Your job contains 1 sequence.
>022855
MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP
ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL
GTQGGNQAREGSNNPSTTTSESTTGSPAPNTNPLPNPWMAAGTGGAQTNTTRSSSLGDAR
PQTPAGIAGLSSPGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQ
LRSMVDSNSQLREMIQNPEFLRQLTNPETMQQMVTLQQFLLTQLGRAQSTQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022855
(291 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2059682 - symbol:DSK2 "AT2G17200" species:3702... 879 5.3e-88 1
TAIR|locus:2059677 - symbol:DSK2a "AT2G17190" species:370... 872 2.9e-87 1
UNIPROTKB|Q95M59 - symbol:UBQLN1 "Uncharacterized protein... 464 5.0e-44 1
UNIPROTKB|Q9UMX0 - symbol:UBQLN1 "Ubiquilin-1" species:96... 461 1.0e-43 1
UNIPROTKB|H9L0E0 - symbol:UBQLN4 "Uncharacterized protein... 457 2.8e-43 1
UNIPROTKB|H9L0E1 - symbol:UBQLN4 "Uncharacterized protein... 457 2.8e-43 1
UNIPROTKB|I3LSM3 - symbol:UBQLN1 "Uncharacterized protein... 455 4.5e-43 1
MGI|MGI:1860283 - symbol:Ubqln2 "ubiquilin 2" species:100... 448 2.5e-42 1
MGI|MGI:1860276 - symbol:Ubqln1 "ubiquilin 1" species:100... 447 3.2e-42 1
UNIPROTKB|E2RTI3 - symbol:UBQLN2 "Uncharacterized protein... 444 6.6e-42 1
UNIPROTKB|Q9NRR5 - symbol:UBQLN4 "Ubiquilin-4" species:96... 444 6.6e-42 1
UNIPROTKB|F1RLP9 - symbol:UBQLN4 "Uncharacterized protein... 444 6.6e-42 1
RGD|620745 - symbol:Ubqln1 "ubiquilin 1" species:10116 "R... 444 6.6e-42 1
UNIPROTKB|G5E628 - symbol:UBQLN2 "Uncharacterized protein... 443 8.4e-42 1
FB|FBgn0031057 - symbol:Ubqn "Ubiquilin" species:7227 "Dr... 443 8.4e-42 1
UNIPROTKB|Q9UHD9 - symbol:UBQLN2 "Ubiquilin-2" species:96... 443 8.4e-42 1
MGI|MGI:2150152 - symbol:Ubqln4 "ubiquilin 4" species:100... 443 8.4e-42 1
RGD|1308273 - symbol:Ubqln4 "ubiquilin 4" species:10116 "... 443 8.4e-42 1
UNIPROTKB|F1N6D3 - symbol:F1N6D3 "Uncharacterized protein... 442 1.1e-41 1
RGD|1563566 - symbol:Ubqln2 "ubiquilin 2" species:10116 "... 438 3.8e-41 1
DICTYBASE|DDB_G0267452 - symbol:sonA "ubiquilin domain-co... 429 2.6e-40 1
MGI|MGI:3045291 - symbol:Ubqln3 "ubiquilin 3" species:100... 305 1.2e-27 2
CGD|CAL0004315 - symbol:orf19.5345 species:5476 "Candida ... 156 4.1e-09 1
POMBASE|SPAC26A3.16 - symbol:dph1 "UBA domain protein Dph... 150 2.4e-08 1
SGD|S000004889 - symbol:DSK2 "Nuclear-enriched ubiquitin-... 141 3.2e-07 1
ASPGD|ASPL0000027269 - symbol:AN5451 species:162425 "Emer... 138 9.7e-07 1
GENEDB_PFALCIPARUM|PF11_0142 - symbol:PF11_0142 "hypothet... 123 9.9e-07 2
UNIPROTKB|Q8IIM8 - symbol:PF11_0142 "Ubiquitin domain con... 123 9.9e-07 2
UNIPROTKB|G4MYL1 - symbol:MGG_01318 "Deubiquitination-pro... 134 2.6e-06 1
MGI|MGI:2685336 - symbol:Ubqlnl "ubiquilin-like" species:... 121 1.0e-05 2
>TAIR|locus:2059682 [details] [associations]
symbol:DSK2 "AT2G17200" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
GO:GO:0005829 EMBL:CP002685 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
InterPro:IPR006636 InterPro:IPR015496 PANTHER:PTHR10677
SMART:SM00727 EMBL:AC007127 HSSP:Q9UHD9 OMA:MARNPSM EMBL:AY142486
IPI:IPI00538993 PIR:C84549 RefSeq:NP_179311.1 UniGene:At.22593
ProteinModelPortal:Q9SII8 SMR:Q9SII8 IntAct:Q9SII8 STRING:Q9SII8
PRIDE:Q9SII8 EnsemblPlants:AT2G17200.1 GeneID:816225
KEGG:ath:AT2G17200 TAIR:At2g17200 InParanoid:Q9SII8
PhylomeDB:Q9SII8 ProtClustDB:CLSN2693479 Genevestigator:Q9SII8
Uniprot:Q9SII8
Length = 551
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 177/290 (61%), Positives = 208/290 (71%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
+R++MN P +QNLMNNPE MR++IMNNPQMRE++DRNPEL H+LNDPS LRQTLEAARNP
Sbjct: 171 IRDMMNTPAIQNLMNNPEFMRSMIMNNPQMRELVDRNPELGHVLNDPSILRQTLEAARNP 230
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDN-SNPFAAL 119
ELMREMMRNTDRAMSNIES PEGFNMLRRMYE VQEP +NAT+M+GNAGN+ SNPFAAL
Sbjct: 231 ELMREMMRNTDRAMSNIESMPEGFNMLRRMYENVQEPLMNATTMSGNAGNNTGSNPFAAL 290
Query: 120 LGTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDA 179
LG QG PN NPLPNPW R++ GDA
Sbjct: 291 LGNQG--VTTQGSDASNNSSTPNAGTGTIPNANPLPNPW--GATGGQTTAPGRTNVGGDA 346
Query: 180 RPQTPAGIAGLSSPG---------FEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQY 230
R G+ GL S G + GA D + L+Q+LQNPA++QMMQS+ SNPQY
Sbjct: 347 RSPGLGGLGGLGSLGGLGGLGMLGADSPLGATPDASQLSQLLQNPAISQMMQSVFSNPQY 406
Query: 231 MNQILGLNPQLRSMVDSNSQLREMIQNPEFLRQLTNPETMQQMVTLQQFL 280
MNQ++ LNPQLRSM+DSN QLREM+QNP+FLRQ ++PE MQQM+TLQQ L
Sbjct: 407 MNQLMSLNPQLRSMLDSNPQLREMMQNPDFLRQFSSPEMMQQMMTLQQSL 456
Score = 142 (55.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 42/147 (28%), Positives = 68/147 (46%)
Query: 148 APNTNPLPNPWMXXXXXXXXXX---XXRSSSLGDARPQ---------TPAG----IAGLS 191
AP++ P P P SS+LG A P P G ++GL
Sbjct: 91 APSSAPPPAPAASQTTAPSVTRGVGSDNSSNLGGASPGESLFPGLGFNPLGGGNAMSGLF 150
Query: 192 SPGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQLRSMVDSNSQL 251
G D+ Q M+++ T +Q+L++NP++M ++ NPQ+R +VD N +L
Sbjct: 151 GAGLPDLVQTQQQLAQNPNMIRDMMNTPAIQNLMNNPEFMRSMIMNNPQMRELVDRNPEL 210
Query: 252 REMIQNPEFLRQLT----NPETMQQMV 274
++ +P LRQ NPE M++M+
Sbjct: 211 GHVLNDPSILRQTLEAARNPELMREMM 237
>TAIR|locus:2059677 [details] [associations]
symbol:DSK2a "AT2G17190" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR009060
Pfam:PF00240 Pfam:PF00627 SMART:SM00213 EMBL:CP002685
GenomeReviews:CT485783_GR InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
eggNOG:COG5272 KO:K04523 InterPro:IPR006636 InterPro:IPR015496
PANTHER:PTHR10677 SMART:SM00727 EMBL:AC007127 HOGENOM:HOG000234878
OMA:WGATAGQ HSSP:Q9UHD9 ProtClustDB:CLSN2693479 EMBL:AF360159
EMBL:AY042828 EMBL:AY081450 EMBL:AY113886 EMBL:AK228616
IPI:IPI00531268 PIR:B84549 RefSeq:NP_565407.1 UniGene:At.21851
ProteinModelPortal:Q9SII9 SMR:Q9SII9 PaxDb:Q9SII9 PRIDE:Q9SII9
ProMEX:Q9SII9 EnsemblPlants:AT2G17190.1 GeneID:816224
KEGG:ath:AT2G17190 TAIR:At2g17190 InParanoid:Q9SII9
PhylomeDB:Q9SII9 ArrayExpress:Q9SII9 Genevestigator:Q9SII9
Uniprot:Q9SII9
Length = 538
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 173/284 (60%), Positives = 206/284 (72%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
+RE+MN P +QNLMNNPE MR++IMNNPQMRE++DRNPEL H+LNDPS LRQTLEAARNP
Sbjct: 166 IREMMNTPAIQNLMNNPEFMRSMIMNNPQMRELVDRNPELGHVLNDPSILRQTLEAARNP 225
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGND-NSNPFAAL 119
ELMREMMRNTDRAMSNIES PEGFNMLRRMYE VQEP +NAT+M+ NAGN+ +SNPFAAL
Sbjct: 226 ELMREMMRNTDRAMSNIESMPEGFNMLRRMYENVQEPLMNATTMSENAGNNTSSNPFAAL 285
Query: 120 LGTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDA 179
LG QG PN NPLPNPW ++ LG
Sbjct: 286 LGNQG---VTTQGSDTSNNISAPNAETGTPNANPLPNPW-GATAGQTTAPGRTNAGLGGL 341
Query: 180 RPQTPAGIAGLSSPGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNP 239
G+ GL G + GA D + L+Q+LQNPA++QMMQS+LSNPQYMNQ++ LNP
Sbjct: 342 GGL--GGLGGLGMLGADSPLGATPDASQLSQILQNPAMSQMMQSVLSNPQYMNQLMSLNP 399
Query: 240 QLRSMVDSNSQLREMIQNPEFLRQLTNPETMQQMVTLQQFLLTQ 283
QLRSM+D N QLREM+QNP+FLRQ ++PE MQQM++LQQ L +Q
Sbjct: 400 QLRSMLDMNPQLREMMQNPDFLRQFSSPEMMQQMMSLQQSLFSQ 443
Score = 146 (56.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 33/96 (34%), Positives = 56/96 (58%)
Query: 187 IAGLSSPGFEDIFGAMQ----DTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQLR 242
+AGL G D+ A Q + N + +M+ PA+ Q+L++NP++M ++ NPQ+R
Sbjct: 141 MAGLFGSGLPDLEQAQQQLAQNPNMIREMMNTPAI----QNLMNNPEFMRSMIMNNPQMR 196
Query: 243 SMVDSNSQLREMIQNPEFLRQLT----NPETMQQMV 274
+VD N +L ++ +P LRQ NPE M++M+
Sbjct: 197 ELVDRNPELGHVLNDPSILRQTLEAARNPELMREMM 232
>UNIPROTKB|Q95M59 [details] [associations]
symbol:UBQLN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043234 "protein complex" evidence=IEA] [GO:0031396
"regulation of protein ubiquitination" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR009060 InterPro:IPR016024
Pfam:PF00240 Pfam:PF00627 SMART:SM00213 GO:GO:0005783 GO:GO:0006915
GO:GO:0043234 SUPFAM:SSF48371 GO:GO:0001666 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053
GO:GO:0031396 SUPFAM:SSF46934 KO:K04523 InterPro:IPR006636
InterPro:IPR015496 PANTHER:PTHR10677 SMART:SM00727
GeneTree:ENSGT00390000005720 CTD:29979 HOVERGEN:HBG064537
OMA:MQQITEN HOGENOM:HOG000234878 HSSP:Q9UHD9 EMBL:DAAA02023899
EMBL:DAAA02023900 EMBL:AY035552 IPI:IPI00701359 RefSeq:NP_777053.1
UniGene:Bt.92088 SMR:Q95M59 Ensembl:ENSBTAT00000019747
GeneID:282392 KEGG:bta:282392 InParanoid:Q95M59 NextBio:20806179
Uniprot:Q95M59
Length = 595
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 118/303 (38%), Positives = 164/303 (54%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P +RQTLE ARNP
Sbjct: 186 MVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 245
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP L+A NPFA+L+
Sbjct: 246 AMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQE-----QFGGNPFASLV 300
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDAR 180
+ N +PLPNPW +SS+G
Sbjct: 301 SNTSSGEG--------------SQPSRTENRDPLPNPWAPQASQSSSASSGTTSSVGGTS 346
Query: 181 PQTPAGIAGLSS--PGFEDIFGA-MQDTNSLNQMLQNPAVT-QMMQSLLSNP--QYMNQI 234
G AG SS P GA M +T + +LQ Q+MQ++LS P + M Q
Sbjct: 347 GSAAGGTAGQSSAAPNLGPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQS 406
Query: 235 LGLNPQLRS--MVDS-----NSQLREMI--QNPEFLRQLTNPETMQQMVT---LQQFLLT 282
L NP L + M+++ N QL+E + Q P FL+Q+ NP+T+ M +Q L
Sbjct: 407 LSQNPDLAAQMMLNNPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQI 466
Query: 283 QLG 285
Q G
Sbjct: 467 QQG 469
Score = 199 (75.1 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 83/295 (28%), Positives = 122/295 (41%)
Query: 11 QNLMNNPEIMRNLIMNNPQMREIIDRNPELAH--ILNDPSTLRQTLEAARNPELMREMMR 68
+ LM+NPE+M IM NP ++ ++ NP+L I+ +P ++Q ++ RNPE+ M+
Sbjct: 177 RQLMSNPEMMVQ-IMENPFVQSMLS-NPDLMRQLIMANPQ-MQQLIQ--RNPEISH-MLN 230
Query: 69 NTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG--NA----GNDNSNPFAALLGT 122
N D +E + M++ M N S+ G NA D P +
Sbjct: 231 NPDIMRQTLELARNPA-MMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQE 289
Query: 123 Q-GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARP 181
Q GGN N +PLPNPW +SS+G
Sbjct: 290 QFGGNP--FASLVSNTSSGEGSQPSRTENRDPLPNPWAPQASQSSSASSGTTSSVGGTSG 347
Query: 182 QTPAGIAGLSS--PGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNP 239
G AG SS P GA M P + ++Q + NPQ M +L P
Sbjct: 348 SAAGGTAGQSSAAPNLGPGVGA--------SMFNTPGMQSLLQQITENPQLMQNMLSA-P 398
Query: 240 QLRSMVDSNSQ-----LREMIQNPEFLRQLTNPETMQQMVTLQQFLLTQLGRAQS 289
+RSM+ S SQ + M+ NP F NP+ +QM +Q L T L + Q+
Sbjct: 399 YMRSMMQSLSQNPDLAAQMMLNNPLFAG---NPQLQEQM---RQQLPTFLQQMQN 447
>UNIPROTKB|Q9UMX0 [details] [associations]
symbol:UBQLN1 "Ubiquilin-1" species:9606 "Homo sapiens"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0019900 "kinase binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IMP;IDA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA;NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0031396 "regulation of protein
ubiquitination" evidence=IDA] [GO:0001666 "response to hypoxia"
evidence=IMP] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0043234 "protein
complex" evidence=IDA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 InterPro:IPR016024 Pfam:PF00240 Pfam:PF00627
SMART:SM00213 Prosite:PS00299 GO:GO:0005783 GO:GO:0005634
GO:GO:0048471 GO:GO:0006915 GO:GO:0043234 SUPFAM:SSF48371
GO:GO:0001666 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
