BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022844
(291 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidopsis thaliana
GN=ACX4 PE=1 SV=1
Length = 436
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 225/283 (79%), Positives = 249/283 (87%)
Query: 1 MTIHSSKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQ 60
M + SS + +K +SSYF+LP +++SVAFPQATPAS FPPC SDYY F+DLLT EEQ
Sbjct: 1 MAVLSSADRASNEKKVKSSYFDLPPMEMSVAFPQATPASTFPPCTSDYYHFNDLLTPEEQ 60
Query: 61 AVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAI 120
A+R KVRECMEKE+APIM EYWEKAEFPFH+ PKLGA+ VAGG+IKGYGCPG S+T AI
Sbjct: 61 AIRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIKGYGCPGLSITANAI 120
Query: 121 AIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYG 180
A AEIARVDASCSTFILVHSSL MLTIALCGSE QK+KYLPSLAQLNT+ACWALTEP G
Sbjct: 121 ATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNG 180
Query: 181 SDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLT 240
SDAS L TTATKVEGGW + GQKRWIGNSTFAD+L+IFARNTTTNQING++VKKDAPGL
Sbjct: 181 SDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNTTTNQINGFIVKKDAPGLK 240
Query: 241 VTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
TKI NKIGLR+VQNGDILL+ VFVPDEDRLPGVNSFQDTSKV
Sbjct: 241 ATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVNSFQDTSKV 283
>sp|Q20772|GCDH_CAEEL Probable glutaryl-CoA dehydrogenase, mitochondrial
OS=Caenorhabditis elegans GN=F54D5.7 PE=1 SV=1
Length = 409
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 134/235 (57%), Gaps = 3/235 (1%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D +Q D LT +E+++ + RE ++ + P + E + +F +IP++G++ + G +
Sbjct: 24 DAFQLSDQLTEDERSLMLSAREYCQERLLPRVTEAYRTEKFDPSLIPEMGSMGLLGAPYQ 83
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S G + E+ RVD+ + + V +SL + I GSE+QKQKY+P LA
Sbjct: 84 GYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLASG 143
Query: 167 NTIACWALTEPAYGSDASALNTTAT--KVEGGWILEGQKRWIGNSTFADVLVIFARNTT- 223
I C+ LTEP +GS+ + T AT + + L G K WI NS +DV+V++AR+
Sbjct: 144 KKIGCFGLTEPNHGSNPGGMETKATWDETTKTYKLNGSKTWISNSPVSDVMVVWARSARH 203
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQ 278
N+I G+++++ GLT KIE K+ LR G I + V VP+E+ LP Q
Sbjct: 204 NNKIKGFILERGMKGLTTPKIEGKLSLRASITGQIAMDDVPVPEENLLPNAEGLQ 258
>sp|Q2KHZ9|GCDH_BOVIN Glutaryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=GCDH
PE=2 SV=1
Length = 438
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 126/229 (55%), Gaps = 3/229 (1%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGC 110
++ LT++E +R R ++ + P + F +I ++G L + G TI+GY C
Sbjct: 56 LEEQLTADEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGMLGPTIQGYSC 115
Query: 111 PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170
G S + E+ RVD+ + + V SSL M I GSEEQKQKYLP LA+ +
Sbjct: 116 AGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMYPIYAYGSEEQKQKYLPRLAKGELLG 175
Query: 171 CWALTEPAYGSDASALNTTATK--VEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQIN 228
C+ LTEP +GSD S + T A +IL G K WI NS AD+L+++AR + I
Sbjct: 176 CFGLTEPNHGSDPSGMETRARHNPSSRSYILSGSKTWITNSPVADLLIVWAR-CEDSCIR 234
Query: 229 GYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
G+L++K GL+ +IE K LR G I++ V VP+E+ LPGV+
Sbjct: 235 GFLLEKGMRGLSTPRIEGKFSLRASSTGMIIMDDVEVPEENVLPGVSGL 283
>sp|Q60759|GCDH_MOUSE Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Gcdh
PE=2 SV=2
Length = 438
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 133/249 (53%), Gaps = 7/249 (2%)
Query: 34 QATPASKFPPCA--SDYYQFDDLLTSEEQAVRMKVRE-CMEKEIAPIMAEYWEKAEFPFH 90
Q PA P D ++ LT++E+ +R R C E+ ++ I+ + F
Sbjct: 37 QIRPAKSSRPVFDWKDPLILEEQLTADEKLIRDTFRNYCQERLMSRILLANRNEV-FHRD 95
Query: 91 VIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALC 150
++ ++G L V G TIKGYGC G S + E+ RVD+ + + V SSL M I
Sbjct: 96 IVYEMGELGVLGPTIKGYGCAGVSSVAYGLLTRELERVDSGYRSMMSVQSSLVMHPIYTY 155
Query: 151 GSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATK--VEGGWILEGQKRWIGN 208
GSEEQ+QKYLP LA+ + C+ LTEP +GSD + T A + L G K WI N
Sbjct: 156 GSEEQRQKYLPGLAKGELLGCFGLTEPNHGSDPGGMETRARHNPSNQSYTLSGTKTWITN 215
Query: 209 STFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDE 268
S AD+ +++AR N I G++++K GL+ +IE K LR G I++ V VP+E
Sbjct: 216 SPVADLFIVWAR-CEDNCIRGFILEKGMRGLSAPRIEGKFSLRASATGMIIMDSVEVPEE 274
Query: 269 DRLPGVNSF 277
+ LP V+S
Sbjct: 275 NVLPNVSSL 283
>sp|Q8HXX8|GCDH_MACFA Glutaryl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis
GN=GCDH PE=2 SV=1
Length = 438
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 124/229 (54%), Gaps = 3/229 (1%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGC 110
++ LT++E +R R ++ + P + F +I ++G L V G TIKGYGC
Sbjct: 56 LEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISQMGELGVLGPTIKGYGC 115
Query: 111 PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170
G S + E+ RVD+ + + V S L M I GSEEQ+QKYLP LA+ +
Sbjct: 116 AGVSSVAYGLLARELERVDSGYRSAMSVQSPLVMHPIYAYGSEEQRQKYLPRLAKGELLG 175
Query: 171 CWALTEPAYGSDASALNTTA--TKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQIN 228
C+ LTEP GSD S++ T A + L G K WI NS AD+ V++AR +I
Sbjct: 176 CFGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWAR-CEDGRIR 234
Query: 229 GYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
G+L++K GL+ +I+ K LR G I++ V VP+E+ LPG +S
Sbjct: 235 GFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENMLPGASSL 283
>sp|Q92947|GCDH_HUMAN Glutaryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=GCDH
PE=1 SV=1
Length = 438
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 124/229 (54%), Gaps = 3/229 (1%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGC 110
++ LT++E +R R ++ + P + F +I ++G L V G TIKGYGC
Sbjct: 56 LEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKGYGC 115
Query: 111 PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170
G S + E+ RVD+ + + V SSL M I GSEEQ+QKYLP LA+ +
Sbjct: 116 AGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLG 175
Query: 171 CWALTEPAYGSDASALNTTA--TKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQIN 228
