Query 022865
Match_columns 291
No_of_seqs 128 out of 1103
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 06:42:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022865.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022865hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0022 Alcohol dehydrogenase, 100.0 7.2E-56 1.6E-60 379.1 26.3 284 5-288 3-286 (375)
2 COG1062 AdhC Zn-dependent alco 100.0 1.6E-55 3.5E-60 382.5 26.6 280 8-291 1-280 (366)
3 COG1064 AdhP Zn-dependent alco 100.0 1.8E-55 3.9E-60 389.3 27.0 253 7-291 1-254 (339)
4 KOG0023 Alcohol dehydrogenase, 100.0 1.7E-48 3.6E-53 335.3 23.4 270 1-291 1-274 (360)
5 KOG0024 Sorbitol dehydrogenase 100.0 4.7E-48 1E-52 333.2 23.7 258 8-289 3-267 (354)
6 TIGR02818 adh_III_F_hyde S-(hy 100.0 7.4E-46 1.6E-50 340.6 30.8 281 9-290 1-281 (368)
7 cd08300 alcohol_DH_class_III c 100.0 5.3E-45 1.1E-49 334.9 31.2 282 8-290 1-282 (368)
8 PLN02740 Alcohol dehydrogenase 100.0 6E-45 1.3E-49 336.0 31.1 285 6-290 7-294 (381)
9 cd08301 alcohol_DH_plants Plan 100.0 1.2E-44 2.6E-49 332.6 30.9 283 8-290 1-283 (369)
10 cd08281 liver_ADH_like1 Zinc-d 100.0 2.9E-44 6.2E-49 330.4 29.7 276 10-289 1-284 (371)
11 TIGR03451 mycoS_dep_FDH mycoth 100.0 2.9E-43 6.4E-48 322.2 30.1 270 9-291 1-271 (358)
12 PLN02827 Alcohol dehydrogenase 100.0 4.3E-43 9.3E-48 323.3 30.9 279 8-290 11-289 (378)
13 cd08277 liver_alcohol_DH_like 100.0 6.7E-43 1.5E-47 320.6 30.4 280 8-290 1-280 (365)
14 cd08239 THR_DH_like L-threonin 100.0 2.1E-42 4.6E-47 314.0 28.3 253 10-288 1-255 (339)
15 COG1063 Tdh Threonine dehydrog 100.0 1.3E-41 2.8E-46 309.8 27.2 259 10-289 1-263 (350)
16 COG0604 Qor NADPH:quinone redu 100.0 8E-42 1.7E-46 307.7 24.8 231 10-291 1-236 (326)
17 PRK09880 L-idonate 5-dehydroge 100.0 2.4E-41 5.2E-46 307.9 26.8 255 8-289 3-260 (343)
18 TIGR02819 fdhA_non_GSH formald 100.0 3.2E-41 6.8E-46 311.9 27.6 262 9-291 2-294 (393)
19 cd08299 alcohol_DH_class_I_II_ 100.0 3.9E-40 8.5E-45 303.1 30.8 282 7-290 5-286 (373)
20 PLN02586 probable cinnamyl alc 100.0 2E-40 4.4E-45 303.6 26.8 263 5-289 8-272 (360)
21 cd05279 Zn_ADH1 Liver alcohol 100.0 3E-39 6.5E-44 296.5 30.3 277 10-288 1-278 (365)
22 TIGR03201 dearomat_had 6-hydro 100.0 3.3E-39 7.1E-44 294.5 27.1 252 13-289 2-266 (349)
23 cd08230 glucose_DH Glucose deh 100.0 3E-39 6.6E-44 295.3 25.8 251 10-289 1-263 (355)
24 TIGR02822 adh_fam_2 zinc-bindi 100.0 7E-39 1.5E-43 290.1 26.6 243 13-291 2-249 (329)
25 PLN02178 cinnamyl-alcohol dehy 100.0 1.2E-38 2.7E-43 293.2 27.8 257 12-291 9-268 (375)
26 PLN02514 cinnamyl-alcohol dehy 100.0 2.8E-38 6E-43 289.3 28.6 267 1-289 1-269 (357)
27 PRK10309 galactitol-1-phosphat 100.0 2.2E-38 4.8E-43 288.6 27.3 251 10-289 1-254 (347)
28 cd08233 butanediol_DH_like (2R 100.0 6E-38 1.3E-42 286.2 28.0 253 10-288 1-265 (351)
29 cd08231 MDR_TM0436_like Hypoth 100.0 8.7E-38 1.9E-42 286.1 28.9 263 11-288 2-273 (361)
30 KOG1197 Predicted quinone oxid 100.0 1.5E-38 3.2E-43 265.3 21.0 232 5-289 4-239 (336)
31 cd08285 NADP_ADH NADP(H)-depen 100.0 1.5E-37 3.2E-42 283.5 29.0 256 10-288 1-259 (351)
32 cd08278 benzyl_alcohol_DH Benz 100.0 2.3E-37 5E-42 283.9 28.9 276 8-288 1-278 (365)
33 cd08237 ribitol-5-phosphate_DH 100.0 2.4E-37 5.1E-42 281.4 23.3 239 9-291 2-251 (341)
34 cd08296 CAD_like Cinnamyl alco 100.0 2.4E-36 5.1E-41 273.8 28.3 251 10-288 1-252 (333)
35 PRK10083 putative oxidoreducta 100.0 2.2E-36 4.8E-41 274.3 27.6 251 10-288 1-252 (339)
36 cd08256 Zn_ADH2 Alcohol dehydr 100.0 5.2E-36 1.1E-40 273.3 28.6 254 10-288 1-267 (350)
37 cd05284 arabinose_DH_like D-ar 100.0 4.7E-36 1E-40 272.1 27.7 254 10-288 1-259 (340)
38 cd05278 FDH_like Formaldehyde 100.0 7.7E-36 1.7E-40 271.3 28.9 256 10-288 1-260 (347)
39 cd08279 Zn_ADH_class_III Class 100.0 1.1E-35 2.4E-40 272.6 29.8 274 10-288 1-275 (363)
40 cd08283 FDH_like_1 Glutathione 100.0 2.9E-35 6.2E-40 272.0 29.4 274 10-288 1-299 (386)
41 cd08286 FDH_like_ADH2 formalde 100.0 3E-35 6.5E-40 267.6 28.0 255 10-288 1-259 (345)
42 cd08240 6_hydroxyhexanoate_dh_ 100.0 4E-35 8.7E-40 267.4 27.9 255 10-288 1-267 (350)
43 cd08260 Zn_ADH6 Alcohol dehydr 100.0 6.6E-35 1.4E-39 265.4 29.0 255 10-288 1-257 (345)
44 cd08263 Zn_ADH10 Alcohol dehyd 100.0 9.6E-35 2.1E-39 266.7 30.0 276 10-288 1-280 (367)
45 cd08246 crotonyl_coA_red croto 100.0 3.8E-35 8.3E-40 271.7 26.7 260 6-288 9-308 (393)
46 PLN02702 L-idonate 5-dehydroge 100.0 1.3E-34 2.9E-39 265.5 28.9 257 8-288 16-278 (364)
47 cd08284 FDH_like_2 Glutathione 100.0 1.4E-34 3E-39 262.9 28.1 255 10-288 1-259 (344)
48 cd08238 sorbose_phosphate_red 100.0 6.5E-35 1.4E-39 271.7 26.5 247 8-289 1-282 (410)
49 cd08282 PFDH_like Pseudomonas 100.0 2.6E-34 5.7E-39 264.6 28.1 261 10-288 1-278 (375)
50 TIGR01751 crot-CoA-red crotony 100.0 2.4E-34 5.3E-39 266.9 27.3 260 6-288 4-303 (398)
51 PRK05396 tdh L-threonine 3-deh 100.0 3.2E-34 7E-39 260.5 27.5 252 10-288 1-256 (341)
52 cd08287 FDH_like_ADH3 formalde 100.0 1E-33 2.3E-38 257.4 28.0 252 10-288 1-261 (345)
53 PRK13771 putative alcohol dehy 100.0 4.3E-34 9.3E-39 258.7 25.3 247 10-288 1-248 (334)
54 PRK09422 ethanol-active dehydr 100.0 1.1E-33 2.4E-38 256.4 27.7 252 10-288 1-254 (338)
55 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.3E-33 2.8E-38 255.4 27.8 253 10-288 1-256 (338)
56 cd08261 Zn_ADH7 Alcohol dehydr 100.0 2E-33 4.4E-38 254.8 28.3 250 10-288 1-251 (337)
57 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1.9E-33 4.1E-38 259.7 28.3 255 9-288 28-300 (384)
58 cd05283 CAD1 Cinnamyl alcohol 100.0 9.5E-34 2.1E-38 257.2 25.7 255 11-288 1-256 (337)
59 TIGR01202 bchC 2-desacetyl-2-h 100.0 4.8E-34 1E-38 256.2 22.4 222 9-291 1-226 (308)
60 cd08235 iditol_2_DH_like L-idi 100.0 3.4E-33 7.4E-38 253.7 28.3 252 10-288 1-258 (343)
61 cd08291 ETR_like_1 2-enoyl thi 100.0 1.5E-33 3.2E-38 254.5 24.5 225 10-288 1-235 (324)
62 cd05285 sorbitol_DH Sorbitol d 100.0 3.2E-33 6.9E-38 254.3 26.9 253 12-288 1-258 (343)
63 cd08259 Zn_ADH5 Alcohol dehydr 100.0 4.6E-33 9.9E-38 251.1 27.4 248 10-288 1-249 (332)
64 cd08264 Zn_ADH_like2 Alcohol d 100.0 3.7E-33 7.9E-38 251.7 26.1 244 10-288 1-246 (325)
65 cd08262 Zn_ADH8 Alcohol dehydr 100.0 5.7E-33 1.2E-37 252.2 27.3 242 10-288 1-257 (341)
66 cd08297 CAD3 Cinnamyl alcohol 100.0 1.1E-32 2.5E-37 250.2 28.7 253 10-288 1-258 (341)
67 cd08242 MDR_like Medium chain 100.0 7.4E-33 1.6E-37 249.1 26.3 238 10-288 1-238 (319)
68 cd08298 CAD2 Cinnamyl alcohol 100.0 1.2E-32 2.7E-37 248.6 27.5 244 10-288 1-249 (329)
69 cd08236 sugar_DH NAD(P)-depend 100.0 1.4E-32 3E-37 249.8 27.6 250 10-288 1-251 (343)
70 TIGR03366 HpnZ_proposed putati 100.0 2E-33 4.4E-38 248.9 21.5 203 66-288 1-211 (280)
71 cd08292 ETR_like_2 2-enoyl thi 100.0 9.7E-33 2.1E-37 248.4 25.4 225 10-288 1-231 (324)
72 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.2E-32 4.8E-37 245.2 27.5 252 10-288 1-257 (306)
73 cd08293 PTGR2 Prostaglandin re 100.0 1.1E-32 2.3E-37 250.7 25.5 213 22-288 23-247 (345)
74 cd05281 TDH Threonine dehydrog 100.0 2.8E-32 6E-37 247.9 27.0 251 10-288 1-255 (341)
75 cd08266 Zn_ADH_like1 Alcohol d 100.0 5.3E-32 1.2E-36 244.3 26.9 253 10-288 1-258 (342)
76 cd08234 threonine_DH_like L-th 100.0 7E-32 1.5E-36 244.1 27.2 250 10-288 1-250 (334)
77 cd08245 CAD Cinnamyl alcohol d 100.0 1.2E-31 2.7E-36 242.2 26.6 248 11-288 1-249 (330)
78 KOG0025 Zn2+-binding dehydroge 100.0 3.4E-32 7.4E-37 231.0 21.3 233 5-289 15-257 (354)
79 TIGR02817 adh_fam_1 zinc-bindi 100.0 7.7E-32 1.7E-36 244.0 23.9 230 11-291 1-242 (336)
80 cd08232 idonate-5-DH L-idonate 100.0 1.8E-31 3.9E-36 242.1 26.3 249 14-288 2-255 (339)
81 cd08294 leukotriene_B4_DH_like 100.0 1.6E-31 3.5E-36 241.1 24.8 218 9-288 2-234 (329)
82 TIGR00692 tdh L-threonine 3-de 100.0 2.3E-31 5E-36 241.7 26.0 247 15-288 4-254 (340)
83 cd08295 double_bond_reductase_ 100.0 1.3E-31 2.8E-36 243.2 23.9 227 7-288 5-244 (338)
84 PLN03154 putative allyl alcoho 100.0 3.7E-31 7.9E-36 241.4 26.2 229 6-289 5-252 (348)
85 cd08290 ETR 2-enoyl thioester 100.0 3.3E-31 7.2E-36 240.4 24.3 229 10-288 1-244 (341)
86 PRK10754 quinone oxidoreductas 100.0 6.1E-31 1.3E-35 237.4 25.3 228 9-288 1-232 (327)
87 TIGR02825 B4_12hDH leukotriene 100.0 6E-31 1.3E-35 237.6 24.4 207 21-288 18-230 (325)
88 cd08274 MDR9 Medium chain dehy 100.0 1.2E-30 2.7E-35 237.4 25.2 241 10-288 1-266 (350)
89 cd08249 enoyl_reductase_like e 100.0 7.5E-31 1.6E-35 238.4 22.4 232 10-287 1-244 (339)
90 PTZ00354 alcohol dehydrogenase 100.0 1.3E-29 2.7E-34 228.8 25.5 228 9-288 1-233 (334)
91 cd08276 MDR7 Medium chain dehy 100.0 2.6E-29 5.7E-34 226.8 27.3 248 10-288 1-252 (336)
92 cd08244 MDR_enoyl_red Possible 100.0 2.1E-29 4.5E-34 226.6 25.9 227 10-288 1-234 (324)
93 cd05188 MDR Medium chain reduc 100.0 1.4E-29 2.9E-34 221.4 23.9 223 36-288 1-225 (271)
94 cd08250 Mgc45594_like Mgc45594 100.0 1.9E-29 4.2E-34 227.7 25.2 224 9-288 1-230 (329)
95 cd08252 AL_MDR Arginate lyase 100.0 2.9E-29 6.2E-34 227.1 25.5 229 10-288 1-241 (336)
96 cd08248 RTN4I1 Human Reticulon 100.0 1.9E-29 4.2E-34 229.5 23.6 226 10-288 1-250 (350)
97 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 4.7E-29 1E-33 224.4 25.6 229 10-288 1-236 (325)
98 cd08289 MDR_yhfp_like Yhfp put 100.0 4.9E-29 1.1E-33 224.6 24.3 229 10-288 1-236 (326)
99 cd08243 quinone_oxidoreductase 100.0 5.6E-29 1.2E-33 223.0 24.4 228 10-288 1-231 (320)
100 KOG1198 Zinc-binding oxidoredu 100.0 2.5E-29 5.5E-34 227.1 20.5 215 22-289 20-249 (347)
101 cd05282 ETR_like 2-enoyl thioe 100.0 9.6E-29 2.1E-33 222.2 23.5 214 22-288 14-230 (323)
102 TIGR02823 oxido_YhdH putative 100.0 2.7E-28 5.9E-33 219.6 25.4 227 11-288 1-234 (323)
103 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1.9E-28 4E-33 219.3 23.9 213 21-288 6-222 (312)
104 cd08247 AST1_like AST1 is a cy 100.0 6.7E-28 1.5E-32 219.9 25.8 233 11-288 2-252 (352)
105 cd08271 MDR5 Medium chain dehy 100.0 8.7E-28 1.9E-32 215.7 25.9 228 10-288 1-232 (325)
106 cd08270 MDR4 Medium chain dehy 100.0 6.3E-28 1.4E-32 215.3 23.7 213 10-288 1-215 (305)
107 cd08253 zeta_crystallin Zeta-c 100.0 1.1E-27 2.3E-32 214.4 24.6 231 10-288 1-236 (325)
108 cd05276 p53_inducible_oxidored 100.0 1.3E-27 2.8E-32 213.5 24.4 226 10-288 1-231 (323)
109 cd08272 MDR6 Medium chain dehy 100.0 1.6E-27 3.5E-32 213.7 24.5 229 10-288 1-234 (326)
110 cd05286 QOR2 Quinone oxidoredu 100.0 2.6E-27 5.5E-32 211.3 25.3 224 11-288 1-228 (320)
111 cd08288 MDR_yhdh Yhdh putative 100.0 2.4E-27 5.3E-32 213.4 24.7 228 10-288 1-235 (324)
112 COG2130 Putative NADP-dependen 100.0 1.6E-27 3.5E-32 204.4 21.5 211 21-288 26-242 (340)
113 cd08273 MDR8 Medium chain dehy 100.0 3E-27 6.5E-32 213.3 24.1 221 11-288 2-226 (331)
114 cd05288 PGDH Prostaglandin deh 100.0 1.4E-26 3E-31 208.9 24.7 220 11-288 3-237 (329)
115 cd08268 MDR2 Medium chain dehy 100.0 2.9E-26 6.3E-31 205.5 25.5 231 10-288 1-236 (328)
116 TIGR02824 quinone_pig3 putativ 100.0 3.4E-26 7.4E-31 204.8 24.9 226 10-288 1-231 (325)
117 cd08251 polyketide_synthase po 100.0 2.2E-26 4.7E-31 204.3 22.6 208 29-288 2-212 (303)
118 cd05289 MDR_like_2 alcohol deh 99.9 4.4E-26 9.5E-31 202.7 22.6 224 10-288 1-231 (309)
119 cd08241 QOR1 Quinone oxidoredu 99.9 1.7E-25 3.7E-30 199.9 24.3 225 10-288 1-231 (323)
120 cd05195 enoyl_red enoyl reduct 99.9 8.4E-26 1.8E-30 198.6 20.8 198 35-288 1-202 (293)
121 cd08275 MDR3 Medium chain dehy 99.9 5.8E-25 1.3E-29 198.3 24.8 224 11-288 1-229 (337)
122 cd08267 MDR1 Medium chain dehy 99.9 2.6E-25 5.7E-30 199.1 21.0 213 23-288 15-233 (319)
123 smart00829 PKS_ER Enoylreducta 99.9 2.1E-24 4.7E-29 189.6 20.2 193 39-288 2-198 (288)
124 PF08240 ADH_N: Alcohol dehydr 99.9 1.4E-22 3E-27 154.4 9.5 108 34-163 1-109 (109)
125 cd08255 2-desacetyl-2-hydroxye 99.9 4.1E-21 9E-26 169.3 17.8 163 62-288 19-183 (277)
126 KOG1196 Predicted NAD-dependen 99.9 3.2E-20 6.9E-25 159.1 21.1 207 25-288 27-246 (343)
127 KOG1202 Animal-type fatty acid 99.8 1E-19 2.2E-24 177.3 13.1 206 22-291 1429-1650(2376)
128 PF00107 ADH_zinc_N: Zinc-bind 99.5 2.8E-13 6E-18 105.9 9.0 82 205-289 1-83 (130)
129 PRK09424 pntA NAD(P) transhydr 99.0 2.6E-09 5.7E-14 101.1 11.2 97 192-289 162-279 (509)
130 cd00401 AdoHcyase S-adenosyl-L 98.6 2.8E-07 6E-12 85.4 11.2 92 183-288 189-282 (413)
131 TIGR00561 pntA NAD(P) transhyd 98.4 2.5E-06 5.4E-11 80.9 10.2 95 193-288 162-277 (511)
132 PRK05476 S-adenosyl-L-homocyst 98.1 2.6E-05 5.6E-10 72.6 11.1 93 182-288 198-292 (425)
133 cd05213 NAD_bind_Glutamyl_tRNA 98.0 1.7E-05 3.7E-10 71.4 7.3 109 158-277 139-251 (311)
134 TIGR01035 hemA glutamyl-tRNA r 98.0 5.8E-07 1.3E-11 84.1 -2.6 161 65-277 88-253 (417)
135 TIGR00936 ahcY adenosylhomocys 98.0 6.8E-05 1.5E-09 69.4 11.0 91 184-288 183-275 (406)
136 PRK08306 dipicolinate synthase 97.9 0.00012 2.6E-09 65.4 11.0 84 194-288 151-234 (296)
137 PLN02494 adenosylhomocysteinas 97.9 0.00011 2.3E-09 68.9 10.5 93 183-289 241-335 (477)
138 PRK11873 arsM arsenite S-adeno 97.8 4.5E-05 9.9E-10 67.2 6.6 93 189-290 72-177 (272)
139 PRK00517 prmA ribosomal protei 97.8 0.00027 5.8E-09 61.6 10.9 123 149-289 79-207 (250)
140 PF11017 DUF2855: Protein of u 97.7 0.0012 2.6E-08 58.9 14.4 127 148-287 90-222 (314)
141 PRK12771 putative glutamate sy 97.7 4.9E-05 1.1E-09 74.0 6.0 81 191-277 133-235 (564)
142 PF01488 Shikimate_DH: Shikima 97.6 0.00032 6.9E-09 55.2 7.5 73 194-275 11-86 (135)
143 TIGR00518 alaDH alanine dehydr 97.6 0.00038 8.3E-09 64.1 9.0 88 194-288 166-260 (370)
144 COG2518 Pcm Protein-L-isoaspar 97.5 0.00031 6.8E-09 58.8 7.3 95 186-289 64-163 (209)
145 PTZ00075 Adenosylhomocysteinas 97.5 0.00076 1.6E-08 63.5 10.7 83 192-288 251-334 (476)
146 PRK00045 hemA glutamyl-tRNA re 97.5 0.00037 8E-09 65.4 8.7 90 178-277 162-255 (423)
147 PRK08324 short chain dehydroge 97.5 0.00061 1.3E-08 67.9 10.2 113 148-273 386-507 (681)
148 COG4221 Short-chain alcohol de 97.4 0.0013 2.7E-08 56.3 9.0 79 194-274 5-91 (246)
149 PRK05993 short chain dehydroge 97.3 0.0022 4.7E-08 56.5 10.4 78 194-273 3-85 (277)
150 TIGR02853 spore_dpaA dipicolin 97.3 0.0016 3.5E-08 57.9 9.2 83 194-287 150-232 (287)
151 TIGR00406 prmA ribosomal prote 97.3 0.00095 2.1E-08 59.4 7.7 89 192-289 157-253 (288)
152 COG1748 LYS9 Saccharopine dehy 97.3 0.0024 5.3E-08 58.7 10.4 86 196-287 2-91 (389)
153 PRK04148 hypothetical protein; 97.2 0.0036 7.7E-08 48.9 9.2 52 192-245 14-65 (134)
154 PRK06182 short chain dehydroge 97.1 0.0029 6.2E-08 55.5 9.2 79 194-274 2-84 (273)
155 PRK05693 short chain dehydroge 97.1 0.003 6.5E-08 55.4 9.2 77 196-274 2-82 (274)
156 PRK00377 cbiT cobalt-precorrin 97.0 0.0048 1E-07 51.7 9.2 96 188-288 34-138 (198)
157 COG0300 DltE Short-chain dehyd 97.0 0.0057 1.2E-07 53.4 9.7 81 193-274 4-94 (265)
158 PRK08017 oxidoreductase; Provi 97.0 0.0054 1.2E-07 52.9 9.7 77 196-274 3-84 (256)
159 PF01262 AlaDh_PNT_C: Alanine 97.0 0.0028 6E-08 51.7 6.9 47 195-242 20-66 (168)
160 PF13460 NAD_binding_10: NADH( 97.0 0.0072 1.6E-07 49.5 9.4 83 198-288 1-88 (183)
161 PRK13943 protein-L-isoaspartat 96.9 0.006 1.3E-07 55.1 9.5 96 187-288 73-173 (322)
162 COG3967 DltE Short-chain dehyd 96.9 0.0061 1.3E-07 50.8 8.3 77 195-273 5-87 (245)
163 PRK11705 cyclopropane fatty ac 96.9 0.0039 8.4E-08 57.8 8.0 99 182-289 155-261 (383)
164 PRK07060 short chain dehydroge 96.9 0.011 2.3E-07 50.7 10.1 77 194-274 8-87 (245)
165 TIGR00438 rrmJ cell division p 96.8 0.013 2.9E-07 48.5 10.2 95 189-290 27-140 (188)
166 PRK13940 glutamyl-tRNA reducta 96.8 0.0079 1.7E-07 56.2 9.5 76 193-277 179-255 (414)
167 PRK06057 short chain dehydroge 96.8 0.0091 2E-07 51.7 9.4 79 194-274 6-89 (255)
168 PRK08177 short chain dehydroge 96.8 0.0097 2.1E-07 50.5 9.4 77 196-274 2-81 (225)
