BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022861
(291 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A1JRH9|AAEA_YERE8 p-hydroxybenzoic acid efflux pump subunit AaeA OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=aaeA PE=3 SV=1
Length = 311
Score = 35.0 bits (79), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 26 EINESSQWQDGIFYSLCAAYALVSSVALIQLIRIELRVPEYGWTTQKVFHLMNFIVNGVR 85
EI++S+ + + L A A V +A + L R +R P GW T H FI G
Sbjct: 123 EIDQSNNVLQTVRHQLAKAVA-VRDLAKLDLERTTVRAPAEGWVTNLNVHAGEFINRGAT 181
Query: 86 AVVF 89
AV
Sbjct: 182 AVAL 185
>sp|Q665H1|AAEA_YERPS p-hydroxybenzoic acid efflux pump subunit AaeA OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=aaeA
PE=3 SV=1
Length = 311
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 26 EINESSQWQDGIFYSLCAAYALVSSVALIQLIRIELRVPEYGWTTQKVFHLMNFIVNGVR 85
EI+++S + + L A A V +A + L R +R P GW T H FI G
Sbjct: 123 EIDQASNVLQTVQHQLAKAIA-VRDLARLDLERTTVRAPAEGWVTNLNVHAGEFINRGAT 181
Query: 86 AVVF 89
AV
Sbjct: 182 AVAL 185
>sp|A4THE9|AAEA_YERPP p-hydroxybenzoic acid efflux pump subunit AaeA OS=Yersinia pestis
(strain Pestoides F) GN=aaeA PE=3 SV=1
Length = 311
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 26 EINESSQWQDGIFYSLCAAYALVSSVALIQLIRIELRVPEYGWTTQKVFHLMNFIVNGVR 85
EI+++S + + L A A V +A + L R +R P GW T H FI G
Sbjct: 123 EIDQASNVLQTVQHQLAKAIA-VRDLARLDLERTTVRAPAEGWVTNLNVHAGEFINRGAT 181
Query: 86 AVVF 89
AV
Sbjct: 182 AVAL 185
>sp|Q1CDW6|AAEA_YERPN p-hydroxybenzoic acid efflux pump subunit AaeA OS=Yersinia pestis
bv. Antiqua (strain Nepal516) GN=aaeA PE=3 SV=1
Length = 311
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 26 EINESSQWQDGIFYSLCAAYALVSSVALIQLIRIELRVPEYGWTTQKVFHLMNFIVNGVR 85
EI+++S + + L A A V +A + L R +R P GW T H FI G
Sbjct: 123 EIDQASNVLQTVQHQLAKAIA-VRDLARLDLERTTVRAPAEGWVTNLNVHAGEFINRGAT 181
Query: 86 AVVF 89
AV
Sbjct: 182 AVAL 185
>sp|A9R1V9|AAEA_YERPG p-hydroxybenzoic acid efflux pump subunit AaeA OS=Yersinia pestis
bv. Antiqua (strain Angola) GN=aaeA PE=3 SV=1
Length = 311
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 26 EINESSQWQDGIFYSLCAAYALVSSVALIQLIRIELRVPEYGWTTQKVFHLMNFIVNGVR 85
EI+++S + + L A A V +A + L R +R P GW T H FI G
Sbjct: 123 EIDQASNVLQTVQHQLAKAIA-VRDLARLDLERTTVRAPAEGWVTNLNVHAGEFINRGAT 181
Query: 86 AVVF 89
AV
Sbjct: 182 AVAL 185
>sp|Q8ZAU9|AAEA_YERPE p-hydroxybenzoic acid efflux pump subunit AaeA OS=Yersinia pestis
GN=aaeA PE=3 SV=1
Length = 311
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 26 EINESSQWQDGIFYSLCAAYALVSSVALIQLIRIELRVPEYGWTTQKVFHLMNFIVNGVR 85
EI+++S + + L A A V +A + L R +R P GW T H FI G
Sbjct: 123 EIDQASNVLQTVQHQLAKAIA-VRDLARLDLERTTVRAPAEGWVTNLNVHAGEFINRGAT 181
Query: 86 AVVF 89
AV
Sbjct: 182 AVAL 185
>sp|B2K437|AAEA_YERPB p-hydroxybenzoic acid efflux pump subunit AaeA OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=aaeA
PE=3 SV=1
Length = 311
