Query 022852
Match_columns 291
No_of_seqs 224 out of 1685
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 12:13:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022852.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022852hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n5f_A L-carbamoylase, N-carba 100.0 8.1E-45 2.8E-49 342.6 29.2 262 1-286 30-291 (408)
2 2v8h_A Beta-alanine synthase; 100.0 5.6E-41 1.9E-45 322.5 24.9 257 1-286 65-326 (474)
3 1z2l_A Allantoate amidohydrola 100.0 8.8E-41 3E-45 316.2 23.5 259 1-286 34-295 (423)
4 3ram_A HMRA protein; two-domai 100.0 1.3E-34 4.5E-39 272.0 14.8 211 1-286 31-248 (394)
5 3io1_A Aminobenzoyl-glutamate 100.0 1.3E-33 4.6E-38 269.1 21.5 212 1-286 29-307 (445)
6 1ysj_A Protein YXEP; M20 famil 100.0 7E-33 2.4E-37 260.9 21.7 218 1-286 47-283 (404)
7 3gb0_A Peptidase T; NP_980509. 100.0 4.1E-33 1.4E-37 259.3 16.7 208 1-285 21-255 (373)
8 1vgy_A Succinyl-diaminopimelat 100.0 3.3E-32 1.1E-36 255.2 21.3 221 1-286 21-266 (393)
9 3ct9_A Acetylornithine deacety 100.0 2.2E-32 7.5E-37 253.4 19.8 211 1-287 26-256 (356)
10 1xmb_A IAA-amino acid hydrolas 100.0 2.1E-32 7.1E-37 258.8 19.8 217 1-284 43-275 (418)
11 3pfo_A Putative acetylornithin 100.0 1.2E-32 4.1E-37 261.0 18.2 222 1-287 41-306 (433)
12 2rb7_A Peptidase, M20/M25/M40 100.0 2.3E-32 7.9E-37 254.0 18.5 208 3-286 26-257 (364)
13 3rza_A Tripeptidase; phosphory 100.0 2E-32 6.9E-37 257.0 15.9 208 1-286 39-276 (396)
14 3tx8_A Succinyl-diaminopimelat 100.0 1.4E-32 4.7E-37 255.4 13.3 218 1-287 28-262 (369)
15 3isz_A Succinyl-diaminopimelat 100.0 1.2E-31 4E-36 249.1 19.2 221 1-286 18-263 (377)
16 1cg2_A Carboxypeptidase G2; me 100.0 2.2E-31 7.4E-36 249.6 21.1 206 5-285 41-270 (393)
17 3ife_A Peptidase T; metallopep 100.0 4.3E-32 1.5E-36 257.8 13.7 206 2-286 53-312 (434)
18 2pok_A Peptidase, M20/M25/M40 100.0 1.5E-28 5E-33 236.2 18.6 232 5-287 66-364 (481)
19 2f7v_A Aectylcitrulline deacet 100.0 3.7E-29 1.3E-33 232.6 13.9 201 4-287 32-257 (369)
20 1fno_A Peptidase T; metallo pe 100.0 1.9E-28 6.4E-33 231.3 17.5 203 3-285 29-284 (417)
21 2zog_A Cytosolic non-specific 100.0 1.8E-28 6.1E-33 235.3 16.6 232 4-287 44-353 (479)
22 3dlj_A Beta-Ala-His dipeptidas 100.0 4.2E-27 1.4E-31 226.4 20.4 232 4-286 51-359 (485)
23 3mru_A Aminoacyl-histidine dip 99.9 2.5E-27 8.5E-32 228.4 18.0 204 1-283 29-275 (490)
24 2qyv_A XAA-His dipeptidase; YP 99.9 1.2E-26 4.2E-31 223.2 22.6 202 2-280 27-271 (487)
25 3pfe_A Succinyl-diaminopimelat 99.9 1.8E-26 6.3E-31 221.3 17.9 231 4-286 46-346 (472)
26 3khx_A Putative dipeptidase sa 99.9 1E-25 3.5E-30 217.2 17.7 254 4-287 64-379 (492)
27 1lfw_A PEPV; hydrolase, dipept 99.9 1.4E-24 4.9E-29 207.6 18.6 242 3-287 43-356 (470)
28 1q7l_A Aminoacylase-1; catalys 99.7 6.3E-17 2.2E-21 137.7 13.1 104 4-113 30-159 (198)
29 4h2k_A Succinyl-diaminopimelat 99.7 1.3E-16 4.3E-21 142.1 12.5 103 1-112 21-148 (269)
30 1tkj_A Aminopeptidase, SGAP; d 99.7 7.5E-17 2.6E-21 144.7 9.5 108 2-117 31-146 (284)
31 3tc8_A Leucine aminopeptidase; 99.6 8.6E-16 3E-20 139.4 13.0 108 2-115 44-185 (309)
32 3gux_A Putative Zn-dependent e 99.6 9E-16 3.1E-20 139.6 11.9 108 2-115 46-188 (314)
33 3t68_A Succinyl-diaminopimelat 99.6 5.8E-16 2E-20 137.6 9.1 102 2-112 22-148 (268)
34 1rtq_A Bacterial leucyl aminop 99.6 8.6E-16 2.9E-20 138.7 9.3 107 2-115 39-164 (299)
35 2afw_A Glutaminyl-peptide cycl 99.6 2.4E-15 8.4E-20 137.6 10.9 109 2-114 49-189 (329)
36 3pb6_X Glutaminyl-peptide cycl 99.5 4.1E-14 1.4E-18 129.3 10.1 107 2-114 57-193 (330)
37 2fvg_A Endoglucanase; TM1049, 99.5 1E-14 3.5E-19 133.9 3.3 99 2-112 14-207 (340)
38 4fuu_A Leucine aminopeptidase; 99.5 5.9E-13 2E-17 120.7 13.0 93 2-100 44-162 (309)
39 4f9u_A CG32412; alpha/beta hyd 99.4 3.9E-13 1.3E-17 122.0 11.2 110 2-115 28-163 (312)
40 2gre_A Deblocking aminopeptida 99.4 1E-13 3.5E-18 127.7 7.3 102 2-111 22-229 (349)
41 1vhe_A Aminopeptidase/glucanas 99.4 3.3E-13 1.1E-17 125.4 9.5 101 2-112 23-226 (373)
42 2wyr_A Cobalt-activated peptid 99.4 1.7E-13 5.9E-18 125.2 5.8 98 2-112 18-215 (332)
43 4fai_A CG5976, isoform B; alph 99.4 2.7E-12 9.1E-17 117.5 10.4 110 2-115 55-187 (330)
44 2wzn_A TET3, 354AA long hypoth 99.3 1.3E-16 4.4E-21 143.3 -19.4 90 2-100 25-130 (354)
45 1y0y_A FRV operon protein FRVX 99.3 1.3E-12 4.3E-17 120.5 6.7 51 2-55 22-73 (353)
46 2ek8_A Aminopeptidase; metallo 99.3 3.9E-12 1.3E-16 120.0 8.8 101 8-117 173-287 (421)
47 1ylo_A Hypothetical protein SF 99.2 1.1E-11 3.7E-16 113.8 7.6 93 2-100 19-204 (348)
48 1vho_A Endoglucanase; structur 99.2 1.4E-11 4.9E-16 113.0 8.1 102 2-114 21-216 (346)
49 3kl9_A PEPA, glutamyl aminopep 99.1 3.5E-11 1.2E-15 111.0 6.4 54 2-55 19-72 (355)
50 3iib_A Peptidase M28; YP_92679 99.1 3.8E-11 1.3E-15 114.1 6.6 83 28-117 235-318 (444)
51 3cpx_A Aminopeptidase, M42 fam 99.0 5E-11 1.7E-15 108.5 1.8 49 2-54 33-88 (321)
52 2vpu_A TET3, 354AA long hypoth 98.9 6.2E-10 2.1E-14 102.6 5.4 51 2-55 25-76 (354)
53 3fed_A Glutamate carboxypeptid 98.9 2.4E-09 8.1E-14 106.6 7.6 83 27-117 311-396 (707)
54 3isx_A Endoglucanase; TM1050, 98.8 7.1E-09 2.4E-13 95.0 6.9 52 1-55 26-77 (343)
55 3kas_A Transferrin receptor pr 98.8 7.5E-09 2.6E-13 102.1 7.3 82 27-116 265-350 (640)
56 3k9t_A Putative peptidase; str 96.8 0.0022 7.4E-08 59.6 6.6 64 35-115 174-237 (435)
57 2ijz_A Probable M18-family ami 93.1 0.031 1.1E-06 52.3 1.9 53 2-54 15-85 (428)
58 1y7e_A Probable M18-family ami 92.3 0.088 3E-06 49.7 3.7 52 2-54 32-99 (458)
59 2glf_A Probable M18-family ami 89.4 0.38 1.3E-05 45.2 5.1 53 2-54 30-96 (450)
60 2glj_A Probable M18-family ami 80.5 0.27 9.2E-06 46.4 -0.6 52 3-54 35-105 (461)
61 4efd_A Aminopeptidase; structu 64.7 29 0.00098 32.9 8.9 87 7-99 225-346 (522)
62 3kzw_A Cytosol aminopeptidase; 64.4 19 0.00065 34.1 7.7 86 8-99 219-339 (515)
63 3h8g_F Cytosol aminopeptidase; 51.4 1.2E+02 0.004 28.6 10.7 87 8-99 202-323 (497)
64 1gyt_A Cytosol aminopeptidase; 43.5 1.7E+02 0.006 27.5 10.7 89 7-99 202-326 (503)
65 2ek8_A Aminopeptidase; metallo 42.3 20 0.00067 32.8 3.9 27 2-28 34-60 (421)
66 3kr4_A M17 leucyl aminopeptida 41.9 2.1E+02 0.0071 27.1 10.7 89 8-99 227-350 (528)
67 3pei_A Cytosol aminopeptidase; 41.4 1.2E+02 0.0041 28.5 9.0 87 8-99 186-307 (486)
68 3iib_A Peptidase M28; YP_92679 40.2 22 0.00076 32.8 3.9 27 2-28 41-68 (444)
69 2glj_A Probable M18-family ami 39.4 11 0.00039 35.2 1.8 38 57-100 257-294 (461)
70 2zvy_A Chemotaxis protein MOTB 39.3 64 0.0022 25.9 6.2 52 44-98 92-148 (183)
71 1lam_A Leucine aminopeptidase; 38.4 2.4E+02 0.0082 26.4 10.6 87 8-99 183-306 (484)
72 3jru_B Probable cytosol aminop 32.4 2.8E+02 0.0095 26.0 10.0 86 8-99 198-318 (490)
73 4eme_A M18 aspartyl aminopepti 31.6 73 0.0025 30.6 6.0 53 2-54 20-91 (571)
74 2hc9_A Leucine aminopeptidase 30.6 3.4E+02 0.012 25.4 11.5 88 7-99 188-308 (491)
75 3ij3_A Cytosol aminopeptidase; 30.5 2.3E+02 0.0079 26.5 9.0 84 8-99 189-306 (482)
76 2zov_A Chemotaxis protein MOTB 29.6 88 0.003 25.7 5.6 52 44-98 103-159 (210)
77 3cyp_B Chemotaxis protein MOTB 29.1 1.1E+02 0.0036 23.1 5.6 53 43-98 37-92 (138)
78 3khn_A MOTB protein, putative; 28.8 1.2E+02 0.0042 23.7 6.2 53 43-98 83-139 (174)
79 1y7e_A Probable M18-family ami 28.0 11 0.00038 35.2 -0.3 38 58-100 252-289 (458)
80 2glf_A Probable M18-family ami 26.5 37 0.0012 31.6 2.9 37 57-100 245-281 (450)
81 2o8m_C Protease; NS3, NS4A, vi 25.0 66 0.0023 17.3 2.5 22 251-273 3-24 (26)
82 3s0y_A Motility protein B; pep 23.8 1.7E+02 0.0057 23.4 6.2 52 44-98 93-147 (193)
83 3lpe_A Putative transcription 22.7 68 0.0023 22.6 3.2 23 1-23 18-40 (92)
84 3vat_A Dnpep, aspartyl aminope 22.2 1.4E+02 0.0048 28.1 6.0 51 2-53 49-118 (496)
85 4erh_A Outer membrane protein 21.2 2.6E+02 0.0091 20.9 6.8 52 43-98 56-107 (148)
86 3oon_A Outer membrane protein 21.1 1E+02 0.0035 22.5 4.0 52 44-98 50-101 (123)
No 1
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=8.1e-45 Score=342.64 Aligned_cols=262 Identities=40% Similarity=0.709 Sum_probs=229.7
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCCCCCCCCcHHHHHHHHHHHHHHHHcC
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~g~~D~~~gv~a~l~a~~~L~~~~ 80 (291)
+|++|.++++||+++|+++|++++.|..+|++|+++|..++.|.|+|.+|+|+||.+|.+|+|+|++++|++++.|++.+
T Consensus 30 ~s~~e~~~~~~l~~~l~~~g~~~~~d~~gnv~a~~~g~~~~~~~i~l~aH~D~v~~~g~~d~~~g~a~~l~~~~~l~~~~ 109 (408)
T 3n5f_A 30 FTAEERRAKDLVASYMREAGLFVYEDAAGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEHG 109 (408)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCEEEECTTCCEEEEECCSSTTSCEEEEEEESCCCTTBCSSTTHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEcCCCCEEEEecCCCCCCCEEEEEecCCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999999886544689999999999999999999999999999999999988
Q ss_pred CCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCcHHHHHHHCCCChhhHHhhhhcCCCCceeeE
Q 022852 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGY 160 (291)
Q Consensus 81 ~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~e~l~~~g~~~~~~~~~~~~~~~~~i~a~ 160 (291)
. +++++|.|+|+++||+++|+.++.||+.+++.+.++.+.+.|.+|..+.+.|.+.|+.++. +.+...++..+.++
T Consensus 110 ~--~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~G~~~~~~l~~~G~~~~~--~~~~~~~~~~~~~~ 185 (408)
T 3n5f_A 110 V--VTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDR--LPQAARKPGTVKAY 185 (408)
T ss_dssp C--CCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGGGSCBCTTCCBHHHHHHHTTCCGGG--GGGGCCCTTTEEEE
T ss_pred C--CCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHHhhccCCCCCCHHHHHHHhCCChhh--hhhcccCccCccEE
Confidence 7 7899999999999998878778899999998887765677888999999999999997642 11111123367899
Q ss_pred EEeeeccCccccccCcccceEEcccCcEEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCC
Q 022852 161 IEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRS 240 (291)
Q Consensus 161 ~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~aHags~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~ 240 (291)
+++|++|++++++.+...+++.+++|..+++|+++|+++|||++||+.|+|||.++++++.+|+++..+
T Consensus 186 ~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~~~----------- 254 (408)
T 3n5f_A 186 VELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARR----------- 254 (408)
T ss_dssp EEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHHHH-----------
T ss_pred EEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHHHh-----------
Confidence 999999999888777788999999999999999999999976899448999999999999999988632
Q ss_pred CccccccCCCCceEEEEEEeecCCCcccccCceeEEEeecceeeEE
Q 022852 241 NCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLSLDDGYFLLY 286 (291)
Q Consensus 241 ~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~~~ 286 (291)
. .++++++|.|++|+.+.|+||++|+ +.+|+|+++..
T Consensus 255 -------~-~~~~~~vg~i~gG~~~~NvIP~~a~-~~~diR~~~~~ 291 (408)
T 3n5f_A 255 -------T-GTTVGTVGQLHVYPGGINVIPERVE-FVLDLRDLKAE 291 (408)
T ss_dssp -------H-SSCEEEEEEEEEESCCTTEECSEEE-EEEEEEESSHH
T ss_pred -------c-CCcEEEEEEEEecCCCCcCcCCeEE-EEEEEeCCCHH
Confidence 1 2789999999998789999999999 99999998643
No 2
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=5.6e-41 Score=322.46 Aligned_cols=257 Identities=28% Similarity=0.407 Sum_probs=217.2
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCCCCCCCCcHHHHHHHHHHHHHHHHcC
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~g~~D~~~gv~a~l~a~~~L~~~~ 80 (291)
+|++|.++++||.++|+++|++++++..+|++++++|.++ .++|+|.||+||||.+|.+|||++++++|++++.|++.+
T Consensus 65 ~s~~e~~~~~~l~~~l~~~G~~v~~d~~gnvia~~~g~~~-~~~i~l~~H~DtVp~~g~~D~k~gvaa~L~a~~~L~~~~ 143 (474)
T 2v8h_A 65 GTALDGAMRDWFTNECESLGCKVKVDKIGNMFAVYPGKNG-GKPTATGSHLDTQPEAGKYDGILGVLAGLEVLRTFKDNN 143 (474)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCEEEEBTTCCEEEEECCSSC-CSCEEEEECCCCCSSBCSSTTHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEecCceEEEEECCCCC-CCeEEEEEecccCCCCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999989999999987543 358999999999999999999999999999999999988
Q ss_pred CCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcch-hhhccC---CCCCcHHHHHHHCCCChhhHHhhhhcCCCCc
Q 022852 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVS-ALRVSD---KSGVTVLDALRENSIDIAEESLLQLKYDPAS 156 (291)
Q Consensus 81 ~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~-~~~~~d---~~g~~~~e~l~~~g~~~~~~~~~~~~~~~~~ 156 (291)
. +++++|+|+|+++||+++|+.++.|++.+.+.+..+ .+...| .+|..+.+.|.+.|+.++.+ ..+..+.
T Consensus 144 ~--~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~----~~~~~e~ 217 (474)
T 2v8h_A 144 Y--VPNYDVCVVVWFNAEGARFARSCTGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTP----ASYKENE 217 (474)
T ss_dssp C--CCSSCEEEEECTTCSCSSSSCTTHHHHHHTTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBC----SCTTTSC
T ss_pred C--CCCCCEEEEEECCccCCCCCCCcccHHHHHhccCHhhhhhhcccccccCccHHHHHHhcCCccccc----ccccccc
Confidence 7 789999999999999988877888999987655432 223345 67888888888778753211 0111245
Q ss_pred eeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhcCCCCCcc
Q 022852 157 VWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMS-MRQDPMTAAAELIVLLERLCKHPKDFLS 235 (291)
Q Consensus 157 i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~aHags~P~~-~g~nAi~~aa~~i~~l~~~~~~~~~~~~ 235 (291)
+.+++++|++|++.++..+...+++.+++|..+++|+++|+++|||..| + .|+|||.++++++.+|+.+..+
T Consensus 218 ~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v~G~~~Hsg~~P-~~~g~nAi~~~a~~i~~l~~~~~~------ 290 (474)
T 2v8h_A 218 IDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTP-WRLRKDALLMSSKMIVAASEIAQR------ 290 (474)
T ss_dssp CSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEEECCCEETTTCC-GGGCCCHHHHHHHHHHHHHHHHHH------
T ss_pred hhhheeeeeccCccccccCCcceeEEeecceEEEEEEEEeecCCCCCCC-cccCCCHHHHHHHHHHHHHHHHhh------
Confidence 7789999999998887766778888899999999999999999975579 7 8999999999999999887542
Q ss_pred cCCCCCccccccCCCCceEEEEEEeecCCCcccccCceeEEEeecceeeEE
Q 022852 236 YDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLSLDDGYFLLY 286 (291)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~~~ 286 (291)
. .+++++|.|++||++.|+||++|+ +.+|+|+.+..
T Consensus 291 -------------~-~~t~~vg~i~gG~~~~NvIP~~a~-~~~diR~~~~~ 326 (474)
T 2v8h_A 291 -------------H-NGLFTCGIIDAKPYSVNIIPGEVS-FTLDFRHPSDD 326 (474)
T ss_dssp -------------T-TCEEECCCEEEESCCTTEECSEEE-EEEEEEESCHH
T ss_pred -------------c-CCEEEEEEEEecCCCCceeCCEEE-EEEEecCCChH
Confidence 1 578999999999889999999999 99999998753
No 3
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=8.8e-41 Score=316.19 Aligned_cols=259 Identities=33% Similarity=0.512 Sum_probs=217.6
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCCCCCCCCcHHHHHHHHHHHHHHHHcC
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~g~~D~~~gv~a~l~a~~~L~~~~ 80 (291)
+|++|.++++||+++|+++|++++++..+|++++++|.+++.|+|+|.||+||||.+|.+|||++++++|++++.|++.+
T Consensus 34 ~s~~e~~~~~~i~~~l~~~G~~v~~~~~gnv~a~~~g~~~~~~~i~l~~H~D~Vp~~g~~D~k~g~a~~l~a~~~l~~~~ 113 (423)
T 1z2l_A 34 YSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQY 113 (423)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCEEEECTTSCEEEEECCSSEEEEEEEEEEECCCCTTBCSSTTHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEecCCcEEEEEcCCCCCCCEEEEEEecCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999998889999999875433478999999999999999999999999999999999887
Q ss_pred CCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcc-hhhhccCCCCCcHHHHHHHCCCCh-hhHHhhhhcCCCCcee
Q 022852 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPV-SALRVSDKSGVTVLDALRENSIDI-AEESLLQLKYDPASVW 158 (291)
Q Consensus 81 ~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~-~~~~~~d~~g~~~~e~l~~~g~~~-~~~~~~~~~~~~~~i~ 158 (291)
. +++++|+|+|+++||+++|+.++.|++.+...+.. ..+...|.++..+.+.+.+.|+.+ +.. ....+.+.
T Consensus 114 ~--~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~-----p~~~~~~~ 186 (423)
T 1z2l_A 114 G--APLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAP-----LTPRQDIK 186 (423)
T ss_dssp C--SCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSSC-----CCCCCCEE
T ss_pred C--CCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHHhhhcCcCCcCHHHHHHHcCCcccccc-----ccCCCCce
Confidence 6 78999999999999997777778899998876553 334556778899988888888742 000 00013467
Q ss_pred eEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhcCCCCCcccC
Q 022852 159 GYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMS-MRQDPMTAAAELIVLLERLCKHPKDFLSYD 237 (291)
Q Consensus 159 a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~aHags~P~~-~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~ 237 (291)
+++++|++|++++++.+...+++.+++|..+++|+++|+++||+++| + .|+|||.++++++.+|+++..+.
T Consensus 187 ~~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i~v~G~~~Ha~~~P-~~~g~nAi~~~a~~i~~l~~~~~~~------- 258 (423)
T 1z2l_A 187 AFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTP-MGYRRDTVYAFSRICHQSVEKAKRM------- 258 (423)
T ss_dssp EEEEEEECCSSHHHHTTCCEEEEEEECEEEEEEEEEECCCEETTTSC-GGGCCCHHHHHHHHHHHHHHHHHHH-------
T ss_pred EEEEEEeccCchHHHCCCCeEEEeeEecceEEEEEEEeEcCCCCCCc-cccCcCHHHHHHHHHHHHHHHHHhc-------
Confidence 88999999988777666677888899999999999999999975589 6 89999999999999999876431
Q ss_pred CCCCccccccCCCCceEEEEEEeecCCCcccccCceeEEEeecceeeEE
Q 022852 238 GRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLSLDDGYFLLY 286 (291)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~~~ 286 (291)
.+.+++++|.|++|+++.|+||++|+ +.+|+|+.+..
T Consensus 259 -----------~~~~~~~vg~i~gg~~~~NvIP~~a~-~~~d~R~~~~~ 295 (423)
T 1z2l_A 259 -----------GDPLVLTFGKVEPRPNTVNVVPGKTT-FTIDCRHTDAA 295 (423)
T ss_dssp -----------CTTCEEECCCEEEESCCTTEECCEEE-EEEEEEESSHH
T ss_pred -----------CCCceEEEEEEeecCCcceeECCEEE-EEEEeeCCCHH
Confidence 13678999999998789999999999 99999998754
No 4
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=1.3e-34 Score=272.00 Aligned_cols=211 Identities=12% Similarity=0.033 Sum_probs=168.7
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEEcccc---cEEEEEeCCCCCCCEEEEcccCCCCC---CCCCCCcHHHHHHHHHHHH
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLG---NVHGRVEGLNASAQALLIGSHLDTVV---DAGIFDGSLGIITAISALK 74 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~d~~g---nv~a~~~g~~~~~~~l~l~sH~DtV~---~~g~~D~~~gv~a~l~a~~ 74 (291)
+|++|.++++||+++|+++|++++++..+ |++|+++|.++ .|+|+|.||||+|| |+|++|++++++ |.+++
T Consensus 31 ~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~-g~~i~l~ah~D~vpg~~ha~G~d~~~a~~--l~aa~ 107 (394)
T 3ram_A 31 LGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLD-GPAIGFLAEYDALPGLGHACGHNIIGTAS--VLGAI 107 (394)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSS-SCEEEEEECCCCCTTTSSTTCHHHHHHHH--HHHHH
T ss_pred CCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCC-CCEEEEEEecccCCCcceECCccHHHHHH--HHHHH
Confidence 57899999999999999999999877654 89999987543 58999999999999 678999998765 88899
Q ss_pred HHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccch-hhhccCcchhhhccCCCCCcHHHHHHHCCCChhhHHhhhhcCC
Q 022852 75 VLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSA-ALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYD 153 (291)
Q Consensus 75 ~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~-~~~~~~~~~~~~~~d~~g~~~~e~l~~~g~~~~~~~~~~~~~~ 153 (291)
.|++.+. .++++|.|+|+++||++. +.|++ .+. +.|+.
T Consensus 108 ~L~~~~~--~~~g~v~~~f~~~EE~~~----~~Ga~~~~~-----------------------~~g~~------------ 146 (394)
T 3ram_A 108 GLKQVID--QIGGKVVVLGCPAEEGGE----NGSAKASYV-----------------------KAGVI------------ 146 (394)
T ss_dssp HHHTTHH--HHCSEEEEEECCCTTCCT----TCCHHHHHH-----------------------HHTGG------------
T ss_pred HHHHhHh--hCCceEEEEEECCccCCC----CCchHHHHH-----------------------HcCCc------------
Confidence 9987754 688999999999999741 23777 542 12221
Q ss_pred CCceeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCC
Q 022852 154 PASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDF 233 (291)
Q Consensus 154 ~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~aHags~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~ 233 (291)
+.+++++++|++++. ..+ .+++|..+++|+|+|+++||+++| +.|+|||.++++++..|+.+....
T Consensus 147 -~~~d~~~~~h~~~~~-------~~~--~~~~g~~~~~i~v~Gk~~Ha~~~P-~~g~nAi~~a~~~i~~l~~l~~~~--- 212 (394)
T 3ram_A 147 -DQIDIALMIHPGNET-------YKT--IDTLAVDVLDVKFYGKSAHASENA-DEALNALDAMISYFNGVAQLRQHI--- 212 (394)
T ss_dssp -GGCSEEECCEEESSB-------BCC--CCBCEEEEEEEEEECBCCBHHHHG-GGCBCHHHHHHHHHHHHHHHGGGS---
T ss_pred -ccCCEEEEECCcccc-------CCC--ccccceeEEEEEEEccccccCCCC-cCCCCHHHHHHHHHHHHHHHHhhC---
Confidence 123455668877642 122 358999999999999999964399 899999999999999999885431
Q ss_pred cccCCCCCccccccCCCCceEEEEEEeecCCCcccccCceeEEEeecceeeEE
Q 022852 234 LSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLSLDDGYFLLY 286 (291)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~~~ 286 (291)
...++++++.+++| ++.|+||++|+ +.+|+|+++..