GO:GO:0000502 EMBL:CH471089 InterPro:IPR019955 PROSITE:PS50053
GO:GO:0031396 SUPFAM:SSF46934 eggNOG:COG5272 KO:K04523
InterPro:IPR006636 InterPro:IPR015496 PANTHER:PTHR10677
SMART:SM00727 EMBL:AL354920 PDB:2JY6 PDBsum:2JY6 EMBL:AF176069
EMBL:AF293384 EMBL:AB035275 EMBL:AL136643 EMBL:BC010066
EMBL:BC039294 EMBL:AK074535 IPI:IPI00071180 IPI:IPI00099550
RefSeq:NP_038466.2 RefSeq:NP_444295.1 UniGene:Hs.9589 PDB:2JY5
PDB:2KLC PDBsum:2JY5 PDBsum:2KLC ProteinModelPortal:Q9UMX0
SMR:Q9UMX0 IntAct:Q9UMX0 MINT:MINT-150317 STRING:Q9UMX0
PhosphoSite:Q9UMX0 DMDM:48475013 REPRODUCTION-2DPAGE:IPI00071180
PaxDb:Q9UMX0 PRIDE:Q9UMX0 Ensembl:ENST00000257468
Ensembl:ENST00000376395 GeneID:29979 KEGG:hsa:29979 UCSC:uc004amv.3
UCSC:uc004amw.3 CTD:29979 GeneCards:GC09M086274 HGNC:HGNC:12508
HPA:CAB037256 MIM:605046 neXtProt:NX_Q9UMX0 PharmGKB:PA37155
HOVERGEN:HBG064537 InParanoid:Q9UMX0 OMA:MQQITEN OrthoDB:EOG48KRBD
PhylomeDB:Q9UMX0 ChiTaRS:UBQLN1 EvolutionaryTrace:Q9UMX0
GenomeRNAi:29979 NextBio:52732 Bgee:Q9UMX0 CleanEx:HS_UBQLN1
Genevestigator:Q9UMX0 GermOnline:ENSG00000135018 Uniprot:Q9UMX0
Length = 589
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 116/303 (38%), Positives = 166/303 (54%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P +RQTLE ARNP
Sbjct: 186 MVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 245
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP L+A NPFA+L+
Sbjct: 246 AMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQE-----QFGGNPFASLV 300
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDAR 180
+ N +PLPNPW +S++G
Sbjct: 301 SNTSSGEG--------------SQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTT 346
Query: 181 PQTPAGIAGLSS--PGFEDIFGA-MQDTNSLNQMLQNPAVT-QMMQSLLSNP--QYMNQI 234
T +G +G S+ P GA M +T + +LQ Q+MQ++LS P + M Q
Sbjct: 347 GSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQS 406
Query: 235 LGLNPQLRS--MVDS-----NSQLREMI--QNPEFLRQLTNPETMQQMVT---LQQFLLT 282
L NP L + M+++ N QL+E + Q P FL+Q+ NP+T+ M +Q L
Sbjct: 407 LSQNPDLAAQMMLNNPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQI 466
Query: 283 QLG 285
Q G
Sbjct: 467 QQG 469
Score = 193 (73.0 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 80/295 (27%), Positives = 124/295 (42%)
Query: 11 QNLMNNPEIMRNLIMNNPQMREIIDRNPELAH--ILNDPSTLRQTLEAARNPELMREMMR 68
+ L++NPE+M IM NP ++ ++ NP+L I+ +P ++Q ++ RNPE+ M+
Sbjct: 177 RQLLSNPEMMVQ-IMENPFVQSMLS-NPDLMRQLIMANPQ-MQQLIQ--RNPEISH-MLN 230
Query: 69 NTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG--NA----GNDNSNPFAALLGT 122
N D +E + M++ M N S+ G NA D P +
Sbjct: 231 NPDIMRQTLELARNPA-MMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQE 289
Query: 123 Q-GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARP 181
Q GGN N +PLPNPW +S++G
Sbjct: 290 QFGGNP--FASLVSNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTG 347
Query: 182 QTPAGIAGLSS--PGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNP 239
T +G +G S+ P GA M P + ++Q + NPQ M +L P
Sbjct: 348 STASGTSGQSTTAPNLVPGVGA--------SMFNTPGMQSLLQQITENPQLMQNMLSA-P 398
Query: 240 QLRSMVDSNSQ-----LREMIQNPEFLRQLTNPETMQQMVTLQQFLLTQLGRAQS 289
+RSM+ S SQ + M+ NP F NP+ +QM +Q L T L + Q+
Sbjct: 399 YMRSMMQSLSQNPDLAAQMMLNNPLFAG---NPQLQEQM---RQQLPTFLQQMQN 447
Score = 158 (60.7 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 40/110 (36%), Positives = 61/110 (55%)
Query: 186 GIAGLSSPGFEDI-FGAMQDTNSLNQMLQNPAV-TQMM-----QSLLSNPQYMNQILGLN 238
G+AGLSS G F +Q + Q+L NP + Q+M QS+LSNP M Q++ N
Sbjct: 154 GLAGLSSLGLNTTNFSELQ-SQMQRQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMAN 212
Query: 239 PQLRSMVDSNSQLREMIQNPEFLRQLT----NPETMQQMVTLQQFLLTQL 284
PQ++ ++ N ++ M+ NP+ +RQ NP MQ+M+ Q L+ L
Sbjct: 213 PQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNL 262
>UNIPROTKB|H9L0E0 [details] [associations]
symbol:UBQLN4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031595 "nuclear proteasome complex" evidence=IEA] [GO:0031597
"cytosolic proteasome complex" evidence=IEA] [GO:0032434
"regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053
SUPFAM:SSF46934 InterPro:IPR006636 InterPro:IPR015496
PANTHER:PTHR10677 SMART:SM00727 GeneTree:ENSGT00390000005720
EMBL:AADN02074234 EMBL:AADN02074235 Ensembl:ENSGALT00000022714
Uniprot:H9L0E0
Length = 559
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 110/303 (36%), Positives = 165/303 (54%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
+ +IM P+VQN+M+NP++MR +IM NPQM+++++RNPE++H+LN+P +RQT+E ARNP
Sbjct: 157 LSQIMENPLVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 216
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP +A GN NPF++L
Sbjct: 217 AMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAARE--QFGN---NPFSSLT 271
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDAR 180
G + ++ N PLPNPW S G
Sbjct: 272 GNSESSSSQPLRTE---------------NREPLPNPWSPSPPASQSQAPSSEGSTGSGS 316
Query: 181 PQTPAGIA---GLSSPGF-------EDIFGAMQDTNSLNQMLQN----PAVTQMMQSLLS 226
Q+ ++ GL++ F ++ G +Q + Q++QN P + MMQ+L
Sbjct: 317 TQSTPTVSNPFGLNAASFGAGMFNSPEMQGLLQQISENPQLMQNMISAPYMRSMMQTLAQ 376
Query: 227 NPQYMNQIL------GLNPQLRSMVDSNSQL-REMIQNPEFLRQLTNPETMQQMVTLQQF 279
NP + QI+ NPQL+ + + + +QNP+ L LTNP MQ ++ +QQ
Sbjct: 377 NPDFAAQIMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPDSLSILTNPRAMQALLQIQQG 436
Query: 280 LLT 282
L T
Sbjct: 437 LQT 439
Score = 175 (66.7 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 72/286 (25%), Positives = 117/286 (40%)
Query: 12 NLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTD 71
N M + M+ +M+NP+M I NP + +++++P +RQ + A NP++ + M RN +
Sbjct: 138 NFMELQQQMQRQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIMA--NPQMQQLMERNPE 195
Query: 72 RAMSNIESSPEGFN----------MLRRMYETVQEPFLNATSMAG--NA----GNDNSNP 115
+S++ ++PE M++ M N S+ G NA D P
Sbjct: 196 --ISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEP 253
Query: 116 FAALLGTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSS 175
+ Q GN N PLPNPW S
Sbjct: 254 MFSAAREQFGNNP--FSSLTGNSESSSSQPLRTENREPLPNPWSPSPPASQSQAPSSEGS 311
Query: 176 LGDARPQTPAGIA---GLSSPGF-EDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNP--Q 229
G Q+ ++ GL++ F +F + + L Q+ +NP Q+MQ+++S P +
Sbjct: 312 TGSGSTQSTPTVSNPFGLNAASFGAGMFNSPEMQGLLQQISENP---QLMQNMISAPYMR 368
Query: 230 YMNQILGLNPQLRSMVDSNSQLREMIQNPEFLRQLTN--PETMQQM 273
M Q L NP + + N L NP+ QL P +QQM
Sbjct: 369 SMMQTLAQNPDFAAQIMVNVPL--FAGNPQLQEQLRLQLPVFLQQM 412
Score = 148 (57.2 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 183 TPAGIAGLSSPGFEDIFGAMQ-----DTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGL 237
T G G+ S F ++ MQ + L+Q+++NP V Q+++SNP M Q++
Sbjct: 127 TGLGNLGMGSANFMELQQQMQRQLMSNPEMLSQIMENPLV----QNMMSNPDLMRQMIMA 182
Query: 238 NPQLRSMVDSNSQLREMIQNPEFLRQLT----NPETMQQMVTLQQFLLTQL 284
NPQ++ +++ N ++ M+ NPE +RQ NP MQ+M+ Q L+ L
Sbjct: 183 NPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNL 233
>UNIPROTKB|H9L0E1 [details] [associations]
symbol:UBQLN4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031595 "nuclear proteasome complex" evidence=IEA] [GO:0031597
"cytosolic proteasome complex" evidence=IEA] [GO:0032434
"regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053
SUPFAM:SSF46934 InterPro:IPR006636 InterPro:IPR015496
PANTHER:PTHR10677 SMART:SM00727 GeneTree:ENSGT00390000005720
OMA:FGMSRTT EMBL:AADN02074234 EMBL:AADN02074235
Ensembl:ENSGALT00000022715 Uniprot:H9L0E1
Length = 561
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 110/303 (36%), Positives = 165/303 (54%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
+ +IM P+VQN+M+NP++MR +IM NPQM+++++RNPE++H+LN+P +RQT+E ARNP
Sbjct: 159 LSQIMENPLVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 218
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP +A GN NPF++L
Sbjct: 219 AMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAARE--QFGN---NPFSSLT 273
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDAR 180
G + ++ N PLPNPW S G
Sbjct: 274 GNSESSSSQPLRTE---------------NREPLPNPWSPSPPASQSQAPSSEGSTGSGS 318
Query: 181 PQTPAGIA---GLSSPGF-------EDIFGAMQDTNSLNQMLQN----PAVTQMMQSLLS 226
Q+ ++ GL++ F ++ G +Q + Q++QN P + MMQ+L
Sbjct: 319 TQSTPTVSNPFGLNAASFGAGMFNSPEMQGLLQQISENPQLMQNMISAPYMRSMMQTLAQ 378
Query: 227 NPQYMNQIL------GLNPQLRSMVDSNSQL-REMIQNPEFLRQLTNPETMQQMVTLQQF 279
NP + QI+ NPQL+ + + + +QNP+ L LTNP MQ ++ +QQ
Sbjct: 379 NPDFAAQIMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPDSLSILTNPRAMQALLQIQQG 438
Query: 280 LLT 282
L T
Sbjct: 439 LQT 441
Score = 175 (66.7 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 72/286 (25%), Positives = 117/286 (40%)
Query: 12 NLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTD 71
N M + M+ +M+NP+M I NP + +++++P +RQ + A NP++ + M RN +
Sbjct: 140 NFMELQQQMQRQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIMA--NPQMQQLMERNPE 197
Query: 72 RAMSNIESSPEGFN----------MLRRMYETVQEPFLNATSMAG--NA----GNDNSNP 115
+S++ ++PE M++ M N S+ G NA D P
Sbjct: 198 --ISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEP 255
Query: 116 FAALLGTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSS 175
+ Q GN N PLPNPW S
Sbjct: 256 MFSAAREQFGNNP--FSSLTGNSESSSSQPLRTENREPLPNPWSPSPPASQSQAPSSEGS 313
Query: 176 LGDARPQTPAGIA---GLSSPGF-EDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNP--Q 229
G Q+ ++ GL++ F +F + + L Q+ +NP Q+MQ+++S P +
Sbjct: 314 TGSGSTQSTPTVSNPFGLNAASFGAGMFNSPEMQGLLQQISENP---QLMQNMISAPYMR 370
Query: 230 YMNQILGLNPQLRSMVDSNSQLREMIQNPEFLRQLTN--PETMQQM 273
M Q L NP + + N L NP+ QL P +QQM
Sbjct: 371 SMMQTLAQNPDFAAQIMVNVPL--FAGNPQLQEQLRLQLPVFLQQM 414
Score = 148 (57.2 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 183 TPAGIAGLSSPGFEDIFGAMQ-----DTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGL 237
T G G+ S F ++ MQ + L+Q+++NP V Q+++SNP M Q++
Sbjct: 129 TGLGNLGMGSANFMELQQQMQRQLMSNPEMLSQIMENPLV----QNMMSNPDLMRQMIMA 184
Query: 238 NPQLRSMVDSNSQLREMIQNPEFLRQLT----NPETMQQMVTLQQFLLTQL 284
NPQ++ +++ N ++ M+ NPE +RQ NP MQ+M+ Q L+ L
Sbjct: 185 NPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNL 235
>UNIPROTKB|I3LSM3 [details] [associations]
symbol:UBQLN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0031396
"regulation of protein ubiquitination" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR009060 InterPro:IPR016024
Pfam:PF00240 Pfam:PF00627 SMART:SM00213 GO:GO:0005783 GO:GO:0006915
GO:GO:0043234 SUPFAM:SSF48371 GO:GO:0001666 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053
GO:GO:0031396 SUPFAM:SSF46934 InterPro:IPR006636 InterPro:IPR015496
PANTHER:PTHR10677 SMART:SM00727 GeneTree:ENSGT00390000005720
OMA:MQQITEN EMBL:FP565760 EMBL:FP476077 Ensembl:ENSSSCT00000027988
Uniprot:I3LSM3
Length = 589
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 115/303 (37%), Positives = 164/303 (54%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P +RQTLE ARNP
Sbjct: 186 MVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 245
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP L+A NPFA+L+
Sbjct: 246 AMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQE-----QFGGNPFASLV 300
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDAR 180
+ N +PLPNPW +S++G
Sbjct: 301 SNTSSGEG--------------SQPSRTENRDPLPNPWAPQASQSSSASSGTTSAVGGTS 346
Query: 181 PQTPAGIAGLSS--PGFEDIFGA-MQDTNSLNQMLQNPAVT-QMMQSLLSNP--QYMNQI 234
