BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022858
(291 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
IA+G+A G+ LHD C +IIH ++K NILLD +F
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 40 -WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL-GRRRMRTCQKARSGFPSGFKWVWKK 97
T G+ APE + + K DV +G++L E++ G+R + A WV
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 98 LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
L++ + + L+ V E+ E++ VAL Q P P M+
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 308
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Query: 232 RFTSQQLSIATDNFT--HLLVSGGSGALYK 259
RF+ ++L +A+DNF+ ++L GG G +YK
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYK 56
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKFWTP--------------------- 42
IA+G+A G+ LHD C +IIH ++K NILLD +F
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 195
Query: 43 ----GYAAPETWMSFPVTHKCDVRSFGMLLFEIL-GRRRMRTCQKARSGFPSGFKWVWKK 97
G+ APE + + K DV +G++L E++ G+R + A WV
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 98 LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSMT 142
L++ + + L+ V E+ E++ VAL Q P P M+
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 232 RFTSQQLSIATDNFT--HLLVSGGSGALYK 259
RF+ ++L +A+DNF ++L GG G +YK
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYK 48
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
I IG A G+ LH + IIH ++K NILLD F
Sbjct: 144 ICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 40 --WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK 97
T GY PE ++ +T K DV SFG++LFE+L R Q + +W +
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA-IVQSLPREMVNLAEWAVES 259
Query: 98 LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSM 141
G+ + ++ +K E + A+ + E PSM
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
I IG A G+ LH + IIH ++K NILLD F
Sbjct: 144 ICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 40 --WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKK 97
T GY PE ++ +T K DV SFG++LFE+L R Q + +W +
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA-IVQSLPREMVNLAEWAVES 259
Query: 98 LEKGEFQDLIIVCGMEKNNKEKAERMALVALWRVQYKPEAMPSM 141
G+ + ++ +K E + A+ + E PSM
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 39/95 (41%), Gaps = 30/95 (31%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
IA G A GI LH + IH +IK NILLD F
Sbjct: 129 IAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSR 185
Query: 40 --WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
T Y APE +T K D+ SFG++L EI+
Sbjct: 186 IVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEII 219
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 39/95 (41%), Gaps = 30/95 (31%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
IA G A GI LH + IH +IK NILLD F
Sbjct: 138 IAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSR 194
Query: 40 --WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
T Y APE +T K D+ SFG++L EI+
Sbjct: 195 IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEII 228
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 39/95 (41%), Gaps = 30/95 (31%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
IA G A GI LH + IH +IK NILLD F
Sbjct: 138 IAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXR 194
Query: 40 --WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
T Y APE +T K D+ SFG++L EI+
Sbjct: 195 IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEII 228
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 39/95 (41%), Gaps = 30/95 (31%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
IA G A GI LH + IH +IK NILLD F
Sbjct: 132 IAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXR 188
Query: 40 --WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
T Y APE +T K D+ SFG++L EI+
Sbjct: 189 IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEII 222
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 25/92 (27%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
+A A+G+ LH+ I+H N+K N+L+D K+
Sbjct: 142 MAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA 200
Query: 40 WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEI 71
TP + APE P K DV SFG++L+E+
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 22/91 (24%)
Query: 8 TAEGIVSLHDGCQQQIIHYNIKPENILL----------------DVKFW------TPGYA 45
++G+ LH + +IH ++KP N+LL D++ + +
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWM 170
Query: 46 APETWMSFPVTHKCDVRSFGMLLFEILGRRR 76
APE + + KCDV S+G++L+E++ RR+
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRK 201
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 31/121 (25%)
Query: 9 AEGIVSLHDGCQQQIIHYNIKPENILLD------------VKF---------WTPGYAAP 47
AE ++L + II+ ++KPENILLD K+ TP Y AP
Sbjct: 113 AEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAP 172
Query: 48 ETWMSFPVTHKCDVRSFGMLLFEILG-------RRRMRTCQK---ARSGFPSGFKWVWKK 97
E + P D SFG+L++E+L M+T +K A FP F K
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKD 232
Query: 98 L 98
L
Sbjct: 233 L 233
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 22/90 (24%)
Query: 9 AEGIVSLHDGCQQQIIHYNIKPENILL----------------DVKFW------TPGYAA 46
++G+ LH + +IH ++KP N+LL D++ + + A
Sbjct: 113 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMA 172
Query: 47 PETWMSFPVTHKCDVRSFGMLLFEILGRRR 76
PE + + KCDV S+G++L+E++ RR+
Sbjct: 173 PEVFEGSNYSEKCDVFSWGIILWEVITRRK 202
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 25/92 (27%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVKF------------------------ 39
+A A+G+ LH+ I+H ++K N+L+D K+
Sbjct: 142 MAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA 200
Query: 40 WTPGYAAPETWMSFPVTHKCDVRSFGMLLFEI 71
TP + APE P K DV SFG++L+E+
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 44/133 (33%)
Query: 11 GIVSLHDGCQQQIIHYNIKPENILLDVK--------------------------FWTPGY 44
G+ LH + I+H ++KPEN+LL+ K T Y