T Consensus 213 ---------------~~~~~~~~~~i~gG-~~~NvIP~~a~-~~~~iR~~~~~ 248 (394)
T 3ram_A 213 ---------------KKDQRVHGVILDGG-KAANIIPDYTH-ARFYTRAMTRK 248 (394)
T ss_dssp ---------------CTTCEEEEEEEEBC-SCTTBCCSEEE-EEEEEEESSHH
T ss_pred ---------------CCCCeeEEEEEECC-CCCceeCCeEE-EEEEEeeCCHH
Confidence 23456788888988 99999999999 99999998753
No 5
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=1.3e-33 Score=269.13 Aligned_cols=212 Identities=21% Similarity=0.254 Sum_probs=165.2
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEEc----------------------------------------ccccEEEEEeCCCC
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWVD----------------------------------------HLGNVHGRVEGLNA 40 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~d----------------------------------------~~gnv~a~~~g~~~ 40 (291)
+|++|.+++++|+++|+++|++++.. ...||+|+++|.++
T Consensus 29 ~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vva~~~~~~~ 108 (445)
T 3io1_A 29 SGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAREQGAPERWLPAFEGGFAGVVATLDTGRP 108 (445)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTTCCTTTGGGGTTTCCCEEEEEECSSC
T ss_pred CCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhccccccccccccccCCCCEEEEEEeCCCC
Confidence 57899999999999999999998874 23679999987543
Q ss_pred CCCEEEEcccCCCCCC------------------------CCCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecC
Q 022852 41 SAQALLIGSHLDTVVD------------------------AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSD 96 (291)
Q Consensus 41 ~~~~l~l~sH~DtV~~------------------------~g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~d 96 (291)
.|+|+|.+|||+||. +|+||++ ++++|++++.|++.+. +++++|.|+|++|
T Consensus 109 -g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~--~a~~l~aa~~L~~~~~--~~~g~v~l~f~p~ 183 (445)
T 3io1_A 109 -GPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGH--TAIGLGLAHVLKQYAA--QLNGVIKLIFQPA 183 (445)
T ss_dssp -CCEEEEEEECCCCCC-------------------------CTTCTH--HHHHHHHHHHHHHTGG--GCCSEEEEEEESC
T ss_pred -CCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHH--HHHHHHHHHHHHhCcC--cCCceEEEEEecc
Confidence 589999999999993 2566654 5555999999998876 7899999999999
Q ss_pred CCCcccCCCcccchhhhccCcchhhhccCCCCCcHHHHHHHCCCChhhHHhhhhcCCCCceeeEEEeeeccCccccccCc
Q 022852 97 EEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGF 176 (291)
Q Consensus 97 EE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~e~l~~~g~~~~~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~ 176 (291)
||+++ |++.+. +.|+. +.+++++.+|+.++...+
T Consensus 184 EE~~~------Ga~~~i-----------------------~~g~~-------------~~~d~~~~~h~~~~~~~g---- 217 (445)
T 3io1_A 184 EEGTR------GARAMV-----------------------AAGVV-------------DDVDYFTAIHIGTGVPAG---- 217 (445)
T ss_dssp TTTTC------HHHHHH-----------------------HTTTT-------------TTCSEEEEEEEEEEEETT----
T ss_pred ccccc------hHHHHH-----------------------HcCCc-------------cccceeEEEeccCCCCCC----
Confidence 99743 777542 23321 123345557765432211
Q ss_pred ccceEEcccC---cEEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCce
Q 022852 177 PLGVVQGIAG---QTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLV 253 (291)
Q Consensus 177 ~~gi~~~~~G---~~~~~i~v~Gk~aHags~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (291)
.+..+.+| ..+++|+|+|+++|||++| +.|+|||.++++++.+|+.+... ..+.++
T Consensus 218 --~i~~~~~g~~a~~~~~i~v~Gk~~HaGs~P-~~g~nAi~~aa~~i~~l~~l~~~------------------~~~~~~ 276 (445)
T 3io1_A 218 --TVVCGGDNFMATTKFDVQFSGVAAHAGGKP-EDGRNALLAAAQAALGLHAIPPH------------------SAGASR 276 (445)
T ss_dssp --BEESCCCCBCEEEEEEEEEECCCSSTTCCG-GGCCCHHHHHHHHHHHHHTCCCB------------------TTBCEE
T ss_pred --eEEEecCCeeEEEEEEEEEEeecCCCCCCC-cCCcCHHHHHHHHHHHHHHHHhh------------------cCCCeE
Confidence 12333444 4799999999999977999 89999999999999999987421 124688
Q ss_pred EEEEEEeecCCCcccccCceeEEEeecceeeEE
Q 022852 254 CTVGEISSWPSASNVIPGEARNLSLDDGYFLLY 286 (291)
Q Consensus 254 ~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~~~ 286 (291)
+|+|.|++| ++.|+||++|+ +.+|+|+++..
T Consensus 277 ~~vg~i~gG-~~~NvIP~~a~-~~~~iR~~~~~ 307 (445)
T 3io1_A 277 VNVGVMQAG-TGRNVVPSSAL-LKVETRGESEA 307 (445)
T ss_dssp EEEEEEEEC-SCTTSCCCEEE-EEEEEEESSHH
T ss_pred EEEEEEecC-CCCceeCCeEE-EEEEEecCCHH
Confidence 999999999 99999999999 99999998754
No 6
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=7e-33 Score=260.88 Aligned_cols=218 Identities=21% Similarity=0.305 Sum_probs=160.3
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEEcccc--cEEEEEeCCCCCCCEEEEcccCCCCCCC------------C---CCCcH
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLG--NVHGRVEGLNASAQALLIGSHLDTVVDA------------G---IFDGS 63 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~d~~g--nv~a~~~g~~~~~~~l~l~sH~DtV~~~------------g---~~D~~ 63 (291)
+|++|.++++||.++|+++|++++.+..+ |++++++|..+ .|.|+|.+|+||||.+ | +.++|
T Consensus 47 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~-~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~k 125 (404)
T 1ysj_A 47 LSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGRED-GPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHD 125 (404)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSC-CCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHH
T ss_pred CCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCC-CCEEEEEEecccccCCCCCCCCcccCCCCceEcCcCh
Confidence 47789999999999999999998776665 89999987533 4899999999999964 2 13467
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCcHHHHHHHCCCChh
Q 022852 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIA 143 (291)
Q Consensus 64 ~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~e~l~~~g~~~~ 143 (291)
++++++|++++.|++.+. .++++|.|+|+++||+. .|++.+.. .++.
T Consensus 126 g~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~~------~G~~~~~~-----------------------~g~~-- 172 (404)
T 1ysj_A 126 FHTASIIGTAMLLNQRRA--ELKGTVRFIFQPAEEIA------AGARKVLE-----------------------AGVL-- 172 (404)
T ss_dssp HHHHHHHHHHHHHHTCGG--GCSSEEEEEEESCTTTT------CHHHHHHH-----------------------TTTT--
T ss_pred HHHHHHHHHHHHHHhccc--cCCceEEEEEecccccc------hhHHHHHh-----------------------cCCC--
Confidence 899999999999998765 68899999999999983 28876531 2211
Q ss_pred hHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEc--ccCcEEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHH
Q 022852 144 EESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQG--IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIV 221 (291)
Q Consensus 144 ~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~--~~G~~~~~i~v~Gk~aHags~P~~~g~nAi~~aa~~i~ 221 (291)
+.+++++.+|+||+...+. +.+..| ++|..+++|+++|+++|| +.| +.|+|||.++++++.
T Consensus 173 -----------~~~d~~i~~h~ep~~~~g~----v~~~~g~~~~g~~~~~i~v~G~~~Ha-s~P-~~g~nAi~~~~~~i~ 235 (404)
T 1ysj_A 173 -----------NGVSAIFGMHNKPDLPVGT----IGVKEGPLMASVDRFEIVIKGKGGHA-SIP-NNSIDPIAAAGQIIS 235 (404)
T ss_dssp -----------TTEEEEEEEEEETTSCTTE----EEECSEEEECCEEEEEEEEECC----------CCCCHHHHHHHHHH
T ss_pred -----------cCCCEEEEEecCCCCCCce----EEeccChhhcccceEEEEEEccCccc-cCc-ccCCCHHHHHHHHHH
Confidence 1244566799987532211 111123 689999999999999995 799 999999999999999
Q ss_pred HHHHHhcCCCCCcccCCCCCccccccCCCCceEEEEEEeecCCCcccccCceeEEEeecceeeEE
Q 022852 222 LLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLSLDDGYFLLY 286 (291)
Q Consensus 222 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~~~ 286 (291)
+|+++..+.. +| ...+++++|.|++| ++.|+||++|+ +.+|+|+.+..
T Consensus 236 ~l~~~~~~~~--------------~~-~~~~~~~vg~i~gG-~~~NvIP~~a~-~~~diR~~~~~ 283 (404)
T 1ysj_A 236 GLQSVVSRNI--------------SS-LQNAVVSITRVQAG-TSWNVIPDQAE-MEGTVRTFQKE 283 (404)
T ss_dssp HHC--------------------------CCEEEEEEEEEC-SCSSSCCSEEE-EEEEEECSSHH
T ss_pred HHHHHHhhhc--------------CC-CCCcEEEEEEEEcC-CCCceecCceE-EEEEEecCCHH
Confidence 9987643311 12 34689999999998 99999999999 99999998753
No 7
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=4.1e-33 Score=259.32 Aligned_cols=208 Identities=20% Similarity=0.311 Sum_probs=167.2
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEEccc--------ccEEEEEeCCCCCCCEEEEcccCCCCCCCC--------------
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWVDHL--------GNVHGRVEGLNASAQALLIGSHLDTVVDAG-------------- 58 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~d~~--------gnv~a~~~g~~~~~~~l~l~sH~DtV~~~g-------------- 58 (291)
+|++|.++++||+++|+++|++++.+.. +|++|+++|.+++.|+|+|.+|||+||.++
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~ 100 (373)
T 3gb0_A 21 ETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSD 100 (373)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSSCSSCCCEEETTEEECC
T ss_pred CCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCCCCCcCcEEECCEEECC
Confidence 4789999999999999999999988764 799999987633468999999999998542
Q ss_pred CC-----CcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCcHHH
Q 022852 59 IF-----DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLD 133 (291)
Q Consensus 59 ~~-----D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~e 133 (291)
++ |||++++++|++++.|++.+ .++++|.|+|+++||.+ +.|++.+..
T Consensus 101 G~~~~g~D~k~g~a~~l~a~~~l~~~~---~~~~~v~~~~~~~EE~g-----~~Ga~~~~~------------------- 153 (373)
T 3gb0_A 101 GTTILGADDKAGLASMFEAIRVLKEKN---IPHGTIEFIITVGEESG-----LVGAKALDR------------------- 153 (373)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHTT---CCCCCEEEEEESCGGGT-----SHHHHHSCG-------------------
T ss_pred CccccCcccHHHHHHHHHHHHHHHhcC---CCCCCEEEEEEeccccC-----chhhhhhCH-------------------
Confidence 33 99999999999999999876 36799999999999973 247775410
Q ss_pred HHHHCCCChhhHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecCCCCCCCCCCCCCCHH
Q 022852 134 ALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPM 213 (291)
Q Consensus 134 ~l~~~g~~~~~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~aHags~P~~~g~nAi 213 (291)
.++ +..++ +|.+++.. ...++++.+|..+++|+++|+++||+..| +.|+|||
T Consensus 154 ----~~~--------------~~~~~---~~~~~~~~------~g~i~~~~~g~~~~~i~~~G~~~Ha~~~p-~~g~nai 205 (373)
T 3gb0_A 154 ----ERI--------------TAKYG---YALDSDGK------VGEIVVAAPTQAKVNAIIRGKTAHAGVAP-EKGVSAI 205 (373)
T ss_dssp ----GGC--------------CCSEE---EEEEECSC------TTEEEEEECEEEEEEEEEECBCCBTTTCG-GGSBCHH
T ss_pred ----Hhc--------------CCCEE---EEEcCCCC------CCeEEEcCCCcEEEEEEEEeEecCCCCCh-hhCcCHH
Confidence 011 11223 66665422 23566788999999999999999964489 9999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCceEEEEEEeecCCCcccccCceeEEEeecceeeE
Q 022852 214 TAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLSLDDGYFLL 285 (291)
Q Consensus 214 ~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~~ 285 (291)
.++++++.+|+.. + ..+..++++|.|++| .+.|+||++|+ +.+|+|+++.
T Consensus 206 ~~~~~~i~~l~~~--~------------------~~~~~~~~vg~i~gG-~~~Nvip~~~~-~~~d~R~~~~ 255 (373)
T 3gb0_A 206 TIAAKAIAKMPLG--R------------------IDSETTANIGRFEGG-TQTNIVCDHVQ-IFAEARSLIN 255 (373)
T ss_dssp HHHHHHHTTSCCE--E------------------EETTEEEEEEEEEEC-SCTTBCCCEEE-EEEEEEESSH
T ss_pred HHHHHHHHhcccc--c------------------CCCccccceeEEecC-cccccccceEE-EEEEEecCCH
Confidence 9999999877541 1 124678999999999 99999999999 9999998764
No 8
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=3.3e-32 Score=255.18 Aligned_cols=221 Identities=20% Similarity=0.245 Sum_probs=168.3
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEE---cccccEEEEEeCCCCCCCEEEEcccCCCCCCC--------------------
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWV---DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~---d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~-------------------- 57 (291)
+|++|.++++||+++|+++|++++. +..+|+++++ |. +.|+|+|.||+||||.+
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~--~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~ 97 (393)
T 1vgy_A 21 VTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRR-GT--KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLY 97 (393)
T ss_dssp BTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CS--SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEE
T ss_pred CCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEE-CC--CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEE
Confidence 3678899999999999999999887 4568999998 64 35899999999999864
Q ss_pred -CCC-CcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCcHHHHH
Q 022852 58 -GIF-DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (291)
Q Consensus 58 -g~~-D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~e~l 135 (291)
+++ |||++++++|++++.|++.+. +++++|+|+|+++||+++ +.|++.+. +.+
T Consensus 98 grG~~D~k~~~aa~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~~~----~~Ga~~~~-------------------~~~ 152 (393)
T 1vgy_A 98 GRGAADMKTSIACFVTACERFVAKHP--NHQGSIALLITSDEEGDA----LDGTTKVV-------------------DVL 152 (393)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCSSSCC----TTSHHHHH-------------------HHH
T ss_pred ecCcccchHHHHHHHHHHHHHHHhcC--CCCCcEEEEEEeccccCC----cCCHHHHH-------------------HHH
Confidence 233 999999999999999998776 789999999999999742 34877653 122
Q ss_pred HHCCCChhhHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecCCCCCCCCCCCCCCHHHH
Q 022852 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (291)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~aHags~P~~~g~nAi~~ 215 (291)
...+..+ ... +..+|+.... .+ ..+..+++|..+++|+++|+++|| +.| +.|+|||.+
T Consensus 153 ~~~~~~~---------------d~~--i~~e~~~~~~-~g--~~i~~g~~G~~~~~i~v~G~~~Ha-~~P-~~g~nAi~~ 210 (393)
T 1vgy_A 153 KARDELI---------------DYC--IVGEPTAVDK-LG--DMIKNGRRGSLSGNLTVKGKQGHI-AYP-HLAINPVHT 210 (393)
T ss_dssp HHTTCCE---------------EEE--EECCCCBSSS-TT--SEEECEECEEEEEEEEEECBCEET-TCG-GGCBCHHHH
T ss_pred HhcCcCC---------------CEE--EEeCCCCccc-CC--ceeEEeeeeEEEEEEEEEccCccc-CCC-ccCCCHHHH
Confidence 2222221 111 2224432110 01 114567899999999999999995 689 999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCceEEEEEEeecCCCcccccCceeEEEeecceeeEE
Q 022852 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLSLDDGYFLLY 286 (291)
Q Consensus 216 aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~~~ 286 (291)
+++++.+|+.+..+... +...+++++++.|++|+.+.|+||++|+ +.+|+|+++..
T Consensus 211 ~a~~i~~l~~~~~~~~~--------------~~~~~~~~~v~~i~gG~~~~NviP~~a~-~~~diR~~~~~ 266 (393)
T 1vgy_A 211 FAPALLELTQEVWDEGN--------------EYFPPTSFQISNINGGTGATNVIPGELN-VKFNFRFSTES 266 (393)
T ss_dssp HHHHHHHHHHCCCCCCC--------------SSCCCCEEEEEEEEECCSCTTEECSEEE-EEEEEEECTTS
T ss_pred HHHHHHHhhcccccccc--------------cccCCCeEEEeeEcCCCCCCcccCCeEE-EEEEEecCCCC
Confidence 99999999886432110 1235679999999999448999999999 99999998753
No 9
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=2.2e-32 Score=253.43 Aligned_cols=211 Identities=19% Similarity=0.190 Sum_probs=168.4
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCCCC-------------------CCC-
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------GIF- 60 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~-------------------g~~- 60 (291)
.|++|.++++||.++|+++|++++.+ .+|++++++|...+.|.|+|.+|+|+||.+ +++
T Consensus 26 ~s~~e~~~~~~l~~~l~~~g~~~~~~-~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~ 104 (356)
T 3ct9_A 26 ISREETQAADFLQNYIEAEGMQTGRK-GNNVWCLSPMFDLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSN 104 (356)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCCEEEE-TTEEEEECSSCCTTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTT
T ss_pred CCCChHHHHHHHHHHHHHCCCeEEEE-eeeEEEEEecCCCCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcc
Confidence 36789999999999999999999877 789999998733346899999999999863 233
Q ss_pred CcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCcHHHHHHHCCC
Q 022852 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (291)
Q Consensus 61 D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~e~l~~~g~ 140 (291)
|+|++++++|++++.|++.+ ++++|.|+|+++||.+ ++.|++.+... +.
T Consensus 105 D~k~g~a~~l~a~~~l~~~~----~~~~v~~~~~~~EE~~----g~~G~~~~~~~-----------------------~~ 153 (356)
T 3ct9_A 105 DAGASVVSLLQVFLQLCRTS----QNYNLIYLASCEEEVS----GKEGIESVLPG-----------------------LP 153 (356)
T ss_dssp TTHHHHHHHHHHHHHHTTSC----CSSEEEEEEECCGGGT----CTTTHHHHGGG-----------------------SC
T ss_pred cchHHHHHHHHHHHHHHhcC----CCCCEEEEEEeCcccC----CccCHHHHHhh-----------------------CC
Confidence 99999999999999998764 6789999999999972 12488865421 10
Q ss_pred ChhhHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHH
Q 022852 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (291)
Q Consensus 141 ~~~~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~aHags~P~~~g~nAi~~aa~~i 220 (291)
. ++ ++ +|.||+. ..++.+++|..+++|+++|+++|| +.| .|+|||.++++++
T Consensus 154 ~------------~d--~~---i~~ep~~--------~~i~~~~~G~~~~~i~~~G~~~Ha-~~p--~g~nAi~~~~~~i 205 (356)
T 3ct9_A 154 P------------VS--FA---IVGEPTE--------MQPAIAEKGLMVLDVTATGKAGHA-ARD--EGDNAIYKVLNDI 205 (356)
T ss_dssp C------------CS--EE---EECCSBT--------TCCEEEECCCEEEEEEEECBCCBT-TSS--CCBCTTGGGHHHH
T ss_pred C------------CC--EE---EEcCCCC--------ceEEEeeeEEEEEEEEEECCCccc-CCC--CCCCHHHHHHHHH
Confidence 0 11 22 5666642 235567999999999999999995 678 7999999999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCccccccCCCCceEEEEEEeecCCCcccccCceeEEEeecceeeEEe
Q 022852 221 VLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLSLDDGYFLLYS 287 (291)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~~~~ 287 (291)
.+|+.+..+.. +|..+.+++++|.|++| .+.|+||++|+ +.+|+|+++..+
T Consensus 206 ~~l~~~~~~~~--------------~~~~~~~~~~vg~i~gG-~~~NviP~~a~-~~~~iR~~~~~~ 256 (356)
T 3ct9_A 206 AWFRDYRFEKE--------------SPLLGPVKMSVTVINAG-TQHNVVPDKCT-FVVDIRSNELYS 256 (356)
T ss_dssp HHHHHCCCSCC--------------BTTTBSCEEEEEEEEEC-SSTTBCCSEEE-EEEEEECCTTCC
T ss_pred HHHHhhhcccc--------------cccCCCCcEEeeEEecC-CcCCcCCCceE-EEEEEeeCCCCC
Confidence 99998654321 12345789999999999 99999999999 999999987543
No 10
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=2.1e-32 Score=258.75 Aligned_cols=217 Identities=21% Similarity=0.265 Sum_probs=155.1
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEEcc-cccEEEEEeCCCCCCCEEEEcccCCCCCCC------------CC---CCcHH
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWVDH-LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------GI---FDGSL 64 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~d~-~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~------------g~---~D~~~ 64 (291)
.|++|.++++||+++|+++|++++.+. .+|++++++|.. . |.|+|.+|+|+||.+ |. .++++
T Consensus 43 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~-~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~ 120 (418)
T 1xmb_A 43 LGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGE-P-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDG 120 (418)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSS-S-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHH
T ss_pred CCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCC-C-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchH
Confidence 477899999999999999999988765 689999998753 3 799999999999964 21 23458
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCcHHHHHHHCCCChhh
Q 022852 65 GIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAE 144 (291)
Q Consensus 65 gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~e~l~~~g~~~~~ 144 (291)
+++++|++++.|++.+. .++++|.|+|+++||+. .|++.+.. .+..
T Consensus 121 ~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EEg~------~G~~~~~~-----------------------~g~~--- 166 (418)
T 1xmb_A 121 HVTMLLGAAKILHEHRH--HLQGTVVLIFQPAEEGL------SGAKKMRE-----------------------EGAL--- 166 (418)
T ss_dssp HHHHHHHHHHHHHHTGG--GCSSEEEEEEECCTTTT------CHHHHHHH-----------------------TTTT---
T ss_pred HHHHHHHHHHHHHhccc--cCCceEEEEEecccccc------ccHHHHHH-----------------------cCCc---
Confidence 99999999999999876 68899999999999942 38776531 2210
Q ss_pred HHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 022852 145 ESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE 224 (291)
Q Consensus 145 ~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~aHags~P~~~g~nAi~~aa~~i~~l~ 224 (291)
+.+++.+.+|++++...+. ....+..+++|..+++|+++|+++|| ++| +.|+|||.++++++.+|+
T Consensus 167 ----------~~~d~~i~~~~~~~~~~g~--~~~~~~~~~~g~~~~~i~v~G~~~Ha-s~P-~~g~nAi~~~a~~i~~l~ 232 (418)
T 1xmb_A 167 ----------KNVEAIFGIHLSARIPFGK--AASRAGSFLAGAGVFEAVITGKGGHA-AIP-QHTIDPVVAASSIVLSLQ 232 (418)
T ss_dssp ----------TTEEEEEEEEEEEEEETTC--EEECSEEEECEEEEEEEEEEEC-----------CCHHHHHHHHHHHHHH
T ss_pred ----------CCCCEEEEEecCCCCCCce--eEeeeccccccceeEEEEEEecCccc-CCC-ccCCCHHHHHHHHHHHHH
Confidence 1234566688876533221 11233456899999999999999995 599 899999999999999998
Q ss_pred HHhcCCCCCcccCCCCCccccccCCCCceEEEEEEeecCCCcccccCceeEEEeecceee
Q 022852 225 RLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLSLDDGYFL 284 (291)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~ 284 (291)
.+..+..+ + ..++++++|.|+|| .+.|+||++|+ +.+|+|+++
T Consensus 233 ~~~~~~~~--------------~-~~~~t~~vg~i~gG-~~~NvIP~~a~-~~~diR~~~ 275 (418)
T 1xmb_A 233 QLVSRETD--------------P-LDSKVVTVSKVNGG-NAFNVIPDSIT-IGGTLRAFT 275 (418)
T ss_dssp TTCBCCSS--------------G-GGCEEEEEEEEC---------CCEEE-EEEEEEESS
T ss_pred HHHhcccC--------------C-CCCcEEEEEEEEec-CcCCcCCCeEE-EEEEEccCc
Confidence 76543211 2 24679999999999 99999999999 999999987
No 11
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.2e-32 Score=260.99 Aligned_cols=222 Identities=17% Similarity=0.186 Sum_probs=170.4
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEE----------------------cccccEEEEEeCCCCCCCEEEEcccCCCCCCC-
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWV----------------------DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA- 57 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~----------------------d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~- 57 (291)
.|++|.++++||+++|+++|++++. +..+||+|+++|.. ..|+|+|.+||||||.+
T Consensus 41 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~~~g~~-~~~~v~l~aH~D~vp~~~ 119 (433)
T 3pfo_A 41 VRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADSDG-KGRSLILQGHIDVVPEGP 119 (433)
T ss_dssp BTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGGGCEEEEEEECCCC-CSCCEEEEEECCBCCCCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCCCCcEEEEEEecCC-CCCEEEEEcccCCcCCCC
Confidence 3788999999999999999999865 23468999998643 46899999999999864
Q ss_pred ---------------------CCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccC
Q 022852 58 ---------------------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGIL 116 (291)
Q Consensus 58 ---------------------g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~ 116 (291)
|..|||++++++|++++.|++.+. +++++|.|+|+++||.++ .|++.+.
