Query 022849
Match_columns 291
No_of_seqs 118 out of 224
Neff 5.0
Searched_HMMs 13730
Date Mon Mar 25 12:11:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022849.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022849hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2gala_ b.29.1.3 (A:) Galectin 22.1 1.1E+02 0.0077 22.4 6.5 73 111-203 28-100 (133)
2 d2ay0a1 a.43.1.11 (A:3-45) Bif 17.3 4.8 0.00035 25.7 -2.2 27 150-177 9-37 (43)
3 d1l5aa1 c.43.1.2 (A:1-174) Vib 14.3 73 0.0054 23.4 3.9 20 120-139 16-35 (174)
4 d2gw6a1 c.52.2.1 (A:2-123) tRN 12.6 23 0.0017 27.0 0.2 67 55-135 56-122 (122)
5 d1lcla_ b.29.1.3 (A:) Charcot- 11.4 2.7E+02 0.02 20.2 6.5 71 112-203 34-104 (141)
6 d1a78a_ b.29.1.3 (A:) Galectin 9.0 3.3E+02 0.024 19.6 6.3 75 111-204 29-103 (134)
7 d1mg7a1 d.14.1.6 (A:14-187) Ea 8.9 55 0.004 25.9 1.3 72 145-218 19-95 (174)
8 d2fsra1 d.108.1.1 (A:4-167) Pr 8.7 66 0.0048 22.6 1.7 22 228-251 142-163 (164)
9 d2p02a3 d.130.1.1 (A:274-417) 5.7 1.2E+02 0.0084 23.3 1.8 36 202-237 39-76 (144)
10 d2voua2 d.16.1.2 (A:164-291) D 5.0 5.1E+02 0.037 18.0 5.3 50 113-167 39-93 (128)
No 1
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.12 E-value=1.1e+02 Score=22.41 Aligned_cols=73 Identities=15% Similarity=0.163 Sum_probs=46.3
Q ss_pred eEEEEEEEecCCCCceEEEEEeeCCCCCchhhHHHhhcCCccccccceeEEeeeccchhHHHHhhcCCCcccccceeeee
Q 022849 111 FIFAVNLQVPGKDQHSAVFYFATEDPIPLGSLLYRFVNGDDAFRNQRFKIVNRIVKGPWIVKKAVGNYSACLLGKALTCN 190 (291)
Q Consensus 111 f~fiVNlqlP~~~~~s~V~Yf~~~~~~~~~~Ll~rFl~gDd~fRn~RfKLIp~Vv~gpwiVr~aVG~~~~~llGk~l~~~ 190 (291)
.-|.|||+-+..++-.++|.|.+. | +...-.||+ -.+|.|=-..-.+.. |-.-|+..+..
T Consensus 28 ~~F~inl~~~~~~~~di~~Hfn~R-----------f-~~~~IV~Ns-------~~~g~Wg~Eer~~~~-Pf~~G~~F~l~ 87 (133)
T d2gala_ 28 SRFHVNLLCGEEQGSDAALHFNPR-----------L-DTSEVVFNS-------KEQGSWGREERGPGV-PFQRGQPFEVL 87 (133)
T ss_dssp CBEEEEEESSSSTTCCEEEEEEEE-----------T-TTTEEEEEE-------EETTEECCCEECSSC-CCCTTCEEEEE
T ss_pred CEEEEEEEeCCCCCCCEEEEEeeE-----------c-CCCEEEEEC-------CcCCeECCceEECCC-CCCCCCeeEEE
Confidence 358999998777677789999874 1 111112332 334556322222232 34568888888
Q ss_pred EeeCCCEEEEEEE
Q 022849 191 YHRGPNYLEIDVD 203 (291)
Q Consensus 191 y~~g~nYlEiDvD 203 (291)
...+.++|+|-||
T Consensus 88 I~~~~~~f~V~vn 100 (133)
T d2gala_ 88 IIASDDGFKAVVG 100 (133)
T ss_dssp EEECSSEEEEEET
T ss_pred EEECCCEEEEEEC
Confidence 8889999999887
No 2
>d2ay0a1 a.43.1.11 (A:3-45) Bifunctional protein putA {Escherichia coli [TaxId: 562]}
Probab=17.28 E-value=4.8 Score=25.73 Aligned_cols=27 Identities=33% Similarity=0.591 Sum_probs=21.1
Q ss_pred CccccccceeEEeeeccc--hhHHHHhhcC
Q 022849 150 DDAFRNQRFKIVNRIVKG--PWIVKKAVGN 177 (291)
Q Consensus 150 Dd~fRn~RfKLIp~Vv~g--pwiVr~aVG~ 177 (291)
||+-| +|+|-++...+= -||+|+|+-+
T Consensus 9 Dd~~r-~Ri~~lA~~~~RtpHWL~kqAI~~ 37 (43)
T d2ay0a1 9 DDATR-ERIKSAATRIDRTPHWLIKQAIFS 37 (43)
T ss_dssp CHHHH-HHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CHHHH-HHHHHHHHhcCCCHHHHHHHHHHH
Confidence 67777 899888888774 3999998744
No 3
>d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]}
Probab=14.33 E-value=73 Score=23.39 Aligned_cols=20 Identities=10% Similarity=0.223 Sum_probs=16.7
Q ss_pred cCCCCceEEEEEeeCCCCCc
Q 022849 120 PGKDQHSAVFYFATEDPIPL 139 (291)
Q Consensus 120 P~~~~~s~V~Yf~~~~~~~~ 139 (291)
|..+.||+..++.++.++..
