BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022837
(291 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 114/203 (56%), Gaps = 22/203 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 50 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 108
Query: 96 RAVDLVIDKLLTEL---------------HAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
AV I + + E+ D + ++++IVPNS+ G IIGK
Sbjct: 109 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRI---KQVKIIVPNSTAGLIIGKG 165
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED
Sbjct: 166 GATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGS 224
Query: 201 TMTVPYT--YAGVFFSGFHGMPY 221
+ + Y V S G PY
Sbjct: 225 CLNISYANVTGPVANSNPTGFPY 247
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 388 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 447
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 448 TITGTPAATQAAQYLITQRITYE 470
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 386 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 443
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 444 NRKVTITGTPAATQAAQYLITQRIT 468
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 109/186 (58%), Gaps = 20/186 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GT+ E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 109
Query: 96 RAVDLVIDKLLTEL---------------HAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
AV I + + E+ D + ++++IVPNS+ G IIGK
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRI---KQVKIIVPNSTAGLIIGKG 166
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
GAT+K+ M+ S A +++S+ L +R+VT++G ++ +A+ELI+ K+ ED
Sbjct: 167 GATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGS 225
Query: 201 TMTVPY 206
+ + Y
Sbjct: 226 CLNISY 231
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 389 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 448
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 449 TITGTPAATQAAQYLITQRITYE 471
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 387 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 444
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 445 NRKVTITGTPAATQAAQYLITQRIT 469
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ ++ GT E L
Sbjct: 34 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 92
Query: 96 RAVDLVIDKLLTEL-HAEDQADDVG-----------TKTKLRLIVPNSSCGSIIGKAGAT 143
AV I + + E+ A + + V + +LIVPNS+ G IIGK GAT
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 144 IKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMT 203
+K+ M+ S A +++S+ L +R+VT++G ++ +A+ I+ K+ ED S +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 211
Query: 204 VPYT-YAG-VFFSGFHGMPYGA 223
+ Y AG V S G PY +
Sbjct: 212 ISYANVAGPVANSNPTGSPYAS 233
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGT 90
+ V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R + I+G+
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Score = 38.9 bits (89), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L AE A + K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 395 LTAEKLAAE-SAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 453
Query: 169 DRLVTLTGTLDEQMRALELILLKLSEDTLYSQ 200
+R VT+TG+ A LI S+ Y Q
Sbjct: 454 NRRVTITGSPAATQAAQYLI----SQRVTYEQ 481
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 111/207 (53%), Gaps = 38/207 (18%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEIL 95
+++ L+ + AG++IGKGG TI Q ++GA I+LS+S +F+PGTT+R+ +I GTI E L
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 109
Query: 96 RAVDLVIDKLLTEL----------------------------------HAEDQADDVGTK 121
AV I + + E+ +D + T
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 122 --TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G +
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDG-INLQERVVTVSGEPE 228
Query: 180 EQMRALELILLKLSEDTLYSQTMTVPY 206
+ +A+ELI+ K+ ED + + Y
Sbjct: 229 QNRKAVELIIQKIQEDPQSGSCLNISY 255
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 413 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 472
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 473 TITGTPAATQAAQYLITQRITYE 495
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 159 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQ 217
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 218 ERVVTVSGEPEQNRKAVELIIQKI 241
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 411 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 468
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 469 NRKVTITGTPAATQAAQYLITQRIT 493
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 41/210 (19%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR---SHEFFPGTTDRIIMISGTID 92
+++ L+ + AG++IGKGG TI Q ++GA I+LS+ S +F+PGTT+R+ +I GT+
Sbjct: 51 FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTV- 109
Query: 93 EILRAVDLVIDKLLTEL----------------------------------HAEDQADDV 118
E L AV I + + E+ +D +
Sbjct: 110 EALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPM 169
Query: 119 GTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
T ++++IVPNS+ G IIGK GAT+K+ M+ S A +++S+ L +R+VT++G
Sbjct: 170 TTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDG-INLQERVVTVSG 228
Query: 177 TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++ +A+ELI+ K+ ED + + Y
Sbjct: 229 EPEQNRKAVELIIQKIQEDPQSGSCLNISY 258
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 31 TEKPT-----YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRII 85
TEK T + V L GA++GKGG T+ ++Q +GARIQ+S+ EF PGT +R +
Sbjct: 416 TEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKV 475
Query: 86 MISGTIDEILRAVDLVIDKLLTE 108
I+GT A L+ ++ E
Sbjct: 476 TITGTPAATQAAQYLITQRITYE 498
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 24 KSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT 81
KS SDP T + ++ +V N AG +IGKGG+T+ QSGA +QLS+ +
Sbjct: 162 KSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQ 220
Query: 82 DRIIMISGTIDEILRAVDLVIDKL 105
+R++ +SG ++ +AV+L+I K+
Sbjct: 221 ERVVTVSGEPEQNRKAVELIIQKI 244
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLN 168
L E D G+K + + VP + G+I+GK G T+ + + + A I+IS+ G
Sbjct: 414 LGTEKSTD--GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTR 471
Query: 169 DRLVTLTGTLDEQMRALELILLKLS 193
+R VT+TGT A LI +++
Sbjct: 472 NRKVTITGTPAATQAAQYLITQRIT 496
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 331
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 332 SAASISLAQYLINARLSSE 350
Score = 38.5 bits (88), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 331
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 332 SAASISLAQYLINARLSSE 350
Score = 38.5 bits (88), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 331
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 332 SAASISLAQYLINARLSSE 350
Score = 38.5 bits (88), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++++ ++ LRL+VP + CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTG---TLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R +T+ G ++ E ++ + L++L+ + + MT+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISG---TIDEILRAVDLVIDKLLTE 108
I+G ++ E ++ + LV+ + L++
Sbjct: 148 IAGVPQSVTECVKQICLVMLETLSQ 172
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 117 DVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTG 176
D T+T L +PN+ G IIG+ GA I S A IKI+ + G + R VT+TG
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA---NPVEGSSGRQVTITG 331
Query: 177 TLDEQMRALELILLKLSED 195
+ A LI +LS +
Sbjct: 332 SAASISLAQYLINARLSSE 350
Score = 38.5 bits (88), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 11 SPDVHGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQL 70
SP+V G + S D + + T+ + N L G +IG+ G+ IN+ + SGA+I++
Sbjct: 264 SPEVKGYWA-------SLDASTQTTH-ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Query: 71 SRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTE 108
+ E G++ R + I+G+ I A L+ +L +E
Sbjct: 316 ANPVE---GSSGRQVTITGSAASISLAQYLINARLSSE 350