169 PRK06139 short chain dehydroge 96.8 0.0065 1.4E-07 55.1 8.5 79 194-274 6-94 (330)
170 PF00670 AdoHcyase_NAD: S-aden 96.7 0.0074 1.6E-07 48.7 7.6 83 192-288 20-103 (162)
171 COG2242 CobL Precorrin-6B meth 96.7 0.017 3.7E-07 47.5 9.7 97 188-291 28-130 (187)
172 PRK06953 short chain dehydroge 96.7 0.013 2.8E-07 49.6 9.6 77 196-274 2-80 (222)
173 TIGR01809 Shik-DH-AROM shikima 96.7 0.0055 1.2E-07 54.4 7.4 42 194-235 124-165 (282)
174 PRK03369 murD UDP-N-acetylmura 96.7 0.011 2.4E-07 56.6 9.8 74 192-276 9-82 (488)
175 PRK12742 oxidoreductase; Provi 96.7 0.015 3.3E-07 49.5 9.7 77 194-274 5-85 (237)
176 PRK05872 short chain dehydroge 96.6 0.013 2.8E-07 52.2 9.3 79 194-274 8-95 (296)
177 PRK12828 short chain dehydroge 96.6 0.012 2.7E-07 49.9 8.8 79 194-274 6-92 (239)
178 TIGR03325 BphB_TodD cis-2,3-di 96.6 0.012 2.6E-07 51.2 8.8 78 194-273 4-88 (262)
179 PRK06200 2,3-dihydroxy-2,3-dih 96.6 0.013 2.9E-07 50.9 9.0 80 194-274 5-90 (263)
180 PRK12829 short chain dehydroge 96.6 0.011 2.5E-07 51.1 8.6 82 192-275 8-97 (264)
181 TIGR02356 adenyl_thiF thiazole 96.6 0.023 4.9E-07 47.9 10.0 35 194-228 20-54 (202)
182 COG0169 AroE Shikimate 5-dehyd 96.6 0.0067 1.4E-07 53.6 6.9 43 194-236 125-167 (283)
183 PRK07814 short chain dehydroge 96.6 0.013 2.8E-07 51.1 8.7 79 194-274 9-97 (263)
184 PRK06949 short chain dehydroge 96.6 0.014 3E-07 50.4 8.9 80 193-274 7-96 (258)
185 PRK05786 fabG 3-ketoacyl-(acyl 96.6 0.015 3.2E-07 49.6 9.0 80 194-274 4-91 (238)
186 KOG1209 1-Acyl dihydroxyaceton 96.6 0.015 3.3E-07 48.8 8.4 80 194-274 6-91 (289)
187 PRK07825 short chain dehydroge 96.6 0.017 3.6E-07 50.6 9.3 78 195-274 5-88 (273)
188 PRK12549 shikimate 5-dehydroge 96.5 0.027 5.9E-07 50.0 10.4 42 194-235 126-167 (284)
189 PRK08339 short chain dehydroge 96.5 0.019 4.2E-07 50.1 9.4 79 194-274 7-95 (263)
190 PRK05867 short chain dehydroge 96.5 0.015 3.3E-07 50.2 8.6 79 194-274 8-96 (253)
191 PRK06180 short chain dehydroge 96.5 0.017 3.8E-07 50.7 9.0 78 195-274 4-88 (277)
192 PRK12550 shikimate 5-dehydroge 96.5 0.021 4.5E-07 50.4 9.3 44 192-235 119-162 (272)
193 PF02826 2-Hacid_dh_C: D-isome 96.5 0.02 4.3E-07 47.2 8.7 46 193-239 34-79 (178)
194 PRK07326 short chain dehydroge 96.5 0.019 4.2E-07 48.8 8.9 80 194-274 5-92 (237)
195 PRK06841 short chain dehydroge 96.4 0.019 4.2E-07 49.5 8.9 79 194-274 14-99 (255)
196 PRK07831 short chain dehydroge 96.4 0.02 4.4E-07 49.7 9.0 81 192-274 14-107 (262)
197 PRK06196 oxidoreductase; Provi 96.4 0.024 5.3E-07 50.8 9.7 79 194-274 25-109 (315)
198 PRK07024 short chain dehydroge 96.4 0.024 5.2E-07 49.1 9.2 78 195-274 2-88 (257)
199 TIGR02469 CbiT precorrin-6Y C5 96.4 0.035 7.5E-07 42.1 9.0 96 188-288 13-115 (124)
200 PLN02780 ketoreductase/ oxidor 96.3 0.029 6.3E-07 50.7 9.7 80 194-274 52-142 (320)
201 TIGR01318 gltD_gamma_fam gluta 96.3 0.021 4.5E-07 54.4 9.1 78 194-276 140-238 (467)
202 PRK08217 fabG 3-ketoacyl-(acyl 96.3 0.025 5.5E-07 48.5 8.9 80 194-274 4-92 (253)
203 PRK07231 fabG 3-ketoacyl-(acyl 96.3 0.024 5.3E-07 48.6 8.8 80 194-274 4-91 (251)
204 PLN03209 translocon at the inn 96.3 0.025 5.5E-07 54.7 9.5 47 188-235 73-120 (576)
205 PRK07062 short chain dehydroge 96.3 0.021 4.6E-07 49.6 8.5 79 194-274 7-97 (265)
206 PRK14027 quinate/shikimate deh 96.3 0.043 9.2E-07 48.7 10.3 42 194-235 126-167 (283)
207 PRK05866 short chain dehydroge 96.3 0.027 5.9E-07 50.1 9.1 80 194-274 39-127 (293)
208 PRK13942 protein-L-isoaspartat 96.3 0.045 9.7E-07 46.4 9.9 96 186-289 68-170 (212)
209 PRK08628 short chain dehydroge 96.3 0.026 5.5E-07 48.8 8.7 80 194-274 6-93 (258)
210 PRK12809 putative oxidoreducta 96.3 0.024 5.1E-07 56.2 9.3 76 194-275 309-406 (639)
211 PRK09072 short chain dehydroge 96.2 0.035 7.6E-07 48.2 9.5 80 194-274 4-90 (263)
212 PRK06500 short chain dehydroge 96.2 0.03 6.4E-07 48.0 8.9 79 194-274 5-90 (249)
213 PRK07109 short chain dehydroge 96.2 0.027 5.8E-07 51.2 9.0 79 194-274 7-95 (334)
214 PRK09291 short chain dehydroge 96.2 0.03 6.5E-07 48.3 8.9 73 195-273 2-82 (257)
215 PF03435 Saccharop_dh: Sacchar 96.2 0.027 5.9E-07 52.1 9.1 85 198-286 1-89 (386)
216 TIGR01832 kduD 2-deoxy-D-gluco 96.2 0.033 7.2E-07 47.8 9.2 79 194-274 4-90 (248)
217 PRK07774 short chain dehydroge 96.2 0.031 6.8E-07 47.9 8.9 80 194-274 5-93 (250)
218 PRK07890 short chain dehydroge 96.2 0.034 7.4E-07 47.9 9.2 79 194-274 4-92 (258)
219 PRK00536 speE spermidine synth 96.2 0.015 3.2E-07 50.9 6.7 94 193-289 71-165 (262)
220 PRK08265 short chain dehydroge 96.2 0.031 6.8E-07 48.6 8.9 79 194-274 5-90 (261)
221 PRK06463 fabG 3-ketoacyl-(acyl 96.2 0.032 7E-07 48.2 8.9 79 194-274 6-89 (255)
222 PRK07478 short chain dehydroge 96.2 0.033 7.2E-07 48.1 8.9 79 194-274 5-93 (254)
223 PRK07576 short chain dehydroge 96.2 0.034 7.4E-07 48.5 9.0 78 194-273 8-95 (264)
224 PRK00258 aroE shikimate 5-dehy 96.2 0.018 3.9E-07 51.0 7.2 43 193-235 121-163 (278)
225 PRK06505 enoyl-(acyl carrier p 96.2 0.044 9.5E-07 48.1 9.7 79 194-274 6-95 (271)
226 PRK06483 dihydromonapterin red 96.2 0.045 9.7E-07 46.7 9.5 78 195-274 2-84 (236)
227 PRK08589 short chain dehydroge 96.2 0.031 6.7E-07 49.0 8.7 79 194-274 5-92 (272)
228 PRK07454 short chain dehydroge 96.1 0.048 1E-06 46.6 9.5 80 194-274 5-93 (241)
229 PRK12475 thiamine/molybdopteri 96.1 0.046 1E-06 49.8 9.8 35 195-229 24-58 (338)
230 PRK05854 short chain dehydroge 96.1 0.04 8.7E-07 49.5 9.3 79 194-274 13-103 (313)
231 PRK12939 short chain dehydroge 96.1 0.037 8E-07 47.4 8.8 79 194-274 6-94 (250)
232 PRK07533 enoyl-(acyl carrier p 96.1 0.05 1.1E-06 47.3 9.6 80 194-274 9-98 (258)
233 PRK07523 gluconate 5-dehydroge 96.1 0.039 8.4E-07 47.7 8.8 79 194-274 9-97 (255)
234 PRK12481 2-deoxy-D-gluconate 3 96.1 0.034 7.4E-07 48.1 8.5 79 194-274 7-93 (251)
235 PRK12548 shikimate 5-dehydroge 96.1 0.054 1.2E-06 48.2 9.8 36 194-229 125-160 (289)
236 PRK06138 short chain dehydroge 96.1 0.035 7.6E-07 47.7 8.5 80 194-274 4-91 (252)
237 PRK06194 hypothetical protein; 96.0 0.046 9.9E-07 48.1 9.3 79 195-274 6-93 (287)
238 PRK08213 gluconate 5-dehydroge 96.0 0.043 9.2E-07 47.5 9.0 79 194-274 11-99 (259)
239 PRK05884 short chain dehydroge 96.0 0.057 1.2E-06 45.9 9.6 74 197-273 2-78 (223)
240 PRK08643 acetoin reductase; Va 96.0 0.039 8.5E-07 47.6 8.7 78 195-274 2-89 (256)
241 PRK07063 short chain dehydroge 96.0 0.039 8.5E-07 47.8 8.7 79 194-274 6-96 (260)
242 COG4122 Predicted O-methyltran 96.0 0.08 1.7E-06 45.0 10.1 100 188-289 53-160 (219)
243 PRK06179 short chain dehydroge 96.0 0.026 5.6E-07 49.2 7.5 76 195-274 4-83 (270)
244 PRK07453 protochlorophyllide o 96.0 0.043 9.3E-07 49.4 9.1 78 194-273 5-92 (322)
245 PRK06172 short chain dehydroge 96.0 0.043 9.4E-07 47.3 8.7 80 194-274 6-94 (253)
246 PRK06079 enoyl-(acyl carrier p 96.0 0.047 1E-06 47.3 8.9 79 194-274 6-93 (252)
247 PF12847 Methyltransf_18: Meth 96.0 0.036 7.8E-07 41.3 7.2 87 194-288 1-104 (112)
248 PRK08267 short chain dehydroge 96.0 0.065 1.4E-06 46.4 9.8 77 196-274 2-87 (260)
249 PRK08703 short chain dehydroge 96.0 0.034 7.3E-07 47.5 7.9 80 194-274 5-97 (239)
250 PRK12823 benD 1,6-dihydroxycyc 96.0 0.037 7.9E-07 47.9 8.2 78 194-273 7-93 (260)
251 PRK12769 putative oxidoreducta 96.0 0.035 7.7E-07 55.1 9.0 76 193-274 325-422 (654)
252 PRK07677 short chain dehydroge 96.0 0.047 1E-06 47.1 8.8 79 195-274 1-88 (252)
253 PRK05717 oxidoreductase; Valid 96.0 0.05 1.1E-06 47.0 9.0 79 194-274 9-94 (255)
254 PRK05653 fabG 3-ketoacyl-(acyl 95.9 0.062 1.3E-06 45.7 9.5 79 194-274 4-92 (246)
255 PRK08226 short chain dehydroge 95.9 0.049 1.1E-06 47.2 8.9 79 194-274 5-92 (263)
256 PRK07856 short chain dehydroge 95.9 0.035 7.6E-07 47.9 7.9 75 194-274 5-85 (252)
257 PRK06198 short chain dehydroge 95.9 0.05 1.1E-06 47.0 8.9 80 194-274 5-94 (260)
258 PRK08644 thiamine biosynthesis 95.9 0.065 1.4E-06 45.5 9.2 34 195-228 28-61 (212)
259 PRK08862 short chain dehydroge 95.9 0.064 1.4E-06 45.8 9.4 79 194-273 4-92 (227)
260 PRK15116 sulfur acceptor prote 95.9 0.12 2.5E-06 45.5 11.0 35 194-228 29-63 (268)
261 PRK05876 short chain dehydroge 95.9 0.046 1E-06 48.1 8.7 80 194-274 5-93 (275)
262 PRK06197 short chain dehydroge 95.9 0.051 1.1E-06 48.5 9.1 79 194-274 15-105 (306)
263 PRK08264 short chain dehydroge 95.9 0.05 1.1E-06 46.3 8.7 76 194-274 5-83 (238)
264 PRK06482 short chain dehydroge 95.9 0.052 1.1E-06 47.5 9.0 77 196-274 3-86 (276)
265 PRK06181 short chain dehydroge 95.9 0.052 1.1E-06 47.1 8.8 78 196-274 2-88 (263)
266 PLN02253 xanthoxin dehydrogena 95.9 0.046 9.9E-07 48.0 8.5 79 194-274 17-104 (280)
267 PRK08261 fabG 3-ketoacyl-(acyl 95.9 0.076 1.6E-06 50.2 10.5 78 194-273 209-293 (450)
268 PRK07035 short chain dehydroge 95.9 0.052 1.1E-06 46.7 8.7 79 194-274 7-95 (252)
269 cd05311 NAD_bind_2_malic_enz N 95.9 0.07 1.5E-06 45.7 9.3 70 193-273 23-106 (226)
270 COG0373 HemA Glutamyl-tRNA red 95.9 0.061 1.3E-06 50.0 9.4 73 194-276 177-250 (414)
271 PRK07904 short chain dehydroge 95.9 0.076 1.6E-06 46.0 9.7 81 192-274 5-97 (253)
272 PF02254 TrkA_N: TrkA-N domain 95.9 0.18 3.9E-06 37.9 10.7 84 198-286 1-84 (116)
273 PRK06125 short chain dehydroge 95.9 0.098 2.1E-06 45.3 10.4 78 194-274 6-91 (259)
274 PRK07074 short chain dehydroge 95.9 0.061 1.3E-06 46.4 9.1 78 195-274 2-87 (257)
275 PRK12749 quinate/shikimate deh 95.8 0.067 1.5E-06 47.6 9.4 36 194-229 123-158 (288)
276 KOG0725 Reductases with broad 95.8 0.052 1.1E-06 47.8 8.7 79 194-274 7-99 (270)
277 PRK07688 thiamine/molybdopteri 95.8 0.069 1.5E-06 48.7 9.6 34 195-228 24-57 (339)
278 PRK08340 glucose-1-dehydrogena 95.8 0.06 1.3E-06 46.7 8.9 77 197-274 2-86 (259)
279 cd01075 NAD_bind_Leu_Phe_Val_D 95.8 0.079 1.7E-06 44.5 9.3 46 194-240 27-73 (200)
280 PF01135 PCMT: Protein-L-isoas 95.8 0.013 2.8E-07 49.6 4.5 97 186-288 64-165 (209)
281 PRK09186 flagellin modificatio 95.8 0.058 1.3E-06 46.4 8.8 78 194-273 3-92 (256)
282 PRK09242 tropinone reductase; 95.8 0.062 1.3E-06 46.4 8.9 79 194-274 8-98 (257)
283 PRK07067 sorbitol dehydrogenas 95.8 0.063 1.4E-06 46.4 9.0 79 195-274 6-90 (257)
284 PRK13394 3-hydroxybutyrate deh 95.8 0.059 1.3E-06 46.5 8.8 80 194-274 6-94 (262)
285 PRK08277 D-mannonate oxidoredu 95.8 0.059 1.3E-06 47.2 8.9 78 194-273 9-96 (278)
286 KOG1014 17 beta-hydroxysteroid 95.8 0.077 1.7E-06 47.1 9.3 79 193-274 47-136 (312)
287 PRK06114 short chain dehydroge 95.8 0.062 1.4E-06 46.4 8.9 80 194-274 7-96 (254)
288 cd00755 YgdL_like Family of ac 95.8 0.08 1.7E-06 45.5 9.3 35 195-229 11-45 (231)
289 PRK10538 malonic semialdehyde 95.8 0.066 1.4E-06 46.1 8.9 76 197-274 2-84 (248)
290 PRK06398 aldose dehydrogenase; 95.7 0.036 7.7E-07 48.2 7.2 74 194-274 5-82 (258)
291 PRK13944 protein-L-isoaspartat 95.7 0.046 9.9E-07 46.1 7.6 96 186-289 64-167 (205)
292 TIGR02355 moeB molybdopterin s 95.7 0.072 1.6E-06 46.1 8.9 35 195-229 24-58 (240)
293 COG2264 PrmA Ribosomal protein 95.7 0.065 1.4E-06 47.6 8.7 121 157-288 129-256 (300)
294 PRK08085 gluconate 5-dehydroge 95.7 0.078 1.7E-06 45.7 9.2 79 194-274 8-96 (254)
295 PRK06914 short chain dehydroge 95.7 0.07 1.5E-06 46.7 9.0 77 195-274 3-91 (280)
296 cd01078 NAD_bind_H4MPT_DH NADP 95.7 0.1 2.3E-06 43.3 9.6 76 194-276 27-109 (194)
297 PRK07577 short chain dehydroge 95.7 0.052 1.1E-06 46.0 8.0 73 194-274 2-78 (234)
298 PRK06720 hypothetical protein; 95.7 0.086 1.9E-06 43.0 8.8 80 194-274 15-103 (169)
299 PRK05875 short chain dehydroge 95.7 0.072 1.6E-06 46.6 9.0 79 194-274 6-96 (276)
300 PF00106 adh_short: short chai 95.7 0.034 7.3E-07 44.6 6.4 79 196-274 1-90 (167)
301 cd01065 NAD_bind_Shikimate_DH 95.7 0.08 1.7E-06 42.1 8.5 74 193-275 17-92 (155)
302 PRK08251 short chain dehydroge 95.7 0.075 1.6E-06 45.5 8.9 77 195-273 2-90 (248)
303 PRK05690 molybdopterin biosynt 95.7 0.078 1.7E-06 46.0 8.9 35 195-229 32-66 (245)
304 PRK08993 2-deoxy-D-gluconate 3 95.7 0.075 1.6E-06 45.9 8.9 80 194-274 9-95 (253)
305 cd01080 NAD_bind_m-THF_DH_Cycl 95.7 0.078 1.7E-06 43.3 8.3 53 192-247 41-95 (168)
306 PRK12936 3-ketoacyl-(acyl-carr 95.7 0.08 1.7E-06 45.2 9.0 80 194-274 5-90 (245)
307 PRK00107 gidB 16S rRNA methylt 95.7 0.032 7E-07 46.4 6.2 91 192-289 43-139 (187)
308 PRK12429 3-hydroxybutyrate deh 95.7 0.062 1.3E-06 46.2 8.3 80 194-274 3-91 (258)
309 PRK12384 sorbitol-6-phosphate 95.6 0.068 1.5E-06 46.2 8.5 79 195-274 2-91 (259)
310 PRK14967 putative methyltransf 95.6 0.12 2.6E-06 44.0 9.9 47 189-237 31-77 (223)
311 COG2227 UbiG 2-polyprenyl-3-me 95.6 0.087 1.9E-06 45.1 8.7 90 193-289 58-155 (243)
312 cd00757 ThiF_MoeB_HesA_family 95.6 0.12 2.5E-06 44.4 9.8 35 195-229 21-55 (228)
313 PRK12826 3-ketoacyl-(acyl-carr 95.6 0.071 1.5E-06 45.6 8.5 80 194-274 5-93 (251)
314 cd01483 E1_enzyme_family Super 95.6 0.13 2.8E-06 40.5 9.3 32 197-228 1-32 (143)
315 CHL00194 ycf39 Ycf39; Provisio 95.6 0.074 1.6E-06 47.8 8.9 71 197-274 2-74 (317)
316 PRK08762 molybdopterin biosynt 95.6 0.073 1.6E-06 49.2 9.0 35 194-228 134-168 (376)
317 TIGR03206 benzo_BadH 2-hydroxy 95.6 0.08 1.7E-06 45.3 8.8 79 194-273 2-89 (250)
318 PRK06124 gluconate 5-dehydroge 95.6 0.088 1.9E-06 45.4 9.0 79 194-274 10-98 (256)
319 PRK06484 short chain dehydroge 95.6 0.065 1.4E-06 51.5 8.9 80 193-274 267-353 (520)
320 PRK07832 short chain dehydroge 95.6 0.075 1.6E-06 46.5 8.6 76 197-274 2-88 (272)
321 PRK07666 fabG 3-ketoacyl-(acyl 95.6 0.082 1.8E-06 45.1 8.7 79 195-274 7-94 (239)
322 PF02558 ApbA: Ketopantoate re 95.6 0.0084 1.8E-07 47.7 2.3 85 198-287 1-89 (151)
323 PRK08690 enoyl-(acyl carrier p 95.5 0.091 2E-06 45.8 9.0 79 194-274 5-94 (261)
324 PRK06484 short chain dehydroge 95.5 0.078 1.7E-06 51.0 9.3 79 194-274 4-89 (520)
325 TIGR02354 thiF_fam2 thiamine b 95.5 0.05 1.1E-06 45.7 7.0 34 195-228 21-54 (200)
326 PRK08415 enoyl-(acyl carrier p 95.5 0.11 2.3E-06 45.8 9.4 79 194-274 4-93 (274)
327 TIGR00507 aroE shikimate 5-deh 95.5 0.1 2.2E-06 45.9 9.2 42 193-235 115-156 (270)
328 PRK08303 short chain dehydroge 95.5 0.088 1.9E-06 47.2 8.9 78 194-273 7-105 (305)
329 PRK06935 2-deoxy-D-gluconate 3 95.5 0.086 1.9E-06 45.6 8.7 79 194-274 14-101 (258)
330 KOG1205 Predicted dehydrogenas 95.5 0.074 1.6E-06 47.0 8.1 79 194-274 11-101 (282)
331 PRK07791 short chain dehydroge 95.5 0.1 2.2E-06 46.2 9.2 80 193-274 4-102 (286)
332 PRK07984 enoyl-(acyl carrier p 95.5 0.095 2.1E-06 45.8 8.9 79 194-274 5-94 (262)
333 PRK06719 precorrin-2 dehydroge 95.5 0.16 3.4E-06 41.0 9.5 80 194-286 12-91 (157)
334 PRK06603 enoyl-(acyl carrier p 95.5 0.1 2.2E-06 45.4 9.1 79 194-274 7-96 (260)
335 PRK03562 glutathione-regulated 95.5 0.13 2.7E-06 50.9 10.5 87 195-286 400-486 (621)
336 TIGR00080 pimt protein-L-isoas 95.5 0.032 6.9E-07 47.3 5.6 98 186-290 69-171 (215)
337 cd01487 E1_ThiF_like E1_ThiF_l 95.5 0.1 2.3E-06 42.7 8.5 33 197-229 1-33 (174)
338 PRK08263 short chain dehydroge 95.4 0.1 2.2E-06 45.7 9.0 79 195-274 3-87 (275)
339 PF03446 NAD_binding_2: NAD bi 95.4 0.22 4.8E-06 40.2 10.3 43 197-240 3-45 (163)
340 COG0569 TrkA K+ transport syst 95.4 0.16 3.5E-06 43.4 9.9 75 197-276 2-78 (225)
341 cd01492 Aos1_SUMO Ubiquitin ac 95.4 0.14 2.9E-06 43.0 9.2 34 195-228 21-54 (197)
342 PRK07097 gluconate 5-dehydroge 95.4 0.11 2.4E-06 45.2 9.1 79 194-274 9-97 (265)
343 PRK07806 short chain dehydroge 95.4 0.11 2.4E-06 44.4 9.0 79 194-274 5-94 (248)
344 PLN00203 glutamyl-tRNA reducta 95.4 0.079 1.7E-06 51.0 8.6 74 195-275 266-340 (519)
345 PRK00811 spermidine synthase; 95.4 0.091 2E-06 46.6 8.5 93 193-289 75-185 (283)
346 PRK08328 hypothetical protein; 95.4 0.096 2.1E-06 45.0 8.4 34 195-228 27-60 (231)
347 KOG1201 Hydroxysteroid 17-beta 95.3 0.092 2E-06 46.4 8.1 78 194-274 37-124 (300)
348 PRK10669 putative cation:proto 95.3 0.15 3.2E-06 49.8 10.4 76 196-276 418-493 (558)