Sbjct: 148 GVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYY 204
Query: 45 AAPETWMSFPVTHKCDVRSFGMLLFEILG----------RRRMRTCQKARSGFPSGFKWV 94
APE + KCDV S G++LF +L + +R +K + F S
Sbjct: 205 IAPEV-LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSP---E 260
Query: 95 WKKLEKGEFQDLI 107
WK + +G +DLI
Sbjct: 261 WKNVSEGA-KDLI 272
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 29/89 (32%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENILL-------DVKFW-------------------TPG 43
EG+ LH Q I+H ++KP+NILL D+K TP
Sbjct: 142 EGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPE 198
Query: 44 YAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
Y APE P+T D+ + G++ + +L
Sbjct: 199 YLAPEILNYDPITTATDMWNIGIIAYMLL 227
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 26/76 (34%)
Query: 23 IIHYNIKPENILL---------------------DVKFW-----TPGYAAPETWMSFPVT 56
I+H N+KPEN+LL D + W TPGY +PE P +
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 208
Query: 57 HKCDVRSFGMLLFEIL 72
D+ + G++L+ +L
Sbjct: 209 KPVDIWACGVILYILL 224
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 46/123 (37%)
Query: 11 GIVSLHDGCQQQIIHYNIKPENILLDVK--------------------------FWTPGY 44
GI LH + I+H +IKPENILL+ K T Y
Sbjct: 158 GICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYY 214
Query: 45 AAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFP----SGFKWVWKKLEK 100
APE + KCDV S G++++ +L G+P + + KK+EK
Sbjct: 215 IAPEV-LKKKYNEKCDVWSCGVIMYILL------------CGYPPFGGQNDQDIIKKVEK 261
Query: 101 GEF 103
G++
Sbjct: 262 GKY 264
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 24/92 (26%)
Query: 8 TAEGIVSLHDGCQQQIIHYNIKPENILLD----------------------VKFW--TPG 43
TA+ + L Q+ II+ ++KPEN+LLD K + TPG
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 44 YAAPETWMSFPVTHKCDVRSFGMLLFEILGRR 75
+ APE + D + G+ L+E++ R
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 24/92 (26%)
Query: 8 TAEGIVSLHDGCQQQIIHYNIKPENILLD----------------------VKFW--TPG 43
TA+ + L Q+ II+ ++KPEN+LLD K + TPG
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 44 YAAPETWMSFPVTHKCDVRSFGMLLFEILGRR 75
+ APE + D + G+ L+E++ R
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 24/92 (26%)
Query: 8 TAEGIVSLHDGCQQQIIHYNIKPENILLD----------------------VKFW--TPG 43
TA+ + L Q+ II+ ++KPEN+LLD K + TPG
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 44 YAAPETWMSFPVTHKCDVRSFGMLLFEILGRR 75
+ APE + D + G+ L+E++ R
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 24/92 (26%)
Query: 8 TAEGIVSLHDGCQQQIIHYNIKPENILLD----------------------VKFW--TPG 43
TA+ + L Q+ II+ ++KPEN+LLD K + TPG
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 44 YAAPETWMSFPVTHKCDVRSFGMLLFEILGRR 75
+ APE + D + G+ L+E++ R
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 26/76 (34%)
Query: 23 IIHYNIKPENILL---------------------DVKFW-----TPGYAAPETWMSFPVT 56
I+H N+KPEN+LL D + W TPGY +PE P +
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 185
Query: 57 HKCDVRSFGMLLFEIL 72
D+ + G++L+ +L
Sbjct: 186 KPVDIWACGVILYILL 201
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 26/76 (34%)
Query: 23 IIHYNIKPENILL---------------------DVKFW-----TPGYAAPETWMSFPVT 56
I+H N+KPEN+LL D + W TPGY +PE P +
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 184
Query: 57 HKCDVRSFGMLLFEIL 72
D+ + G++L+ +L
Sbjct: 185 KPVDIWACGVILYILL 200
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 26/76 (34%)
Query: 23 IIHYNIKPENILL---------------------DVKFW-----TPGYAAPETWMSFPVT 56
I+H N+KPEN+LL D + W TPGY +PE P +
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 185
Query: 57 HKCDVRSFGMLLFEIL 72
D+ + G++L+ +L
Sbjct: 186 KPVDIWACGVILYILL 201
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 37/126 (29%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENIL-------------------------LDVKFWTPGY 44
EGI +H Q I+H ++KPENIL L V F TP +
Sbjct: 198 EGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEF 254
Query: 45 AAPET----WMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFPSGFKWVWKKLEK 100
APE ++SFP D+ S G++ + +L + W LE
Sbjct: 255 LAPEVVNYDFVSFPT----DMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW-DLED 309
Query: 101 GEFQDL 106
EFQD+
Sbjct: 310 EEFQDI 315
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 46/123 (37%)
Query: 11 GIVSLHDGCQQQIIHYNIKPENILLDV--------------------------KFWTPGY 44
GI +H + +I+H ++KPEN+LL+ K T Y
Sbjct: 161 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 217
Query: 45 AAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFP----SGFKWVWKKLEK 100
APE + KCDV S G++L+ +L SG P + + KK+EK
Sbjct: 218 IAPEV-LHGTYDEKCDVWSTGVILYILL------------SGCPPFNGANEYDILKKVEK 264
Query: 101 GEF 103
G++
Sbjct: 265 GKY 267
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 46/123 (37%)
Query: 11 GIVSLHDGCQQQIIHYNIKPENILLDV--------------------------KFWTPGY 44
GI +H + +I+H ++KPEN+LL+ K T Y
Sbjct: 162 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 218
Query: 45 AAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFP----SGFKWVWKKLEK 100
APE + KCDV S G++L+ +L SG P + + KK+EK
Sbjct: 219 IAPEV-LHGTYDEKCDVWSTGVILYILL------------SGCPPFNGANEYDILKKVEK 265
Query: 101 GEF 103
G++
Sbjct: 266 GKY 268
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 34.3 bits (77), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 22 QIIHYNIKPENILLDVK----FWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
+I + + EN+L D K TP Y APE + H D SFG+LL+E+L
Sbjct: 159 KIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 213
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 22 QIIHYNIKPENILLDVK----FWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
+I + + EN+L D K TP Y APE + H D SFG+LL+E+L
Sbjct: 158 KIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 212
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 46/123 (37%)
Query: 11 GIVSLHDGCQQQIIHYNIKPENILLDV--------------------------KFWTPGY 44
GI +H + +I+H ++KPEN+LL+ K T Y