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 297 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 353
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 354 QYLINARLTSEV 365
Score = 35.8 bits (81), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 109 LHAEDQADDV-GTKTKL---------RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
LH+ ++A ++ G + L L +PN G IIG+ G I S A IKI+
Sbjct: 271 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 330
Query: 159 RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++ G ++R +T+TGT A LI +L+ +
Sbjct: 331 ---NATEGSSERQITITGTPANISLAQYLINARLTSE 364
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G T+ + +SGARI +S + +RI+ I+G D I +
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN-----CPERIVTITGPTDAIFK 102
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++ K ++ +K LRL+VP S CGS+IGK G+ IK + + A
Sbjct: 103 AFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++GT D ++ ++ I + + E + T+PY
Sbjct: 163 VQVAGDMLPNS----TERAVTISGTPDAIIQCVKQICVVMLESP--PKGATIPY 210
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 23 VKSLSSDP--TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
+ S+S+ P ++ P +R +V G++IGKGGS I + + +GA++Q+ + + P +
Sbjct: 116 INSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNS 173
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLL 106
T+R + ISGT D I++ V + +L
Sbjct: 174 TERAVTISGTPDAIIQCVKQICVVML 199
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
+ N L G +IG+ G+ IN+ + SGA+I+++ + E G+++R I I+GT I A
Sbjct: 297 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANISLA 353
Query: 98 VDLVIDKLLTEL 109
L+ +L +E+
Sbjct: 354 QYLINARLTSEV 365
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 109 LHAEDQADDV-GTKTKL---------RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
LH+ ++A ++ G + L L +PN G IIG+ G I S A IKI+
Sbjct: 271 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 330
Query: 159 RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
++ G ++R +T+TGT A LI +L+ +
Sbjct: 331 ---NATEGSSERQITITGTPANISLAQYLINARLTSE 364
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 19/189 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYS--QTMTVPY---- 206
++++ L +S +R +T+ G + ++ I + + E S + +T+PY
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP 186
Query: 207 TYAGVFFSG 215
+ + V F+G
Sbjct: 187 SSSPVIFAG 195
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLLTEL 109
I+G I+ V + +L L
Sbjct: 148 IAGIPQSIIECVKQICVVMLETL 170
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 282 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 338
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 339 GSAASISLAQYLINVRLSSE 358
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 282 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 338
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 339 GSAASISLAQYLINVRLSSET 359
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
IR L+ G++IGK G ++ + +SGARI +S + +RII ++G + I +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN-----CPERIITLAGPTNAIFK 70
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
A ++IDKL ++ + ++ LRL+VP S CGS+IGK G IK + + A
Sbjct: 71 AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 155 IKIS--RLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R +T+ G + ++ I + + E + +T+PY +
Sbjct: 131 VQVAGDMLPNS----TERAITIAGIPQSIIECVKQICVVMLESP--PKGVTIPYRPKPSS 184
Query: 209 AGVFFSG 215
+ V F+G
Sbjct: 185 SPVIFAG 191
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S+ + P +R +V G++IGKGG I + + +GA++Q+ + + P +T+R I
Sbjct: 90 STAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAIT 147
Query: 87 ISGTIDEILRAVDLVIDKLL 106
I+G I+ V + +L
Sbjct: 148 IAGIPQSIIECVKQICVVML 167
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
D + + T + N L G +IG+ G+ IN+ + SGA+I+++ E G+TDR + I+
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTIT 335
Query: 89 GTIDEILRAVDLVIDKLLTE 108
G+ I A L+ +L +E
Sbjct: 336 GSAASISLAQYLINVRLSSE 355
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
D T L +PN G IIG+ GA I S A IKI+ + G DR VT+T
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA---NPVEGSTDRQVTIT 335
Query: 176 GTLDEQMRALELILLKLSEDT 196
G+ A LI ++LS +T
Sbjct: 336 GSAASISLAQYLINVRLSSET 356
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAEDQADDVGTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A ++ LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
++ ++ LR+++ GSIIGK G T+K + S A I IS +R+
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERIT 63
Query: 173 TLTGTLDEQMRALELILLKLSED 195
T+TG+ A+ +I KL ED
Sbjct: 64 TITGSTAAVFHAVSMIAFKLDED 86
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY----TY 208
++++ L +S +R VT++G D + + I + E + T+PY +
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPYHPSLSL 188
Query: 209 AGVFFSGFHGMP----YGAVPP 226
V S G YGAV P
Sbjct: 189 GTVLLSANQGFSVQGQYGAVTP 210
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDV----------------- 118
I+ V + +L T L + +Q V
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ 218
Query: 119 -------------------GTKTKLR-LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
GT+T + +VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 15/174 (8%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+ G++IGK G T+ + QS ARI +S +RI I+G+ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS-----CPERITTITGSTAAVFH 74
Query: 97 AVDLVIDKLLTELHAE--DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAV 154
AV ++ KL +L A + + LRL++P S CGS+IGKAG IK + + A
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 155 IKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPY 206
++++ L +S +R VT++G D + + I + E + T+PY
Sbjct: 135 VQVAGDLLPNS----TERAVTVSGVPDAIILCVRQICAVILESP--PKGATIPY 182
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 34 PTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE 93
P +R ++ G++IGK G+ I + + +GA++Q+ + + P +T+R + +SG D
Sbjct: 101 PVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDA 158
Query: 94 ILRAVDLVIDKLL------------------TELHAEDQADDVGTK---------TKLR- 125
I+ V + +L T L + +Q V + TKL+
Sbjct: 159 IILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQ 218
Query: 126 ---------------------------LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKIS 158
+VPN G +IG+ G+ I S A IKI
Sbjct: 219 LSGHAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI- 277
Query: 159 RLDHSYYGLNDRLVTLTGT 177
+ G +R VT+TG+
Sbjct: 278 --GNQAEGAGERHVTITGS 294
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 29 DPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMIS 88
DP+ + + FLV N L G VIG+ GS I++ + SGA I++ E G +R + I+
Sbjct: 236 DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE---GAGERHVTIT 292
Query: 89 GTIDEILRAVDLVIDKLLT 107
G+ I A L+ L T
Sbjct: 293 GSPVSIALAQYLITACLET 311
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 27 SSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
S D ++R L A ++G G+TI+ +S++ ARI +S + G +RI+
Sbjct: 59 SPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNN---IRGVPERIVY 115
Query: 87 ISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKS 146
+ GT D++ +A +++ LL E ED +D+ + + L++P+ G IIGK G+ ++
Sbjct: 116 VRGTCDDVAKAYGMIVRALLEEHGNEDNGEDI--EISINLLIPHHLMGCIIGKRGSRLRE 173
Query: 147 FMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
D S A K+ + NDR++T+ G D
Sbjct: 174 IEDLSAA--KLFASPNQLLLSNDRILTINGVPD 204
Score = 39.3 bits (90), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 113 DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
D D+V + LR++ I+G GATI ++ A I IS ++ G+ +R+V
Sbjct: 58 DSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINIS---NNIRGVPERIV 114
Query: 173 TLTGTLDEQMRALELILLKLSED 195
+ GT D+ +A +I+ L E+
Sbjct: 115 YVRGTCDDVAKAYGMIVRALLEE 137
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APVK P + P +R LV GA+IGK G+TI + Q+ ++I + R G
Sbjct: 187 APVKQ---QPVDIP--LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGA 239
Query: 81 TDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKA 140