C+ LTEP GSD S++ T A + L G K WI NS AD+ V++AR I
Sbjct: 176 CFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWAR-CEDGCIR 234
Query: 229 GYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
G+L++K GL+ +I+ K LR G I++ V VP+E+ LPG +S
Sbjct: 235 GFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGASSL 283
>sp|P81140|GCDH_PIG Glutaryl-CoA dehydrogenase, mitochondrial (Fragment) OS=Sus scrofa
GN=GCDH PE=1 SV=1
Length = 408
Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 124/230 (53%), Gaps = 4/230 (1%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGC 110
++ LT++E +R R ++ + P + F +I ++G L V G TIKGYGC
Sbjct: 25 LEEQLTADEILIRDTFRTYCQEHLMPRIVLANRNEVFHREIISEMGELGVLGPTIKGYGC 84
Query: 111 PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEE-QKQKYLPSLAQLNTI 169
G S + E+ RVD+ + + V SSL M I GSEE Q+QKYLP LA+ +
Sbjct: 85 AGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQQQQKYLPRLAKGELL 144
Query: 170 ACWALTEPAYGSDASALNTTA--TKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQI 227
C+ LTEP +GSD ++ T A + L G K WI NS AD+ V++AR N I
Sbjct: 145 GCFGLTEPNHGSDPGSMETRALHNPSNRSYTLNGAKTWITNSPVADLFVVWAR-CEDNCI 203
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSF 277
G+L++K GL+ KIE K LR G I++ V VP+E+ LP +S
Sbjct: 204 RGFLLEKGMRGLSAPKIEGKFSLRASATGMIIMDDVEVPEENVLPKASSL 253
>sp|P45857|ACDB_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgC
PE=2 SV=3
Length = 379
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 126/222 (56%), Gaps = 6/222 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKA-EFPFHVIPKLGALRVAGGTI-KGYGCPG 112
+T E+ +R VR+ KEIAP AE EK EFPF +I K+G + G + + YG G
Sbjct: 3 VTQEQVMMRKMVRDFARKEIAP-AAEIMEKTDEFPFQLIKKMGKHGLMGIPVPEQYGGAG 61
Query: 113 HSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACW 172
V +AI EI+R+ A+ + VH+S+ I G+EEQK KY+P+LA + + +
Sbjct: 62 ADVVSYILAIHEISRISAAVGVILSVHTSVGTNPILYFGNEEQKMKYIPNLASGDHLGAF 121
Query: 173 ALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---NTTTNQING 229
ALTEP GSDA +L TTA K G ++L G K +I N AD+ + FA + + I+
Sbjct: 122 ALTEPHSGSDAGSLRTTAIKKNGKYLLNGSKIFITNGGAADIYITFALTAPDQGRHGISA 181
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
++V+K+ PG TV K E K+GL +++ VP+ + L
Sbjct: 182 FIVEKNTPGFTVGKKERKLGLYGSNTTELIFDNAEVPEANLL 223
>sp|P52042|ACDS_CLOAB Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=bcd PE=3 SV=1
Length = 379
Score = 131 bits (329), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 4/221 (1%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
LT E++ VR VRE E E+ PI AE E FP + K+G + G K YG G
Sbjct: 5 LTREQELVRQMVREFAENEVKPIAAEIDETERFPMENVKKMGQYGMMGIPFSKEYGGAGG 64
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
V IA+ E+++V + + H+SL I G+EEQKQKYL LA+ I +
Sbjct: 65 DVLSYIIAVEELSKVCGTTGVILSAHTSLCASLINEHGTEEQKQKYLVPLAKGEKIGAYG 124
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA---RNTTTNQINGY 230
LTEP G+D+ A T A +++ G K +I N AD VIFA R T I+ +
Sbjct: 125 LTEPNAGTDSGAQQTVAVLEGDHYVINGSKIFITNGGVADTFVIFAMTDRTKGTKGISAF 184
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
+++K G ++ K+E K+G+R +++ + + VP E+ +
Sbjct: 185 IIEKGFKGFSIGKVEQKLGIRASSTTELVFEDMIVPVENMI 225
>sp|Q54R47|GCDH_DICDI Glutaryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium
discoideum GN=gcdh PE=3 SV=1
Length = 420
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 125/249 (50%), Gaps = 6/249 (2%)
Query: 31 AFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH 90
+F P KF +D + LLT EE +R +V + + E+ P + + +F
Sbjct: 27 SFGTIVPGDKFE--WNDPLSLESLLTEEEVMIRDQVNKFCQDELMPRIQMAYRDEKFDRE 84
Query: 91 VIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALC 150
++ + G + + G TI YG H G + + +VD+ + + V SSL M I
Sbjct: 85 IMREYGKMGMLGATIPAYGGVSHVAYG--LMANAVEKVDSGYRSAMSVQSSLVMHPINTF 142
Query: 151 GSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNS 209
G++ QK KYL LA + + C+ LTEP GSD + + T A K G ++L G K WI NS
Sbjct: 143 GTDAQKSKYLDGLASGDLVGCFGLTEPNAGSDPAGMQTRAVKNSAGNYVLNGTKTWITNS 202
Query: 210 TFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDED 269
ADV V++A+ I G++++K GL+ KIE K+ LR G I+++ V VP
Sbjct: 203 PIADVFVVWAK-VENGDIRGFVLEKGMKGLSAPKIEGKLSLRASITGMIVMEDVEVPPTA 261
Query: 270 RLPGVNSFQ 278
P V +
Sbjct: 262 MFPEVKGLR 270
>sp|P15651|ACADS_RAT Short-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acads PE=1 SV=2
Length = 412
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 119/227 (52%), Gaps = 6/227 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L Q +R R+ EKE+ PI A+ ++ FP + K+G L + + + G
Sbjct: 34 LPETHQMLRQTCRDFAEKELVPIAAQLDKEHLFPTSQVKKMGELGLLAMDVPEELSGAGL 93
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+IA+ EI+R AS + V++SL + I GS +QKQ+++ + I C+A
Sbjct: 94 DYLAYSIALEEISRGCASTGVIMSVNNSLYLGPILKFGSSQQKQQWITPFTNGDKIGCFA 153
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ---INGY 230
L+EP GSDA A +TTA + W+L G K WI NS A V+FA + Q I+ +
Sbjct: 154 LSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAF 213
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--PGVN 275
LV PGLT+ K E+K+G+R +++ + +P E+ L PG+
Sbjct: 214 LVPMPTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKENLLGEPGMG 260
>sp|Q07417|ACADS_MOUSE Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acads PE=2 SV=2
Length = 412
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 118/227 (51%), Gaps = 6/227 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L Q +R R+ EKE+ PI A+ + FP + K+G L + + + G
Sbjct: 34 LPETHQMLRQTCRDFAEKELVPIAAQLDREHLFPTAQVKKMGELGLLAMDVPEELSGAGL 93
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+IA+ EI+R AS + V++SL + I GS +QKQ+++ + I C+A
Sbjct: 94 DYLAYSIALEEISRACASTGVIMSVNNSLYLGPILKFGSAQQKQQWITPFTNGDKIGCFA 153
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ---INGY 230
L+EP GSDA A +TTA + W+L G K WI NS A V+FA + Q I+ +
Sbjct: 154 LSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAF 213
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--PGVN 275
LV PGLT+ K E+K+G+R +++ + +P E+ L PG+
Sbjct: 214 LVPMPTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKENLLGEPGMG 260
