474.1| KH domain RNA binding protein [Ajellomyces capsulatus G186AR]
gi|240275775|gb|EER39288.1| KH domain RNA-binding protein [Ajellomyces capsulatus H143]
Length = 495
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+ A IGKGG ++ + SGA+ +S ++ G +RI+ +SG D +
Sbjct: 138 HIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGMQDAVA 194
Query: 96 RAVDLVIDKLLTE-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A L+I L E L A A +KT LRL++P+ GSIIGK+G I+ + S A
Sbjct: 195 KAFGLIIRTLNNEPLEAPSTAQ---SKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGA 251
Query: 154 VIKIS 158
+ S
Sbjct: 252 RLNAS 256
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 201 IRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDS-- 258
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 259 CLPLSTERTLVILGVADAVHIATYYVAVTLVEQL 292
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 418 GAPVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNS----NERLVTITGT 473
Query: 178 LDEQMRALELILLKLSED 195
+ AL ++ +L +
Sbjct: 474 PECNQMALYMLYSRLESE 491
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
P+P VHG S P + P + + N + GA+IGKGG+ IN+ + SG+ I+
Sbjct: 400 PAP-VHGGPSAQPAGGVVPG---APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIK 455
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
++ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 456 INEPQD---NSNERLVTITGTPECNQMALYMLYSRLESEKH 493
>gi|363742963|ref|XP_423400.3| PREDICTED: tudor and KH domain-containing protein [Gallus gallus]
Length = 686
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 48 AVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLT 107
A+IG+ G+TI Q ++GARI L + +R+++I G+ ++ RA + +++
Sbjct: 85 AIIGRKGTTIRRLQQETGARIDLEGEDD----GEERLLLIWGSPSQVCRA-KAAVHQIVV 139
Query: 108 ELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGL 167
E T +L VP + G IIG G T++S S A ++ +
Sbjct: 140 E----------STPVSEQLHVPQRAVGRIIGHGGETVRSICRSSGAQVQCQHQAEAMLAP 189
Query: 168 NDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
RL+ ++GT E A +LI+ KL ED ++ Q +
Sbjct: 190 T-RLIQISGTQREVDAAKKLIMEKLVEDAVFRQELA 224
>gi|448081636|ref|XP_004194937.1| Piso0_005464 [Millerozyma farinosa CBS 7064]
gi|359376359|emb|CCE86941.1| Piso0_005464 [Millerozyma farinosa CBS 7064]
Length = 362
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 26/175 (14%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS +G +IG+ G+ I+ ++++ + +S+ PG+ +RI+ +SGT+D +A
Sbjct: 77 RVLVSAKESGCLIGQNGAVIDSIRAETNTKAGISK---LQPGSHERILTVSGTLDNSAKA 133
Query: 98 VDLVIDKL---------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
+ L L +L D+ T LRL++PN+ G++IG G
Sbjct: 134 LSYFAQALCNARVANTLNYNYFPLKQLSPVPCIDE--ETTILRLLIPNAQMGTLIGSKGI 191
Query: 143 TIKSFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSED 195
I+ Q++ IS + + G N+RLV L GT+D AL +I L ED
Sbjct: 192 RIQQI----QSMYNISMIASKAFLQGSNERLVELQGTVDNLYDALRVISRCLIED 242
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 78/191 (40%), Gaps = 46/191 (24%)
Query: 22 PVKSLSSDPT--EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
P+K LS P E+ T +R L+ N G +IG G I QS I + S F G
Sbjct: 156 PLKQLSPVPCIDEETTILRLLIPNAQMGTLIGSKGIRIQQIQSM--YNISMIASKAFLQG 213
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTK------------------ 121
+ +R++ + GT+D + A+ ++ L+ ED + VGT
Sbjct: 214 SNERLVELQGTVDNLYDALRVISRCLI-----EDFSSIVGTNYYVPKGSSANNGNLNGPT 268
Query: 122 ----------------TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYY 165
+ L PN G++IGK G+ I+ S A I IS +
Sbjct: 269 RRDSSGSSRRYGNLSVSTTTLTFPNDVVGALIGKNGSRIQGVRKISGATITIS---NEVE 325
Query: 166 GLNDRLVTLTG 176
+DR+ T+TG
Sbjct: 326 NQSDRVFTITG 336
>gi|392339927|ref|XP_003753941.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|392347297|ref|XP_003749789.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|149033413|gb|EDL88214.1| insulin-like growth factor 2, binding protein 3 [Rattus norvegicus]
Length = 579
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R T+P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQTSPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENT- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
GK G +K D+ I IS L +R +T+ G ++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRE 349
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|67968900|dbj|BAE00807.1| unnamed protein product [Macaca fascicularis]
Length = 342
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G ++
Sbjct: 8 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGIN-LQERVVTVSGEPEQNR 66
Query: 183 RALELILLKLSEDTLYSQTMTVPY 206
+A+ELI+ K+ ED + + Y
Sbjct: 67 KAVELIIQKIQEDPQSGSCLNISY 90
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 248 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 307
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 308 TITGTPAATQAAQYLITQRITYE 330
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 31 TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ + +R++ +SG
Sbjct: 3 TSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGE 61
Query: 91 IDEILRAVDLVIDKL 105
++ +AV+L+I K+
Sbjct: 62 PEQNRKAVELIIQKI 76
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 246 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 303
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 304 NRKVTITGTPAATQAAQYLITQRIT 328
>gi|338714774|ref|XP_003363150.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Equus
caballus]
Length = 360
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK +
Sbjct: 75 AVSMIAFKLDEDLCAAPTNGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRES 130
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR+++ GSIIGK G T+K + S A I IS +R+ T+TG+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 184 ALELILLKLSEDTLYSQT 201
A+ +I KL ED + T
Sbjct: 75 AVSMIAFKLDEDLCAAPT 92
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 193 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 249
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 250 GSPVSIALAQYLITACLET 268
>gi|302498875|ref|XP_003011434.1| hypothetical protein ARB_02284 [Arthroderma benhamiae CBS 112371]
gi|291174985|gb|EFE30794.1| hypothetical protein ARB_02284 [Arthroderma benhamiae CBS 112371]
Length = 561
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 22/207 (10%)
Query: 7 SYVPSPDVH----GKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQS 62
+Y P + H G RS P S T + N G +IG+ G + ++
Sbjct: 161 AYSPPSNRHYRAGGDRSPPPRNRGSGSDENNET---IEIDNKHVGLIIGRQGENLRRIEN 217
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH-AEDQADDVGTK 121
++GAR+Q S E T R+ +SG I ID++++E + A + +G
Sbjct: 218 ETGARVQFLDSAEHN--KTIRLCRLSGP-KSIRDKAKAEIDRIVSENNQARNDGRPIGQD 274
Query: 122 TK---------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
+ +++VP+ + G +IG++G T++ + S I I+R S GL R V
Sbjct: 275 GRPIDADGSETTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGL--RPV 332
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYS 199
TLTG+ RA ELIL + DT S
Sbjct: 333 TLTGSQQAIQRAKELILGIVESDTRTS 359
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V + G VIG+ G T+ D +SG RI ++R E G R + ++G+ I RA
Sbjct: 287 KIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGL--RPVTLTGSQQAIQRA 344
Query: 98 VDLVIDKLLTELHAEDQADD--------------VGTKTKLRLIVPNSSCGSIIGKAGAT 143
+L++ + ++ G K ++ +P G +IGK G T
Sbjct: 345 KELILGIVESDTRTSGNQGQREPRGQGSGGENGGGGEKLNDKMFIPKEYVGMVIGKGGET 404
Query: 144 IKSFMDDSQAVIKI 157
I+ S I I
Sbjct: 405 IRELQTLSGCKINI 418
>gi|410951301|ref|XP_003982336.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Felis catus]
Length = 360
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK +
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRES 130
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR+++ GSIIGK G T+K + S A I IS +R+ T+TG+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 184 ALELILLKLSED 195
A+ +I KL ED
Sbjct: 75 AVSMIAFKLDED 86
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 193 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 249
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 250 GSPVSIALAQYLITACLET 268
>gi|397603279|gb|EJK58384.1| hypothetical protein THAOC_21490 [Thalassiosira oceanica]
Length = 689
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 8 YVPSP--DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSG 65
YVP P + G S++ + E + + N + G +IG+GG +I Q ++
Sbjct: 184 YVPKPVSAILGAGSSSALSIYGPQSGEPVIEEKIGIPNGVVGYIIGRGGESITSMQRRTN 243
Query: 66 ARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT----- 120
R+Q+ + HE PGT R+I ++ + + A +I+ ++ E + + +G+
Sbjct: 244 CRVQIQKEHEMAPGTAQRVITLTAASKDSVAACRAIIENMVKERMVQSNSISIGSGNNAT 303
Query: 121 -------------KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL 160
+ + VP++ G +IGK G IK + S A I+I ++
Sbjct: 304 SQMAQLQKALAEGQAHVTCKVPDADVGLVIGKGGMQIKLIQEKSGANIQIPQM 356
>gi|291400301|ref|XP_002716510.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 556
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 23/233 (9%)
Query: 7 SYVPSPDV-------------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKG 53
SY+P +V H R SS + +R LV GA+IGK
Sbjct: 153 SYIPDEEVSSPSPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKE 212
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G TI + Q+ +R+ + R G ++ + I T + A ++++ + E
Sbjct: 213 GLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETK 270
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLV 172
A+++ L+++ N G +IGK G +K ++ I IS L D S Y +R +
Sbjct: 271 LAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTI 325
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVP 225
T+ GT++ A I+ KL E + M T++G F S + +G P
Sbjct: 326 TVKGTVEACASAEAEIMKKLRE--AFENDMLAVNTHSGYFSSLYPHHQFGPFP 376
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----------------------KTKLRLIVPNSSC 133
A ++ KL + A + + + + L +P +
Sbjct: 337 AEAEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>gi|413955311|gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
gi|413955312|gb|AFW87961.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 543
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI-- 87
P T R+L ++ G++IG+GG ++++ A+I++ E PG +R+I I
Sbjct: 33 PGPDDTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIG---ESVPGCEERVITIFS 89
Query: 88 ----SGTIDEILRAVDLVIDKLLT--------ELHAEDQADDVGTKTKLRLIVPNSSCGS 135
+ TID+ V D L E + ++++ + +RL+VP+ G
Sbjct: 90 SSRRTNTIDDAEDKVCPAQDALFRVHERLATDESFGNEDSEEISPQVTVRLLVPSDQIGC 149
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
I+GK G I+ ++ A I++ DH + D L+ ++G + +AL + +L
Sbjct: 150 ILGKGGHIIQGIRSETGAQIRVLSKDHIPACAISGDELLQISGDMVVVKKALCQVSSRLH 209
Query: 194 EDTLYSQ-----TMTVPYTYAGVFFSGFHGMPYGAVPPPVP 229
+ SQ ++T PY G G P + P +P
Sbjct: 210 NNPSKSQHLLASSLTQPYP-GGTHLGGSSAAPVVGITPVIP 249
>gi|426340777|ref|XP_004034304.1| PREDICTED: poly(rC)-binding protein 4 isoform 4 [Gorilla gorilla
gorilla]
Length = 360
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK +
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRES 130
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR+++ GSIIGK G T+K + S A I IS +R+ T+TG+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 184 ALELILLKLSED 195
A+ +I KL ED
Sbjct: 75 AVSMIAFKLDED 86
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 193 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 249
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 250 GSPVSIALAQYLITACLET 268
>gi|291575150|ref|NP_065151.2| poly(rC)-binding protein 4 isoform a [Homo sapiens]
gi|114587204|ref|XP_001170813.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan troglodytes]
gi|16877720|gb|AAH17098.1| PCBP4 protein [Homo sapiens]
gi|119585570|gb|EAW65166.1| poly(rC) binding protein 4, isoform CRA_b [Homo sapiens]
Length = 360
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK +
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRES 130
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR+++ GSIIGK G T+K + S A I IS +R+ T+TG+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 184 ALELILLKLSED 195
A+ +I KL ED
Sbjct: 75 AVSMIAFKLDED 86
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 193 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 249
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 250 GSPVSIALAQYLITACLET 268
>gi|335299140|ref|XP_003358506.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Sus scrofa]
Length = 360
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK +
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRES 130
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR+++ GSIIGK G T+K + S A I IS +R+ T+TG+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 184 ALELILLKLSED 195
A+ +I KL ED
Sbjct: 75 AVSMIAFKLDED 86
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 193 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 249
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 250 GSPVSIALAQYLITACLET 268
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQ--SGARIQLSRSHEFFPGT----TDRIIMI 87
P +R ++ G++IGK G+ I + + GA I S GT T++ +
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSL--GTVLLSTNQGFSV 158
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQAD-------DVGTKTKLR-LIVPNSSCGSIIGK 139
G + A + +L HA A D GT+T + +VPN G +IG+
Sbjct: 159 QGQYGAVTPAEVTKLQQL--SGHAVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGR 216
Query: 140 AGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
G+ I S A IKI + G +R VT+TG+
Sbjct: 217 QGSKISEIRQMSGAHIKI---GNQAEGAGERHVTITGS 251
>gi|301767224|ref|XP_002919001.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Ailuropoda
melanoleuca]
Length = 360
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK +
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRES 130
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR+++ GSIIGK G T+K + S A I IS +R+ T+TG+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 184 ALELILLKLSED 195
A+ +I KL ED
Sbjct: 75 AVSMIAFKLDED 86
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 193 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 249
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 250 GSPVSIALAQYLITACLET 268
>gi|30354044|gb|AAH51679.1| Insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP K P + P +R LV GA+IGK G+TI + Q+ ++I + R G
Sbjct: 187 APAKQ---QPVDIP--LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGA 239
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
++ I + T + A ++++ + E AD V L+++ N+ G +IGK
Sbjct: 240 AEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADGV----PLKILAHNNFVGRLIGKE 295
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
G +K D++ I IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVVITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|413955310|gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 528
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI-- 87
P T R+L ++ G++IG+GG ++++ A+I++ E PG +R+I I
Sbjct: 33 PGPDDTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIG---ESVPGCEERVITIFS 89
Query: 88 ----SGTIDEILRAVDLVIDKLLT--------ELHAEDQADDVGTKTKLRLIVPNSSCGS 135
+ TID+ V D L E + ++++ + +RL+VP+ G
Sbjct: 90 SSRRTNTIDDAEDKVCPAQDALFRVHERLATDESFGNEDSEEISPQVTVRLLVPSDQIGC 149
Query: 136 IIGKAGATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
I+GK G I+ ++ A I++ DH + D L+ ++G + +AL + +L
Sbjct: 150 ILGKGGHIIQGIRSETGAQIRVLSKDHIPACAISGDELLQISGDMVVVKKALCQVSSRLH 209
Query: 194 EDTLYSQ-----TMTVPYTYAGVFFSGFHGMPYGAVPPPVP 229
+ SQ ++T PY G G P + P +P
Sbjct: 210 NNPSKSQHLLASSLTQPYP-GGTHLGGSSAAPVVGITPVIP 249
>gi|295673384|ref|XP_002797238.1| Poly(rC)-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282610|gb|EEH38176.1| Poly(rC)-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 495
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+ A IGKGG ++ + SGA+ +S ++ G +RI+ +SG D +
Sbjct: 138 HIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGMQDAVA 194
Query: 96 RAVDLVIDKLLTE-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A L+I L E L A A +KT LRL++P+ GSIIGK+G I+ + S A