Sbjct: 138 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 194
Query: 45 AAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFP----SGFKWVWKKLEK 100
APE + KCDV S G++L+ +L SG P + + KK+EK
Sbjct: 195 IAPEV-LHGTYDEKCDVWSTGVILYILL------------SGCPPFNGANEYDILKKVEK 241
Query: 101 GEF 103
G++
Sbjct: 242 GKY 244
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 42/115 (36%)
Query: 23 IIHYNIKPENIL-------LDVKF--------------------WTPGYAAPETWMSFPV 55
++H ++KPEN+L L++K +T YAAPE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGY 186
Query: 56 THKCDVRSFGMLLFEIL-------GRRRMRTCQKARSGFPSGFKWVWKKLEKGEF 103
CD+ S G++L+ +L R TC A + KK++KG+F
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE--------IMKKIKKGDF 233
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 30/88 (34%)
Query: 11 GIVSLHDGCQQQIIHYNIKPENILLDVK--------------------------FWTPGY 44
GI +H + I+H ++KPENILL+ K T Y
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 45 AAPETWMSFPVTHKCDVRSFGMLLFEIL 72
APE + KCDV S G++L+ +L
Sbjct: 190 IAPEV-LRGTYDEKCDVWSAGVILYILL 216
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 25/89 (28%)
Query: 12 IVSLHDGCQQ-QIIHYNIKPENILLD----VKF-------------------WTPGYAAP 47
I+S + C + +I+H ++KPEN+LLD VK +P YAAP
Sbjct: 122 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 181
Query: 48 ETWMS-FPVTHKCDVRSFGMLLFEILGRR 75
E + DV S G++L+ +L RR
Sbjct: 182 EVISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 25/89 (28%)
Query: 12 IVSLHDGCQQ-QIIHYNIKPENILLD----VKF-------------------WTPGYAAP 47
I+S + C + +I+H ++KPEN+LLD VK +P YAAP
Sbjct: 121 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 180
Query: 48 ETWMS-FPVTHKCDVRSFGMLLFEILGRR 75
E + DV S G++L+ +L RR
Sbjct: 181 EVISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 23/89 (25%)
Query: 8 TAEGIVSLHDGCQQQIIHYNIKPENILLDV-----------------------KFWTPGY 44
AE L D +++I++ ++KPENILLD + T GY
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGY 351
Query: 45 AAPETWMSFPVTHKCDVRSFGMLLFEILG 73
APE + T D + G LL+E++
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIA 380
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 25/89 (28%)
Query: 12 IVSLHDGCQQ-QIIHYNIKPENILLD----VKF-------------------WTPGYAAP 47
I+S + C + +I+H ++KPEN+LLD VK +P YAAP
Sbjct: 116 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 175
Query: 48 ETWMS-FPVTHKCDVRSFGMLLFEILGRR 75
E + DV S G++L+ +L RR
Sbjct: 176 EVISGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 30/90 (33%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENILLDVKF----------------------W-----TP 42
E ++ H Q ++H N+KPEN+LL K W TP
Sbjct: 121 EAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP 177
Query: 43 GYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
GY +PE P D+ + G++L+ +L
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILL 207
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 23/89 (25%)
Query: 8 TAEGIVSLHDGCQQQIIHYNIKPENILLDV-----------------------KFWTPGY 44
AE L D +++I++ ++KPENILLD + T GY
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGY 351
Query: 45 AAPETWMSFPVTHKCDVRSFGMLLFEILG 73
APE + T D + G LL+E++
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIA 380
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 25/89 (28%)
Query: 12 IVSLHDGCQQ-QIIHYNIKPENILLD----VKF-------------------WTPGYAAP 47
I+S + C + +I+H ++KPEN+LLD VK +P YAAP
Sbjct: 112 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 171
Query: 48 ETWM-SFPVTHKCDVRSFGMLLFEILGRR 75
E + DV S G++L+ +L RR
Sbjct: 172 EVISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 46/123 (37%)
Query: 11 GIVSLHDGCQQQIIHYNIKPENILLDV--------------------------KFWTPGY 44
GI +H + +I+H ++KPEN+LL+ K T Y
Sbjct: 144 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 200
Query: 45 AAPETWMSFPVTHKCDVRSFGMLLFEILGRRRMRTCQKARSGFP----SGFKWVWKKLEK 100
APE + KCDV S G++L+ +L SG P + + KK+EK
Sbjct: 201 IAPEV-LHGTYDEKCDVWSTGVILYILL------------SGCPPFNGANEYDILKKVEK 247
Query: 101 GEF 103
G++
Sbjct: 248 GKY 250
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 30/88 (34%)
Query: 11 GIVSLHDGCQQQIIHYNIKPENILLDVK--------------------------FWTPGY 44
GI +H + I+H ++KPENILL+ K T Y
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 45 AAPETWMSFPVTHKCDVRSFGMLLFEIL 72
APE + KCDV S G++L+ +L
Sbjct: 190 IAPEV-LRGTYDEKCDVWSAGVILYILL 216
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 30/88 (34%)
Query: 11 GIVSLHDGCQQQIIHYNIKPENILLDVK--------------------------FWTPGY 44
GI +H + I+H ++KPENILL+ K T Y
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 45 AAPETWMSFPVTHKCDVRSFGMLLFEIL 72
APE + KCDV S G++L+ +L
Sbjct: 190 IAPEV-LRGTYDEKCDVWSAGVILYILL 216
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 44 YAAPETWMSFPVTHKCDVRSFGMLLFEIL-----GRRRMRTCQKARS-GFPSGFKWVWKK 97
Y +PE +HK D+ S G++LFE+L R+RT R+ FP F +
Sbjct: 196 YMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKY-P 254
Query: 98 LEKGEFQDLIIVCGMEK 114
E QD++ ME+
Sbjct: 255 CEYVMVQDMLSPSPMER 271
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 40/117 (34%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENILLDVKF----------------------W-----TP 42
E ++ H Q ++H ++KPEN+LL K W TP
Sbjct: 132 EAVLHCH---QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP 188
Query: 43 GYAAPETWMSFPVTHKCDVRSFGMLLFEIL-------GRRRMRTCQKARSG---FPS 89
GY +PE P D+ + G++L+ +L + R Q+ ++G FPS
Sbjct: 189 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS 245
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKAF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENILLDV 37
+G+ LH C+ IIH +IKPENILL V
Sbjct: 141 QGLDYLHTKCR--IIHTDIKPENILLSV 166
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENILLDV 37
+G+ LH C+ IIH +IKPENILL V
Sbjct: 157 QGLDYLHTKCR--IIHTDIKPENILLSV 182
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 30/92 (32%)
Query: 6 IGTAEGIVSLHDGCQQQIIHYNIKPENIL-------------------------LDVKFW 40
IGTA + H+ I H ++KPEN+L L +