++ I I T + A ++++ + E AD+V L+++ N+ G +IGK
Sbjct: 240 AEKAISIHSTPEGCSAACKMILEIMQKEAKDTKTADEV----PLKILAHNNFVGRLIGKE 295
Query: 141 GATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE------ 194
G +K D++ I IS L +R +T+ G+++ +A + I+ K+ E
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCKAEQEIMKKVREAYENDV 355
Query: 195 DTLYSQTMTVP-YTYAGVFFSGFHGMPYGAVPPPVPAV 231
+ Q+ +P A V G AVPPP +V
Sbjct: 356 AAMSLQSHLIPGLNLAAV---GLFPASSNAVPPPPSSV 390
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 30 PTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG 89
P E+ T F+ + + GA+IGK G I + A I+++ P + R+++I+G
Sbjct: 401 PPEQETVHVFIPAQAV-GAIIGKKGQHIKQLSRFASASIKIAPPE--TPDSKVRMVVITG 457
Query: 90 TIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ +A + KL E + ++V +T +R VP S+ G +IGK G T+ +
Sbjct: 458 PPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGKGGKTVNELQN 514
Query: 150 DSQAVIKISR 159
+ A + + R
Sbjct: 515 LTAAEVVVPR 524
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 77/204 (37%), Gaps = 45/204 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N G +IGK G + + + +I +S + +R I + G+I+ +
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCK 338
Query: 97 AVDLVIDKLLTELHAEDQAD--------------DVG----------------------- 119
A ++ K+ E + D A VG
Sbjct: 339 AEQEIMKKV-REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGAAPYS 397
Query: 120 -----TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTL 174
+ + + +P + G+IIGK G IK + A IKI+ + + R+V +
Sbjct: 398 SFMPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVVI 455
Query: 175 TGTLDEQMRALELILLKLSEDTLY 198
TG + Q +A I KL E+ +
Sbjct: 456 TGPPEAQFKAQGRIYGKLKEENFF 479
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
T+IR S AG VIGKGG T+N+ Q+ + A + + R P +++I+
Sbjct: 489 THIRVPAS--AAGRVIGKGGKTVNELQNLTAAEVVVPRDQ--TPDENEQVIV 536
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 25/252 (9%)
Query: 7 SYVPSPDV------HGKRSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDF 60
SY+P +V H R SS + +R LV GA+IGK G TI +
Sbjct: 153 SYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNI 212
Query: 61 QSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGT 120
Q+ +R+ + R G ++ + I T + A ++++ + E A++V
Sbjct: 213 TKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEV-- 268
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRL-DHSYYGLNDRLVTLTGTLD 179
L+++ N G +IGK G +K ++ I IS L D S Y +R +T+ GT++
Sbjct: 269 --PLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYN-PERTITVRGTIE 325
Query: 180 EQMRALELILLKLSED------TLYSQTMTVP---YTYAGVFFSGFHGMPYGAVPPPVPA 230
A I+ KL E + Q +P + G+F +G +P A P VP
Sbjct: 326 ACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPP 385
Query: 231 VP--HNTAAHYG 240
P H A H G
Sbjct: 386 SPPYHPFATHSG 397
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 423 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 480
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 481 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 537
Query: 157 ISR 159
+ R
Sbjct: 538 VPR 540
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 LIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRAL 185
L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A
Sbjct: 425 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQ 482
Query: 186 ELILLKLSEDTLYS 199
I KL E+ ++
Sbjct: 483 GRIFGKLKEENFFN 496
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSH 74
V + AG VIGKGG T+N+ Q+ + A + + R
Sbjct: 509 VPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQ 542
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVVITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 77/205 (37%), Gaps = 46/205 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N G +IGK G + + + +I +S + +R I + G I+ R
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCR 338
Query: 97 AVDLVIDKLLTELHAEDQAD--------------DVG----------------------- 119
A ++ K+ E + D A VG
Sbjct: 339 AEQEIMKKV-REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYS 397
Query: 120 ------TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
+ +++ +P + G+IIGK G IK + A IKI+ + + R+V
Sbjct: 398 SFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVV 455
Query: 174 LTGTLDEQMRALELILLKLSEDTLY 198
+TG + Q +A I KL E+ +
Sbjct: 456 ITGPPEAQFKAQGRIYGKLKEENFF 480
Score = 35.8 bits (81), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
T+IR S AG VIGKGG T+N+ Q+ + A + + R P D++I+
Sbjct: 490 THIRVPAS--AAGRVIGKGGKTVNELQNLTAAEVVVPRDQ--TPDENDQVIV 537
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYSSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVIITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 77/205 (37%), Gaps = 46/205 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N G +IGK G + + + +I +S + +R I + G I+ R
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCR 338
Query: 97 AVDLVIDKLLTELHAEDQAD--------------DVG----------------------- 119
A ++ K+ E + D A VG
Sbjct: 339 AEQEIMKKV-REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYS 397
Query: 120 ------TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
+ +++ +P + G+IIGK G IK + A IKI+ + + R+V
Sbjct: 398 SFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVI 455
Query: 174 LTGTLDEQMRALELILLKLSEDTLY 198
+TG + Q +A I KL E+ +
Sbjct: 456 ITGPPEAQFKAQGRIYGKLKEENFF 480
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
T+IR S AG VIGKGG T+N+ Q+ + A + + R P D++I+
Sbjct: 490 THIRVPAS--AAGRVIGKGGKTVNELQNLTAAEVVVPRDQ--TPDENDQVIV 537
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I + T +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSS 255
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E AD+V L+++ N+ G +IGK G +K D++ I
Sbjct: 256 ACKMILEIMHKEAKDTKTADEV----PLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G ++ RA + I+ K+ E
Sbjct: 312 ISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVRE 349
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 20 TAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPG 79
AP S P ++ ++ + GA+IGK G I + A I+++ P
Sbjct: 393 AAPYGSFMQAPEQE--MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPD 448
Query: 80 TTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGK 139
+ R+++I+G + +A + KL E + ++V +T +R VP S+ G +IGK
Sbjct: 449 SKVRMVVITGPPEAQFKAQGRIYGKLKEE-NFFGPKEEVKLETHIR--VPASAAGRVIGK 505
Query: 140 AGATIKSFMDDSQAVIKISR 159
G T+ + + A + + R
Sbjct: 506 GGKTVNELQNLTAAEVVVPR 525
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 77/205 (37%), Gaps = 46/205 (22%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N G +IGK G + + + +I +S + +R I + G I+ R
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCR 338
Query: 97 AVDLVIDKLLTELHAEDQAD--------------DVG----------------------- 119
A ++ K+ E + D A VG
Sbjct: 339 AEQEIMKKV-REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYG 397
Query: 120 ------TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVT 173
+ +++ +P + G+IIGK G IK + A IKI+ + + R+V
Sbjct: 398 SFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKV--RMVV 455
Query: 174 LTGTLDEQMRALELILLKLSEDTLY 198
+TG + Q +A I KL E+ +
Sbjct: 456 ITGPPEAQFKAQGRIYGKLKEENFF 480
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
T+IR S AG VIGKGG T+N+ Q+ + A + + R P D++I+
Sbjct: 490 THIRVPAS--AAGRVIGKGGKTVNELQNLTAAEVVVPRDQ--TPDENDQVIV 537
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R L+S AG +IGK G + + +S + + ++++ P DR++ ISG ++ ++R
Sbjct: 96 LRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKA---VPNVHDRVLTISGPLENVVR 152
Query: 97 AVDLVIDKLL-TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
A +ID + + D T KLRL++ +S GSIIG+ G IK D +
Sbjct: 153 AYRFIIDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRM 212
Query: 156 KISR--LDHSYYGLNDRLVTLTGTLD 179
S+ L S +R V + GT+D
Sbjct: 213 IASKDMLPQS----TERTVEIHGTVD 234
Score = 39.3 bits (90), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 121 KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDE 180
K + +P G IIG+ G+ I S + I I++ H G +R+ T+TGT +E