Sbjct: 195 KAFGLIIRTLNNEPLEAPSTAQ---SKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGA 251
Query: 154 VIKIS 158
+ S
Sbjct: 252 RLNAS 256
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 9 VPSP-DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR 67
P P VHG S+ PV + P + + N + GA+IGKGG+ IN+ + SG+
Sbjct: 397 APQPGQVHGAPSSQPVGGVVPG---APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSV 453
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
I+++ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 454 IKINEPQD---NSNERLVTITGTPECNQMALYMLYSRLESEKH 493
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 201 IRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDS-- 258
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 259 CLPLSTERTLIILGVADAVHIATYYVAVTLVEQL 292
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 418 GAPVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNS----NERLVTITGT 473
Query: 178 LDEQMRALELILLKLSED 195
+ AL ++ +L +
Sbjct: 474 PECNQMALYMLYSRLESE 491
>gi|226292229|gb|EEH47649.1| Poly(rC)-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 495
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+ A IGKGG ++ + SGA+ +S ++ G +RI+ +SG D +
Sbjct: 138 HIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGMQDAVA 194
Query: 96 RAVDLVIDKLLTE-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A L+I L E L A A +KT LRL++P+ GSIIGK+G I+ + S A
Sbjct: 195 KAFGLIIRTLNNEPLEAPSTAQ---SKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGA 251
Query: 154 VIKIS 158
+ S
Sbjct: 252 RLNAS 256
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 201 IRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDS-- 258
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 259 CLPLSTERTLIILGVADAVHIATYYVAVTLVEQL 292
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 3 TNESSYVPSP-------DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGS 55
T + PSP VHG S+ PV + P + + N + GA+IGKGG+
Sbjct: 385 TGAGPHQPSPYGAPQQSQVHGAPSSQPVGGVVPG---APVTQQIFIPNDMVGAIIGKGGA 441
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
IN+ + SG+ I+++ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 442 KINEIRHLSGSVIKINEPQD---NSNERLVTITGTPECNQMALYMLYSRLESEKH 493
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 418 GAPVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNS----NERLVTITGT 473
Query: 178 LDEQMRALELILLKLSED 195
+ AL ++ +L +
Sbjct: 474 PECNQMALYMLYSRLESE 491
>gi|448086121|ref|XP_004196024.1| Piso0_005464 [Millerozyma farinosa CBS 7064]
gi|359377446|emb|CCE85829.1| Piso0_005464 [Millerozyma farinosa CBS 7064]
Length = 362
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 26/175 (14%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
R LVS +G +IG+ G+ I+ ++++ + +S+ PG+ +RI+ +SGT+D +A
Sbjct: 77 RVLVSAKESGCLIGQNGAVIDSIRAETNTKAGISK---LQPGSHERILTVSGTLDNSAKA 133
Query: 98 VDLVIDKL---------------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGA 142
+ L L +L D+ T LRL++PN+ G++IG G
Sbjct: 134 LSYFAQALCNARVANTLNYNYFPLKQLSPVPCIDE--ETTILRLLIPNAQMGTLIGSKGI 191
Query: 143 TIKSFMDDSQAVIKISRLDHSYY--GLNDRLVTLTGTLDEQMRALELILLKLSED 195
I+ Q++ IS + + G N+RLV L GT+D AL +I L ED
Sbjct: 192 RIQQI----QSMYNISMIASKAFLQGSNERLVELQGTVDNLYDALRVISRCLIED 242
>gi|149236583|ref|XP_001524169.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452545|gb|EDK46801.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 733
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 80/144 (55%), Gaps = 8/144 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R + A ++GK GS IN + ++ RIQ+S + P +RI+ + GT + I R
Sbjct: 336 VRIICPVKEASTIVGKQGSKINHLREKANVRIQVSENIRDVP---ERIVTVRGTPENIAR 392
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L++ +L+E ED+ ++ ++ L+L++P++ G +IGK G+ + ++S A +
Sbjct: 393 AYGLIVRTILSE--PEDEPANINSQQYTLKLLIPHALIGFLIGKQGSKFREIEENSAAKL 450
Query: 156 KISRLDHSYYGLNDRLVTLTGTLD 179
K + Y DR+++++G D
Sbjct: 451 KAAEQPLPYS--TDRVLSVSGVGD 472
>gi|338723967|ref|XP_001497902.3| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Equus caballus]
Length = 638
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P + P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 239 RQGSPGSASKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 295
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 296 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 350
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
GK G +K D+ I IS L +R +T+ G ++ +A E I+ K+ E
Sbjct: 351 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITIKGNVETCAKAEEEIMKKIRE 407
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 477 GAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKIK 534
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 535 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 590
Query: 167 LNDRLVTLTG---TLDEQMRALELILLKLSE 194
+ +V +TG R ++ IL ++ +
Sbjct: 591 NDQVVVKITGHFYACQVAQRKIQEILTQVKQ 621
>gi|327295298|ref|XP_003232344.1| hypothetical protein TERG_07192 [Trichophyton rubrum CBS 118892]
gi|326465516|gb|EGD90969.1| hypothetical protein TERG_07192 [Trichophyton rubrum CBS 118892]
Length = 563
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 22/207 (10%)
Query: 7 SYVPSPDVH----GKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQS 62
+Y P + H G RS P + P + + N G +IG+ G + ++
Sbjct: 161 AYSPPSNRHYRAGGDRSPPP---RNRGPGSEENNETIEIDNKHVGLIIGRQGENLRRIEN 217
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE----------LHAE 112
++GAR+Q S E T R+ +SG I ID++++E + +
Sbjct: 218 ETGARVQFLDSAEHN--KTIRLCRLSGP-KSIRDKAKAEIDRIVSENNQARNDGRPIGQD 274
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
+ D +++VP+ + G +IG++G T++ + S I I+R S GL R V
Sbjct: 275 GRPGDADGSDTTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGL--RPV 332
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYS 199
TLTG+ RA ELIL + DT S
Sbjct: 333 TLTGSQQAIQRAKELILGIVESDTRTS 359
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V + G VIG+ G T+ D +SG RI ++R E G R + ++G+ I RA
Sbjct: 287 KIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGL--RPVTLTGSQQAIQRA 344
Query: 98 VDLVIDKLLTELHAEDQADD--------------VGTKTKLRLIVPNSSCGSIIGKAGAT 143
+L++ + ++ G K ++ +P G +IGK G T
Sbjct: 345 KELILGIVESDTRTSGNQGQREPRGQGLGGENGGGGEKLNEKMFIPKEYVGMVIGKGGET 404
Query: 144 IKSFMDDSQAVIKI 157
I+ S I I
Sbjct: 405 IRELQTLSGCKINI 418
>gi|225681071|gb|EEH19355.1| Poly(rC)-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 495
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+IR ++S+ A IGKGG ++ + SGA+ +S ++ G +RI+ +SG D +
Sbjct: 138 HIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGMQDAVA 194
Query: 96 RAVDLVIDKLLTE-LHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+A L+I L E L A A +KT LRL++P+ GSIIGK+G I+ + S A
Sbjct: 195 KAFGLIIRTLNNEPLEAPSTAQ---SKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGA 251
Query: 154 VIKIS 158
+ S
Sbjct: 252 RLNAS 256
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 9 VPSP-DVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR 67
P P VHG S+ PV + P + + N + GA+IGKGG+ IN+ + SG+
Sbjct: 397 APQPSQVHGAPSSQPVGGVVPG---APVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSV 453
Query: 68 IQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
I+++ + + +R++ I+GT + A+ ++ +L +E H
Sbjct: 454 IKINEPQD---NSNERLVTITGTPECNQMALYMLYSRLESEKH 493
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKP------TY-IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
+++L+++P E P TY +R L+ + L G++IGK G I + Q SGAR+ S S
Sbjct: 201 IRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDS-- 258
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P +T+R ++I G D + A V L+ +L
Sbjct: 259 CLPLSTERTLIILGVADAVHIATYYVAVTLVEQL 292
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGT 177
G ++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT
Sbjct: 418 GAPVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNS----NERLVTITGT 473
Query: 178 LDEQMRALELILLKLSED 195
+ AL ++ +L +
Sbjct: 474 PECNQMALYMLYSRLESE 491
>gi|198427864|ref|XP_002125995.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein K
[Ciona intestinalis]
Length = 402
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 15/167 (8%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII-MI 87
+P++K +R L+ + AGA+IGKGG+ I D + + A +Q+ SH F +RI+ +
Sbjct: 43 EPSDK-IELRVLIPSHTAGAIIGKGGANIRDLRQEFNANVQVPDSHGF-----ERIVSAV 96
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+ TI++ V++ L +H + VG LR++V S G+IIG G+ IK
Sbjct: 97 AKTIEDAANICGKVVEALNERMH---HPEKVGC---LRMLVHKSQAGTIIGLKGSRIKEL 150
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
+ + A IK+++ DR+ + GT D ++ + IL L +
Sbjct: 151 REMTGANIKVNQ--ECCPESTDRVCQVRGTADVVVKCVARILEHLQQ 195
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 119 GTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
G + ++ +P S S+IGK G I+ +DS AVI I D + G +R++++TG
Sbjct: 326 GDQKTTQVTIPTSCAASVIGKTGQRIRQIREDSGAVIVI---DEAGPGEEERVISITGN- 381
Query: 179 DEQMRALELILLKLSED 195
+EQ + + +L K +E+
Sbjct: 382 EEQTQNAQFLLQKNAEE 398
>gi|345485197|ref|XP_003425215.1| PREDICTED: far upstream element-binding protein 1-like isoform 2
[Nasonia vitripennis]
Length = 751
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT-TDRIIMISGTIDEILRA 97
+ V + G +IGKGG TI + Q+GA +L R + PGT TD+ I GT +++ A
Sbjct: 315 YPVPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRN---PGTDTDKFFTIRGTPEQVEHA 371
Query: 98 VDLVIDKLL-----------TELHAEDQADDV---GTKTKLRLIVPNSSCGSIIGKAGAT 143
+ +KL T E DV G K ++ VP + CG IIGK G T
Sbjct: 372 KRVFAEKLGGGMGSSSNGYPTGRPNEYGGWDVNRQGNKVEVTYPVPTNKCGIIIGKGGET 431
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
IK + A ++ R + ++ T+ GT ++ A + KL + +
Sbjct: 432 IKQINQQTGAHCELDRRNPGT--ETEKFFTIKGTPEQVEHAQRIFSEKLGNNGM 483
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 50/203 (24%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT-TDRIIMISGTID 92
P ++ ++ P G +IGKGG TI Q +SGA++ + + PG ++ + I+G
Sbjct: 183 PGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDG---PGQEQEKPLRITGDPQ 239
Query: 93 EILRAVDLVIDKLLTEL----------------------HAEDQADDVGT---------- 120
++ A LV + L+ E ++E D G
Sbjct: 240 KVEHAKQLVYE-LIAEKEMQLYNRGTRNFSSNNSFSQDGNSESGEDRRGNGVTGRPSEYG 298
Query: 121 -----------KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
K + VP++ CG IIGK G TIK + A ++ R + D
Sbjct: 299 SWEGNRPAGEGKVEFSYPVPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGT--DTD 356
Query: 170 RLVTLTGTLDEQMRALELILLKL 192
+ T+ GT ++ A + KL
Sbjct: 357 KFFTIRGTPEQVEHAKRVFAEKL 379
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT-TDRIIMISGTIDEIL 95
+ + V G +IGKGG TI Q+GA +L R + PGT T++ I GT +++
Sbjct: 412 VTYPVPTNKCGIIIGKGGETIKQINQQTGAHCELDRRN---PGTETEKFFTIKGTPEQVE 468
Query: 96 RAVDLVIDKL 105
A + +KL
Sbjct: 469 HAQRIFSEKL 478
>gi|348562599|ref|XP_003467097.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cavia porcellus]
Length = 599
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 221 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 278
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D+ I
Sbjct: 279 ACRMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTDTKIT 334
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 335 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 372
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ + GA+IGK G I + A I+++ P + R+++I+G + +
Sbjct: 430 VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPDSKVRMVIITGPPEAQFK 487
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + ++V +T +R VP S+ G +IGK G T+ + + A +
Sbjct: 488 AQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGKGGKTVNELQNLTAAEVV 544
Query: 157 ISR 159
+ R
Sbjct: 545 VPR 547
>gi|345485195|ref|XP_001603038.2| PREDICTED: far upstream element-binding protein 1-like isoform 1
[Nasonia vitripennis]
Length = 767
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 20/174 (11%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT-TDRIIMISGTIDEILRA 97
+ V + G +IGKGG TI + Q+GA +L R + PGT TD+ I GT +++ A
Sbjct: 331 YPVPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRN---PGTDTDKFFTIRGTPEQVEHA 387
Query: 98 VDLVIDKLL-----------TELHAEDQADDV---GTKTKLRLIVPNSSCGSIIGKAGAT 143
+ +KL T E DV G K ++ VP + CG IIGK G T
Sbjct: 388 KRVFAEKLGGGMGSSSNGYPTGRPNEYGGWDVNRQGNKVEVTYPVPTNKCGIIIGKGGET 447
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
IK + A ++ R + ++ T+ GT ++ A + KL + +
Sbjct: 448 IKQINQQTGAHCELDRRNPGT--ETEKFFTIKGTPEQVEHAQRIFSEKLGNNGM 499
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 50/203 (24%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT-TDRIIMISGTID 92
P ++ ++ P G +IGKGG TI Q +SGA++ + + PG ++ + I+G
Sbjct: 199 PGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDG---PGQEQEKPLRITGDPQ 255
Query: 93 EILRAVDLVIDKLLTEL----------------------HAEDQADDVGT---------- 120
++ A LV + L+ E ++E D G
Sbjct: 256 KVEHAKQLVYE-LIAEKEMQLYNRGTRNFSSNNSFSQDGNSESGEDRRGNGVTGRPSEYG 314
Query: 121 -----------KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLND 169
K + VP++ CG IIGK G TIK + A ++ R + D
Sbjct: 315 SWEGNRPAGEGKVEFSYPVPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGT--DTD 372
Query: 170 RLVTLTGTLDEQMRALELILLKL 192
+ T+ GT ++ A + KL
Sbjct: 373 KFFTIRGTPEQVEHAKRVFAEKL 395
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 29/184 (15%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + + G +IG+GG I QS++G +IQ++ P +R ++G+ D + RA +L
Sbjct: 100 VPDKMVGLIIGRGGEQITRLQSETGCKIQMAAESGGMP---ERTCTLTGSRDAVNRAKEL 156
Query: 101 VIDKLLTELH-AEDQADD---------------------VGTKTKLRLIVPNSSCGSIIG 138
V + + ED G + +++P G IIG
Sbjct: 157 VQSIVNQRVKPGEDLIPGANPPYPGPASSASSSVTASILAGHPGFVEIMIPGPKVGLIIG 216
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELI--LLKLSEDT 196
K G TIK + S A K+ + ++ + +TG + A +L+ L+ E
Sbjct: 217 KGGETIKQLQEKSGA--KMVVIQDGPGQEQEKPLRITGDPQKVEHAKQLVYELIAEKEMQ 274
Query: 197 LYSQ 200
LY++
Sbjct: 275 LYNR 278
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT-TDRIIMISGTIDEIL 95
+ + V G +IGKGG TI Q+GA +L R + PGT T++ I GT +++
Sbjct: 428 VTYPVPTNKCGIIIGKGGETIKQINQQTGAHCELDRRN---PGTETEKFFTIKGTPEQVE 484
Query: 96 RAVDLVIDKL 105
A + +KL
Sbjct: 485 HAQRIFSEKL 494
>gi|341896324|gb|EGT52259.1| hypothetical protein CAEBREN_15214 [Caenorhabditis brenneri]
Length = 862
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ---LSRSHEFFPGTTDRIIMISGTIDE 93
IR +V +IG GSTI + + R++ LS+ G +RI+ + G +
Sbjct: 321 IRCVVEGKYQSVIIGPHGSTIKEIAQSTHCRVEFVNLSKRERTVLGNNERILTVHGNAEH 380
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
+AV ++ + +E +D D+VG LRL N CG +IGKAG++IK M +
Sbjct: 381 ASKAVSRILHVIQSEALKDD--DNVGVDIVLRLRAHNQLCGRLIGKAGSSIKEIMQKTGT 438
Query: 154 VIKISR 159
I +++
Sbjct: 439 NITVTK 444
>gi|168013158|ref|XP_001759268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689581|gb|EDQ75952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 30/195 (15%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS--------- 88
R L P G+VIGKGGS I + +SGA+I+++ + PG +R+I+IS
Sbjct: 6 RILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIA---DAIPGVDERVILISSTDRGNDRG 62
Query: 89 ----GTIDEILRAVD--------LVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSI 136
G +E+ A + ++ D + + DQ ++ + RL+VPN+ G +
Sbjct: 63 RGKDGNSEELTPAQEALFKVHARIIADVETSGIDGSDQEEEPSQQVVTRLLVPNNQIGCL 122
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
+GK G I+ + A I++ D D LV ++G + +AL I +L E
Sbjct: 123 LGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFISARLQE 182
Query: 195 DTLYSQTMTVPYTYA 209
+ + P +YA
Sbjct: 183 NPPRDR----PQSYA 193
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D E R L + G+VIGKGGS I++ + +GARI+++ + PG+ +R+I++S
Sbjct: 254 DSGENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIANA---VPGSDERVIIVS 310
Query: 89 GTI---DEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIK 145
D A++ +I ++ + + AE D G T RL+VP + G ++GK G+ I+
Sbjct: 311 ALELPGDSFSPALEAMI-QVQSRITAEMGGDKDGIIT-TRLLVPTNQIGCLLGKGGSIIE 368
Query: 146 SFMDDSQAVIKI 157
++A I++
Sbjct: 369 DMRRATRANIRV 380