>sp|Q5RAS0|ACADS_PONAB Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo
abelii GN=ACADS PE=2 SV=1
Length = 412
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 117/227 (51%), Gaps = 6/227 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L Q + R+ EKE+ PI A+ ++ FP + K+G L + + + G G
Sbjct: 34 LPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGL 93
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
AIA+ EI+R AS + V++SL + I GS+EQKQK++ + I C+A
Sbjct: 94 DYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSGDKIGCFA 153
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA---RNTTTNQINGY 230
L+EP GSDA A +TTA W+L G K WI N+ A V+FA R I+ +
Sbjct: 154 LSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAF 213
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--PGVN 275
LV PGLT+ K E+K+G+R +++ + +P + L PG+
Sbjct: 214 LVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMG 260
>sp|P63427|ACDP_MYCTU Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium
tuberculosis GN=fadE25 PE=3 SV=1
Length = 389
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 113/223 (50%), Gaps = 6/223 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L E +R +R EKEIAP AE EKA FP + L + I + YG G
Sbjct: 15 LPEEHDEMRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFNAVHIPEEYGGQGA 74
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
I I E+ARVDAS S V+ L + + L GSEE K++ LP+LA +A +A
Sbjct: 75 DSVATCIVIEEVARVDASASLIPAVNK-LGTMGLILRGSEELKKQVLPALAAEGAMASYA 133
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWI---GNSTFADVLVIFARNTTTNQINGY 230
L+E GSDA+++ T A WIL G K WI G ST+ V+ + + N I+ +
Sbjct: 134 LSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISAF 193
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
+V KD G TV E K+G++ ++ + +P DR+ G
Sbjct: 194 MVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPG-DRIIG 235
>sp|P63428|ACDP_MYCBO Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=fadE25 PE=3 SV=1
Length = 389
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 113/223 (50%), Gaps = 6/223 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L E +R +R EKEIAP AE EKA FP + L + I + YG G
Sbjct: 15 LPEEHDEMRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFNAVHIPEEYGGQGA 74
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
I I E+ARVDAS S V+ L + + L GSEE K++ LP+LA +A +A
Sbjct: 75 DSVATCIVIEEVARVDASASLIPAVNK-LGTMGLILRGSEELKKQVLPALAAEGAMASYA 133
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWI---GNSTFADVLVIFARNTTTNQINGY 230
L+E GSDA+++ T A WIL G K WI G ST+ V+ + + N I+ +
Sbjct: 134 LSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISAF 193
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
+V KD G TV E K+G++ ++ + +P DR+ G
Sbjct: 194 MVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPG-DRIIG 235
>sp|O34421|ACDC_BACSU Probable acyl-CoA dehydrogenase YngJ OS=Bacillus subtilis (strain
168) GN=yngJ PE=3 SV=1
Length = 380
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 112/233 (48%), Gaps = 11/233 (4%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
LT E+Q VR V++ +KEIAP + EFP K+G L + G + YG G
Sbjct: 5 LTKEQQMVREMVKDFAKKEIAPHAEHVDQTGEFPMQTFKKMGELGLMGIPFPEEYGGSGG 64
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
A+A+ E+ + S SL + G+EEQKQ +L LA + +
Sbjct: 65 DTISYALAVEEVGKACGSTGLSYAAAVSLGASPLYYFGTEEQKQTHLTPLASGTALGSFG 124
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA----RNTTTNQING 229
LTEP GSDA T A +++ G+K WI N+++A +++ A N I+
Sbjct: 125 LTEPNAGSDAGGTQTKAISNGDEYVINGEKCWITNASYARTVIVTAVTGKNKDGKNIISA 184
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK 282
+V D PGLT+T +K+G+R +ILL+ V R+P N D +K
Sbjct: 185 LIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDV------RVPAANLLGDPTK 231
>sp|P46703|ACDP_MYCLE Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae
(strain TN) GN=fadE25 PE=3 SV=1
Length = 389
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 114/223 (51%), Gaps = 6/223 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L E +R +R EKEIAP A+ ++A FP + L A + + YG G
Sbjct: 15 LPEEHNELRATIRALAEKEIAPHAADVDQRARFPEEALAALNASGFNAIHVPEEYGGQGA 74
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
A I I E+ARVDAS S V+ L + + L GSEE K++ LPSLA +A +A
Sbjct: 75 DSVAACIVIEEVARVDASASLIPAVNK-LGTMGLILRGSEELKKQVLPSLAAEGAMASYA 133
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWI---GNSTFADVLVIFARNTTTNQINGY 230
L+E GSDA+++ T A WIL G K WI G ST+ V+ + + N I+ +
Sbjct: 134 LSEREAGSDAASMRTRAKADGDDWILNGFKCWITNGGKSTWYTVMAVTDPDKGANGISAF 193
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
+V KD G ++ E K+G++ ++ K +P DR+ G
Sbjct: 194 IVHKDDEGFSIGPKEKKLGIKGSPTTELYFDKCRIPG-DRIIG 235
>sp|P16219|ACADS_HUMAN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADS PE=1 SV=1
Length = 412
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 121/243 (49%), Gaps = 11/243 (4%)
Query: 44 CASDYYQFDDLLTSEE-----QAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
C + Q + S E Q + R+ EKE+ PI A+ ++ FP + K+G L
Sbjct: 18 CPRAWRQLHTIYQSVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGL 77
Query: 99 RVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
+ + + G G AIA+ EI+R AS + V++SL + I GS+EQKQ
Sbjct: 78 GLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQ 137
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
++ + I C+AL+EP GSDA A +TTA W+L G K WI N+ A V+
Sbjct: 138 AWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVV 197
Query: 218 FA---RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--P 272
FA R I+ +LV PGLT+ K E+K+G+R +++ + +P + L P
Sbjct: 198 FASTDRALQNKGISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEP 257
Query: 273 GVN 275
G+
Sbjct: 258 GMG 260
>sp|O32176|FADE_BACSU Probable acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168)
GN=fadE PE=2 SV=1
Length = 594
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 8/222 (3%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHV--IPKLGALRVAGGTI-KGYGCP 111
T E + + + +E+++ P + + E +F V + K G L + G + + YG