349 PRK06113 7-alpha-hydroxysteroi 95.3 0.11 2.5E-06 44.8 8.8 79 194-274 10-98 (255)
350 PRK06128 oxidoreductase; Provi 95.3 0.099 2.1E-06 46.5 8.6 79 194-274 54-144 (300)
351 PRK07502 cyclohexadienyl dehyd 95.3 0.16 3.5E-06 45.5 9.9 71 196-276 7-78 (307)
352 TIGR02632 RhaD_aldol-ADH rhamn 95.3 0.12 2.5E-06 51.7 9.8 79 194-274 413-503 (676)
353 PLN02366 spermidine synthase 95.3 0.12 2.5E-06 46.5 8.9 96 193-289 90-200 (308)
354 PRK06523 short chain dehydroge 95.3 0.078 1.7E-06 45.8 7.7 73 194-273 8-86 (260)
355 PRK06101 short chain dehydroge 95.3 0.18 4E-06 43.1 9.9 75 196-273 2-80 (240)
356 TIGR01470 cysG_Nterm siroheme 95.2 0.32 7E-06 41.0 11.0 80 194-283 8-88 (205)
357 PRK12367 short chain dehydroge 95.2 0.13 2.8E-06 44.5 8.8 75 194-274 13-89 (245)
358 TIGR03215 ac_ald_DH_ac acetald 95.2 0.22 4.8E-06 44.2 10.3 82 197-288 3-88 (285)
359 PF13602 ADH_zinc_N_2: Zinc-bi 95.2 0.0027 5.9E-08 48.8 -1.6 42 238-288 1-44 (127)
360 TIGR03840 TMPT_Se_Te thiopurin 95.2 0.15 3.3E-06 43.2 8.9 94 192-288 32-145 (213)
361 COG1179 Dinucleotide-utilizing 95.2 0.047 1E-06 46.7 5.6 36 194-229 29-64 (263)
362 PRK05597 molybdopterin biosynt 95.2 0.23 5E-06 45.6 10.6 35 195-229 28-62 (355)
363 PRK05600 thiamine biosynthesis 95.2 0.16 3.6E-06 46.8 9.7 35 194-228 40-74 (370)
364 PLN02657 3,8-divinyl protochlo 95.2 0.14 3.1E-06 47.5 9.4 80 192-274 57-146 (390)
365 PRK03659 glutathione-regulated 95.1 0.17 3.7E-06 49.8 10.3 86 196-286 401-486 (601)
366 PRK07102 short chain dehydroge 95.1 0.19 4.2E-06 42.9 9.6 77 196-274 2-86 (243)
367 PRK11207 tellurite resistance 95.1 0.056 1.2E-06 45.2 6.0 91 188-288 24-127 (197)
368 PF02670 DXP_reductoisom: 1-de 95.1 0.14 3E-06 39.8 7.6 90 198-288 1-114 (129)
369 PRK08159 enoyl-(acyl carrier p 95.1 0.17 3.8E-06 44.3 9.4 81 193-274 8-98 (272)
370 TIGR01963 PHB_DH 3-hydroxybuty 95.1 0.14 3E-06 43.9 8.6 77 196-274 2-88 (255)
371 PRK07370 enoyl-(acyl carrier p 95.1 0.12 2.5E-06 45.0 8.1 79 194-274 5-97 (258)
372 PRK08278 short chain dehydroge 95.0 0.13 2.9E-06 45.0 8.4 79 194-274 5-100 (273)
373 PRK08618 ornithine cyclodeamin 95.0 0.19 4.2E-06 45.5 9.5 84 193-288 125-214 (325)
374 PRK06171 sorbitol-6-phosphate 95.0 0.088 1.9E-06 45.7 7.1 76 194-274 8-87 (266)
375 PRK06940 short chain dehydroge 95.0 0.19 4.1E-06 44.1 9.2 77 195-274 2-86 (275)
376 PRK08063 enoyl-(acyl carrier p 95.0 0.14 3.1E-06 43.8 8.4 80 194-274 3-92 (250)
377 PRK12938 acetyacetyl-CoA reduc 94.9 0.11 2.4E-06 44.4 7.6 79 194-274 2-91 (246)
378 PF01408 GFO_IDH_MocA: Oxidore 94.9 0.16 3.4E-06 38.4 7.5 81 197-288 2-86 (120)
379 PRK08416 7-alpha-hydroxysteroi 94.9 0.19 4.2E-06 43.5 9.0 78 194-273 7-96 (260)
380 COG0421 SpeE Spermidine syntha 94.9 0.19 4.1E-06 44.5 8.8 92 196-289 78-184 (282)
381 PRK05855 short chain dehydroge 94.9 0.14 2.9E-06 49.7 8.8 79 194-274 314-402 (582)
382 PRK01438 murD UDP-N-acetylmura 94.8 0.23 5.1E-06 47.3 10.2 70 194-275 15-89 (480)
383 PRK06718 precorrin-2 dehydroge 94.8 0.49 1.1E-05 39.8 11.0 80 194-285 9-90 (202)
384 PRK08317 hypothetical protein; 94.8 0.29 6.4E-06 41.4 9.9 96 186-289 11-118 (241)
385 PRK06997 enoyl-(acyl carrier p 94.8 0.19 4.1E-06 43.7 8.8 79 194-274 5-94 (260)
386 COG2519 GCD14 tRNA(1-methylade 94.8 0.24 5.2E-06 42.8 9.0 96 186-288 86-188 (256)
387 PRK05650 short chain dehydroge 94.8 0.17 3.7E-06 44.1 8.5 77 197-274 2-87 (270)
388 PRK06701 short chain dehydroge 94.8 0.17 3.7E-06 44.9 8.6 81 193-274 44-134 (290)
389 PRK07424 bifunctional sterol d 94.8 0.19 4.2E-06 46.9 9.2 74 194-274 177-255 (406)
390 PRK05565 fabG 3-ketoacyl-(acyl 94.8 0.19 4.1E-06 42.8 8.7 79 195-274 5-93 (247)
391 TIGR02415 23BDH acetoin reduct 94.8 0.18 3.9E-06 43.3 8.5 78 196-274 1-87 (254)
392 PF03807 F420_oxidored: NADP o 94.8 0.72 1.6E-05 33.3 10.5 76 197-285 1-81 (96)
393 PRK09135 pteridine reductase; 94.7 0.22 4.8E-06 42.5 8.9 79 194-274 5-95 (249)
394 PRK08945 putative oxoacyl-(acy 94.7 0.25 5.4E-06 42.3 9.2 82 192-274 9-102 (247)
395 PRK01683 trans-aconitate 2-met 94.7 0.28 6.1E-06 42.6 9.5 94 187-289 24-124 (258)
396 PLN02520 bifunctional 3-dehydr 94.7 0.13 2.9E-06 49.8 8.0 41 194-235 378-418 (529)
397 PRK09496 trkA potassium transp 94.7 0.35 7.6E-06 45.6 10.9 79 194-276 230-309 (453)
398 PRK08594 enoyl-(acyl carrier p 94.7 0.19 4.2E-06 43.6 8.5 78 194-273 6-96 (257)
399 PRK04457 spermidine synthase; 94.7 0.3 6.5E-06 42.8 9.6 93 193-289 65-171 (262)
400 PRK07402 precorrin-6B methylas 94.7 0.48 1E-05 39.4 10.5 97 187-288 33-135 (196)
401 PRK12937 short chain dehydroge 94.7 0.23 4.9E-06 42.3 8.8 80 194-274 4-93 (245)
402 PRK07066 3-hydroxybutyryl-CoA 94.6 0.2 4.3E-06 45.3 8.6 39 196-235 8-46 (321)
403 PLN00141 Tic62-NAD(P)-related 94.6 0.22 4.8E-06 43.0 8.7 75 195-274 17-95 (251)
404 PRK12743 oxidoreductase; Provi 94.6 0.22 4.8E-06 43.0 8.7 78 195-274 2-90 (256)
405 TIGR02622 CDP_4_6_dhtase CDP-g 94.6 0.098 2.1E-06 47.6 6.7 77 194-274 3-85 (349)
406 PRK07889 enoyl-(acyl carrier p 94.6 0.26 5.7E-06 42.7 9.1 79 194-274 6-95 (256)
407 PRK08300 acetaldehyde dehydrog 94.6 0.32 7E-06 43.4 9.7 86 196-288 5-94 (302)
408 PF13241 NAD_binding_7: Putati 94.6 0.057 1.2E-06 40.2 4.2 77 194-286 6-82 (103)
409 PRK05557 fabG 3-ketoacyl-(acyl 94.6 0.25 5.4E-06 42.0 8.8 79 194-274 4-93 (248)
410 PRK06849 hypothetical protein; 94.5 0.27 5.9E-06 45.6 9.6 79 194-274 3-86 (389)
411 PRK07775 short chain dehydroge 94.5 0.26 5.7E-06 43.1 9.0 78 195-274 10-97 (274)
412 COG0686 Ald Alanine dehydrogen 94.5 0.082 1.8E-06 46.9 5.5 86 196-288 169-261 (371)
413 PF05368 NmrA: NmrA-like famil 94.5 0.35 7.7E-06 41.1 9.6 70 198-273 1-73 (233)
414 PRK14175 bifunctional 5,10-met 94.5 0.23 4.9E-06 44.0 8.4 70 175-248 138-210 (286)
415 TIGR01289 LPOR light-dependent 94.5 0.27 5.9E-06 44.1 9.1 78 195-274 3-91 (314)
416 TIGR01829 AcAcCoA_reduct aceto 94.4 0.27 5.9E-06 41.7 8.7 77 196-274 1-88 (242)
417 PLN02476 O-methyltransferase 94.4 0.32 6.8E-06 43.0 9.2 100 187-289 111-222 (278)
418 PLN02781 Probable caffeoyl-CoA 94.4 0.27 5.8E-06 42.4 8.5 99 188-289 62-172 (234)
419 PRK12745 3-ketoacyl-(acyl-carr 94.4 0.26 5.6E-06 42.4 8.6 78 196-274 3-90 (256)
420 PRK08223 hypothetical protein; 94.4 0.22 4.8E-06 44.1 8.0 35 195-229 27-61 (287)
421 PRK01581 speE spermidine synth 94.3 0.57 1.2E-05 42.9 10.8 95 193-289 149-262 (374)
422 PRK08219 short chain dehydroge 94.3 0.46 1E-05 39.8 9.9 75 196-274 4-81 (227)
423 COG0031 CysK Cysteine synthase 94.3 1 2.2E-05 40.1 12.0 61 187-247 54-116 (300)
424 PF00899 ThiF: ThiF family; I 94.3 0.26 5.6E-06 38.4 7.6 35 195-229 2-36 (135)
425 PLN02823 spermine synthase 94.3 0.33 7.1E-06 44.2 9.2 94 194-289 103-214 (336)
426 PRK08220 2,3-dihydroxybenzoate 94.3 0.21 4.5E-06 42.8 7.7 74 194-274 7-86 (252)
427 PRK07792 fabG 3-ketoacyl-(acyl 94.2 0.35 7.5E-06 43.2 9.3 79 194-274 11-99 (306)
428 PRK07985 oxidoreductase; Provi 94.2 0.26 5.6E-06 43.8 8.4 79 194-274 48-138 (294)
429 TIGR00715 precor6x_red precorr 94.2 0.16 3.6E-06 44.3 6.9 73 197-274 2-75 (256)
430 PRK06522 2-dehydropantoate 2-r 94.2 0.4 8.7E-06 42.6 9.6 84 197-287 2-88 (304)
431 PRK12825 fabG 3-ketoacyl-(acyl 94.2 0.33 7.1E-06 41.2 8.7 78 195-273 6-93 (249)
432 PRK13303 L-aspartate dehydroge 94.2 0.33 7.1E-06 42.6 8.8 81 197-288 3-85 (265)
433 PRK05447 1-deoxy-D-xylulose 5- 94.2 0.54 1.2E-05 43.4 10.3 92 196-288 2-115 (385)
434 PRK08936 glucose-1-dehydrogena 94.2 0.34 7.4E-06 41.9 8.9 79 194-274 6-95 (261)
435 PRK06947 glucose-1-dehydrogena 94.1 0.28 6E-06 42.0 8.2 77 196-274 3-90 (248)
436 PRK07417 arogenate dehydrogena 94.1 0.31 6.7E-06 43.1 8.6 43 197-240 2-44 (279)
437 PRK06153 hypothetical protein; 94.1 0.58 1.2E-05 43.2 10.3 35 194-228 175-209 (393)
438 PRK12824 acetoacetyl-CoA reduc 94.1 0.34 7.3E-06 41.2 8.6 78 196-274 3-90 (245)
439 TIGR01505 tartro_sem_red 2-hyd 94.1 0.4 8.6E-06 42.6 9.3 43 197-240 1-43 (291)
440 PRK09134 short chain dehydroge 94.0 0.36 7.8E-06 41.7 8.8 79 194-274 8-97 (258)
441 PRK09496 trkA potassium transp 94.0 0.51 1.1E-05 44.5 10.5 75 197-276 2-77 (453)
442 cd01485 E1-1_like Ubiquitin ac 94.0 0.68 1.5E-05 38.7 10.0 34 195-228 19-52 (198)
443 PRK06035 3-hydroxyacyl-CoA deh 93.9 0.27 5.8E-06 43.7 7.9 39 196-235 4-42 (291)
444 PRK07819 3-hydroxybutyryl-CoA 93.9 0.15 3.2E-06 45.3 6.2 39 196-235 6-44 (286)
445 PRK13656 trans-2-enoyl-CoA red 93.9 0.33 7.2E-06 44.9 8.4 81 193-275 39-142 (398)
446 PRK12935 acetoacetyl-CoA reduc 93.9 0.41 9E-06 40.9 8.8 80 194-274 5-94 (247)
447 TIGR00477 tehB tellurite resis 93.9 0.22 4.7E-06 41.6 6.8 92 187-288 23-126 (195)
448 PLN02986 cinnamyl-alcohol dehy 93.9 0.41 9E-06 42.8 9.1 37 194-231 4-41 (322)
449 PRK13984 putative oxidoreducta 93.9 0.36 7.7E-06 47.6 9.3 77 192-274 280-378 (604)
450 PRK08642 fabG 3-ketoacyl-(acyl 93.8 0.4 8.7E-06 41.0 8.6 78 195-274 5-91 (253)
451 KOG4022 Dihydropteridine reduc 93.8 0.34 7.4E-06 39.0 7.3 74 195-274 3-82 (236)
452 PRK09260 3-hydroxybutyryl-CoA 93.8 0.33 7.2E-06 43.1 8.2 40 196-236 2-41 (288)
453 PRK07201 short chain dehydroge 93.8 0.3 6.5E-06 48.4 8.7 78 195-274 371-458 (657)
454 PRK06077 fabG 3-ketoacyl-(acyl 93.7 0.44 9.6E-06 40.7 8.7 78 195-274 6-94 (252)
455 PRK09730 putative NAD(P)-bindi 93.7 0.41 8.9E-06 40.8 8.5 77 196-274 2-89 (247)
456 PLN02989 cinnamyl-alcohol dehy 93.7 0.4 8.6E-06 43.0 8.7 39 193-232 3-42 (325)
457 PRK13255 thiopurine S-methyltr 93.6 0.48 1E-05 40.4 8.5 96 191-289 34-149 (218)
458 TIGR00417 speE spermidine synt 93.6 0.53 1.1E-05 41.4 9.0 94 194-289 72-180 (270)
459 PRK14192 bifunctional 5,10-met 93.6 0.38 8.2E-06 42.7 8.1 54 193-248 157-211 (283)
460 PRK14106 murD UDP-N-acetylmura 93.6 0.44 9.5E-06 45.0 9.1 71 194-275 4-79 (450)
461 PRK02472 murD UDP-N-acetylmura 93.5 0.46 1E-05 44.8 9.2 71 194-274 4-78 (447)
462 PRK12746 short chain dehydroge 93.5 0.48 1E-05 40.7 8.6 78 195-274 6-100 (254)
463 PRK12814 putative NADPH-depend 93.5 0.42 9.1E-06 47.6 9.1 77 193-275 191-289 (652)
464 COG2084 MmsB 3-hydroxyisobutyr 93.5 0.69 1.5E-05 41.0 9.5 44 197-241 2-46 (286)
465 PRK14103 trans-aconitate 2-met 93.5 0.86 1.9E-05 39.5 10.1 91 186-288 21-119 (255)
466 PRK12747 short chain dehydroge 93.4 0.68 1.5E-05 39.7 9.4 38 194-232 3-42 (252)
467 PRK07041 short chain dehydroge 93.4 0.49 1.1E-05 39.9 8.4 73 199-274 1-79 (230)
468 PF08659 KR: KR domain; Inter 93.4 0.45 9.7E-06 39.1 7.8 78 197-274 2-91 (181)
469 PRK07574 formate dehydrogenase 93.4 0.59 1.3E-05 43.4 9.2 45 194-239 191-235 (385)
470 PRK05708 2-dehydropantoate 2-r 93.4 0.36 7.8E-06 43.3 7.7 87 197-287 4-92 (305)
471 KOG1199 Short-chain alcohol de 93.4 0.48 1.1E-05 38.6 7.5 80 194-274 8-93 (260)
472 COG1893 ApbA Ketopantoate redu 93.3 0.38 8.3E-06 43.2 7.8 88 197-287 2-89 (307)
473 cd05211 NAD_bind_Glu_Leu_Phe_V 93.3 0.33 7.2E-06 41.3 7.1 46 194-239 22-77 (217)
474 PLN03013 cysteine synthase 93.3 1.4 3.1E-05 41.4 11.7 57 188-244 167-226 (429)
475 PLN02819 lysine-ketoglutarate 93.3 1 2.2E-05 47.0 11.6 89 194-288 568-672 (1042)
476 PLN02735 carbamoyl-phosphate s 93.3 0.44 9.6E-06 50.2 9.2 99 178-282 6-116 (1102)
477 PRK13304 L-aspartate dehydroge 93.3 0.98 2.1E-05 39.6 10.1 79 197-287 3-84 (265)
478 PLN03139 formate dehydrogenase 93.2 0.61 1.3E-05 43.2 9.2 46 194-240 198-243 (386)
479 TIGR03466 HpnA hopanoid-associ 93.2 0.2 4.3E-06 44.7 6.0 71 197-273 2-73 (328)
480 PLN02686 cinnamoyl-CoA reducta 93.2 0.6 1.3E-05 42.9 9.2 42 193-235 51-93 (367)
481 COG0287 TyrA Prephenate dehydr 93.2 0.6 1.3E-05 41.3 8.7 45 196-240 4-49 (279)
482 PRK09310 aroDE bifunctional 3- 93.2 0.51 1.1E-05 45.1 8.8 41 194-235 331-371 (477)
483 PRK06123 short chain dehydroge 93.1 0.63 1.4E-05 39.7 8.6 78 195-274 2-90 (248)
484 PRK13403 ketol-acid reductoiso 93.1 0.92 2E-05 40.9 9.7 71 193-277 14-84 (335)
485 PLN02427 UDP-apiose/xylose syn 93.1 0.55 1.2E-05 43.3 8.8 77 192-273 11-95 (386)
486 COG2910 Putative NADH-flavin r 93.1 0.22 4.7E-06 41.0 5.2 71 197-275 2-73 (211)
487 PRK14806 bifunctional cyclohex 93.1 0.61 1.3E-05 47.1 9.7 80 196-286 4-84 (735)
488 PF10727 Rossmann-like: Rossma 93.1 0.33 7.1E-06 37.6 6.1 78 196-287 11-90 (127)
489 KOG1207 Diacetyl reductase/L-x 93.1 0.41 9E-06 39.1 6.7 79 194-274 6-87 (245)
490 PRK07411 hypothetical protein; 93.0 0.69 1.5E-05 43.0 9.3 35 195-229 38-72 (390)
491 PRK11559 garR tartronate semia 93.0 0.89 1.9E-05 40.4 9.7 43 197-240 4-46 (296)
492 PRK04266 fibrillarin; Provisio 93.0 1.2 2.7E-05 38.1 10.2 97 188-290 66-170 (226)
493 PF01596 Methyltransf_3: O-met 93.0 0.17 3.7E-06 42.7 4.7 97 190-289 41-149 (205)
494 PRK12921 2-dehydropantoate 2-r 93.0 0.37 8E-06 42.9 7.2 86 197-286 2-89 (305)
495 PRK12859 3-ketoacyl-(acyl-carr 93.0 0.69 1.5E-05 39.9 8.7 79 194-274 5-106 (256)
496 PF08704 GCD14: tRNA methyltra 92.9 0.22 4.8E-06 43.2 5.5 99 186-288 32-139 (247)
497 PRK05599 hypothetical protein; 92.9 0.68 1.5E-05 39.8 8.6 75 197-274 2-87 (246)
498 PRK08293 3-hydroxybutyryl-CoA 92.9 0.53 1.1E-05 41.7 8.0 40 196-236 4-43 (287)
499 PRK14618 NAD(P)H-dependent gly 92.9 0.7 1.5E-05 41.7 9.0 85 196-287 5-96 (328)
500 TIGR03589 PseB UDP-N-acetylglu 92.9 0.45 9.8E-06 42.9 7.7 77 194-274 3-84 (324)
No 1
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.2e-56 Score=379.11 Aligned_cols=284 Identities=77% Similarity=1.284 Sum_probs=274.8
Q ss_pred CcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 022865 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.+++++||++.+++++||.++|++.++|+.+||+||++++++||+|...|+|..+...+|.++|||.+|+|+++|+.|++
T Consensus 3 gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~ 82 (375)
T KOG0022|consen 3 GKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTT 82 (375)
T ss_pred CCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccc
Confidence 46789999999999999999999999999999999999999999999999999877789999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
+++||+|+.....+|++|.+|.+++.|+|.......+.+.+.+||.+|+.-+|+.+|+|+++.+|+||.+++...+++|+
T Consensus 83 vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId 162 (375)
T KOG0022|consen 83 VKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID 162 (375)
T ss_pred cCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence 99999999999999999999999999999999999888999889999999999999999999999999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
+..+++.++++.|..+|+|.|....++++||+++.|+|.|.+|+++++-||+.|+++||++|-+++|.+.+++||+++.+
T Consensus 163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~i 242 (375)
T KOG0022|consen 163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFI 242 (375)
T ss_pred CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
|.++....+++.+.+.|++|+|+-|||+|+.+++.+++.+.+.+
T Consensus 243 Np~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~G 286 (375)
T KOG0022|consen 243 NPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKG 286 (375)
T ss_pred ChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcC
Confidence 99865557999999999999999999999999999999998876
No 2
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=1.6e-55 Score=382.52 Aligned_cols=280 Identities=63% Similarity=1.091 Sum_probs=269.1
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
+++||++.+++++||+++|++++.|++||||||+.++|+||+|..+++|..+.. +|.++|||++|+|+++|+.|+.++|
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 578999999999999999999999999999999999999999999999998887 9999999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+..+...|+.|.+|.++++++|.......+.|.+ .||.+|++.++.+++++++.++|++|..++...+++++++.
T Consensus 80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 99999999999999999999999999998888888866 99999999999999999999999999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