Sbjct: 118 IGTAIQFLHSHN-----IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY 172
Query: 41 TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
TP Y APE CD+ S G++++ +L
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 204
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 30/92 (32%)
Query: 6 IGTAEGIVSLHDGCQQQIIHYNIKPENIL-------------------------LDVKFW 40
IGTA + H+ I H ++KPEN+L L +
Sbjct: 137 IGTAIQFLHSHN-----IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY 191
Query: 41 TPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
TP Y APE CD+ S G++++ +L
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 223
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 28/88 (31%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENILLD----VKFWTPG---------------------Y 44
+GI HD +I+H +IKP+NIL+D +K + G Y
Sbjct: 122 DGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQY 178
Query: 45 AAPETWMSFPVTHKCDVRSFGMLLFEIL 72
+PE D+ S G++L+E+L
Sbjct: 179 FSPEQAKGEATDECTDIYSIGIVLYEML 206
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 29/89 (32%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENIL--------------------------LDVKFWTPG 43
+ + LHD I+H ++KPEN+L L TPG
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 44 YAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
Y APE P + D S G++ + +L
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 27/77 (35%)
Query: 23 IIHYNIKPENILL----------------------DVKFW-----TPGYAAPETWMSFPV 55
I+H ++KPEN+LL D + W TPGY +PE P
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 56 THKCDVRSFGMLLFEIL 72
D+ + G++L+ +L
Sbjct: 184 GKPVDMWACGVILYILL 200
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 37/97 (38%), Gaps = 30/97 (30%)
Query: 3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VKFWTPGYA------------- 45
+ A EG+ LH Q IH N+ N+LLD VK G A
Sbjct: 121 LFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 46 ----------APETWMSFPVTHKCDVRSFGMLLFEIL 72
APE + + DV SFG+ L+E+L
Sbjct: 178 EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 29/89 (32%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENIL--------------------------LDVKFWTPG 43
+ + LHD I+H ++KPEN+L L TPG
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 44 YAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
Y APE P + D S G++ + +L
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 37/104 (35%)
Query: 23 IIHYNIKPENILL----------------------DVKFW-----TPGYAAPETWMSFPV 55
I+H ++KPEN+LL D + W TPGY +PE P
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 56 THKCDVRSFGMLLFEIL-------GRRRMRTCQKARSG---FPS 89
D+ + G++L+ +L + R Q+ ++G FPS
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS 227
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 37/97 (38%), Gaps = 30/97 (30%)
Query: 3 IIAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD----VKFWTPGYA------------- 45
+ A EG+ LH Q IH N+ N+LLD VK G A
Sbjct: 121 LFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 46 ----------APETWMSFPVTHKCDVRSFGMLLFEIL 72
APE + + DV SFG+ L+E+L
Sbjct: 178 EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 29/89 (32%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENIL--------------------------LDVKFWTPG 43
+ + LHD I+H ++KPEN+L L TPG
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 44 YAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
Y APE P + D S G++ + +L
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 29/89 (32%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENIL--------------------------LDVKFWTPG 43
+ + LHD I+H ++KPEN+L L TPG
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 44 YAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
Y APE P + D S G++ + +L
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 28 IKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILG 73
++ EN LL +T + APE CD+ S G+LL+ +L
Sbjct: 175 LRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 28 IKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEILG 73
++ EN LL +T + APE CD+ S G+LL+ +L
Sbjct: 175 LRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 30/94 (31%)
Query: 9 AEGIVSLHDGCQQQIIHYNIKPENILLD-------------------------VKFWTPG 43
AE ++++ Q +H +IKP+NIL+D V TP
Sbjct: 182 AEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPD 241
Query: 44 YAAPETWMSFP-----VTHKCDVRSFGMLLFEIL 72
Y +PE + +CD S G+ ++E+L
Sbjct: 242 YISPEILQAMEGGKGRYGPECDWWSLGVCMYEML 275
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 243 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 302
Query: 111 GMEKN 115
G KN
Sbjct: 303 GNLKN 307
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 31.2 bits (69), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 243 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 302
Query: 111 GMEKN 115
G KN
Sbjct: 303 GNLKN 307
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 31.2 bits (69), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 282
Query: 111 GMEKN 115
G KN
Sbjct: 283 GNLKN 287
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 31.2 bits (69), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 24/73 (32%)
Query: 23 IIHYNIKPENILLDVK------------------------FWTPGYAAPETWMSFPVTHK 58
++H ++KP N+ LD K TP Y +PE K
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEK 196
Query: 59 CDVRSFGMLLFEI 71
D+ S G LL+E+
Sbjct: 197 SDIWSLGCLLYEL 209
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 25/86 (29%)
Query: 12 IVSLHDGCQQQ-IIHYNIKPENILLDVKF-----------------------WTPGYAAP 47
I+S D C + ++H ++KPEN+LLD +P YAAP
Sbjct: 120 ILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAP 179
Query: 48 ETWMS-FPVTHKCDVRSFGMLLFEIL 72
E + D+ S G++L+ +L
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALL 205
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 214
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 215 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 274