Sbjct: 30 FTDEHKMIAKTTEDYIEQDVLPHIDD-IENHQFEHSVRLLKKAGELGLLGADVPEEYGGL 88
Query: 112 GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIAC 171
G +A+ + +R S S H + L I GSEEQK+KYLP LA IA
Sbjct: 89 GLDKISSALITEKFSRA-GSFSLSYGAHVGIGSLPIVFFGSEEQKKKYLPGLASGEKIAA 147
Query: 172 WALTEPAYGSDASALNTTATKVEGG--WILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
+ALTEP GSDA TTA E G ++L G+K+WI NS FADV V++A+ ++ +
Sbjct: 148 YALTEPGSGSDALGAKTTAVLNEAGTHYVLTGEKQWITNSAFADVFVVYAK-VDGDKFSA 206
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
++V+K+ PG++ E K+G++ ++L + VP E+ L
Sbjct: 207 FIVEKEFPGVSTGPEEKKMGIKGSSTRTLILDQAEVPKENLL 248
>sp|Q5RF40|ACDSB_PONAB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Pongo abelii GN=ACADSB PE=2 SV=1
Length = 432
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 123/259 (47%), Gaps = 20/259 (7%)
Query: 32 FPQATPASKFPPCASDYYQFDDLL---------------TSEEQAVRMKVRECMEKEIAP 76
FP + K PP S Q + LL T EE ++ V++ +++IAP
Sbjct: 19 FPTCLSSWKIPPHVSKSSQSEALLNITNNGIHFAPLQTFTDEEMMIKSSVKKFAQEQIAP 78
Query: 77 IMAEYWEKAEFPFHVIPKLGALRVAGGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTF 135
+++ E ++ VI L + G + YG G S + I E+A+VDAS + F
Sbjct: 79 LVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVF 138
Query: 136 ILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEG 195
+ ++L I G+EEQK YLP L + + L+E GSD+ AL T A K
Sbjct: 139 CEIQNTLINTLIRKHGTEEQKGTYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRADKEGD 197
Query: 196 GWILEGQKRWIGNSTFADVLVIFARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRI 252
++L G K WI ++ A + ++ A T I +LV +D PGL + K ENK+GLR
Sbjct: 198 YYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRA 257
Query: 253 VQNGDILLKKVFVPDEDRL 271
+ + V VP+ + L
Sbjct: 258 SSTCPLTFENVKVPETNIL 276
>sp|P45867|ACDA_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=acdA
PE=2 SV=1
Length = 379
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 4/221 (1%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L+ E + +R VR+ + E+AP AE E+ F + ++ L + G + YG G
Sbjct: 5 LSEEHEMIRKLVRDFAKHEVAPTAAERDEQERFDRELFREMANLGLTGIPWPEDYGGIGS 64
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
IA+ E+++V AS + H SL + G+EEQK +YL LA I +A
Sbjct: 65 DYLAYVIAVEELSKVCASTGVTLSAHISLCSWPLFAFGTEEQKTEYLTQLALGEKIGAFA 124
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING---Y 230
LTE GSDA ++ TTA ++ ++L G K +I N AD+ ++FA + G +
Sbjct: 125 LTEAGSGSDAGSMKTTAERIGDDYVLNGSKVFITNGGVADIYIVFAVTDPEKKKKGVTAF 184
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
+V+KD G K E K+G+R +I+ + VP RL
Sbjct: 185 IVEKDFEGFFTGKKEKKLGIRSSPTTEIMFEDCVVPASKRL 225
>sp|P45954|ACDSB_HUMAN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Homo sapiens GN=ACADSB PE=1 SV=1
Length = 432
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 120/251 (47%), Gaps = 20/251 (7%)
Query: 40 KFPPCASDYYQFDDLL---------------TSEEQAVRMKVRECMEKEIAPIMAEYWEK 84
K PP S Q + LL T EE ++ V++ +++IAP+++ E
Sbjct: 27 KIPPHVSKSSQSEALLNITNNGIHFAPLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDEN 86
Query: 85 AEFPFHVIPKLGALRVAGGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLA 143
++ VI L + G + YG G S + I E+A+VDAS + F + ++L
Sbjct: 87 SKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLI 146
Query: 144 MLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQK 203
I G+EEQK YLP L + + L+E GSD+ AL T A K ++L G K
Sbjct: 147 NTLIRKHGTEEQKATYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSK 205
Query: 204 RWIGNSTFADVLVIFARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILL 260
WI ++ A + ++ A T I +LV +D PGL + K ENK+GLR +
Sbjct: 206 MWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTF 265
Query: 261 KKVFVPDEDRL 271
+ V VP+ + L
Sbjct: 266 ENVKVPEANIL 276
>sp|Q54IM8|ACAD8_DICDI Isobutyryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium
discoideum GN=acad8 PE=3 SV=1
Length = 416
Score = 107 bits (268), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 108/200 (54%), Gaps = 7/200 (3%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAE-FPFHVIPKLGALRVAGGTIK-GYGCPG 112
LT +++ + + ++++ P AE W+K E FP V+ + L G ++ G G
Sbjct: 39 LTEDQKQFQSMALDFAQEKMKPF-AEKWDKEEYFPRDVMREAAELGFGGIYVREDVGGSG 97
Query: 113 HSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACW 172
S A+I I +A D S + FI +H+ A L I + G+EEQ++K+LPSL + IA +
Sbjct: 98 LSRLDASIIIEALASADVSTTAFISIHNMCAGL-IDIYGTEEQRKKFLPSLVSMEKIASY 156
Query: 173 ALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING--- 229
LTEP GSDA +L+T ATK +IL G K +I ++V ++ R G
Sbjct: 157 CLTEPGSGSDAGSLSTKATKDGDHYILNGSKAFISGGGDSEVYLVMVRTGAEKGPKGISC 216
Query: 230 YLVKKDAPGLTVTKIENKIG 249
LV+KD PGL+ K E K+G
Sbjct: 217 LLVEKDTPGLSFGKKEEKLG 236
>sp|Q8JZN5|ACAD9_MOUSE Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Mus
musculus GN=Acad9 PE=2 SV=2
Length = 625
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 111/202 (54%), Gaps = 11/202 (5%)
Query: 83 EKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 141
++ + P + KL +L + G + + YG G S T A + EI +DAS + + H +
Sbjct: 93 QEGKIPVDTLEKLKSLGLFGIQVPEEYGGLGLSNTMYA-RLGEIISLDASITVTLAAHQA 151
Query: 142 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG--WIL 199
+ + I L G+EEQK KYLP L+ IA + LTEPA GSDA+++ T AT E +IL
Sbjct: 152 IGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKKYFIL 211
Query: 200 EGQKRWIGNSTFADVLVIFAR-------NTTTNQINGYLVKKDAPGLTVTKIENKIGLRI 252
G K WI N A++ +FA+ + T+++ ++V++D G+T K E+K+G+R
Sbjct: 212 NGSKVWITNGGLANIFTVFAKTEVVDSDGSKTDKMTAFIVERDFGGITNGKPEDKLGIRG 271
Query: 253 VQNGDILLKKVFVPDEDRLPGV 274
++ + VP E+ L V
Sbjct: 272 SNTCEVHFENTRVPVENVLGEV 293
>sp|Q3ZBF6|ACADS_BOVIN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos
taurus GN=ACADS PE=2 SV=1
Length = 412
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 118/227 (51%), Gaps = 6/227 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L Q +R R+ EKE+ PI A+ ++ FP + K+G L + + + G
Sbjct: 34 LPETHQMLRQTCRDFAEKELFPIAAQVDKEHRFPAAQVKKMGELGLMAMNVPEELSGAGL 93
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+IA+ EI+R AS + V++SL + I G++EQKQ+++ + I C+A