+G G +S P GA M +T + +LQ Q+MQ++LS P + M Q
Sbjct: 347 GSAASGTTGQNSTAPNLGPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQS 406
Query: 235 LGLNPQLRS--MVDS-----NSQLREMI--QNPEFLRQLTNPETMQQMVT---LQQFLLT 282
L NP L + M+++ N QL+E + Q P FL+Q+ NP+T+ M +Q L
Sbjct: 407 LSQNPDLAAQMMLNNPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQI 466
Query: 283 QLG 285
Q G
Sbjct: 467 QQG 469
Score = 190 (71.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 80/295 (27%), Positives = 122/295 (41%)
Query: 11 QNLMNNPEIMRNLIMNNPQMREIIDRNPELAH--ILNDPSTLRQTLEAARNPELMREMMR 68
+ LM+NPE+M IM NP ++ ++ NP+L I+ +P ++Q ++ RNPE+ M+
Sbjct: 177 RQLMSNPEMMVQ-IMENPFVQSMLS-NPDLMRQLIMANPQ-MQQLIQ--RNPEISH-MLN 230
Query: 69 NTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG--NA----GNDNSNPFAALLGT 122
N D +E + M++ M N S+ G NA D P +
Sbjct: 231 NPDIMRQTLELARNPA-MMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQE 289
Query: 123 Q-GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARP 181
Q GGN N +PLPNPW +S++G
Sbjct: 290 QFGGNP--FASLVSNTSSGEGSQPSRTENRDPLPNPWAPQASQSSSASSGTTSAVGGTSG 347
Query: 182 QTPAGIAGLSS--PGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNP 239
+G G +S P GA M P + ++Q + NPQ M +L P
Sbjct: 348 SAASGTTGQNSTAPNLGPGVGA--------SMFNTPGMQSLLQQITENPQLMQNMLSA-P 398
Query: 240 QLRSMVDSNSQ-----LREMIQNPEFLRQLTNPETMQQMVTLQQFLLTQLGRAQS 289
+RSM+ S SQ + M+ NP F NP+ +QM +Q L T L + Q+
Sbjct: 399 YMRSMMQSLSQNPDLAAQMMLNNPLFAG---NPQLQEQM---RQQLPTFLQQMQN 447
Score = 156 (60.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 39/110 (35%), Positives = 61/110 (55%)
Query: 186 GIAGLSSPGFEDI-FGAMQDTNSLNQMLQNPAV-TQMM-----QSLLSNPQYMNQILGLN 238
G+AGLSS G F +Q + Q++ NP + Q+M QS+LSNP M Q++ N
Sbjct: 154 GLAGLSSLGLNTTNFSELQ-SQMQRQLMSNPEMMVQIMENPFVQSMLSNPDLMRQLIMAN 212
Query: 239 PQLRSMVDSNSQLREMIQNPEFLRQLT----NPETMQQMVTLQQFLLTQL 284
PQ++ ++ N ++ M+ NP+ +RQ NP MQ+M+ Q L+ L
Sbjct: 213 PQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNL 262
Score = 41 (19.5 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 100 NATSMAGNAGNDNSNPFAALLGTQGG 125
+A S +G+ SNPF LG GG
Sbjct: 131 SAPSSNSTSGSATSNPFG--LGGLGG 154
Score = 36 (17.7 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 9/47 (19%), Positives = 20/47 (42%)
Query: 35 DRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSP 81
D++ H ++D T+ ++ P+ NT + + S+P
Sbjct: 87 DQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTSGSNATTSSAP 133
>MGI|MGI:1860283 [details] [associations]
symbol:Ubqln2 "ubiquilin 2" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR009060
InterPro:IPR016024 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
MGI:MGI:1860283 Prosite:PS00299 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
eggNOG:COG5272 KO:K04523 InterPro:IPR006636 InterPro:IPR015496
PANTHER:PTHR10677 SMART:SM00727 GeneTree:ENSGT00390000005720
HOVERGEN:HBG064537 OrthoDB:EOG48KRBD HOGENOM:HOG000234878 CTD:29978
EMBL:AF177346 EMBL:AL844583 EMBL:CH466653 EMBL:BC021824
EMBL:BC053022 IPI:IPI00387416 RefSeq:NP_061268.2 UniGene:Mm.430772
ProteinModelPortal:Q9QZM0 SMR:Q9QZM0 STRING:Q9QZM0
PhosphoSite:Q9QZM0 PaxDb:Q9QZM0 PRIDE:Q9QZM0
Ensembl:ENSMUST00000060714 GeneID:54609 KEGG:mmu:54609
InParanoid:B1AY62 NextBio:311408 Bgee:Q9QZM0 CleanEx:MM_UBQLN2
Genevestigator:Q9QZM0 GermOnline:ENSMUSG00000050148 Uniprot:Q9QZM0
Length = 638
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 112/305 (36%), Positives = 156/305 (51%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P +RQTLE ARNP
Sbjct: 193 MIQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNP 252
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN D A+SN+ES P G+N LRRMY +QEP LNA NPFA
Sbjct: 253 AMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQE-----QFGGNPFA--- 304
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPW------MXXXXXXXXXXXXRSS 174
T G + N +PLPNPW S
Sbjct: 305 -TVGSSST----------SGEGTQPSRTENRDPLPNPWAPPPTTQTAATTTTTTTTSSGS 353
Query: 175 SLGDARPQTPAG--------IAGL-SSPGFEDIFGAMQDTNSLNQ-MLQNPAVTQMMQSL 224
G + T AG +A + S+PG + + + + L Q ML P + MMQSL
Sbjct: 354 GSGSSSSSTTAGNTMAAANYVASIFSTPGMQSLLQQITENPQLIQNMLSAPYMRSMMQSL 413
Query: 225 LSNPQYMNQILGLNPQLRSMVDSNSQLR-------EMIQNPEFLRQLTNPETMQQMVTLQ 277
NP Q++ +P S Q+R + +QNPE + ++NP MQ ++ +Q
Sbjct: 414 SQNPDMAAQMMLSSPLFTSNPQLQEQMRPQLPNFLQQMQNPETIAAMSNPRAMQALMQIQ 473
Query: 278 QFLLT 282
Q L T
Sbjct: 474 QGLQT 478
Score = 159 (61.0 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 72/290 (24%), Positives = 115/290 (39%)
Query: 3 EIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAH--ILNDPSTLRQTLEAARNP 60
E+ N + Q L+ +PE+M IM NP ++ ++ NP+L I+ +P ++Q ++ RNP
Sbjct: 177 ELQNQ-MQQQLLASPEMMIQ-IMENPFVQSMLS-NPDLMRQLIMANPQ-MQQLIQ--RNP 230
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG--NA----GNDNSN 114
E+ ++ N D +E + M++ M N S+ G NA D
Sbjct: 231 EISH-LLNNPDIMRQTLEIARNPA-MMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQE 288
Query: 115 PFAALLGTQ-GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRS 173
P Q GGN N +PLPNPW +
Sbjct: 289 PMLNAAQEQFGGNP--FATVGSSSTSGEGTQPSRTENRDPLPNPWAPPPTTQTAATTTTT 346
Query: 174 SSLGDARPQTPAGIAGLSSPGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQYMNQ 233
++ T +G SS M N + + P + ++Q + NPQ +
Sbjct: 347 TT-------TSSGSGSGSSSSSTTAGNTMAAANYVASIFSTPGMQSLLQQITENPQLIQN 399
Query: 234 ILGLNPQLRSMVDSNSQLREMIQNPEFLRQL--TNPETMQQM-VTLQQFL 280
+L P +RSM+ S SQ +M L +NP+ +QM L FL
Sbjct: 400 MLSA-PYMRSMMQSLSQNPDMAAQMMLSSPLFTSNPQLQEQMRPQLPNFL 448
Score = 155 (59.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 39/121 (32%), Positives = 65/121 (53%)
Query: 173 SSSLGDARPQTPAGIAGLSSPGFEDIFGAMQDT-----NSLNQMLQNPAVTQMMQSLLSN 227
SSS G + + + GL+SP F ++ MQ + Q+++NP V QS+LSN
Sbjct: 154 SSSFGLGSLSSLSNL-GLNSPNFTELQNQMQQQLLASPEMMIQIMENPFV----QSMLSN 208
Query: 228 PQYMNQILGLNPQLRSMVDSNSQLREMIQNPEFLRQLT----NPETMQQMVTLQQFLLTQ 283
P M Q++ NPQ++ ++ N ++ ++ NP+ +RQ NP MQ+M+ Q L+
Sbjct: 209 PDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNPAMMQEMMRNQDLALSN 268
Query: 284 L 284
L
Sbjct: 269 L 269
>MGI|MGI:1860276 [details] [associations]
symbol:Ubqln1 "ubiquilin 1" species:10090 "Mus musculus"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=ISO] [GO:0005102 "receptor binding"
evidence=NAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005783 "endoplasmic reticulum"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=ISO]
[GO:0019215 "intermediate filament binding" evidence=NAS]
[GO:0019900 "kinase binding" evidence=ISO] [GO:0019904 "protein
domain specific binding" evidence=ISO] [GO:0031396 "regulation of
protein ubiquitination" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR009060 InterPro:IPR016024
Pfam:PF00240 Pfam:PF00627 SMART:SM00213 MGI:MGI:1860276
Prosite:PS00299 GO:GO:0005783 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 SUPFAM:SSF48371 GO:GO:0001666 GO:GO:0005102
GO:GO:0019900 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
GO:GO:0000502 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031396
SUPFAM:SSF46934 eggNOG:COG5272 KO:K04523 InterPro:IPR006636
InterPro:IPR015496 PANTHER:PTHR10677 SMART:SM00727
GeneTree:ENSGT00390000005720 GO:GO:0019215 CTD:29979
HOVERGEN:HBG064537 OMA:MQQITEN OrthoDB:EOG48KRBD ChiTaRS:UBQLN1
EMBL:AF177345 EMBL:AK048534 EMBL:AK049298 EMBL:AK004183
EMBL:BC010213 EMBL:BC026847 EMBL:BC027375 EMBL:BC028857
EMBL:BC051098 IPI:IPI00153642 IPI:IPI00280207 RefSeq:NP_081118.4
RefSeq:NP_689420.1 UniGene:Mm.182053 ProteinModelPortal:Q8R317
SMR:Q8R317 IntAct:Q8R317 STRING:Q8R317 PhosphoSite:Q8R317
REPRODUCTION-2DPAGE:Q8R317 PaxDb:Q8R317 PRIDE:Q8R317
Ensembl:ENSMUST00000058735 Ensembl:ENSMUST00000076454 GeneID:56085
KEGG:mmu:56085 UCSC:uc007qtl.2 UCSC:uc007qtm.2 InParanoid:Q8R317
NextBio:311884 Bgee:Q8R317 CleanEx:MM_UBQLN1 Genevestigator:Q8R317
GermOnline:ENSMUSG00000005312 Uniprot:Q8R317
Length = 582
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 119/308 (38%), Positives = 163/308 (52%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P +RQTLE ARNP
Sbjct: 177 MVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 236
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP LNA NPFA+L+
Sbjct: 237 AMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLNAAQE-----QFGGNPFASLV 291
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSL---- 176
+ + N +PLPNPW S+
Sbjct: 292 SSSSSAEG--------------TQPSRTENRDPLPNPWAPQTSQSSPASGTTGSTTNTMS 337
Query: 177 --GDARPQTPAGIAGLSSPGFEDIFGA-MQDTNSLNQMLQNPAVT-QMMQSLLSNPQYMN 232
G TPAG S P GA M +T + +LQ Q+MQ++LS P YM
Sbjct: 338 TSGGTATSTPAG-QSTSGPSLVPGAGASMFNTPGMQSLLQQITENPQLMQNMLSAP-YMR 395
Query: 233 ---QILGLNPQLRS--MVDS-----NSQLREMI--QNPEFLRQLTNPETMQQMVT---LQ 277
Q L NP L + M+++ N QL+E + Q P FL+Q+ NP+T+ M +Q
Sbjct: 396 SMLQSLSQNPDLAAQMMLNNPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQ 455
Query: 278 QFLLTQLG 285
L Q G
Sbjct: 456 ALLQIQQG 463
Score = 181 (68.8 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 78/293 (26%), Positives = 119/293 (40%)
Query: 11 QNLMNNPEIMRNLIMNNPQMREIIDRNPELAH--ILNDPSTLRQTLEAARNPELMREMMR 68
+ L++NPE+M IM NP ++ ++ NP+L I+ +P ++Q ++ RNPE+ M+
Sbjct: 168 RQLLSNPEMMVQ-IMENPFVQSMLS-NPDLMRQLIMANPQ-MQQLIQ--RNPEISH-MLN 221
Query: 69 NTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG--NA----GNDNSNPFAALLGT 122
N D +E + M++ M N S+ G NA D P
Sbjct: 222 NPDIMRQTLELARNPA-MMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLNAAQE 280
Query: 123 Q-GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARP 181
Q GGN N +PLPNPW S+
Sbjct: 281 QFGGNP--FASLVSSSSSAEGTQPSRTENRDPLPNPWAPQTSQSSPASGTTGSTTNTM-- 336
Query: 182 QTPAGIAGLSSPGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQL 241
T G A S+P + G + M P + ++Q + NPQ M +L P +
Sbjct: 337 STSGGTA-TSTPAGQSTSGPSLVPGAGASMFNTPGMQSLLQQITENPQLMQNMLSA-PYM 394
Query: 242 RSMVDSNSQ-----LREMIQNPEFLRQLTNPETMQQMVTLQQFLLTQLGRAQS 289
RSM+ S SQ + M+ NP F NP+ +QM +Q L T L + Q+
Sbjct: 395 RSMLQSLSQNPDLAAQMMLNNPLFAG---NPQLQEQM---RQQLPTFLQQMQN 441
>UNIPROTKB|E2RTI3 [details] [associations]
symbol:UBQLN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR009060 InterPro:IPR016024
Pfam:PF00240 Pfam:PF00627 SMART:SM00213 GO:GO:0005886 GO:GO:0005737
SUPFAM:SSF48371 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934 KO:K04523
InterPro:IPR006636 InterPro:IPR015496 PANTHER:PTHR10677
SMART:SM00727 GeneTree:ENSGT00390000005720 CTD:29978 OMA:NRPQGQS
EMBL:AAEX03026415 RefSeq:XP_549029.2 ProteinModelPortal:E2RTI3
Ensembl:ENSCAFT00000026728 GeneID:491909 KEGG:cfa:491909
NextBio:20864608 Uniprot:E2RTI3
Length = 623
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 110/302 (36%), Positives = 157/302 (51%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P +RQTLE ARNP
Sbjct: 182 MIQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNP 241
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN D A+SN+ES P G+N LRRMY +QEP LNA NPFA++
Sbjct: 242 AMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQE-----QFGGNPFASV- 295
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDAR 180
G+ + N +PLPNPW +SS G
Sbjct: 296 ----GSSS---------TSGEGTQPSRTENRDPLPNPWAPPPATQSSATTSTTSSSGSGS 342
Query: 181 PQTPAGIAG------------LSSPGFEDIFGAMQDTNSLNQ-MLQNPAVTQMMQSLLSN 227
+ + G S+PG + + + + L Q ML P + MMQSL N