+++.++++.|...|.+.+..+.+++++|+++.|+|.|++|++++|-|+..|+.+|+++|.+++|++++++||+++++|.+
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~ 238 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
+.. +..+.+.+++++|+|.+|||+|+...++++++++.++ |+
T Consensus 239 ~~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~-G~ 280 (366)
T COG1062 239 EVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRG-GT 280 (366)
T ss_pred hhh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcC-Ce
Confidence 632 6889999999999999999999999999999999997 53
No 3
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.8e-55 Score=389.33 Aligned_cols=253 Identities=36% Similarity=0.539 Sum_probs=235.4
Q ss_pred ccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 7 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
+++|||+++.+++++++++|++.|.|+++||||+|+++|+||+|++.++|.++...+|+++|||.+|+|+++|+.|+.|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 46899999999999999999999999999999999999999999999999999989999999999999999999999999
Q ss_pred CCCEEee-cCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCC
Q 022865 87 PGDHVIP-CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (291)
Q Consensus 87 ~Gd~V~~-~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 165 (291)
+||||.+ +...+|+.|.+|++|+.++|++... .|++ .+| +|+||+.++.+++++||+
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~-~~G------------------Gyaeyv~v~~~~~~~iP~ 138 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYT-TDG------------------GYAEYVVVPARYVVKIPE 138 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccc---ccee-ecC------------------cceeEEEEchHHeEECCC
Confidence 9999988 8889999999999999999999665 5555 444 999999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
++|++.||.+.|+..|.|+++ +...++||++|+|.|.|++|++++|+|+++|+ +|++++++++|+++++++|++++++
T Consensus 139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~ 216 (339)
T COG1064 139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN 216 (339)
T ss_pred CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence 999999999999999999987 45999999999999999999999999999997 9999999999999999999999999
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
..+ ++..+.+.+. +|+++|+++ +.+++.++++|+++ |+
T Consensus 217 ~~~--~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~ 254 (339)
T COG1064 217 SSD--SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GT 254 (339)
T ss_pred cCC--chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CE
Confidence 763 5555666553 999999999 89999999999999 53
No 4
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-48 Score=335.27 Aligned_cols=270 Identities=30% Similarity=0.455 Sum_probs=237.9
Q ss_pred CCCCCcccceeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEe
Q 022865 1 MSTEGQVITCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESV 78 (291)
Q Consensus 1 m~~~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~ 78 (291)
|+++..|.+++++.+..++. ++++.+++.|+|+++||+|++++|||||+|++.|.+.++..++|.++|||.+|+|+++
T Consensus 1 ~~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvkv 80 (360)
T KOG0023|consen 1 MSSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKV 80 (360)
T ss_pred CCcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEE
Confidence 67778899999999999988 5677999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCEEe-ecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc
Q 022865 79 GEGVTEVQPGDHVI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (291)
Q Consensus 79 G~~~~~~~~Gd~V~-~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 157 (291)
|++|+.|++||+|- .+....|.+|.+|.++..+.|++.... .+|...++..++|+|++|++++.
T Consensus 81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t---------------~~g~~~DGt~~~ggf~~~~~v~~ 145 (360)
T KOG0023|consen 81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFT---------------YNGVYHDGTITQGGFQEYAVVDE 145 (360)
T ss_pred CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEe---------------ccccccCCCCccCccceeEEEee
Confidence 99999999999994 445578999999999999999954332 12222333777889999999999
Q ss_pred cceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHH
Q 022865 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAK 236 (291)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~-~~~~~~~ 236 (291)
.++++||++++++.||.++|+..|+|.+| ....+.||+++.|.|+|++|.+++|+||+||. +|+++++++ +|.+..+
T Consensus 146 ~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~ 223 (360)
T KOG0023|consen 146 VFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIK 223 (360)
T ss_pred eeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHH
Confidence 99999999999999999999999999987 66778899999999997799999999999999 999999998 5666667
Q ss_pred hcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 237 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 237 ~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
.+||+.+++... ++++.+.+.+.+++++|-|.+. .+..+..++.+|+.+ |+
T Consensus 224 ~LGAd~fv~~~~-d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt 274 (360)
T KOG0023|consen 224 SLGADVFVDSTE-DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GT 274 (360)
T ss_pred hcCcceeEEecC-CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CE
Confidence 799999888763 3788889999888888888877 556699999999998 53
No 5
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.7e-48 Score=333.24 Aligned_cols=258 Identities=28% Similarity=0.414 Sum_probs=231.4
Q ss_pred cceeEEEEecCCCCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCCC---CCCCcccccceeEEEEEeCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVT 83 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~Vv~~G~~~~ 83 (291)
..++|+++.++++ +++++.|.|++ .|+||+|+++++|||++|+++|...... .+.|.++|||.+|+|+++|+.|+
T Consensus 3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 3689999999987 99999999986 9999999999999999999999766532 26899999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc
Q 022865 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (291)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 163 (291)
++++||||++.+..+|..|.+|++|+.|+|++..+ .+....+| ++++|++.++++++++
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f---~atpp~~G------------------~la~y~~~~~dfc~KL 140 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVF---CATPPVDG------------------TLAEYYVHPADFCYKL 140 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCcccc---ccCCCcCC------------------ceEEEEEechHheeeC
Confidence 99999999999999999999999999999999877 33444556 9999999999999999
Q ss_pred CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
|+++|++++|++. +++++|+|. +++.+++|++|||+|+|++|+++...||++|+++|+.++..+.|++++++||++.+
T Consensus 141 Pd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~ 218 (354)
T KOG0024|consen 141 PDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVT 218 (354)
T ss_pred CCCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEE
Confidence 9999999999887 799999976 88999999999999999999999999999999999999999999999999999888
Q ss_pred eCCCCCC--chHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 244 VNPKDHD--KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 244 i~~~~~~--~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.+..... +.+.+.+....+. .+|++|||+|...+++.++.+++.+|
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gG 267 (354)
T KOG0024|consen 219 DPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGG 267 (354)
T ss_pred eeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCC
Confidence 7665433 3444555555554 69999999999999999999999983
No 6
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=7.4e-46 Score=340.57 Aligned_cols=281 Identities=67% Similarity=1.145 Sum_probs=239.9
Q ss_pred ceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
.|||+++...+++++++++|.|.|.++||+|||+++++|++|++++.|..+...+|.++|||++|+|+++|+.+++|++|
T Consensus 1 ~~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~G 80 (368)
T TIGR02818 1 KSRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVG 80 (368)
T ss_pred CceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCC
Confidence 38999999988889999999999999999999999999999999998876555679999999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|++.+..+|+.|.+|..++.++|.+.......|+. .+|..++..+|...+++.+.|+|+||+.++.+.++++|++++
T Consensus 81 drV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~ 159 (368)
T TIGR02818 81 DHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAP 159 (368)
T ss_pred CEEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCC
Confidence 9999988899999999999999999986543333332 222222222232222222357999999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
+++++.+++++.|+|+++....+++++++|||+|+|++|++++|+||++|+.+|++++.+++|+++++++|++.++++.+
T Consensus 160 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~ 239 (368)
T TIGR02818 160 LEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND 239 (368)
T ss_pred HHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc
Confidence 99999999999999998877888999999999999999999999999999977999999999999999999999998764
Q ss_pred CCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 249 ~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
...++.+.+.+++++++|++|||+|++..+..+++++++++|
T Consensus 240 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G 281 (368)
T TIGR02818 240 YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWG 281 (368)
T ss_pred cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCC
Confidence 334566777777766899999999998889999999988634
No 7
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=5.3e-45 Score=334.92 Aligned_cols=282 Identities=79% Similarity=1.286 Sum_probs=242.4
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
++|||+++...+++++++++|.|.|+++||+||++++++|++|+.++.+..+...+|.++|||++|+|+++|+.+++|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~v 80 (368)
T cd08300 1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKP 80 (368)
T ss_pred CcceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCC
Confidence 36899999988888999999999999999999999999999999999887655568999999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|++.+..+|+.|.+|+.++.+.|.+.......|.. .+|..++..+|.+.+++...|+|+||+.++.+.++++|+++
T Consensus 81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 159 (368)
T cd08300 81 GDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEA 159 (368)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCC
Confidence 99999988899999999999999999876432222222 22222233334444444456799999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++++.+++++.|+|+++.+..+++++++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|++++++++
T Consensus 160 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~ 239 (368)
T cd08300 160 PLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPK 239 (368)
T ss_pred ChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEccc
Confidence 99999999999999999887778899999999999999999999999999997799999999999999999999999877
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
+.++++.+.+.+++++++|+|||++|++..+..+++++++++|
T Consensus 240 ~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G 282 (368)
T cd08300 240 DHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWG 282 (368)
T ss_pred ccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCC
Confidence 5333577778888777899999999998889999999987634
No 8
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=6e-45 Score=336.04 Aligned_cols=285 Identities=59% Similarity=1.089 Sum_probs=238.1
Q ss_pred cccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC-CCCCCcccccceeEEEEEeCCCCCC
Q 022865 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 6 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
++++|||+++.++++++.+++++.|.|+++||+|||+++|||++|++++.|..+ ...+|.++|||++|+|+++|++++.
T Consensus 7 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 86 (381)
T PLN02740 7 KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVED 86 (381)
T ss_pred cceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCc
Confidence 568999999999987799999999999999999999999999999999988753 2357899999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCcccccc--CCCceecccCCcceeeeEEecccceEE
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI--NGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (291)
|++||+|++.+..+|+.|.+|..+..+.|++.....-.+....+|..++.. .+...+.+...|+|+||+.++.+.+++
T Consensus 87 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~ 166 (381)
T PLN02740 87 LKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVK 166 (381)
T ss_pred CCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEE
Confidence 999999999999999999999999999999864311000000011110000 011112223457999999999999999
Q ss_pred cCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 163 iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
+|+++++++++.+.+++.|+|+++.+..+++++++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.
T Consensus 167 iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~ 246 (381)
T PLN02740 167 IDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITD 246 (381)
T ss_pred CCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcE
Confidence 99999999999999999999998777789999999999999999999999999999967999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
++++++...++.+.+.+++++++|+|||++|.+..+..+++++++++|
T Consensus 247 ~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G 294 (381)
T PLN02740 247 FINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWG 294 (381)
T ss_pred EEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCC
Confidence 998765333577778887766899999999998889999999988633
No 9
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1.2e-44 Score=332.58 Aligned_cols=283 Identities=70% Similarity=1.205 Sum_probs=242.8
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
++|||+++...++++++++++.|.|+++||+||+.+++||++|+.++.|..+...+|.++|||++|+|+++|+.+++|++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 47999999998888999999999999999999999999999999999887655567899999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+..+..+|+.|.+|..++.+.|.+.......|....++..++...|...+++...|+|++|+.++...++++|+++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 99999998899999999999999999986543222332222223333334444444556799999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++++++++.+.|+|+++....+++++++|||+|+|++|++++|+|+++|+.+|++++++++++++++++|++.+++++
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~ 240 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence 99999999989999999887778899999999999999999999999999987799999999999999999999998876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
..+.++.+.+++++++++|++||++|....+..+++++++++|
T Consensus 241 ~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g 283 (369)
T cd08301 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWG 283 (369)
T ss_pred ccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCC
Confidence 5334566777777766899999999998889999999998524
No 10
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=2.9e-44 Score=330.40 Aligned_cols=276 Identities=44% Similarity=0.746 Sum_probs=232.8
Q ss_pred eeEEEEecCC--------CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCC
Q 022865 10 CKAAVAWEPN--------KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 10 ~~a~~~~~~~--------~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~ 81 (291)
|||+++.++| +.+++++++.|.|+++||+|||.+++||++|++++.|..+ ..+|.++|||++|+|+++|+.