T Consensus 16 p~~~~yni~~~~~i~g~ld~ 35 (174)
T d1l5aa1 16 PHINLDTVAHSLRLTGPLDT 35 (174)
T ss_dssp TTSCCSEEEEEEEEESSCCH
T ss_pred CCCCeeeccEEEEEcCCCCH
Confidence 67788999999999887754
No 4
>d2gw6a1 c.52.2.1 (A:2-123) tRNA-splicing endonuclease subunit Sen15 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.57 E-value=23 Score=27.02 Aligned_cols=67 Identities=16% Similarity=0.271 Sum_probs=39.8
Q ss_pred cccCCccccCCCCcceeeeeeeeecCCCccccccCCCcHHHHHHHHhhhcCCCCCceEEEEEEEecCCCCceEEEEEeeC
Q 022849 55 YFTKKQKSPAGDYLLLPIGMDWLRSTTKLDNVLARPDNRIAQALKKAQSQGKSLKSFIFAVNLQVPGKDQHSAVFYFATE 134 (291)
Q Consensus 55 Yl~dk~Kvps~~~l~~lvgvDlf~s~~ri~hIa~~~~~~~~~~l~~~~~~~~~~~pf~fiVNlqlP~~~~~s~V~Yf~~~ 134 (291)
||.-|+|.-++..++-++-++.=-+-.++..+-.. .-.+ .++...|..|++-|+=+. |-|.||+++
T Consensus 56 yL~gr~~~~~~~qv~iP~p~~~sls~~~i~~~~~~--------~~~p--~~~~~~~~s~tLai~d~D----STIvYYrmt 121 (122)
T d2gw6a1 56 CLVGTEIEGEGLQTVVPTPITASLSHNRIREILKA--------SRKL--QGDPDLPMSFTLAIVESD----STIVYYKLT 121 (122)
T ss_dssp EEEEESSTTCCCCEEEEEETTCEEEHHHHHHHHHH--------HHHH--TTCSSCCCEEEEEEECTT----SCEEEEEEE
T ss_pred EEEcccccCCCccEEEeeccccccCHHHHHHHHHh--------ccCC--cCCcCccceEEEEEEcCC----CeEEEEEcc
Confidence 66677777777788888777655454444443211 1111 223345556667777665 677888875
Q ss_pred C
Q 022849 135 D 135 (291)
Q Consensus 135 ~ 135 (291)
+
T Consensus 122 d 122 (122)
T d2gw6a1 122 D 122 (122)
T ss_dssp C
T ss_pred C
Confidence 3
No 5
>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.44 E-value=2.7e+02 Score=20.22 Aligned_cols=71 Identities=20% Similarity=0.317 Sum_probs=45.6
Q ss_pred EEEEEEEecCCCCceEEEEEeeCCCCCchhhHHHhhcCCccccccceeEEeeeccchhHHHHhhcCCCcccccceeeeeE
Q 022849 112 IFAVNLQVPGKDQHSAVFYFATEDPIPLGSLLYRFVNGDDAFRNQRFKIVNRIVKGPWIVKKAVGNYSACLLGKALTCNY 191 (291)
Q Consensus 112 ~fiVNlqlP~~~~~s~V~Yf~~~~~~~~~~Ll~rFl~gDd~fRn~RfKLIp~Vv~gpwiVr~aVG~~~~~llGk~l~~~y 191 (291)
-|.||+|....+.-.+.+.|... | . ++ =+...-.+|.|=-..-.++- |-.-|+..++..
