Query 022850
Match_columns 291
No_of_seqs 138 out of 620
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 12:11:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022850.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022850hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fita_ d.13.1.1 (A:) FHIT (fr 69.7 2 0.00015 33.1 4.1 42 223-264 17-59 (146)
2 d1y23a_ d.13.1.1 (A:) Hit {Bac 67.9 2 0.00014 32.5 3.5 39 223-261 20-59 (139)
3 d2oika1 d.13.1.1 (A:6-144) His 61.7 3.9 0.00029 30.9 4.2 41 223-263 19-60 (139)
4 d1pw4a_ f.38.1.1 (A:) Glycerol 60.6 34 0.0025 27.8 10.5 21 35-55 3-23 (447)
5 d1emsa1 d.13.1.1 (A:281-440) N 55.3 5.3 0.00038 31.4 4.1 40 223-262 34-74 (160)
6 d1guqa2 d.13.1.2 (A:178-348) G 50.0 6.8 0.00049 30.3 3.9 39 223-261 38-77 (171)
7 d1xqua_ d.13.1.1 (A:) Putative 41.8 5.2 0.00038 29.1 1.8 33 223-255 21-54 (113)
8 d1z84a2 d.13.1.2 (A:196-351) G 39.0 14 0.00099 28.3 4.0 40 223-262 35-75 (156)
9 d1kpfa_ d.13.1.1 (A:) Protein 33.2 14 0.0011 26.6 3.1 36 223-258 19-55 (111)
10 d1q90g_ f.23.26.1 (G:) PetG su 19.5 57 0.0042 18.9 3.3 21 104-124 7-27 (30)
No 1
>d1fita_ d.13.1.1 (A:) FHIT (fragile histidine triad protein) {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.73 E-value=2 Score=33.14 Aligned_cols=42 Identities=19% Similarity=0.239 Sum_probs=35.5
Q ss_pred CcceEEEEecCCCCCceeEEEEeCCCeecC-CCCHHHHHHHHh
Q 022850 223 EEELCCVYVPTNHLYIGDIFLINTKDVIRP-NLSVREGIEIVV 264 (291)
Q Consensus 223 ~e~~v~VfVPtsp~~sG~l~lV~~~dV~~l-DmSveeAmk~vi 264 (291)
+++.+.+|++..|..-|-++++|++-+..+ |++-+|...+.-
T Consensus 17 e~e~~~afld~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~ 59 (146)
T d1fita_ 17 KTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ 59 (146)
T ss_dssp ECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHH
T ss_pred ECCCEEEEECCCCCCCcEEEEEecceehHHHHhhHHHHHHHHH
Confidence 577899999999988999999999999885 999887764443
No 2
>d1y23a_ d.13.1.1 (A:) Hit {Bacillus subtilis [TaxId: 1423]}
Probab=67.93 E-value=2 Score=32.47 Aligned_cols=39 Identities=10% Similarity=0.208 Sum_probs=33.4
Q ss_pred CcceEEEEecCCCCCceeEEEEeCCCeecC-CCCHHHHHH
Q 022850 223 EEELCCVYVPTNHLYIGDIFLINTKDVIRP-NLSVREGIE 261 (291)
Q Consensus 223 ~e~~v~VfVPtsp~~sG~l~lV~~~dV~~l-DmSveeAmk 261 (291)
+++++.||++..|..-|.++++|++.+..+ |++.++...