Sbjct: 320 KVTQNISIPADMVGCIIGRGGSKISEIRRTSGSKISIAKEPHDETG--ERMFTITGTHEE 377
Query: 181 QMRALELILLKL 192
+AL L+ +L
Sbjct: 378 NEKALFLLYQQL 389
Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDK 104
+ G +IG+GGS I++ + SG++I +++ E T +R+ I+GT +E +A+ L+ +
Sbjct: 331 MVGCIIGRGGSKISEIRRTSGSKISIAK--EPHDETGERMFTITGTHEENEKALFLLYQQ 388
Query: 105 LLTE 108
L E
Sbjct: 389 LEME 392
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 28/280 (10%)
Query: 4 NESSYVPSPDVHGKRSTAP-------VKSLSSDPT-EKPTYIRFLVSNPLAGAVIGKGGS 55
+E++ +P V G+R P SL + P + +R LV GA+IGK G+
Sbjct: 156 DETAAADAPAVGGRRGFNPRGPPRQGSPSLGARPKLQSDVPLRLLVPTQFVGAIIGKEGA 215
Query: 56 TINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQA 115
TI + Q+ ++I + R G ++ I + T + A +++ + E
Sbjct: 216 TIRNITKQTHSKIDIHRKEN--AGAAEKPITVHSTPEGCSSACRNIMEIMQKEAIDTKIT 273
Query: 116 DDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
+++ L+++ N+ G +IGK G +K D+ I IS L +R +T+
Sbjct: 274 EEI----PLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVK 329
Query: 176 GTLDEQMRALELILLKLSED------TLYSQTMTVPYTYAGVFFSG---FHGMPYGAVPP 226
GTLD +A E I+ K+ E ++ Q+ +P G+ + F G G + P
Sbjct: 330 GTLDACAKAEEEIMKKVRESYENDVAAMHLQSNLIP----GLNLNALGLFPGAASGGISP 385
Query: 227 PVPAVPHNTAAHYGPNMGGRKFQNNKVLLPWPLNPVGMLL 266
V + P A G G + ++ V L P VG ++
Sbjct: 386 SVVSGPP-PGAQAGYQSFGAQMESETVHLFIPALAVGAII 424
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 78/208 (37%), Gaps = 48/208 (23%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N G +IGK G + + + +I +S + +R I + GT+D +
Sbjct: 278 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGTLDACAK 337
Query: 97 AVDLVIDKL-------LTELH------------------------------------AED 113
A + ++ K+ + +H A+
Sbjct: 338 AEEEIMKKVRESYENDVAAMHLQSNLIPGLNLNALGLFPGAASGGISPSVVSGPPPGAQA 397
Query: 114 QADDVGTKTK---LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDR 170
G + + + L +P + G+IIGK G IK + A IKI+ D R
Sbjct: 398 GYQSFGAQMESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADG--IDAKQR 455
Query: 171 LVTLTGTLDEQMRALELILLKLSEDTLY 198
+V ++G + Q +A I KL E+ +
Sbjct: 456 MVIISGPPEAQFKAQGRIFGKLKEENFF 483
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + R+++ISG + +A + KL
Sbjct: 421 GAIIGKQGQHIKQLSRFAGASIKIAPADGI--DAKQRMVIISGPPEAQFKAQGRIFGKLK 478
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
E + G K +++L VP+ + G +IGK G T+ + + A + + R D
Sbjct: 479 EE-------NFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVPR-DQ 530
Query: 163 SYYGLNDRLVTLTG 176
+ + +V +TG
Sbjct: 531 TPDENDQVVVKITG 544
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
AG VIGKGG T+N+ Q+ + A + + R P D++++
Sbjct: 502 AGRVIGKGGKTVNELQNLTSAEVVVPRDQT--PDENDQVVV 540
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTLYSQTMTVPYTYAGVFFSG 215
IS L D S Y +R +T+ GT++ A I+ KL E + M T++G F S
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAVNTHSGYFSSL 366
Query: 216 FHGMPYGAVP 225
+ +G P
Sbjct: 367 YPHHQFGPFP 376
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT++
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACAS 336
Query: 97 AVDLVIDKLLTELHAEDQADDVGT-----------------------KTKLRLIVPNSSC 133
A ++ KL + A + + + + L +P +
Sbjct: 337 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAV 396
Query: 134 GSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +A I KL
Sbjct: 397 GAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFKAQGRIFGKLK 454
Query: 194 EDTLYS 199
E+ ++
Sbjct: 455 EENFFN 460
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 444
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 445 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 157 ISR 159
+ R
Sbjct: 502 VPR 504
Score = 31.2 bits (69), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 41 VSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
V + AG VIGKGG T+N+ Q+ + A + + R P + +I+
Sbjct: 473 VPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQT--PDENEEVIV 516
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQASPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENT- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
GK G +K D+ I IS L +R +T+ G+++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRE 349
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ S A + + R D +
Sbjct: 476 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 79/207 (38%), Gaps = 48/207 (23%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N G +IGK G + + + +I +S E +R I + G+++ +
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAK 338
Query: 97 AVDLVIDKLLTELHAED------------------------------------------- 113
A + ++ K+ E + D
Sbjct: 339 AEEEIMKKI-RESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPY 397
Query: 114 -QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
Q + T+T + L +P S G+IIGK G IK + A IKI+ + + R+V
Sbjct: 398 PQFEQSETET-VHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKV--RMV 454
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYS 199
+TG + Q +A I K+ E+ S
Sbjct: 455 IITGPPEAQFKAQGRIYGKIKEENFVS 481
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM-ISGTIDEILRAVDLVIDK 104
AG VIGKGG T+N+ QS S A + + R P D++++ I+G + I +
Sbjct: 499 AGRVIGKGGKTVNELQSLSSAEVVVPRDQ--TPDENDQVVVKITGHF-YACQVAQRKIQE 555
Query: 105 LLTELHAEDQ 114
+LT++ Q
Sbjct: 556 ILTQVKQHQQ 565
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P P + P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 181 RQGSPGSVSKQKPCDLP--LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 237
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + +L +H E Q + L+++ N+ G +I
Sbjct: 238 -GAAEKSITILSTPE----GTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLI 292
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
GK G +K D+ I IS L +R +T+ G ++ +A E I+ K+ E
Sbjct: 293 GKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRE 349
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + K+
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKIAPAE--APDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 107 TELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYG 166
E + + K + + VP+ + G +IGK G T+ + S A + + R D +
Sbjct: 476 EENFVSPKEE---VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPR-DQTPDE 531
Query: 167 LNDRLVTLTG 176
+ +V +TG
Sbjct: 532 NDQVVVKITG 541
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 78/207 (37%), Gaps = 48/207 (23%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N G +IGK G + + + +I +S E +R I + G ++ +
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAK 338
Query: 97 AVDLVIDKLLTELHAED------------------------------------------- 113
A + ++ K+ E + D
Sbjct: 339 AEEEIMKKI-RESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMTPPY 397
Query: 114 -QADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLV 172
Q + T+T + L +P S G+IIGK G IK + A IKI+ + + R+V
Sbjct: 398 PQFEQSETET-VHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKV--RMV 454
Query: 173 TLTGTLDEQMRALELILLKLSEDTLYS 199
+TG + Q +A I K+ E+ S
Sbjct: 455 IITGPPEAQFKAQGRIYGKIKEENFVS 481
Score = 35.0 bits (79), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM-ISGTIDEILRAVDLVIDK 104
AG VIGKGG T+N+ Q+ S A + + R P D++++ I+G + I +
Sbjct: 499 AGRVIGKGGKTVNELQNLSSAEVVVPRDQ--TPDENDQVVVKITGHF-YACQVAQRKIQE 555
Query: 105 LLTELHAEDQ 114
+LT++ Q
Sbjct: 556 ILTQVKQHQQ 565
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 110/264 (41%), Gaps = 42/264 (15%)
Query: 2 ETNESSYVPSPDVHGKRSTAPVKSLS----SDPTEKPTYIRFLVSNPLAGAVIGKGGSTI 57
E E ++ + + +GKR ++ S T++ +R L+ + AGAVIGKGG I
Sbjct: 4 EQQEETFT-NTETNGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNI 62
Query: 58 NDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADD 117
++ A + + S +RI+ IS + I + +I L H + D
Sbjct: 63 KALRTDYNASVSVPDSS-----GPERILSISADTETIGEILKKIIPTLEEYQHYKGSDFD 117
Query: 118 VGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR--LDHSYYGLNDRLVTLT 175
+LRL++ S G IIG GA IK +++Q IK+ + HS DR+V +
Sbjct: 118 C----ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHS----TDRVVLIG 169