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 26 EINESSQWQDGIFYSLCAAYALVSSVALIQLIRIELRVPEYGWTTQKVFHLMNFIVNGVR 85
EI+++S + + L A A V +A + L R +R P GW T H FI G
Sbjct: 123 EIDQASNVLQTVQHQLAKAIA-VRDLARLDLERTTVRAPAEGWVTNLNVHAGEFINRGAT 181
Query: 86 AVVF 89
AV
Sbjct: 182 AVAL 185
>sp|Q1C1L2|AAEA_YERPA p-hydroxybenzoic acid efflux pump subunit AaeA OS=Yersinia pestis
bv. Antiqua (strain Antiqua) GN=aaeA PE=3 SV=1
Length = 311
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 26 EINESSQWQDGIFYSLCAAYALVSSVALIQLIRIELRVPEYGWTTQKVFHLMNFIVNGVR 85
EI+++S + + L A A V +A + L R +R P GW T H FI G
Sbjct: 123 EIDQASNVLQTVQHQLAKAIA-VRDLARLDLERTTVRAPAEGWVTNLNVHAGEFINRGAT 181
Query: 86 AVVF 89
AV
Sbjct: 182 AVAL 185
>sp|B1JKI2|AAEA_YERPY p-hydroxybenzoic acid efflux pump subunit AaeA OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=aaeA
PE=3 SV=1
Length = 311
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 26 EINESSQWQDGIFYSLCAAYALVSSVALIQLIRIELRVPEYGWTTQKVFHLMNFIVNGVR 85
EI+++S + + L A A V +A + L R +R P GW T H FI G
Sbjct: 123 EIDQASNVLQTVQHQLAKAIA-VRDLARLDLERTTVRAPAEGWVTNLNVHAGEFINRGAT 181
Query: 86 AVVF 89
AV
Sbjct: 182 AVAL 185
>sp|A7FDT5|AAEA_YERP3 p-hydroxybenzoic acid efflux pump subunit AaeA OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=aaeA PE=3 SV=1
Length = 311
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 26 EINESSQWQDGIFYSLCAAYALVSSVALIQLIRIELRVPEYGWTTQKVFHLMNFIVNGVR 85
EI+++S + + L A V ++A + L R +R P GW T H FI G
Sbjct: 123 EIDQASNVLQTVQHQLAKTIA-VRNLARLDLERTTIRAPAEGWVTNLNVHAGEFINRGAT 181
Query: 86 AVVF 89
AV
Sbjct: 182 AVAL 185
>sp|Q6U841|S4A10_HUMAN Sodium-driven chloride bicarbonate exchanger OS=Homo sapiens
GN=SLC4A10 PE=2 SV=1
Length = 1118
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 24/161 (14%)
Query: 67 GWTTQKVFHLMNFIVNGVRAVVFGFHMQVFLLHPKV----LTLVVLDLPGLLFFSTYTLL 122
G Q+V LM FI+ G + VF + F+ P + L + L G+ FF +
Sbjct: 905 GIREQRVTGLMIFILMG--SSVFMTSILKFIPMPVLYGVFLYMGASSLKGIQFFDR---I 959
Query: 123 VLFWAEIYHQA-----RSLPTDKLRIFYISVNGIIYFIQVCIWVYLWIDDSSAAEFIGKI 177
LFW HQ R +P K+ +F I IQ+ LWI S A + +
Sbjct: 960 KLFWMPAKHQPDFIYLRHVPLRKVHLFTI--------IQMSCLGLLWIIKVSRAAIVFPM 1011
Query: 178 FIAVVSFIAALGFLLYGGRLFFMLRRFPIESKGRRKKLHEV 218
+ + F+ L LL+ R L ESK +KKL +
Sbjct: 1012 MVLALVFVRKLMDLLFTKRELSWLDDLMPESK--KKKLEDA 1050
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.145 0.455
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,044,418
Number of Sequences: 539616
Number of extensions: 3878964
Number of successful extensions: 9739
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 9734
Number of HSP's gapped (non-prelim): 32
length of query: 291
length of database: 191,569,459
effective HSP length: 116
effective length of query: 175
effective length of database: 128,974,003
effective search space: 22570450525
effective search space used: 22570450525
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 61 (28.1 bits)