T Consensus 20 ede~~~af~d~~P~~~GH~LViPk~H~~~~~dL~~~~~~~ 59 (139)
T d1y23a_ 20 EDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQ 59 (139)
T ss_dssp ECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHT
T ss_pred ECCCEEEEecCCCCCCcEEEEEEecccccccccchHHHHH
Confidence 467889999999988999999999999985 899877643
No 3
>d2oika1 d.13.1.1 (A:6-144) Histidine triad protein Mfla2506 {Methylobacillus flagellatus [TaxId: 405]}
Probab=61.69 E-value=3.9 Score=30.91 Aligned_cols=41 Identities=24% Similarity=0.270 Sum_probs=34.3
Q ss_pred CcceEEEEecCCCCCceeEEEEeCCCeecC-CCCHHHHHHHH
Q 022850 223 EEELCCVYVPTNHLYIGDIFLINTKDVIRP-NLSVREGIEIV 263 (291)
Q Consensus 223 ~e~~v~VfVPtsp~~sG~l~lV~~~dV~~l-DmSveeAmk~v 263 (291)
+++.+.||+.-.|.+-|.++++|++.+..+ |++-+|...+.
T Consensus 19 e~~~~~v~l~~~p~~pGh~Lvipk~H~~~l~dL~~~e~~~l~ 60 (139)
T d2oika1 19 QDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLM 60 (139)
T ss_dssp ECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHH
T ss_pred ECCCEEEEEcCCCCCCcEEEEecccccchhhhccHHHHHHHH
Confidence 356788999888877899999999999885 99999877664
No 4
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=60.60 E-value=34 Score=27.80 Aligned_cols=21 Identities=14% Similarity=0.177 Sum_probs=10.6
Q ss_pred CCCCCCCCCCCchHHHHHHHH
Q 022850 35 PSSSSSSSHHAGRETFSKVVR 55 (291)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~lr 55 (291)
|+|..+..+.+..+.-.++.|
T Consensus 3 pap~~~~~p~~~~~~~~~~~~ 23 (447)
T d1pw4a_ 3 PAPHKARLPAAEIDPTYRRLR 23 (447)
T ss_dssp CCCCCCCCCCSCCHHHHHHHH
T ss_pred CCCCCCCCChhhhccchhhHH
Confidence 444444445445555555554
No 5
>d1emsa1 d.13.1.1 (A:281-440) NIT-FHIT fusion protein, C-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=55.29 E-value=5.3 Score=31.37 Aligned_cols=40 Identities=18% Similarity=0.237 Sum_probs=34.3
Q ss_pred CcceEEEEecCCCCCceeEEEEeCCCeecC-CCCHHHHHHH
Q 022850 223 EEELCCVYVPTNHLYIGDIFLINTKDVIRP-NLSVREGIEI 262 (291)
Q Consensus 223 ~e~~v~VfVPtsp~~sG~l~lV~~~dV~~l-DmSveeAmk~ 262 (291)
+++++.+|+.-.|..-|-++++|++.+..+ |++-||...+
T Consensus 34 ede~~~af~Di~P~~pgH~LVIPK~H~~~l~dL~~ee~~~l 74 (160)
T d1emsa1 34 STPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADL 74 (160)
T ss_dssp ECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHH
T ss_pred eCCCEEEEECCCCCCCCeEEEEEecccchhhhhhhHHHHHH
Confidence 578899999999988899999999999875 9998876543
No 6
>d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]}
Probab=49.97 E-value=6.8 Score=30.28 Aligned_cols=39 Identities=21% Similarity=0.221 Sum_probs=32.7
Q ss_pred CcceEEEEecCCCCCceeEEEEeCCCeecC-CCCHHHHHH
Q 022850 223 EEELCCVYVPTNHLYIGDIFLINTKDVIRP-NLSVREGIE 261 (291)
Q Consensus 223 ~e~~v~VfVPtsp~~sG~l~lV~~~dV~~l-DmSveeAmk 261 (291)
+++.+.+|+|-+|.+-|-+.++|++.+-.+ |++-+|.-.