Sbjct: 94 DYLAYSIAMEEISRGCASTGVIMSVNNSLYLGPILKFGTKEQKQQWVAPFTSGDKIGCFA 153
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA---RNTTTNQINGY 230
L+EP GSDA A TTA W+L G K WI N+ A +V+FA R+ I+ +
Sbjct: 154 LSEPGNGSDAGAAATTARADGDSWVLSGTKAWITNAWEASAVVVFASTDRSLHNKGISAF 213
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--PGVN 275
LV PGLT+ K E+K+G+R +++ + +P + L PG+
Sbjct: 214 LVPMPTPGLTLGKKEDKLGIRASSTANLIFEDRRIPKDSLLGEPGLG 260
>sp|P79273|ACADS_PIG Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADS PE=2 SV=1
Length = 413
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 6/222 (2%)
Query: 60 QAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGA 118
Q +R R+ EKE+ PI A+ ++ FP + K+G L + + + G
Sbjct: 39 QMLRQTCRDFAEKELVPIAAQVDKEHRFPEAQVKKMGELGLMAMDVPEELSGAGLDYLAY 98
Query: 119 AIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPA 178
IA+ EI+R AS + V++ L + I GS+EQKQ+++ + + C+AL+EP
Sbjct: 99 TIAMEEISRGCASTGVIMSVNNFLYLGPILKFGSKEQKQQWITPFTSGDKVGCFALSEPG 158
Query: 179 YGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA---RNTTTNQINGYLVKKD 235
GSDA A TTA W+L G K WI N+ A V+FA R+ I+ +LV
Sbjct: 159 NGSDAGAAATTAQADHDSWVLSGTKAWITNAWEASAAVVFASTDRSLQNKGISAFLVPMP 218
Query: 236 APGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--PGVN 275
GLT+ K E+K+G+R +++ + +P E+ L PG+
Sbjct: 219 TAGLTLGKKEDKLGIRASSTANLIFEDCRIPKENLLGEPGMG 260
>sp|Q9H845|ACAD9_HUMAN Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Homo
sapiens GN=ACAD9 PE=1 SV=1
Length = 621
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 109/202 (53%), Gaps = 11/202 (5%)
Query: 83 EKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 141
++ + P + KL +L + G + + YG G S T + + EI +D S + + H +
Sbjct: 89 QEGKIPDETLEKLKSLGLFGLQVPEEYGGLGFSNTMYS-RLGEIISMDGSITVTLAAHQA 147
Query: 142 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG--WIL 199
+ + I L G+EEQK KYLP LA IA + LTEPA GSDA+++ + AT E +IL
Sbjct: 148 IGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASIRSRATLSEDKKHYIL 207
Query: 200 EGQKRWIGNSTFADVLVIFAR-------NTTTNQINGYLVKKDAPGLTVTKIENKIGLRI 252
G K WI N A++ +FA+ + ++I ++V++D G+T K E+K+G+R
Sbjct: 208 NGSKVWITNGGLANIFTVFAKTEVVDSDGSVKDKITAFIVERDFGGVTNGKPEDKLGIRG 267
Query: 253 VQNGDILLKKVFVPDEDRLPGV 274
++ + +P E+ L V
Sbjct: 268 SNTCEVHFENTKIPVENILGEV 289
>sp|P12007|IVD_RAT Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus
GN=Ivd PE=1 SV=2
Length = 424
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 122/258 (47%), Gaps = 14/258 (5%)
Query: 17 RSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAP 76
R S + L L +A PQ A P D + L E++ +R + + +++ +AP
Sbjct: 11 RVSSWRLRPLPSPLAVPQR--AHSMLPVDDDI----NGLNEEQKQLRHTISKFVQENLAP 64
Query: 77 IMAEYWEKAEFP--FHVIPKLGALRVAGGTIK-GYGCPGHSVTGAAIAIAEIARVDASCS 133
E + +F +LG+L V G T YG G + + EI+R A+
Sbjct: 65 KAQEIDQSNDFKNLREFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASAAVG 124
Query: 134 TFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV 193
HS+L + I G+E QK+KYLP L I A++EP GSD ++ A K
Sbjct: 125 LSYGAHSNLCINQIVRNGNEAQKEKYLPKLISGEFIGALAMSEPNAGSDVVSMRLKAEKK 184
Query: 194 EGGWILEGQKRWIGNSTFADVLVIFARNTTT-----NQINGYLVKKDAPGLTVTKIENKI 248
++L G K WI N ADVLV++A+ T I ++V+KD PG + +K +K+
Sbjct: 185 GDHYVLNGNKFWITNGPDADVLVVYAKTDLTAVPASRGITAFIVEKDMPGFSTSKKLDKL 244
Query: 249 GLRIVQNGDILLKKVFVP 266
G+R +++ + VP
Sbjct: 245 GMRGSNTCELVFEDCKVP 262
>sp|Q9FS88|IVD1_SOLTU Isovaleryl-CoA dehydrogenase 1, mitochondrial OS=Solanum tuberosum
GN=IVD1 PE=2 SV=1
Length = 412
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 113/224 (50%), Gaps = 6/224 (2%)
Query: 54 LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGALRVAGGTI-KGYGC 110
LL ++ + V + ++ IAP + FP ++ +G + G T + YG
Sbjct: 33 LLDDTQKQFKESVAKFAQENIAPYAEKIDRTNSFPKEINLWKLMGDFNLHGITAPEEYGG 92
Query: 111 PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170
IA+ EI+R + + V S++ + + G+ +QKQKYLP L + I
Sbjct: 93 LNLGYLYHCIALEEISRASGAVAVSYGVQSNVCINQLVRNGTPDQKQKYLPKLISGDHIG 152
Query: 171 CWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT---NQI 227
A++EP GSD ++ A +V+GG++L G K W N A+ L+++A+ TT I
Sbjct: 153 ALAMSEPNAGSDVVSMKCRADRVDGGYVLNGNKMWCTNGPVANTLIVYAKTDTTAGSKGI 212
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
++++K+ PG + + +K+G+R +++ + FVP E+ L
Sbjct: 213 TAFIIEKEMPGFSTAQKLDKLGMRGSDTCELVFENCFVPKENVL 256
>sp|Q9VSA3|ACADM_DROME Probable medium-chain specific acyl-CoA dehydrogenase,
mitochondrial OS=Drosophila melanogaster GN=CG12262 PE=1
SV=1
Length = 419
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 122/260 (46%), Gaps = 18/260 (6%)
Query: 24 PALDISVAFPQATPA-SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYW 82
PAL V+ +A A S P + + +D L +E A R+ +EI P+ A+Y
Sbjct: 10 PALRQLVSQSRAYAAVSHVSPNGTSFALTEDQLQLQELA-----RKFTREEIIPVAAQYD 64
Query: 83 EKAEFPFHVIPKLGALRVAGGTIKG-YGCPGHSVTGAAIAIAEIARVDASCSTFI--LVH 139
+ E+P+ +I K L + I G V ++ E+A C+ + L
Sbjct: 65 KSGEYPWPIIKKAWELGLMNNHIPADIGGLDLDVFTTCLSAEELAY---GCTGIMTALEA 121
Query: 140 SSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWIL 199
S L + L G++EQK+KYL L + +A + +TEP GSD S + T A K W++
Sbjct: 122 SGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEWVI 181
Query: 200 EGQKRWIGNSTFADVLVIFARNT------TTNQINGYLVKKDAPGLTVTKIENKIGLRIV 253
GQK WI N A+ + AR + G++V++D+PGLT + E +G R
Sbjct: 182 NGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFIVERDSPGLTPGRKELNMGQRAS 241
Query: 254 QNGDILLKKVFVPDEDRLPG 273
I + V VP E+ L G
Sbjct: 242 DTRGITFEDVRVPKENVLIG 261
>sp|Q54RR5|ACDSB_DICDI Probable short/branched chain specific acyl-CoA dehydrogenase
OS=Dictyostelium discoideum GN=acadsb PE=3 SV=1
Length = 413
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 117/223 (52%), Gaps = 8/223 (3%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK-GYGCPGH 113
L+ EE ++ V +++ P++ E +E ++ L + + G I YG
Sbjct: 35 LSEEETLLKETVANFANEKVRPLVKVMDETSELNKGLLKDLFDMNLMGIDISDSYGGANM 94
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+ G+ IAI E+A+VD + S + V ++L I GS +Q++KYL LA NT+ +
Sbjct: 95 NFMGSIIAIEELAKVDPAISVIVDVQNTLVNNCINRYGSIQQREKYLSMLAT-NTVGSFC 153