Query: 176 GTLDEQMRALELILLKLSED-----------TLYSQTMTVPYTYAG--VFFSGFHGMPYG 222
G D + +++IL +SE Y +T Y Y G + F G P G
Sbjct: 170 GKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDET----YDYGGFTMMFDDRRGRPVG 225
Query: 223 AVPPPVPAVPHNTAAHYGPNMGGR 246
P PN GGR
Sbjct: 226 -----FPMRGRGGFDRMPPNRGGR 244
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A
Sbjct: 362 LAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNA 411
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 355 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 411
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFF 213
L+ + + Y+G FF
Sbjct: 412 QYLLQNSVKQ-------------YSGKFF 427
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 9/182 (4%)
Query: 16 GKRSTAPVKSLSSDPTEKPTY---IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSR 72
G+R S S+ +KP +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 175 GQRGPPRQGSPSATTRQKPQSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHR 234
Query: 73 SHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSS 132
G ++ I I T + A ++++ + E Q + L+++ N+
Sbjct: 235 KEN--AGAAEKPITIHSTPEGCSTACKIIMEI----MQKEAQDTKFTEEIPLKILAHNNF 288
Query: 133 CGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKL 192
G +IGK G +K D+ I IS L +R +T+ G+++ +A E I+ K+
Sbjct: 289 VGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGSIETCAKAEEEIMKKI 348
Query: 193 SE 194
E
Sbjct: 349 RE 350
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK GATI++ +Q+ I I R +++ G ++ +T+ T +
Sbjct: 199 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENA--GAAEKPITIHSTPEGCST 256
Query: 184 ALEL---ILLKLSEDTLYSQTM 202
A ++ I+ K ++DT +++ +
Sbjct: 257 ACKIIMEIMQKEAQDTKFTEEI 278
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + KL
Sbjct: 422 GAIIGKQGQHIKQLSRFAGASIKIAPAE--GPDAKLRMVIITGPPEAQFKAQGRIYGKLK 479
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
E + G K +++L VP+ + G +IGK G T+ + + A + + R D
Sbjct: 480 EE-------NFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR-DQ 531
Query: 163 SYYGLNDRLVTLTG 176
+ + +V +TG
Sbjct: 532 TPDENDQVVVKITG 545
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK G IK + A IKI+ + L R+V +TG + Q +
Sbjct: 412 VHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKL--RMVIITGPPEAQFK 469
Query: 184 ALELILLKLSEDTLY 198
A I KL E+ +
Sbjct: 470 AQGRIYGKLKEENFF 484
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
AG VIGKGG T+N+ Q+ + A + + R P D++++
Sbjct: 503 AGRVIGKGGKTVNELQNLTSAEVVVPRDQ--TPDENDQVVV 541
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 18 RSTAPVKSLSSDP-TEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEF 76
R +P + P TE P +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 190 RQGSPGAAARPKPQTEVP--LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN- 246
Query: 77 FPGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSI 136
G ++ I I T + A ++++ + E Q + L+++ N+ G +
Sbjct: 247 -AGAAEKPITIHSTPEGCSAACKIIMEI----MQKEAQDTKFTEEIPLKILAHNNFVGRL 301
Query: 137 IGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IGK G +K D+ I IS L +R +T+ G+++ +A E I+ K+ E
Sbjct: 302 IGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGSIEPCAKAEEEIMKKIRE 359
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
T+ LR++VP G+IIGK GATI++ +Q+ I I R +++ G ++ +T+ T +
Sbjct: 204 TEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENA--GAAEKPITIHSTPE 261
Query: 180 EQMRALEL---ILLKLSEDTLYSQTM 202
A ++ I+ K ++DT +++ +
Sbjct: 262 GCSAACKIIMEIMQKEAQDTKFTEEI 287
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + KL
Sbjct: 431 GAIIGKQGQHIKQLSRFAGASIKIAPAE--GPDAKLRMVIITGPPEAQFKAQGRIYGKLK 488
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
E + G K +++L VP+ + G +IGK G T+ + + A + + R D
Sbjct: 489 EE-------NFFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR-DQ 540
Query: 163 SYYGLNDRLVTLTG 176
+ ++ +V +TG
Sbjct: 541 TPDENDEVVVKITG 554
Score = 37.7 bits (86), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK G IK + A IKI+ + L R+V +TG + Q +
Sbjct: 421 VHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKL--RMVIITGPPEAQFK 478
Query: 184 ALELILLKLSEDTLY 198
A I KL E+ +
Sbjct: 479 AQGRIYGKLKEENFF 493
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
AG VIGKGG T+N+ Q+ + A + + R P D +++
Sbjct: 512 AGRVIGKGGKTVNELQNLTSAEVVVPRDQ--TPDENDEVVV 550
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G+TI + Q+ ++I + R G ++ I I T +
Sbjct: 207 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN--AGAAEKPITIHSTPEGCSA 264
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E Q + L+++ N+ G +IGK G +K D+ I
Sbjct: 265 ACKIIMEI----MQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 320
Query: 157 ISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L +R +T+ G+++ +A E ++ K+ E
Sbjct: 321 ISPLQDLTLYNPERTITVKGSIETCAKAEEEVMKKIRE 358
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LR++VP G+IIGK GATI++ +Q+ I I R +++ G ++ +T+ T +
Sbjct: 207 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENA--GAAEKPITIHSTPEGCSA 264
Query: 184 ALEL---ILLKLSEDTLYSQTM 202
A ++ I+ K ++DT +++ +
Sbjct: 265 ACKIIMEIMQKEAQDTKFTEEI 286
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P R+++I+G + +A + KL
Sbjct: 430 GAIIGKQGQHIKQLSRFAGASIKIAPAE--GPDAKLRMVIITGPPEAQFKAQGRIYGKLK 487
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDH 162
E + G K +++L VP+ + G +IGK G T+ + + A + + R D
Sbjct: 488 EE-------NFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR-DQ 539
Query: 163 SYYGLNDRLVTLTG 176
+ + +V +TG
Sbjct: 540 TPDENDQVVVKITG 553
Score = 37.7 bits (86), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK G IK + A IKI+ + L R+V +TG + Q +
Sbjct: 420 VHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKL--RMVIITGPPEAQFK 477
Query: 184 ALELILLKLSEDTLY 198
A I KL E+ +
Sbjct: 478 AQGRIYGKLKEENFF 492
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 46 AGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM 86
AG VIGKGG T+N+ Q+ + A + + R P D++++
Sbjct: 511 AGRVIGKGGKTVNELQNLTSAEVVVPRDQ--TPDENDQVVV 549
>sp|Q9Y2W6|TDRKH_HUMAN Tudor and KH domain-containing protein OS=Homo sapiens GN=TDRKH
PE=1 SV=2
Length = 561
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E I V +IG+ G+ I + Q+GARI + +R+++ISG
Sbjct: 50 EDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTED----VGDERVLLISGFP 105
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
++ +A I ++LTE T +L VP S G IIG+ G TI+S S
Sbjct: 106 VQVCKA-KAAIHQILTE----------NTPVSEQLSVPQRSVGRIIGRGGETIRSICKAS 154
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
A I + L+ RL+ ++GT E A LIL K+SED
Sbjct: 155 GAKITCDKESEGTLLLS-RLIKISGTQKEVAAAKHLILEKVSED 197
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 123 KLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQM 182
++ + VP + IIG+ GA IK + A I + D ++R++ ++G +
Sbjct: 54 EIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVG----DERVLLISGFPVQVC 109
Query: 183 RALELILLKLSEDTLYSQTMTVPYTYAG 210
+A I L+E+T S+ ++VP G
Sbjct: 110 KAKAAIHQILTENTPVSEQLSVPQRSVG 137
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 6/177 (3%)
Query: 18 RSTAPVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFF 77
R +P + S +R LV GA+IGK G+TI + Q+ ++I + R
Sbjct: 182 RQMSPGSGIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA- 240
Query: 78 PGTTDRIIMISGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSII 137
G ++ I I T + A ++++ + E AD+V L+++ N+ G +I
Sbjct: 241 -GAAEKPISIHSTPEGCSAACRMILEIMNQEAKDTKTADEV----PLKVLAHNNFVGRLI 295
Query: 138 GKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
GK G +K D+ I IS L +R +T+ G+++ A + I+ K+ E
Sbjct: 296 GKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSIEACCLAEQEIMKKVRE 352
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
LRL+VP G+IIGK GATI++ +Q+ I + R +++ G ++ +++ T +
Sbjct: 201 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA--GAAEKPISIHSTPEGCSA 258
Query: 184 ALELILLKLSEDTLYSQT 201
A +IL ++++ ++T
Sbjct: 259 ACRMILEIMNQEAKDTKT 276