Sbjct: 343 GSSSSSATGNTVAAANYVASIFSTPGMQSLLQQITENPQLIQNMLSAPYMRSMMQSLSQN 402
Query: 228 P----QYM--NQILGLNPQLRSMVDSN-SQLREMIQNPEFLRQLTNPETMQQMVTLQQFL 280
P Q M + + NPQL+ + + +QNP+ L ++NP MQ ++ +QQ L
Sbjct: 403 PDLAAQMMLNSPVFTANPQLQEQMRPQLPAFLQQMQNPDTLSAMSNPRAMQALMQIQQGL 462
Query: 281 LT 282
T
Sbjct: 463 QT 464
Score = 168 (64.2 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 74/287 (25%), Positives = 121/287 (42%)
Query: 3 EIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAH--ILNDPSTLRQTLEAARNP 60
E+ N + Q L+++PE+M IM NP ++ ++ NP+L I+ +P ++Q ++ RNP
Sbjct: 166 ELQNQ-MQQQLLSSPEMMIQ-IMENPFVQSMLS-NPDLMRQLIMANPQ-MQQLIQ--RNP 219
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG--NA----GNDNSN 114
E+ ++ N D +E + M++ M N S+ G NA D
Sbjct: 220 EISH-LLNNPDIMRQTLEIARNPA-MMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQE 277
Query: 115 PFAALLGTQ-GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRS 173
P Q GGN N +PLPNPW +
Sbjct: 278 PMLNAAQEQFGGNP--FASVGSSSTSGEGTQPSRTENRDPLPNPWAPPPATQSSATTSTT 335
Query: 174 SSLGDARPQTPAGIAG--LSSPGF-EDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNP-- 228
SS G + + G +++ + IF + L Q+ +NP Q++Q++LS P
Sbjct: 336 SSSGSGSGSSSSSATGNTVAAANYVASIFSTPGMQSLLQQITENP---QLIQNMLSAPYM 392
Query: 229 QYMNQILGLNPQLRSMVDSNSQLREMIQNPEFLRQLTN--PETMQQM 273
+ M Q L NP L + + NS + NP+ Q+ P +QQM
Sbjct: 393 RSMMQSLSQNPDLAAQMMLNSPV--FTANPQLQEQMRPQLPAFLQQM 437
Score = 153 (58.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 38/110 (34%), Positives = 61/110 (55%)
Query: 186 GIAGLSSPGFEDI-FGAMQDTNSLNQMLQNPAVT-QMM-----QSLLSNPQYMNQILGLN 238
G+AGLSS G F +Q+ Q+L +P + Q+M QS+LSNP M Q++ N
Sbjct: 150 GLAGLSSLGLSSTNFSELQNQMQ-QQLLSSPEMMIQIMENPFVQSMLSNPDLMRQLIMAN 208
Query: 239 PQLRSMVDSNSQLREMIQNPEFLRQLT----NPETMQQMVTLQQFLLTQL 284
PQ++ ++ N ++ ++ NP+ +RQ NP MQ+M+ Q L+ L
Sbjct: 209 PQMQQLIQRNPEISHLLNNPDIMRQTLEIARNPAMMQEMMRNQDLALSNL 258
>UNIPROTKB|Q9NRR5 [details] [associations]
symbol:UBQLN4 "Ubiquilin-4" species:9606 "Homo sapiens"
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005789 "endoplasmic reticulum
membrane" evidence=ISS] [GO:0031597 "cytosolic proteasome complex"
evidence=IDA] [GO:0031595 "nuclear proteasome complex"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0032434 "regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627
SMART:SM00213 Prosite:PS00299 GO:GO:0005829 GO:GO:0005634
GO:GO:0048471 GO:GO:0005789 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 GO:GO:0031593 InterPro:IPR019955 PROSITE:PS50053
EMBL:AL355388 SUPFAM:SSF46934 eggNOG:COG5272 GO:GO:0032434
KO:K04523 InterPro:IPR006636 InterPro:IPR015496 PANTHER:PTHR10677
SMART:SM00727 HOVERGEN:HBG064537 OrthoDB:EOG48KRBD EMBL:AF188240
EMBL:AK098368 EMBL:AK314413 EMBL:BC006410 EMBL:BC018403
EMBL:BC063841 EMBL:AF113544 IPI:IPI00024502 IPI:IPI00477826
RefSeq:NP_064516.2 UniGene:Hs.283739 ProteinModelPortal:Q9NRR5
SMR:Q9NRR5 IntAct:Q9NRR5 MINT:MINT-1373057 STRING:Q9NRR5
PhosphoSite:Q9NRR5 DMDM:45476982 PaxDb:Q9NRR5 PRIDE:Q9NRR5
Ensembl:ENST00000368307 Ensembl:ENST00000368309 GeneID:56893
KEGG:hsa:56893 UCSC:uc001fna.3 CTD:56893 GeneCards:GC01M156005
HGNC:HGNC:1237 HPA:HPA027920 MIM:605440 neXtProt:NX_Q9NRR5
PharmGKB:PA25619 InParanoid:Q9NRR5 OMA:FGMSRTT PhylomeDB:Q9NRR5
ChiTaRS:UBQLN4 GenomeRNAi:56893 NextBio:62315 ArrayExpress:Q9NRR5
Bgee:Q9NRR5 CleanEx:HS_UBQLN4 Genevestigator:Q9NRR5
GermOnline:ENSG00000160803 Uniprot:Q9NRR5
Length = 601
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 111/303 (36%), Positives = 164/303 (54%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
+ +IM P+VQ++M+NP++MR++IM NPQM+++++RNPE++H+LN+P +RQT+E ARNP
Sbjct: 196 LSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 255
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP +A GN NPF++L
Sbjct: 256 AMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAARE--QFGN---NPFSSLA 310
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDAR 180
G + ++ N PLPNPW + G
Sbjct: 311 GNSDSSSSQPLRTE---------------NREPLPNPWSPSPPTSQAPGSGGEGTGGSGT 355
Query: 181 PQT------PAGI--AGLSSPGFE--DIFGAMQDTNSLNQMLQN----PAVTQMMQSLLS 226
Q P GI A L S F ++ +Q + Q++QN P + MMQ+L
Sbjct: 356 SQVHPTVSNPFGINAASLGSGMFNSPEMQALLQQISENPQLMQNVISAPYMRSMMQTLAQ 415
Query: 227 NPQYMNQIL------GLNPQLRSMVDSNSQL-REMIQNPEFLRQLTNPETMQQMVTLQQF 279
NP + Q++ NPQL+ + + + +QNPE L LTNP MQ ++ +QQ
Sbjct: 416 NPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALLQIQQG 475
Query: 280 LLT 282
L T
Sbjct: 476 LQT 478
Score = 160 (61.4 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 71/283 (25%), Positives = 113/283 (39%)
Query: 11 QNLMNNPEIMRNLIMNNPQMREIIDRNPELA-HILNDPSTLRQTLEAARNPELMREMMRN 69
+ LM+NPE++ IM NP +++++ NP+L H++ ++Q +E RNPE+ M+ N
Sbjct: 187 RQLMSNPEMLSQ-IMENPLVQDMMS-NPDLMRHMIMANPQMQQLME--RNPEISH-MLNN 241
Query: 70 TDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG--NA----GNDNSNPFAALLGTQ 123
+ +E + M++ M N S+ G NA D P + Q
Sbjct: 242 PELMRQTMELARNPA-MMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQ 300
Query: 124 GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARPQT 183
GN N PLPNPW + G Q
Sbjct: 301 FGNNP--FSSLAGNSDSSSSQPLRTENREPLPNPWSPSPPTSQAPGSGGEGTGGSGTSQV 358
Query: 184 PAGIAGLSSPGFEDIFGAMQDTNSLNQ-MLQNPAVTQMMQSLLSNPQYMNQILGLNPQLR 242
+ S+P FG + SL M +P + ++Q + NPQ M ++ P +R
Sbjct: 359 HPTV---SNP-----FGI--NAASLGSGMFNSPEMQALLQQISENPQLMQNVISA-PYMR 407
Query: 243 SMVDSNSQLREMIQNPEFLRQL-TNPETMQQMVTLQQFLLTQL 284
SM+ + + QNP+F Q+ N LQ+ L QL
Sbjct: 408 SMMQT------LAQNPDFAAQMMVNVPLFAGNPQLQEQLRLQL 444
Score = 143 (55.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 186 GIAGLSSPGFEDIFGAMQ-----DTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQ 240
G GL S F ++ MQ + L+Q+++NP V MM SNP M ++ NPQ
Sbjct: 169 GSLGLGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQDMM----SNPDLMRHMIMANPQ 224
Query: 241 LRSMVDSNSQLREMIQNPEFLRQLT----NPETMQQMVTLQQFLLTQL 284
++ +++ N ++ M+ NPE +RQ NP MQ+M+ Q L+ L
Sbjct: 225 MQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNL 272
>UNIPROTKB|F1RLP9 [details] [associations]
symbol:UBQLN4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032434 "regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031597 "cytosolic
proteasome complex" evidence=IEA] [GO:0031595 "nuclear proteasome
complex" evidence=IEA] [GO:0031593 "polyubiquitin binding"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
GO:GO:0005789 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934 GO:GO:0032434
KO:K04523 InterPro:IPR006636 InterPro:IPR015496 PANTHER:PTHR10677
SMART:SM00727 GeneTree:ENSGT00390000005720 GO:GO:0031597
GO:GO:0031595 CTD:56893 OMA:FGMSRTT EMBL:CU151868 EMBL:CU302298
RefSeq:XP_003125749.1 Ensembl:ENSSSCT00000007119 GeneID:100519020
KEGG:ssc:100519020 Uniprot:F1RLP9
Length = 601
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 111/303 (36%), Positives = 164/303 (54%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
+ +IM P+VQ++M+NP++MR++IM NPQM+++++RNPE++H+LN+P +RQT+E ARNP
Sbjct: 196 LSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 255
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP +A GN NPF++L
Sbjct: 256 AMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAARE--QFGN---NPFSSLA 310
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDAR 180
G + ++ N PLPNPW + G
Sbjct: 311 GNSDSSSSQPLRTE---------------NREPLPNPWSPSPPTSQAPGSGGEGTGGSGT 355
Query: 181 PQT------PAGI--AGLSSPGFE--DIFGAMQDTNSLNQMLQN----PAVTQMMQSLLS 226
Q P GI A L S F ++ +Q + Q++QN P + MMQ+L
Sbjct: 356 SQVHPTVSNPFGINAASLGSGMFNSPEMQALLQQISENPQLMQNVISAPYMRSMMQTLAQ 415
Query: 227 NPQYMNQIL------GLNPQLRSMVDSNSQL-REMIQNPEFLRQLTNPETMQQMVTLQQF 279
NP + Q++ NPQL+ + + + +QNPE L LTNP MQ ++ +QQ
Sbjct: 416 NPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALLQIQQG 475
Query: 280 LLT 282
L T
Sbjct: 476 LQT 478
Score = 160 (61.4 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 71/283 (25%), Positives = 113/283 (39%)
Query: 11 QNLMNNPEIMRNLIMNNPQMREIIDRNPELA-HILNDPSTLRQTLEAARNPELMREMMRN 69
+ LM+NPE++ IM NP +++++ NP+L H++ ++Q +E RNPE+ M+ N
Sbjct: 187 RQLMSNPEMLSQ-IMENPLVQDMMS-NPDLMRHMIMANPQMQQLME--RNPEISH-MLNN 241
Query: 70 TDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG--NA----GNDNSNPFAALLGTQ 123
+ +E + M++ M N S+ G NA D P + Q
Sbjct: 242 PELMRQTMELARNPA-MMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQ 300
Query: 124 GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARPQT 183
GN N PLPNPW + G Q
Sbjct: 301 FGNNP--FSSLAGNSDSSSSQPLRTENREPLPNPWSPSPPTSQAPGSGGEGTGGSGTSQV 358
Query: 184 PAGIAGLSSPGFEDIFGAMQDTNSLNQ-MLQNPAVTQMMQSLLSNPQYMNQILGLNPQLR 242
+ S+P FG + SL M +P + ++Q + NPQ M ++ P +R
Sbjct: 359 HPTV---SNP-----FGI--NAASLGSGMFNSPEMQALLQQISENPQLMQNVISA-PYMR 407
Query: 243 SMVDSNSQLREMIQNPEFLRQL-TNPETMQQMVTLQQFLLTQL 284
SM+ + + QNP+F Q+ N LQ+ L QL
Sbjct: 408 SMMQT------LAQNPDFAAQMMVNVPLFAGNPQLQEQLRLQL 444
Score = 143 (55.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 186 GIAGLSSPGFEDIFGAMQ-----DTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQ 240
G GL S F ++ MQ + L+Q+++NP V MM SNP M ++ NPQ
Sbjct: 169 GSLGLGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQDMM----SNPDLMRHMIMANPQ 224
Query: 241 LRSMVDSNSQLREMIQNPEFLRQLT----NPETMQQMVTLQQFLLTQL 284
++ +++ N ++ M+ NPE +RQ NP MQ+M+ Q L+ L
Sbjct: 225 MQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNL 272
>RGD|620745 [details] [associations]
symbol:Ubqln1 "ubiquilin 1" species:10116 "Rattus norvegicus"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=ISO;ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO;ISS;IDA] [GO:0005783
"endoplasmic reticulum" evidence=ISO;ISS] [GO:0006915 "apoptotic
process" evidence=ISO;ISS] [GO:0019900 "kinase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0031396 "regulation of protein ubiquitination"
evidence=ISO;ISS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO;ISS]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR009060
Pfam:PF00240 Pfam:PF00627 SMART:SM00213 RGD:620745 Prosite:PS00299
GO:GO:0005783 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0001666 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
GO:GO:0000502 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0031396
SUPFAM:SSF46934 PDB:1KJV PDBsum:1KJV eggNOG:COG5272 KO:K04523
InterPro:IPR006636 InterPro:IPR015496 PANTHER:PTHR10677
SMART:SM00727 CTD:29979 HOVERGEN:HBG064537 OrthoDB:EOG48KRBD
EMBL:D87950 EMBL:BC072477 IPI:IPI00421876 RefSeq:NP_446199.2
UniGene:Rn.94864 ProteinModelPortal:Q9JJP9 SMR:Q9JJP9 STRING:Q9JJP9
PRIDE:Q9JJP9 GeneID:114590 KEGG:rno:114590 UCSC:RGD:620745
HOGENOM:HOG000234878 EvolutionaryTrace:Q9JJP9 NextBio:618741
ArrayExpress:Q9JJP9 Genevestigator:Q9JJP9 Uniprot:Q9JJP9
Length = 582
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 109/296 (36%), Positives = 161/296 (54%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P+ +RQTLE ARNP
Sbjct: 177 MVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPNIMRQTLELARNP 236
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN +R +SN+ES P G+N LRRMY +QEP LNA G NPFA+L+
Sbjct: 237 AMMQEMMRNQERDLSNLESIPGGYNALRRMYTDIQEPMLNAAQE--QFGG---NPFASLV 291
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSS---LG 177
+ + P ++P +S+ G
Sbjct: 292 SSPSSAEGTQPSRTENRDPLPNPWAPQTPQSSPASGSTGSTTNTVSTSAGNATSTPAGQG 351