T Consensus 120 ~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g~-----~G~~~~~--- 189 (433)
T 3pfo_A 120 VDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGY--APDARVHVQTVTEEESTG-----NGALSTL--- 189 (433)
T ss_dssp GGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTE--EESSCEEEEEESCTTTTC-----HHHHHHH---
T ss_pred cccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCC--CCCccEEEEEEecCccCC-----hhHHHHH---
Confidence 557999999999999999999876 688999999999999842 3666431
Q ss_pred cchhhhccCCCCCcHHHHHHHCCCChhhHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEe
Q 022852 117 PVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG 196 (291)
Q Consensus 117 ~~~~~~~~d~~g~~~~e~l~~~g~~~~~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~G 196 (291)
+.++.+ +. + +..||+ . ..++.+++|..+++|+++|
T Consensus 190 --------------------~~~~~~------------d~--~---i~~ep~------~--~~i~~~~~G~~~~~i~v~G 224 (433)
T 3pfo_A 190 --------------------MRGYRA------------DA--C---LIPEPT------G--HTLTRAQVGAVWFRLRVRG 224 (433)
T ss_dssp --------------------HTTCCC------------SE--E---EECCCC------S--SCEEEEECEEEEEEEEEEC
T ss_pred --------------------hcCCCC------------CE--E---EEeCCC------C--CceEEecceEEEEEEEEEc
Confidence 123221 11 1 333442 1 2567789999999999999
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCceEEEEEEeecCCCcccccCceeEE
Q 022852 197 SQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNL 276 (291)
Q Consensus 197 k~aHags~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~ 276 (291)
+++|| ++| +.|+|||.++++++.+|+++..+...... .+..+.....+.++++|.|++| .+.|+||++|+ +
T Consensus 225 ~~~Ha-~~p-~~g~nAi~~~~~~i~~l~~l~~~~~~~~~-----~~~~~~~~~~~~~~~vg~i~gG-~~~NvIP~~a~-~ 295 (433)
T 3pfo_A 225 TPVHV-AYS-ETGTSAILSAMHLIRAFEEYTKELNAQAV-----RDPWFGQVKNPIKFNVGIIKGG-DWASSTAAWCE-L 295 (433)
T ss_dssp CCCBG-GGG-GGSCCHHHHHHHHHHHHHHHHHHHHHHGG-----GCTTTTTSSSCSCEEEEEEEEC-SCTTBCCCEEE-E
T ss_pred CCCcc-CCC-CcCcCHHHHHHHHHHHHHHHHHHhhhccc-----cCccccccCCCceEEeeeEECC-CCCcccCcEEE-E
Confidence 99996 599 99999999999999999987643110000 0000000124679999999999 89999999999 9
Q ss_pred EeecceeeEEe
Q 022852 277 SLDDGYFLLYS 287 (291)
Q Consensus 277 ~~D~r~~~~~~ 287 (291)
.+|+|+++..+
T Consensus 296 ~~~iR~~~~~~ 306 (433)
T 3pfo_A 296 DCRLGLLTGDT 306 (433)
T ss_dssp EEEEEECTTCC
T ss_pred EEEEecCCCCC
Confidence 99999987554
No 12
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=2.3e-32 Score=254.02 Aligned_cols=208 Identities=17% Similarity=0.161 Sum_probs=165.5
Q ss_pred HhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCC-CCCCCEEEEcccCCCCCC----------C-----CCC-CcHHH
Q 022852 3 PASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGL-NASAQALLIGSHLDTVVD----------A-----GIF-DGSLG 65 (291)
Q Consensus 3 ~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~-~~~~~~l~l~sH~DtV~~----------~-----g~~-D~~~g 65 (291)
++|.++++||.++|+++|++++.+. +|++++++|. ....|+|+|.+|+||||. + +++ |||++
T Consensus 26 ~~e~~~~~~l~~~l~~~G~~~~~~~-~~~~~~~~~~~~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~ 104 (364)
T 2rb7_A 26 EQISRCAGFIMDWCAQNGIHAERMD-HDGIPSVMVLPEKGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYA 104 (364)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEE-ETTEEEEEECSBTTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHH
T ss_pred chHHHHHHHHHHHHHHcCCeEEEec-CCCceEEEEEcCCCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHH
Confidence 7899999999999999999987654 7899988752 224588999999999985 2 344 99999
Q ss_pred HHHHHHHHHHHHHcCCCCCC---CCC--EEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCcHHHHHHHCCC
Q 022852 66 IITAISALKVLKSTGKLGKL---KRP--VEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (291)
Q Consensus 66 v~a~l~a~~~L~~~~~~~~~---~~~--i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~e~l~~~g~ 140 (291)
++++|++++.|++.+. ++ +++ |.|+|+++||.+ ++.|++.+... +
T Consensus 105 ~a~~l~a~~~l~~~~~--~~~~~~g~~~v~~~~~~~EE~~----g~~G~~~~~~~-----------------------~- 154 (364)
T 2rb7_A 105 VALGLVMFRDRLNALK--AAGRSQKDMALGLLITGDEEIG----GMNGAAKALPL-----------------------I- 154 (364)
T ss_dssp HHHHHHHHHHHHHHHH--HTTCCGGGCCEEEEEESCGGGT----STTTHHHHGGG-----------------------C-
T ss_pred HHHHHHHHHHHHHhCC--CCcccCCCccEEEEEEeccccC----chhhHHHHHhc-----------------------C-
Confidence 9999999999998764 55 568 999999999963 23477765321 1
Q ss_pred ChhhHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHH
Q 022852 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (291)
Q Consensus 141 ~~~~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~aHags~P~~~g~nAi~~aa~~i 220 (291)
. .-++ +|++++.+ .+++++++|..+++|+++|+++|| +.| +.|+|||.++++++
T Consensus 155 ~--------------~d~~---i~~d~~~p-------~~i~~~~~G~~~~~i~v~G~~~Ha-~~P-~~g~nAi~~~~~~i 208 (364)
T 2rb7_A 155 R--------------ADYV---VALDGGNP-------QQVITKEKGIIDIKLTCTGKAAHG-ARP-WMGVNAVDLLMEDY 208 (364)
T ss_dssp E--------------EEEE---EECSSSBT-------TEEEEEECEEEEEEEEEECBCEET-TSG-GGSBCHHHHHHHHH
T ss_pred C--------------CCEE---EEccCCcc-------cceEEEeeeEEEEEEEEEeecccC-CCC-CCCcCHHHHHHHHH
Confidence 1 0123 67654322 126778999999999999999995 679 89999999999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCccccccCC--CCceEEEEEEeecCCCcccccCceeEEEeecceeeEE
Q 022852 221 VLLERLCKHPKDFLSYDGRSNCSTLESLS--SSLVCTVGEISSWPSASNVIPGEARNLSLDDGYFLLY 286 (291)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~~~ 286 (291)
.+|+.+... +.. +.+++|+|.|++| .+.|+||++|+ +.+|+|+++..
T Consensus 209 ~~l~~~~~~-----------------~~~~~~~~~~~vg~i~gG-~~~NviP~~a~-~~~~iR~~~~~ 257 (364)
T 2rb7_A 209 TRLKTLFAE-----------------ENEDHWHRTVNLGRIRAG-ESTNKVPDVAE-GWFNIRVTEHD 257 (364)
T ss_dssp HHHHTTSCC-----------------CCTTCCSCEEEEEEEEEC-SCTTEECSEEE-EEEEEEECTTS
T ss_pred HHHHhhccc-----------------hhhcCCCceEEEEEEecC-CcCcccCcceE-EEEEEeeCCCC
Confidence 999876221 122 5789999999999 99999999999 99999998754
No 13
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2e-32 Score=256.96 Aligned_cols=208 Identities=19% Similarity=0.234 Sum_probs=166.1
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEEcc--------cccEEEEEeCC--CCCCCEEEEcccCCCCCCC-------------
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWVDH--------LGNVHGRVEGL--NASAQALLIGSHLDTVVDA------------- 57 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~d~--------~gnv~a~~~g~--~~~~~~l~l~sH~DtV~~~------------- 57 (291)
.|++|.++++||+++|+++|++++++. .+|++|+++|. .++.|+|+|.+|||+||.+
T Consensus 39 ~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~ 118 (396)
T 3rza_A 39 ETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYI 118 (396)
T ss_dssp BTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCCEEEEEECCBCSSCSSCCCEECTTSEE
T ss_pred CCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCeEEEEEECCccCCCCCcceEEecCCEE
Confidence 378899999999999999999998876 47999999875 2346899999999999843
Q ss_pred --CCC-----CcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCc
Q 022852 58 --GIF-----DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130 (291)
Q Consensus 58 --g~~-----D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~ 130 (291)
+++ |||++++++|++++.|++.+. ++++|.|+|+++||.+ +.|++.+..
T Consensus 119 ~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~---~~~~v~~~~~~~EE~g-----~~Ga~~~~~---------------- 174 (396)
T 3rza_A 119 YSDGTTILGADDKAGLAAMLEVLQVIKEQQI---PHGQIQFVITVGEESG-----LIGAKELNS---------------- 174 (396)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC---CCCCEEEEEESCGGGT-----SHHHHHCCG----------------
T ss_pred ECCCccccCcccHHHHHHHHHHHHHHHhcCC---CCCCEEEEEEcccccc-----cHhHhhhch----------------
Confidence 344 999999999999999998763 6799999999999973 247775421
Q ss_pred HHHHHHHCCCChhhHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecCCCCCCCCCCCCC
Q 022852 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQ 210 (291)
Q Consensus 131 ~~e~l~~~g~~~~~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~aHags~P~~~g~ 210 (291)
.++ +..++ +|.+++.. ...++++.+|..+++|+++|+++|| +.| +.|+
T Consensus 175 -------~~~--------------~~~~~---~~~~~~~~------~g~i~~~~~g~~~~~i~v~G~~~Ha-~~p-~~g~ 222 (396)
T 3rza_A 175 -------ELL--------------DADFG---YAIDASAD------VGTTVVGAPTQMLISAKIIGKTAHA-STP-KEGV 222 (396)
T ss_dssp -------GGC--------------CCSEE---EEEEESSC------TTCEEEEECEEEEEEEEEECBCCBT-TSG-GGSB
T ss_pred -------hhc--------------ccceE---EEEecCCC------cceEEEcCCceEEEEEEEEeEecCC-CCc-cccc
Confidence 011 11223 66666432 2356678999999999999999996 599 8999
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCceEEEEEEeecCCCcccccCceeEEEeecceeeEE
Q 022852 211 DPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLSLDDGYFLLY 286 (291)
Q Consensus 211 nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~~~ 286 (291)
|||.++++++.+|+... ..+..++++|.|++| .+.|+||++|+ +.+|+|+++..
T Consensus 223 nai~~~~~~i~~l~~~~--------------------~~~~~~~~vg~i~gG-~~~NvIP~~a~-~~~diR~~~~~ 276 (396)
T 3rza_A 223 SAINIAAKAISRMKLGQ--------------------VDEITTANIGKFHGG-SATNIVADEVI-LEAEARSHDPE 276 (396)
T ss_dssp CHHHHHHHHHHHSCCEE--------------------EETTEEEEEEEEEEC-SCTTBCCCEEE-EEEEEEESSHH
T ss_pred cHHHHHHHHHHhcccCC--------------------CCCCceeeeeEEecC-CCCcccCceEE-EEEEEEeCCHH
Confidence 99999999998876421 124688999999999 99999999999 99999997643
No 14
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.98 E-value=1.4e-32 Score=255.44 Aligned_cols=218 Identities=20% Similarity=0.178 Sum_probs=166.5
Q ss_pred CCHhHHHHHHHHHHHHHHcCCe-EEEcccc-cEEEEEeCCCCCCCEEEEcccCCCCCCC--------------CCC-CcH
Q 022852 1 MSPASVRAGNLIRQWMEDAGLR-TWVDHLG-NVHGRVEGLNASAQALLIGSHLDTVVDA--------------GIF-DGS 63 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~-v~~d~~g-nv~a~~~g~~~~~~~l~l~sH~DtV~~~--------------g~~-D~~ 63 (291)
.|++|.++++||+++|+++|++ ++++..+ |+++++++. +.|+|+|.+|+||||.+ +++ |||
T Consensus 28 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~--~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K 105 (369)
T 3tx8_A 28 PSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRG--LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMK 105 (369)
T ss_dssp BTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCC--CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTH
T ss_pred CCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCC--CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccch
Confidence 3788999999999999999873 4443334 699999764 35899999999999962 555 999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCcHHHHHHHCCCChh
Q 022852 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIA 143 (291)
Q Consensus 64 ~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~e~l~~~g~~~~ 143 (291)
++++++|++++.|++.+ .++++|.|+|+++||.+. ...|++.+.. .+. +
T Consensus 106 ~~~a~~l~a~~~l~~~~---~~~~~v~~~~~~~EE~g~---~~~G~~~~~~-----------------------~~~--~ 154 (369)
T 3tx8_A 106 SGLAVYLHTFATLATST---ELKHDLTLIAYECEEVAD---HLNGLGHIRD-----------------------EHP--E 154 (369)
T ss_dssp HHHHHHHHHHHHHTSCT---TCCSEEEEEEECCCSSCT---TSCHHHHHHH-----------------------HCG--G
T ss_pred HHHHHHHHHHHHHHhhc---CCCccEEEEEEeccccCc---ccccHHHHHH-----------------------hcc--c
Confidence 99999999999998643 688999999999999842 1126554421 110 0
Q ss_pred hHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 022852 144 EESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLL 223 (291)
Q Consensus 144 ~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~aHags~P~~~g~nAi~~aa~~i~~l 223 (291)
.++ ..++ +|.||+. ..++++++|..+++|+++|+++|| ++| +.|+|||.++++++.+|
T Consensus 155 -------~~~--~~~~---i~~ep~~--------~~i~~~~~G~~~~~i~v~G~~~Ha-~~p-~~g~nAi~~~a~~i~~l 212 (369)
T 3tx8_A 155 -------WLA--ADLA---LLGEPTG--------GWIEAGCQGNLRIKVTAHGVRAHS-ARS-WLGDNAMHKLSPIISKV 212 (369)
T ss_dssp -------GGC--CSEE---EECCCCT--------TCEEESBCEEEEEEEEEECBCCBT-TSG-GGSBCTGGGGHHHHHHH
T ss_pred -------ccC--CCEE---EEeCCCC--------CceeeecceEEEEEEEEeeecccc-CCC-CcCcCHHHHHHHHHHHH
Confidence 001 1223 6767642 346678999999999999999995 689 99999999999999999
Q ss_pred HHHhcCCCCCcccCCCCCccccccCCCCceEEEEEEeecCCCcccccCceeEEEeecceeeEEe
Q 022852 224 ERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLSLDDGYFLLYS 287 (291)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~~~~ 287 (291)
+++..+..+ .++....+++|+|.|++| .+.|+||++|+ +.+|+|+++..+
T Consensus 213 ~~~~~~~~~------------~~~~~~~~~~~vg~i~gG-~~~NvIP~~a~-~~~diR~~~~~~ 262 (369)
T 3tx8_A 213 AAYKAAEVN------------IDGLTYREGLNIVFCESG-VANNVIPDLAW-MNLNFRFAPNRD 262 (369)
T ss_dssp HHCCCCEEE------------ETTEEEECEEEEEEEEEC-SBTTBCCSEEE-EEEEEEECTTSC
T ss_pred Hhhcccccc------------cCCcccCceEEEEEEECC-CCCccccCcEE-EEEEEecCCCCC
Confidence 987543210 001112578999999998 89999999999 999999987653
No 15
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.98 E-value=1.2e-31 Score=249.08 Aligned_cols=221 Identities=19% Similarity=0.214 Sum_probs=162.3
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEE---cccccEEEEEeCCCCCCCEEEEcccCCCCCCC--------------------
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWV---DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~---d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~-------------------- 57 (291)
+|++|.++++||+++|+++|++++. +..+|++|++ |. +.|.|+|.+|||+||.+
T Consensus 18 ~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~-g~--~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~ 94 (377)
T 3isz_A 18 ISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKH-GT--SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLY 94 (377)
T ss_dssp BTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEE-ES--SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEE
T ss_pred CCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEe-CC--CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEE
Confidence 3778999999999999999999874 5568999998 53 35899999999999963
Q ss_pred -CCC-CcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCcHHHHH
Q 022852 58 -GIF-DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (291)
Q Consensus 58 -g~~-D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~e~l 135 (291)
+++ |||++++++|.+++.|++.+. +++++|.|+|+++||.++ ..|++.+.. .+
T Consensus 95 g~G~~D~k~g~~~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~~~----~~G~~~~~~-------------------~~ 149 (377)
T 3isz_A 95 GRGAADMKGSLAAMIVAAEEYVKANP--NHKGTIALLITSDEEATA----KDGTIHVVE-------------------TL 149 (377)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCSSSCC----SSSHHHHHH-------------------HH
T ss_pred eCChhhhhHHHHHHHHHHHHHHHhCC--CCCceEEEEEEcccccCc----cccHHHHHH-------------------HH
Confidence 233 999999999999999988776 788999999999999852 238776531 12
Q ss_pred HHCCCChhhHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecCCCCCCCCCCCCCCHHHH
Q 022852 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (291)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~aHags~P~~~g~nAi~~ 215 (291)
...+.. ++.+ +..++.... ..+ ..+..+++|..+++|+++|+++|| +.| +.|+||+.+
T Consensus 150 ~~~~~~------------~d~~-----~~~e~~~~~-~~g--~~i~~g~~g~~~~~i~~~G~~~Ha-~~p-~~g~nai~~ 207 (377)
T 3isz_A 150 MARDEK------------ITYC-----MVGEPSSAK-NLG--DVVKNGRRGSITGNLYIQGIQGHV-AYP-HLAENPIHK 207 (377)
T ss_dssp HHTTCC------------CCEE-----EECCCCBSS-STT--SEEEEEECEEEEEEEEEECC---------CGGGCHHHH
T ss_pred HhcCCC------------CCEE-----EEcCCCCcc-cCC--ceEEEEcceEEEEEEEEEcccccc-CCC-ccCcCHHHH
Confidence 222221 1211 222332110 011 125578999999999999999995 689 999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCceEEEEEEeecCCCcccccCceeEEEeecceeeEE
Q 022852 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLSLDDGYFLLY 286 (291)
Q Consensus 216 aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~~~ 286 (291)
+++++.+|+++..+... +...+++++++.|++|+.+.|+||++|+ +.+|+|+++..
T Consensus 208 ~~~~i~~l~~~~~~~~~--------------~~~~~~~~~v~~i~gg~~~~nvip~~~~-~~~diR~~~~~ 263 (377)
T 3isz_A 208 AALFLQELTTYQWDKGN--------------EFFPPTSLQIANIHAGTGSNNVIPAELY-IQFNLRYCTEV 263 (377)
T ss_dssp HHHHHHHHHHCCCCCCC--------------SSSCCCEEEEEEEEECCSCSSCCCSEEE-EEEEEEECTTS
T ss_pred HHHHHHHHHhccccccc--------------cccCCceeEEEEEECCCCCCcccCCceE-EEEEEecCCCC
Confidence 99999999886432110 2246789999999999448999999999 99999998754
No 16
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.98 E-value=2.2e-31 Score=249.58 Aligned_cols=206 Identities=25% Similarity=0.356 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHHHcCCeEEEcc-----cc-cEEEEEeCCCCCCCEEEEcccCCCCCCC------------------CCC
Q 022852 5 SVRAGNLIRQWMEDAGLRTWVDH-----LG-NVHGRVEGLNASAQALLIGSHLDTVVDA------------------GIF 60 (291)
Q Consensus 5 E~~~~~~i~~~l~~~G~~v~~d~-----~g-nv~a~~~g~~~~~~~l~l~sH~DtV~~~------------------g~~ 60 (291)
+.++++||+++|+++|++++.+. .+ |++++++|.. .|+|+|.+|+||||.. |..
T Consensus 41 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~--~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~ 118 (393)
T 1cg2_A 41 IAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRG--GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIA 118 (393)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSS--CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTT
T ss_pred HHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCC--CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcc
Confidence 47899999999999999987654 34 7999998643 3789999999999863 346
Q ss_pred CcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCcHHHHHHHCCC
Q 022852 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (291)
Q Consensus 61 D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~e~l~~~g~ 140 (291)
|||++++++|++++.|++.+. +++++|.|+|+++||.+. .|++.+.. +...+
T Consensus 119 D~k~~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g~-----~G~~~~~~------------------~~~~~--- 170 (393)
T 1cg2_A 119 DDKGGNAVILHTLKLLKEYGV--RDYGTITVLFNTDEEKGS-----FGSRDLIQ------------------EEAKL--- 170 (393)
T ss_dssp TTHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCGGGTT-----TTTHHHHH------------------HHHHH---
T ss_pred cchHHHHHHHHHHHHHHhcCC--CCCCCEEEEEEcccccCC-----ccHHHHHH------------------HHhhc---
Confidence 999999999999999999886 677899999999999742 37775431 00000
Q ss_pred ChhhHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHH
Q 022852 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (291)
Q Consensus 141 ~~~~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~aHags~P~~~g~nAi~~aa~~i 220 (291)
++.+ +..||+.. ....++.+++|..+++|+++|+++|||+.| +.|+|||.++++++
T Consensus 171 -------------~d~~-----i~~e~~~~-----~~~~i~~~~~G~~~~~i~v~G~~~Hag~~p-~~g~nAi~~~~~~i 226 (393)
T 1cg2_A 171 -------------ADYV-----LSFEPTSA-----GDEKLSLGTSGIAYVQVNITGKASHAGAAP-ELGVNALVEASDLV 226 (393)
T ss_dssp -------------CSEE-----EECCCEET-----TSCEEESEECEEEEEEEEEECBCEETTSCG-GGSBCHHHHHHHHH
T ss_pred -------------CCEE-----EEeCCCCC-----CCCcEEEeeeeeEEEEEEEEeeecccCCCc-ccCcCHHHHHHHHH
Confidence 1111 22344310 112466789999999999999999977789 89999999999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCccccccCCCCceEEEEEEeecCCCcccccCceeEEEeecceeeE
Q 022852 221 VLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLSLDDGYFLL 285 (291)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~~ 285 (291)
.+|+.+... ...+++++|.|++| .+.|+||++|+ +.+|+|+++.
T Consensus 227 ~~l~~~~~~-------------------~~~~~~~v~~i~gG-~~~NvIP~~a~-~~~~iR~~~~ 270 (393)
T 1cg2_A 227 LRTMNIDDK-------------------AKNLRFNWTIAKAG-NVSNIIPASAT-LNADVRYARN 270 (393)
T ss_dssp HHHGGGCBT-------------------TTTEEEEEEEEEEC-SSTTEECSEEE-EEEEEEESSH
T ss_pred HHHHhhhCc-------------------ccCceEEEEEEeCC-CCCCEECcccE-EEEEEeeCCh
Confidence 999876532 24689999999999 89999999999 9999999874
No 17
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.97 E-value=4.3e-32 Score=257.75 Aligned_cols=206 Identities=20% Similarity=0.178 Sum_probs=161.5
Q ss_pred CHhHHHHHHHHHHHHHHcCCe-EEEcccccEEEEEeCCCC-CCCEEEEcccCCCCCCC--------------C-------
Q 022852 2 SPASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNA-SAQALLIGSHLDTVVDA--------------G------- 58 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~-v~~d~~gnv~a~~~g~~~-~~~~l~l~sH~DtV~~~--------------g------- 58 (291)
|.+|.++++||+++|+++|++ +++|..+||+++++|..+ +.|+|+|.||+||||.. |
T Consensus 53 ~~~e~~~~~~l~~~l~~~G~~~~~~d~~~nv~a~~~g~~~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~ 132 (434)
T 3ife_A 53 TPGQIEFGKLLVEELKEVGLTEVTMDDNGYVMATLPANTDKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNE 132 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEEEECTTSCEEEEECCBSSSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEET
T ss_pred CHHHHHHHHHHHHHHHHcCCceEEECCCcEEEEEeCCCCCCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceeccc
Confidence 458999999999999999997 999999999999987643 46899999999999851 1
Q ss_pred -------------------------------CCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcc
Q 022852 59 -------------------------------IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFL 107 (291)
Q Consensus 59 -------------------------------~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~ 107 (291)
+.|||++++++|++++.|++.+. .++++|.|+|++|||++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L~~~~~--~~~~~i~~if~~~EE~g~------ 204 (434)
T 3ife_A 133 ELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQ--IKHGKIRVAFTPDEEIGR------ 204 (434)
T ss_dssp TTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHTCTT--SCBCCEEEEEESCGGGTC------
T ss_pred ccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHHHhCCC--CCCCCEEEEEECCcccCh------
Confidence 37899999999999999999876 789999999999999853
Q ss_pred cchhhhccCcchhhhccCCCCCcHHHHHHHCCCChhhHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCc
Q 022852 108 GSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQ 187 (291)
Q Consensus 108 Gs~~~~~~~~~~~~~~~d~~g~~~~e~l~~~g~~~~~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~ 187 (291)
|++.+. .+.+ .++.+.+ +| +++ ...++++++|.
T Consensus 205 Ga~~~~------------------~~~~-----------------~~d~~~~---~d--~~~-------~g~i~~~~~G~ 237 (434)
T 3ife_A 205 GPAHFD------------------VEAF-----------------GASFAYM---MD--GGP-------LGGLEYESFNA 237 (434)
T ss_dssp TGGGCC------------------HHHH-----------------CCSEEEE---CC--CCS-------TTEEECCBCEE
T ss_pred HHHHhh------------------hhhc-----------------CCCEEEE---ec--CCC-------CCceeecCCCe
Confidence 776531 1111 1122211 33 321 12366789999
Q ss_pred EEEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCceEEEEEEeecCCCcc
Q 022852 188 TRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASN 267 (291)
Q Consensus 188 ~~~~i~v~Gk~aHags~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~N 267 (291)
.+++|+++|+++|||+.| +.|+|||.++++++.+|+++.. | ..++.++|.|++| ..|
T Consensus 238 ~~~~i~v~G~~~Hag~~P-~~g~nAi~~aa~~i~~l~~~~~------------------~--~~~~~~~g~i~~g--~~n 294 (434)
T 3ife_A 238 AGAKLTFNGTNTHPGTAK-NKMRNATKLAMEFNGHLPVEEA------------------P--EYTEGYEGFYHLL--SLN 294 (434)
T ss_dssp EEEEEEEECBCCCGGGCT-TTCBCHHHHHHHHHHTSCTTCS------------------G--GGCCTTCCEEEEE--EEE
T ss_pred EEEEEEEEEEecCCCCCc-ccchhHHHHHHHHHHhcccccC------------------C--CcceeeeEEEEee--eEe
Confidence 999999999999987789 8999999999999998876521 1 1233345677766 489
Q ss_pred cccCceeEEEeecceeeEE
Q 022852 268 VIPGEARNLSLDDGYFLLY 286 (291)
Q Consensus 268 vIP~~a~~~~~D~r~~~~~ 286 (291)
+||++|+ +.+|+|+++..
T Consensus 295 ~iP~~a~-~~~diR~~~~~ 312 (434)
T 3ife_A 295 GDVEQSK-AYYIIRDFDRK 312 (434)
T ss_dssp ECSSEEE-EEEEEEESSHH
T ss_pred EecCeEE-EEEEEecCCHH
Confidence 9999999 99999998743
No 18
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.96 E-value=1.5e-28 Score=236.23 Aligned_cols=232 Identities=15% Similarity=0.088 Sum_probs=163.4
Q ss_pred HHHHHHHHHHHHHHcCCeEEEcc---cccEEEEEeCCCCCCCEEEEcccCCCCCCC----------------------CC
Q 022852 5 SVRAGNLIRQWMEDAGLRTWVDH---LGNVHGRVEGLNASAQALLIGSHLDTVVDA----------------------GI 59 (291)
Q Consensus 5 E~~~~~~i~~~l~~~G~~v~~d~---~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~----------------------g~ 59 (291)
|.++++||+++|+++|++++++. .+||+++++|.+++.|+|+|.||+||||.+ |.
