Your job contains 1 sequence.
>022850
MGDDKSTIVMASRERDRDRELLIPVADSGDESSKPSSSSSSSHHAGRETFSKVVRSWASK
KFMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFITSVTFIFLIGVFM
SSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPGMYSVFNLPYYISVGRQFIFCI
TFVITDQNTQAFKEVAIIRHPRIGEYAFGFITSSVVLQNYSGEEELCCVYVPTNHLYIGD
IFLINTKDVIRPNLSVREGIEIVVSGGMSMPQILSTLETRMPLDGSRPDRR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022850
(291 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061668 - symbol:COV1 "AT2G20120" species:3702... 629 1.6e-61 1
TAIR|locus:2061654 - symbol:LCV1 "AT2G20130" species:3702... 589 2.8e-57 1
TAIR|locus:2018640 - symbol:LCV2 "AT1G43130" species:3702... 442 1.1e-41 1
UNIPROTKB|Q3AEZ4 - symbol:CHY_0429 "Putative uncharacteri... 155 1.1e-24 2
TIGR_CMR|CHY_0429 - symbol:CHY_0429 "conserved hypothetic... 155 1.1e-24 2
UNIPROTKB|Q0C0Q5 - symbol:HNE_1988 "Putative uncharacteri... 128 8.1e-15 2
UNIPROTKB|Q5LRR3 - symbol:SPO2062 "Uncharacterized protei... 167 2.4e-12 1
TIGR_CMR|SPO_2062 - symbol:SPO_2062 "conserved hypothetic... 167 2.4e-12 1
UNIPROTKB|Q3Z7T7 - symbol:DET0989 "Putative uncharacteriz... 152 8.8e-10 1
TIGR_CMR|DET_0989 - symbol:DET_0989 "conserved hypothetic... 152 8.8e-10 1
UNIPROTKB|Q83BF1 - symbol:CBU_1559 "Hypothetical membrane... 146 6.7e-09 1
TIGR_CMR|CBU_1559 - symbol:CBU_1559 "conserved hypothetic... 146 6.7e-09 1
>TAIR|locus:2061668 [details] [associations]
symbol:COV1 "AT2G20120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009734 "auxin mediated signaling
pathway" evidence=IGI] [GO:0010222 "stem vascular tissue pattern
formation" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=IDA]
GO:GO:0016021 GO:GO:0005794 EMBL:CP002685 IPI:IPI00542783
RefSeq:NP_565464.2 UniGene:At.20924 PRIDE:F4IUE7
EnsemblPlants:AT2G20120.1 GeneID:816531 KEGG:ath:AT2G20120
OMA:GFLTANI GO:GO:0010222 InterPro:IPR007462 Pfam:PF04367
Uniprot:F4IUE7
Length = 268
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 130/212 (61%), Positives = 147/212 (69%)
Query: 1 MGDDKSTIVMASRERDRDRELLIPVADSGDEX-------XXXXXXXXXXHHAGRETFSKV 53
MGD+K IVMA+RERDR ELLIPVADSGD+ H + ET S
Sbjct: 1 MGDEKPVIVMANRERDR--ELLIPVADSGDKDDGSSSKPSSSSSASSSSHQSSHETLSLF 58
Query: 54 VRSWASKKFMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFITSVTFI 113
+R WASKKFMTGCVIL PIA+TFYITWWFIHFVDGFFSPIYAQLGI++FG GF+TS+ FI
Sbjct: 59 IRGWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFI 118
Query: 114 FLIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPGMYS-VFNLPYYIS- 171
FL+GVFMSSWLGASVL+LGEWFIKRMPFVRHIYNASKQIS AISP + F I
Sbjct: 119 FLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRH 178
Query: 172 --VGRQFIFCITFVITDQNTQAFKEVAIIRHP 201
VG IT + QN +E+ + P
Sbjct: 179 PRVGEYAFGFITSTVVLQNYPTEEELCCVYVP 210
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 96/172 (55%), Positives = 122/172 (70%)