Query: 178 DARPQ-TP-AGIAGLSSPGFEDIFGAMQDTNSLNQ-MLQNPAVTQMMQSLLSNP----QY 230
+ P P AG + ++PG + + + + L Q ML P + MMQSL NP Q
Sbjct: 352 TSGPNLVPGAGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQM 411
Query: 231 M--NQILGLNPQLRSMVDSN--SQLREMIQNPEFLRQLTNPETMQQMVTLQQFLLT 282
M N + NPQL+ + + L++M QNP+ L ++NP MQ ++ +QQ L T
Sbjct: 412 MLNNPLFAGNPQLQEQMRQQLPTFLQQM-QNPDTLSAMSNPRAMQALLQIQQGLQT 466
Score = 175 (66.7 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 78/293 (26%), Positives = 121/293 (41%)
Query: 11 QNLMNNPEIMRNLIMNNPQMREIIDRNPELAH--ILNDPSTLRQTLEAARNPELMREMMR 68
+ L++NPE+M IM NP ++ ++ NP+L I+ +P ++Q ++ RNPE+ M+
Sbjct: 168 RQLLSNPEMMVQ-IMENPFVQSMLS-NPDLMRQLIMANPQ-MQQLIQ--RNPEISH-MLN 221
Query: 69 NTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG--NA----GNDNSNPFAALLGT 122
N + +E + M++ M + N S+ G NA D P
Sbjct: 222 NPNIMRQTLELARNPA-MMQEMMRNQERDLSNLESIPGGYNALRRMYTDIQEPMLNAAQE 280
Query: 123 Q-GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARP 181
Q GGN N +PLPNPW S+
Sbjct: 281 QFGGNP--FASLVSSPSSAEGTQPSRTENRDPLPNPWAPQTPQSSPASGSTGSTTNTV-- 336
Query: 182 QTPAGIAGLSSPGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQL 241
T AG A S+P + G + M P + ++Q + NPQ M +L P +
Sbjct: 337 STSAGNA-TSTPAGQGTSGPNLVPGAGASMFNTPGMQSLLQQITENPQLMQNMLSA-PYM 394
Query: 242 RSMVDSNSQ-----LREMIQNPEFLRQLTNPETMQQMVTLQQFLLTQLGRAQS 289
RSM+ S SQ + M+ NP F NP+ +QM +Q L T L + Q+
Sbjct: 395 RSMMQSLSQNPDLAAQMMLNNPLFAG---NPQLQEQM---RQQLPTFLQQMQN 441
>UNIPROTKB|G5E628 [details] [associations]
symbol:UBQLN2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 InterPro:IPR016024 Pfam:PF00240 Pfam:PF00627
SMART:SM00213 GO:GO:0005886 GO:GO:0005737 SUPFAM:SSF48371
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 KO:K04523 InterPro:IPR006636
InterPro:IPR015496 PANTHER:PTHR10677 SMART:SM00727
GeneTree:ENSGT00390000005720 CTD:29978 OMA:NRPQGQS
EMBL:DAAA02073353 RefSeq:NP_001192611.1 UniGene:Bt.62986
ProteinModelPortal:G5E628 Ensembl:ENSBTAT00000029117 GeneID:539529
KEGG:bta:539529 NextBio:20878050 Uniprot:G5E628
Length = 624
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 111/302 (36%), Positives = 157/302 (51%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P +RQTLE ARNP
Sbjct: 182 MIQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNP 241
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN D A+SN+ES P G+N LRRMY +QEP LNA NPFA++
Sbjct: 242 AMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQE-----QFGGNPFASVG 296
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWM--------XXXXXXXXXXXXR 172
+ + N +PLPNPW
Sbjct: 297 SSSSSGEG--------------TQPSRTENRDPLPNPWAPPPATQSSATTSTTTSSGSGS 342
Query: 173 SSSLGDARPQTPAG---IAGL-SSPGFEDIFGAMQDTNSLNQ-MLQNPAVTQMMQSLLSN 227
SS A T A +A + S+PG + + + + L Q ML P + MMQSL N
Sbjct: 343 GSSSSSATGNTVAAANYVASIFSTPGMQSLLQQITENPQLIQNMLSAPYMRSMMQSLSQN 402
Query: 228 P----QYM--NQILGLNPQLRSMVDSN-SQLREMIQNPEFLRQLTNPETMQQMVTLQQFL 280
P Q M + + NPQL+ + + +QNP+ L ++NP MQ ++ +QQ L
Sbjct: 403 PDLAAQMMLNSPVFTTNPQLQEQMRPQLPTFLQQMQNPDTLSAMSNPRAMQALMQIQQGL 462
Query: 281 LT 282
T
Sbjct: 463 QT 464
Score = 166 (63.5 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 71/285 (24%), Positives = 118/285 (41%)
Query: 3 EIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAH--ILNDPSTLRQTLEAARNP 60
E+ N + Q L+++PE+M IM NP ++ ++ NP+L I+ +P ++Q ++ RNP
Sbjct: 166 ELQNQ-MQQQLLSSPEMMIQ-IMENPFVQSMLS-NPDLMRQLIMANPQ-MQQLIQ--RNP 219
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG--NA----GNDNSN 114
E+ ++ N D +E + M++ M N S+ G NA D
Sbjct: 220 EISH-LLNNPDIMRQTLEIARNPA-MMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQE 277
Query: 115 PFAALLGTQ-GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRS 173
P Q GGN N +PLPNPW +
Sbjct: 278 PMLNAAQEQFGGNP--FASVGSSSSSGEGTQPSRTENRDPLPNPWAPPPATQSSATTSTT 335
Query: 174 SSLGDARPQTPAGIAGLSSPGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQYMNQ 233
+S G +G + S+ G + N + + P + ++Q + NPQ +
Sbjct: 336 TSSGSG-----SGSSSSSATG-----NTVAAANYVASIFSTPGMQSLLQQITENPQLIQN 385
Query: 234 ILGLNPQLRSMVDSNSQ-----LREMIQNPEFLRQLTNPETMQQM 273
+L P +RSM+ S SQ + M+ +P F TNP+ +QM
Sbjct: 386 MLSA-PYMRSMMQSLSQNPDLAAQMMLNSPVFT---TNPQLQEQM 426
Score = 153 (58.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 38/110 (34%), Positives = 61/110 (55%)
Query: 186 GIAGLSSPGFEDI-FGAMQDTNSLNQMLQNPAVT-QMM-----QSLLSNPQYMNQILGLN 238
G+AGLSS G F +Q+ Q+L +P + Q+M QS+LSNP M Q++ N
Sbjct: 150 GLAGLSSLGLSSTNFSELQNQMQ-QQLLSSPEMMIQIMENPFVQSMLSNPDLMRQLIMAN 208
Query: 239 PQLRSMVDSNSQLREMIQNPEFLRQLT----NPETMQQMVTLQQFLLTQL 284
PQ++ ++ N ++ ++ NP+ +RQ NP MQ+M+ Q L+ L
Sbjct: 209 PQMQQLIQRNPEISHLLNNPDIMRQTLEIARNPAMMQEMMRNQDLALSNL 258
>FB|FBgn0031057 [details] [associations]
symbol:Ubqn "Ubiquilin" species:7227 "Drosophila
melanogaster" [GO:0042982 "amyloid precursor protein metabolic
process" evidence=IMP] [GO:0070628 "proteasome binding"
evidence=IPI] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
EMBL:AE014298 GO:GO:0042982 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
eggNOG:COG5272 KO:K04523 InterPro:IPR006636 InterPro:IPR015496
PANTHER:PTHR10677 SMART:SM00727 GeneTree:ENSGT00390000005720
EMBL:AY128447 RefSeq:NP_608344.1 UniGene:Dm.11604 HSSP:Q9UHD9
SMR:Q9VWD9 IntAct:Q9VWD9 MINT:MINT-302857 STRING:Q9VWD9
EnsemblMetazoa:FBtr0074750 GeneID:32977 KEGG:dme:Dmel_CG14224
UCSC:CG14224-RA CTD:32977 FlyBase:FBgn0031057 InParanoid:Q9VWD9
OMA:MARNPSM OrthoDB:EOG40RXX4 GenomeRNAi:32977 NextBio:781330
Uniprot:Q9VWD9
Length = 547
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 103/286 (36%), Positives = 156/286 (54%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
+R +M+ P+VQ +MNNP+ MR LI +NPQM +++ RNPE++H+LN+P LRQT+E ARNP
Sbjct: 139 LRSLMDNPMVQQMMNNPDTMRQLITSNPQMHDLMQRNPEISHMLNNPDLLRQTMELARNP 198
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+++E+MR+ DRAMSN+ES P G++ L+R+Y +QEP +NA + + G NPFA L+
Sbjct: 199 SMLQELMRSHDRAMSNLESVPGGYSALQRIYRDIQEPMMNAATES--FGR---NPFAGLV 253
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDAR 180
GG+ A N NPLPNPW S G+
Sbjct: 254 DG-GGSGA------------GNNPQQGTENRNPLPNPW--GGANSGTNGTVGGSGAGNPT 298
Query: 181 PQTPAGIAGLSSPGFEDIFGAMQDTNSLNQMLQN-PAVTQMMQSLLSNPQYMNQILGLNP 239
P L++P + M D ++ Q L N P MM+S+ +P ++L +P
Sbjct: 299 GDLPPNNV-LNTPAMRSLLQQMADNPAMMQNLLNAPYTRSMMESMSQDPDMAARLLSSSP 357
Query: 240 QLRSMVDSNSQLREMI-------QNPEFLRQLTNPETMQQMVTLQQ 278
+ + Q+R+M+ QNPE + LTNP+ M ++ +QQ
Sbjct: 358 LMSNNPALQEQVRQMMPQFMAQMQNPEVMNMLTNPDAMNAILQIQQ 403
Score = 191 (72.3 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 69/288 (23%), Positives = 112/288 (38%)
Query: 20 MRNLIMNNPQM-REIIDRNPELAHILNDPSTLRQTLEA--------ARNPELMREMMRNT 70
M+N ++NN M R ++D NP + ++N+P T+RQ + + RNPE+ M+ N
Sbjct: 128 MQNELLNNGDMLRSLMD-NPMVQQMMNNPDTMRQLITSNPQMHDLMQRNPEISH-MLNNP 185
Query: 71 DRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAG------NDNSNPFAALLGTQG 124
D +E + +ML+ + + N S+ G D P
Sbjct: 186 DLLRQTMELARNP-SMLQELMRSHDRAMSNLESVPGGYSALQRIYRDIQEPMMNAATESF 244
Query: 125 GNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARPQTP 184
G N NPLPNPW S G+ P
Sbjct: 245 GRNPFAGLVDGGGSGAGNNPQQGTENRNPLPNPW--GGANSGTNGTVGGSGAGNPTGDLP 302
Query: 185 AGIAGLSSPGFEDIFGAMQDTNSLNQMLQN-PAVTQMMQSLLSNPQYMNQILGLNPQLRS 243
L++P + M D ++ Q L N P MM+S+ +P ++L +P + +
Sbjct: 303 PNNV-LNTPAMRSLLQQMADNPAMMQNLLNAPYTRSMMESMSQDPDMAARLLSSSPLMSN 361
Query: 244 MVDSNSQLREMIQNPEFLRQLTNPETMQQMVT---LQQFLLTQLGRAQ 288
Q+R+M+ P+F+ Q+ NPE M + + L Q G Q
Sbjct: 362 NPALQEQVRQMM--PQFMAQMQNPEVMNMLTNPDAMNAILQIQQGMEQ 407
Score = 127 (49.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/99 (30%), Positives = 54/99 (54%)
Query: 186 GIAGLSSPG-----FEDIFGAMQDTNSLN-QMLQNPAVTQMMQSLLSNPQYMNQILGLNP 239
G+AG+ + G F D+ MQ+ N ML++ M+Q +++NP M Q++ NP
Sbjct: 107 GLAGMEALGAGSNTFMDLQARMQNELLNNGDMLRSLMDNPMVQQMMNNPDTMRQLITSNP 166
Query: 240 QLRSMVDSNSQLREMIQNPEFLRQLT----NPETMQQMV 274
Q+ ++ N ++ M+ NP+ LRQ NP +Q+++
Sbjct: 167 QMHDLMQRNPEISHMLNNPDLLRQTMELARNPSMLQELM 205
>UNIPROTKB|Q9UHD9 [details] [associations]
symbol:UBQLN2 "Ubiquilin-2" species:9606 "Homo sapiens"
[GO:0008219 "cell death" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 InterPro:IPR016024 Pfam:PF00240 Pfam:PF00627
SMART:SM00213 Prosite:PS00299 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 GO:GO:0008219 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053
Orphanet:803 SUPFAM:SSF46934 eggNOG:COG5272 KO:K04523
InterPro:IPR006636 InterPro:IPR015496 PANTHER:PTHR10677
SMART:SM00727 EMBL:CH471154 HOVERGEN:HBG064537 OrthoDB:EOG48KRBD
HOGENOM:HOG000234878 EMBL:AF189009 EMBL:AF293385 EMBL:AL354793
EMBL:BC069237 EMBL:AL442081 EMBL:AB015344 IPI:IPI00409659
RefSeq:NP_038472.2 UniGene:Hs.179309 PDB:1J8C PDBsum:1J8C
ProteinModelPortal:Q9UHD9 SMR:Q9UHD9 IntAct:Q9UHD9
MINT:MINT-1192483 STRING:Q9UHD9 PhosphoSite:Q9UHD9 DMDM:124056593
PaxDb:Q9UHD9 PeptideAtlas:Q9UHD9 PRIDE:Q9UHD9
Ensembl:ENST00000338222 GeneID:29978 KEGG:hsa:29978 UCSC:uc004dus.3
CTD:29978 GeneCards:GC0XP056606 HGNC:HGNC:12509 HPA:CAB013481
HPA:HPA006431 MIM:300264 MIM:300857 neXtProt:NX_Q9UHD9
PharmGKB:PA37156 InParanoid:Q9UHD9 OMA:NRPQGQS PhylomeDB:Q9UHD9
EvolutionaryTrace:Q9UHD9 GenomeRNAi:29978 NextBio:52728
ArrayExpress:Q9UHD9 Bgee:Q9UHD9 CleanEx:HS_UBQLN2
Genevestigator:Q9UHD9 GermOnline:ENSG00000188021 Uniprot:Q9UHD9
Length = 624
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 110/302 (36%), Positives = 159/302 (52%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P +RQTLE ARNP
Sbjct: 182 MIQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNP 241
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN D A+SN+ES P G+N LRRMY +QEP LNA NPFA++
Sbjct: 242 AMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQE-----QFGGNPFASVG 296
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLG--- 177
+ + N +PLPNPW ++S G
Sbjct: 297 SSSSSGEG--------------TQPSRTENRDPLPNPWAPPPATQSSATTSTTTSTGSGS 342
Query: 178 -----DARPQTPAG---IAGL-SSPGFEDIFGAMQDTNSLNQ-MLQNPAVTQMMQSLLSN 227
+A T A +A + S+PG + + + + L Q ML P + MMQSL N
Sbjct: 343 GNSSSNATGNTVAAANYVASIFSTPGMQSLLQQITENPQLIQNMLSAPYMRSMMQSLSQN 402
Query: 228 PQYMNQIL------GLNPQLRSMVDSN-SQLREMIQNPEFLRQLTNPETMQQMVTLQQFL 280
P Q++ NPQL+ + + +QNP+ L ++NP MQ ++ +QQ L
Sbjct: 403 PDLAAQMMLNSPLFTANPQLQEQMRPQLPAFLQQMQNPDTLSAMSNPRAMQALMQIQQGL 462
Query: 281 LT 282
T
Sbjct: 463 QT 464
Score = 166 (63.5 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 73/279 (26%), Positives = 116/279 (41%)
Query: 11 QNLMNNPEIMRNLIMNNPQMREIIDRNPELAH--ILNDPSTLRQTLEAARNPELMREMMR 68
Q LM +PE+M IM NP ++ ++ NP+L I+ +P ++Q ++ RNPE+ ++
Sbjct: 173 QQLMASPEMMIQ-IMENPFVQSMLS-NPDLMRQLIMANPQ-MQQLIQ--RNPEISH-LLN 226
Query: 69 NTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG--NA----GNDNSNPFAALLGT 122
N D +E + M++ M N S+ G NA D P
Sbjct: 227 NPDIMRQTLEIARNPA-MMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQE 285
Query: 123 Q-GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARP 181
Q GGN N +PLPNPW ++S G
Sbjct: 286 QFGGNP--FASVGSSSSSGEGTQPSRTENRDPLPNPWAPPPATQSSATTSTTTSTGSGSG 343
Query: 182 QTPAGIAG--LSSPGF-EDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNP--QYMNQILG 236
+ + G +++ + IF + L Q+ +NP Q++Q++LS P + M Q L
Sbjct: 344 NSSSNATGNTVAAANYVASIFSTPGMQSLLQQITENP---QLIQNMLSAPYMRSMMQSLS 400