T Consensus 66 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~ 145 (481)
T 2pok_A 66 LKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGV 145 (481)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTT
T ss_pred HHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEcccc
Confidence 49999999999999999988754 578999998653346899999999999864 34
Q ss_pred CCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCcHHHHHHHCC
Q 022852 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS 139 (291)
Q Consensus 60 ~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~e~l~~~g 139 (291)
.|||++++++|++++.|++.+. .++++|.|+|+++||.+ +.|++.+.. +. .+
T Consensus 146 ~D~k~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g-----~~g~~~~~~------------------~~-~~-- 197 (481)
T 2pok_A 146 DDDKGHITARLSALRKYMQHHD--DLPVNISFIMEGAEESA-----STDLDKYLE------------------KH-AD-- 197 (481)
T ss_dssp TTTHHHHHHHHHHHHHHHHTCS--SCSSEEEEEEESCGGGT-----TTTHHHHHH------------------HH-HH--
T ss_pred ccCcHHHHHHHHHHHHHHHhcC--CCCCCEEEEEecccccC-----chhHHHHHH------------------Hh-Hh--
Confidence 7999999999999999998855 68899999999999973 236654421 10 00
Q ss_pred CChhhHHhhhhcCC-CCceeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecC--CCCCCCCCCCCCCHHHHH
Q 022852 140 IDIAEESLLQLKYD-PASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQ--GHAGTVPMSMRQDPMTAA 216 (291)
Q Consensus 140 ~~~~~~~~~~~~~~-~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~--aHags~P~~~g~nAi~~a 216 (291)
. ++ ++. + +..+++... .....++++++|..+++|+++|++ +|| +.| +.|.|||.++
T Consensus 198 ------~-----~~~~d~--~---i~~~~~~~~---~~~~~i~~~~~G~~~~~i~v~G~~g~~Hs-s~p-~~g~nAi~~~ 256 (481)
T 2pok_A 198 ------K-----LRGADL--L---VWEQGTKNA---LEQLEISGGNKGIVTFDAKVKSADVDIHS-SYG-GVVESAPWYL 256 (481)
T ss_dssp ------H-----HTTCSE--E---ECSCCBBCT---TSCEEEECCBCEEEEEEEEEECSSSCEEG-GGT-TTBCCHHHHH
T ss_pred ------h-----ccCCCE--E---EECCCCccC---CCCeeEEEecceeEEEEEEEecCCCCccc-cCC-CCCCCHHHHH
Confidence 0 00 111 1 222332110 112356678999999999999999 896 899 8999999999
Q ss_pred HHHHHHHHHHhcCCCCCc-----------------c-c---CCC--------CC----cccccc---CCCCceEEEEEEe
Q 022852 217 AELIVLLERLCKHPKDFL-----------------S-Y---DGR--------SN----CSTLES---LSSSLVCTVGEIS 260 (291)
Q Consensus 217 a~~i~~l~~~~~~~~~~~-----------------~-~---~~~--------~~----~~~~~~---~~~~~~~~vg~i~ 260 (291)
++++.+|+.+..+ ..+. + . +.. .. .....+ ....+++|+|.|+
T Consensus 257 a~~i~~l~~~~~~-i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~ 335 (481)
T 2pok_A 257 LQALQSLRAADGR-ILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQ 335 (481)
T ss_dssp HHHHHHTBCTTSC-BCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEE
T ss_pred HHHHHHhhCCCCc-eeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeee
Confidence 9999988764310 0000 0 0 000 00 000000 0135799999999
Q ss_pred ecC---CCcccccCceeEEEeecceeeEEe
Q 022852 261 SWP---SASNVIPGEARNLSLDDGYFLLYS 287 (291)
Q Consensus 261 ~G~---~~~NvIP~~a~~~~~D~r~~~~~~ 287 (291)
+|. .+.|+||++|+ +.+|+|+++..+
T Consensus 336 gG~~~~~~~NvIP~~a~-~~~diR~~~~~~ 364 (481)
T 2pok_A 336 SGYQGQGVKTILPAEAS-AKLEVRLVPGLE 364 (481)
T ss_dssp EECCSSSCCCEECSEEE-EEEEEEECTTCC
T ss_pred cCCCCCCCCeeccCeeE-EEEEEEeCCCCC
Confidence 982 27899999999 999999987543
No 19
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.96 E-value=3.7e-29 Score=232.63 Aligned_cols=201 Identities=18% Similarity=0.128 Sum_probs=149.8
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEccc----ccEEEEEeCCCCCCCEEEEcccCCCCCCC--------------------CC
Q 022852 4 ASVRAGNLIRQWMEDAGLRTWVDHL----GNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GI 59 (291)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~v~~d~~----gnv~a~~~g~~~~~~~l~l~sH~DtV~~~--------------------g~ 59 (291)
+|.++++||+++|+ |++++.+.. +|+++ ++|. |+|+|.+|+||||.+ |.
T Consensus 32 ~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~----~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~ 104 (369)
T 2f7v_A 32 AEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT----PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGV 104 (369)
T ss_dssp SSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC----CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTT
T ss_pred cHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC----CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEeccc
Confidence 89999999999999 999887654 68999 9763 679999999999875 34
Q ss_pred CCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCcHHHHHHHCC
Q 022852 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS 139 (291)
Q Consensus 60 ~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~e~l~~~g 139 (291)
.|||+|++++|++++. ++++|+|+|+++||.+ ++.|++.+... +
T Consensus 105 ~D~k~g~a~~l~a~~~---------~~~~v~~~~~~~EE~~----g~~G~~~~~~~-----------------------~ 148 (369)
T 2f7v_A 105 CDIKGAAAALVAAANA---------GDGDAAFLFSSDEEAN----DPRCIAAFLAR-----------------------G 148 (369)
T ss_dssp TTTHHHHHHHHHHHTT---------CCCCEEEEEESCTTSS----SCCHHHHHHTT-----------------------C
T ss_pred ccccHHHHHHHHHHhc---------CCCCEEEEEEeCcccC----CCcCHHHHHhc-----------------------C
Confidence 5899999999988854 3578999999999972 23488765421 1
Q ss_pred CChhhHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecCCCCCCCCCC-CCCCHHHHHHH
Q 022852 140 IDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMS-MRQDPMTAAAE 218 (291)
Q Consensus 140 ~~~~~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~aHags~P~~-~g~nAi~~aa~ 218 (291)
.. ++. + +..||+ ...++.+++|..+++|+++|+++|| ++| + .|+|||.++++
T Consensus 149 ~~------------~d~--~---i~~e~~--------~~~i~~~~~g~~~~~i~v~G~~~Ha-~~p-~~~g~nAi~~~~~ 201 (369)
T 2f7v_A 149 LP------------YDA--V---LVAEPT--------MSEAVLAHRGISSVLMRFAGRAGHA-SGK-QDPAASALHQAMR 201 (369)
T ss_dssp CC------------CSE--E---EECCCS--------TTCBBCCBCCEEEEEEEEECCCC--------CTTSCHHHHHHH
T ss_pred CC------------CCE--E---EECCCC--------CCcceeecCceEEEEEEEeeeCccc-CCC-CcCCCCHHHHHHH
Confidence 11 111 1 223443 1235567999999999999999995 699 7 99999999999
Q ss_pred HHHHHHHHhcCCCCCcccCCCCCccccccCCCCceEEEEEEeecCCCcccccCceeEEEeecceeeEEe
Q 022852 219 LIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLSLDDGYFLLYS 287 (291)
Q Consensus 219 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~~D~r~~~~~~ 287 (291)
++.+|+.+..+..+ ...++..+ +++++|.|++| .+.|+||++|+ +.+|+|+++..+
T Consensus 202 ~i~~l~~~~~~~~~----------~~~~~~~~-~~~~vg~i~gG-~~~NviP~~a~-~~~diR~~~~~~ 257 (369)
T 2f7v_A 202 WGGKALDHVESLAH----------ARFGGLTG-LRFNIGRVDGG-IKANMIAPAAE-LRFGFRPLPSMD 257 (369)
T ss_dssp HHHHHHHHHHHTTT----------CEETTEES-CEEEEEEEEEC-SSTTSCCSEEE-EEEEEECCTTCC
T ss_pred HHHHHHhhhhhhcc----------cccCcccC-CceEEEEeecC-CCCCcCCCceE-EEEEEeeCCCCC
Confidence 99999987643210 00011122 79999999999 89999999999 999999987543
No 20
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.96 E-value=1.9e-28 Score=231.31 Aligned_cols=203 Identities=18% Similarity=0.194 Sum_probs=157.9
Q ss_pred HhHHHHHHHHHHHHHHcCCe-EEEcccccEEEEEeCCCC-CCCEEEEcccCCCCCCC--------------C--------
Q 022852 3 PASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNA-SAQALLIGSHLDTVVDA--------------G-------- 58 (291)
Q Consensus 3 ~~E~~~~~~i~~~l~~~G~~-v~~d~~gnv~a~~~g~~~-~~~~l~l~sH~DtV~~~--------------g-------- 58 (291)
.+|.++++||+++|+++|++ ++++..+||+++++|..+ ..|+|+|.+||||||.+ |
T Consensus 29 ~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~g~~~~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g 108 (417)
T 1fno_A 29 EGQWKLLRLLKQQLEEMGLVNITLSEKGTLMATLPANVEGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIG 108 (417)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEECTTCCEEEEECCSSCSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSS
T ss_pred ccHHHHHHHHHHHHHHcCCCeEEECCCceEEEEECCCCCCCCCceEEEEeccccCCCCCCCCCceEEecCCCCeeccccc
Confidence 48999999999999999998 888888999999987532 35889999999999753 2
Q ss_pred ------------------------C-----CCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccc
Q 022852 59 ------------------------I-----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGS 109 (291)
Q Consensus 59 ------------------------~-----~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs 109 (291)
+ +|||++++++|++++.|++.+ .++++|+|+|+++||.++ |+
T Consensus 109 ~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~~---~~~~~v~~~~~~~EE~g~------Ga 179 (417)
T 1fno_A 109 DEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNP---IPHGDIKVAFTPDEEVGK------GA 179 (417)
T ss_dssp SCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSSS---CCCCCEEEEEESCGGGTC------TT
T ss_pred ccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhCC---CCCCcEEEEEEeccccCC------Ch
Confidence 1 889999999999999999875 367999999999999742 77
Q ss_pred hhhhccCcchhhhccCCCCCcHHHHHHHCCCChhhHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCcEE
Q 022852 110 AALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTR 189 (291)
Q Consensus 110 ~~~~~~~~~~~~~~~d~~g~~~~e~l~~~g~~~~~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~ 189 (291)
+.+. .+.+ .++ .+ +++++++. ..++.+++|..+
T Consensus 180 ~~~~------------------~~~~-----------------~~d--~~---i~~d~~~~-------g~i~~~~~g~~~ 212 (417)
T 1fno_A 180 KHFD------------------VEAF-----------------GAQ--WA---YTVDGGGV-------GELEFENFNAAS 212 (417)
T ss_dssp TTCC------------------HHHH-----------------CCS--EE---EECCCCST-------TBEECCBCEEEE
T ss_pred hhhc------------------hhhc-----------------CCC--EE---EEeCCCCc-------CeeEEecCCcee
Confidence 6431 1100 111 12 44444321 125567999999
Q ss_pred EEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCceEEEEEEeecCCCcccc
Q 022852 190 LKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVI 269 (291)
Q Consensus 190 ~~i~v~Gk~aHags~P~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvI 269 (291)
++|+++|+++||++.| +.|+|||.++++++.+|+.+..+.. +....++++++.|++|
T Consensus 213 ~~i~~~G~~~Hs~~~p-~~g~nAi~~~a~~i~~l~~~~~~~~---------------~~~~~~~~~v~~i~gG------- 269 (417)
T 1fno_A 213 VNIKIVGNNVHPGTAK-GVMVNALSLAARIHAEVPADEAPET---------------TEGYEGFYHLASMKGT------- 269 (417)
T ss_dssp EEEEEECBCCCGGGCT-TTCBCHHHHHHHHHHTSCTTSSGGG---------------CCTTCCEEEEEEEEEC-------
T ss_pred EEEEEEeeccCCCCCc-cccCCHHHHHHHHHHhhhccCCccc---------------ccccccEEEEEEEeec-------
Confidence 9999999999975579 8999999999999998876543210 1134578999999987
Q ss_pred cCceeEEEeecceeeE
Q 022852 270 PGEARNLSLDDGYFLL 285 (291)
Q Consensus 270 P~~a~~~~~D~r~~~~ 285 (291)
|++|+ +.+|+|+++.
T Consensus 270 p~~a~-~~~d~R~~~~ 284 (417)
T 1fno_A 270 VDRAE-MHYIIRDFDR 284 (417)
T ss_dssp SSEEE-EEEEEEESSH
T ss_pred cCeEE-EEEEEeCCCH
Confidence 89999 9999999873
No 21
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.96 E-value=1.8e-28 Score=235.29 Aligned_cols=232 Identities=16% Similarity=0.062 Sum_probs=165.4
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEccc--------------ccEEEEEeCCCCCCCEEEEcccCCCCCCC------------
Q 022852 4 ASVRAGNLIRQWMEDAGLRTWVDHL--------------GNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (291)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~v~~d~~--------------gnv~a~~~g~~~~~~~l~l~sH~DtV~~~------------ 57 (291)
+|.++++||+++|+++|++++++.. +||++++++. +..|+|+|.+|+||||.+
T Consensus 44 ~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~-~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~ 122 (479)
T 2zog_A 44 EIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSD-PQKKTVCIYGHLDVQPAALEDGWDSEPFTL 122 (479)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEEEECCC-TTSCEEEEEEECCBCCCCGGGTCSSCTTSC
T ss_pred HHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEEEecCC-CCCCeEEEEEecCCCCCCccccCcCCCCcc
Confidence 5689999999999999999887653 7899999653 346899999999999873
Q ss_pred ----------CCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCC
Q 022852 58 ----------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKS 127 (291)
Q Consensus 58 ----------g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~ 127 (291)
|.+|||++++++|++++.|++.+. +++++|.|+|+++||.+ +.|++.+.....
T Consensus 123 ~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g-----~~Ga~~~~~~~~---------- 185 (479)
T 2zog_A 123 VEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQ--EIPVNLRFCLEGMEESG-----SEGLDELIFAQK---------- 185 (479)
T ss_dssp EEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCGGGT-----CTTHHHHHHHTT----------
T ss_pred eeECCEEEeeccccChHHHHHHHHHHHHHHHhCC--CCCCcEEEEEecccccC-----CccHHHHHHhhh----------
Confidence 348999999999999999999887 78899999999999973 247776532110
Q ss_pred CCcHHHHHHHCCCChhhHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecC--CCCCCCC
Q 022852 128 GVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQ--GHAGTVP 205 (291)
Q Consensus 128 g~~~~e~l~~~g~~~~~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~--aHags~P 205 (291)
.++.. +++. + +..|++.. +. ....++++++|..+++|+++|++ +|| +.|
T Consensus 186 ----------~~~~~----------~~d~--~---i~~e~~~~-~~--~~~~i~~~~~G~~~~~i~v~G~~~~~Hs-~~~ 236 (479)
T 2zog_A 186 ----------DKFFK----------DVDY--V---CISDNYWL-GK--NKPCITYGLRGICYFFIEVECSDKDLHS-GVY 236 (479)
T ss_dssp ----------TTTTT----------TCCE--E---EECCCBCS-SS--SSCEEEEEECEEEEEEEEEECCSSCEEH-HHH
T ss_pred ----------hhhcc----------cCCE--E---EEeCCCcC-CC--CCeEEEEecceEEEEEEEEEeCCCCCcc-CCC
Confidence 00100 0111 1 22344321 11 23457788999999999999999 996 444
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCc--------------ccccc------C-------------C---
Q 022852 206 MSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNC--------------STLES------L-------------S--- 249 (291)
Q Consensus 206 ~~~g~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~--------------~~~~~------~-------------~--- 249 (291)
|.||+.++++++..|+++..+.... ....-+.. ..+.+ + .
T Consensus 237 ---g~~ai~~~~~~i~~l~~l~~~~g~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 312 (479)
T 2zog_A 237 ---GGSVHEAMTDLISLMGCLVDKKGKI-LIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHR 312 (479)
T ss_dssp ---TTTSCCHHHHHHHHHTTSBCTTSCB-CSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHH
T ss_pred ---CCCccCHHHHHHHHHHhcCCCCCCE-ecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHh
Confidence 7999999999999998765431000 00000000 00000 0 0
Q ss_pred -CCceEEEEEEeec---CCCcccccCceeEEEeecceeeEEe
Q 022852 250 -SSLVCTVGEISSW---PSASNVIPGEARNLSLDDGYFLLYS 287 (291)
Q Consensus 250 -~~~~~~vg~i~~G---~~~~NvIP~~a~~~~~D~r~~~~~~ 287 (291)
..++++++.|++| +.+.|+||++|+ +.+|+|+++..+
T Consensus 313 ~~~~~~~v~~i~gg~~g~~~~NvIP~~a~-~~~~~R~~~~~~ 353 (479)
T 2zog_A 313 WRYPSLSLHGIEGAFSGSGAKTVIPRKVV-GKFSIRLVPDMI 353 (479)
T ss_dssp HTSCEEEEEEEESSCCSSSCCCEECSEEE-EEEEEEECTTCC
T ss_pred hcCCCeEEeeeecCCcCCCCccccCCceE-EEEEEEeCCCCC
Confidence 2578999999987 468999999999 999999987544
No 22
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.95 E-value=4.2e-27 Score=226.42 Aligned_cols=232 Identities=16% Similarity=0.127 Sum_probs=159.2
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEccc--------------ccEEEEEeCCCCCCCEEEEcccCCCCCCC------------
Q 022852 4 ASVRAGNLIRQWMEDAGLRTWVDHL--------------GNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (291)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~v~~d~~--------------gnv~a~~~g~~~~~~~l~l~sH~DtV~~~------------ 57 (291)
+|.++++||+++|+++|++++.+.. .||+|++++. +..++|+|.+||||||.+
T Consensus 51 ~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~~v~a~~~~~-~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~ 129 (485)
T 3dlj_A 51 ELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGSD-PTKGTVCFYGHLDVQPADRGDGWLTDPYVL 129 (485)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEECCCEEEEEECCC-TTSCEEEEEEECCBCCCCGGGTCSSCTTSC
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCCCcEEEEEECCC-CCCCEEEEEeeecCCCCCCcccCCCCCCcc
Confidence 3789999999999999999876542 2699999653 346899999999999863
Q ss_pred ----------CCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCC
Q 022852 58 ----------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKS 127 (291)
Q Consensus 58 ----------g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~ 127 (291)
|..|||++++++|+++++|++.+. +++++|.|+|+++||.+. .|++.+...
T Consensus 130 ~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g~-----~g~~~~~~~------------ 190 (485)
T 3dlj_A 130 TEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQ--DLPVNIKFIIEGMEEAGS-----VALEELVEK------------ 190 (485)
T ss_dssp EEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCGGGTT-----TTHHHHHHH------------
T ss_pred EEECCEEEecccccCcHHHHHHHHHHHHHHHhCC--CCCccEEEEEEcccccCC-----ccHHHHHHh------------
Confidence 345999999999999999999887 789999999999999742 377654311
Q ss_pred CCcHHHHHHHCCCChhhHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCcEEEEEEEEecCC--CCCCCC
Q 022852 128 GVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQG--HAGTVP 205 (291)
Q Consensus 128 g~~~~e~l~~~g~~~~~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~i~v~Gk~a--Hags~P 205 (291)
. ..++. +.+.+.+.+| ++.. + .....+..+++|..+++|+|+|+++ ||| .
T Consensus 191 ------~--~~~~~-------------~~~d~~~~~~--~~~~-~--~~~~~~~~g~~g~~~~~i~v~G~~~~~H~~-~- 242 (485)
T 3dlj_A 191 ------E--KDRFF-------------SGVDYIVISD--NLWI-S--QRKPAITYGTRGNSYFMVEVKCRDQDFHSG-T- 242 (485)
T ss_dssp ------H--TTTTS-------------TTCCEEEECC--CBCC-C----CCEEEEEECEEEEEEEEEESCSSCEETT-T-
T ss_pred ------h--hhhcc-------------cCCCEEEEcC--CCcc-C--CCCeeEEEeccceEEEEEEEEECCCCCcCC-C-
Confidence 0 00000 0111222233 2110 0 1123466789999999999999999 964 3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCCCc--ccCCCCCc-c-----cc--ccCC--------------------------
Q 022852 206 MSMRQDPMTAAAELIVLLERLCKHPKDFL--SYDGRSNC-S-----TL--ESLS-------------------------- 249 (291)
Q Consensus 206 ~~~g~nAi~~aa~~i~~l~~~~~~~~~~~--~~~~~~~~-~-----~~--~~~~-------------------------- 249 (291)
.|.||+.+++.++..|+.+..+...++ ...+.... . .+ .|+.
T Consensus 243 --~g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 320 (485)
T 3dlj_A 243 --FGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLW 320 (485)
T ss_dssp --STTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHH
T ss_pred --CCccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHh
Confidence 467888888888888877755421000 00000000 0 00 0000
Q ss_pred CCceEEEEEEeec---CCCcccccCceeEEEeecceeeEE
Q 022852 250 SSLVCTVGEISSW---PSASNVIPGEARNLSLDDGYFLLY 286 (291)
Q Consensus 250 ~~~~~~vg~i~~G---~~~~NvIP~~a~~~~~D~r~~~~~ 286 (291)
..+++||+.|++| |++.||||++|+ +.+|+|+++..
T Consensus 321 ~~~~~~v~~i~gG~~gp~a~NVIP~~a~-~~~diR~~~~~ 359 (485)
T 3dlj_A 321 RYPSLSIHGIEGAFDEPGTKTVIPGRVI-GKFSIRLVPHM 359 (485)
T ss_dssp TSCEEEEEEEESSCCSSSCCCEECSEEE-EEEEEEECTTC
T ss_pred cCCceEEEEEecCCcCCCCCceeCCeeE-EEEEEEcCCCC
Confidence 2688999999987 368999999999 99999998754
No 23
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.95 E-value=2.5e-27 Score=228.43 Aligned_cols=204 Identities=19% Similarity=0.203 Sum_probs=152.1
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCC--CCCCEEEEcccCCCCCCC---------------------
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDA--------------------- 57 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~--~~~~~l~l~sH~DtV~~~--------------------- 57 (291)
.|++|.++++||+++|+++|++++.+..+|++++++|+. .+.|.|+|.+|+|+||.+
T Consensus 29 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~ 108 (490)
T 3mru_A 29 PSKHEEALAQYIVTWATEQGFDVRRDPTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEW 108 (490)
T ss_dssp BTTCCTTHHHHHHHHHHHTTCEEEECTTCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTE
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEEcCCCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCe
Confidence 377899999999999999999999998999999998652 246899999999999864
Q ss_pred ---CCC----CcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCc
Q 022852 58 ---GIF----DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130 (291)
Q Consensus 58 ---g~~----D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~ 130 (291)
+++ |||+|++++|+++ ++.. .++++|.|+|++|||.+ +.|++.+....
T Consensus 109 l~g~G~~lgaD~k~g~a~~l~~l---~~~~---~~~~~v~~~~~~~EE~g-----~~Ga~~~~~~~-------------- 163 (490)
T 3mru_A 109 VTAKGTTLGADNGIGMASCLAVL---ASKE---IKHGPIEVLLTIDEEAG-----MTGAFGLEAGW-------------- 163 (490)
T ss_dssp EEETTBCCCHHHHTTHHHHHHHH---HCSS---CCCCSEEEEEESCSSST-----TGGGGTCCSSS--------------
T ss_pred EecCCCccCCCCHHHHHHHHHHH---HhCC---CCCCCEEEEEEcccccc-----cHhHHHhhhcc--------------
Confidence 234 9999999888765 3333 46899999999999984 35888664210
Q ss_pred HHHHHHHCCCChhhHHhhhhcCCCCceeeEEEeeeccCcc--c-------cccC--cccceEEcccCcEEEEEEEEe-cC
Q 022852 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPV--L-------EWVG--FPLGVVQGIAGQTRLKVTVRG-SQ 198 (291)
Q Consensus 131 ~~e~l~~~g~~~~~~~~~~~~~~~~~i~a~~elh~e~g~~--~-------~~~~--~~~gi~~~~~G~~~~~i~v~G-k~ 198 (291)
+.+ + ++ ++.++.+. + ++.. .......+++|..+++|+++| ++
T Consensus 164 ---------~~~------------~--~~---~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~ 217 (490)
T 3mru_A 164 ---------LKG------------D--IL---LNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKG 217 (490)
T ss_dssp ---------CCS------------S--EE---EECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCC
T ss_pred ---------cCC------------C--EE---EEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCC
Confidence 000 0 00 11111100 0 0000 001112457899999999999 99
Q ss_pred CCCCCCCCCCCC-CHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCceEEEEEEeecCCCcccccCceeEEE
Q 022852 199 GHAGTVPMSMRQ-DPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLS 277 (291)
Q Consensus 199 aHags~P~~~g~-nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~ 277 (291)
+||+..| +.|+ |||..+++++..|++ . .+++++.|+|| .+.|+||++|+ +.
T Consensus 218 gHs~~~p-~~g~~nai~~~~~~l~~l~~---~----------------------~~~~v~~i~gG-~~~NvIP~~a~-~~ 269 (490)
T 3mru_A 218 GHSGCDI-HTGRGNANKLIGRFLAGHAQ---E----------------------LDLRLVEFRGG-SLRNAIPREAF-VT 269 (490)
T ss_dssp EETTTSS-SSCCCCHHHHHHHHHHHHTT---T----------------------TTCEEEEEEEC-SCTTEECCCEE-EE
T ss_pred ccccccc-ccCCcCHHHHHHHHHHHHHh---c----------------------CcEEEEEEECC-CCCcccCCccE-EE
Confidence 9975568 9999 999999999988764 1 23689999999 89999999999 99
Q ss_pred eeccee
Q 022852 278 LDDGYF 283 (291)
Q Consensus 278 ~D~r~~ 283 (291)
+++|..
T Consensus 270 ~~iR~~ 275 (490)
T 3mru_A 270 VALPAE 275 (490)
T ss_dssp EEEEGG
T ss_pred EEECcc
Confidence 999964
No 24
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.95 E-value=1.2e-26 Score=223.22 Aligned_cols=202 Identities=20% Similarity=0.241 Sum_probs=150.0
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCC--CCCCEEEEcccCCCCCCCC---------------------
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDAG--------------------- 58 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~--~~~~~l~l~sH~DtV~~~g--------------------- 58 (291)
|++|.++++||+++|+++|++++.+..+|++++++|.. +..|+|+|.+|+|+||.++
T Consensus 27 s~~e~~~~~~l~~~l~~~G~~~~~~~~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l 106 (487)
T 2qyv_A 27 SYKEEQLAQFIINWAKTKGFFAERDEVGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWV 106 (487)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEECTTCCEEEEECCCTTCTTBCCEEEEEESCBCCC----------CCCCCEEECSSEE
T ss_pred CCcHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEE
Confidence 67899999999999999999999888899999998642 2458999999999998742
Q ss_pred ---CC----CcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCcH
Q 022852 59 ---IF----DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTV 131 (291)
Q Consensus 59 ---~~----D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~ 131 (291)
++ |||+|++++|++++ +.+ .++++|.|+|+++||.+ +.|++.+...