Query: 112 FIFLIGVFMS---SWLGASVLSLGEWFIKRMPFVR--HIYNASKQISAAISPGMYSVFNL 166
FI + F S + LG +V G F+ + F+ ++ +S ++ ++ G + + +
Sbjct: 87 FIHFVDGFFSPIYAQLGINVFGFG--FLTSIAFIFLVGVFMSSWLGASVLNLGEWFIKRM 144
Query: 167 PYYISVGRQFIFCITFVITDQNTQAFKEVAIIRHPRIGEYAFGFITSSVVLQNYSGEEEL 226
P+ + T + DQNTQAFKEVAIIRHPR+GEYAFGFITS+VVLQNY EEEL
Sbjct: 145 PFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEEL 204
Query: 227 CCVYVPTNHLYIGDIFLINTKDVIRPNLSVREGIEIVVSGGMSMPQILSTLE 278
CCVYVPTNHLYIGD+ L+N+ DVIRPNLSVREGIEIVVSGGMSMPQILST++
Sbjct: 205 CCVYVPTNHLYIGDLLLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTVD 256
>TAIR|locus:2061654 [details] [associations]
symbol:LCV1 "AT2G20130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005794 "Golgi apparatus" evidence=IDA]
GO:GO:0005794 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006081
InterPro:IPR007462 Pfam:PF04367 EMBL:AY072447 EMBL:AY084942
EMBL:AY128911 IPI:IPI00548016 PIR:D84585 RefSeq:NP_565465.1
UniGene:At.48495 IntAct:Q8VY49 EnsemblPlants:AT2G20130.1
GeneID:816532 KEGG:ath:AT2G20130 TAIR:At2g20130 eggNOG:COG2928
HOGENOM:HOG000238507 InParanoid:Q8VY49 OMA:QTSKGAN PhylomeDB:Q8VY49
ProtClustDB:CLSN2688267 ArrayExpress:Q8VY49 Genevestigator:Q8VY49
Uniprot:Q8VY49
Length = 256
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 124/202 (61%), Positives = 138/202 (68%)
Query: 10 MASRERDRDRELLIPVADSGDEXX------XXXXXXXXXHHAGRETFSKVVRSWASKKFM 63
MA+RERDR ELLIPVAD GD+ H +G ET S +R WASKKFM
Sbjct: 1 MANRERDR--ELLIPVADFGDKDDGSSSKPSSSSSASSSHQSGHETLSLFIRGWASKKFM 58
Query: 64 TGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFITSVTFIFLIGVFMSSW 123
TGCVIL PIAVTFY TWWFIHFVDGFFSPIYA LGI+IFG GF+TS+ FIFL+GVFMSSW
Sbjct: 59 TGCVILLPIAVTFYTTWWFIHFVDGFFSPIYALLGINIFGFGFLTSIAFIFLVGVFMSSW 118
Query: 124 LGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPGMYS-VFNLPYYIS---VGRQFIFC 179
LGASVL+LGEWFIKRMPFVRHIYNASKQIS AISP + F I VG
Sbjct: 119 LGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGF 178
Query: 180 ITFVITDQNTQAFKEVAIIRHP 201
IT + QN +E+ + P
Sbjct: 179 ITSTVVLQNYPTEEELCCVYVP 200
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 99/178 (55%), Positives = 125/178 (70%)
Query: 106 FITSVTFIFLIGVFMS---SWLGASVLSLGEWFIKRMPFVR--HIYNASKQISAAISPGM 160
F T+ FI + F S + LG ++ G F+ + F+ ++ +S ++ ++ G
Sbjct: 71 FYTTWWFIHFVDGFFSPIYALLGINIFGFG--FLTSIAFIFLVGVFMSSWLGASVLNLGE 128
Query: 161 YSVFNLPYYISVGRQFIFCITFVITDQNTQAFKEVAIIRHPRIGEYAFGFITSSVVLQNY 220
+ + +P+ + T + DQNTQAFKEVAIIRHPR+GEYAFGFITS+VVLQNY
Sbjct: 129 WFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNY 188
Query: 221 SGEEELCCVYVPTNHLYIGDIFLINTKDVIRPNLSVREGIEIVVSGGMSMPQILSTLE 278
EEELCCVYVPTNHLYIGDI L+N+ DVIRPNLSVREGIEIVVSGGMSMPQILSTL+
Sbjct: 189 PTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQILSTLD 246