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 7899999876 3489999999999999999999999999999999988653 357899999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceE
Q 022865 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 161 (291)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 161 (291)
+++|++||+|++.+...|+.|..|+.++.++|.+.......|.. .+|..++..++..+....+.|+|++|+.++.+.++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceE
Confidence 99999999999888889999999999999999876432222221 11111111111111111223699999999999999
Q ss_pred EcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC
Q 022865 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (291)
Q Consensus 162 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~ 241 (291)
++|+++++++++.++++..|+|+++....+++++++|||+|+|++|++++|+|+++|+++|++++.+++|+++++++|++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 238 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT 238 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999999887788899999999999999999999999999997799999999999999999999
Q ss_pred EEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 242 ~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.++++.+ .++.+.+.+++++++|+||||+|....+..++++++++|
T Consensus 239 ~~i~~~~--~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G 284 (371)
T cd08281 239 ATVNAGD--PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGG 284 (371)
T ss_pred eEeCCCc--hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCC
Confidence 9998765 567777888776689999999999888999999999983
No 11
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=2.9e-43 Score=322.19 Aligned_cols=270 Identities=39% Similarity=0.629 Sum_probs=232.4
Q ss_pred ceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
+|||+++.++++++++++++.|.|+++||+|||.++++|++|++++.|..+ ..+|.++|||++|+|+++|+.+++|++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence 599999999998899999999999999999999999999999999888653 2478999999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|++.+..+|+.|.+|..++.++|........ .....+| .........|+|+||+.++.+.++++|++++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~-~~~~~~g--------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~ 150 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQ-KMTLTDG--------TELSPALGIGAFAEKTLVHAGQCTKVDPAAD 150 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCcccccc-ccccccC--------cccccccccccccceEEEehhheEECCCCCC
Confidence 999999999999999999999999986432100 0000001 0000012346999999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
+++++.+++.+.++|+++.+...++++++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++++
T Consensus 151 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 230 (358)
T TIGR03451 151 PAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG 230 (358)
T ss_pred hhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC
Confidence 99999999999999988777788999999999999999999999999999966999999999999999999999998865
Q ss_pred CCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 249 ~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
.++.+.+.+++++ ++|+||||+|++..+..++++++++ |+
T Consensus 231 --~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~ 271 (358)
T TIGR03451 231 --TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GT 271 (358)
T ss_pred --cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CE
Confidence 5677778888876 8999999999988899999999998 53
No 12
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=4.3e-43 Score=323.25 Aligned_cols=279 Identities=55% Similarity=1.035 Sum_probs=231.3
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
..|||+++.++++.+++++++.|.|+++||+|||.+++||++|+..+.+.. .+|.++|||++|+|+++|+.+++|++
T Consensus 11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~ 87 (378)
T PLN02827 11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK 87 (378)
T ss_pred ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence 689999999888779999999999999999999999999999999887642 36789999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|++.+...|+.|.+|+.++.++|++.... ..|....++..++...|...+++...|+|++|+.++.+.++++|+++
T Consensus 88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l 166 (378)
T PLN02827 88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA 166 (378)
T ss_pred CCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence 99999998889999999999999999874221 01111001111111111111111234699999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++++.+.+++.++|+++....+++++++|||+|+|++|++++|+|+++|+..|++++.+++|+++++++|++.+++++
T Consensus 167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~ 246 (378)
T PLN02827 167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPN 246 (378)
T ss_pred CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEccc
Confidence 99999998888889998776778899999999999999999999999999996788998899999999999999999876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
+...++.+.+.+++++++|+|||++|....+..+++++++++|
T Consensus 247 ~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G 289 (378)
T PLN02827 247 DLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWG 289 (378)
T ss_pred ccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCC
Confidence 5334567778877766899999999998789999999998733
No 13
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=6.7e-43 Score=320.63 Aligned_cols=280 Identities=64% Similarity=1.099 Sum_probs=237.4
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
+++||+++.+.+++++++++|.|.|.++||+||++++++|++|++++.|..+ ..+|.++|||++|+|+++|+.++++++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 4789999998888899999999999999999999999999999999988654 457899999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+..+...|+.|.+|..++.++|++.... ..|.. .++..+....|...+.+...|+|++|+.++.+.++++|+++
T Consensus 80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence 99999988899999999999999999986543 12222 22211222222222223345799999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++++.+.+++.|+|+++.+..+++++++|||+|+|++|++++|+|+++|+.+|++++++++++++++++|++.+++.+
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~ 237 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence 99999999999999999877788899999999999999999999999999997799999999999999999999998876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
+....+.+.+.+++++++|+||||+|....+..+++++++++|
T Consensus 238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G 280 (365)
T cd08277 238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWG 280 (365)
T ss_pred cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCC
Confidence 5333456677777767899999999988889999999987534
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=2.1e-42 Score=313.96 Aligned_cols=253 Identities=30% Similarity=0.489 Sum_probs=223.7
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++.+++. +++++++.|.|+++||+||+.++++|++|+..+.+.+.. ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 78999997764 999999999999999999999999999999988776432 2458999999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|+..+...|++|.+|+.++++.|.+... .+|.. .+ |+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~-~~------------------G~~ae~~~v~~~~~~~~P~~~~ 138 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWN-RD------------------GGHAEYMLVPEKTLIPLPDDLS 138 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccC-CC------------------CcceeEEEechHHeEECCCCCC
Confidence 999999999999999999999999987543 12221 22 4999999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
+++++.+++++.|+|+++ ....++++++|||+|+|++|++++|+|+++|+++|++++++++++++++++|++.++++++
T Consensus 139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~ 217 (339)
T cd08239 139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ 217 (339)
T ss_pred HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence 999999999999999986 5677889999999999999999999999999955999999999999999999999998865
Q ss_pred CCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 249 ~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+ .+.+.+++++ ++|+||||+|+...+..++++|+++
T Consensus 218 --~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~ 255 (339)
T cd08239 218 --DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW 255 (339)
T ss_pred --ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC
Confidence 33 5667777766 8999999999988789999999998
No 15
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.3e-41 Score=309.78 Aligned_cols=259 Identities=29% Similarity=0.396 Sum_probs=212.2
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCc-ccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC-ILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~-~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|+++++..++...++++.+.|.+.+++|+|||.++|||++|++++.+..+....|. ++|||++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 57777877766455777877778999999999999999999999999876666666 99999999999999 77789999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEE-cCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK-IDPQA 167 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-iP~~~ 167 (291)
|||++.+..+|+.|.+|+.+..++|++... .|..... ....|+|+||+.+|.++++. +|+++
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~---~g~~~~~--------------~~~~G~~aEyv~vp~~~~~~~~pd~~ 142 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGF---YGYAGLG--------------GGIDGGFAEYVRVPADFNLAKLPDGI 142 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccc---ccccccc--------------CCCCCceEEEEEeccccCeecCCCCC
Confidence 999999999999999999999999996542 1211100 00124999999999755555 47887
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNP 246 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~ 246 (291)
+.+++++..++.++|++........++.+|+|+|+|++|++++++++.+|+++|+++|.+++|++++++ ++++.+++.
T Consensus 143 -~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~ 221 (350)
T COG1063 143 -DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNP 221 (350)
T ss_pred -ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecC
Confidence 455566666999998864555556666699999999999999999999999999999999999999998 556555555
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.. ......+.+.+++ ++|++|||+|....+.+++++++++|
T Consensus 222 ~~--~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG 263 (350)
T COG1063 222 SE--DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGG 263 (350)
T ss_pred cc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCC
Confidence 44 2566677788888 99999999999999999999999993
No 16
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=8e-42 Score=307.67 Aligned_cols=231 Identities=29% Similarity=0.403 Sum_probs=207.6
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCC-CCCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++...+.+ ++++|+|.|.|+++||||||++++||+.|+..++|. .+..++|.++|.|.+|+|+++|+.++.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 688999987765 889999999999999999999999999999999987 33447899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+.... .| ..|+|+||+.++.+.++++|++
T Consensus 81 ~GdrV~~~~~-~~---------------------------------------------~~G~~AEy~~v~a~~~~~~P~~ 114 (326)
T COG0604 81 VGDRVAALGG-VG---------------------------------------------RDGGYAEYVVVPADWLVPLPDG 114 (326)
T ss_pred CCCEEEEccC-CC---------------------------------------------CCCcceeEEEecHHHceeCCCC
Confidence 9999985530 00 1249999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+|+++|+++++++.|||+++....++++|++|||+|+ |++|.+++|+||++|+ +++++.++++|.++++++|++++++
T Consensus 115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~ 193 (326)
T COG0604 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN 193 (326)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence 9999999999999999999989899999999999986 9999999999999998 6777667788888999999999999
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
+++ .++.+.+++++++ ++|+|||++|... +..++++|+++ |+
T Consensus 194 y~~--~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~ 236 (326)
T COG0604 194 YRE--EDFVEQVRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GR 236 (326)
T ss_pred CCc--ccHHHHHHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CE
Confidence 887 5599999999998 9999999999965 88899999999 53
No 17
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2.4e-41 Score=307.86 Aligned_cols=255 Identities=22% Similarity=0.356 Sum_probs=212.1
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhc-CCCC--CCCCCcccccceeEEEEEeCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDP--EGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.++|++++.++++ +++++++.| +.++||||||+++|||++|++++. +... ...+|.++|||++|+|+++ .+++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 5789999998877 999999987 689999999999999999999875 3332 2357999999999999999 6788
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||+|+..+..+|+.|.+|..++.+.|++... +|....+ ....|+|+||+.++.+.++++|
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~--------------~~~~G~~aey~~v~~~~~~~~P 141 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYF--------------PHVDGGFTRYKVVDTAQCIPYP 141 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eeccccc--------------CCCCCceeeeEEechHHeEECC
Confidence 9999999999999999999999999999997543 2211000 0013499999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
++++++.++. ..+++++|+++. .....++++|+|+|+|++|++++|+|+++|+++|++++++++|+++++++|++.++
T Consensus 142 ~~l~~~~aa~-~~~~~~a~~al~-~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi 219 (343)
T PRK09880 142 EKADEKVMAF-AEPLAVAIHAAH-QAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV 219 (343)
T ss_pred CCCCHHHHHh-hcHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEe
Confidence 9999876654 457789999774 45566899999999999999999999999997799999999999999999999999
Q ss_pred CCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++++ .++.+ +.+. .+++|+||||+|.+..+..++++++++|
T Consensus 220 ~~~~--~~~~~-~~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G 260 (343)
T PRK09880 220 NPQN--DDLDH-YKAE-KGYFDVSFEVSGHPSSINTCLEVTRAKG 260 (343)
T ss_pred cCCc--ccHHH-Hhcc-CCCCCEEEECCCCHHHHHHHHHHhhcCC
Confidence 8765 33333 2222 2369999999999888999999999983
No 18
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=3.2e-41 Score=311.95 Aligned_cols=262 Identities=27% Similarity=0.432 Sum_probs=215.0
Q ss_pred ceeEEEEecCCCCeEEEeeecCCCC-------CCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPPQ-------AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~~-------~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~ 81 (291)
-|||+++.++++ ++++++|.|.|+ +|||||||+++|||++|++++.|..+ ..+|.++|||++|+|+++|+.
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD 79 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence 489999998886 999999999874 68999999999999999999987653 357899999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCC---CCceecCCCccccccCCCceecccCCcceeeeEEeccc
Q 022865 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT---GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (291)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~---~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 158 (291)
+++|++||||++.+...|+.|.+|.+++.++|.+..... .+|+... | ...|+|+||+.++..
T Consensus 80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~-~--------------~~~G~~aey~~v~~~ 144 (393)
T TIGR02819 80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM-G--------------GWVGGQSEYVMVPYA 144 (393)
T ss_pred cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccccc-C--------------CCCCceEEEEEechh
Confidence 999999999999999999999999999999999753210 0111000 0 013599999999964
Q ss_pred --ceEEcCCCCCh----hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 022865 159 --SVAKIDPQAPL----DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 232 (291)
Q Consensus 159 --~~~~iP~~~~~----~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~ 232 (291)
.++++|++++. ..++.+.+++.++|+++ ...+++++++|||.|+|++|++++|+|+++|+..|++++.+++|+
T Consensus 145 ~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~ 223 (393)
T TIGR02819 145 DFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARL 223 (393)
T ss_pred hCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 79999998753 34566777889999976 457889999999998999999999999999996677778889999
Q ss_pred HHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCCh--------------HHHHHHHHHhhccCCC
Q 022865 233 DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV--------------SVMRAALECCHKVSGT 291 (291)
Q Consensus 233 ~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~--------------~~~~~~~~~l~~~gg~ 291 (291)
++++++|++. +++.. ..++.+.+.+++++ ++|++||++|.+ .++++++++++++ |+
T Consensus 224 ~~a~~~Ga~~-v~~~~-~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~ 294 (393)
T TIGR02819 224 AQARSFGCET-VDLSK-DATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GA 294 (393)
T ss_pred HHHHHcCCeE-EecCC-cccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CE
Confidence 9999999974 44432 13566677777776 899999999986 4799999999999 53
No 19
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=3.9e-40 Score=303.12 Aligned_cols=282 Identities=60% Similarity=1.003 Sum_probs=238.3
Q ss_pred ccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 7 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
-.+||++++...+++++++++|.|.+.++||+||++++++|++|+..+.|... ..+|.++|||++|+|+++|+.++.|+
T Consensus 5 ~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~ 83 (373)
T cd08299 5 VIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVK 83 (373)
T ss_pred cceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCC
Confidence 46799999999888899999999999999999999999999999999988752 35788999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|++.+..+|+.|.+|..++.+.|++.......|.. .++..++..+|.+.+++...|+|++|+.++.+.++++|++
T Consensus 84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~ 162 (373)
T cd08299 84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAA 162 (373)
T ss_pred CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCC
Confidence 999999988899999999999999999876432112222 3333344444544444445689999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++++++.+++++.++|+++....+++++++|+|+|+|++|++++++|+.+|+.+|+++++++++++.++++|++++++.
T Consensus 163 l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~ 242 (373)
T cd08299 163 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP 242 (373)
T ss_pred CChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence 99999999999999999987788899999999999889999999999999998679999999999999999999998887
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
.+...++.+.+.+++++++|++|||+|.+..+..++..+.+.||
T Consensus 243 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G 286 (373)
T cd08299 243 QDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYG 286 (373)
T ss_pred cccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCC
Confidence 65333466677776666899999999987778888877654324
No 20
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=2e-40 Score=303.62 Aligned_cols=263 Identities=23% Similarity=0.321 Sum_probs=217.9
Q ss_pred CcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 022865 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
+-|++++++.+.+.++.+++.+++.|.|+++||+|||.+++||++|++++.|.++...+|.++|||++|+|+++|+.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 87 (360)
T PLN02586 8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK 87 (360)
T ss_pred hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence 46788888888887777999999999999999999999999999999999876654467899999999999999999999
Q ss_pred CCCCCEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc
Q 022865 85 VQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (291)
Q Consensus 85 ~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 163 (291)
|++||+|++.+. .+|+.|.+|..++.+.|++...... ... .+| ....|+|+||+.++.+.++++
T Consensus 88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~-~~~-~~g-------------~~~~G~~aey~~v~~~~~~~l 152 (360)
T PLN02586 88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYN-SIG-HDG-------------TKNYGGYSDMIVVDQHFVLRF 152 (360)
T ss_pred cCCCCEEEEccccCcCCCCccccCCCcccCCCcccccc-ccc-cCC-------------CcCCCccceEEEEchHHeeeC
Confidence 999999986554 4799999999999999997543100 000 001 001249999999999999999
Q ss_pred CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhcCCCE
Q 022865 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTE 242 (291)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~-~~~~~~~ga~~ 242 (291)
|+++++++++.+.+...|+|+++.....++++++|||.|+|++|++++|+||++|+ +|++++.++++ .++++++|++.
T Consensus 153 P~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~ 231 (360)
T PLN02586 153 PDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADS 231 (360)
T ss_pred CCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcE
Confidence 99999999999999999999987666667899999999999999999999999999 77777666655 55668899998
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+++..+ . +.+.+.++ ++|+|||++|....+..++++++++|
T Consensus 232 vi~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G 272 (360)
T PLN02586 232 FLVSTD--P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNG 272 (360)
T ss_pred EEcCCC--H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCc
Confidence 887654 1 23444444 69999999998878999999999983
No 21
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=3e-39 Score=296.47 Aligned_cols=277 Identities=59% Similarity=1.041 Sum_probs=247.3
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
+||+++.+.++++++++++.|.+.+++|+||+.++++|++|+..+.+... ..+|.++|||++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 57899998887899999999999999999999999999999998887653 34678999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|+..+..+|++|.+|..++.+.|.....+...|.. .+|..++..+|+..+++.+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~ 158 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL 158 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCH
Confidence 999998899999999999999999998876666655 6677777778888888888899999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
++++.+.+++.++|+++.....++++++|||+|+|++|++++++|+.+|+..|++++++++++++++++|++++++..+.
T Consensus 159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~ 238 (365)
T cd05279 159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238 (365)
T ss_pred HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccc
Confidence 99999999999999988788889999999999889999999999999999668888889999999999999998887653
Q ss_pred CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhh-cc
Q 022865 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH-KV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~-~~ 288 (291)
+.++.+.+.+++++++|++||++|....+..++++++ ++
T Consensus 239 ~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~ 278 (365)
T cd05279 239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG 278 (365)
T ss_pred cchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC
Confidence 2266777777775689999999998778999999999 76
No 22
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=3.3e-39 Score=294.48 Aligned_cols=252 Identities=31% Similarity=0.494 Sum_probs=218.6
Q ss_pred EEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC-CCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 022865 13 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV 91 (291)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V 91 (291)
+++.+++++++++++|.|.|+++||+|||.++++|++|++.+.+.. +...+|.++|||++|+|+++|+.+..+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 4667777779999999999999999999999999999999874433 233578999999999999999999877 99999
Q ss_pred eecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCC------
Q 022865 92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP------ 165 (291)
Q Consensus 92 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~------ 165 (291)
++.+..+|+.|.+|..++.++|..... .|.. .+ |+|++|+.++.+.++++|+
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~ae~~~v~~~~~~~ip~~~~~~~ 138 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKM---PGND-MQ------------------GGFASHIVVPAKGLCVVDEARLAAA 138 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCc---cCcC-CC------------------CcccceEEechHHeEECCccccccc
Confidence 999999999999999999999986533 1211 22 4999999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++++.++.+.+++.++|+++. ...++++++|+|+|+|++|++++|+|+++|+ +|++++++++++++++++|++.+++
T Consensus 139 ~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~ 216 (349)
T TIGR03201 139 GLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN 216 (349)
T ss_pred CCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence 8999999988899999999774 5788999999999999999999999999999 8999999999999999999999888
Q ss_pred CCCCC-chHHHHHHhhcCC-Ccc----EEEEcCCChHHHHHHHHHhhccC
Q 022865 246 PKDHD-KPIQQVLVDLTDG-GVD----YSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 246 ~~~~~-~~~~~~v~~~~~g-g~d----~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.+.+ .++.+.+.+++++ ++| +||||+|+...+..++++++++|
T Consensus 217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G 266 (349)
T TIGR03201 217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGG 266 (349)
T ss_pred CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCC
Confidence 76532 3566777888876 776 89999999888999999999983
No 23
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=3e-39 Score=295.32 Aligned_cols=251 Identities=25% Similarity=0.334 Sum_probs=202.1
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC---CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++...+.+++++++|.|+|+++||||||++++||++|++.+.|.++. ..+|.++|||++|+|+++|++ ++|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 688888755444999999999999999999999999999999999886532 246889999999999999999 8999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..+...|+.|.+|..++.+.|...... ..|....+ |+|+||+.++.+.++++|++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~------------------G~~aey~~~~~~~~~~~P~~ 140 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLH------------------GFMREYFVDDPEYLVKVPPS 140 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCC------------------ccceeEEEeccccEEECCCC
Confidence 999999988889999999999999999875321 11221122 49999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhh------hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHHHh
Q 022865 167 APLDKVCLLGCGVPTGLGAVWN------TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI---DPKKFDRAKN 237 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~------~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~---~~~~~~~~~~ 237 (291)
++ + ++++..++.+++.++.. ....+++++|+|+|+|++|++++|+||++|+ +|+++++ +++|++++++
T Consensus 141 ~~-~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~ 217 (355)
T cd08230 141 LA-D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE 217 (355)
T ss_pred CC-c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence 98 3 34444455555444322 2235789999999999999999999999999 7999887 6889999999
Q ss_pred cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 238 ~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+|++. +++.+ .++.+ . . ..+++|+||||+|.+..+..++++++++|
T Consensus 218 ~Ga~~-v~~~~--~~~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G 263 (355)
T cd08230 218 LGATY-VNSSK--TPVAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPNG 263 (355)
T ss_pred cCCEE-ecCCc--cchhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCCc
Confidence 99986 55544 23322 1 1 12489999999999888999999999983
No 24
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=7e-39 Score=290.08 Aligned_cols=243 Identities=23% Similarity=0.317 Sum_probs=210.7
Q ss_pred EEEecCC----CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 13 AVAWEPN----KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 13 ~~~~~~~----~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
+.+..+| +.++++++|.|.|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+.+++|++|
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG 81 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence 4455554 348999999999999999999999999999999998876544457899999999999999999999999
Q ss_pred CEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 89 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 89 d~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
|+|++.+. ..|+.|.+|..++.+.|+++.. .|.. .+ |+|++|+.++.+.++++|+++
T Consensus 82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWD-TD------------------GGYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcc-cC------------------CcceeEEEeccccEEECCCCC
Confidence 99987654 4799999999999999997643 2221 23 499999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++++.+++.+.|+|+++ ...+++++++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++++++..