Query: 111 GMEKN 115
G KN
Sbjct: 275 GNLKN 279
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 24/73 (32%)
Query: 23 IIHYNIKPENILLDVK------------------------FWTPGYAAPETWMSFPVTHK 58
++H ++KP N+ LD K TP Y +PE K
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEK 196
Query: 59 CDVRSFGMLLFEI 71
D+ S G LL+E+
Sbjct: 197 SDIWSLGCLLYEL 209
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 25/86 (29%)
Query: 12 IVSLHDGCQQQ-IIHYNIKPENILLDVKF-----------------------WTPGYAAP 47
I+S D C + ++H ++KPEN+LLD +P YAAP
Sbjct: 120 ILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAP 179
Query: 48 ETWMS-FPVTHKCDVRSFGMLLFEIL 72
E + D+ S G++L+ +L
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALL 205
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 31.2 bits (69), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 282
Query: 111 GMEKN 115
G KN
Sbjct: 283 GNLKN 287
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 24/73 (32%)
Query: 23 IIHYNIKPENILLDVK------------------------FWTPGYAAPETWMSFPVTHK 58
++H ++KP N+ LD K TP Y +PE K
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEK 196
Query: 59 CDVRSFGMLLFEI 71
D+ S G LL+E+
Sbjct: 197 SDIWSLGCLLYEL 209
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 282
Query: 111 GMEKN 115
G KN
Sbjct: 283 GNLKN 287
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 282
Query: 111 GMEKN 115
G KN
Sbjct: 283 GNLKN 287
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 214
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 215 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 274
Query: 111 GMEKN 115
G KN
Sbjct: 275 GNLKN 279
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 243 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 302
Query: 111 GMEKN 115
G KN
Sbjct: 303 GNLKN 307
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 282
Query: 111 GMEKN 115
G KN
Sbjct: 283 GNLKN 287
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 282
Query: 111 GMEKN 115
G KN
Sbjct: 283 GNLKN 287
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 282
Query: 111 GMEKN 115
G KN
Sbjct: 283 GNLKN 287
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 30.8 bits (68), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 223 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 282
Query: 111 GMEKN 115
G KN
Sbjct: 283 GNLKN 287
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.8 bits (68), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 30.8 bits (68), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 216
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 217 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 276
Query: 111 GMEKN 115
G KN
Sbjct: 277 GNLKN 281
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.8 bits (68), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 208
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ + ++ +K SG FPS F K L + Q DL
Sbjct: 209 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 268
Query: 111 GMEKN 115
G KN
Sbjct: 269 GNLKN 273
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 32/125 (25%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGFKWVWKKLEKGEFQ-DLIIVC 110
+ G+L++E+ ++ +K SG FPS F K L + Q DL
Sbjct: 222 WALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281
Query: 111 GMEKN 115
G KN
Sbjct: 282 GNLKN 286
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 28 IKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
++ EN LL +T + APE CD+ S G+LL+ L
Sbjct: 170 LRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXL 214
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 28 IKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
++ EN LL +T + APE CD+ S G+LL+ +L
Sbjct: 170 LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTML 214
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENILLDV 37
+G+ LH C+ IIH +IKPENIL+ V
Sbjct: 151 QGLDYLHSKCK--IIHTDIKPENILMCV 176
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 8 TAEGIVSLHD-GCQQQIIH--YNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSF 64
T + ++ + D G + I H Y K N L VK + APE TH+ DV SF
Sbjct: 173 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-----WMAPEALFDRIYTHQSDVWSF 227
Query: 65 GMLLFEIL 72
G+LL+EI
Sbjct: 228 GVLLWEIF 235
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 8 TAEGIVSLHD-GCQQQIIH--YNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSF 64
T + ++ + D G + I H Y K N L VK + APE TH+ DV SF
Sbjct: 176 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-----WMAPEALFDRIYTHQSDVWSF 230
Query: 65 GMLLFEIL 72
G+LL+EI
Sbjct: 231 GVLLWEIF 238
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 8 TAEGIVSLHD-GCQQQIIH--YNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSF 64
T + ++ + D G + I H Y K N L VK + APE TH+ DV SF
Sbjct: 184 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-----WMAPEALFDRIYTHQSDVWSF 238
Query: 65 GMLLFEIL 72
G+LL+EI
Sbjct: 239 GVLLWEIF 246
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 25/75 (33%)
Query: 23 IIHYNIKPENIL-------------------------LDVKFWTPGYAAPETWMSFPVTH 57
I+H ++KPEN+L + TPGY APE P +
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSK 186
Query: 58 KCDVRSFGMLLFEIL 72
D S G++ + +L
Sbjct: 187 AVDCWSIGVITYILL 201
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 8 TAEGIVSLHD-GCQQQIIH--YNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSF 64
T + ++ + D G + I H Y K N L VK + APE TH+ DV SF
Sbjct: 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-----WMAPEALFDRIYTHQSDVWSF 279
Query: 65 GMLLFEIL 72
G+LL+EI
Sbjct: 280 GVLLWEIF 287
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 8 TAEGIVSLHD-GCQQQIIH--YNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSF 64
T + ++ + D G + I H Y K N L VK + APE TH+ DV SF
Sbjct: 184 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-----WMAPEALFDRIYTHQSDVWSF 238
Query: 65 GMLLFEIL 72
G+LL+EI
Sbjct: 239 GVLLWEIF 246