Score = 38.1 bits (87), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 47 GAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLVIDKLL 106
GA+IGK G I +GA I+++ + P + R+++++G + +A + KL
Sbjct: 420 GALIGKKGQHIKQLSRFAGASIKIAPAE--APDSKMRMVIVTGPPEAQFKAQGRIYGKLK 477
Query: 107 TELHAEDQADDVGTKTKLRL----IVPNSSCGSIIGKAGATIKSFMDDSQAVIKISR 159
E + G K +++L V ++ G +IGK G T+ + + A + + R
Sbjct: 478 EE-------NFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEVVVPR 527
Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 78/203 (38%), Gaps = 43/203 (21%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTID---- 92
++ L N G +IGK G + + + +I +S + +R I + G+I+
Sbjct: 282 LKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSIEACCL 341
Query: 93 ---EILRAVDLVIDKLLTELHAEDQ---ADDVGT-------------------------- 120
EI++ V D + ++ + ++G
Sbjct: 342 AEQEIMKKVREAYDNDIAAMNQQTHLIPGLNLGAIGLFPPSSAMPPPALGNSVPGPPYGP 401
Query: 121 -----KTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLT 175
+ + + +P + G++IGK G IK + A IKI+ + + R+V +T
Sbjct: 402 MGASEQETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKM--RMVIVT 459
Query: 176 GTLDEQMRALELILLKLSEDTLY 198
G + Q +A I KL E+ +
Sbjct: 460 GPPEAQFKAQGRIYGKLKEENFF 482
Score = 34.7 bits (78), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 35 TYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIM-ISGTIDE 93
T+I+ V+ AG VIGKGG T+N+ Q+ + A + + R E P D++I+ I G
Sbjct: 492 THIK--VAAAAAGRVIGKGGKTVNELQNLTAAEVVVPR--EQTPDEHDQVIVKIIGHFYA 547
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGT 120
A + D +LT++ + + +GT
Sbjct: 548 SQLAQRKIRD-ILTQVKQQQKGGGMGT 573
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 39 FLVSNPLAG--AVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI---DE 93
F V PL VIGKGGSTI + SG+ I+++ S G + +I+++ T D
Sbjct: 314 FKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKC-GDDECVIIVTATESPDDM 372
Query: 94 ILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQA 153
AV+ V+ LL E ++ A++V K++L+V + G +IGK+G+ I + A
Sbjct: 373 KSMAVEAVL--LLQEYINDEDAENV----KMQLLVSSKVIGCVIGKSGSVINEIRKRTNA 426
Query: 154 VIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSEDTL 197
I IS+ G D LV ++G + AL I+L+L ED L
Sbjct: 427 NICISK------GKKDDLVEVSGEVSSVRDALIQIVLRLREDVL 464
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 32/184 (17%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDE---- 93
R L + G VIGK G IN + + A+I++ + G + R+I I ++ E
Sbjct: 39 RILCPIDVVGGVIGKSGKVINAIRHNTKAKIKV---FDQLHGCSQRVITIYCSVKEKQEE 95
Query: 94 ----------ILRAVDLVIDKLLTELHAEDQADDVGTKT------KLRLIVPNSSCGSII 137
+ A D ++ K+ + A D+ ++ T + RL+VP S S+I
Sbjct: 96 IGFTKSENEPLCCAQDALL-KVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLI 154
Query: 138 GKAGATIKSFMDDSQAVIKISRLD-----HSYYGLNDRLVTLTG---TLDEQMRALELIL 189
GKAG IK ++A +K+ D H D +V ++G ++ + + A+ I+
Sbjct: 155 GKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIM 214
Query: 190 LKLS 193
K++
Sbjct: 215 YKIN 218
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 28 SDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMI 87
+D + ++ LVS+ + G VIGK GS IN+ + ++ A I +S+ G D ++ +
Sbjct: 388 NDEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISK------GKKDDLVEV 441
Query: 88 SGTIDEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSF 147
SG + + A+ ++ +L ++ + D V T+ K N S S AG T+ SF
Sbjct: 442 SGEVSSVRDALIQIVLRLREDVLGD--KDSVATR-KPPARTDNCSFLSGSSNAGYTLPSF 498
Query: 148 M 148
M
Sbjct: 499 M 499
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 120 TKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLD 179
+ + L +++P + ++GK G +++ S A+I+IS S+ D + L+GTL
Sbjct: 534 SSSALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSH---GDHIALLSGTL- 589
Query: 180 EQMRALE 186
EQMR E
Sbjct: 590 EQMRCAE 596
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 49 VIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLV 101
V+GKGG + + + SGA I++S S D I ++SGT++++ A +LV
Sbjct: 550 VMGKGGGNLENIRRISGAMIEISASK---TSHGDHIALLSGTLEQMRCAENLV 599
>sp|Q80VL1|TDRKH_MOUSE Tudor and KH domain-containing protein OS=Mus musculus GN=Tdrkh
PE=1 SV=1
Length = 560
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 32 EKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTI 91
E I V +IG+ G+ I + Q+GARI + +R+++ISG
Sbjct: 50 EDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDV----GDERVLLISGFP 105
Query: 92 DEILRAVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDS 151
++ +A I ++LTE T +L VP S G IIG+ G TI+S S
Sbjct: 106 VQVCKA-KAAIHQILTE----------NTPVFEQLSVPQRSVGRIIGRGGETIRSICKAS 154
Query: 152 QAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED 195
A I + L+ RL+ ++GT E A LIL K+SED
Sbjct: 155 GAKITCDKESEGTLLLS-RLIKISGTQKEVAAAKHLILEKVSED 197
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 72/175 (41%), Gaps = 29/175 (16%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT-DRIIMISGTIDEILR 96
RF V G VIG+ G I Q+ +G RIQ GTT DRI I+G D
Sbjct: 280 RFAV-----GIVIGRNGEMIKKIQNDAGVRIQFKPDD----GTTPDRIAQITGPPDRCQH 330
Query: 97 AVDLVIDKLLTELHAEDQADDV------------------GTKTKLRLIVPNSSCGSIIG 138
A +++ D LL + A + G + IVP G IIG
Sbjct: 331 AAEIITD-LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIG 389
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
K G TIKS S A I++ R N +L T+ GT + A +LI K+
Sbjct: 390 KGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIG 444
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
+ V + + G +IG+GG I+ Q +SG +IQ++ P +R M++GT + + A
Sbjct: 101 YKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPESVQSAK 157
Query: 99 DLVIDKLLTELHAE---DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
L +D+++ + D G + +++P S G +IGK G TIK + +A +
Sbjct: 158 RL-LDQIVEKGRPAPGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIKQLQE--RAGV 213
Query: 156 KISRL-DHSYYGLNDRLVTLTGTLDEQMRALELIL 189
K+ + D D+ + +TG + +A E++L
Sbjct: 214 KMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVL 248
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 72/175 (41%), Gaps = 29/175 (16%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT-DRIIMISGTIDEILR 96
RF V G VIG+ G I Q+ +G RIQ GTT DRI I+G D
Sbjct: 279 RFAV-----GIVIGRNGEMIKKIQNDAGVRIQFKPDD----GTTPDRIAQITGPPDRCQH 329
Query: 97 AVDLVIDKLLTELHAEDQADDV------------------GTKTKLRLIVPNSSCGSIIG 138
A +++ D LL + A + G + IVP G IIG
Sbjct: 330 AAEIITD-LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIG 388
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
K G TIKS S A I++ R N +L T+ GT + A +LI K+
Sbjct: 389 KGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIG 443
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
+ V + + G +IG+GG I+ Q +SG +IQ++ P +R M++GT + + A
Sbjct: 100 YKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPESVQSAK 156
Query: 99 DLVIDKLLTELHAE---DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
L +D+++ + D G + +++P S G +IGK G TIK + +A +
Sbjct: 157 RL-LDQIVEKGRPAPGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIKQLQE--RAGV 212
Query: 156 KISRL-DHSYYGLNDRLVTLTGTLDEQMRALELIL 189
K+ + D D+ + +TG + +A E++L
Sbjct: 213 KMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVL 247
>sp|P38199|HEK2_YEAST Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=HEK2 PE=1
SV=1
Length = 381
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 41/161 (25%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APV ++ PT R L+S A +IG GSTI+ ++ + +I +S E PG
Sbjct: 33 APVVGTTAQPT---INHRLLLSLKEAAKIIGTKGSTISRIRAANAVKIGIS---EKVPGC 86
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL--------------------------------LTE 108
+DRI+ +G + + A+ ++D L E
Sbjct: 87 SDRILSCAGNVINVANAIGDIVDVLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDE 146
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ Q +D+G +RLIV NS SIIGKAGATIKS ++
Sbjct: 147 IRDLQQLEDIGY---VRLIVANSHISSIIGKAGATIKSLIN 184
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------ 89
Y+R +V+N ++IGK G+TI ++ G +I S+ +F P + +RII I G
Sbjct: 158 YVRLIVANSHISSIIGKAGATIKSLINKHGVKIVASK--DFLPASDERIIEIQGFPGSIT 215