Query: 237 LNPQLRSMVDSNSQLREMIQNPEFLRQLTN--PETMQQM 273
NP L + + NS L NP+ Q+ P +QQM
Sbjct: 401 QNPDLAAQMMLNSPL--FTANPQLQEQMRPQLPAFLQQM 437
Score = 151 (58.2 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 37/111 (33%), Positives = 61/111 (54%)
Query: 185 AGIA--GLSSPGFEDIFGAMQDT-----NSLNQMLQNPAVTQMMQSLLSNPQYMNQILGL 237
AG++ GLSS F ++ MQ + Q+++NP V QS+LSNP M Q++
Sbjct: 152 AGLSSLGLSSTNFSELQSQMQQQLMASPEMMIQIMENPFV----QSMLSNPDLMRQLIMA 207
Query: 238 NPQLRSMVDSNSQLREMIQNPEFLRQLT----NPETMQQMVTLQQFLLTQL 284
NPQ++ ++ N ++ ++ NP+ +RQ NP MQ+M+ Q L+ L
Sbjct: 208 NPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNPAMMQEMMRNQDLALSNL 258
>MGI|MGI:2150152 [details] [associations]
symbol:Ubqln4 "ubiquilin 4" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0031593 "polyubiquitin
binding" evidence=ISO] [GO:0032434 "regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR009060
Pfam:PF00240 Pfam:PF00627 SMART:SM00213 MGI:MGI:2150152
Prosite:PS00299 GO:GO:0005829 GO:GO:0005634 GO:GO:0048471
GO:GO:0005789 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
GO:GO:0031593 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
eggNOG:COG5272 GO:GO:0032434 KO:K04523 InterPro:IPR006636
InterPro:IPR015496 PANTHER:PTHR10677 SMART:SM00727
GeneTree:ENSGT00390000005720 GO:GO:0031597 GO:GO:0031595
HOVERGEN:HBG064537 OrthoDB:EOG48KRBD HOGENOM:HOG000234878 CTD:56893
EMBL:AB040050 EMBL:BC017686 EMBL:AK077511 IPI:IPI00118575
RefSeq:NP_277068.1 UniGene:Mm.303059 UniGene:Mm.472338 PDB:2KNZ
PDBsum:2KNZ ProteinModelPortal:Q99NB8 SMR:Q99NB8 IntAct:Q99NB8
STRING:Q99NB8 PhosphoSite:Q99NB8 PaxDb:Q99NB8 PRIDE:Q99NB8
Ensembl:ENSMUST00000008748 GeneID:94232 KEGG:mmu:94232
UCSC:uc008pvq.1 InParanoid:Q99NB8 OMA:WGATAGQ
EvolutionaryTrace:Q99NB8 NextBio:352243 Bgee:Q99NB8
CleanEx:MM_UBQLN4 Genevestigator:Q99NB8
GermOnline:ENSMUSG00000008604 Uniprot:Q99NB8
Length = 596
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 111/303 (36%), Positives = 164/303 (54%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
+ +IM P+VQ++M+NP++MR++IM NPQM+++++RNPE++H+LN+P +RQT+E ARNP
Sbjct: 191 LSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 250
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP T+ GN NPF++L
Sbjct: 251 AMMQEMMRNQDRALSNLESVPGGYNALRRMYTDIQEPMF--TAAREQFGN---NPFSSLA 305
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDAR 180
G + ++ N PLPNPW + G
Sbjct: 306 GNSDNSSSQPLRTE---------------NREPLPNPWSPSPPTSQAPGSGGEGTGGSGT 350
Query: 181 PQT------PAGI--AGLSSPGFE--DIFGAMQDTNSLNQMLQN----PAVTQMMQSLLS 226
Q P GI A L S F ++ +Q + Q++QN P + MMQ+L
Sbjct: 351 SQVHPTVSNPFGINAASLGSGMFNSPEMQALLQQISENPQLMQNVISAPYMRTMMQTLAQ 410
Query: 227 NPQYMNQIL------GLNPQLRSMVDSNSQL-REMIQNPEFLRQLTNPETMQQMVTLQQF 279
NP + Q++ NPQL+ + + + +QNPE L LTNP MQ ++ +QQ
Sbjct: 411 NPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALLQIQQG 470
Query: 280 LLT 282
L T
Sbjct: 471 LQT 473
Score = 155 (59.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 70/283 (24%), Positives = 112/283 (39%)
Query: 11 QNLMNNPEIMRNLIMNNPQMREIIDRNPELA-HILNDPSTLRQTLEAARNPELMREMMRN 69
+ LM+NPE++ IM NP +++++ NP+L H++ ++Q +E RNPE+ M+ N
Sbjct: 182 RQLMSNPEMLSQ-IMENPLVQDMMS-NPDLMRHMIMANPQMQQLME--RNPEISH-MLNN 236
Query: 70 TDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG--NA----GNDNSNPFAALLGTQ 123
+ +E + M++ M N S+ G NA D P Q
Sbjct: 237 PELMRQTMELARNPA-MMQEMMRNQDRALSNLESVPGGYNALRRMYTDIQEPMFTAAREQ 295
Query: 124 GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARPQT 183
GN N PLPNPW + G Q
Sbjct: 296 FGNNP--FSSLAGNSDNSSSQPLRTENREPLPNPWSPSPPTSQAPGSGGEGTGGSGTSQV 353
Query: 184 PAGIAGLSSPGFEDIFGAMQDTNSLNQ-MLQNPAVTQMMQSLLSNPQYMNQILGLNPQLR 242
+ S+P FG + SL M +P + ++Q + NPQ M ++ P +R
Sbjct: 354 HPTV---SNP-----FGI--NAASLGSGMFNSPEMQALLQQISENPQLMQNVISA-PYMR 402
Query: 243 SMVDSNSQLREMIQNPEFLRQL-TNPETMQQMVTLQQFLLTQL 284
+M+ + + QNP+F Q+ N LQ+ L QL
Sbjct: 403 TMMQT------LAQNPDFAAQMMVNVPLFAGNPQLQEQLRLQL 439
Score = 143 (55.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 186 GIAGLSSPGFEDIFGAMQ-----DTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQ 240
G GL S F ++ MQ + L+Q+++NP V MM SNP M ++ NPQ
Sbjct: 164 GSLGLGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQDMM----SNPDLMRHMIMANPQ 219
Query: 241 LRSMVDSNSQLREMIQNPEFLRQLT----NPETMQQMVTLQQFLLTQL 284
++ +++ N ++ M+ NPE +RQ NP MQ+M+ Q L+ L
Sbjct: 220 MQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNL 267
>RGD|1308273 [details] [associations]
symbol:Ubqln4 "ubiquilin 4" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA;ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0031593 "polyubiquitin binding" evidence=IEA;ISO]
[GO:0031595 "nuclear proteasome complex" evidence=IEA;ISO]
[GO:0031597 "cytosolic proteasome complex" evidence=IEA;ISO]
[GO:0032434 "regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] InterPro:IPR000449
InterPro:IPR000626 InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627
SMART:SM00213 RGD:1308273 GO:GO:0005789 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053
SUPFAM:SSF46934 GO:GO:0032434 KO:K04523 InterPro:IPR006636
InterPro:IPR015496 PANTHER:PTHR10677 SMART:SM00727
GeneTree:ENSGT00390000005720 EMBL:CH473976 GO:GO:0031597
GO:GO:0031595 OrthoDB:EOG48KRBD CTD:56893 OMA:WGATAGQ
IPI:IPI00203373 RefSeq:NP_001101158.1 UniGene:Rn.17785
Ensembl:ENSRNOT00000026994 GeneID:310633 KEGG:rno:310633
UCSC:RGD:1308273 NextBio:662270 Uniprot:D4A3P1
Length = 595
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 111/303 (36%), Positives = 164/303 (54%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
+ +IM P+VQ++M+NP++MR++IM NPQM+++++RNPE++H+LN+P +RQT+E ARNP
Sbjct: 190 LSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 249
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP T+ GN NPF++L
Sbjct: 250 AMMQEMMRNQDRALSNLESVPGGYNALRRMYTDIQEPMF--TAAREQFGN---NPFSSLA 304
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDAR 180
G + ++ N PLPNPW + G
Sbjct: 305 GNSDNSSSQPLRTE---------------NREPLPNPWSPSPPTSQAPGSGGEGTGGSGT 349
Query: 181 PQT------PAGI--AGLSSPGFE--DIFGAMQDTNSLNQMLQN----PAVTQMMQSLLS 226
Q P GI A L S F ++ +Q + Q++QN P + MMQ+L
Sbjct: 350 SQVHPTVSNPFGINAASLGSGMFNSPEMQALLQQISENPQLMQNVISAPYMRTMMQTLAQ 409
Query: 227 NPQYMNQIL------GLNPQLRSMVDSNSQL-REMIQNPEFLRQLTNPETMQQMVTLQQF 279
NP + Q++ NPQL+ + + + +QNPE L LTNP MQ ++ +QQ
Sbjct: 410 NPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALLQIQQG 469
Query: 280 LLT 282
L T
Sbjct: 470 LQT 472
Score = 155 (59.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 70/283 (24%), Positives = 112/283 (39%)
Query: 11 QNLMNNPEIMRNLIMNNPQMREIIDRNPELA-HILNDPSTLRQTLEAARNPELMREMMRN 69
+ LM+NPE++ IM NP +++++ NP+L H++ ++Q +E RNPE+ M+ N
Sbjct: 181 RQLMSNPEMLSQ-IMENPLVQDMMS-NPDLMRHMIMANPQMQQLME--RNPEISH-MLNN 235
Query: 70 TDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG--NA----GNDNSNPFAALLGTQ 123
+ +E + M++ M N S+ G NA D P Q
Sbjct: 236 PELMRQTMELARNPA-MMQEMMRNQDRALSNLESVPGGYNALRRMYTDIQEPMFTAAREQ 294
Query: 124 GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARPQT 183
GN N PLPNPW + G Q
Sbjct: 295 FGNNP--FSSLAGNSDNSSSQPLRTENREPLPNPWSPSPPTSQAPGSGGEGTGGSGTSQV 352
Query: 184 PAGIAGLSSPGFEDIFGAMQDTNSLNQ-MLQNPAVTQMMQSLLSNPQYMNQILGLNPQLR 242
+ S+P FG + SL M +P + ++Q + NPQ M ++ P +R
Sbjct: 353 HPTV---SNP-----FGI--NAASLGSGMFNSPEMQALLQQISENPQLMQNVISA-PYMR 401
Query: 243 SMVDSNSQLREMIQNPEFLRQL-TNPETMQQMVTLQQFLLTQL 284
+M+ + + QNP+F Q+ N LQ+ L QL
Sbjct: 402 TMMQT------LAQNPDFAAQMMVNVPLFAGNPQLQEQLRLQL 438
Score = 143 (55.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 186 GIAGLSSPGFEDIFGAMQ-----DTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQ 240
G GL S F ++ MQ + L+Q+++NP V MM SNP M ++ NPQ
Sbjct: 163 GSLGLGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQDMM----SNPDLMRHMIMANPQ 218
Query: 241 LRSMVDSNSQLREMIQNPEFLRQLT----NPETMQQMVTLQQFLLTQL 284
++ +++ N ++ M+ NPE +RQ NP MQ+M+ Q L+ L
Sbjct: 219 MQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNL 266
>UNIPROTKB|F1N6D3 [details] [associations]
symbol:F1N6D3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032434 "regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031597 "cytosolic
proteasome complex" evidence=IEA] [GO:0031595 "nuclear proteasome
complex" evidence=IEA] [GO:0031593 "polyubiquitin binding"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
GO:GO:0005789 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934 GO:GO:0032434
InterPro:IPR006636 InterPro:IPR015496 PANTHER:PTHR10677
SMART:SM00727 GeneTree:ENSGT00390000005720 GO:GO:0031597
GO:GO:0031595 EMBL:DAAA02007146 IPI:IPI00732368
Ensembl:ENSBTAT00000002028 OMA:ERNPEIN Uniprot:F1N6D3
Length = 612
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 112/303 (36%), Positives = 166/303 (54%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
+ +IM P+VQ++M+NP++MR++IM NPQM+++++RNPE++H+LN+P +RQT+E ARNP
Sbjct: 207 LSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 266
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP +A GN NPF++L
Sbjct: 267 AMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAARE--QFGN---NPFSSLA 321
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXX--XXXXXXXXXXRSSSLGD 178
G + ++ N PLPNPW + G
Sbjct: 322 GNSDSSSSQPLRTE---------------NREPLPNPWSPSPPASQAPGSGGEGAGGSGA 366
Query: 179 AR--P--QTPAGI--AGLSSPGFE--DIFGAMQDTNSLNQMLQN----PAVTQMMQSLLS 226
+R P P GI A L S F ++ +Q + Q++QN P + MMQ+L
Sbjct: 367 SRVHPTVSNPFGINAASLGSGMFNSPEMQALLQQISENPQLMQNVISAPYMRSMMQTLAQ 426
Query: 227 NPQYMNQIL------GLNPQLRSMVDSNSQL-REMIQNPEFLRQLTNPETMQQMVTLQQF 279
NP + Q++ NPQL+ + + + +QNPE L LTNP MQ ++ +QQ
Sbjct: 427 NPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALLQIQQG 486
Query: 280 LLT 282
L T
Sbjct: 487 LQT 489
Score = 159 (61.0 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 74/285 (25%), Positives = 116/285 (40%)
Query: 11 QNLMNNPEIMRNLIMNNPQMREIIDRNPELA-HILNDPSTLRQTLEAARNPELMREMMRN 69
+ LM+NPE++ IM NP +++++ NP+L H++ ++Q +E RNPE+ M+ N
Sbjct: 198 RQLMSNPEMLSQ-IMENPLVQDMMS-NPDLMRHMIMANPQMQQLME--RNPEISH-MLNN 252
Query: 70 TDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG--NA----GNDNSNPFAALLGTQ 123
+ +E + M++ M N S+ G NA D P + Q
Sbjct: 253 PELMRQTMELARNPA-MMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQ 311
Query: 124 GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARPQT 183
GN N PLPNPW S G+
Sbjct: 312 FGNNP--FSSLAGNSDSSSSQPLRTENREPLPNPWSPSPPASQA-----PGSGGEG---- 360
Query: 184 PAGIAGLSS--PGFEDIFGAMQDTNSLNQ-MLQNPAVTQMMQSLLSNPQYMNQILGLNPQ 240
AG +G S P + FG + SL M +P + ++Q + NPQ M ++ P
Sbjct: 361 -AGGSGASRVHPTVSNPFGI--NAASLGSGMFNSPEMQALLQQISENPQLMQNVISA-PY 416
Query: 241 LRSMVDSNSQLREMIQNPEFLRQL-TNPETMQQMVTLQQFLLTQL 284
+RSM+ + + QNP+F Q+ N LQ+ L QL
Sbjct: 417 MRSMMQT------LAQNPDFAAQMMVNVPLFAGNPQLQEQLRLQL 455
Score = 143 (55.4 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 36/108 (33%), Positives = 57/108 (52%)
Query: 186 GIAGLSSPGFEDIFGAMQ-----DTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQ 240
G GL S F ++ MQ + L+Q+++NP V MM SNP M ++ NPQ
Sbjct: 180 GSLGLGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQDMM----SNPDLMRHMIMANPQ 235
Query: 241 LRSMVDSNSQLREMIQNPEFLRQLT----NPETMQQMVTLQQFLLTQL 284
++ +++ N ++ M+ NPE +RQ NP MQ+M+ Q L+ L