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 8 TAEGIVSLHD-GCQQQIIH--YNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSF 64
T + ++ + D G + I H Y K N L VK + APE TH+ DV SF
Sbjct: 177 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-----WMAPEALFDRIYTHQSDVWSF 231
Query: 65 GMLLFEIL 72
G+LL+EI
Sbjct: 232 GVLLWEIF 239
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 25/86 (29%)
Query: 12 IVSLHDGC-QQQIIHYNIKPENILLDVKF-----------------------WTPGYAAP 47
IVS C Q++I+H ++K EN+LLD +P YAAP
Sbjct: 120 IVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAP 179
Query: 48 ETWMSFPVTH-KCDVRSFGMLLFEIL 72
E + + DV S G++L+ ++
Sbjct: 180 ELFQGKKYDGPEVDVWSLGVILYTLV 205
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 8 TAEGIVSLHD-GCQQQIIH--YNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSF 64
T + ++ + D G + I H Y K N L VK + APE TH+ DV SF
Sbjct: 184 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-----WMAPEALFDRIYTHQSDVWSF 238
Query: 65 GMLLFEIL 72
G+LL+EI
Sbjct: 239 GVLLWEIF 246
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 31/100 (31%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGF 91
+ G+L++E+ + ++ +K SG FPS F
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 8 TAEGIVSLHD-GCQQQIIH--YNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSF 64
T + ++ + D G + I H Y K N L VK + APE TH+ DV SF
Sbjct: 169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK-----WMAPEALFDRIYTHQSDVWSF 223
Query: 65 GMLLFEIL 72
G+LL+EI
Sbjct: 224 GVLLWEIF 231
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 31/100 (31%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGF 91
+ G+L++E+ + ++ +K SG FPS F
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 31/100 (31%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGF 91
+ G+L++E+ + ++ +K SG FPS F
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 31/100 (31%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGF 91
+ G+L++E+ + ++ +K SG FPS F
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 29/95 (30%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENIL--------------------------LDV 37
I E I LH I H ++KPEN+L L
Sbjct: 166 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 222
Query: 38 KFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
+TP Y APE CD+ S G++++ +L
Sbjct: 223 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 257
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 25/86 (29%)
Query: 12 IVSLHDGCQQQ-IIHYNIKPENILLDVKF-----------------------WTPGYAAP 47
I+S D C + ++H ++KPEN+LLD +P YAAP
Sbjct: 125 ILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAP 184
Query: 48 ETWMS-FPVTHKCDVRSFGMLLFEIL 72
E + D+ S G++L+ +L
Sbjct: 185 EVISGRLYAGPEVDIWSSGVILYALL 210
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 30/90 (33%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENILL----------------------DVKFW-----TP 42
E ++ H Q ++H ++KPEN+LL D + W TP
Sbjct: 114 EAVLHCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTP 170
Query: 43 GYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
GY +PE D+ + G++L+ +L
Sbjct: 171 GYLSPEVLRKEAYGKPVDIWACGVILYILL 200
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 29/95 (30%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENIL--------------------------LDV 37
I E I LH I H ++KPEN+L L
Sbjct: 172 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 228
Query: 38 KFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
+TP Y APE CD+ S G++++ +L
Sbjct: 229 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 263
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 31/100 (31%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGF 91
+ G+L++E+ + ++ +K SG FPS F
Sbjct: 222 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 29/90 (32%)
Query: 9 AEGIVSLHDGCQQQIIHYNIKPENIL--------------------------LDVKFWTP 42
E I LH I H ++KPEN+L L +TP
Sbjct: 141 GEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 197
Query: 43 GYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
Y APE CD+ S G++++ +L
Sbjct: 198 YYVAPEVLGPEKYDKSCDMWSLGVIMYILL 227
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 29/95 (30%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENIL--------------------------LDV 37
I E I LH I H ++KPEN+L L
Sbjct: 122 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 178
Query: 38 KFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
+TP Y APE CD+ S G++++ +L
Sbjct: 179 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 213
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 29/95 (30%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENIL--------------------------LDV 37
I E I LH I H ++KPEN+L L
Sbjct: 120 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 176
Query: 38 KFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
+TP Y APE CD+ S G++++ +L
Sbjct: 177 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 211
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 29/95 (30%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENIL--------------------------LDV 37
I E I LH I H ++KPEN+L L
Sbjct: 126 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 182
Query: 38 KFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
+TP Y APE CD+ S G++++ +L
Sbjct: 183 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 217
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 31/100 (31%)
Query: 23 IIHYNIKPENILLDVKFW---------------------TPGYAAPETWMSFPVTHKCDV 61
+I+ ++KPEN+L+D + + TP Y APE +S D
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDW 207
Query: 62 RSFGMLLFEI-------LGRRRMRTCQKARSG---FPSGF 91
+ G+L++E+ + ++ +K SG FPS F
Sbjct: 208 WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 247
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 29/95 (30%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENIL--------------------------LDV 37
I E I LH I H ++KPEN+L L