Query: 90 ----TIDEI-LRAVDLVIDKL------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
I EI L VD+ L + E + + T++ L +P G+IIG
Sbjct: 216 NVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAIIG 275
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
+ IK+ ++ I + R D N R +T + ++ E +LLK
Sbjct: 276 RGMNRIKNLKTFTKTNIVVERKDDDDKDENFRKFIITSKFPKNVKLAESMLLK 328
>sp|A6ZKR5|HEK2_YEAS7 Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain YJM789) GN=HEK2 PE=3 SV=1
Length = 381
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 41/161 (25%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APV ++ PT R L+S A +IG GSTI+ ++ + +I +S E PG
Sbjct: 33 APVVGTTAQPT---INHRLLLSLKEAAKIIGTKGSTISRIRAANAVKIGIS---EKVPGC 86
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL--------------------------------LTE 108
+DRI+ +G + + A+ ++D L E
Sbjct: 87 SDRILSCAGNVINVANAIGDIVDVLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDE 146
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ Q +D+G +RLIV NS SIIGKAGATIKS ++
Sbjct: 147 IRDLQQLEDIGY---VRLIVANSHISSIIGKAGATIKSLIN 184
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------ 89
Y+R +V+N ++IGK G+TI ++ G +I S+ +F P + +RII I G
Sbjct: 158 YVRLIVANSHISSIIGKAGATIKSLINKHGVKIVASK--DFLPASDERIIEIQGFPGSIT 215
Query: 90 ----TIDEI-LRAVDLVIDKL------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
I EI L VD+ L + E + + T++ L +P G+IIG
Sbjct: 216 NVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAIIG 275
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
+ IK+ ++ I + R D N R +T + ++ E +LLK
Sbjct: 276 RGMNRIKNLKTFTKTNIVVERKDDDDKDENFRKFIITSKFPKNVKLAESMLLK 328
>sp|B3LNH0|HEK2_YEAS1 Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=HEK2 PE=3 SV=1
Length = 381
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 41/161 (25%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APV ++ PT R L+S A +IG GSTI+ ++ + +I +S E PG
Sbjct: 33 APVVGTTAQPT---INHRLLLSLKEAAKIIGTKGSTISRIRAANSVKIGIS---EKVPGC 86
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL--------------------------------LTE 108
+DRI+ +G + + A+ ++D L E
Sbjct: 87 SDRILSCAGNVINVANAIGDIVDVLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDE 146
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ Q +D+G +RLIV NS SIIGKAGATIKS ++
Sbjct: 147 IRDLQQLEDIGY---VRLIVANSHISSIIGKAGATIKSLIN 184
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------ 89
Y+R +V+N ++IGK G+TI ++ G +I S+ +F P + +RII I G
Sbjct: 158 YVRLIVANSHISSIIGKAGATIKSLINKHGVKIVASK--DFLPASDERIIEIQGFPGSIT 215
Query: 90 ----TIDEI-LRAVDLVIDKL------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
I EI L VD+ L + E + + T++ L +P G+IIG
Sbjct: 216 NVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAIIG 275
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
+ IK+ ++ I + R D N R +T + ++ E +LLK
Sbjct: 276 RGMNRIKNLKTFTKTNIVVERKDDDDKDENFRKFIITSKFPKNVKLAESMLLK 328
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 72/175 (41%), Gaps = 29/175 (16%)
Query: 38 RFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTT-DRIIMISGTIDEILR 96
RF V G VIG+ G I Q+ +G RIQ GTT +RI I+G D
Sbjct: 284 RFAV-----GIVIGRNGEMIKKIQNDAGVRIQFKPDD----GTTPERIAQITGPPDRCQH 334
Query: 97 AVDLVIDKLLTELHAEDQADDV------------------GTKTKLRLIVPNSSCGSIIG 138
A +++ D LL + A + G + IVP G IIG
Sbjct: 335 AAEIITD-LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIG 393
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLKLS 193
K G TIKS S A I++ R N +L T+ GT + A +LI K+
Sbjct: 394 KGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIG 448
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 39 FLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAV 98
+ V + + G +IG+GG I+ Q +SG +IQ++ P +R M++GT + + A
Sbjct: 105 YKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPESVQSAK 161
Query: 99 DLVIDKLLTELHAE---DQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVI 155
L +D+++ + D G + +++P S G +IGK G TIK + +A +
Sbjct: 162 RL-LDQIVEKGRPAPGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIKQLQE--RAGV 217
Query: 156 KISRL-DHSYYGLNDRLVTLTGTLDEQMRALELIL 189
K+ + D D+ + +TG + +A E++L
Sbjct: 218 KMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVL 252
>sp|C8Z3W4|HEK2_YEAS8 Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain Lalvin EC1118 / Prise de mousse)
GN=HEK2 PE=3 SV=1
Length = 381
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 41/161 (25%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APV ++ PT R L+S A +IG GSTI+ ++ + +I +S E PG
Sbjct: 33 APVVGTTAQPT---INHRLLLSLKEAAKIIGTKGSTISRIRAANSVKIGIS---EKVPGC 86
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL--------------------------------LTE 108
+DRI+ +G + + A+ ++D L E
Sbjct: 87 SDRILSCAGNVINVANAIGDIVDVLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDE 146
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ Q +D+G +RLIV NS SIIGKAGATIKS ++
Sbjct: 147 IRDLQQLEDIGY---VRLIVANSHISSIIGKAGATIKSLIN 184
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------ 89
Y+R +V+N ++IGK G+TI ++ G +I S+ +F P + +RII I G
Sbjct: 158 YVRLIVANSHISSIIGKAGATIKSLINKHGVKIVASK--DFLPASDERIIEIQGFPGSIT 215
Query: 90 ----TIDEI-LRAVDLVIDKL------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
I EI L VD+ L + E + + T++ L +P G+IIG
Sbjct: 216 NVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAIIG 275
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
+ IK+ ++ I + R D N R +T + ++ E +LLK
Sbjct: 276 RGMNRIKNLKTFTKTNIVVERKDDDDKDENFRKFIITSKFPKNVKLAESMLLK 328
>sp|C7GND0|HEK2_YEAS2 Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain JAY291) GN=HEK2 PE=3 SV=1
Length = 381
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 41/161 (25%)
Query: 21 APVKSLSSDPTEKPTYIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGT 80
APV ++ PT R L+S A +IG GSTI+ ++ + +I +S E PG
Sbjct: 33 APVVGTTAQPT---INHRLLLSLKEAAKIIGTKGSTISRIRAANSVKIGIS---EKVPGC 86
Query: 81 TDRIIMISGTIDEILRAVDLVIDKL--------------------------------LTE 108
+DRI+ +G + + A+ ++D L E
Sbjct: 87 SDRILSCAGNVINVANAIGDIVDVLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDE 146
Query: 109 LHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMD 149
+ Q +D+G +RLIV NS SIIGKAGATIKS ++
Sbjct: 147 IRDLQQLEDIGY---VRLIVANSHISSIIGKAGATIKSLIN 184
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 36 YIRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG------ 89
Y+R +V+N ++IGK G+TI ++ G +I S+ +F P + +RII I G
Sbjct: 158 YVRLIVANSHISSIIGKAGATIKSLINKHGVKIVASK--DFLPASDERIIEIQGFPGSIT 215
Query: 90 ----TIDEI-LRAVDLVIDKL------LTELHAEDQADDVGTKTKLRLIVPNSSCGSIIG 138
I EI L VD+ L + E + + T++ L +P G+IIG
Sbjct: 216 NVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAIIG 275
Query: 139 KAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRALELILLK 191
+ IK+ ++ I + R D N R +T + ++ E +LLK
Sbjct: 276 RGMNRIKNLKTFTKTNIVVERKDDDDKDENFRKFIITSKFPKNVKLAESMLLK 328
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 8/159 (5%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+R LV GA+IGK G TI + Q+ +R+ + R G ++ + I T +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN--SGAAEKPVTIHATPEGTSE 253
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A ++++ + E A+++ L+++ N G +IGK G +K ++ I
Sbjct: 254 ACRMILEIMQKEADETKLAEEI----PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKIT 309
Query: 157 ISRL-DHSYYGLNDRLVTLTGTLDEQMRALELILLKLSE 194
IS L D S Y +R +T+ GT++ A I+ KL E
Sbjct: 310 ISSLQDLSIYN-PERTITVKGTVEACASAEIEIMKKLRE 347
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
+ + GA+IGK G+ I +GA I+++ + P ++R+++I+G + +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE--GPDVSERMVIITGPPEAQFK 487
Query: 97 AVDLVIDKLLTELHAEDQADDVGTKTKLRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIK 156
A + KL E + + ++V + +R VP+S+ G +IGK G T+ + + A +
Sbjct: 488 AQGRIFGKLKEE-NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 544
Query: 157 ISR 159
+ R
Sbjct: 545 VPR 547
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 124 LRLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMR 183