>TAIR|locus:2018640 [details] [associations]
symbol:LCV2 "AT1G43130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0010222
"stem vascular tissue pattern formation" evidence=ISS] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
EMBL:CP002684 GO:GO:0005794 GO:GO:0005768 GO:GO:0005802
EMBL:AC026757 GO:GO:0010222 InterPro:IPR007462 Pfam:PF04367
ProtClustDB:CLSN2688267 EMBL:BT033158 EMBL:AK176692 EMBL:AK176760
IPI:IPI00521827 RefSeq:NP_564483.1 UniGene:At.39020 PRIDE:Q9C8C1
EnsemblPlants:AT1G43130.1 GeneID:840912 KEGG:ath:AT1G43130
TAIR:At1g43130 InParanoid:Q9C8C1 OMA:FVKHIYS PhylomeDB:Q9C8C1
ArrayExpress:Q9C8C1 Genevestigator:Q9C8C1 Uniprot:Q9C8C1
Length = 261
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 80/106 (75%), Positives = 92/106 (86%)
Query: 53 VVRSWASKKFMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFITSVTF 112
V++SW SKKFMTG V+LFP+AVTF ITWWFI FVDGFFSPIY LG+DIFGLGFITSV F
Sbjct: 44 VLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYENLGVDIFGLGFITSVLF 103
Query: 113 IFLIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISP 158
F +G+F SSWLG++V LGE FI+RMPFV+HIY+ASKQIS AISP
Sbjct: 104 TFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQISTAISP 149
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 89/178 (50%), Positives = 118/178 (66%)
Query: 106 FITSVTFI-FLIGVFMSSW--LGASVLSLGEWFIKRMPFVRHI-YNASKQISAAIS-PGM 160
F+ + FI F+ G F + LG + LG FI + F + AS + + + G
Sbjct: 67 FLITWWFIQFVDGFFSPIYENLGVDIFGLG--FITSVLFTFFVGIFASSWLGSTVFWLGE 124
Query: 161 YSVFNLPYYISVGRQFIFCITFVITDQNTQAFKEVAIIRHPRIGEYAFGFITSSVVLQNY 220
+ +P+ + T + DQNT AFKEVAIIRHPRIGEYAFGFITSSV LQ
Sbjct: 125 QFIRRMPFVKHIYSASKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTD 184
Query: 221 SGEEELCCVYVPTNHLYIGDIFLINTKDVIRPNLSVREGIEIVVSGGMSMPQILSTLE 278
GEEELC VYVPTNHLYIGD+FL++++++IRPNLS+REGIEI+VS GM+MPQ++S ++
Sbjct: 185 HGEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVISHVD 242
>UNIPROTKB|Q3AEZ4 [details] [associations]
symbol:CHY_0429 "Putative uncharacterized protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP000141 GenomeReviews:CP000141_GR OMA:GFLTANI
InterPro:IPR007462 Pfam:PF04367 eggNOG:COG2928 HOGENOM:HOG000264416
RefSeq:YP_359290.1 STRING:Q3AEZ4 GeneID:3727678 KEGG:chy:CHY_0429
PATRIC:21274019 BioCyc:CHYD246194:GJCN-430-MONOMER Uniprot:Q3AEZ4
Length = 211
Score = 155 (59.6 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 36/112 (32%), Positives = 60/112 (53%)
Query: 45 AGRETFSKVVRSWASKKFMTGCVILFPIAVTFYITWWFIHFVD----GFFSPIYAQLGID 100
AGRE + + + F+TG ++ P A+T YI + F D GFF+ I+ GID
Sbjct: 2 AGREEGRDIFKKLGNY-FLTGLAVITPAAITIYILFALFSFFDRPLRGFFAQIF---GID 57
Query: 101 IFGLGFITSVTFIFLIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQI 152
I GLG +T + ++G+ ++++G +L E ++P R +Y SKQ+
Sbjct: 58 IPGLGVLTVALLVPIVGMLATNFIGRKILKKFEQLFIKIPVTRSLYKTSKQL 109