T Consensus 140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 9999999999999999987 46789999999999999999999999999999 799999999999999999999988753
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
+.. .+++|+++++.+....+..++++++++ |+
T Consensus 218 ~~~-----------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~ 249 (329)
T TIGR02822 218 DTP-----------PEPLDAAILFAPAGGLVPPALEALDRG-GV 249 (329)
T ss_pred ccC-----------cccceEEEECCCcHHHHHHHHHhhCCC-cE
Confidence 211 126899999998888999999999998 53
No 25
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.2e-38 Score=293.15 Aligned_cols=257 Identities=24% Similarity=0.307 Sum_probs=210.1
Q ss_pred EEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 022865 12 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV 91 (291)
Q Consensus 12 a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V 91 (291)
+++..+.++.+++.+++.|.|+++||+|||.+++||++|++++.|.+....+|.++|||++|+|+++|+.+++|++||+|
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 45555555568889999999999999999999999999999998865434578999999999999999999999999999
Q ss_pred eecCCC-CCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChh
Q 022865 92 IPCYQA-ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLD 170 (291)
Q Consensus 92 ~~~~~~-~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~ 170 (291)
++.+.. .|+.|.+|+.++.++|++..... .+.. ..| ....|+|+||+.++.+.++++|++++++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~lP~~ls~~ 153 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTY-NSRS-SDG-------------TRNQGGYSDVIVVDHRFVLSIPDGLPSD 153 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccc-cccc-cCC-------------CcCCCccccEEEEchHHeEECCCCCCHH
Confidence 866654 69999999999999999864310 0000 001 0113499999999999999999999999
Q ss_pred hhhhhcccchhhhhhhhhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhcCCCEEeCCCC
Q 022865 171 KVCLLGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 171 ~aa~l~~~~~ta~~~~~~~~~-~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~~~~~~ga~~~i~~~~ 248 (291)
+++.+.+...|+|+++..... .+++++|+|.|+|++|++++|+|+++|+ +|++++.+++ ++++++++|++.++++.+
T Consensus 154 ~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~ 232 (375)
T PLN02178 154 SGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD 232 (375)
T ss_pred HcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC
Confidence 999999999999987744433 3689999999999999999999999999 7888877654 478889999999888654
Q ss_pred CCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 249 ~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
. +.+.+.++ ++|+||||+|.+..+..++++++++ |+
T Consensus 233 --~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~ 268 (375)
T PLN02178 233 --S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GK 268 (375)
T ss_pred --H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CE
Confidence 1 24445443 6999999999987899999999998 53
No 26
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.8e-38 Score=289.26 Aligned_cols=267 Identities=23% Similarity=0.285 Sum_probs=219.7
Q ss_pred CCCCCcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCC
Q 022865 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGE 80 (291)
Q Consensus 1 m~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~ 80 (291)
|-+-+....++|+++..++.++.+++++.|+|+++||+||+.++++|++|+..+.+.+....+|.++|||++|+|+++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~ 80 (357)
T PLN02514 1 MGSLEAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGS 80 (357)
T ss_pred CCccCCCceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECC
Confidence 33444446799999999999999999999999999999999999999999999988765446789999999999999999
Q ss_pred CCCCCCCCCEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccc
Q 022865 81 GVTEVQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS 159 (291)
Q Consensus 81 ~~~~~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 159 (291)
.+++|++||+|++.+. ..|+.|.+|..+..+.|.+.......++ ..| ....|+|++|+.++.+.
T Consensus 81 ~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~--~~g-------------~~~~G~~aey~~v~~~~ 145 (357)
T PLN02514 81 DVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY--TDG-------------KPTQGGFASAMVVDQKF 145 (357)
T ss_pred CcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccc--cCC-------------ccCCCccccEEEEchHH
Confidence 9999999999986554 3699999999999999987532100000 001 11235999999999999
Q ss_pred eEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc
Q 022865 160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF 238 (291)
Q Consensus 160 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ 238 (291)
++++|+++++++++.+++++.|+|+++......+++++++|+|+|++|++++|+||++|+ ++++++.++++++.+ +++
T Consensus 146 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~ 224 (357)
T PLN02514 146 VVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHL 224 (357)
T ss_pred eEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhc
Confidence 999999999999999999999999987665666899999999999999999999999999 788777777766554 579
Q ss_pred CCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 239 ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
|++.+++..+ . ..+.+.+. ++|++|||+|....+..++++++++|
T Consensus 225 Ga~~~i~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G 269 (357)
T PLN02514 225 GADDYLVSSD--A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDG 269 (357)
T ss_pred CCcEEecCCC--h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCC
Confidence 9988776543 1 23444443 69999999998778999999999983
No 27
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=2.2e-38 Score=288.64 Aligned_cols=251 Identities=25% Similarity=0.395 Sum_probs=212.9
Q ss_pred eeEEEEecCCCCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++.+++. ++++++|.|.| .++||+|||.++++|++|+..+..... ..+|.++|||++|+|+++|+.+++|++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-HYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-CCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 68999998875 99999999997 699999999999999999875432211 2357899999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|++.+..+|+.|.+|..+..+.|..... .|.. . .|+|++|+.++.+.++++|++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~------------------~G~~aey~~v~~~~~~~lP~~~s 136 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSR-R------------------DGGNAEYIVVKRKNLFALPTDMP 136 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCcce---eccC-C------------------CCccceeEEeehHHeEECcCCCC
Confidence 999999999999999999999999986432 1211 2 34999999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
+++++.+. ++.++|+++ ....++++++|+|+|+|++|++++|+|+++|+..|++++++++++++++++|++.+++++.
T Consensus 137 ~~~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 214 (347)
T PRK10309 137 IEDGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214 (347)
T ss_pred HHHhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence 99988764 455677764 5677889999999999999999999999999966899999999999999999999988765
Q ss_pred CCchHHHHHHhhcCC-Ccc-EEEEcCCChHHHHHHHHHhhccC
Q 022865 249 HDKPIQQVLVDLTDG-GVD-YSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 249 ~~~~~~~~v~~~~~g-g~d-~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.. .+.+.+++.+ ++| ++|||+|+...+..++++++++|
T Consensus 215 --~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G 254 (347)
T PRK10309 215 --MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRA 254 (347)
T ss_pred --cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCC
Confidence 23 3456666655 888 99999999888999999999983
No 28
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=6e-38 Score=286.17 Aligned_cols=253 Identities=31% Similarity=0.517 Sum_probs=219.9
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC---C--------CCCCCcccccceeEEEEEe
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---P--------EGLFPCILGHEAAGIVESV 78 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~---~--------~~~~p~~~G~e~~G~Vv~~ 78 (291)
|||+++.+++. +++++++.|.|.++||+||+.++++|++|+..+.+.. + ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 68999988765 9999999999999999999999999999988765321 1 1136889999999999999
Q ss_pred CCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc
Q 022865 79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (291)
Q Consensus 79 G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 158 (291)
|+++++|++||+|+..+...|++|.+|+.+..+.|+.... .|.... .|+|++|+.++.+
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------------------~g~~a~~~~~~~~ 138 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGG------------------GGGFAEYVVVPAY 138 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCC------------------CCceeeEEEechH
Confidence 9999999999999999888999999999999999985432 111101 2499999999999
Q ss_pred ceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc
Q 022865 159 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238 (291)
Q Consensus 159 ~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ 238 (291)
.++++|+++++++++.+ .++.++|+++ ...+++++++|+|+|+|.+|++++|+|+.+|+.+|+++++++++.++++++
T Consensus 139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ 216 (351)
T cd08233 139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216 (351)
T ss_pred HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 99999999999988766 5788999987 778899999999999999999999999999997899999999999999999
Q ss_pred CCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 239 GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 239 ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
|++.++++++ .++.+.+++++++ ++|+|||++|....+..++++|+++
T Consensus 217 ga~~~i~~~~--~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~ 265 (351)
T cd08233 217 GATIVLDPTE--VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR 265 (351)
T ss_pred CCCEEECCCc--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC
Confidence 9999998775 5677788888776 7999999999877899999999988
No 29
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=8.7e-38 Score=286.12 Aligned_cols=263 Identities=28% Similarity=0.457 Sum_probs=225.6
Q ss_pred eEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC------
Q 022865 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE------ 84 (291)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~------ 84 (291)
||+++.++++.+++++++.|.|+++||+||+.++++|++|+....|.++...+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 78999998877999999999999999999999999999999998887653467889999999999999999986
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc-ceEEc
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV-SVAKI 163 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~i 163 (291)
|++||+|+..+..+|++|..|..+.++.|.+.... |.....+ .....|+|++|+.++.+ .++++
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~---~~~~~~~------------~~~~~g~~a~~~~v~~~~~~~~l 146 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY---GHEASCD------------DPHLSGGYAEHIYLPPGTAIVRV 146 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchhc---ccccccc------------CCCCCcccceEEEecCCCceEEC
Confidence 99999999999999999999999999999976542 2210000 00123599999999986 79999
Q ss_pred CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
|+++++..++++++++.|+|+++......+++++|||+|+|.+|++++++|+.+|+++|+++++++++.++++++|++.+
T Consensus 147 P~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~v 226 (361)
T cd08231 147 PDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADAT 226 (361)
T ss_pred CCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeE
Confidence 99999999998889999999988766666799999999999999999999999999789999999999999999999988
Q ss_pred eCCCCCC-chHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 244 VNPKDHD-KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 244 i~~~~~~-~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++... .++...+.+.+++ ++|++|||+|+...+..++++++++
T Consensus 227 i~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~ 273 (361)
T cd08231 227 IDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG 273 (361)
T ss_pred EcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC
Confidence 8876522 2233567777776 8999999999877799999999988
No 30
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.5e-38 Score=265.31 Aligned_cols=232 Identities=28% Similarity=0.350 Sum_probs=215.6
Q ss_pred CcccceeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCC
Q 022865 5 GQVITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~ 82 (291)
..|+..|-+++.+.|.. +++++.|.|+|+++|++||..|+|+|..|..+.+|-+.+.+.|++||-|.+|+|+++|+.+
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv 83 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV 83 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence 46788899999988764 8999999999999999999999999999999999999877899999999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEE
Q 022865 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (291)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (291)
+++++||||.-.. ..|.|+++..+|...+++
T Consensus 84 tdrkvGDrVayl~-------------------------------------------------~~g~yaee~~vP~~kv~~ 114 (336)
T KOG1197|consen 84 TDRKVGDRVAYLN-------------------------------------------------PFGAYAEEVTVPSVKVFK 114 (336)
T ss_pred cccccccEEEEec-------------------------------------------------cchhhheeccccceeecc
Confidence 9999999997332 124899999999999999
Q ss_pred cCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC
Q 022865 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (291)
Q Consensus 163 iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~ 241 (291)
+|+.+++..|+++.+.++|||..+++-.++++|++|||+.+ |++|+++.|+++..|. .+|++.++.+|.+.+++.|+.
T Consensus 115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~ 193 (336)
T KOG1197|consen 115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE 193 (336)
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence 99999999999999999999998989999999999999965 9999999999999999 899998999999999999999
Q ss_pred EEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 242 ~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.|+++. +++.+.+.+++++ |+|+++|++|. +++...+.+|++.|
T Consensus 194 h~I~y~~--eD~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~G 239 (336)
T KOG1197|consen 194 HPIDYST--EDYVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPMG 239 (336)
T ss_pred ceeeccc--hhHHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccCc
Confidence 9999987 7899999999988 99999999998 45999999999984
No 31
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.5e-37 Score=283.54 Aligned_cols=256 Identities=28% Similarity=0.399 Sum_probs=223.7
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.+++. +++++++.|.+.++||+||++++++|++|+..+.+......+|.++|||++|+|+++|+.+++|++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 78999999875 89999999999999999999999999999998877655446689999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCCC
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA 167 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~~ 167 (291)
+|+..+..+|++|..|..++.+.|.+... +.++. ....|+|++|+.++.+ .++++|+++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~--~~~~~-----------------~~~~g~~~~y~~v~~~~~~~~~lP~~~ 140 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLG--GWKFS-----------------NFKDGVFAEYFHVNDADANLAPLPDGL 140 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCC--Ccccc-----------------CCCCcceeEEEEcchhhCceEECCCCC
Confidence 99998878999999999999999987531 11110 1123499999999874 899999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++++.+++.+.|+|+++ ....++++++|||+|+|++|++++|+|+++|+..|++++++++++++++++|++.+++++
T Consensus 141 ~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK 219 (351)
T ss_pred CHHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence 9999999988999999974 677899999999998899999999999999997799999999999999999999998876
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
. .++.+.+.+++.+ ++|++||++|++..+..++++++++
T Consensus 220 ~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~ 259 (351)
T cd08285 220 N--GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG 259 (351)
T ss_pred C--CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC
Confidence 5 4566677777665 8999999999888899999999988
No 32
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=2.3e-37 Score=283.95 Aligned_cols=276 Identities=40% Similarity=0.741 Sum_probs=229.2
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
++|||+++.++++++++++.+.|.+.++||+||+.++++|++|+..+.+.++ ..+|.++|||++|+|+++|+++..|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 5799999998777799999999999999999999999999999999888654 346889999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccC-CCce-ecccCCcceeeeEEecccceEEcCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSIN-GKPI-YHFMGTSTFSQYTVVHDVSVAKIDP 165 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~iP~ 165 (291)
||+|++.+. .|+.|..|..+..++|.+.......|.. .+|-.-+... |.+. -+++..|+|++|+.++.++++++|+
T Consensus 80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~ 157 (365)
T cd08278 80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK 157 (365)
T ss_pred CCEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence 999998764 8999999999999999865431111111 1110000000 0000 0123457999999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++++.++.+++++.|||.++.....++++++|+|+|+|.+|++++|+|+++|+..+++++++++|+++++++|++.+++
T Consensus 158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~ 237 (365)
T cd08278 158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN 237 (365)
T ss_pred CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEec
Confidence 99999999999999999998877888999999999988999999999999999977999999999999999999998888
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++. .++.+.+.++++.++|+++||+|....+..++++++++
T Consensus 238 ~~~--~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~ 278 (365)
T cd08278 238 PKE--EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR 278 (365)
T ss_pred CCC--cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC
Confidence 765 45666777777448999999999877899999999987
No 33
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=2.4e-37 Score=281.43 Aligned_cols=239 Identities=18% Similarity=0.233 Sum_probs=192.5
Q ss_pred ceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC----CCCCcccccceeEEEEEeCCCCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE----GLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.-|++++.++++ +++++.+.|. +++||||||+++|||++|++++.|.+.+ ..+|.++|||++|+|+++|.+ +
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 457889988876 9999999995 9999999999999999999999886532 257999999999999998864 6
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||+|++.+..+|+ |+.| ...+.|.+... .|.. .+ |+|+||+.++.+.++++|
T Consensus 78 ~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~vP 132 (341)
T cd08237 78 YKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRF---RSSG-YD------------------GFMQDYVFLPPDRLVKLP 132 (341)
T ss_pred cCCCCEEEECCCCCch-hccc--chhccCCCcce---eEec-CC------------------CceEEEEEEchHHeEECC
Confidence 9999999998877776 5556 35567765432 1111 23 389999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhh--hcCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhcCCC
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVT 241 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~--~~~~~~g~~vlI~G~g~vG~~ai~~a~~-~g~~~v~~~~~~~~~~~~~~~~ga~ 241 (291)
+++++++|+++. +++++|+++.. ...+++|++|||+|+|++|++++|++++ +|..+|++++++++|++++++++++
T Consensus 133 ~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~ 211 (341)
T cd08237 133 DNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADET 211 (341)
T ss_pred CCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCce
Confidence 999998877554 78888887643 3456889999999999999999999986 6665899999999999999886654
Q ss_pred EEeCCCCCCchHHHHHHhhcCC-CccEEEEcCC---ChHHHHHHHHHhhccCCC
Q 022865 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG---NVSVMRAALECCHKVSGT 291 (291)
Q Consensus 242 ~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g---~~~~~~~~~~~l~~~gg~ 291 (291)
..++ + .... ++|+|||++| .+..+..++++++++ |+
T Consensus 212 ~~~~------~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~ 251 (341)
T cd08237 212 YLID------D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GT 251 (341)
T ss_pred eehh------h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cE
Confidence 3221 1 1112 6999999999 467899999999998 53
No 34
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=2.4e-36 Score=273.82 Aligned_cols=251 Identities=28% Similarity=0.485 Sum_probs=220.2
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.+++.++++++++.|.+.++||+||+.++++|++|+..+.+..+...+|.++|||++|+|+++|+.+++|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 79999999866799999999999999999999999999999999888654445688999999999999999999999999
Q ss_pred EEeecC-CCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 90 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 90 ~V~~~~-~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
+|++.+ ...|++|.+|..+..+.|.+... .|.. .+ |+|++|+.++.+.++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~-~~------------------g~~a~~~~v~~~~~~~lp~~~~ 138 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVT-RD------------------GGYAEYMLAPAEALARIPDDLD 138 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc---cCcc-cC------------------CcceeEEEEchhheEeCCCCCC
Confidence 998754 46799999999999999997653 2221 12 3899999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
+.+++.+++++.++|+++.. ..+.++++|||+|+|.+|++++++|+++|+ +|++++++++++++++++|+++++++..
T Consensus 139 ~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 216 (333)
T cd08296 139 AAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK 216 (333)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence 99999999999999998744 588999999999999999999999999999 7999999999999999999998888765
Q ss_pred CCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 249 ~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++.+.+.++ +++|++||++|....+..++++++++
T Consensus 217 --~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~ 252 (333)
T cd08296 217 --EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR 252 (333)
T ss_pred --ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC
Confidence 3455566655 36999999998777899999999988
No 35
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.2e-36 Score=274.32 Aligned_cols=251 Identities=25% Similarity=0.415 Sum_probs=215.4
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.+++. +++++++.|.|.++|++||+.++++|++|+..+.+..+..++|.++|||++|+|+++|+.++.|++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 68999998774 99999999999999999999999999999999888765446789999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|+..+...|+.|.+|..+++++|.+... .++. ..|+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~~~~~~~~~~~ip~~~~~ 137 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVH-------------------RDGGFSEYAVVPAKNAHRIPDAIAD 137 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCce---EEEc-------------------cCCcceeeEEechHHeEECcCCCCH
Confidence 99999988999999999999999975432 1111 1248999999999999999999998
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~-~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
+.++ +..++.++|. +....+++++++|+|+|+|.+|++++|+|+. +|+..+++++++++|+++++++|+++++++++
T Consensus 138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 215 (339)
T PRK10083 138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ 215 (339)
T ss_pred HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 8876 4467788885 5577789999999999999999999999996 69977888999999999999999999988765
Q ss_pred CCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 249 ~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++.+.+... +.++|++||++|....+..++++++++
T Consensus 216 --~~~~~~~~~~-g~~~d~vid~~g~~~~~~~~~~~l~~~ 252 (339)
T PRK10083 216 --EPLGEALEEK-GIKPTLIIDAACHPSILEEAVTLASPA 252 (339)
T ss_pred --ccHHHHHhcC-CCCCCEEEECCCCHHHHHHHHHHhhcC
Confidence 3455555331 125789999999877899999999998
No 36
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=5.2e-36 Score=273.28 Aligned_cols=254 Identities=27% Similarity=0.461 Sum_probs=219.9
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC---------CCCCcccccceeEEEEEeCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---------GLFPCILGHEAAGIVESVGE 80 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---------~~~p~~~G~e~~G~Vv~~G~ 80 (291)
|||+++.++++ +++++++.|++.+++|+||++++++|+.|+.++.|.... .++|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 68999988875 999999999999999999999999999999988775311 14678899999999999999
Q ss_pred CCC--CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc
Q 022865 81 GVT--EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (291)
Q Consensus 81 ~~~--~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 158 (291)
.++ .|++||+|+..+..+|+.|.+|..++.+.|..... +|+.. ...|+|++|+.++.+
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~-----------------~~~g~~~~~~~~~~~ 139 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQN-----------------NVNGGMAEYMRFPKE 139 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc---eeecc-----------------CCCCcceeeEEcccc
Confidence 998 89999999999999999999999999999986432 22210 023499999999987
Q ss_pred -ceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 159 -SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 159 -~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
.++++|++++++.++.+ .++.++|.++ +..+++++++|+|.|+|.+|++++++|+++|+..++++++++++.+++++
T Consensus 140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 217 (350)
T cd08256 140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK 217 (350)
T ss_pred cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence 67899999999999888 7889999987 77889999999997789999999999999998778899999999999999
Q ss_pred cCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 238 FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 238 ~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+|++.+++.+. .++.+.+.+++++ ++|++||++|....+..++++++++
T Consensus 218 ~g~~~v~~~~~--~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~ 267 (350)
T cd08256 218 FGADVVLNPPE--VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL 267 (350)
T ss_pred cCCcEEecCCC--cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC
Confidence 99988887764 4666777777776 8999999999766789999999988
No 37
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=4.7e-36 Score=272.14 Aligned_cols=254 Identities=30% Similarity=0.466 Sum_probs=225.1
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++..+++++++.+.+.|.+.+++++||+.++++|++|+..+.+.+. ...+|.++|||++|+|+++|+++.+|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 68999998877899999999999999999999999999999998877654 335688999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..+..+|+.|..|..+..++|++... .|+. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIG-TD------------------GGFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCcc-CC------------------CcceeeEEecHHHeEECCCC
Confidence 99999999989999999999999999998765 2332 23 39999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~-~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++++|+.+|..+|+++.+++++.++++++|++++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~ 218 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLN 218 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEc
Confidence 99999999999999999987665 46888999999999889999999999999338899989999999999999998888
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++. . +.+.+.++.++ ++|+++|++|....+..++++|+++
T Consensus 219 ~~~--~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~ 259 (340)
T cd05284 219 ASD--D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG 259 (340)
T ss_pred CCc--c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC
Confidence 765 3 67778887766 8999999999877799999999988
No 38
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=7.7e-36 Score=271.34 Aligned_cols=256 Identities=32% Similarity=0.505 Sum_probs=224.8
Q ss_pred eeEEEEecCCCCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++.+++. +++.+++.|.| .++||+||+.++++|++|+..+.+.++...+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 57999988776 89999999999 99999999999999999999988877656678999999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 166 (291)
|+|+..+..+|+.|.+|..+...+|.+.......+ ....|+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~~~v~~~~~~~~~lP~~ 140 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLG-------------------NRIDGGQAEYVRVPYADMNLAKIPDG 140 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCcccccc-------------------cCCCCeeeEEEEecchhCeEEECCCC
Confidence 99999999999999999999999998755321101 1223599999999987 99999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++++++.+++.+.|||+++ ...+++++++|||.|+|.+|.+++|+|+.+|+.+|+++++++++.++++++|++.++++
T Consensus 141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 219 (347)
T cd05278 141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP 219 (347)
T ss_pred CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 99999999999999999987 67789999999998889999999999999997578888889999999999999998887
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+. .++.+.+.+++++ ++|++||++|....+..++++|+++
T Consensus 220 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~ 260 (347)
T cd05278 220 KN--GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG 260 (347)
T ss_pred Cc--chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC
Confidence 75 4577778777765 8999999999866799999999988
No 39
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.1e-35 Score=272.64 Aligned_cols=274 Identities=46% Similarity=0.816 Sum_probs=230.0
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++...+.++++++++.|.+.++||+||+.++++|+.|+.++.+.++ ..+|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 68999999888899999999999999999999999999999998888664 35678999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|+..+..+|++|.+|++++.+.|.+..... +|.. .++.++....|...+.+...|+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 157 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGIL-GGQL-PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL 157 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCccccccc-cccc-CCCcccccccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence 9999999999999999999999998754210 0000 0111111111222222344579999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
++++.+++.+.++|.++.....+.++++|||+|+|.+|++++++|+.+|+.+|+++++++++.++++++|++++++.+.