Query: 174 LTEPAYGSDASALNTTATK-VEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ----IN 228
L+E GSDA AL T A + +G ++L G K+WI N+ A V ++ A N +Q I
Sbjct: 154 LSESGSGSDAFALATRAVRQSDGTFVLNGTKQWITNAKEAGVFIVMA-NVDPSQGYKGIT 212
Query: 229 GYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
++V+ + PGL + K E+K+G+R +++L V D L
Sbjct: 213 AFIVESNNPGLRIGKKEDKLGIRASSTCEVILDNCVVKPTDIL 255
>sp|Q3SZI8|IVD_BOVIN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=IVD
PE=2 SV=1
Length = 426
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGALRVAGGTIK-GYGCP 111
L E++ +R V + +++ +AP E + EF +LG L V G T YG
Sbjct: 45 LNEEQKQLRQTVAKFLQEHLAPQAQEIDQSNEFKNLREFWKQLGNLGVLGITAPVQYGGS 104
Query: 112 GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIAC 171
G + + EI+RV + HS+L + I G+E QK+KYLP L I
Sbjct: 105 GLGFLENVLVMEEISRVSGAVGLSYGAHSNLCINQIVRNGNETQKEKYLPKLISGEYIGA 164
Query: 172 WALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-----NQ 226
A++EP GSD ++ A K ++L G K WI N ADVLV++A+ T
Sbjct: 165 LAMSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADVLVVYAKTDVTAVPASRG 224
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVP 266
I ++V+K PG + +K +K+G+R +++ + VP
Sbjct: 225 ITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELVFEDCEVP 264
>sp|Q9FS87|IVD2_SOLTU Isovaleryl-CoA dehydrogenase 2, mitochondrial (Fragment) OS=Solanum
tuberosum GN=IVD2 PE=1 SV=1
Length = 401
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 120 IAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAY 179
IA+ EI+R S H++L + + G+ EQKQKYLP L + A++EP
Sbjct: 91 IAMEEISRASGSVGLSYGAHTNLCINQLVRNGTHEQKQKYLPKLISGEHVGALAMSEPDA 150
Query: 180 GSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT---NQINGYLVKKDA 236
GSD ++ A +VEGG++L G K W N A LV++A+ T I ++++K
Sbjct: 151 GSDVVSMKCKADRVEGGYVLNGNKMWCTNGPTAQTLVVYAKTDVTASSKGITAFIIEKGM 210
Query: 237 PGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV 274
G + + +K+G+R +++ + FVP+E+ L V
Sbjct: 211 TGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGQV 248
>sp|P45952|ACADM_MOUSE Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acadm PE=1 SV=1
Length = 421
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 111/230 (48%), Gaps = 8/230 (3%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
F LT +++ + R+ +EI P+ EY + E+PF +I + L + I + G
Sbjct: 37 FSFELTEQQKEFQATARKFAREEIIPVAPEYDKSGEYPFPLIKRAWELGLINAHIPESCG 96
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G A + E+A T I +S L + + L G+++QK+KYL + + +
Sbjct: 97 GLGLGTFDACLITEELAYGCTGVQTAIEANS-LGQMPVILAGNDQQKKKYLGRMTEQPMM 155
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT------T 223
+ +TEP+ GSD +A+ T A K +++ GQK WI N A+ + AR+
Sbjct: 156 CAYCVTEPSAGSDVAAIKTKAEKKGDEYVINGQKMWITNGGKANWYFLLARSNPDPKVPA 215
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
+ G++V+ D PG+ + K E +G R I + V VP E+ L G
Sbjct: 216 SKAFTGFIVEADTPGIHIGKKELNMGQRCSDTRGIAFEDVRVPKENVLIG 265
>sp|Q5EAD4|ACDSB_BOVIN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Bos taurus GN=ACADSB PE=2 SV=1
Length = 432
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 10/255 (3%)
Query: 25 ALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEK 84
AL+ S + Q S PP A T EE ++ V++ ++++AP +++ E
Sbjct: 32 ALNSSQSEAQLKATSNGPPLAPL-----QTFTDEEMMIKSAVKKFAQEQVAPFVSKMDED 86
Query: 85 AEFPFHVIPKLGALRVAGGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLA 143
++ VI L + G I YG G S + + I E+A+VDAS + + ++L
Sbjct: 87 SKMEKSVIQGLFQQGLMGIEIDTKYGGTGASFFSSVLVIEELAKVDASVALVCDIQNTLI 146
Query: 144 MLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQK 203
I G+EEQK YLP LA + ++E GSD+ A+ T A K +I+ G K
Sbjct: 147 NRMIGKYGTEEQKATYLPKLAT-EKASSICISETGAGSDSFAMKTRADKKGDYYIINGSK 205
Query: 204 RWIGNSTFADVLVIFARNTTTNQING---YLVKKDAPGLTVTKIENKIGLRIVQNGDILL 260
WI ++ A + V+ A + G +LV D GL V K ENK+G+R +
Sbjct: 206 MWISSAEIAGLFVVMANADFSAGYKGITCFLVDGDTEGLHVGKPENKLGIRASSTCPVTF 265
Query: 261 KKVFVPDEDRLPGVN 275
+ V VP + L V
Sbjct: 266 ENVKVPKTNILGQVG 280
>sp|Q9JHI5|IVD_MOUSE Isovaleryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Ivd
PE=1 SV=1
Length = 424
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 119/247 (48%), Gaps = 15/247 (6%)
Query: 52 DDL--LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGALRVAGGTIK- 106
DD+ L E++ +R + + +++ +AP E + +F +LG+L V G T
Sbjct: 38 DDINGLNEEQKQLRHTISKFLQENLAPKAQEIDQTNDFKNLREFWKQLGSLGVLGITAPV 97
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
YG G + + EI+R + HS+L + I G+E QK+KYLP L
Sbjct: 98 QYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCVNQIVRNGNEAQKEKYLPKLISG 157
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
I A++EP GSD ++ A K ++L G K WI N AD+LV++A+ T
Sbjct: 158 EFIGALAMSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADILVVYAKTDLTAV 217
Query: 225 ---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I ++V+K PG + +K +K+G+R +++ + VP + L Q++
Sbjct: 218 PASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELVFEDCKVPAANVLS-----QESK 272
Query: 282 KVRLLCS 288
V +L S
Sbjct: 273 GVYVLMS 279
>sp|Q5RBD5|IVD_PONAB Isovaleryl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=IVD
PE=2 SV=1
Length = 423
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 106/220 (48%), Gaps = 8/220 (3%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGALRVAGGTIK-GYGCP 111
L+ E++ +R V + +++ +AP E EF +LG L V G T YG
Sbjct: 42 LSEEQRQLRQTVAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGS 101
Query: 112 GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIAC 171
G + + EI+R + HS+L + + G+E QK+KYLP L I
Sbjct: 102 GLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGA 161
Query: 172 WALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT-----TTNQ 226
A++EP GSD ++ A K +IL G K WI N ADVL+++A+ +
Sbjct: 162 LAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRG 221
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVP 266
I ++V+K PG + +K +K+G+R +++ + VP
Sbjct: 222 ITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKVP 261