Score = 147 (56.8 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 36/94 (38%), Positives = 57/94 (60%)
Query: 181 TFVITDQNTQAFKEVAIIRHPRIGEYAFGFITSSVVLQ-NYSGEEELCCVYVPTN-HLYI 238
TF+ +++ AFK V + R+P+ G YA GFIT S + N E+L V++PT +
Sbjct: 112 TFLHPERD--AFKSVVLARYPKDGSYALGFITGSGFDEINEKTREKLLPVFLPTTPNPTS 169
Query: 239 GDIFLINTKDVIRPNLSVREGIEIVVSGGMSMPQ 272
G + + KD+I NLSV + ++I+VSGG+ P+
Sbjct: 170 GWLLYLPEKDIIPLNLSVEDALKIIVSGGIVQPE 203
>TIGR_CMR|CHY_0429 [details] [associations]
symbol:CHY_0429 "conserved hypothetical protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP000141 GenomeReviews:CP000141_GR OMA:GFLTANI
InterPro:IPR007462 Pfam:PF04367 eggNOG:COG2928 HOGENOM:HOG000264416
RefSeq:YP_359290.1 STRING:Q3AEZ4 GeneID:3727678 KEGG:chy:CHY_0429
PATRIC:21274019 BioCyc:CHYD246194:GJCN-430-MONOMER Uniprot:Q3AEZ4
Length = 211
Score = 155 (59.6 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 36/112 (32%), Positives = 60/112 (53%)
Query: 45 AGRETFSKVVRSWASKKFMTGCVILFPIAVTFYITWWFIHFVD----GFFSPIYAQLGID 100
AGRE + + + F+TG ++ P A+T YI + F D GFF+ I+ GID
Sbjct: 2 AGREEGRDIFKKLGNY-FLTGLAVITPAAITIYILFALFSFFDRPLRGFFAQIF---GID 57
Query: 101 IFGLGFITSVTFIFLIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQI 152
I GLG +T + ++G+ ++++G +L E ++P R +Y SKQ+
Sbjct: 58 IPGLGVLTVALLVPIVGMLATNFIGRKILKKFEQLFIKIPVTRSLYKTSKQL 109
Score = 147 (56.8 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 36/94 (38%), Positives = 57/94 (60%)
Query: 181 TFVITDQNTQAFKEVAIIRHPRIGEYAFGFITSSVVLQ-NYSGEEELCCVYVPTN-HLYI 238
TF+ +++ AFK V + R+P+ G YA GFIT S + N E+L V++PT +
Sbjct: 112 TFLHPERD--AFKSVVLARYPKDGSYALGFITGSGFDEINEKTREKLLPVFLPTTPNPTS 169
Query: 239 GDIFLINTKDVIRPNLSVREGIEIVVSGGMSMPQ 272
G + + KD+I NLSV + ++I+VSGG+ P+
Sbjct: 170 GWLLYLPEKDIIPLNLSVEDALKIIVSGGIVQPE 203
>UNIPROTKB|Q0C0Q5 [details] [associations]
symbol:HNE_1988 "Putative uncharacterized protein"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000158 GenomeReviews:CP000158_GR InterPro:IPR007462
Pfam:PF04367 eggNOG:COG2928 RefSeq:YP_760688.1 STRING:Q0C0Q5
GeneID:4290430 KEGG:hne:HNE_1988 PATRIC:32216819
HOGENOM:HOG000264416 OMA:KYIISMG
BioCyc:HNEP228405:GI69-2013-MONOMER Uniprot:Q0C0Q5
Length = 237
Score = 128 (50.1 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 30/104 (28%), Positives = 51/104 (49%)
Query: 56 SWASKKFMTGCVILFPIAVTFYITWWFIHFVDGFFSPIY-------AQLGIDIFGLGFIT 108
+W +F+ G +I PI TF I + I+ +D P+ L + G G I
Sbjct: 24 AWLRARFVAGMLIALPIVATFVILEFLINLIDSRVVPLLPPSLRPETYLDYAVPGFGLII 83
Query: 109 SVTFIFLIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQI 152
+ F+ L+G +++LG + L + + R+P VR +Y+ KQI
Sbjct: 84 LILFLTLVGAVATNFLGKFFVDLTDRVLTRVPVVRSVYSVFKQI 127
Score = 117 (46.2 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 28/90 (31%), Positives = 51/90 (56%)