>gi|359479585|ref|XP_002275698.2| PREDICTED: uncharacterized protein LOC100266515 [Vitis vinifera]
Length = 858
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 25/222 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE--- 93
R L+ G +IG+ G I ++ ARI++ PGT++R +M+S +
Sbjct: 42 FRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGP---PGTSERAVMVSAKEEPDAP 98
Query: 94 ILRAVD--LVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
I A+D L + K + ++ + D G RL+V + GS+IGK GATIKS + S
Sbjct: 99 IAPAIDGLLRVHKCIMDVES-DVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEAS 157
Query: 152 QAVIKISRLDHSYYGL-NDRLVTLTGTLDEQMRALELI-------LLKLSEDTLYSQTMT 203
++++ + + L ND +V + G +A+ELI L+ S ++ M
Sbjct: 158 NCIVRVLGENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVDRSVIKVFEMEMQ 217
Query: 204 VPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYG--PNM 243
P T G MP P P NT G PN+
Sbjct: 218 KPNT------QGNENMPPQQSWDPSQVFPINTGGEPGFVPNL 253
>gi|351712576|gb|EHB15495.1| RNA-binding protein Nova-1 [Heterocephalus glaber]
Length = 458
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G ++
Sbjct: 124 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNR 182
Query: 183 RALELILLKLSEDTLYSQTMTVPY 206
+A+ELI+ K+ ED + + Y
Sbjct: 183 KAVELIIQKIQEDPQSGSCLNISY 206
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 364 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 423
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 424 TITGTPAATQAAQYLITQRITYE 446
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 110 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 168
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 169 ERVVTVSGEPEQNRKAVELIIQKI 192
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 362 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 419
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 420 NRKVTITGTPAATQAAQYLITQRIT 444
>gi|297735516|emb|CBI17956.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 10/162 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE--- 93
R L+ G +IG+ G I ++ ARI++ + PGT++R +M+S +
Sbjct: 42 FRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKIL---DGPPGTSERAVMVSAKEEPDAP 98
Query: 94 ILRAVD--LVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
I A+D L + K + ++ + D G RL+V + GS+IGK GATIKS + S
Sbjct: 99 IAPAIDGLLRVHKCIMDVES-DVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEAS 157
Query: 152 QAVIKISRLDHSYYGL-NDRLVTLTGTLDEQMRALELILLKL 192
++++ + + L ND +V + G +A+ELI L
Sbjct: 158 NCIVRVLGENLPLFALQNDTVVEIQGEPASVHKAVELIASNL 199
>gi|169617928|ref|XP_001802378.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
gi|111059439|gb|EAT80559.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
Length = 485
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
++R + A +IGKGG + + SGA+ +S ++ G +RI+ +SG +D +
Sbjct: 128 HLRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRGAVERILTVSGQVDAVS 184
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+A L++ + L + E + +RL++P+ GSIIGKAG I+ + S A
Sbjct: 185 KAFGLIV-RTLNQEDLEAPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNA-- 241
Query: 156 KISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-------TLYSQTMTVPYTY 208
K++ D +R + + G D A+ + L E SQ T
Sbjct: 242 KLNASDTLLPNSGERSLVVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 301
Query: 209 AGVFFSGFHGMPYGAVPPPV 228
A V G PY VP P
Sbjct: 302 ANVVPGGMSVQPY--VPQPA 319
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 416 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNS----NERLVTITGTQECNQM 471
Query: 184 ALELILLKLSE 194
AL ++ +L E
Sbjct: 472 ALYMLYSRLGE 482
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
+P HG P S+ P + + + N + GA+IGKGG+ IN+ + SG+ I++
Sbjct: 393 APVPHGGPPNQPPVSMPGQPLTQ----QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI 448
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH 110
+E + +R++ I+GT + A+ ++ +L H
Sbjct: 449 ---NEPTDNSNERLVTITGTQECNQMALYMLYSRLGEGPH 485
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 23 VKSLSSDPTEKPTY-------IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE 75
V++L+ + E P+ +R L+ + L G++IGK G I + Q S A+ L+ S
Sbjct: 191 VRTLNQEDLEAPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAK--LNASDT 248
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTEL 109
P + +R +++ G D + AV V L+ +L
Sbjct: 249 LLPNSGERSLVVLGVADAVHIAVYYVAQTLVEQL 282
>gi|351713542|gb|EHB16461.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Heterocephalus
glaber]
Length = 577
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACRMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEITKKVRE 349
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
>gi|401626761|gb|EJS44683.1| pbp2p [Saccharomyces arboricola H-6]
Length = 416
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+D ++R L A ++G G+TI+ +S++ ARI +S + G +RI+
Sbjct: 62 STDHVPSHVHLRMLCLVKHASLIVGHKGATISKIKSETSARINVSNN---IRGVPERIVY 118
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ GT D++ +A +++ LL E EDQ +D+ + + L++P+ G IIGK G+ ++
Sbjct: 119 VRGTCDDVAKAYSMIVRALLEEHENEDQEEDI--EVTINLLIPHHLMGCIIGKRGSRLRE 176
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
D S A K+ + NDR++T++G D
Sbjct: 177 IEDLSAA--KLFASPNQLLLSNDRILTISGVPD 207
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D D V + LR++ I+G GATI ++ A I +S ++ G+ +R+V
Sbjct: 61 DSTDHVPSHVHLRMLCLVKHASLIVGHKGATISKIKSETSARINVS---NNIRGVPERIV 117
Query: 173 TLTGTLDEQMRALELILLKL 192
+ GT D+ +A +I+ L
Sbjct: 118 YVRGTCDDVAKAYSMIVRAL 137
>gi|357145086|ref|XP_003573519.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 632
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R + G VIGKGG TI + +SGA I + + + + T D
Sbjct: 315 LRVVCPGDKIGLVIGKGGMTIKSIRKESGANIDVDDAKNDREESIITVTSTEATDDVKSA 374
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
AV+ V LL + D +D + +RL+VP + G +IGK G+ + + S+A+I
Sbjct: 375 AVEAV---LLLQAKINDGIED---RMHIRLLVPGNVIGCLIGKGGSIVNDMRNKSKAIIH 428
Query: 157 ISRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
IS+ +D LV + G +D+ AL I+L+L ED L
Sbjct: 429 ISKGSKPRRASSSDELVEVFGEVDKLRDALVQIVLRLREDVL 470
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 55/245 (22%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI---------- 87
R L + + G+VIGK G IN + Q+ A++++ + +PG R+I++
Sbjct: 42 RILCPDKVIGSVIGKNGKVINSIRQQTNAKVKVV---DPYPGADKRVILVYCHVHHRDLT 98
Query: 88 ---------------SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSS 132
+ +L+ D +++ L ++D+ + ++VP S
Sbjct: 99 HRDIDVDDDDDREPVCAAQNALLKVHDAIVEALAINSDSDDE--------EANILVPASQ 150
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKI-----SRLDHSYYGLNDRLVTLTGTLDEQMRAL-- 185
S+IGK+G+ IK S++ IK+ S + HS D V +TG +AL
Sbjct: 151 AASVIGKSGSVIKRLRSISKSSIKVRPKDPSEVTHSCAMSFDNFVQITGDARAVKKALFA 210
Query: 186 -----------ELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHN 234
E+I L+ S L ++ +P S F+ + GA+P P++P
Sbjct: 211 VSAIIYKSPSKEIIPLETSVQEL-PPSIIIPSELPVYPASNFYSLSDGAMPSGHPSLPIL 269
Query: 235 TAAHY 239
A H+
Sbjct: 270 GAPHH 274
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR-SHEFFPGTTDRIIM 86
+D E +IR LV + G +IGKGGS +ND +++S A I +S+ S ++D ++
Sbjct: 387 NDGIEDRMHIRLLVPGNVIGCLIGKGGSIVNDMRNKSKAIIHISKGSKPRRASSSDELVE 446
Query: 87 ISGTIDEILRAVDLVIDKLLTEL---HAEDQADDVGTKTKLRLIVP 129
+ G +D++ A+ ++ +L ++ E Q D K + + P
Sbjct: 447 VFGEVDKLRDALVQIVLRLREDVLKDSVERQNSDKDGKRTIAITEP 492
>gi|218193355|gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indica Group]
Length = 510
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
R L+ GA+IG+ G I +S ARI++ + PG +R +MIS DE
Sbjct: 110 FRILIPAQKVGAIIGRKGEFIKKMCEESKARIKIL---DGPPGVPERTVMISAK-DEPDA 165
Query: 97 AVDLVID------KLLTELHAEDQAD---DVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+ +D K +T+ D ++ RL+VP S GS+IGK GATIKS
Sbjct: 166 PISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSI 225
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
D S+++++I +DR+V + G +ALE I L
Sbjct: 226 QDSSKSIVRIVETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 270
>gi|19075184|ref|NP_587684.1| RNA-binding protein [Schizosaccharomyces pombe 972h-]
gi|74626925|sp|O74919.1|RNC1_SCHPO RecName: Full=RNA-binding protein rnc1; AltName: Full=RNA-binding
protein that suppresses calcineurin deletion 1
gi|3702642|emb|CAA21234.1| RNA-binding protein that suppresses calcineurin deletion Rnc1
[Schizosaccharomyces pombe]
Length = 398
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+S AG +IGK G + + +S + + ++++ P DR++ ISG ++ ++R
Sbjct: 96 LRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKA---VPNVHDRVLTISGPLENVVR 152
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A +ID + + D T KLRL++ +S GSIIG+ G IK D +
Sbjct: 153 AYRFIIDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRM 212
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLD 179
S+ L S +R V + GT+D
Sbjct: 213 IASKDMLPQS----TERTVEIHGTVD 234
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K + +P G IIG+ G+ I S + I I++ H G +R+ T+TGT +E
Sbjct: 320 KVTQNISIPADMVGCIIGRGGSKISEIRRTSGSKISIAKEPHDETG--ERMFTITGTHEE 377
Query: 181 QMRALELILLKL 192
+AL L+ +L
Sbjct: 378 NEKALFLLYQQL 389
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ G +IG+GGS I++ + SG++I +++ E T +R+ I+GT +E +A+ L+ +
Sbjct: 331 MVGCIIGRGGSKISEIRRTSGSKISIAK--EPHDETGERMFTITGTHEENEKALFLLYQQ 388
Query: 105 LLTE 108
L E
Sbjct: 389 LEME 392
>gi|291394537|ref|XP_002713869.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Oryctolagus cuniculus]
Length = 517
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P + P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 119 RQGSPGSASKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN-- 174
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 175 AGAAEKSITILSTPE----GTSAACKSILEIMHKEAQDTKFTEEIPLKILAHNNFVGRLI 230
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
GK G +K D+ I IS L +R +T+ G+++ +A E I+ K+ E
Sbjct: 231 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRE 287
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 356 GAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKIK 413
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 414 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 469
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 470 NDQVVVKITG 479
>gi|360045566|emb|CCD83114.1| rna-binding protein related [Schistosoma mansoni]
Length = 820
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 69/125 (55%), Gaps = 6/125 (4%)
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD-----DVGTKTKLRLIVPN 130
F GTT+R+ +I G+ D ++ + ++D+++ + +V +++++VPN
Sbjct: 11 LFSGTTERVCLIIGSFDGVITVHNYIMDRIMEKPDPNPNTTGEGRLNVERHKQVKILVPN 70
Query: 131 SSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILL 190
S+ G +IGK G+ I+ + + A ++IS+ + L +R + + G LD+ A+ LIL
Sbjct: 71 STAGMVIGKGGSYIQEIKEKTGAYVQISQKSRE-FNLLERCIVVAGELDQTRSAVHLILN 129
Query: 191 KLSED 195
++ D
Sbjct: 130 VIATD 134
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS-RSHEFFPGTTDRIIMISGT 90
E+ ++ LV N AG VIGKGGS I + + ++GA +Q+S +S EF +R I+++G
Sbjct: 59 ERHKQVKILVPNSTAGMVIGKGGSYIQEIKEKTGAYVQISQKSREF--NLLERCIVVAGE 116
Query: 91 IDEILRAVDLVIDKLLTE 108
+D+ AV L+++ + T+
Sbjct: 117 LDQTRSAVHLILNVIATD 134
>gi|356564071|ref|XP_003550280.1| PREDICTED: uncharacterized protein LOC100782717 [Glycine max]
Length = 672
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 29/191 (15%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N G +IGKGG TI Q QSGA+IQ++R + P + R + + G+ D I A
Sbjct: 127 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPDAIATA 186
Query: 98 VDLVIDKLLTELHAEDQADDVGTKTKLRLI------------VPNSSCGSIIGKAGATIK 145
+KL+ E+ AE A+ G+ R + +PN+ G +IGK G TIK
Sbjct: 187 -----EKLINEVLAE--AETGGSGIVARRVAGQAGSDEYVSKIPNNKVGLVIGKGGETIK 239
Query: 146 SFMDDSQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLS-EDTLYS 199
+ + A I++ L D S +R + + GT ++ A +++ +S E+ +
Sbjct: 240 NMQASTGARIQVIPLHLPPGDTS----TERTLKIEGTPEQIESAKQMVNQVISGENRQRN 295
Query: 200 QTMTVPYTYAG 210
+M+ Y+ G
Sbjct: 296 PSMSGGYSQQG 306
>gi|256085349|ref|XP_002578884.1| rna-binding protein related [Schistosoma mansoni]
Length = 821
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 69/125 (55%), Gaps = 6/125 (4%)
Query: 76 FFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQAD-----DVGTKTKLRLIVPN 130
F GTT+R+ +I G+ D ++ + ++D+++ + +V +++++VPN
Sbjct: 11 LFSGTTERVCLIIGSFDGVITVHNYIMDRIMEKPDPNPNTTGEGRLNVERHKQVKILVPN 70
Query: 131 SSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILL 190
S+ G +IGK G+ I+ + + A ++IS+ + L +R + + G LD+ A+ LIL
Sbjct: 71 STAGMVIGKGGSYIQEIKEKTGAYVQISQKSRE-FNLLERCIVVAGELDQTRSAVHLILN 129
Query: 191 KLSED 195
++ D
Sbjct: 130 VIATD 134
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLS-RSHEFFPGTTDRIIMISGT 90
E+ ++ LV N AG VIGKGGS I + + ++GA +Q+S +S EF +R I+++G
Sbjct: 59 ERHKQVKILVPNSTAGMVIGKGGSYIQEIKEKTGAYVQISQKSREF--NLLERCIVVAGE 116
Query: 91 IDEILRAVDLVIDKLLTE 108
+D+ AV L+++ + T+
Sbjct: 117 LDQTRSAVHLILNVIATD 134
>gi|159476646|ref|XP_001696422.1| C1, subunit of the circadian RNA-binding protein CHLAMY 1
[Chlamydomonas reinhardtii]
gi|158282647|gb|EDP08399.1| C1, subunit of the circadian RNA-binding protein CHLAMY 1
[Chlamydomonas reinhardtii]
Length = 511
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G VIG+ G+TI D ++ +G RIQ+ PG D+ + ISG DE+ RA V+D L
Sbjct: 134 GRVIGRAGATIRDLEASTGTRIQVDHK---APG--DKPVTISGRADEVERAKRQVLD--L 186
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
H D A G K L P G +IG+ G TI++ S A I + + +
Sbjct: 187 ISGHGSDAAPAPGEAQKT-LECPQGIVGRVIGRGGETIRTLQQASGAHILV---NQDFPE 242
Query: 167 LNDRLVTLTGTLDEQMRALELI 188
R +T++G+ D RA ++
Sbjct: 243 GAARQITISGSQDAVDRAASMV 264
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ G VIG+GG TI Q SGA I +++ FP R I ISG+ D + RA +V +
Sbjct: 211 IVGRVIGRGGETIRTLQQASGAHILVNQD---FPEGAARQITISGSQDAVDRAASMV-QE 266
Query: 105 LLTELHAEDQA--DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
L+ HA G + L P + G IIGK G TIK A I+I D
Sbjct: 267 LIGGEHANTSQVVQRFGVGSTEVLECPKTMVGRIIGKGGETIKDLQKRFNASIQI---DQ 323
Query: 163 SYYGLNDRLVTLTG---TLDEQMRALELIL 189
S VT+TG T+ RA+E ++
Sbjct: 324 SAMPCK---VTITGPSHTIASARRAIEDLI 350
>gi|356562072|ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 31/205 (15%)
Query: 12 PDVHGKRSTAPVKSLSSDPTEKPT-----------------YIRFLVSNPLAGAVIGKGG 54
P +G S P SS P E PT R +V G++IG+ G
Sbjct: 6 PIQNGVSSDNPAAEPSSTPAEDPTPDPAAAEKRWPGWPGHCVFRLIVPVLKVGSIIGRKG 65
Query: 55 STINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT------IDEILRAVDLVIDKL--L 106
I ++ ARI R + GT+DRI++ISG + + AV V ++
Sbjct: 66 ELIKKTCEETKARI---RVLDGAVGTSDRIVLISGKEEPEAPLSPAMNAVIRVFKRVSGF 122
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHS--Y 164
+E+ AE++A V +RL+V ++ ++IGK G+ IKS +++ A +++ D Y
Sbjct: 123 SEIDAENKASAVAF-CSVRLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGDEVPFY 181
Query: 165 YGLNDRLVTLTGTLDEQMRALELIL 189
++R+V L G + ++ALE ++
Sbjct: 182 AAADERIVELQGEAMKVLKALEAVV 206
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE--FFPGTTDRIIMISGTIDEI 94
+R LV++ A +IGK GS I Q +GA +++ E F+ +RI+ + G ++
Sbjct: 139 VRLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKV 198
Query: 95 LRAVDLVIDKL 105
L+A++ V+ L
Sbjct: 199 LKALEAVVGHL 209
>gi|410970837|ref|XP_003991883.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Felis catus]
Length = 493
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 23/233 (9%)
Query: 7 SYVPSPDV-------------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKG 53
SY+P +V H R SS + +R LV GA+IGK
Sbjct: 90 SYIPDEEVSSPSPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKE 149
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G TI + Q+ +R+ + R G ++ + I T + A ++++ + E
Sbjct: 150 GLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETK 207
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLV 172
A+++ L+++ N G +IGK G +K ++ I IS L D S Y +R +
Sbjct: 208 LAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTI 262
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVP 225
T+ GT++ A I+ KL E + M T++G F S + +G P