>sp|Q9SWG0|IVD_ARATH Isovaleryl-CoA dehydrogenase, mitochondrial OS=Arabidopsis thaliana
GN=IVD PE=1 SV=2
Length = 409
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 3/155 (1%)
Query: 120 IAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAY 179
IA+ EI+R S + HS+L + + G+ QK+KYLP L + A++EP
Sbjct: 99 IAMEEISRASGSVALSYGAHSNLCINQLVRNGTAAQKEKYLPKLISGEHVGALAMSEPNA 158
Query: 180 GSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT---TNQINGYLVKKDA 236
GSD + A KV+GG+IL G K W N A+ LV++A+ T + I ++++K
Sbjct: 159 GSDVVGMKCKAEKVDGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGITAFIIEKGM 218
Query: 237 PGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
G + + +K+G+R +++ + FVP+E+ L
Sbjct: 219 TGFSTAQKLDKLGMRGSDTCELVFENCFVPEENIL 253
>sp|P26440|IVD_HUMAN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=IVD
PE=1 SV=1
Length = 423
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 8/220 (3%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGALRVAGGTIK-GYGCP 111
L+ E++ +R + + +++ +AP E EF +LG L V G T YG
Sbjct: 42 LSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGS 101
Query: 112 GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIAC 171
G + + EI+R + HS+L + + G+E QK+KYLP L I
Sbjct: 102 GLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGA 161
Query: 172 WALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT-----TTNQ 226
A++EP GSD ++ A K +IL G K WI N ADVL+++A+ +
Sbjct: 162 LAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRG 221
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVP 266
I ++V+K PG + +K +K+G+R +++ + +P
Sbjct: 222 ITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIP 261
>sp|C3UVB0|ACD_DESML Glutaryl-CoA dehydrogenase OS=Desulfococcus multivorans GN=Acd PE=1
SV=1
Length = 389
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 115/229 (50%), Gaps = 11/229 (4%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH-VIPKLGALRVAGGTI-KGYGCPG 112
L+ E Q ++ +VR + K+I P ++ + FP+ + +G L G I + YG G
Sbjct: 5 LSKELQMLQKEVRNFVNKKIVPFADQWDNENHFPYEEAVRPMGELGFFGTVIPEEYGGEG 64
Query: 113 --HSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170
A I EIAR ++ + + TI GSE K+KY+P L+ +
Sbjct: 65 MDQGWLAAMIVTEEIARGSSALRVQLNMEVLGCAYTILTYGSEALKKKYVPKLSSAEFLG 124
Query: 171 CWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA---RNTTTNQI 227
+ +TEP GSD A+++TA W+L G K WI N+ ADVL+ +A + + +
Sbjct: 125 GFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTWISNAAQADVLIYYAYTDKAAGSRGL 184
Query: 228 NGYLVK-KDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--PG 273
+ ++++ ++ PG+ + +E K+G G++ L V VP E+ L PG
Sbjct: 185 SAFVIEPRNFPGIKTSNLE-KLGSHASPTGELFLDNVKVPKENILGKPG 232
>sp|Q9DBL1|ACDSB_MOUSE Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Mus musculus GN=Acadsb PE=1 SV=1
Length = 432
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 111/221 (50%), Gaps = 5/221 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKG-YGCPGH 113
LT EE ++ V++ ++ +AP+++ E ++ VI L + G ++ YG
Sbjct: 57 LTDEEIMMKQTVKKFAQEHVAPLVSSMDENSKMEKSVIQGLFQQGLMGIEVEAQYGGTEA 116
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
S + + I E+A+VDAS + + +++ SEEQK YLP L + +
Sbjct: 117 SFFCSVLVIEELAKVDASVALLCDIQNTIINNLFRKHASEEQKATYLPKLVT-EKLGSFC 175
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING---Y 230
L+E GSD+ A+ T A K ++L G K WI ++ A++ ++FA ++ G +
Sbjct: 176 LSEAGAGSDSFAMKTRADKSGNYYVLNGSKMWISHAEHAELFLVFANVDPSSGYRGITCF 235
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
LV +D G + K ENK+G+R + + V VP+ + L
Sbjct: 236 LVDRDTEGFQIGKRENKMGIRASSTCQLTFENVKVPETNIL 276
>sp|P41367|ACADM_PIG Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADM PE=1 SV=3
Length = 421
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 31 AFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH 90
A PQ P S F F+ LT +++ + R+ +EI P+ AEY E+P
Sbjct: 27 AVPQCEPGSGF--------SFE--LTEQQKEFQATARKFAREEIIPVAAEYDRTGEYPVP 76
Query: 91 VIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIAL 149
++ + L + I + +G G + + + E+A T I ++ L + + +
Sbjct: 77 LLKRAWELGLMNTHIPESFGGLGLGIIDSCLITEELAYGCTGVQTAIEANT-LGQVPLII 135
Query: 150 CGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNS 209
G+ +Q++KYL + + + + +TEP GSD + + T A K +I+ GQK WI N
Sbjct: 136 GGNYQQQKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNG 195
Query: 210 TFADVLVIFARNT------TTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKV 263
A+ + AR+ + G++V+ D PG+ + + E +G R I+ + V
Sbjct: 196 GKANWYFLLARSDPDPKAPASKAFTGFIVEADTPGVQIGRKEINMGQRCSDTRGIVFEDV 255
Query: 264 FVPDEDRLPG 273
VP E+ L G
Sbjct: 256 RVPKENVLTG 265
>sp|Q9UKU7|ACAD8_HUMAN Isobutyryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens
GN=ACAD8 PE=1 SV=1
Length = 415
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 5/219 (2%)
Query: 57 SEEQAVRMKVR-ECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK-GYGCPGHS 114
+EEQ KV + +E+AP MAE+ +K FP V+ K L G I+ G G S
Sbjct: 42 NEEQKEFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLS 101
Query: 115 VTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWAL 174
++ +A S + +I +H+ A + + G+EEQ+ K+ P L + A + L
Sbjct: 102 RLDTSVIFEALATGCTSTTAYISIHNMCAWMIDSF-GNEEQRHKFCPPLCTMEKFASYCL 160
Query: 175 TEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN--QINGYLV 232
TEP GSDA++L T+A K +IL G K +I + +D+ V+ R I+ +V
Sbjct: 161 TEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESDIYVVMCRTGGPGPKGISCIVV 220
Query: 233 KKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
+K PGL+ K E K+G ++ + VP +R+
Sbjct: 221 EKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRI 259
>sp|Q9D7B6|ACAD8_MOUSE Isobutyryl-CoA dehydrogenase, mitochondrial OS=Mus musculus
GN=Acad8 PE=2 SV=2
Length = 413
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 4/220 (1%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK-GYGCPGH 113
L E++ + + +E+AP MAE+ +K FP V+ K L G ++ G G
Sbjct: 39 LNEEQKGFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYVRTDVGGSGL 98
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
S ++ +A S + +I +H+ A + + G+EEQ+ K+ P L + A +