T Consensus 107 ~g~G~~lgaD~k~g~a~~l~a~~---~~~---~~~~~v~~~~~~~EE~g-----~~Ga~~~~~~---------------- 159 (487)
T 2qyv_A 107 KAKGTTLGADNGIGMASALAVLE---SND---IAHPELEVLLTMTEERG-----MEGAIGLRPN---------------- 159 (487)
T ss_dssp EETTBCCCHHHHHHHHHHHHHHH---CSS---SCCSSEEEEEESCTTTT-----CHHHHTCCSS----------------
T ss_pred EeCCCCcCCcCHHHHHHHHHHHH---hCC---CCCCCEEEEEEeccccC-----CHHHHHHHHh----------------
Confidence 34 99999999998885 233 46789999999999973 3488866431
Q ss_pred HHHHHHCCCChhhHHhhhhcCCCCceeeEEEeeeccCcc--c--cc-------cCcccceEEcccCcEEEEEEEEe-cCC
Q 022852 132 LDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPV--L--EW-------VGFPLGVVQGIAGQTRLKVTVRG-SQG 199 (291)
Q Consensus 132 ~e~l~~~g~~~~~~~~~~~~~~~~~i~a~~elh~e~g~~--~--~~-------~~~~~gi~~~~~G~~~~~i~v~G-k~a 199 (291)
++.+ +. + ++.++... . +. .....+++.+++| .+++|+++| +++
T Consensus 160 -------~~~~------------d~--~---~~~d~~~~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~~~ 214 (487)
T 2qyv_A 160 -------WLRS------------EI--L---INTDTEENGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLRGG 214 (487)
T ss_dssp -------CCCC------------SE--E---EECCCCCTTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCCCC
T ss_pred -------ccCC------------CE--E---EEEccCCCCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccCCc
Confidence 1110 10 1 22222210 0 00 0001223345677 899999999 899
Q ss_pred CCCCCCCCCC-CCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCccccccCCCCceEEEEEEeecCCCcccccCceeEEEe
Q 022852 200 HAGTVPMSMR-QDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEARNLSL 278 (291)
Q Consensus 200 Hags~P~~~g-~nAi~~aa~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~i~~G~~~~NvIP~~a~~~~~ 278 (291)
|||..| +.| .|||.++++++.+|+.+. +..+++++.|++| .+.|+||++|+ +.+
T Consensus 215 Hsg~~~-~~g~~nAi~~~~~~i~~l~~~~----------------------~~~~~~v~~i~gG-~~~NvIP~~a~-~~~ 269 (487)
T 2qyv_A 215 HSGVDI-HTGRANAIKVLLRFLAELQQNQ----------------------PHFDFTLANIRGG-SIRNAIPRESV-ATL 269 (487)
T ss_dssp BTTTTT-TSCCCCHHHHHHHHHHHHHHHC----------------------TTCCEEEEEEEEE-SCTTBCCCCEE-EEE
T ss_pred cCCccc-ccCCCCHHHHHHHHHHHHhhcc----------------------CCCcEEEEEEeCC-CcCcccCCceE-EEE
Confidence 965444 665 799999999999998762 2456899999999 99999999999 999
Q ss_pred ec
Q 022852 279 DD 280 (291)
Q Consensus 279 D~ 280 (291)
|+
T Consensus 270 ~~ 271 (487)
T 2qyv_A 270 VF 271 (487)
T ss_dssp EE
T ss_pred Ee
Confidence 99
No 25
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.94 E-value=1.8e-26 Score=221.29 Aligned_cols=231 Identities=17% Similarity=0.120 Sum_probs=157.3
Q ss_pred hHHHHHHHHHHHHHHcCCe---EEEcc----cccEEEEEeCCCCCCCEEEEcccCCCCCCC-------------------
Q 022852 4 ASVRAGNLIRQWMEDAGLR---TWVDH----LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------- 57 (291)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~---v~~d~----~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~------------------- 57 (291)
+|.+++++|+++|+++|++ ++..+ ..||+|+++|. ..++|+|.+||||||..
T Consensus 46 ~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~~~g~--~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~ 123 (472)
T 3pfe_A 46 YMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEIPGQ--IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLL 123 (472)
T ss_dssp HHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEEECCS--EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEE
T ss_pred hHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEEEcCC--CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEE
Confidence 4899999999999999984 54322 35899999872 45899999999999852
Q ss_pred --CC-CCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcchhhhccCCCCCcHHHH
Q 022852 58 --GI-FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (291)
Q Consensus 58 --g~-~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~e~ 134 (291)
++ .|||++++++|++++.|++.+. .+. +|.|+|+++||.+. .|++.+.... .+.
T Consensus 124 ~grG~~D~K~~~a~~l~a~~~l~~~~~--~~~-~v~~~~~~~EE~g~-----~g~~~~~~~~---------------~~~ 180 (472)
T 3pfe_A 124 YGRGGADDGYSAYASLTAIRALEQQGL--PYP-RCILIIEACEESGS-----YDLPFYIELL---------------KER 180 (472)
T ss_dssp ESTTCCCCCHHHHHHHHHHHHHHHTTC--CCE-EEEEEEESCGGGTS-----TTHHHHHHHH---------------HHH
T ss_pred EEeCcccCcHHHHHHHHHHHHHHHcCC--CCC-cEEEEEEeCCCCCC-----hhHHHHHHHh---------------Hhh
Confidence 23 4999999999999999999886 566 99999999999842 3777543110 000
Q ss_pred HHHCCCChhhHHhhhhcCCCCceeeEEEeeeccCccccccCcccceEEcccCcEEEE--EEEEecCCCCCCCCCCCC-CC
Q 022852 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLK--VTVRGSQGHAGTVPMSMR-QD 211 (291)
Q Consensus 135 l~~~g~~~~~~~~~~~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi~~~~~G~~~~~--i~v~Gk~aHags~P~~~g-~n 211 (291)
+. +++.+.+ +| ++. .+ .....+..|++|..+++ |+++|+++|| +.| +.. .|
T Consensus 181 ~~----------------~~d~~~~---~~--~~~-~~--~~~~~i~~g~~G~~~~~~~v~~~G~~~H~-~~~-~~~~~n 234 (472)
T 3pfe_A 181 IG----------------KPSLVIC---LD--SGA-GN--YEQLWMTTSLRGNLVGKLTVELINEGVHS-GSA-SGIVAD 234 (472)
T ss_dssp HC----------------CCSEEEE---EC--CBC-SC--SSSCEEEEEECEEEEEEEEEESCSSCBCH-HHH-TTTSCC
T ss_pred cc----------------CCCEEEE---eC--CCc-CC--CCCeeEEEeeeEEEEEEEEEEeCCCCccc-CCC-CCCCCC
Confidence 00 1222222 44 221 11 12345778899999887 5558999995 678 644 59
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcccCCCCCc------------------------cccccCCC-----------CceEEE
Q 022852 212 PMTAAAELIVLLERLCKHPKDFLSYDGRSNC------------------------STLESLSS-----------SLVCTV 256 (291)
Q Consensus 212 Ai~~aa~~i~~l~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~-----------~~~~~v 256 (291)
||.+++++|.+|+.+......+....+.... ...++..+ .+++|+
T Consensus 235 ai~~~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i 314 (472)
T 3pfe_A 235 SFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTV 314 (472)
T ss_dssp HHHHHHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEE
Confidence 9999999999998873100000000000000 00001111 579999
Q ss_pred EEEeec---CCCcccccCceeEEEeecceeeEE
Q 022852 257 GEISSW---PSASNVIPGEARNLSLDDGYFLLY 286 (291)
Q Consensus 257 g~i~~G---~~~~NvIP~~a~~~~~D~r~~~~~ 286 (291)
+.|++| +++.|+||++|+ +.+|+|+++..
T Consensus 315 ~~i~gG~~~g~a~NvIP~~a~-~~~diR~~~~~ 346 (472)
T 3pfe_A 315 TGADGFPAIADAGNVMRPVTS-LKLSMRLPPLV 346 (472)
T ss_dssp EEEESCCCTTTCCSCBCSEEE-EEEEEEECTTC
T ss_pred eeeecCcCCCCCCCEeCCccE-EEEEeecCCCC
Confidence 999997 368999999999 99999998754
No 26
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.93 E-value=1e-25 Score=217.20 Aligned_cols=254 Identities=16% Similarity=0.149 Sum_probs=147.8
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEcccccEEEEEe-CCCCCCCEEEEcccCCCCCCC--------------------CCCCc
Q 022852 4 ASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVE-GLNASAQALLIGSHLDTVVDA--------------------GIFDG 62 (291)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~-g~~~~~~~l~l~sH~DtV~~~--------------------g~~D~ 62 (291)
.+.++++||+++|+++|++++.. .|++++++ |. ..|.|+|.+|+||||.+ |..||
T Consensus 64 ~~~~~~~~l~~~l~~~G~~~~~~--~~~~~~~~~g~--~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~ 139 (492)
T 3khx_A 64 GPRKALDYMYEIAHRDGFTTHDV--DHIAGRIEAGK--GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDD 139 (492)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEE--TTTEEEEEEEC--SSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTT
T ss_pred HHHHHHHHHHHHHHHcCCcceEe--CCEEEEEEeCC--CCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccC
Confidence 45799999999999999998653 57666654 32 35899999999999974 45699
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcc-hhhhccCCCCCcHHHHHHHCCCC
Q 022852 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPV-SALRVSDKSGVTVLDALRENSID 141 (291)
Q Consensus 63 ~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~-~~~~~~d~~g~~~~e~l~~~g~~ 141 (291)
|++++++|.+++.|++.+. +++++|.|+|++|||.+. .|++.+...... +..-..|.+...+ .|..
T Consensus 140 Kg~~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~g~-----~g~~~~~~~~~~~~~~~~~d~~~p~~------~g~~ 206 (492)
T 3khx_A 140 KGPTIAAYYAIKILEDMNV--DWKKRIHMIIGTDEESDW-----KCTDRYFKTEEMPTLGFAPDAEFPCI------HGEK 206 (492)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCSSEEEEEEECCTTCCC-----CTTSHHHHHSCCCSEEECSSCSSCSC------CCBC
T ss_pred cHHHHHHHHHHHHHHHcCC--CCCCCEEEEEECCccCCC-----cCHHHHHHhCcCCCEEEecCCCccEE------EecC
Confidence 9999999999999999887 789999999999999842 478776543321 1000011100000 0000
Q ss_pred hhh--HHhhh---------------------hcCCCCceeeEEEeeeccCccccccCcccce---EEcccCcE-----EE
Q 022852 142 IAE--ESLLQ---------------------LKYDPASVWGYIEVHIEQGPVLEWVGFPLGV---VQGIAGQT-----RL 190 (291)
Q Consensus 142 ~~~--~~~~~---------------------~~~~~~~i~a~~elh~e~g~~~~~~~~~~gi---~~~~~G~~-----~~ 190 (291)
+-. ....+ ....|+...+ +..+|... .......+. ..+++|.. |+
T Consensus 207 G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~a---iv~ept~~-~~~~~~~~~~~~~~g~kG~~~~~~~~~ 282 (492)
T 3khx_A 207 GITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEA---RVLVKENM-TDVIQDFEYFLEQNHLQGDSTVDSGIL 282 (492)
T ss_dssp EEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEE---EEEECSCH-HHHHHHHHHHHHHTTCEEEEEEETTEE
T ss_pred cEEEEEEEEeccccccccccceeEEecccccCCcCCchHhe---Eeecccch-HHHHHHHHHHHhhcCceeEEEecCCeE
Confidence 000 00000 0000111111 11122100 000000000 12468888 99
Q ss_pred EEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH------HHhcCCCCCcc--cCC-CCCccccccCCCCceEEEEEEee
Q 022852 191 KVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE------RLCKHPKDFLS--YDG-RSNCSTLESLSSSLVCTVGEISS 261 (291)
Q Consensus 191 ~i~v~Gk~aHags~P~~~g~nAi~~aa~~i~~l~------~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~vg~i~~ 261 (291)
+|+++|+++|| ++| +.|+|||.+++++|.+|+ .+.......+. +++ .......++..+.+++|+|.|++
T Consensus 283 ~i~v~GkaaHa-s~P-~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~d~~~G~~t~n~g~i~~ 360 (492)
T 3khx_A 283 VLTVEGKAVHG-MDP-SIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVITY 360 (492)
T ss_dssp EEEEECBCCCC--------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTTTCTTSGGGTCC-------CCEEEEEEEEE
T ss_pred EEEEEeEEccc-CCC-ccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhCCCCCccccCCccccCCcCccEEeeeEEEE
Confidence 99999999995 689 999999999999998876 22100000000 000 00000012235789999999999
Q ss_pred cCCCcccccCceeEEEeecceeeEEe
Q 022852 262 WPSASNVIPGEARNLSLDDGYFLLYS 287 (291)
Q Consensus 262 G~~~~NvIP~~a~~~~~D~r~~~~~~ 287 (291)
| . |++|+ +.+|+|+.+.++
T Consensus 361 g-~-----P~~a~-~~idiR~~~~~~ 379 (492)
T 3khx_A 361 D-N-----ENAGL-FGINLRYPEGFE 379 (492)
T ss_dssp E-T-----TTCCE-EEEEEEECTTCC
T ss_pred e-c-----CCEEE-EEEEeeCCCCCC
Confidence 9 4 99999 999999987654
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.92 E-value=1.4e-24 Score=207.63 Aligned_cols=242 Identities=17% Similarity=0.111 Sum_probs=152.1
Q ss_pred HhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCCCC---------------------CCCC
Q 022852 3 PASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------GIFD 61 (291)
Q Consensus 3 ~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~---------------------g~~D 61 (291)
.++.++++||.++|+++|++++.....++++.+ |. +.|+|+|.||+||||.+ |.+|
T Consensus 43 ~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~-g~--~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D 119 (470)
T 1lfw_A 43 KGPVDAMTKFLSFAKRDGFDTENFANYAGRVNF-GA--GDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSAD 119 (470)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEETTTEEEEEE-CC--CSSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSS
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEecCeEEEEEe-CC--CCCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCccc
Confidence 356899999999999999998754323467777 53 35899999999999853 2379
Q ss_pred cHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCcc-hhhhccCCCCCcHHHHHHHCCC
Q 022852 62 GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPV-SALRVSDKSGVTVLDALRENSI 140 (291)
Q Consensus 62 ~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~~-~~~~~~d~~g~~~~e~l~~~g~ 140 (291)
||++++++|++++.|++.+. +++++|+|+|+++||++ +.|++.+...... +..-..|.++.
T Consensus 120 ~K~~~a~~l~a~~~l~~~~~--~~~~~i~~i~~~~EE~g-----~~G~~~~~~~~~~~~~~~~~D~~~~----------- 181 (470)
T 1lfw_A 120 DKGPSLTAYYGMLLLKEAGF--KPKKKIDFVLGTNEETN-----WVGIDYYLKHEPTPDIVFSPDAEYP----------- 181 (470)
T ss_dssp SHHHHHHHHHHHHHHHHHTC--CCSSEEEEEEESCTTTT-----CHHHHHHHHHSCCCSEEEESSEESS-----------
T ss_pred ChHHHHHHHHHHHHHHHcCC--CCCCCEEEEEecCcccC-----CccHHHHHHhCcCCcEEEEeCCCce-----------
Confidence 99999999999999999887 78999999999999983 3478776542110 00000110000
Q ss_pred ChhhHHhhhhcCCCCceeeEEEeeeccCc-------cccccCcccceEE--------------------------cccCc
Q 022852 141 DIAEESLLQLKYDPASVWGYIEVHIEQGP-------VLEWVGFPLGVVQ--------------------------GIAGQ 187 (291)
Q Consensus 141 ~~~~~~~~~~~~~~~~i~a~~elh~e~g~-------~~~~~~~~~gi~~--------------------------~~~G~ 187 (291)
..+++ .-..++++++++.. .....+...+++. +++|.
T Consensus 182 ----~~~ge------~g~~~~~l~~~~~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 251 (470)
T 1lfw_A 182 ----IINGE------QGIFTLEFSFKNDDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLAYESFLADKELDGS 251 (470)
T ss_dssp ----EEEEE------CEEEEEEEEECCCCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHHHHHHHHHHTCEEE
T ss_pred ----EEEec------cceEEEEEEEccCCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHHHHHHhhhhccccc
Confidence 00010 00123456554311 0000011111110 24566
Q ss_pred E-----EEEEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHH------HHh----cCCCCCcccCCCC-CccccccCCCC
Q 022852 188 T-----RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE------RLC----KHPKDFLSYDGRS-NCSTLESLSSS 251 (291)
Q Consensus 188 ~-----~~~i~v~Gk~aHags~P~~~g~nAi~~aa~~i~~l~------~~~----~~~~~~~~~~~~~-~~~~~~~~~~~ 251 (291)
. +++|+++|+++|+ +.| +.|+||+.++++++.+|+ ++. ..... .++... .....++..+.
T Consensus 252 ~~~~~~~~~i~v~G~~~Ha-~~P-~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~ 327 (470)
T 1lfw_A 252 FEINDESADIVLIGQGAHA-SAP-QVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHE--DFYGKKLGIFHHDDLMGD 327 (470)
T ss_dssp EEEETTEEEEEEECBCCBT-TCG-GGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTT--CTTSTTTTCCCEETTTEE
T ss_pred eeecCCcEEEEEeecccCC-CCC-ccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCC--CCcccccCCccccccccc
Confidence 4 8999999999995 689 999999999999998775 221 11000 000000 00001122345
Q ss_pred ceEEEEEEeecCCCcccccCc-eeEEEeecceeeEEe
Q 022852 252 LVCTVGEISSWPSASNVIPGE-ARNLSLDDGYFLLYS 287 (291)
Q Consensus 252 ~~~~vg~i~~G~~~~NvIP~~-a~~~~~D~r~~~~~~ 287 (291)
+++++|.|++ +|++ |+ +.+|+|+++..+
T Consensus 328 ~t~~~g~i~~-------~p~~~a~-~~~diR~~~~~~ 356 (470)
T 1lfw_A 328 LASSPSMFDY-------EHAGKAS-LLNNVRYPQGTD 356 (470)
T ss_dssp CEEEEEEEEE-------ETTSCEE-EEEEEEECTTCC
T ss_pred ceEEEEEEEE-------cCCceEE-EEEEEecCCCCC
Confidence 6788887764 6899 99 999999987543
No 28
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.71 E-value=6.3e-17 Score=137.69 Aligned_cols=104 Identities=21% Similarity=0.165 Sum_probs=88.0
Q ss_pred hHHHHHHHHHHHHHHcCCeEEEcc----cccEEEEEeCCCCCCCEEEEcccCCCCCCC----------------------
Q 022852 4 ASVRAGNLIRQWMEDAGLRTWVDH----LGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (291)
Q Consensus 4 ~E~~~~~~i~~~l~~~G~~v~~d~----~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~---------------------- 57 (291)
+|.++++||+++|+++|++++++. ..|++++++|..++.+.|+|.+|+||||.+
T Consensus 30 ~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~Gr 109 (198)
T 1q7l_A 30 DYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYAR 109 (198)
T ss_dssp CHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECT
T ss_pred CHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeC
Confidence 689999999999999999987653 348999998765445899999999999863
Q ss_pred CCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhh
Q 022852 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (291)
Q Consensus 58 g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~ 113 (291)
|.+|||++++++|++++.|++.+. +++++|.|+|+++||.++ +.|++.++
T Consensus 110 Ga~D~K~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g~----~~Ga~~~~ 159 (198)
T 1q7l_A 110 GAQDMKCVSIQYLEAVRRLKVEGH--RFPRTIHMTFVPDEEVGG----HQGMELFV 159 (198)
T ss_dssp TTTTTHHHHHHHHHHHHHHHHTTC--CCSSCEEEEEESCGGGTS----TTTHHHHT
T ss_pred cchhchHHHHHHHHHHHHHHHcCC--CCCCCEEEEEEcccccCc----cccHHHHH
Confidence 348999999999999999999886 788999999999999841 34887664
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.69 E-value=1.3e-16 Score=142.06 Aligned_cols=103 Identities=20% Similarity=0.230 Sum_probs=86.9
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEEc---ccccEEEEEeCCCCCCCEEEEcccCCCCCCC--------------------
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~d---~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~-------------------- 57 (291)
.|++|.++++||+++|+++|++++.. ..+|+++++ |. +.|.|+|.+|+||||.+
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~--~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~ 97 (269)
T 4h2k_A 21 ISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKH-GT--SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLY 97 (269)
T ss_dssp BTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEE-CS--SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEE
T ss_pred CCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEe-CC--CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEE
Confidence 36788899999999999999998765 356899998 53 35899999999999964
Q ss_pred --CCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhh
Q 022852 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (291)
Q Consensus 58 --g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~ 112 (291)
|..|||+|++++|++++.|++.+. +++++|.|+|+++||.+. ..|++.+
T Consensus 98 grG~~D~k~g~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~g~----~~Ga~~~ 148 (269)
T 4h2k_A 98 GRGAADMKGSLAAMIVAAEEYVKANP--NHKGTIALLITSDEEATA----KDGTIHV 148 (269)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCSSSCC----TTSHHHH
T ss_pred eCCcccChHHHHHHHHHHHHHHHhCC--CCCccEEEEEEeccccCc----ccCHHHH
Confidence 567999999999999999998776 688999999999999842 1377754
No 30
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.68 E-value=7.5e-17 Score=144.70 Aligned_cols=108 Identities=21% Similarity=0.330 Sum_probs=93.3
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEccc-------ccEEEEEeCCCCCCCEEEEcccCCCCCCC-CCCCcHHHHHHHHHHH
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDHL-------GNVHGRVEGLNASAQALLIGSHLDTVVDA-GIFDGSLGIITAISAL 73 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~~-------gnv~a~~~g~~~~~~~l~l~sH~DtV~~~-g~~D~~~gv~a~l~a~ 73 (291)
|.+|.++++||+++|+++|++++.+.. .||+++++|..+ .+.|+|.+|+|+|+.+ |+.|+++|++++|+++
T Consensus 31 ~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~-~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~ 109 (284)
T 1tkj_A 31 RPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDP-NKVLMAGAHLDSVSSGAGINDNGSGSAAVLETA 109 (284)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEE-EEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCC-CCEEEEEeecCCCCCCCCCccChHHHHHHHHHH
Confidence 348999999999999999999887654 489999987532 4789999999999987 8999999999999999
Q ss_pred HHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCc
Q 022852 74 KVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (291)
Q Consensus 74 ~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (291)
+.|++.+. +++++|+|+|+++||.+ +.||+.++..+.
T Consensus 110 ~~l~~~~~--~~~~~i~~~~~~~EE~g-----~~Gs~~~~~~~~ 146 (284)
T 1tkj_A 110 LAVSRAGY--QPDKHLRFAWWGAEELG-----LIGSKFYVNNLP 146 (284)
T ss_dssp HHHHHTTC--CCSEEEEEEEESCGGGT-----SHHHHHHHHHSC
T ss_pred HHHHhcCC--CCCceEEEEEECCcccC-----CcCHHHHHhhCc
Confidence 99998876 78899999999999983 569998876543
No 31
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.65 E-value=8.6e-16 Score=139.44 Aligned_cols=108 Identities=19% Similarity=0.274 Sum_probs=90.8
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEcc------------cccEEEEEeCCCCCCCEEEEcccCCCCCCC------------
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~------------~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~------------ 57 (291)
|..|.++++||.++|+++|++++.+. ..||+|+++|.. .+.|++++|+|+|+.+
T Consensus 44 s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~--~~~ill~aH~Dsv~~~~~~p~~~~~~~~ 121 (309)
T 3tc8_A 44 TAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPEN--SKRVLLFAHWDSRPYSDHDPDPSKHRTP 121 (309)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEEEEEEECCCCSCCTTCSSGGGTTSC
T ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCC--CceEEEEecccCCCCCCCCccccCCCcc
Confidence 67899999999999999999987654 369999998852 4799999999999975
Q ss_pred --CCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcc--cCCC------cccchhhhcc
Q 022852 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR--FQST------FLGSAALAGI 115 (291)
Q Consensus 58 --g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~--~~~~------~~Gs~~~~~~ 115 (291)
|+.|+++|++++|++++.|++. +++++|.|+|+.+||.+. |... +.||++++.+
T Consensus 122 ~~Ga~D~~sGva~~Le~ar~l~~~----~~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~ 185 (309)
T 3tc8_A 122 LDGADDGGSGVGALLEIARQIGQK----APGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKN 185 (309)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHS
T ss_pred ccCcccchHhHHHHHHHHHHHHhC----CCCCcEEEEEECccccccccccccccccccchhHHHHHhC
Confidence 8899999999999999999987 478999999999999831 2111 3799887654
No 32
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.64 E-value=9e-16 Score=139.55 Aligned_cols=108 Identities=20% Similarity=0.288 Sum_probs=84.2
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEcc------------cccEEEEEeCCCCCCCEEEEcccCCCCCCC------------
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~------------~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~------------ 57 (291)
|..|.++++||+++|+++|++++++. ..||+|+++|. ..+.|++++|+|||+.+
T Consensus 46 s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~--~~~~ill~aH~Dsv~~~~~~p~~~~~~~~ 123 (314)
T 3gux_A 46 TQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPE--SKKRILLCAHWDSRPYADNDPDPKNHHTP 123 (314)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTT--CSSEEEEEEECCCCC--------------
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCC--CCceEEEEccccCCCcCCCCcccccCCcc
Confidence 67899999999999999999987654 26999999885 24799999999999875
Q ss_pred --CCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcc--cCC-------Ccccchhhhcc
Q 022852 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR--FQS-------TFLGSAALAGI 115 (291)
Q Consensus 58 --g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~--~~~-------~~~Gs~~~~~~ 115 (291)
|+.|+++|++++|++++.|++. +++++|.|+|+.+||.+. |.. .+.||++++.+
T Consensus 124 ~~GA~D~~sGva~~Le~ar~l~~~----~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~ 188 (314)
T 3gux_A 124 ILGVNDGASGVGVLLEIARQIQKE----QPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWART 188 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSCCC-----------CTTSCHHHHHHHHS
T ss_pred cCCCcccHHHHHHHHHHHHHHHhC----CCCCcEEEEEECCccccccccccccccccccchhHHHHHhC
Confidence 8899999999999999999987 478999999999999842 100 12788887643
No 33
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.63 E-value=5.8e-16 Score=137.65 Aligned_cols=102 Identities=20% Similarity=0.256 Sum_probs=85.2
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEc---ccccEEEEEeCCCCCCCEEEEcccCCCCCCC---------------------
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d---~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~--------------------- 57 (291)
|++|.++++||+++|+++|++++.. ..+|++|++ |. +.|.|+|.||+||||.+
T Consensus 22 s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~-g~--~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g 98 (268)
T 3t68_A 22 TPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARR-GT--QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHG 98 (268)
T ss_dssp TTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEE-CS--SSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEES
T ss_pred CCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEe-CC--CCCeEEEEccccccCCCCcccCCCCCCccEEECCEEEe
Confidence 6788899999999999999987643 457899998 54 35899999999999864
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhh
Q 022852 58 -GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (291)
Q Consensus 58 -g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~ 112 (291)
|..|||+|++++|++++.|++.+. +++++|.|+|+++||.+. ..|++.+
T Consensus 99 ~G~~D~k~g~a~~l~a~~~l~~~~~--~~~~~v~~~~~~~EE~g~----~~Ga~~~ 148 (268)
T 3t68_A 99 RGAADMKGSLACMIVAVERFIAEHP--DHQGSIGFLITSDEEGPF----INGTVRV 148 (268)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHHCT--TCSSEEEEEEESCTTSSS----CCHHHHH
T ss_pred cCcccchHHHHHHHHHHHHHHHhCC--CCCCcEEEEEEeCCccCc----ccCHHHH
Confidence 567999999999999999988776 688999999999999842 2377765
No 34
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.62 E-value=8.6e-16 Score=138.74 Aligned_cols=107 Identities=25% Similarity=0.365 Sum_probs=89.1
Q ss_pred CHhHHHHHHHHHHHHHHcC--Ce-EEEcc-------cccEEEEEeCCCCCCCEEEEcccCCCCC---------CCCCCCc
Q 022852 2 SPASVRAGNLIRQWMEDAG--LR-TWVDH-------LGNVHGRVEGLNASAQALLIGSHLDTVV---------DAGIFDG 62 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G--~~-v~~d~-------~gnv~a~~~g~~~~~~~l~l~sH~DtV~---------~~g~~D~ 62 (291)
|++|.++++||+++|+++| ++ ++++. .+||+++++|.....+.|++.+|+|||| ..|+.|+
T Consensus 39 s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~ 118 (299)
T 1rtq_A 39 TTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDD 118 (299)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTT
T ss_pred CchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEeccccCCCcCcCCCcccCCCccc
Confidence 6789999999999999986 44 54443 3799999987532247899999999998 3588899
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhcc
Q 022852 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGI 115 (291)
Q Consensus 63 ~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~ 115 (291)
|+|++++|++++.|++.+. +++++|.|+|+.+||. ++.||+.++..