Sbjct: 128 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 184
Query: 38 KFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
+TP Y APE CD+ S G++++ +L
Sbjct: 185 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 219
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 25/86 (29%)
Query: 12 IVSLHDGCQQQ-IIHYNIKPENILLDVKF-----------------------WTPGYAAP 47
IVS C Q+ I+H ++K EN+LLD +P YAAP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAP 181
Query: 48 ETWMSFPVTH-KCDVRSFGMLLFEIL 72
E + + DV S G++L+ ++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 25/86 (29%)
Query: 12 IVSLHDGCQQQ-IIHYNIKPENILLDVKF-----------------------WTPGYAAP 47
IVS C Q+ I+H ++K EN+LLD +P YAAP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAP 181
Query: 48 ETWMSFPVTH-KCDVRSFGMLLFEIL 72
E + + DV S G++L+ ++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 29/95 (30%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENIL--------------------------LDV 37
I E I LH I H ++KPEN+L L
Sbjct: 121 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 177
Query: 38 KFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
+TP Y APE CD+ S G++++ +L
Sbjct: 178 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 212
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 25/86 (29%)
Query: 12 IVSLHDGCQQQ-IIHYNIKPENILLDVKF-----------------------WTPGYAAP 47
IVS C Q+ I+H ++K EN+LLD +P YAAP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAP 181
Query: 48 ETWMSFPVTH-KCDVRSFGMLLFEIL 72
E + + DV S G++L+ ++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 25/86 (29%)
Query: 12 IVSLHDGCQQQ-IIHYNIKPENILLDVKF-----------------------WTPGYAAP 47
IVS C Q+ I+H ++K EN+LLD +P YAAP
Sbjct: 122 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAP 181
Query: 48 ETWMSFPVTH-KCDVRSFGMLLFEIL 72
E + + DV S G++L+ ++
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 29/95 (30%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENIL--------------------------LDV 37
I E I LH I H ++KPEN+L L
Sbjct: 127 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 183
Query: 38 KFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
+TP Y APE CD+ S G++++ +L
Sbjct: 184 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 218
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 29/95 (30%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENIL--------------------------LDV 37
I E I LH I H ++KPEN+L L
Sbjct: 122 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 178
Query: 38 KFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
+TP Y APE CD+ S G++++ +L
Sbjct: 179 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 213
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 25/86 (29%)
Query: 12 IVSLHDGC-QQQIIHYNIKPENILLDVKF-----------------------WTPGYAAP 47
IVS C Q++I+H ++K EN+LLD P YAAP
Sbjct: 123 IVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAP 182
Query: 48 ETWMSFPVTH-KCDVRSFGMLLFEIL 72
E + + DV S G++L+ ++
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLV 208
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 41 TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILGR 74
P + APE K DV SFG++L EI+GR
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 8 TAEGIVSLHDGCQQQIIHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGML 67
T +G V L D ++++ ++ L TP Y +PE + P +K D+ + G +
Sbjct: 159 TKDGTVQLGDFGIARVLNSTVE----LARACIGTPYYLSPEICENKPYNNKSDIWALGCV 214
Query: 68 LFEI 71
L+E+
Sbjct: 215 LYEL 218
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLD 36
+ + E +++L Q+IIH ++KP+NILLD
Sbjct: 117 VKLFICELVMALDYLQNQRIIHRDMKPDNILLD 149
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 25/86 (29%)
Query: 12 IVSLHDGCQQQ-IIHYNIKPENILLDVKF-----------------------WTPGYAAP 47
IVS C Q+ I+H ++K EN+LLD +P YAAP
Sbjct: 115 IVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAP 174
Query: 48 ETWMSFPVTH-KCDVRSFGMLLFEIL 72
E + + DV S G++L+ ++
Sbjct: 175 ELFQGKKYDGPEVDVWSLGVILYTLV 200
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 44 YAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRM----RTCQKARSGFPSGFKWVWKKLE 99
+ APE T K DV SFG+LL+EI+ ++ RT + G++ +
Sbjct: 177 WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENC 236
Query: 100 KGEFQDLIIVCGMEK 114
E D++ +C EK
Sbjct: 237 PDELYDIMKMCWKEK 251
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 44 YAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
Y +PE +HK D+ S G++LFE+L
Sbjct: 242 YMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 24 IHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
I Y K N L VK + APE TH+ DV SFG+L++EI
Sbjct: 210 IDYYKKTTNGRLPVK-----WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 44 YAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRM 77
++APE + F + K DV +FG+L++E+ +M
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKM 204
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 24 IHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
I Y K N L VK + APE TH+ DV SFG+L++EI
Sbjct: 210 IDYYKKTTNGRLPVK-----WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 24 IHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
I Y K N L VK + APE TH+ DV SFG+L++EI
Sbjct: 210 IDYYKKTTNGRLPVK-----WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 24 IHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
I Y K N L VK + APE TH+ DV SFG+L++EI
Sbjct: 210 IDYYKKTTNGRLPVK-----WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 24 IHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
I Y K N L VK + APE TH+ DV SFG+L++EI
Sbjct: 210 IDYYKKTTNGRLPVK-----WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 8 TAEGIVSLHD-GCQQQIIHYNI--KPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSF 64
T + ++ + D G + I H + K N L VK + APE TH+ DV SF
Sbjct: 184 TEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVK-----WMAPEALFDRIYTHQSDVWSF 238
Query: 65 GMLLFEIL 72
G+LL+EI