Query: 187 QNTQA--FKEVAIIRHPRIGEYAFGFITSSVV--LQNYSGEEELCCVYVPTN-HLYIGDI 241
QN A +KEVA++ +PR G + GF+ + ++ GE + ++VPT + G +
Sbjct: 132 QNNTAGQYKEVAMVEYPREGSWVIGFVAGPIKGEMRQRLGENFIG-IFVPTTPNPTSGFL 190
Query: 242 FLINTKDVIRPNLSVREGIEIVVSGGMSMP 271
+ ++R ++SV EG +I+ SGG+ +P
Sbjct: 191 LYVAEAKIVRLDMSVEEGAKIIFSGGLVVP 220
>UNIPROTKB|Q5LRR3 [details] [associations]
symbol:SPO2062 "Uncharacterized protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR007462 Pfam:PF04367
HOGENOM:HOG000264416 OMA:KYIISMG RefSeq:YP_167292.1 DNASU:3193433
GeneID:3193433 KEGG:sil:SPO2062 PATRIC:23377465
ProtClustDB:CLSK933739 Uniprot:Q5LRR3
Length = 224
Score = 167 (63.8 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 39/131 (29%), Positives = 65/131 (49%)
Query: 62 FMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQ-------LGIDIFGLGFITSVTFIF 114
F+TG V++ P+ +T ++ W + +VD F P+ +GI++ G+G I + F
Sbjct: 24 FLTGIVVIAPVGLTIWLFWSVVGWVDSFVLPLVPHQFRPEQYIGINLRGVGVIFLLVFTI 83
Query: 115 LIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPGMYSVFNLPYYISVGR 174
++G +G S++ E + RMP VR +Y+ KQIS + F I R
Sbjct: 84 VVGWIAKGIIGRSLIQYAEGVVDRMPVVRSVYSGIKQISETVFAQTERSFEQACLIQYPR 143
Query: 175 QFIFCITFVIT 185
+ I+ I FV T
Sbjct: 144 RGIWAIGFVST 154
>TIGR_CMR|SPO_2062 [details] [associations]
symbol:SPO_2062 "conserved hypothetical protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000031 GenomeReviews:CP000031_GR InterPro:IPR007462
Pfam:PF04367 HOGENOM:HOG000264416 OMA:KYIISMG RefSeq:YP_167292.1
DNASU:3193433 GeneID:3193433 KEGG:sil:SPO2062 PATRIC:23377465
ProtClustDB:CLSK933739 Uniprot:Q5LRR3
Length = 224
Score = 167 (63.8 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 39/131 (29%), Positives = 65/131 (49%)
Query: 62 FMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQ-------LGIDIFGLGFITSVTFIF 114
F+TG V++ P+ +T ++ W + +VD F P+ +GI++ G+G I + F
Sbjct: 24 FLTGIVVIAPVGLTIWLFWSVVGWVDSFVLPLVPHQFRPEQYIGINLRGVGVIFLLVFTI 83
Query: 115 LIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPGMYSVFNLPYYISVGR 174
++G +G S++ E + RMP VR +Y+ KQIS + F I R
Sbjct: 84 VVGWIAKGIIGRSLIQYAEGVVDRMPVVRSVYSGIKQISETVFAQTERSFEQACLIQYPR 143
Query: 175 QFIFCITFVIT 185
+ I+ I FV T
Sbjct: 144 RGIWAIGFVST 154
>UNIPROTKB|Q3Z7T7 [details] [associations]
symbol:DET0989 "Putative uncharacterized protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000027 GenomeReviews:CP000027_GR OMA:GFLTANI
InterPro:IPR007462 Pfam:PF04367 eggNOG:COG2928 HOGENOM:HOG000264416
RefSeq:YP_181712.1 STRING:Q3Z7T7 GeneID:3229747 KEGG:det:DET0989
PATRIC:21609027 ProtClustDB:CLSK837182
BioCyc:DETH243164:GJNF-990-MONOMER Uniprot:Q3Z7T7
Length = 214
Score = 152 (58.6 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 31/152 (20%), Positives = 68/152 (44%)
Query: 61 KFMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQLGIDIF-GLGFITSVTFIFLIGVF 119