T Consensus 119 ~~g~a~~l~~~~~l~~~~~--~~~~~i~~~~~~~EE~-----g~~Gs~~~~~~ 164 (299)
T 1rtq_A 119 ASGIAAVTEVIRVLSENNF--QPKRSIAFMAYAAEEV-----GLRGSQDLANQ 164 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCSEEEEEEEESCGGG-----TSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC--CCCceEEEEEECCccC-----CchhHHHHHHh
Confidence 9999999999999999876 7889999999999998 35699877543
No 35
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.60 E-value=2.4e-15 Score=137.62 Aligned_cols=109 Identities=23% Similarity=0.295 Sum_probs=89.3
Q ss_pred CHhHHHHHHHHHHHHHH--cCCeEEEcc-----------cccEEEEEeCCCCCCCEEEEcccCCCCCCC--------CCC
Q 022852 2 SPASVRAGNLIRQWMED--AGLRTWVDH-----------LGNVHGRVEGLNASAQALLIGSHLDTVVDA--------GIF 60 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~--~G~~v~~d~-----------~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~--------g~~ 60 (291)
|..+.++++||.++|++ .|++++.+. .+||+|+++|. ..+.|++++|+|||+.+ |+.
T Consensus 49 s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~--~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~ 126 (329)
T 2afw_A 49 SPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPT--AKRHLVLACHYDSKYFSHWNNRVFVGAT 126 (329)
T ss_dssp SHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTT--SSEEEEEEEECCCCCCCCBTTBCCCCTT
T ss_pred CHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCC--CCcEEEEEEeccCCCcCcccCcCCCCcc
Confidence 45677899999999999 999987653 47999999875 35789999999999976 899
Q ss_pred CcHHHHHHHHHHHHHHHHc--------CCCCCCCCCEEEEEecCCCCcccCC---Ccccchhhhc
Q 022852 61 DGSLGIITAISALKVLKST--------GKLGKLKRPVEVIAFSDEEGVRFQS---TFLGSAALAG 114 (291)
Q Consensus 61 D~~~gv~a~l~a~~~L~~~--------~~~~~~~~~i~~v~~~dEE~~~~~~---~~~Gs~~~~~ 114 (291)
|+++|++++|++++.|++. +. +++++|.|+|+.+||..+|-. ++.||+.+++
T Consensus 127 D~~sGva~~le~ar~l~~~~~~~~~~~g~--~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~ 189 (329)
T 2afw_A 127 DSAVPCAMMLELARALDKKLLSLKTVSDS--KPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAA 189 (329)
T ss_dssp TTHHHHHHHHHHHHHTHHHHHTTC--------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHhhhcccccC--CCCccEEEEEecCcccccccCCCccchhHHHHHH
Confidence 9999999999999999875 23 578999999999999744311 4679987754
No 36
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.51 E-value=4.1e-14 Score=129.29 Aligned_cols=107 Identities=19% Similarity=0.314 Sum_probs=90.2
Q ss_pred CHhHHHHHHHHHHHHHHc--CCeEEEccc-----------ccEEEEEeCCCCCCCEEEEcccCCCCCC-------CCCCC
Q 022852 2 SPASVRAGNLIRQWMEDA--GLRTWVDHL-----------GNVHGRVEGLNASAQALLIGSHLDTVVD-------AGIFD 61 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~--G~~v~~d~~-----------gnv~a~~~g~~~~~~~l~l~sH~DtV~~-------~g~~D 61 (291)
|..+.++++||.++|+++ |++|+.|.. .||||+++|.. .+.|++++|+|+|+. .|+.|
T Consensus 57 S~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~--~~~ivl~aH~Dsv~~~~g~~~~~GA~D 134 (330)
T 3pb6_X 57 SPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRA--ARHLTLACHYDSKLFPPGSTPFVGATD 134 (330)
T ss_dssp SHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTS--SEEEEEEEECCCCCCCTTSCCCCCTTT
T ss_pred CHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCC--CceEEEEeccCCCCCCCCCcCcCCCcC
Confidence 678899999999999999 898887653 69999998863 478999999999973 38899
Q ss_pred cHHHHHHHHHHHHHHHHc-----CCCCCCCCCEEEEEecCCCCcccC-----CCcccchhhhc
Q 022852 62 GSLGIITAISALKVLKST-----GKLGKLKRPVEVIAFSDEEGVRFQ-----STFLGSAALAG 114 (291)
Q Consensus 62 ~~~gv~a~l~a~~~L~~~-----~~~~~~~~~i~~v~~~dEE~~~~~-----~~~~Gs~~~~~ 114 (291)
+.+|++++|++++.|++. +. +++++|.|+|+.+||. |+ .++.||+++++
T Consensus 135 ~asGva~lLe~ar~l~~~~~~~~~~--~~~~~i~fv~~~~EE~--f~~w~~~~gl~GS~~~a~ 193 (330)
T 3pb6_X 135 SAVPCALLLELAQALDLELSRAKKQ--AAPVTLQLLFLDGEEA--LKEWGPKDSLYGSRHLAQ 193 (330)
T ss_dssp THHHHHHHHHHHHHTHHHHHHHHHT--TCSEEEEEEEESCCSC--SSCCSTTSSCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHhhcccC--CCCCcEEEEEEcCccc--ccccCCCCCCccHHHHHH
Confidence 999999999999999873 23 6889999999999997 22 15789998764
No 37
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.47 E-value=1e-14 Score=133.87 Aligned_cols=99 Identities=25% Similarity=0.278 Sum_probs=79.9
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCCC----------------C--------
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD----------------A-------- 57 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~----------------~-------- 57 (291)
|++|.+++++|+++|+++|++++++..+|++++++|.. +.|.|+|.+|+|+|+. |
T Consensus 14 sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~~-~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~ 92 (340)
T 2fvg_A 14 SGDEGKVRDFIKSKIEGLVDNLYTDVLGNLIALKRGRD-SSKKLLVSAHMDEVGFVVSKIEKDGKVSFLPVGGVDPRILP 92 (340)
T ss_dssp TTCCHHHHHHHHHHHGGGSSEEEECTTSCEEEEECCSE-EEEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGCT
T ss_pred CCchHHHHHHHHHHHHhhCCEEEEeCCCcEEEEecCCC-CCceEEEEeccCcCcEEEEEECCCCEEEEEeeCCccccccc
Confidence 67899999999999999999999999999999987642 2478999999999981 1
Q ss_pred ----------------------------------------------------C-------------------CCCcHHHH
Q 022852 58 ----------------------------------------------------G-------------------IFDGSLGI 66 (291)
Q Consensus 58 ----------------------------------------------------g-------------------~~D~~~gv 66 (291)
| +.|||+|+
T Consensus 93 ~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i~gra~D~k~g~ 172 (340)
T 2fvg_A 93 GKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRAVGKAFDDRAGC 172 (340)
T ss_dssp TCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEEEESCHHHHHHH
T ss_pred CCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEEeeccCccHHHH
Confidence 2 37999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhh
Q 022852 67 ITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (291)
Q Consensus 67 ~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~ 112 (291)
+++|++++.|+ +++++|.|+|+++||.+ +.|++.+
T Consensus 173 a~~l~a~~~l~------~~~~~i~~~~~~~EE~G-----~~G~~~~ 207 (340)
T 2fvg_A 173 SVLIDVLESGV------SPAYDTYFVFTVQEETG-----LRGSAVV 207 (340)
T ss_dssp HHHHHHHHTCC------CCSEEEEEEEECCCC----------CHHH
T ss_pred HHHHHHHHHhh------ccCCcEEEEEEcccccc-----hhhhHHH
Confidence 99999998876 25689999999999984 3477654
No 38
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.45 E-value=5.9e-13 Score=120.71 Aligned_cols=93 Identities=18% Similarity=0.229 Sum_probs=80.9
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEcc------------cccEEEEEeCCCCCCCEEEEcccCCCCCCC------------
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------ 57 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~------------~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~------------ 57 (291)
|....++++||.++|+++|++|+.+. ..||||+++|.. .+.|+|++|+|+++.+
T Consensus 44 S~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~--~~~i~l~aH~Ds~~~~~~~~~~~~~~~~ 121 (309)
T 4fuu_A 44 TKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPES--KKRIALFAHWDTRPWADNDADEKNHHTP 121 (309)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTC--SSEEEEEEECCCCSCCTTCSSGGGTTSC
T ss_pred CHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCC--CceEEEEeecCCCCCCCCccccccccCC
Confidence 56788999999999999999987542 248999998863 4789999999999754
Q ss_pred --CCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCc
Q 022852 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (291)
Q Consensus 58 --g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~ 100 (291)
|+.|+.+|++++|+++|.|.+. +++++|.|+|+.+||.+
T Consensus 122 ~~GA~D~aSG~a~lLE~ar~l~~~----~~~~~i~~~~~~~EE~G 162 (309)
T 4fuu_A 122 ILGANDGASGVGALLEIARLVNQQ----QPELGIDIIFLDAEDYG 162 (309)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHS----CCSSEEEEEEECSSSCC
T ss_pred cCCcccCchhHHHHHHHHHHHhhc----CCCCceEEEeecccccC
Confidence 8899999999999999999986 57899999999999974
No 39
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.44 E-value=3.9e-13 Score=121.99 Aligned_cols=110 Identities=22% Similarity=0.264 Sum_probs=89.4
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEcc------------cccEEEEEeCCCCCCCEEEEcccCCCCCCC------CCCCcH
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA------GIFDGS 63 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~------------~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~------g~~D~~ 63 (291)
|....++++||+++|+++|++|+.+. ..||||+++|.. ...|++++|+|+++.+ |+.|+.
T Consensus 28 s~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~--~~~vvl~aHyDs~~~~~~~~~~GA~Dna 105 (312)
T 4f9u_A 28 SRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQA--QNFLALACHYDSKYFPNDPGFVGATDSA 105 (312)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTS--SEEEEEEEECCCCCCTTCTTCCCTTTTH
T ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCC--CceEEEEEEEecCCCCCCCCCCCccCCc
Confidence 56778999999999999999987643 248999998853 4789999999998642 899999
Q ss_pred HHHHHHHHHHHHHHHc-----CCCCCCCCCEEEEEecCCCCcccC---CCcccchhhhcc
Q 022852 64 LGIITAISALKVLKST-----GKLGKLKRPVEVIAFSDEEGVRFQ---STFLGSAALAGI 115 (291)
Q Consensus 64 ~gv~a~l~a~~~L~~~-----~~~~~~~~~i~~v~~~dEE~~~~~---~~~~Gs~~~~~~ 115 (291)
+|++++|+++|.|.+. +. +++++|.|+|+.+||.+..+ .++.||++++.+
T Consensus 106 SGvA~lLElAR~l~~~~~~~~~~--~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~~ 163 (312)
T 4f9u_A 106 VPCAILLNTAKTLGAYLQKEFRN--RSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAK 163 (312)
T ss_dssp HHHHHHHHHHHHTHHHHTTGGGS--CSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhhccC--CCCceEEEEEecCccccccCCccccccChHHHHHH
Confidence 9999999999999753 23 57899999999999975321 136799988754
No 40
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.44 E-value=1e-13 Score=127.72 Aligned_cols=102 Identities=22% Similarity=0.287 Sum_probs=83.5
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCC----------------CC--------
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DA-------- 57 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~----------------~~-------- 57 (291)
|++|.++++||+++|+++|++++++..+|++|+++|.. ..|.|+|.||+|||+ .|
T Consensus 22 s~~e~~~~~~l~~~l~~~g~~~~~d~~gnl~a~~~g~~-~~~~ill~~H~Dtv~~~v~~i~~~G~l~~~~~Gg~~~~~~~ 100 (349)
T 2gre_A 22 SGNTAKIINFIENYVSEWNVETKRNNKGALILTVKGKN-DAQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVE 100 (349)
T ss_dssp TTCCHHHHHHHHHHTTTSSSEEEECSSSCEEEEECCSE-EEEEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTT
T ss_pred CccHHHHHHHHHHHHHHhCCEEEEecCCcEEEEecCCC-CCceEEEEecccccceeEEEECCCCeEEEEecCCCcccccc
Confidence 67788999999999999999999999999999997642 247899999999993 10
Q ss_pred ----------C---------------------------------------------------------------------
Q 022852 58 ----------G--------------------------------------------------------------------- 58 (291)
Q Consensus 58 ----------g--------------------------------------------------------------------- 58 (291)
|
T Consensus 101 ~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~~~~~~~i 180 (349)
T 2gre_A 101 GEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYI 180 (349)
T ss_dssp TCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTCCTTCEEEECCCCEECTTSEE
T ss_pred CcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCCEEEEccccEEccCCeE
Confidence 0
Q ss_pred ---CCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchh
Q 022852 59 ---IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAA 111 (291)
Q Consensus 59 ---~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~ 111 (291)
+.|+|+|++++|++++.|++.+. +++++|.|+|+++||.+ +.|++.
T Consensus 181 ~gr~~D~k~g~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~G-----~~g~~~ 229 (349)
T 2gre_A 181 KSRHLDDKVSVAILLKLIKRLQDENV--TLPYTTHFLISNNEEIG-----YGGNSN 229 (349)
T ss_dssp EESCCTTHHHHHHHHHHHHHHHHHTC--CCSEEEEEEEESCC---------CCCCC
T ss_pred EEeeccchHHHHHHHHHHHHHHhccC--CCCceEEEEEECcccCC-----chhhcc
Confidence 38999999999999999998876 67899999999999984 246654
No 41
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.42 E-value=3.3e-13 Score=125.41 Aligned_cols=101 Identities=22% Similarity=0.310 Sum_probs=85.8
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCCC-------------------------
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD------------------------- 56 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~------------------------- 56 (291)
|++|.+++++|+++|+++|+++++|..+|++|+++|.. ..|.|+|.+|+|+|+.
T Consensus 23 sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~~-~~~~vll~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~ 101 (373)
T 1vhe_A 23 PGNEREVRQVMKSYIEPFADEVTTDRLGSLIAKKTGAE-NGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVML 101 (373)
T ss_dssp TTCCHHHHHHHHHHHGGGCSEEEECTTCCEEEEEESST-TSCEEEEEEECCCCEEEEEEECTTSCEEEEEESCCCGGGTT
T ss_pred CCchHHHHHHHHHHHHhhCCEEEEcCCCcEEEEecCCC-CCceEEEEecCCcCCEEEEEECCCCeEEEEEeCCcchhhcc
Confidence 67899999999999999999999999999999988753 3489999999999981
Q ss_pred -------------------------------------------C--------------C---------------------
Q 022852 57 -------------------------------------------A--------------G--------------------- 58 (291)
Q Consensus 57 -------------------------------------------~--------------g--------------------- 58 (291)
+ |
T Consensus 102 ~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~~~~i~gr 181 (373)
T 1vhe_A 102 AQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAK 181 (373)
T ss_dssp TCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSTTEEEET
T ss_pred CCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCCeEEec
Confidence 0 1
Q ss_pred CCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhh
Q 022852 59 IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (291)
Q Consensus 59 ~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~ 112 (291)
+.|||+|++++|++++.|++.+ ++++|.|+|+++||.+ +.|++.+
T Consensus 182 ~~D~k~g~a~~l~a~~~l~~~~----~~~~v~~~~~~~EE~G-----~~G~~~~ 226 (373)
T 1vhe_A 182 AWDNRIGCAIAIDVLRNLQNTD----HPNIVYGVGTVQEEVG-----LRGAKTA 226 (373)
T ss_dssp THHHHHHHHHHHHHHHHHHTSC----CSSEEEEEEESCCTTT-----SHHHHHH
T ss_pred cCccHHHHHHHHHHHHHHhhcC----CCceEEEEEECCcccC-----hhhHHHH
Confidence 5799999999999999998763 5689999999999983 3477654
No 42
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.40 E-value=1.7e-13 Score=125.17 Aligned_cols=98 Identities=24% Similarity=0.245 Sum_probs=83.1
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCC----------------CCC-------
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DAG------- 58 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~----------------~~g------- 58 (291)
|++|.+++++|+++|+++|+ +++|..+|++|+++| +.+.|+|.+|+|+|+ .||
T Consensus 18 sg~e~~~~~~l~~~l~~~g~-~~~d~~gnlia~~~~---~~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~ 93 (332)
T 2wyr_A 18 SGYEERIREEIIREIKDFAD-YKVDAIGNLIVELGE---GEERILFMAHMDEIGLLITGITDEGKLRFRKVGGIDDRLLY 93 (332)
T ss_dssp TTCCHHHHHHHHHHHTTTCC-CEECTTCCEEEEEES---SSEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGTT
T ss_pred CCcHHHHHHHHHHHHhhcCc-EEEcCCCeEEEEecC---CCceEEEEeccCcccEEEEEECCCCeEEEEecCCcChhhcc
Confidence 67899999999999999999 888999999999976 247899999999994 222
Q ss_pred -----------------------------------------------------------------------------CCC
Q 022852 59 -----------------------------------------------------------------------------IFD 61 (291)
Q Consensus 59 -----------------------------------------------------------------------------~~D 61 (291)
+.|
T Consensus 94 ~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~~~~~~~~~~i~gra~D 173 (332)
T 2wyr_A 94 GRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGKYVSTRGLD 173 (332)
T ss_dssp TEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECCCCEEETTTEEECTTHH
T ss_pred CCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEccccEEecCCeEEcccCC
Confidence 378
Q ss_pred cHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhh
Q 022852 62 GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAAL 112 (291)
Q Consensus 62 ~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~ 112 (291)
||+|++++|++++.|++.+ ++++|.|+|+++||.+ +.|++.+
T Consensus 174 ~k~g~a~~l~a~~~l~~~~----~~~~i~~~~~~~EE~G-----~~G~~~~ 215 (332)
T 2wyr_A 174 DRFGVVALIEAIKDLVDHE----LEGKVIFAFTVQEEVG-----LKGAKFL 215 (332)
T ss_dssp HHHHHHHHHHHHHTTTTSC----CSSEEEEEEESCGGGT-----SHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhcC----CCceEEEEEECccccC-----cchHHHH
Confidence 9999999999999988753 5689999999999983 3477655
No 43
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.35 E-value=2.7e-12 Score=117.46 Aligned_cols=110 Identities=19% Similarity=0.207 Sum_probs=88.6
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEcc------------cccEEEEEeCCCCCCCEEEEcccCCCCCCC-----CCCCcHH
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA-----GIFDGSL 64 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~------------~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~-----g~~D~~~ 64 (291)
|....++++||.++|+++|++|+.+. ..||||+++|.. ...|++++|+|+++.. |+.|+.+
T Consensus 55 s~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~--~~~i~l~aHyDs~~~~~~~~~GA~Dnas 132 (330)
T 4fai_A 55 TTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNA--ERYLVLSCHYDSKYMPGVEFLGATDSAV 132 (330)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTC--SEEEEEEEECCCCCCTTSCCCCTTTTHH
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCC--CcEEEEEEeecccccccCCCCCCCCccH
Confidence 56788999999999999999987542 248999998752 4689999999999753 8899999
Q ss_pred HHHHHHHHHHHHHHc---CCCCCCCCCEEEEEecCCCCcccC---CCcccchhhhcc
Q 022852 65 GIITAISALKVLKST---GKLGKLKRPVEVIAFSDEEGVRFQ---STFLGSAALAGI 115 (291)
Q Consensus 65 gv~a~l~a~~~L~~~---~~~~~~~~~i~~v~~~dEE~~~~~---~~~~Gs~~~~~~ 115 (291)
|++++|+++|.|++. +. +++++|.|+|+.+||.+..+ -++.||++++.+
T Consensus 133 G~A~lLE~Ar~l~~~~~~~~--~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~~ 187 (330)
T 4fai_A 133 PCAMLLNLAQVLQEQLKPLK--KSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAKK 187 (330)
T ss_dssp HHHHHHHHHHHTHHHHGGGG--TSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhccC--CCCccEEEEEeccccccccccccchhhhhHHHHhc
Confidence 999999999999753 33 57899999999999975211 125699988764
No 44
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.33 E-value=1.3e-16 Score=143.26 Aligned_cols=90 Identities=17% Similarity=0.233 Sum_probs=62.3
Q ss_pred CHhH-HHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCCCC---------------CCCCcHHH
Q 022852 2 SPAS-VRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------GIFDGSLG 65 (291)
Q Consensus 2 s~~E-~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~---------------g~~D~~~g 65 (291)
|++| ..+++||+++|+++|+++++|+.|||+|+++|. .|.|+|.||+||||.. |..|++..
T Consensus 25 sg~E~~~v~~~l~~~l~~~G~~v~~D~~GNlia~~~g~---~p~lll~~H~Dtvp~~v~~~~~~g~~~~~~~~~~~~~~~ 101 (354)
T 2wzn_A 25 SGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGS---SPRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETL 101 (354)
T ss_dssp TTCGGGTHHHHHHHHHHTTSSEEEECTTCCEEEEECCS---SSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGG
T ss_pred CcchHHHHHHHHHHHHHHcCCEEEEeCCCeEEEEECCC---CceEEEEeccccCCCcCCeeecCCceeeccCCCccHHHH
Confidence 6666 578999999999999999999999999999763 5899999999999853 22233222
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCc
Q 022852 66 IITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (291)
Q Consensus 66 v~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~ 100 (291)
+ +.++..+...+ .+...+.++++.+||.+
T Consensus 102 ~---~~~~~~~~~~~---~~~~~~~~~~~~~ee~~ 130 (354)
T 2wzn_A 102 V---AQRIRFFTEKG---ERYGVVGVLPPHLRRGQ 130 (354)
T ss_dssp T---TCEEEEEETTE---EEEEEECCCCGGGC---
T ss_pred H---HHHHHHhhccC---CccceEEEeeeeeEecc
Confidence 1 22222222222 34566778888999974
No 45
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.32 E-value=1.3e-12 Score=120.48 Aligned_cols=51 Identities=24% Similarity=0.313 Sum_probs=46.3
Q ss_pred CHhH-HHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCC
Q 022852 2 SPAS-VRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV 55 (291)
Q Consensus 2 s~~E-~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~ 55 (291)
|++| .+++++|+++|+++|+++++|..+|++|+++|. .|.|+|.+|+|+|+
T Consensus 22 sg~e~~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~---~~~i~l~aH~D~v~ 73 (353)
T 1y0y_A 22 SGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIAHKKGE---GPKVMIAAHMDQIG 73 (353)
T ss_dssp TTCGGGTHHHHHHHHHGGGSSEEEECTTCCEEEEECCS---SCEEEEEEECCBCE
T ss_pred CccchHHHHHHHHHHHHhhCCeEEEcCCCCEEEEecCC---CccEEEEeccCccc
Confidence 6778 899999999999999999999999999998764 38999999999995
No 46
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.30 E-value=3.9e-12 Score=120.05 Aligned_cols=101 Identities=24% Similarity=0.342 Sum_probs=81.3
Q ss_pred HHHHHHHHHH---H--cCCeEEEcc-----cccEEEEEeCCCC---CCCEEEEcccCCCCCCC-CCCCcHHHHHHHHHHH
Q 022852 8 AGNLIRQWME---D--AGLRTWVDH-----LGNVHGRVEGLNA---SAQALLIGSHLDTVVDA-GIFDGSLGIITAISAL 73 (291)
Q Consensus 8 ~~~~i~~~l~---~--~G~~v~~d~-----~gnv~a~~~g~~~---~~~~l~l~sH~DtV~~~-g~~D~~~gv~a~l~a~ 73 (291)
.+++|.++|+ + .+++++.+. ..||+++++|..+ ..+.|++++|+|+|+.+ |+.|+++|++++|+++
T Consensus 173 ~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~ 252 (421)
T 2ek8_A 173 EGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELA 252 (421)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHH
Confidence 4567888883 2 233444443 5799999998532 45789999999999988 9999999999999999
Q ss_pred HHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhccCc
Q 022852 74 KVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (291)
Q Consensus 74 ~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (291)
+.|++. +++++|+|+++.+||. ++.||+.++..+.
T Consensus 253 ~~l~~~----~~~~~i~~~~~~~EE~-----g~~Gs~~~~~~~~ 287 (421)
T 2ek8_A 253 RVMSKL----KTDTELRFITFGAEEN-----GLIGSKKYAASLS 287 (421)
T ss_dssp HHHTTS----CCSSEEEEEEESSSTT-----TSHHHHHHHTTCC
T ss_pred HHHhcc----CCCceEEEEEECCccc-----cchhHHHHHHhCc
Confidence 999874 5679999999999998 4679999987654
No 47
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.23 E-value=1.1e-11 Score=113.77 Aligned_cols=93 Identities=23% Similarity=0.268 Sum_probs=79.1
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCC----------------CC--------
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV----------------DA-------- 57 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~----------------~~-------- 57 (291)
|++|.+++++|+++|+++|++++.|..+|++++++|. +.|.|+|.||+|||+ .+
T Consensus 19 sg~e~~~~~~l~~~l~~~g~~v~~d~~gnlia~~~g~--~~~~vll~aH~DtV~~~v~~i~~~G~~~~~~~Gg~~~~~~~ 96 (348)
T 1ylo_A 19 ASSEQEVRQILLEEAARLQKEVRFDGLGSVLIRLNES--TGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQ 96 (348)
T ss_dssp TTBCHHHHHHHHHHHHHTTCCEEECTTCCEEEECCCC--SSCEEEEEEECCCCEEEEEEECTTCCEEEEEESCCCGGGSS
T ss_pred CCchHHHHHHHHHHHHhhCCEEEEecCCCEEEEecCC--CCceEEEEEcCCccceEEEEECCCCeEEEEecCCcchhhcc
Confidence 6789999999999999999999999999999998764 347899999999995 00
Q ss_pred -------------------------------------------------C--------------------CCCcHHHHHH
Q 022852 58 -------------------------------------------------G--------------------IFDGSLGIIT 68 (291)
Q Consensus 58 -------------------------------------------------g--------------------~~D~~~gv~a 68 (291)
| +.|++.|+++
T Consensus 97 g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~~~~D~k~g~aa 176 (348)
T 1ylo_A 97 LQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLSCYL 176 (348)
T ss_dssp SEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEecCcccHHHHHH
Confidence 0 2688999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCEEEEEecCCCCc
Q 022852 69 AISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (291)
Q Consensus 69 ~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~ 100 (291)
++++++.|++. .++.++.++|+.+||.+
T Consensus 177 ~l~al~~l~~~----~~~~~~~~~~t~~EEvG 204 (348)
T 1ylo_A 177 LVTLLRELHDA----ELPAEVWLVASSSEEVG 204 (348)
T ss_dssp HHHHHHHHTTC----CCSSEEEEEEESCCTTS
T ss_pred HHHHHHHhhhc----CCCceEEEEEEcccccc
Confidence 99999998754 35689999999999984
No 48
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.23 E-value=1.4e-11 Score=112.96 Aligned_cols=102 Identities=21% Similarity=0.128 Sum_probs=83.1
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCCC---------------CC--------
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD---------------AG-------- 58 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~---------------~g-------- 58 (291)
|++|.+++++|+++|+++|+++++|..+|++++++|.+ .|.|+|.||+|||+. +|
T Consensus 21 sg~e~~~~~~l~~~l~~~g~~~~~d~~gnlia~~~g~~--~~~i~l~aH~DtV~~~v~~i~~G~l~~~~~Gg~~~~~~~g 98 (346)
T 1vho_A 21 SGYETNVVSYIKSVIEPFVDEAKTTRHGSLIGYKKGKG--IGKLAFFAHVDEIGFVVSKVEGQFARLEPVGGVDPKVVYA 98 (346)
T ss_dssp TTCCHHHHHHHHHHHGGGCSEEEECTTSCEEEEECCSS--SCEEEEEEECCBCCEEEEEEETTEEEEEEC--------CC
T ss_pred CcchHHHHHHHHHHHHhhCCEEEEecCCcEEEEEcCCC--CceEEEEecCcccceEeEEecCCeEEEEEeCCccCccccc
Confidence 67899999999999999999999999999999997642 488999999999941 10
Q ss_pred -----------------------------------------------------------------------CCCcHHHHH
Q 022852 59 -----------------------------------------------------------------------IFDGSLGII 67 (291)
Q Consensus 59 -----------------------------------------------------------------------~~D~~~gv~ 67 (291)
+.|++.|++
T Consensus 99 ~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~~i~g~~~D~r~g~a 178 (346)
T 1vho_A 99 SKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNGKVVGKALDNRASCG 178 (346)
T ss_dssp CEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETTEEEETTHHHHHHHH
T ss_pred CEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhhhcCeEEeccCccHHHHH
Confidence 267889999
Q ss_pred HHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhc
Q 022852 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (291)
Q Consensus 68 a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~ 114 (291)
+++.+++.|++. .+++++.++|+.+||.+ +.|++..+.