Sbjct: 263 TVKGTVEACANAEVEIMKKLRE--AFENDMLAVNTHSGYFSSLYPPHQFGPFP 313
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 214 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAN 273
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----------------------KTKLRLIVPNSSC 133
A ++ KL + A + + + + L +P +
Sbjct: 274 AEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAV 333
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 334 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 391
Query: 194 EDTLYS 199
E+ ++
Sbjct: 392 EENFFN 397
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 324 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 381
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 382 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 438
Query: 157 ISR 159
+ R
Sbjct: 439 VPR 441
>gi|297601352|ref|NP_001050707.2| Os03g0627500 [Oryza sativa Japonica Group]
gi|255674723|dbj|BAF12621.2| Os03g0627500, partial [Oryza sativa Japonica Group]
Length = 512
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
R L+ GA+IG+ G I +S ARI++ + PG +R +MIS DE
Sbjct: 112 FRILIPAQKVGAIIGRKGEFIKKMCEESKARIKIL---DGPPGVPERTVMISAK-DEPDA 167
Query: 97 AVDLVID------KLLTELHAEDQAD---DVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+ +D K +T+ D ++ RL+VP S GS+IGK GATIKS
Sbjct: 168 PISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSI 227
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
D S+++++I +DR+V + G +ALE I L
Sbjct: 228 QDSSKSIVRIVETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 272
>gi|40792684|gb|AAR90343.1| circadian RNA-binding protein CHLAMY 1 subunit C1 [Chlamydomonas
reinhardtii]
Length = 488
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
G VIG+ G+TI D ++ +G RIQ+ PG D+ + ISG DE+ RA V+D L
Sbjct: 111 GRVIGRAGATIRDLEASTGTRIQVDHK---APG--DKPVTISGRADEVERAKRQVLD--L 163
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
H D A G K L P G +IG+ G TI++ S A I + + +
Sbjct: 164 ISGHGSDAAPAPGEAQKT-LECPQGIVGRVIGRGGETIRTLQQASGAHILV---NQDFPE 219
Query: 167 LNDRLVTLTGTLDEQMRALELI 188
R +T++G+ D RA ++
Sbjct: 220 GAARQITISGSQDAVDRAASMV 241
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ G VIG+GG TI Q SGA I +++ FP R I ISG+ D + RA +V +
Sbjct: 188 IVGRVIGRGGETIRTLQQASGAHILVNQD---FPEGAARQITISGSQDAVDRAASMV-QE 243
Query: 105 LLTELHAEDQA--DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
L+ HA G + L P + G IIGK G TIK A I+I D
Sbjct: 244 LIGGEHANTSQVVQRFGVGSTEVLECPKTMVGRIIGKGGETIKDLQKRFNASIQI---DQ 300
Query: 163 SYYGLNDRLVTLTG---TLDEQMRALELIL 189
S VT+TG T+ RA+E ++
Sbjct: 301 SAMPCK---VTITGPSHTIASARRAIEDLI 327
>gi|116787223|gb|ABK24418.1| unknown [Picea sitchensis]
gi|224286491|gb|ACN40952.1| unknown [Picea sitchensis]
Length = 481
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------- 89
R LV + G +IG+ G + ++ +RI++ E GT +R +M+S
Sbjct: 87 FRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKIL---EGLRGTPERTVMVSAKEEPEAP 143
Query: 90 ---TIDEILRAVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIK 145
+D ILR +I+ +A G+ T RL+V + GS+IG+ GATIK
Sbjct: 144 VSPAMDGILRVHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGTQAGSLIGRQGATIK 203
Query: 146 SFMDDSQAVIKI-SRLDHSYYGL-NDRLVTLTGTLDEQMRALELILLKL 192
+ + S A++++ + D + L +DRLV + G +A+ELI+ L
Sbjct: 204 AIQEGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVSHL 252
>gi|356552330|ref|XP_003544521.1| PREDICTED: uncharacterized protein LOC100813135 [Glycine max]
Length = 670
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 18/173 (10%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ + N G +IGKGG TI Q QSGA+IQ++R + P + R + + G+ D I A
Sbjct: 125 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPDAIATA 184
Query: 98 VDLVIDKLLTELH-------AEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
L I+++L E A A G+ + I PN+ G +IGK G TIK+
Sbjct: 185 EKL-INEVLAEAETGGSGIIARRVAGQAGSDEYVSKI-PNNKVGLVIGKGGETIKNMQAS 242
Query: 151 SQAVIKISRL-----DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLY 198
+ A I++ L D S +R + + GT ++ A +++ +S + +
Sbjct: 243 TGARIQVIPLHLPPGDTS----TERTLKIEGTPEQIESAKQMVNQVISGENRH 291
>gi|16924113|gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709929|gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215695360|dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625405|gb|EEE59537.1| hypothetical protein OsJ_11804 [Oryza sativa Japonica Group]
Length = 510
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
R L+ GA+IG+ G I +S ARI++ + PG +R +MIS DE
Sbjct: 110 FRILIPAQKVGAIIGRKGEFIKKMCEESKARIKIL---DGPPGVPERTVMISAK-DEPDA 165
Query: 97 AVDLVID------KLLTELHAEDQAD---DVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
+ +D K +T+ D ++ RL+VP S GS+IGK GATIKS
Sbjct: 166 PISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSI 225
Query: 148 MDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
D S+++++I +DR+V + G +ALE I L
Sbjct: 226 QDSSKSIVRIVETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 270
>gi|332023471|gb|EGI63714.1| Far upstream element-binding protein 1 [Acromyrmex echinatior]
Length = 731
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 36/188 (19%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ LV G VIGKGG I Q++SGA++Q + E PG DR ++SG + +
Sbjct: 300 VEVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREEGPG--DRKCLLSGKHQAVEQ 357
Query: 97 AVDLVIDKLLTELHAEDQADDVG--------------------------------TKTKL 124
A + + + + + +D +++G K +
Sbjct: 358 ARQRIQELIDSVMRRDDGRNNMGGRGSGPRGNGFGGNRNPNEYGTWDRRQGGPMQDKIET 417
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
VP+S CG IIGK G TIK + A ++ R + S N+++ + G ++ A
Sbjct: 418 TFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNE--NEKIFIIRGNPEQVEHA 475
Query: 185 LELILLKL 192
+ KL
Sbjct: 476 KRIFSEKL 483
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 33/183 (18%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR---IQLSRSHEFFPGTTDRIIMISGT 90
P ++ ++ P G +IGKGG TI Q +SGA+ IQ S E ++ + I+G
Sbjct: 193 PGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQE-----QEKPLRITGD 247
Query: 91 IDEILRA----VDLVIDKLLTELH-----AEDQ----ADDVG------TKTKLRLIVPNS 131
++ A +L+ +K + H A D+ ++D G + ++VP +
Sbjct: 248 PQKVEYAKQLVYELIAEKEIQMFHRGGRGATDRTGNYSNDSGFNHGPANSDGVEVLVPRA 307
Query: 132 SCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
+ G +IGK G IK +S A ++ + G DR L+G + +A+E +
Sbjct: 308 AVGVVIGKGGDMIKKIQAESGAKVQFQQGREE--GPGDRKCLLSG----KHQAVEQARQR 361
Query: 192 LSE 194
+ E
Sbjct: 362 IQE 364
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 10 PSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ 69
P+ + G S + SS+P V + + G +IG+GG I Q+++G +IQ
Sbjct: 76 PAGNSIGDSSGQGARPPSSNPLCSMCNEDIRVPDKMVGLIIGRGGEQITRLQTETGCKIQ 135
Query: 70 LSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK------ 123
++ P +R+ ++G+ + + RA +LV+ + +E D + +
Sbjct: 136 MAPESGGLP---ERVCTLTGSREAVNRAKELVLSIVNQRSRSEGIGDMNMSGSGSGMMGH 192
Query: 124 ---LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+ +++P G IIGK G TIK + S A +
Sbjct: 193 PGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKM 227
>gi|360042755|emb|CCD78165.1| putative poly(rc) binding protien [Schistosoma mansoni]
Length = 862
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 13/143 (9%)
Query: 51 GKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-- 108
GK G + ++ +SGARI +S + +RI+ I+GT ++I A L+ K +
Sbjct: 190 GKRGENVRKYREESGARINISDG-----SSPERIVTITGTTEQIYIAFTLMSRKFEDDFT 244
Query: 109 ---LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYY 165
L D+ + T LRL+VP + CGSIIGK G+ IK + + A I+++ +
Sbjct: 245 QGLLRMGDETANCPPVT-LRLLVPVAQCGSIIGKGGSKIKDVRELTGASIQVA--SEALP 301
Query: 166 GLNDRLVTLTGTLDEQMRALELI 188
+R VT++GT D + + L+
Sbjct: 302 TSTERTVTISGTADSISKCIRLL 324
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R LV G++IGKGGS I D + +GA IQ++ E P +T+R + ISGT D
Sbjct: 259 PVTLRLLVPVAQCGSIIGKGGSKIKDVRELTGASIQVAS--EALPTSTERTVTISGTADS 316
Query: 94 ILRAVDLVIDKLL 106
I + + L+ D L
Sbjct: 317 ISKCIRLLCDIFL 329
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 13/110 (11%)
Query: 31 TEKPTYIR-FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
TE+ +R ++SN + G +IG+GG+TIN+ ++ S A+I++S + G +R I +SG
Sbjct: 664 TEESIIVREMIISNDVIGCIIGRGGTTINEIRNASKAQIKISNCED---GAKERKITVSG 720
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDV-------GTKTKLRLIVPNSS 132
+D + A L+ + +H E A +V TK LI+ +SS
Sbjct: 721 KLDSVNLAQFLINSSI--AIHREMWAFNVRLASAATALMTKNSLIINSSS 768
>gi|256073934|ref|XP_002573282.1| poly(rc) binding protien [Schistosoma mansoni]
Length = 862
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 13/143 (9%)
Query: 51 GKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE-- 108
GK G + ++ +SGARI +S + +RI+ I+GT ++I A L+ K +
Sbjct: 190 GKRGENVRKYREESGARINISDG-----SSPERIVTITGTTEQIYIAFTLMSRKFEDDFT 244
Query: 109 ---LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYY 165
L D+ + T LRL+VP + CGSIIGK G+ IK + + A I+++ +
Sbjct: 245 QGLLRMGDETANCPPVT-LRLLVPVAQCGSIIGKGGSKIKDVRELTGASIQVA--SEALP 301
Query: 166 GLNDRLVTLTGTLDEQMRALELI 188
+R VT++GT D + + L+
Sbjct: 302 TSTERTVTISGTADSISKCIRLL 324
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R LV G++IGKGGS I D + +GA IQ++ E P +T+R + ISGT D
Sbjct: 259 PVTLRLLVPVAQCGSIIGKGGSKIKDVRELTGASIQVAS--EALPTSTERTVTISGTADS 316
Query: 94 ILRAVDLVIDKLL 106
I + + L+ D L
Sbjct: 317 ISKCIRLLCDIFL 329
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 13/110 (11%)
Query: 31 TEKPTYIR-FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
TE+ +R ++SN + G +IG+GG+TIN+ ++ S A+I++S + G +R I +SG
Sbjct: 664 TEESIIVREMIISNDVIGCIIGRGGTTINEIRNASKAQIKISNCED---GAKERKITVSG 720
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDV-------GTKTKLRLIVPNSS 132
+D + A L+ + +H E A +V TK LI+ +SS
Sbjct: 721 KLDSVNLAQFLINSSI--AIHREMWAFNVRLASAATALMTKNSLIINSSS 768
>gi|403287927|ref|XP_003935171.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Saimiri boliviensis boliviensis]
Length = 579
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQGSPGSVFKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
GK G +K D+ I IS L +R +T+ G ++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRE 349
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 6/159 (3%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAEA--PDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVP 205
+ +V +TG A I L++ + Q +P
Sbjct: 532 NDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALP 570
>gi|345796407|ref|XP_003434167.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 1 [Canis lupus familiaris]
Length = 488
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 23/233 (9%)
Query: 7 SYVPSPDV-------------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKG 53
SY+P +V H R SS + +R LV GA+IGK
Sbjct: 85 SYIPDEEVSSPTPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKE 144
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G TI + Q+ +R+ + R G ++ + I T + A ++++ + E
Sbjct: 145 GLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETK 202
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLV 172
A+++ L+++ N G +IGK G +K ++ I IS L D S Y +R +
Sbjct: 203 LAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTI 257
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVP 225
T+ GT++ A I+ KL E + M T++G F S + +G P
Sbjct: 258 TVKGTVEACANAEVEIMKKLRE--AFENDMLAVNTHSGYFSSLYPPHQFGPFP 308
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 209 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAN 268
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----------------------KTKLRLIVPNSSC 133
A ++ KL + A + + + + L +P +
Sbjct: 269 AEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAV 328
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 329 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 386
Query: 194 EDTLYS 199
E+ ++
Sbjct: 387 EENFFN 392
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 319 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 376
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 377 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 433
Query: 157 ISR 159
+ R
Sbjct: 434 VPR 436
>gi|212723602|ref|NP_001132277.1| uncharacterized protein LOC100193713 [Zea mays]
gi|194693942|gb|ACF81055.1| unknown [Zea mays]
Length = 510
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI-L 95
IR L ++ L G+VIGK G+ + + Q+GARI++ + G +R+I+IS +EI
Sbjct: 35 IRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASG--ERLIIISS--NEIPA 90
Query: 96 RAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
+ I+ L+ LH + A + RL+VP+S G IIG+ G I + A I
Sbjct: 91 EPISPAIEALIL-LHDKVSAPSEKHHSSTRLVVPSSKVGCIIGEGGKVITDMRRRTGAEI 149
Query: 156 KI-SRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
++ S+ D Y +D LV + G AL I +L TL
Sbjct: 150 RVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLRTRTL 193
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
I + N G+++G GG + + + SGAR++L HE G+++ ++ I GT+D+
Sbjct: 423 IELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRL---HEAHAGSSESVVEIQGTLDQAKA 479
Query: 97 AVDLV 101
A L+
Sbjct: 480 AQSLL 484
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
+ + L +PNSS GSI+G G + S A + RL ++ G ++ +V + GTLD+
Sbjct: 421 STIELRIPNSSLGSIVGAGGVNLAEIRQVSGARL---RLHEAHAGSSESVVEIQGTLDQA 477
Query: 182 MRALELILLKLSEDTLYSQ 200
A L+ +S ++ Q
Sbjct: 478 KAAQSLLQGFISANSRQQQ 496
>gi|18858571|ref|NP_571566.1| insulin-like growth factor 2 mRNA-binding protein 3 [Danio rerio]
gi|82248267|sp|Q9PW80.1|IF2B3_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=Decapentaplegic and Vg-related 1 RNA-binding
protein; AltName: Full=IGF-II mRNA-binding protein 3;
AltName: Full=VICKZ family member 3; AltName: Full=Vg1
RNA-binding protein; Short=Vg1-RBP
gi|5596632|gb|AAD45610.1|AF161270_1 Vg1 RNA binding protein [Danio rerio]
gi|28278436|gb|AAH45873.1| Insulin-like growth factor 2 mRNA binding protein 3 [Danio rerio]
gi|182889884|gb|AAI65768.1| Igf2bp3 protein [Danio rerio]
Length = 582
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 28/280 (10%)
Query: 4 NESSYVPSPDVHGKRSTAP-------VKSLSSDPT-EKPTYIRFLVSNPLAGAVIGKGGS 55
+E++ +P V G+R P SL + P + +R LV GA+IGK G+
Sbjct: 156 DETAAADAPAVGGRRGFNPRGPPRQGSPSLGARPKLQSDVPLRLLVPTQFVGAIIGKEGA 215
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA 115
TI + Q+ ++I + R G ++ I + T + A +++ + E
Sbjct: 216 TIRNITKQTHSKIDIHRKEN--AGAAEKPITVHSTPEGCSSACRNIMEIMQKEAIDTKIT 273
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
+++ L+++ N+ G +IGK G +K D+ I IS L +R +T+
Sbjct: 274 EEI----PLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVK 329
Query: 176 GTLDEQMRALELILLKLSED------TLYSQTMTVPYTYAGVFFSG---FHGMPYGAVPP 226
GTLD +A E I+ K+ E ++ Q+ +P G+ + F G G + P
Sbjct: 330 GTLDACAKAEEEIMKKVRESYENDVAAMHLQSNLIP----GLNLNALGLFPGAASGGISP 385
Query: 227 PVPAVPHNTAAHYGPNMGGRKFQNNKVLLPWPLNPVGMLL 266
V + P A G G + ++ V L P VG ++
Sbjct: 386 SVVSGPP-PGAQAGYQSFGAQMESETVHLFIPALAVGAII 424
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + R+++ISG + +A + KL
Sbjct: 421 GAIIGKQGQHIKQLSRFAGASIKIAPADGI--DAKQRMVIISGPPEAQFKAQGRIFGKLK 478
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
E + G K +++L VP+ + G +IGK G T+ + + A + + R D
Sbjct: 479 EE-------NFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVPR-DQ 530
Query: 163 SYYGLNDRLVTLTG 176
+ + +V +TG
Sbjct: 531 TPDENDQVVVKITG 544
>gi|108709930|gb|ABF97725.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 389
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 79/167 (47%), Gaps = 13/167 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
+ R L+ GA+IG+ G I +S ARI++ + PG +R +MIS DE
Sbjct: 108 SVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKIL---DGPPGVPERTVMISAK-DEP 163
Query: 95 LRAVDLVIDKLLTELHA-EDQAD-DVGTKTK-------LRLIVPNSSCGSIIGKAGATIK 145
+ +D L D +D D G + RL+VP S GS+IGK GATIK
Sbjct: 164 DAPISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIK 223
Query: 146 SFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
S D S+++++I +DR+V + G +ALE I L
Sbjct: 224 SIQDSSKSIVRIVETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 270