T Consensus 38 e~e~~~af~~~~p~~p~h~lIiPk~h~~~~~~l~~~e~~~ 77 (171)
T d1guqa2 38 ETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSD 77 (171)
T ss_dssp ECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHHHHHH
T ss_pred ECCeEEEEEcCCCCCcceEEEecchhcCChhhCCHHHHHH
Confidence 467889999999988899999999999874 888766543
No 7
>d1xqua_ d.13.1.1 (A:) Putative hydrolase {Clostridium thermocellum [TaxId: 1515]}
Probab=41.77 E-value=5.2 Score=29.14 Aligned_cols=33 Identities=12% Similarity=0.153 Sum_probs=27.2
Q ss_pred CcceEEEEecCCCCCceeEEEEeCCCeecC-CCC
Q 022850 223 EEELCCVYVPTNHLYIGDIFLINTKDVIRP-NLS 255 (291)
Q Consensus 223 ~e~~v~VfVPtsp~~sG~l~lV~~~dV~~l-DmS 255 (291)
+++.+.+|++..|.+-|-++++|++.+..+ |++
T Consensus 21 ede~~~af~d~~P~~~gH~LViPk~H~~~~~~l~ 54 (113)
T d1xqua_ 21 EDERVIAIKDINPAAPVHVLIIPKEHIANVKEIN 54 (113)
T ss_dssp ECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCC
T ss_pred eCCCEEEEECCCCCCCceEEEeecccccchhhcc
Confidence 467889999999988999999999887764 454
No 8
>d1z84a2 d.13.1.2 (A:196-351) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=39.00 E-value=14 Score=28.26 Aligned_cols=40 Identities=15% Similarity=0.207 Sum_probs=32.9
Q ss_pred CcceEEEEecCCCCCceeEEEEeCCCeecC-CCCHHHHHHH
Q 022850 223 EEELCCVYVPTNHLYIGDIFLINTKDVIRP-NLSVREGIEI 262 (291)
Q Consensus 223 ~e~~v~VfVPtsp~~sG~l~lV~~~dV~~l-DmSveeAmk~ 262 (291)
+++.+.+|+|-+|..-|-+.++|++.+..+ |++-+|.-.+
T Consensus 35 e~~~~~a~~p~~p~~p~h~lIiPk~h~~~~~~l~~~e~~~l 75 (156)
T d1z84a2 35 ESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDL 75 (156)
T ss_dssp ECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHH
T ss_pred ECCCEEEEEccCCCcCcEEEEEecchhhhhccCCHHHHHHH
Confidence 356789999999988899999999999975 8988765433
No 9
>d1kpfa_ d.13.1.1 (A:) Protein kinase C inhibitor-1, PKCI-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.22 E-value=14 Score=26.61 Aligned_cols=36 Identities=11% Similarity=0.182 Sum_probs=29.1
Q ss_pred CcceEEEEecCCCCCceeEEEEeCCCeecC-CCCHHH
Q 022850 223 EEELCCVYVPTNHLYIGDIFLINTKDVIRP-NLSVRE 258 (291)
Q Consensus 223 ~e~~v~VfVPtsp~~sG~l~lV~~~dV~~l-DmSvee 258 (291)
++|.+.+|....|..-|-++++|++-+..+ |++.|+
T Consensus 19 ede~~~af~D~~P~~~gH~LViPk~H~~~~~~l~~~~ 55 (111)
T d1kpfa_ 19 EDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDD 55 (111)
T ss_dssp ECSSEEEEECSSCSSSEEEEEEESSCCSCGGGCCGGG
T ss_pred eCCCEEEEecCCCCCCceEEEeecchhcchhhhhhHH
Confidence 356788899988988999999999988775 666554
No 10
>d1q90g_ f.23.26.1 (G:) PetG subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=19.46 E-value=57 Score=18.95 Aligned_cols=21 Identities=19% Similarity=0.586 Sum_probs=16.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhh
Q 022850 104 LGFITSVTFIFLIGVFMSSWL 124 (291)
Q Consensus 104 lG~l~~i~lIfliG~l~~~~l 124 (291)
.|+++.++=+.+.|+++..|+
T Consensus 7 ~GivlGlipiTl~Glfv~Ayl 27 (30)
T d1q90g_ 7 CGIVLGLVPVTIAGLFVTAYL 27 (30)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHhhHHHHHHHHHHHHHH
Confidence 467777777888999888764
Done!