Sbjct: 236 MQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNL 283
>RGD|1563566 [details] [associations]
symbol:Ubqln2 "ubiquilin 2" species:10116 "Rattus norvegicus"
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 InterPro:IPR016024 Pfam:PF00240 Pfam:PF00627
SMART:SM00213 RGD:1563566 GO:GO:0005886 GO:GO:0005737
SUPFAM:SSF48371 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934 KO:K04523
InterPro:IPR006636 InterPro:IPR015496 PANTHER:PTHR10677
SMART:SM00727 GeneTree:ENSGT00390000005720 OrthoDB:EOG48KRBD
CTD:29978 EMBL:CH474063 IPI:IPI00362791 RefSeq:NP_001101721.1
UniGene:Rn.23446 Ensembl:ENSRNOT00000026214 GeneID:317396
KEGG:rno:317396 UCSC:RGD:1563566 NextBio:671733 Uniprot:D4AA63
Length = 638
Score = 438 (159.2 bits), Expect = 3.8e-41, P = 3.8e-41
Identities = 112/304 (36%), Positives = 157/304 (51%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P +RQTLE ARNP
Sbjct: 194 MIQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNP 253
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN D A+SN+ES P G+N LRRMY +QEP LNA NPFA
Sbjct: 254 AMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQE-----QFGGNPFA--- 305
Query: 121 GTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWM---XXXXXXXXXXXXRSSSL- 176
T G + + N +PLPNPW SS
Sbjct: 306 -TVGSSSS----------SGEGTQPSRTENRDPLPNPWAPPPTTQTSATTTTTTTSSGTV 354
Query: 177 -GDARPQTPAG--------IAGL-SSPGFEDIFGAMQDTNSLNQ-MLQNPAVTQMMQSLL 225
G T AG +A + S+PG + + + + L Q ML P + MMQSL
Sbjct: 355 AGSNTSSTTAGNTMAAANYVASIFSTPGMQSLLQQITENPQLIQNMLSAPYMRSMMQSLS 414
Query: 226 SNPQYMNQIL------GLNPQLRSMVDSN-SQLREMIQNPEFLRQLTNPETMQQMVTLQQ 278
NP Q++ NPQL+ + + +Q+PE + ++NP MQ ++ +QQ
Sbjct: 415 QNPDMAAQMMLSSPLFTANPQLQEQMRPQLPNFLQQMQSPETIAAMSNPRAMQALLQIQQ 474
Query: 279 FLLT 282
L T
Sbjct: 475 GLQT 478
Score = 155 (59.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 75/289 (25%), Positives = 117/289 (40%)
Query: 3 EIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAH--ILNDPSTLRQTLEAARNP 60
E+ N + Q L+ +PE+M IM NP ++ ++ NP+L I+ +P ++Q ++ RNP
Sbjct: 178 ELQNQ-MQQQLLASPEMMIQ-IMENPFVQSMLS-NPDLMRQLIMANPQ-MQQLIQ--RNP 231
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG--NA----GNDNSN 114
E+ ++ N D +E + M++ M N S+ G NA D
Sbjct: 232 EISH-LLNNPDIMRQTLEIARNPA-MMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQE 289
Query: 115 PFAALLGTQ-GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWM---XXXXXXXXXXX 170
P Q GGN N +PLPNPW
Sbjct: 290 PMLNAAQEQFGGNP--FATVGSSSSSGEGTQPSRTENRDPLPNPWAPPPTTQTSATTTTT 347
Query: 171 XRSSSL--GDARPQTPAGIAGLSSPGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNP 228
SS G T AG ++ IF + L Q+ +NP Q++Q++LS P
Sbjct: 348 TTSSGTVAGSNTSSTTAGNTMAAANYVASIFSTPGMQSLLQQITENP---QLIQNMLSAP 404
Query: 229 --QYMNQILGLNPQLRSMVDSNSQLREMIQNPEFLRQLTN--PETMQQM 273
+ M Q L NP + + + +S L NP+ Q+ P +QQM
Sbjct: 405 YMRSMMQSLSQNPDMAAQMMLSSPL--FTANPQLQEQMRPQLPNFLQQM 451
Score = 149 (57.5 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 39/121 (32%), Positives = 63/121 (52%)
Query: 173 SSSLGDARPQTPAGIAGLSSPGFEDIFGAMQDT-----NSLNQMLQNPAVTQMMQSLLSN 227
SS+LG G GL+S F ++ MQ + Q+++NP V QS+LSN
Sbjct: 155 SSNLG-LGSLASLGNLGLNSSNFTELQNQMQQQLLASPEMMIQIMENPFV----QSMLSN 209
Query: 228 PQYMNQILGLNPQLRSMVDSNSQLREMIQNPEFLRQLT----NPETMQQMVTLQQFLLTQ 283
P M Q++ NPQ++ ++ N ++ ++ NP+ +RQ NP MQ+M+ Q L+
Sbjct: 210 PDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNPAMMQEMMRNQDLALSN 269
Query: 284 L 284
L
Sbjct: 270 L 270
>DICTYBASE|DDB_G0267452 [details] [associations]
symbol:sonA "ubiquilin domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
dictyBase:DDB_G0267452 Prosite:PS00299 GO:GO:0007275
GenomeReviews:CM000150_GR GO:GO:0045335 EMBL:AAFI02000003
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 eggNOG:COG5272 KO:K04523
InterPro:IPR006636 InterPro:IPR015496 PANTHER:PTHR10677
SMART:SM00727 InterPro:IPR019956 PRINTS:PR00348 EMBL:AF214118
RefSeq:XP_647439.1 HSSP:P48510 ProteinModelPortal:Q9NIF3
STRING:Q9NIF3 EnsemblProtists:DDB0191158 GeneID:8616246
KEGG:ddi:DDB_G0267452 OMA:NPWASMF ProtClustDB:CLSZ2742967
Uniprot:Q9NIF3
Length = 523
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 106/310 (34%), Positives = 160/310 (51%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
++E+ N ++ +L++NP+I R+++M NP+MRE+++ NPE+A +L+DP LRQ+LE RNP
Sbjct: 113 IQEMFNSRMMDSLLDNPDIFRDMMMGNPEMREVLNNNPEMAQMLSDPRQLRQSLEMMRNP 172
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSM-AGNAGNDNSNPFAAL 119
ELMREMMRN DRAM NIE+ PEGFN+LRRMY +QEP +NA + A + NSNP
Sbjct: 173 ELMREMMRNADRAMINIENHPEGFNLLRRMYTDIQEPLMNAANQQAASQNQTNSNPIQTN 232
Query: 120 LGTQGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLP---------NPWMXXXXXXXXXXX 170
+Q +P++ P NPW
Sbjct: 233 TDANPNSQPLPNPWSTNSSSTSSNPTSSSPSSRPTTGSSTNTGASNPWASMFSGGGGGMG 292
Query: 171 XRSSSLGDARPQTPAGIAGLSSPGFEDIFGA----MQDTNSLNQML-QNPAVTQMMQSLL 225
+++ G + G S+P + +FG M + ML +P + +Q LL
Sbjct: 293 GGTNNTGTNNTGSTNN-TGASNP-WASMFGGGGGGMGGMGGMEGMLGMDP---ERVQQLL 347
Query: 226 SNP--QYMNQILGLNP-QLRSMVDSNSQLREMIQ-NPEFLRQLTNPETMQQMVTLQQF-L 280
+NP Q M Q L +P ++ M+ N QLR+M+ NP+ + NPE + M +
Sbjct: 348 NNPVAQQMMQRLMSDPAMMQQMITMNPQLRQMMDSNPQLREAMNNPEFLNMMTNPENMNA 407
Query: 281 LTQLGRAQST 290
+ QL +A T
Sbjct: 408 MMQLQQAMGT 417
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 196 EDIFGAMQDTNSL--NQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQLRSMVDSNSQLRE 253
+ I G Q+ N + N M+Q ++MM SLL NP ++ NP++R ++++N ++ +
Sbjct: 95 QGIPGVPQNINDMMNNPMIQEMFNSRMMDSLLDNPDIFRDMMMGNPEMREVLNNNPEMAQ 154
Query: 254 MIQNPEFLRQ----LTNPETMQQMV 274
M+ +P LRQ + NPE M++M+
Sbjct: 155 MLSDPRQLRQSLEMMRNPELMREMM 179
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 57/266 (21%), Positives = 104/266 (39%)
Query: 13 LMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPST-LRQTLEAARNPELMREMMRNTD 71
+M NPE+MR ++ N + I+ +PE ++L T +++ L A N + + N++
Sbjct: 168 MMRNPELMREMMRNADRAMINIENHPEGFNLLRRMYTDIQEPLMNAANQQAASQNQTNSN 227
Query: 72 RAMSNIESSPEGFNMLRRMYETVQEPFLNATSMA-------GNAGNDN-SNPFAALLGTQ 123
+N +++P + N TS + G++ N SNP+A++
Sbjct: 228 PIQTNTDANPNSQPLPNPWSTNSSSTSSNPTSSSPSSRPTTGSSTNTGASNPWASMFSGG 287
Query: 124 GGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARPQT 183
GG + N NPW G
Sbjct: 288 GGGMG-------GGTNNTGTNNTGSTNNTGASNPWASMFGGGGGGMGGMGGMEG-MLGMD 339
Query: 184 PAGIAGL-SSPGFEDIFGA-MQDTNSLNQML-QNPAVTQMMQSLLSNPQYMNQILGLNPQ 240
P + L ++P + + M D + QM+ NP + QMM S NPQ + + + NP+
Sbjct: 340 PERVQQLLNNPVAQQMMQRLMSDPAMMQQMITMNPQLRQMMDS---NPQ-LREAMN-NPE 394
Query: 241 LRSMVDSNSQLREMIQNPEFLRQLTN 266
+M+ + + M+Q + + L N
Sbjct: 395 FLNMMTNPENMNAMMQLQQAMGTLRN 420
Score = 115 (45.5 bits), Expect = 0.00056, P = 0.00056
Identities = 66/288 (22%), Positives = 116/288 (40%)
Query: 17 PEIMRNL--IMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAM 74
P + +N+ +MNNP ++E+ + + +L++P R + NPE MRE++ N M
Sbjct: 98 PGVPQNINDMMNNPMIQEMFNSRM-MDSLLDNPDIFRDMMMG--NPE-MREVLNNNPE-M 152
Query: 75 SNIESSP----EGFNMLRRMYETVQEPFLNATSMAGNAGN--DNSNPFAALLGT------ 122
+ + S P + M+R E ++E NA N N + N +
Sbjct: 153 AQMLSDPRQLRQSLEMMRNP-ELMREMMRNADRAMINIENHPEGFNLLRRMYTDIQEPLM 211
Query: 123 QGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXXRSSSLGDARPQ 182
NQ + PN+ PLPNPW S S +RP
Sbjct: 212 NAANQ-QAASQNQTNSNPIQTNTDANPNSQPLPNPWSTNSSSTSSNPTSSSPS---SRPT 267
Query: 183 TPAGI-AGLSSP-------GFEDIFGAMQDTNSLNQ-MLQNPAVTQMMQSLLSNPQY-MN 232
T + G S+P G + G +T + N N + S+ M
Sbjct: 268 TGSSTNTGASNPWASMFSGGGGGMGGGTNNTGTNNTGSTNNTGASNPWASMFGGGGGGMG 327
Query: 233 QILGLNPQLRSMVDSNSQLREMIQNP---EFLRQL-TNPETMQQMVTL 276
+ G+ L +D ++++++ NP + +++L ++P MQQM+T+
Sbjct: 328 GMGGMEGMLG--MDPE-RVQQLLNNPVAQQMMQRLMSDPAMMQQMITM 372
>MGI|MGI:3045291 [details] [associations]
symbol:Ubqln3 "ubiquilin 3" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
MGI:MGI:3045291 Prosite:PS00299 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
eggNOG:COG5272 KO:K04523 InterPro:IPR006636 InterPro:IPR015496
PANTHER:PTHR10677 SMART:SM00727 GeneTree:ENSGT00390000005720
HOVERGEN:HBG064537 HOGENOM:HOG000234878 EMBL:AK077072
IPI:IPI00271654 RefSeq:NP_941025.1 UniGene:Mm.334092
ProteinModelPortal:Q8C5U9 SMR:Q8C5U9 PhosphoSite:Q8C5U9
PRIDE:Q8C5U9 Ensembl:ENSMUST00000057254 GeneID:244178
KEGG:mmu:244178 CTD:50613 InParanoid:Q8C5U9 OMA:DIMDPML
OrthoDB:EOG4DZ1TW NextBio:386139 Bgee:Q8C5U9 CleanEx:MM_UBQLN3
Genevestigator:Q8C5U9 GermOnline:ENSMUSG00000051618 Uniprot:Q8C5U9
Length = 658
Score = 305 (112.4 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 84/277 (30%), Positives = 128/277 (46%)
Query: 3 EIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPEL 62
++++ P +Q L++N ++R L+++NP M+ +I +NPE+ HILN+P +RQT+E RNP +
Sbjct: 170 QLVDDPFIQGLLSNTGLVRQLVLDNPHMQHLIQQNPEIGHILNNPEIMRQTMEFLRNPSM 229
Query: 63 MREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALLGT 122
M+EMMR+ DRA+SN+ES P G+N+LR MY + +P LNA NPF
Sbjct: 230 MQEMMRSQDRALSNLESIPGGYNVLRTMYTDIMDPMLNAVQE-----QFGGNPFVT---- 280
Query: 123 QGGNQARXXXXXXXXXXXXXXXXXXAPNTNPLPNPWMXXXXXXXXXXXX--RSSSLGDAR 180
N +PLPNPW R S DA
Sbjct: 281 ----------ATTASTTTTSSQPSRTENCDPLPNPWTSTYGVSGGRQGRGGRQSGDQDAS 330
Query: 181 PQTPAGIAGLSSPGFEDIFGAMQDTN-SLNQMLQN--PAVTQMMQSLLSNPQYMNQILGL 237
+ L + G D + +T+ SL LQ P +S LS + + L
Sbjct: 331 ENRNRLPSFLGNIGLFDYLQQLHETSQSLESYLQGTVPTSNPSQESPLSGNR-VPPTLPS 389
Query: 238 NPQL---RSMVDSNSQLREMIQNPEFLRQLTNPETMQ 271
+P+ +S+ + ++ P FLR T T Q
Sbjct: 390 SPKSGSGQSLPKESVAIKGKSSCPAFLRHSTENSTGQ 426
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 40/142 (28%), Positives = 68/142 (47%)
Query: 149 PNTNPLPNPW-MXXXXXXXXXXXXRSSSLGDARPQTPAGIAGLSSPGFEDIFGAMQDTN- 206
P + P PNP + S SLG + G+ GL+S F D G++ +
Sbjct: 106 PVSIPGPNPGEIPQSSSVYSVDGSPSFSLGVLTGLS--GL-GLTSGSFSDQPGSLMWQHI 162
Query: 207 SLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQLRSMVDSNSQLREMIQNPEFLRQ--- 263
S+ +++ +Q LLSN + Q++ NP ++ ++ N ++ ++ NPE +RQ
Sbjct: 163 SVPELVAQLVDDPFIQGLLSNTGLVRQLVLDNPHMQHLIQQNPEIGHILNNPEIMRQTME 222
Query: 264 -LTNPETMQQMVTLQQFLLTQL 284
L NP MQ+M+ Q L+ L
Sbjct: 223 FLRNPSMMQEMMRSQDRALSNL 244
Score = 36 (17.7 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 264 LTNPETMQQMVTLQQFL 280
+ NP MQ ++ ++Q L
Sbjct: 518 MANPRVMQALLQIEQGL 534
>CGD|CAL0004315 [details] [associations]
symbol:orf19.5345 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0007103 "spindle pole body duplication associated
with nuclear envelope" evidence=IEA] [GO:0031593 "polyubiquitin
binding" evidence=IEA] [GO:0030674 "protein binding, bridging"
evidence=IEA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
CGD:CAL0004315 Prosite:PS00299 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 EMBL:AACQ01000059 EMBL:AACQ01000058
InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
InterPro:IPR019954 eggNOG:COG5272 KO:K04523 InterPro:IPR006636
InterPro:IPR015496 PANTHER:PTHR10677 SMART:SM00727
InterPro:IPR019956 PRINTS:PR00348 RefSeq:XP_717069.1
RefSeq:XP_717148.1 ProteinModelPortal:Q5A5Q4 SMR:Q5A5Q4
STRING:Q5A5Q4 GeneID:3641251 GeneID:3641303 KEGG:cal:CaO19.12805
KEGG:cal:CaO19.5345 Uniprot:Q5A5Q4
Length = 339
Score = 156 (60.0 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 37/105 (35%), Positives = 59/105 (56%)
Query: 176 LGDARPQTPAGIAGLSSPGFEDIFGAMQ----DTNSLNQMLQNPAVTQMMQSLLSNPQYM 231
L D AG + L S G M D LN M+ NP V Q MQ++LS+PQ +