T Consensus 34 ~F~inf~~~~~~~~di~lHfn~R-----------f-------~-~~-iV~Ns~~~g~Wg~Eer~~~~-Pf~~g~~F~l~I 92 (141)
T d1lcla_ 34 YLQVDFHTEMKEESDIVFHFQVC-----------F-------G-RR-VVMNSREYGAWKQQVESKNM-PFQDGQEFELSI 92 (141)
T ss_dssp EEEEEEESSSSTTSCEEEEEEEE-----------T-------T-TE-EEEEEEETTEECCCEEECCC-CCCTTCCEEEEE
T ss_pred EEEEEeEeCCCCCCCeEEEEEEc-----------C-------C-Ce-EEEECccCCCcCCceEEccc-cccCCCeEEEEE
Confidence 69999998666666799999873 2 0 11 23334455666321112222 345588888888
Q ss_pred eeCCCEEEEEEE
Q 022849 192 HRGPNYLEIDVD 203 (291)
Q Consensus 192 ~~g~nYlEiDvD 203 (291)
..++++++|.||
T Consensus 93 ~~~~~~f~V~vN 104 (141)
T d1lcla_ 93 SVLPDKYQVMVN 104 (141)
T ss_dssp EECSSEEEEEET
T ss_pred EECCCEEEEEEC
Confidence 888999998887
No 6
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]}
Probab=8.98 E-value=3.3e+02 Score=19.60 Aligned_cols=75 Identities=15% Similarity=0.116 Sum_probs=43.1
Q ss_pred eEEEEEEEecCCCCceEEEEEeeCCCCCchhhHHHhhcCCccccccceeEEeeeccchhHHHHhhcCCCcccccceeeee
Q 022849 111 FIFAVNLQVPGKDQHSAVFYFATEDPIPLGSLLYRFVNGDDAFRNQRFKIVNRIVKGPWIVKKAVGNYSACLLGKALTCN 190 (291)
Q Consensus 111 f~fiVNlqlP~~~~~s~V~Yf~~~~~~~~~~Ll~rFl~gDd~fRn~RfKLIp~Vv~gpwiVr~aVG~~~~~llGk~l~~~ 190 (291)
.-|.|||+-+.+ .+.+.|.++ |-.+. +++-=+...-.+|.|=-..-.+. .|---|++.++.
T Consensus 29 ~~F~INl~~~~~---dialHfn~R-----------F~~~~----~~~~IV~Ns~~~g~Wg~Eer~~~-~PF~~g~~F~i~ 89 (134)
T d1a78a_ 29 KGFAVNLGEDAS---NFLLHFNAR-----------FDLHG----DVNKIVCNSKEADAWGSEQREEV-FPFQQGAEVMVC 89 (134)
T ss_dssp SEEEEEEEEETT---EEEEEEEEE-----------EEETT----EEEEEEEEEEETTEECCCEEECC-CCCCTTSEEEEE
T ss_pred CEEEEEEEcCCC---CEEEEEEEe-----------eccCC----CCcEEEEeCCcCCCcCCcEEECC-ceEeCCCCEEEE
Confidence 358999987654 577777763 11000 01112223334555632111222 234458888999
Q ss_pred EeeCCCEEEEEEEc
Q 022849 191 YHRGPNYLEIDVDI 204 (291)
Q Consensus 191 y~~g~nYlEiDvDI 204 (291)
.....++|+|.||=
T Consensus 90 I~~~~~~f~V~vng 103 (134)
T d1a78a_ 90 FEYQTQKIIIKFSS 103 (134)
T ss_dssp EEECSSEEEEEETT
T ss_pred EEEcCCEEEEEECC
Confidence 99999999999873
No 7
>d1mg7a1 d.14.1.6 (A:14-187) Early switch protein XOL-1, N-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=8.91 E-value=55 Score=25.87 Aligned_cols=72 Identities=22% Similarity=0.262 Sum_probs=31.2
Q ss_pred Hhhc--CCccccccceeEEeeeccchhHHHHhhcCCCcccc-cceeeeeEeeCCCEEEE-EEEcCc-hHHHHHHHHHhh
Q 022849 145 RFVN--GDDAFRNQRFKIVNRIVKGPWIVKKAVGNYSACLL-GKALTCNYHRGPNYLEI-DVDIAS-STIASAILHLAL 218 (291)
Q Consensus 145 rFl~--gDd~fRn~RfKLIp~Vv~gpwiVr~aVG~~~~~ll-Gk~l~~~y~~g~nYlEi-DvDI~s-S~vA~~i~~l~~ 218 (291)
.|++ +|..|||+.+-.-|+||+--.--=.||.++ |+. |+.+.-+-.+-.+=-+| +++-+. ..+.+.+++=++