>gi|281341834|gb|EFB17418.1| hypothetical protein PANDA_012445 [Ailuropoda melanoleuca]
Length = 320
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G ++ + +SGARI +S + +RII ++G + I +A ++IDKL ++ +
Sbjct: 3 GESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFKAFAMIIDKLEEDISSSM 57
Query: 114 QADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMD-DSQAVIKISRLDHSYYGLNDR 170
++ LRL+VP S CGS+IGK G IK + +Q + L +S +R
Sbjct: 58 TNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIREVGAQVQVAGDMLPNS----TER 113
Query: 171 LVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TYAGVFFSG 215
+T+ G + ++ I + + E + +T+PY + + V F+G
Sbjct: 114 AITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSSSPVIFAG 160
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 304
Query: 89 GTIDEILRAVDLV 101
G+ I A L+
Sbjct: 305 GSAASISLAQYLI 317
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + + GA++Q+ + + P +T+R I
Sbjct: 60 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIR-EVGAQVQV--AGDMLPNSTERAIT 116
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 117 IAGIPQSIIECVKQICVVML 136
>gi|449514357|ref|XP_002192510.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Taeniopygia
guttata]
Length = 434
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 113/266 (42%), Gaps = 40/266 (15%)
Query: 2 ETNESSYVPSPDVHGKRSTAPVKSLS----SDPTEKPTYIRFLVSNPLAGAVIGKGGSTI 57
E E ++ + + +GKR ++ S T++ +R L+ + AGAVIGKGG I
Sbjct: 4 EQQEETFT-NTETNGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNI 62
Query: 58 NDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADD 117
++ A + + S +RI+ IS I+ I + +I L H + D
Sbjct: 63 KALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEYQHYKGSDFD 117
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLT 175
+LRL++ S G IIG GA IK +++Q IK+ + HS DR+V +
Sbjct: 118 C----ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHS----TDRVVLIG 169
Query: 176 GTLDEQMRALELILLKLSEDTLYSQTMTVP-------------YTYAG--VFFSGFHGMP 220
G D + +++IL +SE+ L+ +++ Y Y G + F G P
Sbjct: 170 GKPDRVVECIKIILDLISEECLFVVLVSIKGRAQLMIHFYDETYDYGGFTMMFDDRRGRP 229
Query: 221 YGAVPPPVPAVPHNTAAHYGPNMGGR 246
G P P GGR
Sbjct: 230 VG-----FPMRGRGGFDRMPPGRGGR 250
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A
Sbjct: 364 IPKDLAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNA 417
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 361 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 417
Query: 185 LELI 188
L+
Sbjct: 418 QYLL 421
>gi|302658378|ref|XP_003020893.1| hypothetical protein TRV_04969 [Trichophyton verrucosum HKI 0517]
gi|291184763|gb|EFE40275.1| hypothetical protein TRV_04969 [Trichophyton verrucosum HKI 0517]
Length = 561
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 22/207 (10%)
Query: 7 SYVPSPDVH----GKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQS 62
+Y P + H G RS P + P + N G +IG+ G + ++
Sbjct: 161 AYSPPSNRHYRAGGDRSPPP---RNRGPVSDENNETIEIDNKHVGLIIGRQGENLRRIEN 217
Query: 63 QSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELH-AEDQADDVGTK 121
++GAR+Q S E T R+ +SG I ID++++E + A + +G
Sbjct: 218 ETGARVQFLDSAEHN--KTIRLCRLSGP-KSIRDKAKAEIDRIVSENNQARNDGRPIGQD 274
Query: 122 TK---------LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
+ +++VP+ + G +IG++G T++ + S I I+R S GL R V
Sbjct: 275 GRPVDADGSETTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGL--RPV 332
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYS 199
TLTG+ RA ELIL + DT S
Sbjct: 333 TLTGSQQAIQRAKELILGIVESDTRTS 359
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 16/134 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V + G VIG+ G T+ D +SG RI ++R E G R + ++G+ I RA
Sbjct: 287 KIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGL--RPVTLTGSQQAIQRA 344
Query: 98 VDLVIDKLLTELHAEDQADD--------------VGTKTKLRLIVPNSSCGSIIGKAGAT 143
+L++ + ++ G K ++ +P G +IGK G
Sbjct: 345 KELILGIVESDTRTSGNQGQREPRGQGSGGENGGGGEKLNDKMFIPKEYVGMVIGKGGEA 404
Query: 144 IKSFMDDSQAVIKI 157
I+ S I I
Sbjct: 405 IRELQTLSGCKINI 418
>gi|301759725|ref|XP_002915743.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 556
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 23/233 (9%)
Query: 7 SYVPSPDV-------------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKG 53
SY+P +V H R SS + +R LV GA+IGK
Sbjct: 153 SYIPDEEVSSPSPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKE 212
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G TI + Q+ +R+ + R G ++ + I T + A ++++ + E
Sbjct: 213 GLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETK 270
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLV 172
A+++ L+++ N G +IGK G +K ++ I IS L D S Y +R +
Sbjct: 271 LAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTI 325
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVP 225
T+ GT++ A I+ KL E + M T++G F S + +G P
Sbjct: 326 TVKGTVEACANAEVEIMKKLRE--AFENDMLAVNTHSGYFSSLYPPHQFGPFP 376
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAN 336
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----------------------KTKLRLIVPNSSC 133
A ++ KL + A + + + + L +P +
Sbjct: 337 AEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>gi|332215033|ref|XP_003256641.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Nomascus leucogenys]
gi|397470079|ref|XP_003806661.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Pan paniscus]
gi|179479950|gb|ACB86627.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 493
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 190
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 191 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 246
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 247 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 303
Query: 216 FHGMPYGAVP 225
+ +G P
Sbjct: 304 YPHHQFGPFP 313
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 27/187 (14%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT+ E
Sbjct: 214 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTV-EACA 272
Query: 97 AVDLVIDKLLTELHAED------------------------QADDVGTKTKLRLIVPNSS 132
+ ++ I K L E D + + L +P +
Sbjct: 273 SAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQA 332
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 333 VGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKL 390
Query: 193 SEDTLYS 199
E+ ++
Sbjct: 391 KEENFFN 397
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 324 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 381
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 382 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 438
Query: 157 ISR 159
+ R
Sbjct: 439 VPR 441
>gi|355755956|gb|EHH59703.1| hypothetical protein EGM_09883, partial [Macaca fascicularis]
Length = 132
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 14/129 (10%)
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRL 126
GTT+R+ ++ GT E L AV I + + E+ A + + V + +L
Sbjct: 1 GTTERVCLVQGTA-EALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKL 59
Query: 127 IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALE 186
IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+
Sbjct: 60 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVS 118
Query: 187 LILLKLSED 195
I+ K+ ED
Sbjct: 119 AIVQKVQED 127
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V N AG +IGKGG+T+ QSGA +QLS+ E +R++ +SG +++ +A
Sbjct: 58 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEPEQVHKA 116
Query: 98 VDLVIDKL 105
V ++ K+
Sbjct: 117 VSAIVQKV 124
>gi|68475799|ref|XP_718106.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|68475932|ref|XP_718039.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439785|gb|EAK99099.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439861|gb|EAK99174.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|238882982|gb|EEQ46620.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 529
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 19/189 (10%)
Query: 1 METNESSYVPSPDVHGKRSTA-------PVKSLSSDPTEKPTYIRFLVSNPL--AGAVIG 51
ET E +Y PS H PV + + PT+I+ + P+ A ++G
Sbjct: 119 QETLEPAYAPSESDHADDQNTGSSSSSKPVSNHRD--RDDPTFIQLRMYCPVKEASTIVG 176
Query: 52 KGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHA 111
+ G TIN + ++ RI +S E G +RI+ + G + + RA L+ +L E
Sbjct: 177 RKGETINHLREKANVRITVS---ENLKGVPERIVAVKGPAENVARAFGLITRVILEE--P 231
Query: 112 EDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDR 170
ED+ + ++ L+L++P+ G IIGK G + ++S A +K + Y DR
Sbjct: 232 EDEPASINSQQYNLKLLIPHPMIGFIIGKQGLKFREIEENSAAKLKAAENALPYS--TDR 289
Query: 171 LVTLTGTLD 179
++++ G D
Sbjct: 290 VLSVMGVGD 298
>gi|119583084|gb|EAW62680.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_f [Homo
sapiens]
Length = 440
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 40/245 (16%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAE 112
GG I ++ A + + S +RI+ IS I+ I + +I L H +
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEYQHYK 115
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDR 170
D +LRL++ S G IIG GA IK +++Q IK+ + HS DR
Sbjct: 116 GSDFDC----ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHS----TDR 167
Query: 171 LVTLTGTLDEQMRALELILLKLSED-----------TLYSQTMTVPYTYAG--VFFSGFH 217
+V + G D + +++IL +SE Y +T Y Y G + F
Sbjct: 168 VVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDET----YDYGGFTMMFDDRR 223
Query: 218 GMPYG 222
G P G
Sbjct: 224 GRPVG 228
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 7 SYVPSPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGA 66
+Y P + H S A + D + + LAG++IGKGG I + +SGA
Sbjct: 336 AYEPQVEYHSYYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGA 395
Query: 67 RIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
I++ E G+ DRII I+GT D+I A
Sbjct: 396 SIKID---EPLEGSEDRIITITGTQDQIQNA 423
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 367 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 423
Query: 185 LELI 188
L+
Sbjct: 424 QYLL 427
>gi|148223980|ref|NP_001082843.1| uncharacterized protein LOC557028 [Danio rerio]
gi|94732695|emb|CAK10813.1| novel protein similar to human IGF-II mRNA-binding protein 2
(IMP-2) [Danio rerio]
gi|167614340|gb|ABZ89742.1| IGF-II mRNA-binding protein 2b variant 1 [Danio rerio]
gi|167614342|gb|ABZ89743.1| IGF-II mRNA-binding protein 2b variant 2 [Danio rerio]
Length = 436
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 22/222 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +++ + R G T++ I I + + +
Sbjct: 31 LRILVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKEN--AGATEKAITIHSSKEGCSQ 88
Query: 97 AVDLVIDKLLTELHAEDQADD--VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++++ + E +A+D + + L+++ NS G +IGK G +K D+
Sbjct: 89 ACRMILEIM------EKEANDTKIVEEVPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTK 142
Query: 155 IKISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------DTLYSQTMTVP-- 205
I IS L D + Y +R +++ G ++E +A I+ KL E ++ QT +
Sbjct: 143 ITISALQDLTVYN-QERTISVRGGVEECCKAEGEIMKKLREAHENDVASVNQQTNMMAGL 201
Query: 206 -YTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPN-MGG 245
+ G+F SG +P + + P N + GP+ MGG
Sbjct: 202 NLSALGIFSSGMSVLPPASGLRGSLSTPANYSPLLGPSIMGG 243
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 13/171 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + P GA+IGK G I + +GA I+++ P +R+++I+G + +
Sbjct: 265 VYLFIPTPAVGALIGKKGQHIKELAHFAGASIKIAAPES--PDEPERMVIITGPPEAQFK 322
Query: 97 AVDLVIDKLLTE--LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A + KL E A+++ K + + VP+++ G +IGK G T+ + + A
Sbjct: 323 AQGRIYGKLKEENFFTAKEE-----VKLEAHIKVPSTAAGRVIGKGGKTVNELQNLTSAE 377
Query: 155 IKISRLDHSYYGLNDRLVTLTGTL---DEQMRALELILLKLSEDTLYSQTM 202
+ + R D + +D V + G R + I+ ++ + Q M
Sbjct: 378 VIVPR-DQTPDENDDVFVKIIGHFFASQTAQRKIREIVQQVKQQERKHQQM 427
>gi|297600140|ref|NP_001048558.2| Os02g0822300 [Oryza sativa Japonica Group]
gi|255671363|dbj|BAF10472.2| Os02g0822300, partial [Oryza sativa Japonica Group]
Length = 156
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 187 LILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVPPPVPAVPHNTAAHYGPNMGGR 246
LIL KLSED Y ++ P+ YAG+ F + G+P G + +P VP+N A +YGPN G
Sbjct: 3 LILSKLSEDVHYPPNLSSPFPYAGLGFPSYPGVPVGYM---IPQVPYNNAVNYGPNGYGG 59
Query: 247 KFQNNKVLLP 256
++QNNK P
Sbjct: 60 RYQNNKPSTP 69
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKL 105
GAV+G+ G I + SGARI++S +F GT++R + I+GT + I A +++ ++
Sbjct: 92 GAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAAESMIMQRV 150
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+ L + + + G+++G+AG I + S A IKIS G ++R VT+TGT +
Sbjct: 78 AQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSE 137
Query: 180 EQMRALELILLKLSEDT 196
A +I+ +++ +
Sbjct: 138 AIQAAESMIMQRVTASS 154
>gi|427784321|gb|JAA57612.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Rhipicephalus
pulchellus]
Length = 334
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 9/159 (5%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
AP K + + +RFL+ + AGA+IGKGGS IN + + A I + PG
Sbjct: 24 APSKRPRNTGGGRAVDVRFLLQSRNAGAIIGKGGSNINSLRKEFKASISVPDC----PG- 78
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL--LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
+RI+ I +D + + +I KL + A+ + G+++++RL++ S G IIG
Sbjct: 79 PERILSIVADLDTLGEILLNIIPKLDDRSMQFAQHTGQNGGSESEMRLLMHQSHAGCIIG 138
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
+AG IK + + A IK+ G +R+V +TG+
Sbjct: 139 RAGCRIKELRESTGANIKVH--GSCCPGSTERIVKVTGS 175
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
+ +R L+ AG +IG+ G I + + +GA I++ S PG+T+RI+ ++G+ +
Sbjct: 122 SEMRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVHGS--CCPGSTERIVKVTGSPSVV 179
Query: 95 LRAVDLVID 103
+ + + D
Sbjct: 180 VDCIKQICD 188
>gi|74225344|dbj|BAE31602.1| unnamed protein product [Mus musculus]
Length = 459
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 111/269 (41%), Gaps = 45/269 (16%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGERPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAE 112
GG I ++ A + + S +RI+ IS I+ I + +I L H +
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEYQHYK 115
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDR 170
D +LRL++ S G IIG GA IK +++Q IK+ + HS DR
Sbjct: 116 GSDFDC----ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHS----TDR 167
Query: 171 LVTLTGTLDEQMRALELILLKLSED-----------TLYSQTMTVPYTYAG--VFFSGFH 217
+V + G D + +++IL +SE Y +T Y Y G + F
Sbjct: 168 VVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDET----YDYGGFTMMFDDRR 223
Query: 218 GMPYGAVPPPVPAVPHNTAAHYGPNMGGR 246
G P G P P GGR
Sbjct: 224 GRPVG-----FPMRGRGGFDRMPPGRGGR 247
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLV 101
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A L+
Sbjct: 374 LAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNAQYLL 427
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 367 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 423
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFF 213
L+ ++++ S M + FF
Sbjct: 424 QYLL-----QNSVKSMQMLKDFNARYFFF 447
>gi|115475229|ref|NP_001061211.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|38636959|dbj|BAD03220.1| putative KH domain protein [Oryza sativa Japonica Group]
gi|113623180|dbj|BAF23125.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|215695475|dbj|BAG90642.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 441
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L G VIGKGG TI + +SGARI + S + I T D
Sbjct: 124 LRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDAKSA 183
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
AV+ V+ L DD K LRL+VP G +IGK G+ + ++A I
Sbjct: 184 AVEAVL------LLQSKINDDNEGKMNLRLLVPGKVIGCLIGKGGSIVNDMRSKTKAAIY 237
Query: 157 ISRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
IS+ + +D LV + G ++ AL I+L+L +D L
Sbjct: 238 ISKGEKPRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVL 279
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 23 VKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE-FFPGTT 81