T Consensus 158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~- 236 (363)
T cd08279 158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE- 236 (363)
T ss_pred HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC-
Confidence 9999999999999998878888999999999988999999999999999955999999999999999999988887765
Q ss_pred CchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++...+.++..+ ++|++||++++...+..++++++++
T Consensus 237 -~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~ 275 (363)
T cd08279 237 -DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG 275 (363)
T ss_pred -ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC
Confidence 4566677777654 8999999999777799999999988
No 40
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2.9e-35 Score=272.02 Aligned_cols=274 Identities=29% Similarity=0.399 Sum_probs=222.8
Q ss_pred eeEEEEecCCCCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++.+++. +++++++.|.| .+++|+||+.++++|++|+.++.|.++..++|.++|||++|+|+++|+++++|++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 78999987754 99999999988 59999999999999999999998877655678999999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 166 (291)
|+|+..+...|++|.+|..+..++|++....... .+..|.....+.|.........|+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~ 157 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEM--AKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDD 157 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCccccccc--ccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCC
Confidence 9999998889999999999999999976432100 0000000000000000000124699999999987 89999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++++++.+++.+.|+|+++ ....+.++++|||+|+|.+|++++++|+++|+.+|+++++++++++++++++...++++
T Consensus 158 ~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~ 236 (386)
T cd08283 158 LSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINF 236 (386)
T ss_pred CCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcC
Confidence 99999999999999999987 77889999999999889999999999999998679999999999999999854467766
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCCh---------------------HHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNV---------------------SVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~---------------------~~~~~~~~~l~~~ 288 (291)
... .++.+.+.+++++ ++|+|||++|++ ..+..++++++++
T Consensus 237 ~~~-~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 299 (386)
T cd08283 237 EEV-DDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG 299 (386)
T ss_pred Ccc-hHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC
Confidence 541 1477778887776 899999999853 4688899999988
No 41
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=3e-35 Score=267.61 Aligned_cols=255 Identities=31% Similarity=0.452 Sum_probs=223.3
Q ss_pred eeEEEEecCCCCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++.+++. +++++++.|.| .++||+||++++++|++|+.++.|.++...+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 68999988876 99999999986 89999999999999999999998876555568899999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 166 (291)
|+|+..+...|+.|.+|..+..+.|...... .|.. .+ |+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~~~lp~~ 138 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNL-ID------------------GTQAEYVRIPHADNSLYKLPEG 138 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc--cccc-cC------------------CeeeeEEEcccccCceEECCCC
Confidence 9999998889999999999999999865432 1111 22 489999999987 89999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++.+++.+.+.+.++|.++....++.+++++||.|+|.+|.+++|+|+.+|..+|+++++++++.++++++|++.++++
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~ 218 (345)
T cd08286 139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS 218 (345)
T ss_pred CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence 99999999999999999877677889999999999889999999999999994489999999999999999999988887
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.. .++...+.+++.+ ++|++|||+|....+..++++|+++
T Consensus 219 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~ 259 (345)
T cd08286 219 AK--GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG 259 (345)
T ss_pred cc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC
Confidence 65 4566667777665 8999999999877899999999887
No 42
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=4e-35 Score=267.37 Aligned_cols=255 Identities=29% Similarity=0.456 Sum_probs=222.8
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC------------CCCCCcccccceeEEEEE
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP------------EGLFPCILGHEAAGIVES 77 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~------------~~~~p~~~G~e~~G~Vv~ 77 (291)
|||+++..++.+++++++|.|++.++||+||+.++++|++|+..+.+.++ ...+|.++|||++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 78999998888899999999999999999999999999999998877543 224568899999999999
Q ss_pred eCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc
Q 022865 78 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (291)
Q Consensus 78 ~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 157 (291)
+|+.++++++||+|+..+...|++|.+|..+..++|..... .|.. . .|.+++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIF-Q------------------DGGYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeee-c------------------cCcceeeEEecH
Confidence 99999999999999999999999999999999999976532 1211 2 248999999999
Q ss_pred cceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
+.++++|+++++.+++.+.+.+.|||+++.....++++++|+|+|+|.+|++++|+|+.+|+++|+++++++++++.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999988766666789999999889999999999999999788899899999999999
Q ss_pred cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 238 ~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+|++.+++.++ .++.+.+.++.++++|++||++|....+..++++|+++
T Consensus 219 ~g~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~ 267 (350)
T cd08240 219 AGADVVVNGSD--PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG 267 (350)
T ss_pred hCCcEEecCCC--ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC
Confidence 99988877654 45556677666558999999999877899999999988
No 43
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=6.6e-35 Score=265.36 Aligned_cols=255 Identities=32% Similarity=0.558 Sum_probs=224.5
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++..++.++++++++.|.+.+++|+||+.++++|++|+..+.+..+...+|.++|+|++|+|+++|+.++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 79999998887899999999999999999999999999999999888766556688999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCCC
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA 167 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~~ 167 (291)
+|+......|++|.+|+.|+.++|.++.. .++. .+ |+|++|+.++.. .++++|+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~~iP~~~ 138 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFT-HP------------------GSFAEYVAVPRADVNLVRLPDDV 138 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc---cccC-CC------------------CcceeEEEcccccCceEECCCCC
Confidence 99886667899999999999999998642 2221 12 489999999874 999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++++.+++++.|+|+++.....+.++++|+|+|+|.+|++++++|+.+|+ +|+++.+++++.++++++|++++++++
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~ 217 (345)
T cd08260 139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS 217 (345)
T ss_pred CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence 9999999999999999988777889999999999999999999999999999 899998999999999999999998876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
. ..++.+.+.++..+++|++|||+|....+..++++++++
T Consensus 218 ~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~ 257 (345)
T cd08260 218 E-VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR 257 (345)
T ss_pred c-chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC
Confidence 4 235666677766558999999999777789999999988
No 44
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=9.6e-35 Score=266.69 Aligned_cols=276 Identities=32% Similarity=0.528 Sum_probs=228.1
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC---CC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE---VQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~---~~ 86 (291)
|||+++..++.++++++.+.|.++++||+||+.++++|++|+.++.+.++. .+|.++|||++|+|+++|+.+++ |+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 689999988777999999999999999999999999999999988876643 56789999999999999999988 99
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..+..+|+.|.+|..+..++|.+...+...+....+|...+.....+-......|.|++|+.++.+.++++|++
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~ 159 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPES 159 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCC
Confidence 99999998888999999999999999998653211110001111110000000000123469999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++.+++.+++.+.|+|+++.....+.++++|||+|+|.+|++++++|+.+|+.+++++++++++.++++++|++.+++.
T Consensus 160 is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~ 239 (367)
T cd08263 160 LDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNA 239 (367)
T ss_pred CCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecC
Confidence 99999999999999999988777788999999999889999999999999999559999899999999999999989887
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+. .++.+.+.+..++ ++|+|||++++...+..++++++++
T Consensus 240 ~~--~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~ 280 (367)
T cd08263 240 AK--EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG 280 (367)
T ss_pred Cc--ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC
Confidence 65 4566777777655 8999999999975789999999988
No 45
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=3.8e-35 Score=271.74 Aligned_cols=260 Identities=21% Similarity=0.272 Sum_probs=218.2
Q ss_pred cccceeEEEEec--CCC---CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC----------CCCCCcccccc
Q 022865 6 QVITCKAAVAWE--PNK---PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFPCILGHE 70 (291)
Q Consensus 6 ~~~~~~a~~~~~--~~~---~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~----------~~~~p~~~G~e 70 (291)
.|.+|||+++.. .+. .+++++++.|.++++||+||+.++++|++|+..+.+... ....+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 457899998853 232 378899999999999999999999999999988766411 01123588999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCccee
Q 022865 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS 150 (291)
Q Consensus 71 ~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~ 150 (291)
++|+|+++|+.++.|++||+|++.+...|++|..|..+..++|+.... +|+... .|+|+
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~------------------~g~~a 147 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETN------------------YGSFA 147 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCC------------------CCcce
Confidence 999999999999999999999999999999999999999999986533 333212 24999
Q ss_pred eeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhh--cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 022865 151 QYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT--AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 227 (291)
Q Consensus 151 ~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~--~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~ 227 (291)
+|+.++...++++|+++++++++.+++++.|||+++... .+++++++|+|+|+ |++|++++++|+++|+ +++++++
T Consensus 148 ~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~ 226 (393)
T cd08246 148 QFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVS 226 (393)
T ss_pred eEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeC
Confidence 999999999999999999999999999999999987544 67899999999997 9999999999999999 7778889
Q ss_pred ChhhHHHHHhcCCCEEeCCCCCC--------------------chHHHHHHhhcCC--CccEEEEcCCChHHHHHHHHHh
Q 022865 228 DPKKFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG--GVDYSFECIGNVSVMRAALECC 285 (291)
Q Consensus 228 ~~~~~~~~~~~ga~~~i~~~~~~--------------------~~~~~~v~~~~~g--g~d~v~d~~g~~~~~~~~~~~l 285 (291)
+++++++++++|++.+++.++.+ ..+.+.+.+++++ ++|++||++|+ ..+..+++++
T Consensus 227 s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l 305 (393)
T cd08246 227 SEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVC 305 (393)
T ss_pred CHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHh
Confidence 99999999999999988864321 1356677777765 79999999998 5588999999
Q ss_pred hcc
Q 022865 286 HKV 288 (291)
Q Consensus 286 ~~~ 288 (291)
+++
T Consensus 306 ~~~ 308 (393)
T cd08246 306 DRG 308 (393)
T ss_pred ccC
Confidence 988
No 46
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=1.3e-34 Score=265.51 Aligned_cols=257 Identities=26% Similarity=0.420 Sum_probs=210.2
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.+++++.+..+. .+++++++.|.|.++||+||++++++|++|+.++.+... ...+|.++|||++|+|+++|+.+++
T Consensus 16 ~~~~~~~~~~~~-~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 16 EENMAAWLVGVN-TLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred cccceEEEecCC-ceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence 344555555554 489999999889999999999999999999998876321 1235788999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||+|+..+...|++|..|..+..+.|+.... ++.... .|+|++|+.++.+.++++|
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~~------------------~g~~~~y~~v~~~~~~~~P 153 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPPV------------------HGSLANQVVHPADLCFKLP 153 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCCC------------------CCcccceEEcchHHeEECC
Confidence 9999999999999999999999999999986422 111111 2499999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
+++++.+++.. .++.++|+++ ...++.++++|+|+|+|++|++++++|+.+|+..|+++++++++.++++++|++.++
T Consensus 154 ~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~ 231 (364)
T PLN02702 154 ENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIV 231 (364)
T ss_pred CCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence 99999888752 2444577765 677889999999998899999999999999997788999999999999999999887
Q ss_pred CCCCCCchHHHHHHhh---cCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDL---TDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~---~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++.....++.+.+.++ .++++|+|||++|+...+..++++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~ 278 (364)
T PLN02702 232 LVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG 278 (364)
T ss_pred ecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC
Confidence 6543334555555544 3348999999999877899999999988
No 47
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.4e-34 Score=262.94 Aligned_cols=255 Identities=29% Similarity=0.448 Sum_probs=216.9
Q ss_pred eeEEEEecCCCCeEEEeeecCCCC-CCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++..++ .+++++++.|.|. ++||+||+.++++|+.|+.+..+.++ ..+|.++|||++|+|+++|++++.+++|
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 6789998764 5999999999985 99999999999999999998877654 3457889999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 166 (291)
|+|++.+..+|++|.+|+.+..+.|++... +|.. + .....|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~------------~~~~~g~~~~~~~v~~~~~~~~~~p~~ 140 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGL---FGYA---G------------SPNLDGAQAEYVRVPFADGTLLKLPDG 140 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCcc---cccc---c------------cCCCCCceeEEEEcccccCceEECCCC
Confidence 999999889999999999999999986532 1110 0 00113489999999864 99999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++++++.+++++.|+|+++. ...+.++++|+|+|+|.+|++++++|+.+|+.+|+++++++++.++++++|+. .++.
T Consensus 141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~ 218 (344)
T cd08284 141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF 218 (344)
T ss_pred CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence 999999999999999999874 47888999999998899999999999999976799998899999999999975 4554
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+. .++...+.+++++ ++|++||++|....+..++++++++
T Consensus 219 ~~--~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~ 259 (344)
T cd08284 219 ED--AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG 259 (344)
T ss_pred CC--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC
Confidence 43 4566777777765 8999999999877899999999887
No 48
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=6.5e-35 Score=271.66 Aligned_cols=247 Identities=20% Similarity=0.302 Sum_probs=199.1
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhh-cCCCC-C-----CCCCcccccceeEEEEEeCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDP-E-----GLFPCILGHEAAGIVESVGE 80 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~-~g~~~-~-----~~~p~~~G~e~~G~Vv~~G~ 80 (291)
|+|||+++.+++. ++++++|.|.|+++||+|||.++|||++|++.+ .+... . ..+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 5789999999885 999999999999999999999999999999976 44321 1 14688999999999999999
Q ss_pred CCC-CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc-
Q 022865 81 GVT-EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV- 158 (291)
Q Consensus 81 ~~~-~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~- 158 (291)
+++ .|++||+|++.+...|+.|..|.. +|+. .+| +|++|+.++.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~-~~G------------------~~aey~~v~~~~ 126 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYT-YPG------------------GLATYHIIPNEV 126 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCCC--------------cccc-CCC------------------cceEEEEecHHh
Confidence 998 599999999988888888776621 1111 233 99999999987
Q ss_pred ---ceEEcCCCCChhhhhhh-cccc-hhhhhhh--------hhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcC--CCeE
Q 022865 159 ---SVAKIDPQAPLDKVCLL-GCGV-PTGLGAV--------WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAG--ASRV 222 (291)
Q Consensus 159 ---~~~~iP~~~~~~~aa~l-~~~~-~ta~~~~--------~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g--~~~v 222 (291)
.++++|+++++++++.+ +... .+++.++ ....+++++++|+|+|+ |++|++++|+|+++| +.+|
T Consensus 127 ~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V 206 (410)
T cd08238 127 MEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL 206 (410)
T ss_pred ccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence 68999999999988854 2111 1233322 24567899999999985 999999999999985 4579
Q ss_pred EEEcCChhhHHHHHhc--------CCC-EEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 223 IGIDIDPKKFDRAKNF--------GVT-EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 223 ~~~~~~~~~~~~~~~~--------ga~-~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++++.+++|+++++++ |++ .++++.+ ..++.+.+.+++++ ++|++||++|....+..++++++++|
T Consensus 207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G 282 (410)
T cd08238 207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT-IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDG 282 (410)
T ss_pred EEEcCCHHHHHHHHHhccccccccCceEEEECCCc-cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCC
Confidence 9999999999999997 666 4566543 13567778888877 89999999998888999999999884
No 49
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=2.6e-34 Score=264.62 Aligned_cols=261 Identities=30% Similarity=0.435 Sum_probs=216.3
Q ss_pred eeEEEEecCCCCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
||++++.+++ +++++++|.|.+ .++|++||++++++|++|+..+.|..+ ..+|.++|||++|+|+++|+.+..+++|
T Consensus 1 m~~~~~~~~~-~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPG-NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCC-ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 5788888776 599999999996 899999999999999999999988765 3468899999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 166 (291)
|+|+..+..+|+.|..|..+..++|.+.......++ .|..+ .....|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~---~~~~~---------~~~~~g~~a~y~~v~~~~~~~~~lP~~ 146 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGA---YGYVD---------MGPYGGGQAEYLRVPYADFNLLKLPDR 146 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCccccccc---ccccc---------cCCCCCeeeeEEEeecccCcEEECCCC
Confidence 999998999999999999999999987532100000 00000 00012599999999976 89999999
Q ss_pred CChh---hhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 167 APLD---KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 167 ~~~~---~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
++++ .++.+..++.|+|+++ ....++++++|+|.|+|.+|++++|+|+++|+.+|++++++++|+++++++|+ ..