T Consensus 179 a~l~al~~l~~~----~~~~~~~~~~t~~EEvG-----~~Ga~~~~~ 216 (346)
T 1vho_A 179 VLVKVLEFLKRY----DHPWDVYVVFSVQEETG-----CLGALTGAY 216 (346)
T ss_dssp HHHHHHHHHTTC----CCSSEEEEEEECTTSSS-----HHHHHHTTC
T ss_pred HHHHHHHHhhhc----CCCceEEEEEECCcccc-----hhhHHHHhc
Confidence 999999998764 35579999999999984 346654433
No 49
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.15 E-value=3.5e-11 Score=111.03 Aligned_cols=54 Identities=22% Similarity=0.250 Sum_probs=49.3
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCC
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV 55 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~ 55 (291)
|+.|.++++||+++|+++|+++++|..||++++++|..++.|.|+|.+|||+|+
T Consensus 19 SG~E~~v~~~l~~~l~~~g~~~~~D~~GNli~~~~g~~~~~~~v~l~aHmD~Vg 72 (355)
T 3kl9_A 19 SGHEAPVRAYLREKLTPHVDEVVTDGLGGIFGIKHSEAVDAPRVLVASHMDEVG 72 (355)
T ss_dssp TTCCHHHHHHHHHHHGGGSSEEEECTTSCEEEEECCCSTTCCEEEEEEECCBCE
T ss_pred CCCHHHHHHHHHHHHHHhCCEEEECCCCeEEEEECCcCCCCCeEEEEecccccc
Confidence 789999999999999999999999999999999987542468999999999996
No 50
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.14 E-value=3.8e-11 Score=114.06 Aligned_cols=83 Identities=28% Similarity=0.390 Sum_probs=72.6
Q ss_pred cccEEEEEeCCCCCCCEEEEcccCCCCCCC-CCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCc
Q 022852 28 LGNVHGRVEGLNASAQALLIGSHLDTVVDA-GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTF 106 (291)
Q Consensus 28 ~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~-g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~ 106 (291)
..||+++++|..+..+.|++++|+|+|+.+ |+.|+++|++++|++++.|++.+. +++++|+|+|+.+||. ++
T Consensus 235 ~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~--~~~~~i~f~~~~~EE~-----gl 307 (444)
T 3iib_A 235 SYNVIAEVKGSTKADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQ--KPERTIRVVLYAAEEL-----GL 307 (444)
T ss_dssp EEEEEEEECCSTEEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSS--CCSEEEEEEEESCGGG-----TS
T ss_pred eEEEEEEEeCCCCCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCC--CCCCeEEEEEECCccc-----CC
Confidence 469999999875335789999999999986 999999999999999999999876 7899999999999998 45
Q ss_pred ccchhhhccCc
Q 022852 107 LGSAALAGILP 117 (291)
Q Consensus 107 ~Gs~~~~~~~~ 117 (291)
.||+.++.++.
T Consensus 308 ~Gs~~~~~~~~ 318 (444)
T 3iib_A 308 LGGKTYAKEHE 318 (444)
T ss_dssp HHHHHHHHHTG
T ss_pred cCHHHHHHhhH
Confidence 79998876553
No 51
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.02 E-value=5e-11 Score=108.54 Aligned_cols=49 Identities=14% Similarity=0.114 Sum_probs=44.4
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEcc-------cccEEEEEeCCCCCCCEEEEcccCCCC
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDH-------LGNVHGRVEGLNASAQALLIGSHLDTV 54 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~-------~gnv~a~~~g~~~~~~~l~l~sH~DtV 54 (291)
|++|.+++++|+++|+++|+++++|. .+|++++++| + |.|+|.+|||||
T Consensus 33 sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g---~-~~ill~aH~DtV 88 (321)
T 3cpx_A 33 SGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG---N-PRTAVFAHMDSI 88 (321)
T ss_dssp TTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES---S-CSEEEEEECCBC
T ss_pred CCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC---C-ceEEEEecCCcC
Confidence 67899999999999999999887787 8999999876 3 789999999999
No 52
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=98.93 E-value=6.2e-10 Score=102.59 Aligned_cols=51 Identities=20% Similarity=0.352 Sum_probs=47.4
Q ss_pred CHhHH-HHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCC
Q 022852 2 SPASV-RAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV 55 (291)
Q Consensus 2 s~~E~-~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~ 55 (291)
|+.|. +++++|+++|+++|+++++|..||++++++|. .|.|+|.+|||+|+
T Consensus 25 SG~E~~~v~~~l~~~l~~~g~~~~~D~~GNvi~~~~g~---~~~v~l~aHmDtVg 76 (354)
T 2vpu_A 25 SGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGS---SPRIMVAAHMDKIG 76 (354)
T ss_dssp TTCGGGTHHHHHHHHHHTTCSEEEECTTCCEEEEECCS---SSEEEEECCCCBCE
T ss_pred CcccHHHHHHHHHHHHHHhCCEEEEcCCCeEEEEEcCC---CCEEEEEecccccc
Confidence 78899 99999999999999999999999999999774 28999999999997
No 53
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.88 E-value=2.4e-09 Score=106.63 Aligned_cols=83 Identities=22% Similarity=0.292 Sum_probs=70.3
Q ss_pred ccccEEEEEeCCCCCCCEEEEcccCCCCCCCCCCCcHHHHHHHHHHHHHHHH---cCCCCCCCCCEEEEEecCCCCcccC
Q 022852 27 HLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKS---TGKLGKLKRPVEVIAFSDEEGVRFQ 103 (291)
Q Consensus 27 ~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~g~~D~~~gv~a~l~a~~~L~~---~~~~~~~~~~i~~v~~~dEE~~~~~ 103 (291)
...||+|+++|.....+.|++++|+|+|+.| +.|+.+|++++|++++.|.+ .+. +++++|+|+++.+||.
T Consensus 311 ~~~NVi~~i~G~~~~~~~vllgaH~Ds~~~G-a~D~~sG~a~lLe~ar~l~~~~~~g~--~p~r~I~f~~~~~EE~---- 383 (707)
T 3fed_A 311 RIYNVVGTIRGSVEPDRYVILGGHRDSWVFG-AIDPTSGVAVLQEIARSFGKLMSKGW--RPRRTIIFASWDAEEF---- 383 (707)
T ss_dssp EEEEEEEEECCSSEEEEEEEEEEECCCSSSC-TTTTHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEEEEESCGGG----
T ss_pred EEEEEEEEEeCCCCCCceEEEeccccCCCCC-CccCcHHHHHHHHHHHHHHhhhhccC--CCCCCEEEEEeCCccc----
Confidence 3579999999875335789999999999875 68999999999999999976 455 7899999999999998
Q ss_pred CCcccchhhhccCc
Q 022852 104 STFLGSAALAGILP 117 (291)
Q Consensus 104 ~~~~Gs~~~~~~~~ 117 (291)
++.||+.++....
T Consensus 384 -Gl~GS~~~~~~~~ 396 (707)
T 3fed_A 384 -GLLGSTEWAEENV 396 (707)
T ss_dssp -TSHHHHHHHHHHH
T ss_pred -cchhHHHHHHhcc
Confidence 4689999887543
No 54
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.78 E-value=7.1e-09 Score=95.01 Aligned_cols=52 Identities=19% Similarity=0.221 Sum_probs=47.2
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeEEEcccccEEEEEeCCCCCCCEEEEcccCCCCC
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV 55 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v~~d~~gnv~a~~~g~~~~~~~l~l~sH~DtV~ 55 (291)
.|+.|.+++++++++|+++|.++++|..||++++. |. +.|.|+|.+|||+|.
T Consensus 26 pSG~E~~v~~~i~~~l~~~~~e~~~D~~Gnvi~~~-g~--~~~~v~l~aHmDevG 77 (343)
T 3isx_A 26 PSGREEEVRSIILEELEGHIDGHRIDGLGNLIVWK-GS--GEKKVILDAHIDEIG 77 (343)
T ss_dssp BTTCCHHHHHHHHHHHTTTCSEEEECTTCCEEEEE-CC--CSSEEEEEEECCBCE
T ss_pred CCCchHHHHHHHHHHHHHhCCEEEECCCCCEEEEE-CC--CCCEEEEEecccccc
Confidence 37899999999999999999999999999999998 43 468999999999995
No 55
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.78 E-value=7.5e-09 Score=102.07 Aligned_cols=82 Identities=13% Similarity=0.233 Sum_probs=69.2
Q ss_pred ccccEEEEEeCCCCCCCEEEEcccCCCCCCCCCCCcHHHHHHHHHHHHHHHHc----CCCCCCCCCEEEEEecCCCCccc
Q 022852 27 HLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKST----GKLGKLKRPVEVIAFSDEEGVRF 102 (291)
Q Consensus 27 ~~gnv~a~~~g~~~~~~~l~l~sH~DtV~~~g~~D~~~gv~a~l~a~~~L~~~----~~~~~~~~~i~~v~~~dEE~~~~ 102 (291)
...||+|+++|.....+.|++++|+|+|.+ |+.|+.+|++++|++++.|++. +. +++++|+|+++.+||.
T Consensus 265 ~~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~-Ga~D~~sG~a~lLe~ar~l~~~~~~~g~--~p~r~I~f~~~~~EE~--- 338 (640)
T 3kas_A 265 KILNIFGVIKGFVEPDHYVVVGAQRDAWGP-GAAKSGVGTALLLKLAQMFSDMVLKDGF--QPSRSIIFASWSAGDF--- 338 (640)
T ss_dssp EEEEEEEEECCSSEEEEEEEEEEECCCSSC-CTTTTHHHHHHHHHHHHHHHHHHHTSCC--CCSEEEEEEEESSGGG---
T ss_pred eEEEEEEEEeCCcCCCCceeeecccCCCCC-CCCcCcHHHHHHHHHHHHHHHhhhhcCC--CCCCcEEEEEECCccc---
Confidence 357999999987323478999999999954 6889999999999999999864 55 7899999999999998
Q ss_pred CCCcccchhhhccC
Q 022852 103 QSTFLGSAALAGIL 116 (291)
Q Consensus 103 ~~~~~Gs~~~~~~~ 116 (291)
++.||+.++...
T Consensus 339 --gl~GS~~~~~~~ 350 (640)
T 3kas_A 339 --GSVGATEWLEGY 350 (640)
T ss_dssp --TSHHHHHHHHHT
T ss_pred --CchhHHHHHHhh
Confidence 468999887754
No 56
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=96.76 E-value=0.0022 Score=59.61 Aligned_cols=64 Identities=17% Similarity=0.126 Sum_probs=52.1
Q ss_pred EeCCCCCCCEEEEcccCCCCCCCCCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCcccCCCcccchhhhc
Q 022852 35 VEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (291)
Q Consensus 35 ~~g~~~~~~~l~l~sH~DtV~~~g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~~~~~~~~Gs~~~~~ 114 (291)
++|. ..+.|++.+|+|+ ++++.|+.+|++.+++.+++|++. +++.+++|+|++ |. .||..+..
T Consensus 174 ipG~--t~~~IllsaH~cH--P~~ANDNaSG~a~lleLar~l~~~----~~~~t~rFvf~p-g~--------iGS~~yl~ 236 (435)
T 3k9t_A 174 IRGE--LEEEILLTTYTCH--PSMCNDNLSGVALITFIAKALSKL----KTKYSYRFLFAP-ET--------IGSITWLS 236 (435)
T ss_dssp ECCS--SSCEEEEEEECCC--CSCTTTTHHHHHHHHHHHHHHTTS----CCSSEEEEEEEC-TT--------HHHHHHHH
T ss_pred ecCC--CCCEEEEEEEcCC--CCCCCccchHHHHHHHHHHHHhcC----CCCceEEEEEcC-cc--------HHHHHHHH
Confidence 4774 3489999999997 457999999999999999999864 578999999998 22 38887754
Q ss_pred c
Q 022852 115 I 115 (291)
Q Consensus 115 ~ 115 (291)
+
T Consensus 237 ~ 237 (435)
T 3k9t_A 237 R 237 (435)
T ss_dssp H
T ss_pred h
Confidence 3
No 57
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=93.14 E-value=0.031 Score=52.31 Aligned_cols=53 Identities=25% Similarity=0.334 Sum_probs=41.4
Q ss_pred CHhHHHHHHHHHHHHHHcCC---------------eEEEccc-ccEEEEEeCCC--CCCCEEEEcccCCCC
Q 022852 2 SPASVRAGNLIRQWMEDAGL---------------RTWVDHL-GNVHGRVEGLN--ASAQALLIGSHLDTV 54 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~---------------~v~~d~~-gnv~a~~~g~~--~~~~~l~l~sH~DtV 54 (291)
|+.++.+.++++++|++.|| ++.++.. +|++|...|.. ...+.+++.+|+|++
T Consensus 15 ~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dsp 85 (428)
T 2ijz_A 15 SPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSP 85 (428)
T ss_dssp THHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCS
T ss_pred CCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcC
Confidence 57789999999999999998 3445566 78999887743 124689999999987
No 58
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=92.26 E-value=0.088 Score=49.69 Aligned_cols=52 Identities=13% Similarity=0.049 Sum_probs=39.5
Q ss_pred CHhHHHHHHHHHHHHHHcCCe-------------EEEcccccEEEEEe-CCCC--CCCEEEEcccCCCC
Q 022852 2 SPASVRAGNLIRQWMEDAGLR-------------TWVDHLGNVHGRVE-GLNA--SAQALLIGSHLDTV 54 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~-------------v~~d~~gnv~a~~~-g~~~--~~~~l~l~sH~DtV 54 (291)
|+.++.+.++++++|++.||. +.++..+|+++.+. |.++ .... ++.+|+|+.
T Consensus 32 spT~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~r~g~~i~a~~~G~~~~~~g~~-ii~AH~Dsp 99 (458)
T 1y7e_A 32 FKTEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYTCREKSVAFAIIGKNPIEDGMN-FIVSHTDSP 99 (458)
T ss_dssp CCSHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECBCSSSCBCCEECCSSCGGGCCE-ECCCBCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCcccccccccCCCCeEEEECCCCEEEEEEeCCCCCCCCcE-EEEEccCcC
Confidence 456889999999999999975 66677788666654 5432 2344 899999987
No 59
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=89.44 E-value=0.38 Score=45.22 Aligned_cols=53 Identities=9% Similarity=0.103 Sum_probs=40.0
Q ss_pred CHhHHHHHHHHHHHHHHcCCeE-------------EEccc-ccEEEEEeCCCCCCCEEEEcccCCCC
Q 022852 2 SPASVRAGNLIRQWMEDAGLRT-------------WVDHL-GNVHGRVEGLNASAQALLIGSHLDTV 54 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v-------------~~d~~-gnv~a~~~g~~~~~~~l~l~sH~DtV 54 (291)
|+.++.+.++++++|++.||.- .++.. +|++|...|.....+.+++.+|+|.+
T Consensus 30 s~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp 96 (450)
T 2glf_A 30 AKTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSP 96 (450)
T ss_dssp CSSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccC
Confidence 4568999999999999999842 23333 58999876642223689999999987
No 60
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=80.50 E-value=0.27 Score=46.38 Aligned_cols=52 Identities=15% Similarity=0.245 Sum_probs=35.9
Q ss_pred HhHHHHHHHHHHHHHHcCCe-----------------EEEccccc-EEEEEeCCCC-CCCEEEEcccCCCC
Q 022852 3 PASVRAGNLIRQWMEDAGLR-----------------TWVDHLGN-VHGRVEGLNA-SAQALLIGSHLDTV 54 (291)
Q Consensus 3 ~~E~~~~~~i~~~l~~~G~~-----------------v~~d~~gn-v~a~~~g~~~-~~~~l~l~sH~DtV 54 (291)
+.++.+.++++++|++.||+ +.++..+| ++|...|.++ ..+.+++.+|+|.+
T Consensus 35 pt~~hav~~~~~~l~~sGfe~l~e~~~~~w~l~~g~~~~~~~~g~slia~~~G~~~~~~g~~ii~AH~Dsp 105 (461)
T 2glj_A 35 KTERECVTELIKTAEKSGYRNIEDILAKGETLKEGDKVYANNRGKGLIMFLIGKEPLYTGFKILGAHIDSP 105 (461)
T ss_dssp HCCSSTHHHHHHHSCCSSCCCTTCCCSTTTTCCTTCCCEEEETTTEEEECCCCSSCGGGCCEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCChhHHHHhhHhhccCCCCEEEEEcCCCEEEEEEeCCcCccCCceEEEEecCcC
Confidence 34567788899999999986 12233466 8887666431 12359999999987
No 61
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=64.68 E-value=29 Score=32.90 Aligned_cols=87 Identities=9% Similarity=-0.017 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHcCCeEEE-cc-------c------------cc--EEEEEeCCCCCCCEEEEcccCCCCCCCCCC----
Q 022852 7 RAGNLIRQWMEDAGLRTWV-DH-------L------------GN--VHGRVEGLNASAQALLIGSHLDTVVDAGIF---- 60 (291)
Q Consensus 7 ~~~~~i~~~l~~~G~~v~~-d~-------~------------gn--v~a~~~g~~~~~~~l~l~sH~DtV~~~g~~---- 60 (291)
..++++.+.++++|+++++ +. + .. +.-.|.|..+..+.|.|.|.==| +..|+.
T Consensus 225 ~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~~~iaLVGKGIT-FDSGGlsLKp 303 (522)
T 4efd_A 225 TFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPVKKVSLVGKGIV-YDCGGLALKP 303 (522)
T ss_dssp HHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCSEEEEEEEEEEE-TCCCCSSSCH
T ss_pred HHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCCCcEEEecCceE-eecCCccCCC
Confidence 3466777888888998875 21 1 11 44556554433467777765211 222433
Q ss_pred ---------CcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCC
Q 022852 61 ---------DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (291)
Q Consensus 61 ---------D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~ 99 (291)
|| +|-++.+++++++.+.+ ++.+|..+.-..|--
T Consensus 304 ~~~M~~MK~DM-gGAAaVlga~~a~a~l~----lpvnV~~vl~~~ENm 346 (522)
T 4efd_A 304 ADYMKLMKHDM-GGAAAVFCGFLTAVRLQ----QPVQLSCTLCLAENA 346 (522)
T ss_dssp HHHHHHGGGTT-HHHHHHHHHHHHHHHHT----CSEEEEEEEEEEECC
T ss_pred ccchhhccccc-chHHHHHHHHHHHHHcC----CCceEEEEEEEeccC
Confidence 44 56677788888888874 567888877777764
No 62
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=64.39 E-value=19 Score=34.11 Aligned_cols=86 Identities=14% Similarity=0.112 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHcCCeEEEcc--------c-------------cc-EEEEEeCCCCCCCEEEEcccCCCCCCCCC------
Q 022852 8 AGNLIRQWMEDAGLRTWVDH--------L-------------GN-VHGRVEGLNASAQALLIGSHLDTVVDAGI------ 59 (291)
Q Consensus 8 ~~~~i~~~l~~~G~~v~~d~--------~-------------gn-v~a~~~g~~~~~~~l~l~sH~DtV~~~g~------ 59 (291)
.++++.+.+++.|++|++-. + +- +.-+|.|..+..++|.|.|.==| +..|+
T Consensus 219 ~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiT-FDsGG~slKp~ 297 (515)
T 3kzw_A 219 FAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDEAPIALVGKGIT-YDSGGYSIKTK 297 (515)
T ss_dssp HHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSSCCCEEEEEEEEE-EECCTTSCCCH
T ss_pred HHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCCCCcEEEecCceE-EecCCcCCCCc
Confidence 45667777778899887521 1 11 45556665444566777654211 11133
Q ss_pred -------CCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCC
Q 022852 60 -------FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (291)
Q Consensus 60 -------~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~ 99 (291)
.|| +|-++.+++++++.+.+ ++.+|..+.-..|--
T Consensus 298 ~~M~~MK~DM-~GAAaVlg~~~a~a~l~----lpvnv~~~i~~~ENm 339 (515)
T 3kzw_A 298 NGMATMKFDM-CGAANVVGIIEAASRLQ----LPVNIVGVLACAENM 339 (515)
T ss_dssp HHHTTGGGGG-HHHHHHHHHHHHHHHTT----CSCEEEEEEEEEEEC
T ss_pred cChhhchhch-HHHHHHHHHHHHHHHcC----CCceEEEEEEeeccC
Confidence 244 66677889999999885 567888777777664
No 63
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=51.35 E-value=1.2e+02 Score=28.64 Aligned_cols=87 Identities=14% Similarity=0.170 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHc-CCeEEEcc--------c------------cc--EEEEEeCCCCCCCEEEEccc---CCC-----CCC
Q 022852 8 AGNLIRQWMEDA-GLRTWVDH--------L------------GN--VHGRVEGLNASAQALLIGSH---LDT-----VVD 56 (291)
Q Consensus 8 ~~~~i~~~l~~~-G~~v~~d~--------~------------gn--v~a~~~g~~~~~~~l~l~sH---~Dt-----V~~ 56 (291)
.+++..+.++++ |++|++-. + .. +.-+|.|..+..++|.|.|. +|| -|.
T Consensus 202 ~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiTFDsGG~slKp~ 281 (497)
T 3h8g_F 202 LAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKKADKPFVLVGKGITFDTGGISLKPG 281 (497)
T ss_dssp HHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSCTTSCCEEEEEEEEEEECCTTSCCCS
T ss_pred HHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCCCCCCcEEEEcCceEeccCCccCCCc
Confidence 466777888888 99887521 1 11 45566664444566777754 233 122
Q ss_pred CCC----CCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCC
Q 022852 57 AGI----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (291)
Q Consensus 57 ~g~----~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~ 99 (291)
++= .|| +|-++.+++++++.+.+ ++.+|+.+.-..|--
T Consensus 282 ~~M~~Mk~DM-~GAAaV~g~~~a~a~l~----l~vnv~~~i~~~ENm 323 (497)
T 3h8g_F 282 AGMDEMKYDM-CGAASVFGTLRAVLELQ----LPVNLVCLLACAENM 323 (497)
T ss_dssp TTGGGGGGTT-HHHHHHHHHHHHHHHHT----CSSEEEEEEEEEEEC
T ss_pred cchhhccccc-hHHHHHHHHHHHHHHcC----CCeEEEEEEEeeccC
Confidence 221 344 66677889999998885 567888887777764
No 64
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=43.48 E-value=1.7e+02 Score=27.46 Aligned_cols=89 Identities=13% Similarity=0.103 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHcC--CeEEEcc--------c------------cc--EEEEEeCCCC-CCCEEEEccc---CCC-----
Q 022852 7 RAGNLIRQWMEDAG--LRTWVDH--------L------------GN--VHGRVEGLNA-SAQALLIGSH---LDT----- 53 (291)
Q Consensus 7 ~~~~~i~~~l~~~G--~~v~~d~--------~------------gn--v~a~~~g~~~-~~~~l~l~sH---~Dt----- 53 (291)
..+++.++.++++| ++|++-. + .. |.-+|.|..+ ..++|.|.|. +||
T Consensus 202 ~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~~~~~~~i~LVGKGITFDsGGisl 281 (503)
T 1gyt_A 202 YLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISI 281 (503)
T ss_dssp HHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCCCTTCCCEEEEEEEEEEECCTTSC
T ss_pred HHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCCCCCCCcEEEEcCceEecCCCccc
Confidence 34667777788889 8887521 1 11 4556666432 2456777654 232
Q ss_pred CCCCCCCCcH---HHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCC
Q 022852 54 VVDAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (291)
Q Consensus 54 V~~~g~~D~~---~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~ 99 (291)
=|.++=.+|| +|-++.+++++++.+.+ ++.+|+.+.-..|--
T Consensus 282 Kp~~~M~~MK~DM~GAAaVlg~~~aia~l~----l~vnV~~~i~~~ENm 326 (503)
T 1gyt_A 282 KPSEGMDEMKYDMCGAAAVYGVMRMVAELQ----LPINVIGVLAGCENM 326 (503)
T ss_dssp CCSTTGGGGGGGGHHHHHHHHHHHHHHHHT----CSSEEEEEEEEEEEC
T ss_pred cCCcChhhcccccchHHHHHHHHHHHHHcC----CCeeEEEEEEeeccC
Confidence 1222212232 66677889999998885 567888887777764
No 65
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=42.30 E-value=20 Score=32.81 Aligned_cols=27 Identities=26% Similarity=0.341 Sum_probs=23.1
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEccc
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDHL 28 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~~ 28 (291)
|..+.++++||+++|+++|++++.+..
T Consensus 34 s~g~~~a~~yi~~~~~~~Gl~~~~q~~ 60 (421)
T 2ek8_A 34 SPEELKAVRYIEQQFKSYGYHVEVQPF 60 (421)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHCCCceEEEEE
Confidence 567899999999999999998766543
No 66
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=41.93 E-value=2.1e+02 Score=27.13 Aligned_cols=89 Identities=9% Similarity=0.029 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHcCCeEEEcc--------c------------cc--EEEEEeCCCCCCCEEEEccc---CCC-----CCCC
Q 022852 8 AGNLIRQWMEDAGLRTWVDH--------L------------GN--VHGRVEGLNASAQALLIGSH---LDT-----VVDA 57 (291)
Q Consensus 8 ~~~~i~~~l~~~G~~v~~d~--------~------------gn--v~a~~~g~~~~~~~l~l~sH---~Dt-----V~~~ 57 (291)
.++...+..+++|+++++-. + .. +.-+|.|..+..++|.|.|. +|| -|..