++S +D E +R LV + G +IGKGGS +ND +S++ A I +S+ + ++
Sbjct: 191 LQSKINDDNEGKMNLRLLVPGKVIGCLIGKGGSIVNDMRSKTKAAIYISKGEKPRKASSS 250
Query: 82 DRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIV 128
D ++ + G ++ + A+ ++ +L ++ D D ++ +L V
Sbjct: 251 DELVEVFGEVENLRDALVQIVLRLRDDV-LRDSVDRQNSEKDGKLTV 296
>gi|332242549|ref|XP_003270447.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Nomascus leucogenys]
Length = 579
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 21/205 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 251
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 252 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED------TLYSQTMTVP---YT 207
IS L +R +T+ G+++ +A E I+ K+ E ++ QT +P
Sbjct: 312 ISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASMNVQTHLIPGLNLN 371
Query: 208 YAGVFFSGFHGMPYGAVPPPVPAVP 232
G+F P +PPP P
Sbjct: 372 DLGLF------PPTSGMPPPTSGPP 390
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|401405022|ref|XP_003881961.1| putative KH domain-containing protein [Neospora caninum Liverpool]
gi|325116375|emb|CBZ51928.1| putative KH domain-containing protein [Neospora caninum Liverpool]
Length = 1073
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT-DRIIMISGT 90
E +++ L+ N LA A+IG+ + I Q+ ++ + FPG DRI+M++G+
Sbjct: 706 EGTCFMKLLIDNGLANALIGENSANIQQLSEQTKCNMKFADPENVFPGCQGDRILMMAGS 765
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
D + A VI+K E+H D + K +I+P + C +I+G G I+ D
Sbjct: 766 GDAMNAATIAVIEK-CKEVHPNLSYDQMYGK----VIIPQTCCSAIVGHGGLKIREIRDG 820
Query: 151 SQAVIKISRLDHSYYGL--NDRLVTLTG 176
+ ++R++ S G+ ++RLVT+ G
Sbjct: 821 T-----MTRVEISKKGIMTSERLVTIFG 843
>gi|291240053|ref|XP_002739934.1| PREDICTED: far upstream element-binding protein-like [Saccoglossus
kowalevskii]
Length = 767
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
+ V + L G VIG+GG I Q++SG +IQ+++ P DR+ ++G I RA
Sbjct: 129 YAVPDKLVGLVIGRGGEQITRLQAESGCKIQIAQDSGGLP---DRMCTLTGNPQAIERAK 185
Query: 99 DLVIDKLLTELHAEDQADDVG---TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
L ID+++ D G T + L++P++ G +IGK G IK + +A +
Sbjct: 186 AL-IDRIIERGQGPAVGSDGGLGDGNTTIELMIPSNKVGLVIGKGGEMIKKLQE--RAGV 242
Query: 156 KISRL-DHSYYGLNDRLVTLTGTLDEQMRALELI 188
K+ + D + G +D+ + ++G + A EL+
Sbjct: 243 KMVMIQDATTSGTSDKPLRVSGDPQKCKHARELV 276
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 48/189 (25%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
RF V G VIG+GG I Q+++GARIQ P +R+ +ISG+ D+I A
Sbjct: 338 RFAV-----GIVIGRGGDMIKKIQNETGARIQFRPDDGHSP---ERLAVISGSDDKIDHA 389
Query: 98 VDLVIDKLLTELHAEDQA---------------------------------DDVGTKTKL 124
+ ID+L+ +D+ D + + T
Sbjct: 390 REK-IDELIDSARQKDEQRRQGGGRDRGFGPPPHREGGRGGGGGGFRGGPPDRMDSTT-- 446
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
VP+S CG +IGK G TI++ S A +++SR + +++ T+ G+ + A
Sbjct: 447 -FTVPSSKCGLVIGKGGETIRNINMQSGAHVELSR---NLGPPGEKVFTIRGSPQQISCA 502
Query: 185 LELILLKLS 193
+LI K+S
Sbjct: 503 QQLIHEKVS 511
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P ++ F V + G VIGKGG TI + QSGA ++LSR+ P +++ I G
Sbjct: 438 PPDRMDSTTFTVPSSKCGLVIGKGGETIRNINMQSGAHVELSRN--LGP-PGEKVFTIRG 494
Query: 90 TIDEILRAVDLVIDKL 105
+ +I A L+ +K+
Sbjct: 495 SPQQISCAQQLIHEKV 510
>gi|296491333|tpg|DAA33396.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 2
[Bos taurus]
Length = 556
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 23/233 (9%)
Query: 7 SYVPSPDV-------------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKG 53
SY+P +V H R SS + +R LV GA+IGK
Sbjct: 153 SYIPDEEVSSPSPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKE 212
Query: 54 GSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAED 113
G TI + Q+ +R+ + R G ++ + I T + A ++++ + E
Sbjct: 213 GLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETK 270
Query: 114 QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLV 172
A+++ L+++ N G +IGK G +K ++ I IS L D S Y +R +
Sbjct: 271 LAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTI 325
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGFHGMPYGAVP 225
T+ GT++ A I+ KL E + M T++G F S + +G P
Sbjct: 326 TVKGTVEACANAEIEIMKKLRE--AFENDMLAVNTHSGYFSSLYPPHQFGPFP 376
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAN 336
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----------------------KTKLRLIVPNSSC 133
A ++ KL + A + + + + L +P +
Sbjct: 337 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>gi|432881653|ref|XP_004073885.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like isoform 1 [Oryzias latipes]
Length = 585
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 124/281 (44%), Gaps = 31/281 (11%)
Query: 4 NESSYVPSPDVHGKR---STAPVKSLSSDPTEKPTY-----IRFLVSNPLAGAVIGKGGS 55
+E++ P V G+R + P +S S +P +R LV GA+IGK G+
Sbjct: 156 DETAAPEGPGVGGRRGFNARGPPRSGSPGMGARPKVQSDIPLRVLVPTQFVGAIIGKEGA 215
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA 115
TI + Q+ ++I + R G ++ I I T + +A +++ + E
Sbjct: 216 TIRNITKQTHSKIDIHRKEN--AGAAEKPITIHSTPEGCSKACTTIMEIMQKEALDTKFT 273
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
+++ L+++ N+ G +IGK G +K D+ I IS L +R +T+
Sbjct: 274 EEI----PLKILAHNNFVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTLYNPERTITVK 329
Query: 176 GTLDEQMRALELILLKLSE------DTLYSQTMTVP---YTYAGVFFSGFHGM-PYGAVP 225
G+++ RA E ++ K+ E + Q+ +P G+F SG GM P +
Sbjct: 330 GSIEACSRAEEEVMKKVREAYESDMAAMNLQSNLIPGLNLNALGLFPSGTPGMGPSMSNF 389
Query: 226 PPVPAVPHNTAAHYGPNMGGRKFQNNKVLLPWPLNPVGMLL 266
PP + AH G + G + ++ V L P VG ++
Sbjct: 390 PP-------SGAHGGCSSFGGQPESETVHLFIPALAVGAII 423
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + R+++I G + +A + KL
Sbjct: 420 GAIIGKQGQHIKQLSHFAGASIKIAPAEGM--DAKQRMVIIVGPPEAQFKAQCRIFGKLK 477
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
E + G K +++L VP+ + G +IGK G T+ + + A + + R
Sbjct: 478 EE-------NFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEVVVPR 527
>gi|74198765|dbj|BAE30613.1| unnamed protein product [Mus musculus]
Length = 450
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 111/269 (41%), Gaps = 45/269 (16%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGERPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAE 112
GG I ++ A + + S +RI+ IS I+ I + +I L H +
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEYQHYK 115
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDR 170
D +LRL++ S G IIG GA IK +++Q IK+ + HS DR
Sbjct: 116 GSDFDC----ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHS----TDR 167
Query: 171 LVTLTGTLDEQMRALELILLKLSED-----------TLYSQTMTVPYTYAG--VFFSGFH 217
+V + G D + +++IL +SE Y +T Y Y G + F
Sbjct: 168 VVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDET----YDYGGFTMMFDDRR 223
Query: 218 GMPYGAVPPPVPAVPHNTAAHYGPNMGGR 246
G P G P P GGR
Sbjct: 224 GRPVG-----FPMRGRGGFDRMPPGRGGR 247
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A
Sbjct: 374 LAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNA 423
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 367 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 423
Query: 185 LELI 188
L+
Sbjct: 424 QYLL 427
>gi|344251660|gb|EGW07764.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Cricetulus
griseus]
Length = 393
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 87 RQASPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN-- 142
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + + L+++ N+ G +I
Sbjct: 143 TGAAEKPITILSTPE----GASAACKSILEIMHKEAQDTKLTEEVPLKILAHNNFVGRLI 198
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
GK G +K D+ I IS L +R +T+ G ++ RA E I+ K+ E
Sbjct: 199 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCARAEEEIMKKIRE 255
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N G +IGK G + + + +I +S E +R I + G ++ R
Sbjct: 185 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAR 244
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK-LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A + ++ K+ E + D A ++T+ + L +P S G+IIGK G IK + A I
Sbjct: 245 AEEEIMKKI-RESYENDIASMNQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASI 303
Query: 156 KISR 159
K+S+
Sbjct: 304 KLSQ 307
>gi|299116281|emb|CBN76089.1| poly(rc) binding protien (Partial) [Ectocarpus siliculosus]
Length = 334
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 17/142 (11%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG-TTDRIIMISGTIDE 93
T R L+ N GAVIGKGG+ I + SGA++ +S S G + DR++ +GT +
Sbjct: 101 TVSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHGDSDDRMVTAAGTFN- 159
Query: 94 ILRAVDLVIDKLLTELHA-EDQADDV---------GTKTKLRLIVPNSSCGSIIGKAGAT 143
+V L +L+ A AD V RL++PN G +IG+ G T
Sbjct: 160 ---SVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCT 216
Query: 144 IKSFMDDSQAVIKISRLDHSYY 165
IK+ + S A I+IS H+++
Sbjct: 217 IKAIREQSGARIEIS--SHAFH 236
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 22 PVKSLSS-DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
PV L+ DP R L+ N AG +IG+GG TI + QSGARI++S SH F
Sbjct: 181 PVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEIS-SHAF 235
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 122 TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG-LNDRLVTLTGTLDE 180
T R+++PN G++IGK GA IK + S A + IS +G +DR+VT GT +
Sbjct: 101 TVSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHGDSDDRMVTAAGTFNS 160
Query: 181 QMRALELIL 189
A IL
Sbjct: 161 VQLAFTHIL 169
>gi|296418898|ref|XP_002839062.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635056|emb|CAZ83253.1| unnamed protein product [Tuber melanosporum]
Length = 354
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R ++++ A VIGKGG + + + A+ +S ++ G +RI+ +SG +D + +
Sbjct: 1 MRAVITSAEAATVIGKGGENVTQIRRMAEAKCTVS---DYQRGAGERILTVSGAVDAVAK 57
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKT-KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A L+I L E ++A +KT LRL+VP+ GSIIGK+G I+ + S A +
Sbjct: 58 AFGLIIRTLNNE--PLEEASSPQSKTYPLRLLVPHILIGSIIGKSGGRIREIQEASGARL 115
Query: 156 KIS 158
S
Sbjct: 116 NAS 118
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
+S P K +R LV + L G++IGK G I + Q SGAR+ S S P +T+R ++
Sbjct: 74 ASSPQSKTYPLRLLVPHILIGSIIGKSGGRIREIQEASGARLNASGS--CLPLSTERSLV 131
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
+ G D + A + + L+ +L
Sbjct: 132 VLGVADAVHIATYYIANTLVEQL 154
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYYGLNDRLVTLTGTLDEQMR 183
++ +PN G+IIGK GA I S +VIKI+ D+S N+RLVT+TGT +
Sbjct: 283 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNS----NERLVTITGTQECNQM 338
Query: 184 ALELILLKLSED 195
AL ++ +L +
Sbjct: 339 ALYMLYSRLESE 350
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 33 KPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID 92
+P + + N + GA+IGKGG+ IN+ + SG+ I+++ + + +R++ I+GT +
Sbjct: 278 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD---NSNERLVTITGTQE 334
Query: 93 EILRAVDLVIDKLLTELH 110
A+ ++ +L +E H
Sbjct: 335 CNQMALYMLYSRLESEKH 352
>gi|348564372|ref|XP_003467979.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cavia porcellus]
Length = 741
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 344 RQGSPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 400
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 401 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 455
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
GK G +K D+ I IS L +R +T+ G+++ +A E I+ K+ E
Sbjct: 456 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRE 512
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 580 GAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKIK 637
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 638 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 693
Query: 167 LNDRLVTLTG---TLDEQMRALELILLKLSE 194
+ +V +TG R ++ IL ++ +
Sbjct: 694 NDQVVVKITGHFYACQVAQRKIQEILTQVKQ 724
>gi|332236655|ref|XP_003267515.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Nomascus leucogenys]
gi|332832094|ref|XP_001154460.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 8 [Pan
troglodytes]
gi|338719652|ref|XP_003364039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Equus
caballus]
gi|397475607|ref|XP_003809225.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5 [Pan
paniscus]
gi|402897763|ref|XP_003911914.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 6
[Papio anubis]
gi|410978219|ref|XP_003995493.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Felis catus]
gi|426362137|ref|XP_004048237.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Gorilla gorilla gorilla]
gi|26341878|dbj|BAC34601.1| unnamed protein product [Mus musculus]
gi|26353476|dbj|BAC40368.1| unnamed protein product [Mus musculus]
gi|194374597|dbj|BAG62413.1| unnamed protein product [Homo sapiens]
Length = 439
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 40/245 (16%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAE 112
GG I ++ A + + S +RI+ IS I+ I + +I L H +
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEYQHYK 115
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDR 170
D +LRL++ S G IIG GA IK +++Q IK+ + HS DR
Sbjct: 116 GSDFDC----ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHS----TDR 167
Query: 171 LVTLTGTLDEQMRALELILLKLSED-----------TLYSQTMTVPYTYAG--VFFSGFH 217
+V + G D + +++IL +SE Y +T Y Y G + F
Sbjct: 168 VVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDET----YDYGGFTMMFDDRR 223
Query: 218 GMPYG 222
G P G
Sbjct: 224 GRPVG 228
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLV 101
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A L+
Sbjct: 374 LAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNAQYLL 427
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 367 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 423
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFF 213
L+ + + Y+G FF
Sbjct: 424 QYLLQNSVKQ-------------YSGKFF 439
>gi|312085525|ref|XP_003144713.1| hypothetical protein LOAG_09137 [Loa loa]
Length = 327
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 94/187 (50%), Gaps = 17/187 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV++ AGA+IGK G ++ + Q++ A + + S T +R++ + T++ ++R
Sbjct: 42 LRLLVTSRGAGAIIGKKGESVKNIQAECDATVSVPDSQ-----TPERVVQLVATVENVVR 96
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
V+++I + + E+H D+ ++L+++V S G++IG+ G+ IK +++ +K
Sbjct: 97 CVEMIIAR-IDEVH-----DNQDRDSELKVLVHQSHAGAVIGRGGSRIKELREENGVDLK 150
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSGF 216
+ +R++ + G ++ + L I+ L E + + Y +FF
Sbjct: 151 V--YSECCPQSTERIIQINGKPEKIVACLVTIISTLKEIPIKGPSR----PYESIFFDPV 204
Query: 217 HGMPYGA 223
YG
Sbjct: 205 VANEYGG 211
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D ++ + ++ LV AGAVIG+GGS I + + ++G + L E P +T+RII I+
Sbjct: 110 DNQDRDSELKVLVHQSHAGAVIGRGGSRIKELREENG--VDLKVYSECCPQSTERIIQIN 167
Query: 89 GTIDEILRAVDLVIDKL 105
G ++I+ + +I L
Sbjct: 168 GKPEKIVACLVTIISTL 184
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K +LRL+V + G+IIGK G ++K+ + A + + +R+V L T++
Sbjct: 39 KYELRLLVTSRGAGAIIGKKGESVKNIQAECDATVSVPDSQTP-----ERVVQLVATVEN 93
Query: 181 QMRALELILLKLSE 194
+R +E+I+ ++ E
Sbjct: 94 VVRCVEMIIARIDE 107
>gi|354500002|ref|XP_003512092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Cricetulus griseus]
Length = 440
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 40/245 (16%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAE 112
GG I ++ A + + S +RI+ IS I+ I + +I L H +
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEYQHYK 115
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDR 170
D +LRL++ S G IIG GA IK +++Q IK+ + HS DR
Sbjct: 116 GSDFDC----ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHS----TDR 167
Query: 171 LVTLTGTLDEQMRALELILLKLSED-----------TLYSQTMTVPYTYAG--VFFSGFH 217
+V + G D + +++IL +SE Y +T Y Y G + F
Sbjct: 168 VVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDET----YDYGGFTMMFDDRR 223
Query: 218 GMPYG 222
G P G
Sbjct: 224 GRPVG 228
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A
Sbjct: 374 LAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNA 423