+F+TG + PI + W + +DG P+ F GLG + ++ I+L+G+
Sbjct: 15 RFLTGLAFVLPIGAALGLLIWVFNIIDGLLKPVIEFFFNWYFPGLGLLVTLVLIYLVGLI 74
Query: 120 MSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPGMYSVFNLPYYISVGRQFIFC 179
+S++ G +L + + ++P +YN++KQ+ + F + R +
Sbjct: 75 LSNYFGKQILGWVDKILVKVPIFNQVYNSAKQVIETLGVSNKVSFKEAVMVEFPRTGMHS 134
Query: 180 ITFVITDQNTQAFKEVAIIRHPRIGEYAFGFI 211
+ F+ + A +++ ++ P GF+
Sbjct: 135 LAFITNETTNSAGEKLYLVYVPGSPNPTSGFL 166
Score = 109 (43.4 bits), Expect = 0.00054, P = 0.00054
Identities = 27/92 (29%), Positives = 50/92 (54%)
Query: 188 NTQAFKEVAIIRHPRIGEYAFGFITSSVVLQNYSGEEELCCVYVPTN-HLYIGDIFLINT 246
N +FKE ++ PR G ++ FIT+ N +GE+ L VYVP + + G + L+
Sbjct: 115 NKVSFKEAVMVEFPRTGMHSLAFITNETT--NSAGEK-LYLVYVPGSPNPTSGFLELLRE 171
Query: 247 KDVIRPNLSVREGIEIVVSGGMSMPQILSTLE 278
+ R N+SV + ++ ++S G+ P + ++
Sbjct: 172 NQIERVNVSVEDAMKTLISCGLVFPDNVQAID 203
>TIGR_CMR|DET_0989 [details] [associations]
symbol:DET_0989 "conserved hypothetical protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000027 GenomeReviews:CP000027_GR OMA:GFLTANI
InterPro:IPR007462 Pfam:PF04367 eggNOG:COG2928 HOGENOM:HOG000264416
RefSeq:YP_181712.1 STRING:Q3Z7T7 GeneID:3229747 KEGG:det:DET0989
PATRIC:21609027 ProtClustDB:CLSK837182
BioCyc:DETH243164:GJNF-990-MONOMER Uniprot:Q3Z7T7
Length = 214
Score = 152 (58.6 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 31/152 (20%), Positives = 68/152 (44%)
Query: 61 KFMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQLGIDIF-GLGFITSVTFIFLIGVF 119
+F+TG + PI + W + +DG P+ F GLG + ++ I+L+G+
Sbjct: 15 RFLTGLAFVLPIGAALGLLIWVFNIIDGLLKPVIEFFFNWYFPGLGLLVTLVLIYLVGLI 74
Query: 120 MSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPGMYSVFNLPYYISVGRQFIFC 179
+S++ G +L + + ++P +YN++KQ+ + F + R +
Sbjct: 75 LSNYFGKQILGWVDKILVKVPIFNQVYNSAKQVIETLGVSNKVSFKEAVMVEFPRTGMHS 134
Query: 180 ITFVITDQNTQAFKEVAIIRHPRIGEYAFGFI 211
+ F+ + A +++ ++ P GF+
Sbjct: 135 LAFITNETTNSAGEKLYLVYVPGSPNPTSGFL 166
Score = 109 (43.4 bits), Expect = 0.00054, P = 0.00054
Identities = 27/92 (29%), Positives = 50/92 (54%)
Query: 188 NTQAFKEVAIIRHPRIGEYAFGFITSSVVLQNYSGEEELCCVYVPTN-HLYIGDIFLINT 246
N +FKE ++ PR G ++ FIT+ N +GE+ L VYVP + + G + L+
Sbjct: 115 NKVSFKEAVMVEFPRTGMHSLAFITNETT--NSAGEK-LYLVYVPGSPNPTSGFLELLRE 171
Query: 247 KDVIRPNLSVREGIEIVVSGGMSMPQILSTLE 278
+ R N+SV + ++ ++S G+ P + ++
Sbjct: 172 NQIERVNVSVEDAMKTLISCGLVFPDNVQAID 203
>UNIPROTKB|Q83BF1 [details] [associations]
symbol:CBU_1559 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR007462
Pfam:PF04367 HOGENOM:HOG000264416 OMA:KYIISMG RefSeq:NP_820542.1
GeneID:1209469 KEGG:cbu:CBU_1559 PATRIC:17931881
ProtClustDB:CLSK914863 BioCyc:CBUR227377:GJ7S-1539-MONOMER
Uniprot:Q83BF1
Length = 209
Score = 146 (56.5 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 44/151 (29%), Positives = 75/151 (49%)