T Consensus 227 lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~~~~iaLVGKGITFDsGG~slKp~~ 306 (528)
T 3kr4_A 227 LSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDVKKKIALVGKGITFDSGGYNLKAAP 306 (528)
T ss_dssp HHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCCCEEEEEEEEEEEEECCTTSCSCST
T ss_pred HHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCCCCcEEEecCceEeecCCcccCCCC
Confidence 35566677778899887521 1 11 45566665434467777754 233 2322
Q ss_pred CC--CCcH---HHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCC
Q 022852 58 GI--FDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (291)
Q Consensus 58 g~--~D~~---~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~ 99 (291)
|. ..|| +|-++.+++++++.+.+ ..+.+|..+.-..|--
T Consensus 307 g~~M~~MK~DM~GAAaVlg~~~aia~l~---~~~vnv~~vi~~~ENm 350 (528)
T 3kr4_A 307 GSMIDLMKFDMSGCAAVLGCAYCVGTLK---PENVEIHFLSAVCENM 350 (528)
T ss_dssp TCCGGGGGGGGHHHHHHHHHHHHHHHHC---CSSEEEEEEEEEEEEC
T ss_pred CcCHHHhhcCcchHHHHHHHHHHHHhcC---CCCceEEEEEEeeccC
Confidence 31 2233 56667788888888764 1245677776666654
No 67
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=41.35 E-value=1.2e+02 Score=28.47 Aligned_cols=87 Identities=16% Similarity=0.106 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHc-CCeEEEcc--------c-------------cc-EEEEEeCCCCCCCEEEEccc---CCC-----CCC
Q 022852 8 AGNLIRQWMEDA-GLRTWVDH--------L-------------GN-VHGRVEGLNASAQALLIGSH---LDT-----VVD 56 (291)
Q Consensus 8 ~~~~i~~~l~~~-G~~v~~d~--------~-------------gn-v~a~~~g~~~~~~~l~l~sH---~Dt-----V~~ 56 (291)
.+++.++.++++ |++|++-. + +- +.-+|.|.++..++|.|.|. +|| -|.
T Consensus 186 ~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~~i~LVGKGiTFDsGG~slKp~ 265 (486)
T 3pei_A 186 MLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNEGDAPIVLVGKGLVFDNGGICIKQA 265 (486)
T ss_dssp HHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCTTSCCEEEEEEEEETEECC------
T ss_pred HHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCCCCCcEEEEccceEEecCCcccCCc
Confidence 466777777778 88887521 1 11 45556664444566777754 232 111
Q ss_pred CC----CCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCC
Q 022852 57 AG----IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (291)
Q Consensus 57 ~g----~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~ 99 (291)
++ ..|| +|-++.+++++++.+.+ ++.+|+.+.-..|--
T Consensus 266 ~~M~~Mk~DM-~GAAaVlg~~~a~a~l~----l~vnv~~~i~~~ENm 307 (486)
T 3pei_A 266 AGMDSMKMDM-GGVAAVMGTMKAIAMLN----LPVNVVGVMGLAENA 307 (486)
T ss_dssp ------EECS-HHHHHHHHHHHHHHHHT----CSSEEEEEEEEEEC-
T ss_pred cchhhhhccc-hHHHHHHHHHHHHHHcC----CCcEEEEEEEeeccC
Confidence 11 1344 66677889999998885 567888887777764
No 68
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=40.19 E-value=22 Score=32.85 Aligned_cols=27 Identities=15% Similarity=0.186 Sum_probs=22.9
Q ss_pred CHhHHHHHHHHHHHHHHcCC-eEEEccc
Q 022852 2 SPASVRAGNLIRQWMEDAGL-RTWVDHL 28 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~-~v~~d~~ 28 (291)
|..+.++++|+.++|+++|+ +|+.+..
T Consensus 41 S~g~~~a~~~i~~~l~~~G~~~v~~q~f 68 (444)
T 3iib_A 41 SEQDKVAVDWAIAKLQSLGFDRVYKEPV 68 (444)
T ss_dssp SHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHcCCCceEeeeE
Confidence 67899999999999999999 6765543
No 69
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=39.42 E-value=11 Score=35.21 Aligned_cols=38 Identities=21% Similarity=0.114 Sum_probs=29.6
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCc
Q 022852 57 AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (291)
Q Consensus 57 ~g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~ 100 (291)
+.+.|++.++.++|.+++.++ .++.++.++++.-||.|
T Consensus 257 s~~lDdr~~~~~~l~al~~~~------~~~~~~~~~~~d~EEVG 294 (461)
T 2glj_A 257 GYGQDDRICAYTSFEAMLEMK------NAKKTCITILVDKEEVG 294 (461)
T ss_dssp ETTHHHHHHHHHHHHHHHTCC------SCSSCEEEEEECCGGGT
T ss_pred EecchhHHHHHHHHHHHHhhc------cCCCeEEEEEEccCCCC
Confidence 345688999998888876442 35678999999999984
No 70
>2zvy_A Chemotaxis protein MOTB; 2-layer sandwich, bacterial flagellum, cell inner membrane, cell membrane, flagellar rotation, membrane; 1.75A {Salmonella typhimurium} PDB: 2zvz_A
Probab=39.28 E-value=64 Score=25.88 Aligned_cols=52 Identities=17% Similarity=0.156 Sum_probs=37.2
Q ss_pred EEEEcccCCCCCCCC----CCCcHHHHHHHHHHHHHHHHcCCCCCCCCCE-EEEEecCCC
Q 022852 44 ALLIGSHLDTVVDAG----IFDGSLGIITAISALKVLKSTGKLGKLKRPV-EVIAFSDEE 98 (291)
Q Consensus 44 ~l~l~sH~DtV~~~g----~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i-~~v~~~dEE 98 (291)
.|.+.||.|.++... .+....+..=|..+.++|.+.|+ . ...| .+.+..+..
T Consensus 92 ~I~I~GHTD~~g~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gi--~-~~ri~~~~G~G~~~ 148 (183)
T 2zvy_A 92 RISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGL--D-NGKVLRVVGMAATM 148 (183)
T ss_dssp CEEEEEECCSSCTTCSTTSSCHHHHHHHHHHHHHHHHHHTTC--C-TTCEEEEEECTTTT
T ss_pred eEEEEEEeCCCCCccccccccHHHHHHHHHHHHHHHHHHcCC--C-HHHhheeEEecccC
Confidence 689999999998732 24556777777888899988886 3 4456 566665444
No 71
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=38.37 E-value=2.4e+02 Score=26.39 Aligned_cols=87 Identities=17% Similarity=0.135 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHcC--CeEEEcc--------c------------cc--EEEEEeCCC-CCCCEEEEccc---CCC-----C
Q 022852 8 AGNLIRQWMEDAG--LRTWVDH--------L------------GN--VHGRVEGLN-ASAQALLIGSH---LDT-----V 54 (291)
Q Consensus 8 ~~~~i~~~l~~~G--~~v~~d~--------~------------gn--v~a~~~g~~-~~~~~l~l~sH---~Dt-----V 54 (291)
.+++..+.++++| ++|++-. + .. +.-+|.|.. +..++|.|.|. +|| =
T Consensus 183 lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~~~~~i~LVGKGITFDsGG~slK 262 (484)
T 1lam_A 183 FAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSPNASEPPLVFVGKGITFDSGGISIK 262 (484)
T ss_dssp HHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSSSTTSCCEEEEECEEEEECCTTSCC
T ss_pred HHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEECCCCCCCCCcEEEEecceEEcCCCcCCc
Confidence 4667777788889 8877521 1 11 445565543 22344666654 222 1
Q ss_pred CCCCC----CCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCC
Q 022852 55 VDAGI----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (291)
Q Consensus 55 ~~~g~----~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~ 99 (291)
|..+= .|| +|-++.+++++++.+.+ ++.+|+.+.-..|--
T Consensus 263 p~~~M~~MK~DM-gGAAaVlg~~~aia~l~----l~vnv~~~i~~~ENm 306 (484)
T 1lam_A 263 AAANMDLMRADM-GGAATICSAIVSAAKLD----LPINIVGLAPLCENM 306 (484)
T ss_dssp CSTTGGGGGGTT-HHHHHHHHHHHHHHHTT----CSSEEEEEEEEEEEC
T ss_pred Cccchhhhhccc-hHHHHHHHHHHHHHHcC----CCeeEEEEEEeeccC
Confidence 22221 244 66677889999999875 567888877777664
No 72
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=32.41 E-value=2.8e+02 Score=25.99 Aligned_cols=86 Identities=16% Similarity=0.179 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHc-CCeEEEcc--------c-------------cc-EEEEEeCCCCCCCEEEEccc---CCC-----CCC
Q 022852 8 AGNLIRQWMEDA-GLRTWVDH--------L-------------GN-VHGRVEGLNASAQALLIGSH---LDT-----VVD 56 (291)
Q Consensus 8 ~~~~i~~~l~~~-G~~v~~d~--------~-------------gn-v~a~~~g~~~~~~~l~l~sH---~Dt-----V~~ 56 (291)
.+++..+.++++ |++|++-. + +- +.-+|.|.. ..++|.|.|. +|| -|.
T Consensus 198 ~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~-~~~~i~LVGKGiTFDsGG~slKp~ 276 (490)
T 3jru_B 198 LADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGG-DARPYVLVGKGITFDTGGVNLKTQ 276 (490)
T ss_dssp HHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTT-TSCCEEEEECEEEEECCTTSCCCS
T ss_pred HHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCC-CCCcEEEEcCeeEecCCCccCCCc
Confidence 456666767676 88876521 1 11 455566644 3456666654 232 122
Q ss_pred CCC----CCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCC
Q 022852 57 AGI----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (291)
Q Consensus 57 ~g~----~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~ 99 (291)
++= .|| +|-++.+++++++.+.+ ++.+|+.+.-..|--
T Consensus 277 ~~M~~Mk~DM-~GAAaV~g~~~a~a~l~----l~vnv~~~i~~~ENm 318 (490)
T 3jru_B 277 GGIEEMKYDM-CGGATVIGTFVATVKAE----LPINLVVVVPAVENA 318 (490)
T ss_dssp SCGGGGGGGG-HHHHHHHHHHHHHHHTT----CSSEEEEEEEEEEEC
T ss_pred ccHhhCcccc-hHHHHHHHHHHHHHHcC----CCcEEEEEEEeeccC
Confidence 221 234 66677889999999885 567888877777664
No 73
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=31.56 E-value=73 Score=30.57 Aligned_cols=53 Identities=21% Similarity=0.282 Sum_probs=34.4
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEE--Ecc----c----------ccEEEEEeCCC--CCCC-EEEEcccCCCC
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTW--VDH----L----------GNVHGRVEGLN--ASAQ-ALLIGSHLDTV 54 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~--~d~----~----------gnv~a~~~g~~--~~~~-~l~l~sH~DtV 54 (291)
|+.++.+.+.++++|++.||.-- .+. . ..++|..-|.. +... --++++|.|.-
T Consensus 20 spT~~HaV~~~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~IvgAHtDSP 91 (571)
T 4eme_A 20 SGSNFLACKNLKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILISIGHIDSC 91 (571)
T ss_dssp CCSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEEEEEeccCC
Confidence 45689999999999999999531 110 1 12566544543 2223 46788999973
No 74
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=30.64 E-value=3.4e+02 Score=25.40 Aligned_cols=88 Identities=14% Similarity=0.054 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHcCCeEEEc-c-------c------------cc--EEEEEeCCCCCCCEEEEccc---CCC-----CCC
Q 022852 7 RAGNLIRQWMEDAGLRTWVD-H-------L------------GN--VHGRVEGLNASAQALLIGSH---LDT-----VVD 56 (291)
Q Consensus 7 ~~~~~i~~~l~~~G~~v~~d-~-------~------------gn--v~a~~~g~~~~~~~l~l~sH---~Dt-----V~~ 56 (291)
..++++.+.+++.|+++++- . + .. +.-.|.|..+ .++|.|.|. +|| -|.
T Consensus 188 ~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~~~~~-~~~i~LVGKGiTFDsGG~slKp~ 266 (491)
T 2hc9_A 188 ALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHEVPGS-TEHIALVGKGVVYDTGGLQIKTK 266 (491)
T ss_dssp HHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCTTC-SCEEEEEEEEEEEECCTTSCCCT
T ss_pred HHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeCCCCC-CCcEEEEcCceEecCCCccCCCC
Confidence 35677778888899988752 1 1 11 4445555432 356767653 222 122
Q ss_pred CCCCCcH---HHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCC
Q 022852 57 AGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (291)
Q Consensus 57 ~g~~D~~---~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~ 99 (291)
++=..|| +|-++.+++++++.+.+ ++.+|..+.-..|--
T Consensus 267 ~~M~~Mk~DM~GAAaVlg~~~a~a~l~----l~vnv~~~l~~~ENm 308 (491)
T 2hc9_A 267 TGMPNMKRDMGGAAGMLEAYSALVKHG----FSQTLHACLCIVENN 308 (491)
T ss_dssp TTSTTGGGGGHHHHHHHHHHHHHHTTT----CCSEEEEEEEEEEEC
T ss_pred cChhhccccccHHHHHHHHHHHHHHcC----CCceEEEEEEeeecC
Confidence 2212232 66777888999988774 567888887777764
No 75
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=30.49 E-value=2.3e+02 Score=26.48 Aligned_cols=84 Identities=11% Similarity=0.049 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHcCCeEEEc-c------c-------------cc-EEEEEeCCCCCCCEEEEcccCCCCCCCCC-------
Q 022852 8 AGNLIRQWMEDAGLRTWVD-H------L-------------GN-VHGRVEGLNASAQALLIGSHLDTVVDAGI------- 59 (291)
Q Consensus 8 ~~~~i~~~l~~~G~~v~~d-~------~-------------gn-v~a~~~g~~~~~~~l~l~sH~DtV~~~g~------- 59 (291)
.++++++.+++.|++|++- . + +- +.-+| +. ++.++|.|.|.==| +..|+
T Consensus 189 ~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~pPrli~l~y-~~-~~~~~i~LVGKGIT-FDsGGlslKp~~ 265 (482)
T 3ij3_A 189 LAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSRPPLLIDLKW-GD-IKAPKVTLVGKGVC-FDSGGLDIKTPG 265 (482)
T ss_dssp HHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSSCCEEEEEEE-SC-TTSCEEEEEECEEE-EECCTTSCCCHH
T ss_pred HHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCCCCEEEEEEe-CC-CCCCeEEEEccceE-eecCCccCcCcc
Confidence 4667777788889987652 1 1 11 33444 22 23466666654211 11133
Q ss_pred ------CCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCC
Q 022852 60 ------FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (291)
Q Consensus 60 ------~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~ 99 (291)
.|| +|-++.+++++++.+.+ ++.+|..+.-..|--
T Consensus 266 ~M~~MK~DM-gGAAaVlg~~~aia~l~----lpvnv~~ii~~~ENm 306 (482)
T 3ij3_A 266 GMLLMKKDM-GGAAHALGLARMIMLQQ----LPVRLRLLIPAVENA 306 (482)
T ss_dssp HHTTGGGGG-HHHHHHHHHHHHHHHTT----CSSEEEEEEEEEEEC
T ss_pred chhhccccc-hHHHHHHHHHHHHHHcC----CCceEEEEEEeeccC
Confidence 244 56677789999998874 567888887777664
No 76
>2zov_A Chemotaxis protein MOTB; 2-layer sandwich, bacterial flagellum, cell projection, flagellar rotation, inner membrane, membrane; 2.00A {Salmonella typhimurium}
Probab=29.59 E-value=88 Score=25.69 Aligned_cols=52 Identities=17% Similarity=0.156 Sum_probs=36.7
Q ss_pred EEEEcccCCCCCCCC----CCCcHHHHHHHHHHHHHHHHcCCCCCCCCCE-EEEEecCCC
Q 022852 44 ALLIGSHLDTVVDAG----IFDGSLGIITAISALKVLKSTGKLGKLKRPV-EVIAFSDEE 98 (291)
Q Consensus 44 ~l~l~sH~DtV~~~g----~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i-~~v~~~dEE 98 (291)
.|.+.||.|.++... .+....+..=|..+.++|.+.|+ . ...| .+.+..+..
T Consensus 103 ~I~I~GHTD~~g~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv--~-~~ri~~~~G~G~~~ 159 (210)
T 2zov_A 103 RISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGL--D-NGKVLRVVGMAATM 159 (210)
T ss_dssp CEEEEEEEECSCCCSSCSSCCHHHHHHHHHHHHHHHHHHTTC--C-TTCEEEEEEECCC-
T ss_pred eEEEEEEeCCCCCCCcccccchHHHHHHHHHHHHHHHHHcCC--C-HHHeeeEEEecccC
Confidence 689999999998732 24556777777888899988886 3 3456 566665444
No 77
>3cyp_B Chemotaxis protein MOTB; bacterial flagellar motor, peptidoglycan binding, bacterial flagellum, flagellar rotation, inner membrane, membrane; 1.60A {Helicobacter pylori} PDB: 3cyq_B* 3imp_B
Probab=29.05 E-value=1.1e+02 Score=23.10 Aligned_cols=53 Identities=15% Similarity=0.123 Sum_probs=36.6
Q ss_pred CEEEEcccCCCCCCC-CCC--CcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 022852 43 QALLIGSHLDTVVDA-GIF--DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (291)
Q Consensus 43 ~~l~l~sH~DtV~~~-g~~--D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE 98 (291)
..|.+.||.|..+.. +.+ ....+..=|..+..+|.+.++ ....|.+.+..+.+
T Consensus 37 ~~i~I~GhtD~~g~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~g~G~~~ 92 (138)
T 3cyp_B 37 VHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGV---NPNQLSFSSYGSTN 92 (138)
T ss_dssp CEEEEEEECCCCCC----CCSHHHHHHHHHHHHHHHHHHTTC---CGGGEEEEECTTCS
T ss_pred cEEEEEEecCCCCcccccchhHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEECccC
Confidence 468999999998652 223 566777777888999998886 44567666655444
No 78
>3khn_A MOTB protein, putative; structural genomics, OMPA-like domain, PSI-2, protein structure initiative; 2.03A {Desulfovibrio vulgaris str}
Probab=28.83 E-value=1.2e+02 Score=23.74 Aligned_cols=53 Identities=13% Similarity=0.176 Sum_probs=37.8
Q ss_pred CEEEEcccCCCCC-CC-CC--CCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 022852 43 QALLIGSHLDTVV-DA-GI--FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (291)
Q Consensus 43 ~~l~l~sH~DtV~-~~-g~--~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE 98 (291)
-.|.+.||.|.++ .. .. +....+..=|..+.++|.+.|+ ....|.+.+..+.+
T Consensus 83 ~~i~I~GhTD~~g~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~g~G~~~ 139 (174)
T 3khn_A 83 QNINIKGFTDDVQPSANARFKDNWEVSALRSVNVLRYFLGAGI---EPARLTATGLGELD 139 (174)
T ss_dssp CEEEEEEECCSCCCCTTSSCSSHHHHHHHHHHHHHHHHHHTTC---CGGGEEEEEEETSS
T ss_pred CeEEEEEEeCCCCCcCCCCchhHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEEcCcC
Confidence 4699999999987 22 22 3556777777888999998886 44567776666544
No 79
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=28.00 E-value=11 Score=35.23 Aligned_cols=38 Identities=13% Similarity=0.068 Sum_probs=29.1
Q ss_pred CCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCc
Q 022852 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (291)
Q Consensus 58 g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~ 100 (291)
.+.|++.++.++|.+++.+++ .++.++.++|+.-||.+
T Consensus 252 ~~lDdr~~~~~~l~al~~~~~-----~~~~~~~~~~~d~EEVG 289 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLEE-----TPNKTAICFLVDKEEIG 289 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSSC-----CCSSCEECCCBCSTTC-
T ss_pred ecCccHHHHHHHHHHHHhhhc-----cCCceEEEEEEcccccC
Confidence 456899999988888765432 25678999999999984
No 80
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=26.49 E-value=37 Score=31.63 Aligned_cols=37 Identities=30% Similarity=0.200 Sum_probs=29.6
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCCCc
Q 022852 57 AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (291)
Q Consensus 57 ~g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE~~ 100 (291)
+.+.|+..++.++|.+++.+ . ++.++.++++..||.+
T Consensus 245 ~~~lDnr~~~~~~l~al~~~---~----~~~~~~~~~~d~EEVG 281 (450)
T 2glf_A 245 AYGQDDRICAYTALRALLSA---N----PEKSIGVIFFDKEEIG 281 (450)
T ss_dssp ETTHHHHHHHHHHHHHHHHC---C----CSSCEEEEEESCGGGT
T ss_pred EecchhhHHHHHHHHHHHhc---C----CCceEEEEEEcccccC
Confidence 45679999999888887654 2 3568999999999984
No 81
>2o8m_C Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 2obq_B 3lon_B* 1n1l_C* 1rtl_C* 2a4g_B* 1a1r_C* 2a4q_B* 2f9u_B* 2f9v_B* 2fm2_B* 2gvf_B* 2obo_B* 2a4r_B* 2oc1_B* 2oc7_B* 2oc8_B* 2xcf_C* 2xcn_C* 2xni_C* 3eyd_B* ...
Probab=24.96 E-value=66 Score=17.26 Aligned_cols=22 Identities=27% Similarity=0.365 Sum_probs=17.2
Q ss_pred CceEEEEEEeecCCCcccccCce
Q 022852 251 SLVCTVGEISSWPSASNVIPGEA 273 (291)
Q Consensus 251 ~~~~~vg~i~~G~~~~NvIP~~a 273 (291)
.++..+|.|.-+ ..+-++||+-
T Consensus 3 G~VvIvGri~l~-gkp~v~Pdre 24 (26)
T 2o8m_C 3 GCVVIVGRIVLS-GKPAIIPKKX 24 (26)
T ss_dssp CCBEEEEEEECS-CCCEECCCC-
T ss_pred ceEEEEEEEEEC-CceEEcCCcC
Confidence 345678999988 8899999974
No 82
>3s0y_A Motility protein B; peptidoglycan binding, flagellar rotation, chemotaxis, bacte flagellar motor, membrane, motor protein; 1.80A {Helicobacter pylori} PDB: 3s0w_A
Probab=23.83 E-value=1.7e+02 Score=23.37 Aligned_cols=52 Identities=13% Similarity=0.074 Sum_probs=37.3
Q ss_pred EEEEcccCCCCCCCC---CCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 022852 44 ALLIGSHLDTVVDAG---IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (291)
Q Consensus 44 ~l~l~sH~DtV~~~g---~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE 98 (291)
.|.+.||.|.++..+ .+....+..=|..+..+|.+.|+ ....|.+.+..+.+
T Consensus 93 ~i~I~GhTD~~g~~~~~~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~g~G~~~ 147 (193)
T 3s0y_A 93 HINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGV---NPNQLSFSSYGSTN 147 (193)
T ss_dssp EEEEEECCCSCCCTTSSCSCHHHHHHHHHHHHHHHHHHTTC---CGGGEEEEECTTSC
T ss_pred EEEEEEEeCCCCCccccchhHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEECCcC
Confidence 789999999987632 34556777777888999998886 44567666655443
No 83
>3lpe_A Putative transcription antitermination protein NU; transcription regulation, SPT4, SPT5, NUSG, archaea, evoluti directed RNA polymerase; 1.90A {Methanocaldococcus jannaschii} PDB: 3ewg_A
Probab=22.72 E-value=68 Score=22.59 Aligned_cols=23 Identities=17% Similarity=0.162 Sum_probs=20.5
Q ss_pred CCHhHHHHHHHHHHHHHHcCCeE
Q 022852 1 MSPASVRAGNLIRQWMEDAGLRT 23 (291)
Q Consensus 1 ~s~~E~~~~~~i~~~l~~~G~~v 23 (291)
.|++|+++++.|.++.+..|+++
T Consensus 18 ~sG~E~~V~~~L~~~~~~~~l~i 40 (92)
T 3lpe_A 18 MVGQEKNIAGLMASRAEKEQLDV 40 (92)
T ss_dssp CTTCHHHHHHHHHHHHHHTTCCE
T ss_pred ECChHHHHHHHHHHHHHhcCCcE
Confidence 47899999999999999999874
No 84
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=22.24 E-value=1.4e+02 Score=28.08 Aligned_cols=51 Identities=24% Similarity=0.268 Sum_probs=0.0
Q ss_pred CHhHHHHHHHHHHHHHHcCCeEEEccc-----------------ccEEEEEeCCC--CCCCEEEEcccCCC
Q 022852 2 SPASVRAGNLIRQWMEDAGLRTWVDHL-----------------GNVHGRVEGLN--ASAQALLIGSHLDT 53 (291)
Q Consensus 2 s~~E~~~~~~i~~~l~~~G~~v~~d~~-----------------gnv~a~~~g~~--~~~~~l~l~sH~Dt 53 (291)
|+.++.+.+.++++|++.|| .+.++. ..++|..-|.. +...--++++|.|.
T Consensus 49 spT~~hav~~~~~~L~~aGF-~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~~ivgaHtDS 118 (496)
T 3vat_A 49 SPSPFHAVAECRSRLLQAGF-HELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDS 118 (496)
T ss_dssp CSSHHHHHHHHHHHHHHTTC-EECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCEEEEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHCcC-eEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCeEEEEEeccC
No 85
>4erh_A Outer membrane protein A; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.52A {Salmonella enterica subsp}
Probab=21.16 E-value=2.6e+02 Score=20.89 Aligned_cols=52 Identities=13% Similarity=0.185 Sum_probs=37.6
Q ss_pred CEEEEcccCCCCCCCCCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 022852 43 QALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (291)
Q Consensus 43 ~~l~l~sH~DtV~~~g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE 98 (291)
..|.+.||.|.... -.+....+..=+..+..+|.+.|+ ....|.+.+..+.+
T Consensus 56 ~~i~I~GhtD~~G~-~~~N~~LS~~RA~aV~~~L~~~Gv---~~~ri~~~g~G~~~ 107 (148)
T 4erh_A 56 GSVVVLGFTDRIGS-DAYNQGLSEKRAQSVVDYLISKGI---PSDKISARGMGESN 107 (148)
T ss_dssp CEEEEEEECCTTCT-TCSSSSHHHHHHHHHHHHHHTTTC---CGGGEEEEEEETCS
T ss_pred cEEEEEEECCCCCC-HHHHHHHHHHHHHHHHHHHHHcCC---CHHHEEEEEEcccC
Confidence 57899999998521 235567888888889999998886 44567776665544
No 86
>3oon_A Outer membrane protein (TPN50); protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG; 1.79A {Borrelia burgdorferi}
Probab=21.12 E-value=1e+02 Score=22.49 Aligned_cols=52 Identities=15% Similarity=0.010 Sum_probs=35.6
Q ss_pred EEEEcccCCCCCCCCCCCcHHHHHHHHHHHHHHHHcCCCCCCCCCEEEEEecCCC
Q 022852 44 ALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE 98 (291)
Q Consensus 44 ~l~l~sH~DtV~~~g~~D~~~gv~a~l~a~~~L~~~~~~~~~~~~i~~v~~~dEE 98 (291)
.|.+.||.|..+.. .+....+..=|..+..+|.+.|+ .....|.+.+..+.+
T Consensus 50 ~i~I~GhtD~~g~~-~~N~~LS~~RA~aV~~~L~~~Gv--~~~~ri~~~g~G~~~ 101 (123)
T 3oon_A 50 NILIEGHTEQFGLE-EEMHELSEKRARAIGNYLIKMKV--KDKDQILFKGWGSQK 101 (123)
T ss_dssp CEEEEECCCSCCCH-HHHHHHHHHHHHHHHHHHHHTTS--SCGGGEEEEECTTCC
T ss_pred eEEEEEEeCCCCCh-HHHHHHHHHHHHHHHHHHHHcCC--CchHeEEEEEEcCcC
Confidence 58899999987421 23456677777888899999886 425667666555433
Done!