T Consensus 19 ~~~~~~~~~~~~~~~~~~APHvV~i~~~g~MAVNK~--C~v~s~il~~r~pks~~eH~Idev~~~~hg~it~~iI~DlL 95 (174)
T d1mg7a1 19 TYMETEDDPNFRNSKLAAAPHTVHMMDSGFLAINRQ--CLVKGKAILAREPKSSNEHMIDDLPKHAHDQHTLSILRDFI 95 (174)
T ss_dssp HTC----------CEEEEEEEEEEETTTEEEEEEEE--EEEEEEEEESSCCSSGGGSEECCCCCCTTHHHHHHHHHHHH
T ss_pred EeeeccCCCCcccchhccCCeEEeecccceeeeeee--EEEeeeeccccCCCchhhhhHHHhhHhhhcceeHHHHHHHH
Confidence 3454 577999999999999998211111234442 444 33222222222222445 444444 566666665444
No 8
>d2fsra1 d.108.1.1 (A:4-167) Probable acetyltranferase Atu2435 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=8.65 E-value=66 Score=22.56 Aligned_cols=22 Identities=27% Similarity=0.303 Sum_probs=17.4
Q ss_pred eeeeeecCCccccccceeceEEec
Q 022849 228 MGFLVESQAEDELPERLLGAVRVC 251 (291)
Q Consensus 228 ~gf~IEg~~eeELPE~lLG~vRl~ 251 (291)
+||.+||..+.+-|+.+ .-|++
T Consensus 142 ~GF~~eg~~~~~~~~~~--~yr~~ 163 (164)
T d2fsra1 142 IGGTLDPLAPRSDPEDL--VYRYH 163 (164)
T ss_dssp TTCEECTTSCCSSTTCE--EEEEC
T ss_pred CCCEEeeeEcccCCCce--EEeeC
Confidence 58999999999888876 45655
No 9
>d2p02a3 d.130.1.1 (A:274-417) S-adenosylmethionine synthetase {Human (Homo sapiens), isoform type-2 [TaxId: 9606]}
Probab=5.73 E-value=1.2e+02 Score=23.35 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=27.1
Q ss_pred EEcCchHHHHHHHH--HhhcccceEEEeeeeeeecCCc
Q 022849 202 VDIASSTIASAILH--LALGYVTSVTIDMGFLVESQAE 237 (291)
Q Consensus 202 vDI~sS~vA~~i~~--l~~g~~k~lvvD~gf~IEg~~e 237 (291)
||=+..|+||+|.. ...|..+.+.|-|++.|-=..+
T Consensus 39 vDRSaAY~AR~iAKniVaaglA~~c~VQlsYAIGva~P 76 (144)
T d2p02a3 39 VDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHP 76 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCSEEEEEEEECBTCCSC
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCeeEEEEEeecCcccc
Confidence 45555799999884 3468999999999999864333
No 10
>d2voua2 d.16.1.2 (A:164-291) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Probab=5.00 E-value=5.1e+02 Score=18.00 Aligned_cols=50 Identities=14% Similarity=0.333 Sum_probs=31.2
Q ss_pred EEEEEEecCCC-----CceEEEEEeeCCCCCchhhHHHhhcCCccccccceeEEeeeccc
Q 022849 113 FAVNLQVPGKD-----QHSAVFYFATEDPIPLGSLLYRFVNGDDAFRNQRFKIVNRIVKG 167 (291)
Q Consensus 113 fiVNlqlP~~~-----~~s~V~Yf~~~~~~~~~~Ll~rFl~gDd~fRn~RfKLIp~Vv~g 167 (291)
-+|-.-|||+. .+|+|.|...++ ...+...+.+-+.+| .+|++-|.-++.
T Consensus 39 h~v~YpI~g~~~~~~~~~N~V~~~~~~~----~~e~~~~~td~~g~~-~~~~~~~~~v~~ 93 (128)
T d2voua2 39 HLIAYPIPGRENAESPRLNFQWYWNVAE----GPDLDELMTDVRGIR-LPTSVHNNSLNP 93 (128)
T ss_dssp EEEEEEECCSSTTSCCEEEEEEEEECCT----THHHHHHTBCTTSCB-CSSEECGGGCCH
T ss_pred eEEEEEecCCCCCCcceEEEEEEEeCCC----cccchhhccChhhcc-cccCCCCCccCH
Confidence 46778888754 499999976432 222444444445556 777777666653
Done!