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 367 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 423
Query: 185 LELI 188
L+
Sbjct: 424 QYLL 427
>gi|354500004|ref|XP_003512093.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 4
[Cricetulus griseus]
Length = 439
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 40/245 (16%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAE 112
GG I ++ A + + S +RI+ IS I+ I + +I L H +
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEYQHYK 115
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDR 170
D +LRL++ S G IIG GA IK +++Q IK+ + HS DR
Sbjct: 116 GSDFDC----ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHS----TDR 167
Query: 171 LVTLTGTLDEQMRALELILLKLSED-----------TLYSQTMTVPYTYAG--VFFSGFH 217
+V + G D + +++IL +SE Y +T Y Y G + F
Sbjct: 168 VVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDET----YDYGGFTMMFDDRR 223
Query: 218 GMPYG 222
G P G
Sbjct: 224 GRPVG 228
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLV 101
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A L+
Sbjct: 374 LAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNAQYLL 427
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 367 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 423
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFF 213
L+ + + Y+G FF
Sbjct: 424 QYLLQNSVKQ-------------YSGKFF 439
>gi|168018585|ref|XP_001761826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686881|gb|EDQ73267.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 355
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 17/170 (10%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG-------- 89
R +V G +IG+ G + ++ +RI++ E PGT +RI+M+S
Sbjct: 13 RLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKIL---EGVPGTAERIVMVSAREDPEAAI 69
Query: 90 --TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
++ +LR VI+ E A+ + G RL+V + GS+IG+ GATIKS
Sbjct: 70 SPAMEGLLRVHRRVIEGAEPE-SADAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSI 128
Query: 148 MDDSQAVIKI--SRLDHSYYGL-NDRLVTLTGTLDEQMRALELILLKLSE 194
D S A +++ + + L +DR+V +TG RA EL++ L +
Sbjct: 129 QDSSGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHLRK 178
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT---DRIIM 86
P P R LV+ AG++IG+ G+TI Q SGA +++ + E P DR++
Sbjct: 98 PGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDSSGATVRVLPAAEELPLCALADDRVVE 157
Query: 87 ISGTIDEILRAVDLVIDKL 105
++G + RA +LV+ L
Sbjct: 158 VTGEPRNVQRATELVVAHL 176
>gi|326530414|dbj|BAJ97633.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT------ 90
IR L ++ L G VIG+ G+ + + Q+GARI + H+ G +R+I+IS
Sbjct: 69 IRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASG--ERLIVISSKEIPADP 126
Query: 91 IDEILRAVDLVIDKLLTELHAEDQADDVGTKTKL--RLIVPNSSCGSIIGKAGATIKSFM 148
+ + A+ L+ K+ +E + + KL RL+VP+ G I+G+ G I
Sbjct: 127 VSPTIEALILLHSKVSASKVSEPSESEPSGEHKLVTRLVVPSKKVGCILGEGGKVITEMR 186
Query: 149 DDSQAVIKI-SRLDH-SYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
A I++ S+ D Y N+ LV ++G+ D AL I +L + L
Sbjct: 187 RRIGAEIRVYSKADKPKYLSFNEELVQVSGSPDIAREALTEIASRLRDRIL 237
>gi|170592745|ref|XP_001901125.1| KH domain containing protein [Brugia malayi]
gi|158591192|gb|EDP29805.1| KH domain containing protein [Brugia malayi]
Length = 354
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 113/235 (48%), Gaps = 42/235 (17%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV++ AGA+IGK G ++ + Q++ A + + S T +R++ + ++ +++
Sbjct: 69 LRLLVTSRGAGAIIGKKGESVKNIQTECDATVSVPDSQ-----TPERVVQLVAAVENVVK 123
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
V+++I + + E+H D+ ++L+++V S G++IG+ G+ IK +++ +K
Sbjct: 124 CVEMIIAR-IDEVH-----DNQNRDSELKVLVHQSHAGAVIGRGGSRIKELREENGVDLK 177
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE----------DTLYSQTMTVPY 206
+ +R++ + G ++ + L I+ L E ++++ M V
Sbjct: 178 V--YSECCPQSTERIIQINGKPEKIVACLVTIINTLKEIPIKGPSRPYESIFFDPM-VAN 234
Query: 207 TYAGVFFSGFHG--------------MP-YGAVPPPVPAVPHNTAAHYGPN-MGG 245
Y G ++G H +P YG+VPP P TA PN +GG
Sbjct: 235 EYGG--YAGDHSGRGIRGYGPRGRIPLPSYGSVPPAYDDGPLETAQVTVPNELGG 287
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + ++ LV AGAVIG+GGS I + + ++G + L E P +T+RII I+
Sbjct: 137 DNQNRDSELKVLVHQSHAGAVIGRGGSRIKELREENG--VDLKVYSECCPQSTERIIQIN 194
Query: 89 GTIDEILRAVDLVIDKL 105
G ++I+ + +I+ L
Sbjct: 195 GKPEKIVACLVTIINTL 211
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K +LRL+V + G+IIGK G ++K+ + A + + +R+V L ++
Sbjct: 66 KYELRLLVTSRGAGAIIGKKGESVKNIQTECDATVSVPDSQTP-----ERVVQLVAAVEN 120
Query: 181 QMRALELILLKLSE 194
++ +E+I+ ++ E
Sbjct: 121 VVKCVEMIIARIDE 134
>gi|332215031|ref|XP_003256640.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Nomascus leucogenys]
Length = 556
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 366
Query: 216 FHGMPYGAVP 225
+ +G P
Sbjct: 367 YPHHQFGPFP 376
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----------------------KTKLRLIVPNSSC 133
A ++ KL + A + + + + L +P +
Sbjct: 337 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>gi|326480928|gb|EGE04938.1| KH domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 563
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N G +IG+ G + ++++GAR+Q S E T R+ +SG I
Sbjct: 196 IDNKHVGLIIGRQGENLRRIENETGARVQFLDSAEHN--KTIRLCRLSGP-KSIRDKAKA 252
Query: 101 VIDKLLTELHA----------EDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
ID++++E + + + D +++VP+ + G +IG++G T++ +
Sbjct: 253 EIDRIVSENNQARNDGRPSGQDGRPGDADGSETTKIMVPDRTVGLVIGRSGETVRDLAER 312
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
S I I+R S GL R VTLTG+ RA ELIL + DT S
Sbjct: 313 SGCRINIARDGESINGL--RPVTLTGSQQAIQRAKELILGIVESDTRTS 359
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V + G VIG+ G T+ D +SG RI ++R E G R + ++G+ I RA
Sbjct: 287 KIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGL--RPVTLTGSQQAIQRA 344
Query: 98 VDLVIDKLLTELHAEDQADD--------------VGTKTKLRLIVPNSSCGSIIGKAGAT 143
+L++ + ++ G K ++ +P G +IGK G T
Sbjct: 345 KELILGIVESDTRTSGNQGQREPRGQGSGGENGGGGEKLNDKMFIPKEYVGMVIGKGGET 404
Query: 144 IKSFMDDSQAVIKI 157
I+ S I I
Sbjct: 405 IRELQTLSGCKINI 418
>gi|62088704|dbj|BAD92799.1| heterogeneous nuclear ribonucleoprotein K isoform a variant [Homo
sapiens]
Length = 442
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 40/245 (16%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 3 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 62
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAE 112
GG I ++ A + + S +RI+ IS I+ I + +I L H +
Sbjct: 63 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEYQHYK 117
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDR 170
D +LRL++ S G IIG GA IK +++Q IK+ + HS DR
Sbjct: 118 GSDFDC----ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHS----TDR 169
Query: 171 LVTLTGTLDEQMRALELILLKLSED-----------TLYSQTMTVPYTYAG--VFFSGFH 217
+V + G D + +++IL +SE Y +T Y Y G + F
Sbjct: 170 VVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDET----YDYGGFTMMFDDRR 225
Query: 218 GMPYG 222
G P G
Sbjct: 226 GRPVG 230
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A
Sbjct: 376 LAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNA 425
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 369 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 425
Query: 185 LELI 188
L+
Sbjct: 426 QYLL 429
>gi|197101075|ref|NP_001125573.1| insulin-like growth factor 2 mRNA-binding protein 2 [Pongo abelii]
gi|75041981|sp|Q5RB68.1|IF2B2_PONAB RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|55728499|emb|CAH90992.1| hypothetical protein [Pongo abelii]
Length = 556
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 366
Query: 216 FHGMPYGAVP 225
+ +G P
Sbjct: 367 YPHHQFGPFP 376
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----------------------KTKLRLIVPNSSC 133
A ++ KL + A + + + + L +P +
Sbjct: 337 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>gi|388579892|gb|EIM20211.1| hypothetical protein WALSEDRAFT_33458 [Wallemia sebi CBS 633.66]
Length = 349
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 18 RSTAPVKSLSSDPTEKPTY--------------IRFLVSNPLAGAVIGKGGSTINDFQSQ 63
RS +P SS E+P+Y +R L+ A +IGKGG I +
Sbjct: 9 RSRSPTPERSS--YERPSYKRPHIVKDDNPYLTVRSLIDTRDASIIIGKGGQNIAKIRET 66
Query: 64 SGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKT- 122
SG ++ +S S P +R++ +G +D + +A LV+ + E +Q G+K
Sbjct: 67 SGIKLVVSGS---IPNNPERLLTATGQLDAVSKAFGLVVRTINDEDF--NQPSLPGSKAV 121
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
L+ +PN G IIG+AGA IK + S A KIS D+ +R++++ G D
Sbjct: 122 TLKFAIPNMKMGFIIGRAGAKIKEIQEASGA--KISTSDYVLPNSTERVLSIDGVADAVH 179
Query: 183 RALELILLKLSEDT 196
A+ + + L++ T
Sbjct: 180 IAIYHVGMILADQT 193
>gi|168277712|dbj|BAG10834.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|184186906|gb|ACC69193.1| heterogeneous nuclear ribonucleoprotein K [Mus musculus]
Length = 440
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 40/245 (16%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAE 112
GG I ++ A + + S +RI+ IS I+ I + +I L H +
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEYQHYK 115
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDR 170
D +LRL++ S G IIG GA IK +++Q IK+ + HS DR
Sbjct: 116 GSDFDC----ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHS----TDR 167
Query: 171 LVTLTGTLDEQMRALELILLKLSED-----------TLYSQTMTVPYTYAG--VFFSGFH 217
+V + G D + +++IL +SE Y +T Y Y G + F
Sbjct: 168 VVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDET----YDYGGFTMMFDDRR 223
Query: 218 GMPYG 222
G P G
Sbjct: 224 GRPVG 228
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A
Sbjct: 374 LAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNA 423
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 367 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 423
Query: 185 LELI 188
L+
Sbjct: 424 QYLL 427
>gi|326473929|gb|EGD97938.1| hypothetical protein TESG_05238 [Trichophyton tonsurans CBS 112818]
Length = 545
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
+ N G +IG+ G + ++++GAR+Q S E T R+ +SG I
Sbjct: 196 IDNKHVGLIIGRQGENLRRIENETGARVQFLDSAEHN--KTIRLCRLSGP-KSIRDKAKA 252
Query: 101 VIDKLLTELHA----------EDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDD 150
ID++++E + + + D +++VP+ + G +IG++G T++ +
Sbjct: 253 EIDRIVSENNQARNDGRPSGQDGRPGDADGSETTKIMVPDRTVGLVIGRSGETVRDLAER 312
Query: 151 SQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS 199
S I I+R S GL R VTLTG+ RA ELIL + DT S
Sbjct: 313 SGCRINIARDGESINGL--RPVTLTGSQQAIQRAKELILGIVESDTRTS 359
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ +V + G VIG+ G T+ D +SG RI ++R E G R + ++G+ I RA
Sbjct: 287 KIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGL--RPVTLTGSQQAIQRA 344
Query: 98 VDLVIDKLLTELHAEDQADD--------------VGTKTKLRLIVPNSSCGSIIGKAGAT 143
+L++ + ++ G K ++ +P G +IGK G T
Sbjct: 345 KELILGIVESDTRTSGNQGQREPRGQGSGGENGGGGEKLNDKMFIPKEYVGMVIGKGGET 404
Query: 144 IKSFMDDSQAVIKI 157
I+ S I I
Sbjct: 405 IRELQTLSGCKINI 418
>gi|395323015|gb|EJF55548.1| hypothetical protein DICSQDRAFT_175774 [Dichomitus squalens
LYAD-421 SS1]
Length = 246
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 85/187 (45%), Gaps = 22/187 (11%)
Query: 20 TAPVKSLSSDPTEKPT-YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
T P++S S + PT +R L+ + + G++IG+ G I + SGA Q+S P
Sbjct: 48 THPLRSTSVESDSAPTTCLRLLIPHNMLGSIIGRHGRKIKAMHASSGA--QISTREHMLP 105
Query: 79 GTTDRIIMISGTIDEILRAV-----------DLVIDKLLTELHAEDQADD-----VGTKT 122
+T+ I+ + GT + I RAV +L +L A DQ GT+
Sbjct: 106 NSTEHIMQLCGTSESIRRAVRDICLCFLEDDELCAGTVLFHPAAPDQPSSPVTQPTGTRP 165
Query: 123 KLRLI-VPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQ 181
R I VP+ GSIIG+ G I S A I I++ G+ + VT+ T D
Sbjct: 166 FTREIDVPSDMVGSIIGRGGTNINEMKRMSGAEIVIAKAPRE--GVERQTVTIVETYDAY 223
Query: 182 MRALELI 188
RA L+
Sbjct: 224 KRARTLL 230
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE--LHAEDQADD 117
Q ++G LS E PG ++++ + G+++ A L+ L+ L + D
Sbjct: 3 LQEETGVTASLS---EAIPGVGEQVLRVLGSVESATEAYFLIASDLIRTHPLRSTSVESD 59
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGT 177
T LRL++P++ GSIIG+ G IK+ S A +IS +H + ++ L GT
Sbjct: 60 SAPTTCLRLLIPHNMLGSIIGRHGRKIKAMHASSGA--QISTREHMLPNSTEHIMQLCGT 117
Query: 178 LDEQMRALELILLKLSED 195
+ RA+ I L ED
Sbjct: 118 SESIRRAVRDICLCFLED 135
>gi|322790271|gb|EFZ15270.1| hypothetical protein SINV_11556 [Solenopsis invicta]
Length = 744
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 35/187 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDE 93
+ LV G VIGKGG I Q++SGA++Q + E PG DR ++SG +++
Sbjct: 313 VEVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREDGPG--DRKCLLSGKHQAVEQ 370
Query: 94 ILRAVDLVIDKLL--------------------------TELHAED--QADDVGTKTKLR 125
+ + +ID ++ E + D Q + K +
Sbjct: 371 ARQRIQELIDSVMRRDDGRNNMGGRGGPRGNGFGNNRNPNEYGSWDRRQGGPMQDKIETT 430
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
VP+S CG IIGK G TIK + A ++ R + S N+++ + G ++ A
Sbjct: 431 FTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRKNQSNE--NEKIFIIRGNPEQVEHAK 488
Query: 186 ELILLKL 192
+ KL
Sbjct: 489 RIFSEKL 495
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 39/189 (20%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR---IQLSRSHEFFPGTTDRIIMISGT 90
P ++ ++ P G +IGKGG TI Q +SGA+ IQ S E ++ + I+G
Sbjct: 200 PGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQE-----QEKPLRITGD 254
Query: 91 IDEILRA----VDLVIDKLLTELH---------------AEDQADDVG------TKTKLR 125
++ A +L+ +K + H + ++D G +
Sbjct: 255 PQKVEYAKQLVYELIAEKEMQMFHRGGRGGGGGGGTDRTGGNYSNDSGFNHGPANSDGVE 314
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
++VP ++ G +IGK G IK +S A ++ + G DR L+G + +A+
Sbjct: 315 VLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGRED--GPGDRKCLLSG----KHQAV 368
Query: 186 ELILLKLSE 194
E ++ E
Sbjct: 369 EQARQRIQE 377
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + + G +IG+GG I QS++G +IQ++ P +R+ ++G+ + + RA +L
Sbjct: 107 VPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLP---ERVCTLTGSREAVNRAKEL 163
Query: 101 VIDKLLTELHAEDQADDVGTKTK----------------LRLIVPNSSCGSIIGKAGATI 144
V+ + +E D + + +++P G IIGK G TI
Sbjct: 164 VLSIVNQRSRSEGIGDMNMSSGGGGGGGGSGGMMGHPGFVEIMIPGPKVGLIIGKGGETI 223
Query: 145 KSFMDDSQAVI 155
K + S A +
Sbjct: 224 KQLQEKSGAKM 234
>gi|194387672|dbj|BAG61249.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 19/166 (11%)
Query: 60 FQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVG 119
+ +SGARI +S + +RII ++G + I +A ++IDKL ++ +
Sbjct: 1 MREESGARINISEGN-----CPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAA 55
Query: 120 TK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS--RLDHSYYGLNDRLVTLT 175
++ LRL+VP S CGS+IGK G IK + + A ++++ L +S +R +T+
Sbjct: 56 SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNS----TERAITIA 111
Query: 176 GTLDEQMRALELILLKLSEDTLYS--QTMTVPY----TYAGVFFSG 215
G + ++ I + + E S + +T+PY + + V F+G
Sbjct: 112 GIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAG 157
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 92/230 (40%), Gaps = 65/230 (28%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q++ + P +T+R I
Sbjct: 52 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAIT 109
Query: 87 ISGTIDEILRAVD----LVIDKL---------------------------LTELH--AED 113
I+G I+ V ++++ L LT+LH A
Sbjct: 110 IAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQ 169
Query: 114 QA---------------------------DDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
Q+ D T L +PN G IIG+ GA I
Sbjct: 170 QSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINE 229
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDT 196
S A IKI+ + G DR VT+TG+ A LI ++LS +T
Sbjct: 230 IRQMSGAQIKIA---NPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 276
>gi|452846671|gb|EME48603.1| hypothetical protein DOTSEDRAFT_67594 [Dothistroma septosporum
NZE10]
Length = 361
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 11/163 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R +V++ AG +IGK G + D + ++G R +S+ PG DR++ ++G + I
Sbjct: 44 LRAIVTSKEAGVIIGKAGQNVADLREKTGVRAGVSK---VVPGVHDRVLTVTGALTGIAD 100