+ L +P + G+IIGK GA IK + A IKI+ + +++R+V +TG + Q +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGP--DVSERMVIITGPPEAQFK 487
Query: 184 ALELILLKLSEDTLYS 199
A I KL E+ ++
Sbjct: 488 AQGRIFGKLKEENFFN 503
Score = 35.8 bits (81), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 37 IRFLVSNPLAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILR 96
++ L N L G +IGK G + + ++G +I +S + +R I + GT+ E
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTV-EACA 335
Query: 97 AVDLVIDKLLTELHAED 113
+ ++ I K L E D
Sbjct: 336 SAEIEIMKKLREAFEND 352
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 115/265 (43%), Gaps = 56/265 (21%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDEILRAVDLVIDKLL--- 106
GG I ++ A + + S +RI+ IS TI EIL+ + +++ L
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEGLQLP 115
Query: 107 -----TELHAEDQADDV-------GTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
++L E A + G+ +LRL++ S G IIG GA IK +++Q
Sbjct: 116 SPTATSQLPLESDAVECLNYQHFKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQ 175
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-----------TLYS 199
IK+ + HS DR+V + G D + +++IL +SE Y
Sbjct: 176 TTIKLFQECCPHS----TDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYD 231
Query: 200 QTMTVPYTYAG--VFFSGFHGMPYG 222
+T Y Y G + F G P G
Sbjct: 232 ET----YDYGGFTMMFDDRRGRPVG 252
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNA 447
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 447
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFF 213
L+ + + Y+G FF
Sbjct: 448 QYLLQNSVKQ-------------YSGKFF 463
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 115/265 (43%), Gaps = 56/265 (21%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDEILRAVDLVIDKLL--- 106
GG I ++ A + + S +RI+ IS TI EIL+ + +++ L
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEGLQLP 115
Query: 107 -----TELHAEDQADDV-------GTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
++L E A + G+ +LRL++ S G IIG GA IK +++Q
Sbjct: 116 SPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQ 175
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-----------TLYS 199
IK+ + HS DR+V + G D + +++IL +SE Y
Sbjct: 176 TTIKLFQECCPHS----TDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYD 231
Query: 200 QTMTVPYTYAG--VFFSGFHGMPYG 222
+T Y Y G + F G P G
Sbjct: 232 ET----YDYGGFTMMFDDRRGRPVG 252
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLV 101
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A L+
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNAQYLL 451
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 447
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFF 213
L+ + + Y+G FF
Sbjct: 448 QYLLQNSVKQ-------------YSGKFF 463
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 115/265 (43%), Gaps = 56/265 (21%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDEILRAVDLVIDKLL--- 106
GG I ++ A + + S +RI+ IS TI EIL+ + +++ L
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEGLQLP 115
Query: 107 -----TELHAEDQADDV-------GTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
++L E A + G+ +LRL++ S G IIG GA IK +++Q
Sbjct: 116 SPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQ 175
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-----------TLYS 199
IK+ + HS DR+V + G D + +++IL +SE Y
Sbjct: 176 TTIKLFQECCPHS----TDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYD 231
Query: 200 QTMTVPYTYAG--VFFSGFHGMPYG 222
+T Y Y G + F G P G
Sbjct: 232 ET----YDYGGFTMMFDDRRGRPVG 252
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLV 101
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A L+
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNAQYLL 451
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 447
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFF 213
L+ + + Y+G FF
Sbjct: 448 QYLLQNSVKQ-------------YSGKFF 463
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 115/265 (43%), Gaps = 56/265 (21%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDEILRAVDLVIDKLL--- 106
GG I ++ A + + S +RI+ IS TI EIL+ + +++ L
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEGLQLP 115
Query: 107 -----TELHAEDQADDV-------GTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
++L E A + G+ +LRL++ S G IIG GA IK +++Q
Sbjct: 116 SPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQ 175
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-----------TLYS 199
IK+ + HS DR+V + G D + +++IL +SE Y
Sbjct: 176 TTIKLFQECCPHS----TDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYD 231
Query: 200 QTMTVPYTYAG--VFFSGFHGMPYG 222
+T Y Y G + F G P G
Sbjct: 232 ET----YDYGGFTMMFDDRRGRPVG 252
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRAVDLV 101
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A L+
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNAQYLL 451
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 447
Query: 185 LELILLKLSEDTLYSQTMTVPYTYAGVFF 213
L+ + + Y+G FF
Sbjct: 448 QYLLQNSVKQ-------------YSGKFF 463
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 115/265 (43%), Gaps = 56/265 (21%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDEILRAVDLVIDKLL--- 106
GG I ++ A + + S +RI+ IS TI EIL+ + +++ L
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEGLQLP 115
Query: 107 -----TELHAEDQADDV-------GTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
++L E A + G+ +LRL++ S G IIG GA IK +++Q
Sbjct: 116 SPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQ 175
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-----------TLYS 199
IK+ + HS DR+V + G D + +++IL +SE Y
Sbjct: 176 TTIKLFQECCPHS----TDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYD 231
Query: 200 QTMTVPYTYAG--VFFSGFHGMPYG 222
+T Y Y G + F G P G
Sbjct: 232 ET----YDYGGFTMMFDDRRGRPVG 252
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNA 447
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 447
Query: 185 LELI 188
L+
Sbjct: 448 QYLL 451
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 115/265 (43%), Gaps = 56/265 (21%)
Query: 1 METNE-SSYVPSPDVHGKRSTAPVKSLSSDP-------TEKPTYIRFLVSNPLAGAVIGK 52
MET + P+ + +G+ P + + + T++ +R L+ + AGAVIGK
Sbjct: 1 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGK 60
Query: 53 GGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISG---TIDEILRAVDLVIDKLL--- 106
GG I ++ A + + S +RI+ IS TI EIL+ + +++ L
Sbjct: 61 GGKNIKALRTDYNASVSVPDSS-----GPERILSISADIETIGEILKKIIPTLEEGLQLP 115
Query: 107 -----TELHAEDQADDV-------GTK--TKLRLIVPNSSCGSIIGKAGATIKSFMDDSQ 152
++L E A + G+ +LRL++ S G IIG GA IK +++Q
Sbjct: 116 SPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQ 175
Query: 153 AVIKISR--LDHSYYGLNDRLVTLTGTLDEQMRALELILLKLSED-----------TLYS 199
IK+ + HS DR+V + G D + +++IL +SE Y
Sbjct: 176 TTIKLFQECCPHS----TDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYD 231
Query: 200 QTMTVPYTYAG--VFFSGFHGMPYG 222
+T Y Y G + F G P G
Sbjct: 232 ET----YDYGGFTMMFDDRRGRPVG 252
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 45 LAGAVIGKGGSTINDFQSQSGARIQLSRSHEFFPGTTDRIIMISGTIDEILRA 97
LAG++IGKGG I + +SGA I++ E G+ DRII I+GT D+I A
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKID---EPLEGSEDRIITITGTQDQIQNA 447
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 125 RLIVPNSSCGSIIGKAGATIKSFMDDSQAVIKISRLDHSYYGLNDRLVTLTGTLDEQMRA 184
++ +P GSIIGK G IK +S A IKI D G DR++T+TGT D+ A
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNA 447
Query: 185 LELI 188
L+
Sbjct: 448 QYLL 451
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,912,803
Number of Sequences: 539616
Number of extensions: 4790903
Number of successful extensions: 15235
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 14647
Number of HSP's gapped (non-prelim): 421
length of query: 291
length of database: 191,569,459
effective HSP length: 116
effective length of query: 175
effective length of database: 128,974,003
effective search space: 22570450525
effective search space used: 22570450525
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)