Sbjct: 239 GVLLWEIF 246
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 24 IHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
I Y K N L VK + APE TH+ DV SFG+L++EI
Sbjct: 210 IDYYKKTTNGRLPVK-----WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 24 IHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
I Y K N L VK + APE TH+ DV SFG+L++EI
Sbjct: 199 IDYYKKTTNGRLPVK-----WMAPEALFDRVYTHQSDVWSFGVLMWEIF 242
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 24 IHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
I Y K N L VK + APE TH+ DV SFG+L++EI
Sbjct: 202 IDYYKKTTNGRLPVK-----WMAPEALFDRVYTHQSDVWSFGVLMWEIF 245
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 24 IHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
I Y K N L VK + APE TH+ DV SFG+L++EI
Sbjct: 197 IDYYKKTTNGRLPVK-----WMAPEALFDRVYTHQSDVWSFGVLMWEIF 240
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 3/27 (11%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENILLD 36
E I +LH + I+H ++KPENILLD
Sbjct: 135 EVICALH---KLNIVHRDLKPENILLD 158
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 3/27 (11%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENILLD 36
E I +LH + I+H ++KPENILLD
Sbjct: 135 EVICALH---KLNIVHRDLKPENILLD 158
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 3/27 (11%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENILLD 36
E I +LH + I+H ++KPENILLD
Sbjct: 122 EVICALH---KLNIVHRDLKPENILLD 145
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 24 IHYNIKPENILLDVKFWTPGYAAPETWMSFPVTHKCDVRSFGMLLFEIL 72
I Y K N L VK + APE TH+ DV SFG+L++EI
Sbjct: 256 IDYYKKTTNGRLPVK-----WMAPEALFDRVYTHQSDVWSFGVLMWEIF 299
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 24/75 (32%)
Query: 23 IIHYNIKPENILLDVK--------------FW----------TPGYAAPETWMSFPVTHK 58
II+ ++K +N++LD + W TP Y APE P
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 59 CDVRSFGMLLFEILG 73
D +FG+LL+E+L
Sbjct: 523 VDWWAFGVLLYEMLA 537
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 41 TPGYAAPETWMSFPVTHKCDVRSFGMLLFEILG 73
TP Y APE P D +FG+LL+E+L
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 216
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 53/139 (38%), Gaps = 27/139 (19%)
Query: 20 QQQIIHYNIKPENILLD----VKFWTPGYA-------------APETWMSFP------VT 56
Q+Q IH N+ NIL+ K G + P WM+ T
Sbjct: 157 QKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYT 216
Query: 57 HKCDVRSFGMLLFEILGRRRM----RTCQKARSGFPSGFKWVWKKLEKGEFQDLIIVCGM 112
DV S+G+LL+EI+ TC + P G++ E DL+ C
Sbjct: 217 TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWR 276
Query: 113 EKNNKEKAERMALVALWRV 131
EK + + LV+L R+
Sbjct: 277 EKPYERPSFAQILVSLNRM 295
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 28/88 (31%)
Query: 10 EGIVSLHDGCQQQIIHYNIKPENILLDVK-------------------------FWTPGY 44
EG+ +H + I+H +IKPENI+ + K T +
Sbjct: 160 EGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEF 216
Query: 45 AAPETWMSFPVTHKCDVRSFGMLLFEIL 72
AAPE PV D+ + G+L + +L
Sbjct: 217 AAPEIVDREPVGFYTDMWAIGVLGYVLL 244
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 14 SLHDGCQQQIIHYNIKPENILLDVK 38
+LH ++++IH +IKPEN+L+ K
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYK 150
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 14 SLHDGCQQQIIHYNIKPENILLDVK 38
+LH ++++IH +IKPEN+L+ K
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYK 150
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 14 SLHDGCQQQIIHYNIKPENILLDVK 38
+LH ++++IH +IKPEN+L+ K
Sbjct: 127 ALHYCHERKVIHRDIKPENLLMGYK 151
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 44 YAAPETWMSFPVTHKCDVRSFGMLLFEILGRRRM----RTCQKARSGFPSGFKWVWKKLE 99
+ APE T K +V SFG+LL+EI+ ++ RT S G++ +
Sbjct: 176 WTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENC 235
Query: 100 KGEFQDLIIVCGMEK 114
E D++ +C EK
Sbjct: 236 PDELYDIMKMCWKEK 250
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 46 APETWMSFPVTHKCDVRSFGMLLFEIL 72
APE TH+ DV SFG+L++EI
Sbjct: 227 APEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 46 APETWMSFPVTHKCDVRSFGMLLFEIL 72
APE TH+ DV SFG+L++EI
Sbjct: 227 APEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 46 APETWMSFPVTHKCDVRSFGMLLFEIL 72
APE TH+ DV SFG+L++EI
Sbjct: 227 APEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 25/94 (26%)
Query: 4 IAIGTAEGIVSLHDGCQQQIIHYNIKPENILLDVK----------------------FWT 41
++I G+ L + + QI+H ++KP NIL++ + T
Sbjct: 119 VSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 176
Query: 42 PGYAAPETWMSFPVTHKCDVRSFGMLLFEI-LGR 74
Y APE + + D+ S G+ L E+ +GR
Sbjct: 177 RSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 27.7 bits (60), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 26/90 (28%)
Query: 11 GIVSLHDGCQQQIIHYNIKPENIL-----------------------LDVKFWTPGYAAP 47
G+ LH C I+H ++KPENIL LD T Y AP
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAP 180
Query: 48 ETWMSFPVTHKCDVRSFGMLLFEILGRRRM 77
E + D+ S G + E+ R+ +
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRKPL 210
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 27.3 bits (59), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 44 YAAPETWMSFPVTHKCDVRSFGMLLFEILGR 74
+ A E+ ++ T K DV SFG+LL+E+L R
Sbjct: 194 WTALESLQTYRFTTKSDVWSFGVLLWELLTR 224
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.134 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,307,071
Number of Sequences: 62578
Number of extensions: 303930
Number of successful extensions: 1661
Number of sequences better than 100.0: 184
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 127
Number of HSP's that attempted gapping in prelim test: 1499
Number of HSP's gapped (non-prelim): 200
length of query: 291
length of database: 14,973,337
effective HSP length: 98
effective length of query: 193
effective length of database: 8,840,693
effective search space: 1706253749
effective search space used: 1706253749
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)