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSIIGKAGATIKSFMDDS--Q 152
A LV D L+ VG +RL++ ++ G+IIG+ G IK D S +
Sbjct: 101 AYGLVADSLVKGAPQMGMGGVVGNPNTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVR 160
Query: 153 AVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
V + L S +R+V + GT D +A+ I L +D
Sbjct: 161 MVAQKEMLPQS----TERIVEVQGTPDGIQKAVWEIGKCLVDD 199
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTK-------LRLIVPNSSCGSIIGKAGATIKSFMD 149
AVD ID L ++ A + D T+ + LR IV + G IIGKAG + +
Sbjct: 10 AVDSGIDNLADKIGALNTDDHPRTEEEYAQAQLTLRAIVTSKEAGVIIGKAGQNVADLRE 69
Query: 150 DSQAVIKISRLDHSYYGLNDRLVTLTGTL 178
+ +S++ G++DR++T+TG L
Sbjct: 70 KTGVRAGVSKV---VPGVHDRVLTVTGAL 95
>gi|307211366|gb|EFN87498.1| Far upstream element-binding protein 1 [Harpegnathos saltator]
Length = 751
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 35/187 (18%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDE 93
+ LV G VIGKGG I Q++SGA++Q + E PG DR ++SG +++
Sbjct: 301 VEVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREDGPG--DRKCLLSGKHQAVEQ 358
Query: 94 ILRAVDLVIDKLL--------------------------TELHAED--QADDVGTKTKLR 125
+ + +ID ++ E + D Q + K +
Sbjct: 359 ARQRIQELIDSVMRRDDGRNNMGGRGGPRGNGFGGSRNPNEYGSWDRRQGGPMQDKIETT 418
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
VP+S CG IIGK G TIK + A ++ R + S N+++ + G ++ A
Sbjct: 419 FTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNE--NEKIFIIRGNPEQVEHAK 476
Query: 186 ELILLKL 192
+ KL
Sbjct: 477 RIFSEKL 483
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDL 100
V + + G +IG+GG I QS++G +IQ++ P +R+ ++G+ + + RA +L
Sbjct: 109 VPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLP---ERVCTLTGSREAVNRAKEL 165
Query: 101 VIDKLLTELHAEDQADDVGTKTK---------LRLIVPNSSCGSIIGKAGATIKSFMDDS 151
V+ + +E D + +++P G IIGK G TIK + S
Sbjct: 166 VLSIVNQRSRSEGIGDMNMGGGGGGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQLQEKS 225
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
A + + + S ++ + +TG + A +L+ ++E +
Sbjct: 226 GAKMVVIQEGPSQE--QEKPLRITGDPQKVEHAKQLVYELIAEKEM 269
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 32/180 (17%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGAR---IQLSRSHEFFPGTTDRIIMISGTID 92
++ ++ P G +IGKGG TI Q +SGA+ IQ S E ++ + I+G
Sbjct: 197 FVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQE-----QEKPLRITGDPQ 251
Query: 93 EILRA----VDLVIDKLLTELHAEDQA--------DDVG------TKTKLRLIVPNSSCG 134
++ A +L+ +K + H + +D G + ++VP ++ G
Sbjct: 252 KVEHAKQLVYELIAEKEMQMFHRGGRGSERPGNYTNDNGFNHGPANNDGVEVLVPRAAVG 311
Query: 135 SIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
+IGK G IK +S A ++ + G DR L+G + +A+E ++ E
Sbjct: 312 VVIGKGGDMIKKIQAESGAKVQFQQGRED--GPGDRKCLLSG----KHQAVEQARQRIQE 365
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P + F V + G +IGKGG TI Q+GA +L R ++ ++I +I G
Sbjct: 410 PMQDKIETTFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQS--NENEKIFIIRG 467
Query: 90 TIDEILRAVDLVIDKL 105
+++ A + +KL
Sbjct: 468 NPEQVEHAKRIFSEKL 483
>gi|388582172|gb|EIM22478.1| eukaryotic type KH-domain (KH-domain type I) [Wallemia sebi CBS
633.66]
Length = 319
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 94/224 (41%), Gaps = 58/224 (25%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
STAP++S P T IR L+S+ L G VIG+ G I Q SG R+ S+ E P
Sbjct: 96 STAPLQS----PPSATTAIRLLISHNLMGTVIGRQGIKIKQIQDTSGVRMVASK--ELLP 149
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTEL----------------------------- 109
+T+RI+ + GT++ I A++ + LL +
Sbjct: 150 QSTERIVEVQGTVESIHIAINDIAKCLLEDWDRYSGTILYTPAPPNEHSLFNSSFNNSSI 209
Query: 110 ------------------HAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
A Q DV T+ + +P+ G IIG+AG+ I S
Sbjct: 210 RSINSVRRPDNFNMQSLNSALPQPRDVRTQ---HISIPSDMVGPIIGRAGSRISEIRRLS 266
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
A I I++ H G +RL T+ GT + +AL L+ +L +
Sbjct: 267 TAKIIIAKQPHDETG--ERLFTIIGTPEANEKALILLYSQLENE 308
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LVS AG +IGKGG + D + ++G + +S+ G +R++ I+G+ I
Sbjct: 23 LRALVSTKEAGIIIGKGGKNVADLRERTGVKAGVSK---VIAGVHERVLSITGSTSAIAD 79
Query: 97 AVDL----VIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
A + ++D L A Q+ T T +RL++ ++ G++IG+ G IK D S
Sbjct: 80 AFSIIAQTILDNPLNPSTAPLQSPPSAT-TAIRLLISHNLMGTVIGRQGIKIKQIQDTSG 138
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-TLYSQTMT---VPY 206
+ S+ L S +R+V + GT++ A+ I L ED YS T+ P
Sbjct: 139 VRMVASKELLPQS----TERIVEVQGTVESIHIAINDIAKCLLEDWDRYSGTILYTPAPP 194
Query: 207 TYAGVFFSGFH 217
+F S F+
Sbjct: 195 NEHSLFNSSFN 205
>gi|119598616|gb|EAW78210.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_b
[Homo sapiens]
Length = 428
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 366
Query: 216 FHGMPYGAVP 225
+ +G P
Sbjct: 367 YPHHQFGPFP 376
>gi|351705765|gb|EHB08684.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Heterocephalus
glaber]
Length = 546
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 115 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKSITILSTPE---- 168
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
+L +H E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 169 GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 228
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G+++ +A E I+ K+ E
Sbjct: 229 ISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRE 266
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + P GA+IGK G I +GA I+++ + P R+++I+G + +
Sbjct: 325 VHLFIPAPSVGAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFK 382
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGAT 143
A + K+ E + + K + + VP+ + G +IGK G T
Sbjct: 383 AQGRIYGKIKEENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKT 426
>gi|225543383|ref|NP_076159.3| insulin-like growth factor 2 mRNA-binding protein 3 [Mus musculus]
gi|81916748|sp|Q9CPN8.1|IF2B3_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3;
Short=mIMP-3; AltName: Full=IGF-II mRNA-binding protein
3; AltName: Full=VICKZ family member 3
gi|11933384|dbj|BAB19755.1| igf2 mRNA-binding protein 3 [Mus musculus]
gi|12847973|dbj|BAB27779.1| unnamed protein product [Mus musculus]
gi|28175449|gb|AAH45138.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|29145081|gb|AAH49082.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|148666183|gb|EDK98599.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Mus musculus]
Length = 579
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQASPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENT- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
GK G +K D+ I IS L +R +T+ G+++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRE 349
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ S A + + R D +
Sbjct: 476 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|74151175|dbj|BAE27710.1| unnamed protein product [Mus musculus]
Length = 579
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQASPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENT- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
GK G +K D+ I IS L +R +T+ G+++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRE 349
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ S A + + R D +
Sbjct: 476 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|26353480|dbj|BAC40370.1| unnamed protein product [Mus musculus]
Length = 579
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQASPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENT- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
GK G +K D+ I IS L +R +T+ G+++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRE 349
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ S A + + R D +
Sbjct: 476 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
>gi|302142130|emb|CBI19333.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 29/185 (15%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT------ 90
R L G+VIGKGG+ I+ + ++G ++ R E G +R+++I+G+
Sbjct: 47 FRVLCPASKTGSVIGKGGTIISQIRQETGVKV---RVEETVSGCDERVVLITGSDKDTEA 103
Query: 91 ---------------IDEILRAVDLVIDKLL---TELHAEDQADDVGTKTKLRLIVPNSS 132
I + +A+ LV +++ +E + D+ + +RL+V +S
Sbjct: 104 DNEQSKEDDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLVLSSQ 163
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRLDH--SYYGLNDRLVTLTGTLDEQMRALELILL 190
G ++GK G+ IK +S A I+I D +D LV +TG LD +AL+ I
Sbjct: 164 VGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQALQSISQ 223
Query: 191 KLSED 195
+L E+
Sbjct: 224 QLLEN 228
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 29 DPTEKPTYI-RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQ-LSRSH-EFFPGTTDRII 85
D + PT++ R LV + G ++GKGGS I ++SGA+I+ L R +D ++
Sbjct: 146 DSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELV 205
Query: 86 MISGTIDEILRAVDLVIDKLL 106
I+G +D +A+ + +LL
Sbjct: 206 QITGELDACKQALQSISQQLL 226
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Query: 59 DFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI---DEILRAVDLVIDKLLTELHAEDQA 115
+ Q+++G I++ + P + DR+I ISG+ D I A D V L +
Sbjct: 330 NLQNETGCEIKVL---DGVPDSEDRVIFISGSAHPDDRISPAQDAV---LRVQSRIVRAI 383
Query: 116 DDVGTKTKL-RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH--SYYGLNDRLV 172
D KT + RL+V ++ G ++GK GA I S A I+I D N+ +V
Sbjct: 384 PDSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVV 443
Query: 173 TLTGTLDEQMRALELILLKL 192
+ G + AL I +L
Sbjct: 444 QINGEFEAVQEALLQITTRL 463
>gi|109042331|ref|XP_001095005.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Macaca mulatta]
gi|402860701|ref|XP_003894761.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Papio anubis]
Length = 556
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 366
Query: 216 FHGMPYGAVP 225
+ +G P
Sbjct: 367 YPHHQFGPFP 376
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----------------------KTKLRLIVPNSSC 133
A ++ KL + A + + + + L +P +
Sbjct: 337 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>gi|56118219|ref|NP_001007226.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform b [Homo
sapiens]
gi|4883681|gb|AAD31596.1|AF057352_1 hepatocellular carcinoma autoantigen [Homo sapiens]
gi|119598615|gb|EAW78209.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Homo sapiens]
gi|410223072|gb|JAA08755.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251294|gb|JAA13614.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302888|gb|JAA30044.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342485|gb|JAA40189.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 556
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 366
Query: 216 FHGMPYGAVP 225
+ +G P
Sbjct: 367 YPHHQFGPFP 376
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----------------------KTKLRLIVPNSSC 133
A ++ KL + A + + + + L +P +
Sbjct: 337 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
>gi|345320258|ref|XP_001518426.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
1-like, partial [Ornithorhynchus anatinus]
Length = 464
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I +
Sbjct: 251 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENS--GAAEKAISIQSSPGGCSS 308
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D+ I
Sbjct: 309 ACRMILEIMHKEAKDTKTADEV----PLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKIT 364
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G+++ RA + I+ K+ E
Sbjct: 365 ISSLQDLTLYNPERTITVKGSIENCSRAEQEIMKKVRE 402
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N G +IGK G + + + +I +S + +R I + G+I+ R
Sbjct: 332 LKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISSLQDLTLYNPERTITVKGSIENCSR 391
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++ K+ + A + +++ +P + G+IIGK G IK + A IK
Sbjct: 392 AEQEIMKKVREAYENDVAAMSPPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIK 451
Query: 157 ISRL 160
++ +
Sbjct: 452 VTSV 455
>gi|86170571|ref|XP_966041.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|46362283|emb|CAG25221.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 755
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 86/163 (52%), Gaps = 13/163 (7%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG--TTDRIIMISGTI 91
P +RF++ +IGK G I + +S +GA + + + T DRI+ +SG+
Sbjct: 380 PCVVRFVLDVETTAWIIGKAGCHIKEIRSVTGAGAVIVDAPDNIENVKTCDRILTLSGSA 439
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
+ A+ L++ ++ E++ ++ +R++VP + +IG+ G+ IK + S
Sbjct: 440 ENKFNALKLIVRQM------EEREKNINNP--MRMLVPGKAASFLIGRKGSIIKYITEQS 491
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
+ I++++ S N++LV +TG+ + ++ A L+L KL E
Sbjct: 492 GSQIQVAKNKESE---NEKLVLITGSPEAKILASVLVLQKLEE 531
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHE--FFPGTTDRIIMISGTIDEILR 96
L+ N G VIGK G+ + + + GA I+ + + +P +++I+ I G + +
Sbjct: 63 LLLPNRAIGYVIGKSGNNVREIEKACGAVIKCQKEFDVSVYPPPSEKILTIFGKKENKKK 122
Query: 97 AVDLVI--DKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A++LV+ K + + ED K + +IVP S IIG+ G+ I S + S
Sbjct: 123 ALELVLGKSKSVMDFQEED------GKESIVIIVPTRSIPIIIGQKGSKISSLSERSSCE 176
Query: 155 IKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFS 214
I + + D G+ D+ + + ++ I+ L ED + + +T+ S
Sbjct: 177 INVHKDD--VPGIKDKAIFIKSKKISKIIDCIGIIYDLLEDVVENGILTI---------S 225
Query: 215 GFHGMP 220
F G+P
Sbjct: 226 EFPGVP 231
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 112 EDQADDVGTKTKLR----LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR-LDHSYY- 165
ED + T T++R L++PN + G +IGK+G ++ AVIK + D S Y
Sbjct: 45 EDGKSNCATSTEMRIPYCLLLPNRAIGYVIGKSGNNVREIEKACGAVIKCQKEFDVSVYP 104
Query: 166 GLNDRLVTLTGTLDEQMRALELILLK 191
+++++T+ G + + +ALEL+L K
Sbjct: 105 PPSEKILTIFGKKENKKKALELVLGK 130
>gi|407924223|gb|EKG17277.1| K-like protein [Macrophomina phaseolina MS6]
Length = 357
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 19 STAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFP 78
S P+ + + +R +VS+ AG +IGK G + + + ++G R +S+ P
Sbjct: 29 SGEPIPRTEEEYAQAQLTLRAIVSSKEAGVIIGKAGQNVANLRDETGVRAGVSK---VVP 85
Query: 79 GTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTK--LRLIVPNSSCGSI 136
G DR++ ++G + I +A LV LL + + T +RL++ ++ G+I
Sbjct: 86 GVHDRVLTVTGALSGISKAYHLVAKGLLEGAPSVGMGGVINTSGTHPVRLLISHNQMGTI 145
Query: 137 IGKAGATIKSFMDDS--QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IG+AG IK D S + V + L S +R+V + GT + +A I L +
Sbjct: 146 IGRAGLKIKQIQDASGVRMVAQKEMLPQS----TERIVEIQGTPEGIEKATWEIGKCLID 201
Query: 195 D-------TLYSQTMTVPYTYAGVFFSGFHG 218
D LY+ + V G +GF G
Sbjct: 202 DHERGYGTVLYNPAVRVQAGTTGPVTNGFTG 232
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRS-HEFFPGTTDRIIMISGTIDEILRAVDLVID 103
+ G +IG+GGS I++ + SGARI ++++ H+ T +R+ I G+ +A+ L+ +
Sbjct: 286 MVGCIIGRGGSKISEIRKSSGARISIAKAPHDE---TGERMFTIMGSPSSNEKALYLLYE 342
Query: 104 KLLTELHAEDQA 115
L E QA
Sbjct: 343 NLEAEKMRRSQA 354
>gi|384248562|gb|EIE22046.1| hypothetical protein COCSUDRAFT_43031 [Coccomyxa subellipsoidea
C-169]
Length = 243
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEI 94
T R LV + G+VIGK G+ + + ++GARI++ E P +R+I+IS D
Sbjct: 103 TVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVV---EGVPNCDERVIVISARSD-A 158
Query: 95 LRAVDLVIDKLLTELHAEDQADDVG-----TKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
R D + L ++HA + G R++V ++ G +IGKAGA IK +
Sbjct: 159 ARHTDAAQEALF-KVHARVHEHEEGPHPPPANATTRMLVCHTQAGCLIGKAGAIIKEIRE 217
Query: 150 DSQAVIKI-SRLDHSYYGL-NDRLV 172
S A IKI D GL NDR+V
Sbjct: 218 ASGAHIKILPAEDLPPCGLSNDRVV 242
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,695,305,029
Number of Sequences: 23463169
Number of extensions: 203254191
Number of successful extensions: 545593
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 1532
Number of HSP's that attempted gapping in prelim test: 529949
Number of HSP's gapped (non-prelim): 10083
length of query: 291
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 150
effective length of database: 9,050,888,538
effective search space: 1357633280700
effective search space used: 1357633280700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)