Sbjct: 123 LADLTGARYAGYSQLPSASMFGPDGGMNSNIPDPEQLNSMMSNPLVQQQMQAMLSDPQML 182
Query: 232 NQILGLNPQLRSMVDSNSQLREMIQNPEFLRQLTNPETMQQMVTL 276
+ ++ NPQLR+M ++R+M+Q+P F + ++NPE ++ M+ +
Sbjct: 183 DFMIQQNPQLRAM---GPEVRQMLQSPFFRQMMSNPEMLRSMMQM 224
>POMBASE|SPAC26A3.16 [details] [associations]
symbol:dph1 "UBA domain protein Dph1" species:4896
"Schizosaccharomyces pombe" [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISO] [GO:0030474 "spindle pole
body duplication" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=IDA] [GO:0033554 "cellular response to stress"
evidence=NAS] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IMP] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
PomBase:SPAC26A3.16 GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0033554 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 GO:GO:0030433 GO:GO:0042177
GO:GO:0031593 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
eggNOG:COG5272 GO:GO:0030474 PIR:T38404 RefSeq:NP_594159.1
ProteinModelPortal:Q10169 SMR:Q10169 MINT:MINT-216436 STRING:Q10169
PRIDE:Q10169 EnsemblFungi:SPAC26A3.16.1 GeneID:2542667
KEGG:spo:SPAC26A3.16 HOGENOM:HOG000216678 KO:K04523 OMA:PSASMFG
OrthoDB:EOG4T7CCF NextBio:20803715 InterPro:IPR006636
InterPro:IPR015496 PANTHER:PTHR10677 SMART:SM00727 Uniprot:Q10169
Length = 354
Score = 150 (57.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 205 TNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQLRSMVDSNSQLREMIQNPEFLRQL 264
T L ML NP V + + SNPQ ++ I+ +P LR+ + +R+M+Q+PEF R +
Sbjct: 141 TEELANMLSNPMVQSSINEMFSNPQMLDMIINSSPHLRN---APPYVRQMMQSPEFRRAM 197
Query: 265 TNPETMQQMVTLQQFLLTQLGRA 287
T+P+TM+QM L Q Q+G A
Sbjct: 198 TDPDTMRQMAQLHQ----QMGAA 216
>SGD|S000004889 [details] [associations]
symbol:DSK2 "Nuclear-enriched ubiquitin-like
polyubiquitin-binding protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0030674 "protein binding, bridging"
evidence=IMP;IPI] [GO:0005634 "nucleus" evidence=IEA;IC]
[GO:0007103 "spindle pole body duplication associated with nuclear
envelope" evidence=IGI] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
SGD:S000004889 Prosite:PS00299 GO:GO:0005634 GO:GO:0030674
EMBL:BK006946 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
GO:GO:0030433 EMBL:Z49704 InterPro:IPR019955 PROSITE:PS50053
SUPFAM:SSF46934 InterPro:IPR019954 eggNOG:COG5272 GO:GO:0007103
EMBL:L40587 HOGENOM:HOG000216678 KO:K04523 OMA:PSASMFG
OrthoDB:EOG4T7CCF InterPro:IPR006636 InterPro:IPR015496
PANTHER:PTHR10677 SMART:SM00727 PIR:S54583 RefSeq:NP_014003.1
PDB:1WR1 PDB:2BWB PDB:2BWE PDB:2BWF PDB:3M63 PDBsum:1WR1
PDBsum:2BWB PDBsum:2BWE PDBsum:2BWF PDBsum:3M63
ProteinModelPortal:P48510 SMR:P48510 DIP:DIP-4398N IntAct:P48510
MINT:MINT-548016 STRING:P48510 PaxDb:P48510 PeptideAtlas:P48510
EnsemblFungi:YMR276W GeneID:855319 KEGG:sce:YMR276W
GeneTree:ENSGT00390000005720 EvolutionaryTrace:P48510
NextBio:979020 Genevestigator:P48510 GermOnline:YMR276W
Uniprot:P48510
Length = 373
Score = 141 (54.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 38/107 (35%), Positives = 63/107 (58%)
Query: 183 TPAGIAG-LSSPGFEDIFG----AMQ-DTNS---LNQMLQNPAVTQMMQSLLSNPQYMNQ 233
T A AG L+ P D+FG A+ D+N+ L +M++NP M +LSNPQ ++
Sbjct: 118 TSARYAGYLNMPS-ADMFGPDGGALNNDSNNQDELLRMMENPIFQSQMNEMLSNPQMLDF 176
Query: 234 ILGLNPQLRSMVDSNSQLREMIQNPEFLRQLTNPETMQQMVTLQQFL 280
++ NPQL++M Q R+M+Q+P F + LTNP+ ++Q + + +
Sbjct: 177 MIQSNPQLQAM---GPQARQMLQSPMFRQMLTNPDMIRQSMQFARMM 220
>ASPGD|ASPL0000027269 [details] [associations]
symbol:AN5451 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=IEA] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
EMBL:BN001305 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
EMBL:AACD01000094 eggNOG:COG5272 HOGENOM:HOG000216678 KO:K04523
OrthoDB:EOG4T7CCF InterPro:IPR006636 InterPro:IPR015496
PANTHER:PTHR10677 SMART:SM00727 RefSeq:XP_663055.1
ProteinModelPortal:Q5B1X9 SMR:Q5B1X9 STRING:Q5B1X9
EnsemblFungi:CADANIAT00003638 GeneID:2871742 KEGG:ani:AN5451.2
OMA:EFERNIE Uniprot:Q5B1X9
Length = 440
Score = 138 (53.6 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 185 AGIAGLSSPGFEDIFGAM---QDTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQL 241
AG A L G G M D S+ ML+NP V +M L NP ++ ++ NP L
Sbjct: 134 AGFAQLPGAGMFGPDGGMGPPPDAESMLNMLENPQVQSLMNEALQNPAMIDMMIQQNPLL 193
Query: 242 RSMVDSNSQLREMIQNPEFLRQLTNPETMQQMVTLQQ 278
R N R+M+Q+ F R +T+P TM+ M+ +Q+
Sbjct: 194 RD----NPMARQMLQSEGFRRMMTDPNTMRHMMQMQR 226
>GENEDB_PFALCIPARUM|PF11_0142 [details] [associations]
symbol:PF11_0142 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 EMBL:AE014186 HOGENOM:HOG000216678
KO:K04523 InterPro:IPR015496 PANTHER:PTHR10677 HSSP:P54725
RefSeq:XP_001347813.1 ProteinModelPortal:Q8IIM8 IntAct:Q8IIM8
MINT:MINT-1544801 EnsemblProtists:PF11_0142:mRNA GeneID:810689
KEGG:pfa:PF11_0142 EuPathDB:PlasmoDB:PF3D7_1113400 OMA:HTITMAE
ProtClustDB:CLSZ2433670 Uniprot:Q8IIM8
Length = 388
Score = 123 (48.4 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 36/118 (30%), Positives = 56/118 (47%)
Query: 9 VVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQ-----TLEAARNPELM 63
V+ L NNPE++ NL+ NNP +R ++P + +L +P+ LR+ L+A E
Sbjct: 174 VLNELSNNPEMLTNLVSNNPILRNTFSQSPLMQPVLENPNLLREFMRPEILQAGLQIENA 233
Query: 64 REMMRNTDRAMSNIESSPEG-FNM---LRRM--YETVQEPFLNATSMAGNAGNDNSNP 115
M N + +N + P G F M L + + P N T N N+N+NP
Sbjct: 234 LNMNNNNNNNNNNNSNRPGGAFRMEDILNNLNNLNNLSNPN-NTTDNNNNNNNNNANP 290
Score = 111 (44.1 bits), Expect = 0.0010, P = 0.0010
Identities = 29/109 (26%), Positives = 56/109 (51%)
Query: 173 SSSLGDARPQTPAGIAG-LSSPGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQYM 231
+S+LG A A L++ G D F +DT ++ +L NP ++ L +NP+ +
Sbjct: 131 NSALGGADNFNLGNFANMLNANGAGD-FN--RDT--ISSLLNNPLARSVLNELSNNPEML 185
Query: 232 NQILGLNPQLRSMVDSNSQLREMIQNPEFLRQLTNPETMQQMVTLQQFL 280
++ NP LR+ + ++ +++NP LR+ PE +Q + ++ L
Sbjct: 186 TNLVSNNPILRNTFSQSPLMQPVLENPNLLREFMRPEILQAGLQIENAL 234
Score = 53 (23.7 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 206 NSLNQMLQNPAVTQMMQSLLSNPQYMNQILG-LN-PQLRSMVDSNSQLREMIQNPE--FL 261
N+LN LQ+P + Q Q ++S+ N+ LG N P +D N+ + PE +
Sbjct: 292 NNLNSFLQSPELLQAFQQVMSS----NRNLGNFNFPNANMNLDFNTTNVTDNRPPEERYA 347
Query: 262 RQLTNPETM 270
QL++ + M
Sbjct: 348 SQLSSLQEM 356
>UNIPROTKB|Q8IIM8 [details] [associations]
symbol:PF11_0142 "Ubiquitin domain containing protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 EMBL:AE014186 HOGENOM:HOG000216678
KO:K04523 InterPro:IPR015496 PANTHER:PTHR10677 HSSP:P54725
RefSeq:XP_001347813.1 ProteinModelPortal:Q8IIM8 IntAct:Q8IIM8
MINT:MINT-1544801 EnsemblProtists:PF11_0142:mRNA GeneID:810689
KEGG:pfa:PF11_0142 EuPathDB:PlasmoDB:PF3D7_1113400 OMA:HTITMAE
ProtClustDB:CLSZ2433670 Uniprot:Q8IIM8
Length = 388
Score = 123 (48.4 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 36/118 (30%), Positives = 56/118 (47%)
Query: 9 VVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQ-----TLEAARNPELM 63
V+ L NNPE++ NL+ NNP +R ++P + +L +P+ LR+ L+A E
Sbjct: 174 VLNELSNNPEMLTNLVSNNPILRNTFSQSPLMQPVLENPNLLREFMRPEILQAGLQIENA 233
Query: 64 REMMRNTDRAMSNIESSPEG-FNM---LRRM--YETVQEPFLNATSMAGNAGNDNSNP 115
M N + +N + P G F M L + + P N T N N+N+NP
Sbjct: 234 LNMNNNNNNNNNNNSNRPGGAFRMEDILNNLNNLNNLSNPN-NTTDNNNNNNNNNANP 290
Score = 111 (44.1 bits), Expect = 0.0010, P = 0.0010
Identities = 29/109 (26%), Positives = 56/109 (51%)
Query: 173 SSSLGDARPQTPAGIAG-LSSPGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQYM 231
+S+LG A A L++ G D F +DT ++ +L NP ++ L +NP+ +
Sbjct: 131 NSALGGADNFNLGNFANMLNANGAGD-FN--RDT--ISSLLNNPLARSVLNELSNNPEML 185
Query: 232 NQILGLNPQLRSMVDSNSQLREMIQNPEFLRQLTNPETMQQMVTLQQFL 280
++ NP LR+ + ++ +++NP LR+ PE +Q + ++ L
Sbjct: 186 TNLVSNNPILRNTFSQSPLMQPVLENPNLLREFMRPEILQAGLQIENAL 234
Score = 53 (23.7 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 206 NSLNQMLQNPAVTQMMQSLLSNPQYMNQILG-LN-PQLRSMVDSNSQLREMIQNPE--FL 261
N+LN LQ+P + Q Q ++S+ N+ LG N P +D N+ + PE +
Sbjct: 292 NNLNSFLQSPELLQAFQQVMSS----NRNLGNFNFPNANMNLDFNTTNVTDNRPPEERYA 347
Query: 262 RQLTNPETM 270
QL++ + M
Sbjct: 348 SQLSSLQEM 356
>UNIPROTKB|G4MYL1 [details] [associations]
symbol:MGG_01318 "Deubiquitination-protection protein dph1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000449 InterPro:IPR000626
InterPro:IPR009060 Pfam:PF00240 Pfam:PF00627 SMART:SM00213
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955
PROSITE:PS50053 EMBL:CM001232 SUPFAM:SSF46934 KO:K04523
InterPro:IPR006636 InterPro:IPR015496 PANTHER:PTHR10677
SMART:SM00727 RefSeq:XP_003714243.1 ProteinModelPortal:G4MYL1
SMR:G4MYL1 EnsemblFungi:MGG_01318T0 GeneID:2679530
KEGG:mgr:MGG_01318 Uniprot:G4MYL1
Length = 418
Score = 134 (52.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 37/111 (33%), Positives = 60/111 (54%)
Query: 185 AGIAGLSSPGFEDIFG---AMQDTNSLNQM---LQNPAVTQMMQSLLSNPQYMNQILGLN 238
AG+A L +P DIFG M S Q+ L P + M LSNP ++ I+ N
Sbjct: 140 AGLAPLPNP---DIFGPDGGMAPPPSEEQLADLLSQPGMAASMNEALSNPAMIDYIIQSN 196
Query: 239 PQLRSMVDSNSQLREMIQNPEFLRQLTNPETMQQMVTLQQFLLTQLGRAQS 289
P LR+M ++ REM+Q+P+F + +T+PE+++ L++ + G A +
Sbjct: 197 PMLRNMPNA----REMVQSPQFRQMMTDPESIRMAARLRRMMGGSPGEASA 243
>MGI|MGI:2685336 [details] [associations]
symbol:Ubqlnl "ubiquilin-like" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000626 InterPro:IPR009060 Pfam:PF00240
SMART:SM00213 MGI:MGI:2685336 PROSITE:PS50030 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 KO:K04523 InterPro:IPR015496
PANTHER:PTHR10677 GeneTree:ENSGT00390000005720 HOVERGEN:HBG064537
HOGENOM:HOG000234878 EMBL:AK076645 EMBL:AC123830 EMBL:BC111901
EMBL:BC113134 IPI:IPI00226024 RefSeq:NP_941026.2 UniGene:Mm.189668
PDB:2DNA PDBsum:2DNA ProteinModelPortal:Q14DL0 SMR:Q14DL0
PRIDE:Q14DL0 Ensembl:ENSMUST00000059121 GeneID:244179
KEGG:mmu:244179 UCSC:uc009ivl.1 CTD:143630 eggNOG:NOG303424
InParanoid:Q14DL0 OMA:HTIHLVI OrthoDB:EOG43XV3C
EvolutionaryTrace:Q14DL0 NextBio:386143 Bgee:Q14DL0
CleanEx:MM_UBQLNL Genevestigator:Q14DL0 Uniprot:Q14DL0
Length = 610
Score = 121 (47.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 32/118 (27%), Positives = 60/118 (50%)
Query: 3 EIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPEL 62
+++ VQ+L++N + + + P M E+I +NPE++H+L++ L QTLE R+ +
Sbjct: 174 QVLENLCVQSLLSNMDFVHQMPPEQPYMEELIQQNPEVSHLLDNSEILCQTLELVRHLAI 233
Query: 63 MREMMRNTDRAMS-----------NIESSPEGFNMLRRMYETVQEPFLNATS--MAGN 107
++E+M+ A + +E+ P G N L + Y + LN + GN
Sbjct: 234 IQEIMQIQQPAQNPEYPPNSQPFLGLETVPNGNNHLGQSYVNNNDHMLNGVPDLLEGN 291
Score = 51 (23.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 203 QDTNSLNQMLQN-PAVTQMMQSLLSNPQYMNQILGLNPQLRSMVDSNSQLREMIQNPEFL 261
Q T + Q+L+N P + M L++ Q LN Q R + Q ++ + L
Sbjct: 419 QITGGMIQLLRNHPQMAAQMLLLMNTSQ-------LNEQWRQETPTPLQSSQL---HDLL 468
Query: 262 RQLTNPETMQQMVTLQ---QFLLTQ 283
L NP+T Q ++ ++ Q L T+
Sbjct: 469 LALANPKTSQALLQIEHGLQLLATE 493
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.128 0.359 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 291 261 0.00090 114 3 11 23 0.36 34
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 536 (57 KB)
Total size of DFA: 149 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.95u 0.07s 22.02t Elapsed: 00:00:03
Total cpu time: 21.97u 0.07s 22.04t Elapsed: 00:00:03
Start: Fri May 10 23:01:04 2013 End: Fri May 10 23:01:07 2013