Sbjct: 99 SRLDTSVIFEALATGCTSTTAYISIHNMCAWMIDSF-GNEEQRHKFCPPLCTMEKFASYC 157
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR--NTTTNQINGYL 231
LTEP GSDA++L T+A + +IL G K +I +D+ V+ R + I+ +
Sbjct: 158 LTEPGSGSDAASLLTSAKQQGDHYILNGSKAFISGGGESDIYVVMCRTGGSGAKGISCIV 217
Query: 232 VKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
V+K PGL+ K E K+G ++ + VP +R+
Sbjct: 218 VEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRI 257
>sp|P70584|ACDSB_RAT Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadsb PE=1 SV=1
Length = 432
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 5/221 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKG-YGCPGH 113
T E+ ++ V++ +++IAP+++ E ++ VI L + G ++ YG
Sbjct: 57 FTDEDIMMQKAVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGMMGIEVEAKYGGTEA 116
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
S + + I E+A+VDAS + + +++ G+EEQK YLP L + +
Sbjct: 117 SFLCSVLVIEELAKVDASVALLCDIQNTVINKLFRKHGTEEQKATYLPKLVT-EKLGSFC 175
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING---Y 230
L+E GSD+ AL T A K +++ G K WI N+ A++ ++FA + G +
Sbjct: 176 LSEAGAGSDSFALKTRADKSGNYYVINGSKMWISNAEHAELFLVFANVDPPSGYRGITCF 235
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL 271
LV +D G + + ENK+G+R + + V VP+ L
Sbjct: 236 LVDRDTEGFQIGRRENKMGIRASSTCQLTFENVKVPETSVL 276
>sp|Q8HXY7|ACADV_MACFA Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Macaca fascicularis GN=ACADVL PE=2 SV=1
Length = 655
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 129 DASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNT 188
D + + H S+ I L G++ QK+KYLP LA T+A + LTEP+ GSDA+++ T
Sbjct: 171 DLAVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETLAAFCLTEPSSGSDAASIRT 230
Query: 189 TATKVEGG--WILEGQKRWIGNSTFADVLVIFARNTTTN--------QINGYLVKKDAPG 238
+A G + L G K WI N AD+ +FA+ T+ +I ++V++ G
Sbjct: 231 SAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGG 290
Query: 239 LTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS 276
+T E K+G++ ++L V VP E+ L V S
Sbjct: 291 VTHGPPEKKMGIKASNTAEVLFDGVRVPSENVLGEVGS 328
>sp|P08503|ACADM_RAT Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadm PE=1 SV=1
Length = 421
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 8/230 (3%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
F LT +++ + R+ +EI P+ +Y + E+PF +I + L + I + G
Sbjct: 37 FSFELTEQQKEFQTIARKFAREEIIPVAPDYDKSGEYPFPLIKRAWELGLINTHIPESCG 96
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G A + E+A T I +S L + + + G+++QK+KYL + + +
Sbjct: 97 GLGLGTFDACLITEELAYGCTGVQTAIEANS-LGQMPVIIAGNDQQKKKYLGRMTEQPMM 155
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT------T 223
+ +TEP+ GSD + + T A K +++ GQK WI N A+ + R+
Sbjct: 156 CAYCVTEPSAGSDVAGIKTKAEKKGDEYVINGQKMWITNGGKANWYFVLTRSNPDPKVPA 215
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
+ G++V+ D PG+ + K E +G R I + V VP E+ L G
Sbjct: 216 SKAFTGFIVEADTPGIHIGKKELNMGQRCSDTRGITFEDVRVPKENVLIG 265
>sp|P11310|ACADM_HUMAN Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADM PE=1 SV=1
Length = 421
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 8/230 (3%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
F T +++ + R+ +EI P+ AEY + E+P +I + L + I + G
Sbjct: 37 FSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCG 96
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G A + E+A T I +SL + I + G+++QK+KYL + + +
Sbjct: 97 GLGLGTFDACLISEELAYGCTGVQTAI-EGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLM 155
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT------T 223
+ +TEP GSD + + T A K +I+ GQK WI N A+ + AR+
Sbjct: 156 CAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPA 215
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
G++V+ D PG+ + + E +G R I+ + V VP E+ L G
Sbjct: 216 NKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIG 265
>sp|P49748|ACADV_HUMAN Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Homo sapiens GN=ACADVL PE=1 SV=1
Length = 655
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 129 DASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNT 188
D + H S+ I L G++ QK+KYLP LA T+A + LTEP+ GSDA+++ T
Sbjct: 171 DLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRT 230
Query: 189 TATKVEGG--WILEGQKRWIGNSTFADVLVIFARNTTTN--------QINGYLVKKDAPG 238
+A G + L G K WI N AD+ +FA+ T+ +I ++V++ G
Sbjct: 231 SAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGG 290
Query: 239 LTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS 276
+T E K+G++ ++ V VP E+ L V S
Sbjct: 291 ITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGS 328
>sp|A5A6I0|ACADM_PANTR Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pan
troglodytes GN=ACADM PE=2 SV=1
Length = 421
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 8/230 (3%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
F T +++ + R+ +EI P+ AEY + E+P +I + L + I + G
Sbjct: 37 FSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCG 96
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G A + E+A T I +SL + I + G+++QK+KYL + + +
Sbjct: 97 GLGLGTFDACLISEELAYGCTGVQTAI-EGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLM 155
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT------T 223
+ +TEP GSD + + T A K +I+ GQK WI N A+ + AR+
Sbjct: 156 CAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPA 215
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG 273
G++V+ D PG+ + + E +G R I+ + V VP E+ L G
Sbjct: 216 NKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPRENVLIG 265
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,783,996
Number of Sequences: 539616
Number of extensions: 4107134
Number of successful extensions: 9338
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 9034
Number of HSP's gapped (non-prelim): 186
length of query: 291
length of database: 191,569,459
effective HSP length: 116
effective length of query: 175
effective length of database: 128,974,003
effective search space: 22570450525
effective search space used: 22570450525
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)