Query: 55 RSWASKKFMTGCVILFPIAVTFYITWWFIHFVDGFFS--PIY---AQL-GIDIFGLGFIT 108
R + + + G ++ PI VTF + + + +DG P + QL G I GLG +
Sbjct: 8 RYFIRRYLIAGLLVWLPIWVTFIVIRFLVDLLDGTLKLLPYHYRPEQLFGHKIPGLGLVF 67
Query: 109 SVTFIFLIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPGMYSVFNLPY 168
++ IFL G+ +++++G ++ E + R+P VR IY A KQ++ A F
Sbjct: 68 TIIIIFLTGLLVTNFVGRYLIGWWERILARIPLVRSIYTAVKQVTHAFVQPQGQSFRKVV 127
Query: 169 YISVGRQFIFCITFVITDQNTQA--FKEVAI 197
I R+ ++ I FV T N Q F++ A+
Sbjct: 128 LIEYPRKGLWSIAFV-TSNNFQGLPFEDDAL 157
Score = 110 (43.8 bits), Expect = 0.00037, P = 0.00037
Identities = 26/93 (27%), Positives = 49/93 (52%)
Query: 180 ITFVITDQNTQAFKEVAIIRHPRIGEYAFGFITSSVVLQNYSGEEELCCVYVPTN-HLYI 238
+T Q+F++V +I +PR G ++ F+TS+ Q E++ V+VPT +
Sbjct: 111 VTHAFVQPQGQSFRKVVLIEYPRKGLWSIAFVTSNN-FQGLPFEDDALAVFVPTTPNPTS 169
Query: 239 GDIFLINTKDVIRPNLSVREGIEIVVSGGMSMP 271
G + + KDVI +++ E +++S G+ P
Sbjct: 170 GFLMVTPKKDVIDLPVTIEEAFRMIISLGVVTP 202
>TIGR_CMR|CBU_1559 [details] [associations]
symbol:CBU_1559 "conserved hypothetical protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR007462
Pfam:PF04367 HOGENOM:HOG000264416 OMA:KYIISMG RefSeq:NP_820542.1
GeneID:1209469 KEGG:cbu:CBU_1559 PATRIC:17931881
ProtClustDB:CLSK914863 BioCyc:CBUR227377:GJ7S-1539-MONOMER
Uniprot:Q83BF1
Length = 209
Score = 146 (56.5 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 44/151 (29%), Positives = 75/151 (49%)
Query: 55 RSWASKKFMTGCVILFPIAVTFYITWWFIHFVDGFFS--PIY---AQL-GIDIFGLGFIT 108
R + + + G ++ PI VTF + + + +DG P + QL G I GLG +
Sbjct: 8 RYFIRRYLIAGLLVWLPIWVTFIVIRFLVDLLDGTLKLLPYHYRPEQLFGHKIPGLGLVF 67
Query: 109 SVTFIFLIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPGMYSVFNLPY 168
++ IFL G+ +++++G ++ E + R+P VR IY A KQ++ A F
Sbjct: 68 TIIIIFLTGLLVTNFVGRYLIGWWERILARIPLVRSIYTAVKQVTHAFVQPQGQSFRKVV 127
Query: 169 YISVGRQFIFCITFVITDQNTQA--FKEVAI 197
I R+ ++ I FV T N Q F++ A+
Sbjct: 128 LIEYPRKGLWSIAFV-TSNNFQGLPFEDDAL 157
Score = 110 (43.8 bits), Expect = 0.00037, P = 0.00037
Identities = 26/93 (27%), Positives = 49/93 (52%)
Query: 180 ITFVITDQNTQAFKEVAIIRHPRIGEYAFGFITSSVVLQNYSGEEELCCVYVPTN-HLYI 238
+T Q+F++V +I +PR G ++ F+TS+ Q E++ V+VPT +
Sbjct: 111 VTHAFVQPQGQSFRKVVLIEYPRKGLWSIAFVTSNN-FQGLPFEDDALAVFVPTTPNPTS 169
Query: 239 GDIFLINTKDVIRPNLSVREGIEIVVSGGMSMP 271
G + + KDVI +++ E +++S G+ P
Sbjct: 170 GFLMVTPKKDVIDLPVTIEEAFRMIISLGVVTP 202
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.328 0.142 0.441 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 291 280 0.00082 115 3 11 22 0.40 33
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 617 (66 KB)
Total size of DFA: 204 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.81u 0.12s 20.93t Elapsed: 00:00:01
Total cpu time: 20.81u 0.12s 20.93t Elapsed: 00:00:01
Start: Mon May 20 18:16:41 2013 End: Mon May 20 18:16:42 2013