T Consensus 147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~ 224 (375)
T cd08282 147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IP 224 (375)
T ss_pred CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eE
Confidence 9998 4677778899999987 77889999999999889999999999999998678889999999999999998 45
Q ss_pred eCCCCCCchHHHHHHhhcCCCccEEEEcCCChH-----------HHHHHHHHhhcc
Q 022865 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS-----------VMRAALECCHKV 288 (291)
Q Consensus 244 i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~-----------~~~~~~~~l~~~ 288 (291)
+++.+ .++.+.+.+++++++|++|||+|... .+..++++++++
T Consensus 225 v~~~~--~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 278 (375)
T cd08282 225 IDFSD--GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG 278 (375)
T ss_pred eccCc--ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC
Confidence 55544 45666777776667999999999763 588999999988
No 50
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=2.4e-34 Score=266.85 Aligned_cols=260 Identities=22% Similarity=0.328 Sum_probs=218.5
Q ss_pred cccceeEEEEec--CCC---CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC----------CCCCC-ccccc
Q 022865 6 QVITCKAAVAWE--PNK---PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFP-CILGH 69 (291)
Q Consensus 6 ~~~~~~a~~~~~--~~~---~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~----------~~~~p-~~~G~ 69 (291)
.|.+|||+++.. .++ .+++.+++.|.|.++|++||+.++++|++|+....+... ....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 457899999965 443 499999999999999999999999999999877655321 11223 37999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcce
Q 022865 70 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTF 149 (291)
Q Consensus 70 e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (291)
|++|+|+++|+.++.|++||+|++.....|++|.+|..++.++|+.+.. +|+...+ |+|
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~------------------g~~ 142 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYETNF------------------GSF 142 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccCCC------------------ccc
Confidence 9999999999999999999999999999999999999999999986543 2222122 499
Q ss_pred eeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhh--hcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 022865 150 SQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID 226 (291)
Q Consensus 150 ~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~--~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~ 226 (291)
++|+.++.+.++++|+++++++++.+.+++.|+|+++.. ..++.++++++|+|+ |.+|++++++|+++|+ ++++++
T Consensus 143 ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~ 221 (398)
T TIGR01751 143 AEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVV 221 (398)
T ss_pred eEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEc
Confidence 999999999999999999999999999999999998654 467889999999998 9999999999999999 778888
Q ss_pred CChhhHHHHHhcCCCEEeCCCCCC--------------------chHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHh
Q 022865 227 IDPKKFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECC 285 (291)
Q Consensus 227 ~~~~~~~~~~~~ga~~~i~~~~~~--------------------~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l 285 (291)
++++++++++++|++.+++.++++ ..+.+.+.+++++ ++|++|||+|. ..+..+++++
T Consensus 222 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l 300 (398)
T TIGR01751 222 SSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVC 300 (398)
T ss_pred CCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhh
Confidence 889999999999999999865421 1355667777775 89999999997 5588999999
Q ss_pred hcc
Q 022865 286 HKV 288 (291)
Q Consensus 286 ~~~ 288 (291)
+++
T Consensus 301 ~~~ 303 (398)
T TIGR01751 301 RRG 303 (398)
T ss_pred ccC
Confidence 988
No 51
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=3.2e-34 Score=260.49 Aligned_cols=252 Identities=29% Similarity=0.438 Sum_probs=214.5
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
||++++.++++.+++.+.|.|.|+++||+||++++++|++|+.++.+.. ....+|.++|||++|+|+++|+.++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 6899999988889999999999999999999999999999998765532 1224678899999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..+..+|..|..|..+..++|++... .+.. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVN-RP------------------GAFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeec-CC------------------CcceeeEEechHHeEECcCC
Confidence 99999999999999999999999999987432 2211 22 49999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++.+++.+ .++.++++++.. ...++++|+|.|+|.+|++++|+|+++|+++|+++++++++.++++++|+++++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 998888754 455666554432 34589999998889999999999999999668888889999999999999999887
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+. .++.+.+.+++++ ++|+||||+|....+..++++++++
T Consensus 216 ~~--~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~ 256 (341)
T PRK05396 216 AK--EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG 256 (341)
T ss_pred cc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC
Confidence 65 4577778877765 8999999999888899999999988
No 52
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1e-33 Score=257.38 Aligned_cols=252 Identities=31% Similarity=0.481 Sum_probs=214.1
Q ss_pred eeEEEEecCCCCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
||++++.+++. +++.+.|.|.| +++||+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|+.+.++++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence 68999987765 99999999996 8999999999999999999988776542 457899999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 166 (291)
|+|+.....+|+.|.+|..+..++|.+... +|.. .+| +|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~g------------------~~~~~~~v~~~~~~~~~lP~~ 136 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAF-VDG------------------GQGEYVRVPLADGTLVKVPGS 136 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCc---ccCC-CCC------------------ceEEEEEcchhhCceEECCCC
Confidence 999886677899999999999999997543 2211 233 89999999864 99999999
Q ss_pred CChhhhh-----hhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC
Q 022865 167 APLDKVC-----LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (291)
Q Consensus 167 ~~~~~aa-----~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~ 241 (291)
++++.+. .+...+.++|+++ ....++++++++|.|+|.+|++++|+|+++|+..++++++++++.++++++|++
T Consensus 137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~ 215 (345)
T cd08287 137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT 215 (345)
T ss_pred CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence 9872221 1225678888876 467889999999988899999999999999996699999999999999999999
Q ss_pred EEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 242 ~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+++++. .++.+.+.+++++ ++|++||++|....+..++++++++
T Consensus 216 ~v~~~~~--~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~ 261 (345)
T cd08287 216 DIVAERG--EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG 261 (345)
T ss_pred eEecCCc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC
Confidence 9998875 4677778877766 8999999999888899999999887
No 53
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.3e-34 Score=258.67 Aligned_cols=247 Identities=28% Similarity=0.441 Sum_probs=215.5
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.++++++++++++.|.+.++|++||+.++++|++|+..+.+..+..++|.++|||++|+|+++|+.++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 68999999988899999999999999999999999999999998888765556688999999999999999998899999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|++....+|+.|.+|..++.+.|+.... +|.. . .|+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~~~~~~lp~~~~~ 138 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEE-L------------------DGFFAEYAKVKVTSLVKVPPNVSD 138 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCccccc---cccc-c------------------CceeeeeeecchhceEECCCCCCH
Confidence 99998888999999999999999988643 2211 1 248999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
.+++.+++.+.++|+++... .+.++++++|+|+ |.+|++++++|+.+|+ +|+++++++++++.++++ ++.+++.+
T Consensus 139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~- 214 (334)
T PRK13771 139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS- 214 (334)
T ss_pred HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence 99999999999999987555 8899999999988 9999999999999999 889888999999999888 66666543
Q ss_pred CCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 249 ~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++.+.+.++ +++|++|||+|+. .+..++++++++
T Consensus 215 ---~~~~~v~~~--~~~d~~ld~~g~~-~~~~~~~~l~~~ 248 (334)
T PRK13771 215 ---KFSEEVKKI--GGADIVIETVGTP-TLEESLRSLNMG 248 (334)
T ss_pred ---hHHHHHHhc--CCCcEEEEcCChH-HHHHHHHHHhcC
Confidence 344455554 3799999999985 488999999988
No 54
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.1e-33 Score=256.37 Aligned_cols=252 Identities=27% Similarity=0.447 Sum_probs=215.5
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++..+++...++++|.|.+.++||+||++++++|++|+..+.+..+. ..|.++|||++|+|+++|++++.|++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 789999988774448999999999999999999999999999988776543 3467899999999999999999999999
Q ss_pred EEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 90 HVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 90 ~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
+|++.+. ..|+.|.+|..+..+.|.+... .|+. .+ |+|++|+.++.+.++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~ 137 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYT-VD------------------GGMAEQCIVTADYAVKVPEGLD 137 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCccc---cCcc-cc------------------CcceeEEEEchHHeEeCCCCCC
Confidence 9987654 5799999999999999987643 2222 23 3999999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
+.+++.+++.+.|+|+++ ....++++++|||+|+|++|++++++|+.+ |+ +|++++++++++++++++|++.+++++
T Consensus 138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 215 (338)
T PRK09422 138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK 215 (338)
T ss_pred HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence 999999999999999987 778899999999999999999999999984 98 899999999999999999998888875
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.. .++.+.+.+..+ ++|++|++.++...+..++++++++
T Consensus 216 ~~-~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~ 254 (338)
T PRK09422 216 RV-EDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG 254 (338)
T ss_pred cc-ccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC
Confidence 31 345566776665 6896666666667799999999988
No 55
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.3e-33 Score=255.38 Aligned_cols=253 Identities=33% Similarity=0.502 Sum_probs=221.3
Q ss_pred eeEEEEecCCCC-eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC-CCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 10 CKAAVAWEPNKP-LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 10 ~~a~~~~~~~~~-~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
||++++..++++ +.+.+.+.|.+.+++|+||+.++++|+.|+..+.+.++ ...+|.++|+|++|+|+.+|+.++.|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 689999988887 68888899999999999999999999999999888765 3356789999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+..+..+|+.|.+|+.++.++|..+.. .|+. .+ |+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~ 138 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLG-ID------------------GGFAEYIVVPARALVPVPDGV 138 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccc-cC------------------CcceeeEEechHHeEECCCCC
Confidence 9999999989999999999999999965532 1221 22 489999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++.+++.++.++.|+|+++.....++++++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++..
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~ 217 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL 217 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999988777889999999999889999999999999999 799999999999999999998888766
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
. ....+.+ ....+ ++|+++||+|....+..++++|+++
T Consensus 218 ~--~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~ 256 (338)
T cd08254 218 D--DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG 256 (338)
T ss_pred C--cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC
Confidence 4 3444445 44444 8999999999888899999999998
No 56
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=2e-33 Score=254.79 Aligned_cols=250 Identities=35% Similarity=0.567 Sum_probs=217.7
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++..++. +++.+++.|.+.++|++|||.++++|+.|+....+..+...+|.++|+|++|+|+++|+.++.|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 68999988764 99999999999999999999999999999999888765555678999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|+..+..+|+.|..|..++.+.|...+. .++. ..|+|++|+.++.+ ++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~v~v~~~-~~~~p~~~~~ 136 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV---LGVH-------------------RDGGFAEYIVVPAD-ALLVPEGLSL 136 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe---eeec-------------------CCCcceeEEEechh-eEECCCCCCH
Confidence 99998888999999999999999953211 1111 13489999999999 9999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
++++++ ..+.++++++ ....+.++++|||+|+|.+|.+++|+|+.+|+ +|+++.+++++.++++++|+++++++..
T Consensus 137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~- 212 (337)
T cd08261 137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD- 212 (337)
T ss_pred HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc-
Confidence 998876 5777888866 77889999999999889999999999999999 8999988999999999999999998876
Q ss_pred CchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++.+.+.+++++ ++|++||++|+...+..++++|+++
T Consensus 213 -~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~ 251 (337)
T cd08261 213 -EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG 251 (337)
T ss_pred -cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC
Confidence 4577778877766 8999999998877789999999987
No 57
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1.9e-33 Score=259.71 Aligned_cols=255 Identities=27% Similarity=0.457 Sum_probs=213.4
Q ss_pred ceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC------C-CCCCCcccccceeEEEEEeCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD------P-EGLFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~------~-~~~~p~~~G~e~~G~Vv~~G~~ 81 (291)
.+.+.++..+ .+++++++.|.++++||+||+.++++|++|+..+.+.. + ...+|.++|||++|+|+++|++
T Consensus 28 ~~~~~~~~~~--~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~ 105 (384)
T cd08265 28 NLGSKVWRYP--ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKN 105 (384)
T ss_pred cceeEEEeCC--CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCC
Confidence 3445555543 49999999999999999999999999999998876321 1 1346789999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceE
Q 022865 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 161 (291)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 161 (291)
++.|++||+|++.+..+|+.|..|..+..++|..+.. .|+. .+ |+|++|+.++.+.++
T Consensus 106 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~-~~------------------g~~~~~v~v~~~~~~ 163 (384)
T cd08265 106 VKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFS-AD------------------GAFAEYIAVNARYAW 163 (384)
T ss_pred CCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeec-CC------------------CcceeeEEechHHeE
Confidence 9999999999999999999999999999999997653 2322 13 389999999999999
Q ss_pred EcCCCC-------Chhhhhhhcccchhhhhhhhhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 022865 162 KIDPQA-------PLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233 (291)
Q Consensus 162 ~iP~~~-------~~~~aa~l~~~~~ta~~~~~~~-~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~ 233 (291)
++|+++ ++. +++++.+++++|+++... .+++++++|+|+|+|.+|++++++|+.+|+.+|+++++++++.+
T Consensus 164 ~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~ 242 (384)
T cd08265 164 EINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRN 242 (384)
T ss_pred ECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 999863 444 555666889999987655 68999999999988999999999999999877999999999999
Q ss_pred HHHhcCCCEEeCCCCC-CchHHHHHHhhcCC-CccEEEEcCCCh-HHHHHHHHHhhcc
Q 022865 234 RAKNFGVTEFVNPKDH-DKPIQQVLVDLTDG-GVDYSFECIGNV-SVMRAALECCHKV 288 (291)
Q Consensus 234 ~~~~~ga~~~i~~~~~-~~~~~~~v~~~~~g-g~d~v~d~~g~~-~~~~~~~~~l~~~ 288 (291)
+++++|++.++++++. ..++.+.+.+++.+ ++|+|+|++|+. ..+..++++|+.+
T Consensus 243 ~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~ 300 (384)
T cd08265 243 LAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN 300 (384)
T ss_pred HHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC
Confidence 9999999988887642 23677778888876 899999999973 5688999999988
No 58
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=9.5e-34 Score=257.17 Aligned_cols=255 Identities=27% Similarity=0.382 Sum_probs=214.8
Q ss_pred eEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 022865 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 90 (291)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~ 90 (291)
|+++....+..+++++++.|.|.++|++||+.++++|++|+..+.+......+|.++|||++|+|+++|+.+++|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 57788888888999999999999999999999999999999998887655567899999999999999999999999999
Q ss_pred Eee-cCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 91 VIP-CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 91 V~~-~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
|+. .....|++|.+|..++.++|+++.... .|.. ..+ ....|+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~-------------~~~~g~~~~~~~v~~~~~~~lp~~~~~ 145 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-NGKY-PDG-------------TITQGGYADHIVVDERFVFKIPEGLDS 145 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcc-cccc-cCC-------------CcCCCcceeEEEechhheEECCCCCCH
Confidence 974 444689999999999999998864320 0100 000 123459999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
++++.+.+...++|+++ ....+.++++++|.|.|.+|++++++|+.+|+ +|+.++++++++++++++|++.+++...
T Consensus 146 ~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~- 222 (337)
T cd05283 146 AAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD- 222 (337)
T ss_pred HHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc-
Confidence 99999999999999976 44568999999998889999999999999999 8999999999999999999988887654
Q ss_pred CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++. .. .++++|++|||+|....+..++++++++
T Consensus 223 -~~~~---~~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~ 256 (337)
T cd05283 223 -PEAM---KK-AAGSLDLIIDTVSASHDLDPYLSLLKPG 256 (337)
T ss_pred -hhhh---hh-ccCCceEEEECCCCcchHHHHHHHhcCC
Confidence 2221 12 2348999999999876689999999887
No 59
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=4.8e-34 Score=256.22 Aligned_cols=222 Identities=25% Similarity=0.351 Sum_probs=177.5
Q ss_pred ceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecc-hhhhhhhcCCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALC-HTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~-~~D~~~~~g~~~~---~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
++||+++.+++. +++++.+.|.|+++||||||++++|| ++|+..+.|.++. ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 578999988765 99999999999999999999999996 7999988887543 2579999999999999999998 5
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||||+... ..|..|.. | .+ |+|+||+.++.+.++++|
T Consensus 79 ~~vGdrV~~~~----~~c~~~~~---------------~---~~------------------G~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVPG----SNCYEDVR---------------G---LF------------------GGASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEeC----cccccccc---------------c---cC------------------CcccceEEcCHHHceeCC
Confidence 99999998632 12222110 0 12 389999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
++++++. +.+. ...|+|+++.. . ..++++++|+|+|++|++++|+||++|+..|++++.++++++.+.++ .++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence 9998864 4444 57899998744 2 33688999999999999999999999996687888888888777654 344
Q ss_pred CCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
++.+ . .+.++|+||||+|++.+++.++++++++ |+
T Consensus 192 ~~~~---~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~ 226 (308)
T TIGR01202 192 DPEK---D--------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GE 226 (308)
T ss_pred Chhh---c--------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cE
Confidence 4321 0 1237999999999988899999999999 53
No 60
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=3.4e-33 Score=253.70 Aligned_cols=252 Identities=32% Similarity=0.511 Sum_probs=218.9
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.+++. +++++.+.|.+.+++|+||++++++|+.|+..+.+.+.....|.++|+|++|+|+++|+.++.|++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 58999988774 99999999999999999999999999999999887664334577999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccc-----eEEcC
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS-----VAKID 164 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~iP 164 (291)
+|+..++.+|++|..|..++.+.|+.+.. .|. ...|+|++|+.++.+. ++++|
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~~g~~~~~v~v~~~~~~~~~~~~lP 137 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKK---FGN-------------------LYDGGFAEYVRVPAWAVKRGGVLKLP 137 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCcce---ecc-------------------CCCCcceeeEEecccccccccEEECC
Confidence 99999999999999999999999987643 111 1234999999999998 99999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
+++++.+++.+ +++.++|+++. ...++++++|+|+|+|.+|++++|+|+.+|+..|+++++++++.++++++|++.++
T Consensus 138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~ 215 (343)
T cd08235 138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI 215 (343)
T ss_pred CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence 99999998776 68889999874 45899999999998899999999999999994488998999999999999998888
Q ss_pred CCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++ .++.+.+.++..+ ++|+||||++....+..++++++++
T Consensus 216 ~~~~--~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~ 258 (343)
T cd08235 216 DAAE--EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG 258 (343)
T ss_pred cCCc--cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC
Confidence 8775 5677777777766 7999999999877789999999987
No 61
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.5e-33 Score=254.53 Aligned_cols=225 Identities=22% Similarity=0.244 Sum_probs=192.2
Q ss_pred eeEEEEecCCC-----CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCC
Q 022865 10 CKAAVAWEPNK-----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 83 (291)
Q Consensus 10 ~~a~~~~~~~~-----~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~ 83 (291)
|||+++.+++. .+++.++|.|.|+++||+||+.++++|++|+..+.|.++. ..+|.++|||++|+|+++|+.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 68999998874 4788899999999999999999999999999998886543 35789999999999999999998
Q ss_pred C-CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEE
Q 022865 84 E-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (291)
Q Consensus 84 ~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (291)
+ |++||+|+.... .+ |+|++|+.++.+.+++
T Consensus 81 ~~~~vGd~V~~~~~------------------------------~~------------------g~~a~~~~v~~~~~~~ 112 (324)
T cd08291 81 AQSLIGKRVAFLAG------------------------------SY------------------GTYAEYAVADAQQCLP 112 (324)
T ss_pred ccCCCCCEEEecCC------------------------------CC------------------CcchheeeecHHHeEE
Confidence 6 999999974321 01 3899999999999999
Q ss_pred cCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEE--cCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF--GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 163 iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~--G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|+++++++++.+++.+.|+|. +...... ++++++|+ |+|++|++++|+|+++|+ +|++++++++++++++++|+
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~ 189 (324)
T cd08291 113 LPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA 189 (324)
T ss_pred CCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence 9999999999988888899975 4455555 45566665 459999999999999999 89999999999999999999
Q ss_pred CEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 241 ~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++++++. .++.+.+++++.+ ++|++||++|+.. ...++++++++
T Consensus 190 ~~~i~~~~--~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~ 235 (324)
T cd08291 190 EYVLNSSD--PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG 235 (324)
T ss_pred cEEEECCC--ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC
Confidence 99998765 5677788888776 8999999999865 67789999888
No 62
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.2e-33 Score=254.27 Aligned_cols=253 Identities=34% Similarity=0.529 Sum_probs=212.4
Q ss_pred EEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC-C--CCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 12 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-P--EGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 12 a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~-~--~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|+++.+.. .+++++.+.|.+.++||+||+.++++|+.|+..+.+.. . ...+|.++|+|++|+|+++|+++++|++|
T Consensus 1 ~~~~~~~~-~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPG-DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCC-ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 45677774 49999999999999999999999999999988764321 1 11357789999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|++.+..+|++|.+|..+..++|++.... +.... .|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------~g~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA---ATPPV------------------DGTLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc---ccccC------------------CCceeeeEEecHHHcEECcCCCC
Confidence 9999988899999999999999999875321 10001 24999999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
+.+++.+ .++.++++++ ....++++++++|.|+|.+|++++|+|+.+|+.+|+++.+++++.++++++|++.++++++
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9998876 5788898875 7888999999999988999999999999999955899989999999999999999988765
Q ss_pred CCc-hHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 249 HDK-PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 249 ~~~-~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
... .+.+.+.+.+++ ++|++|||+|....+..++++++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~ 258 (343)
T cd05285 217 EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG 258 (343)
T ss_pred ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC
Confidence 211 136667777766 7999999999876799999999988
No 63
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=4.6e-33 Score=251.07 Aligned_cols=248 Identities=36% Similarity=0.594 Sum_probs=216.0
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++..+++++.++++|.|.+.+++|+||++++++|++|+..+.+..+....|.++|||++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 68999987666799999999999999999999999999999999888766556788999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|+......|+.|.+|..+..++|.+.. ..|.. . .|.|++|+.++...++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~------------------~g~~~~~~~v~~~~~~~ip~~~~~ 138 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRA---EYGEE-V------------------DGGFAEYVKVPERSLVKLPDNVSD 138 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCcc---ccccc-c------------------CCeeeeEEEechhheEECCCCCCH
Confidence 9999988899999999999999999752 23322 2 348999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
++++.+++++.++|+++.. ..+.++++++|+|+ |.+|++++++++.+|+ +|+++.+++++.+.+++++.+.+++.++
T Consensus 139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (332)
T cd08259 139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK 216 (332)
T ss_pred HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence 9999999999999998766 88899999999987 9999999999999999 8888888889999998889877775432
Q ss_pred CCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 249 ~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+.+.+.. ++|++|+++|... ...++++++++
T Consensus 217 ----~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~ 249 (332)
T cd08259 217 ----FSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG 249 (332)
T ss_pred ----HHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC
Confidence 445555543 7999999999865 88889999877
No 64
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=3.7e-33 Score=251.67 Aligned_cols=244 Identities=29% Similarity=0.412 Sum_probs=207.2
Q ss_pred eeEEEEecCC-CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
||++++..++ +.+++++.+.|+++++||+||+.++++|++|+..+.+. ....+|.++|||++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 6888887665 45888888888899999999999999999999887642 222457889999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|++.+..+|+.|.+|..++.++|.++.. .|+. ..|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~ 137 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVV-------------------SNGGYAEYIVVPEKNLFKIPDSIS 137 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCccce---eecc-------------------CCCceeeEEEcCHHHceeCCCCCC
Confidence 999999888999999999999999997543 2221 234899999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
+++++.+++.+.++|+++.. .+++++++++|+|+ |++|++++++|+++|+ +|+++. +.++++++|++++++.+
T Consensus 138 ~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~----~~~~~~~~g~~~~~~~~ 211 (325)
T cd08264 138 DELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVS----RKDWLKEFGADEVVDYD 211 (325)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEe----HHHHHHHhCCCeeecch
Confidence 99999999999999998744 88999999999998 9999999999999999 777775 23666789998888764
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+ ..+.+.+++ +++|+|+|++|. ..+..++++|+++
T Consensus 212 ~----~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~ 246 (325)
T cd08264 212 E----VEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG 246 (325)
T ss_pred H----HHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC
Confidence 3 244556665 689999999998 4699999999998
No 65
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=5.7e-33 Score=252.16 Aligned_cols=242 Identities=24% Similarity=0.408 Sum_probs=202.6
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC-----------CCCCCcccccceeEEEEEe
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-----------EGLFPCILGHEAAGIVESV 78 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~Vv~~ 78 (291)
|||+++..+ ++++++++.|++.++||+||+.++++|+.|+..+.+... ...+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 689998866 699999999999999999999999999999998877321 2235788999999999999
Q ss_pred CCCCCC-CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc
Q 022865 79 GEGVTE-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (291)
Q Consensus 79 G~~~~~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 157 (291)
|+++++ |++||+|+..+...|+.|..|..+... ...|+|++|+.++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~--------------------------------~~~g~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP--------------------------------EAPGGYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc--------------------------------CCCCceeeeEEech
Confidence 999987 999999999999999999999332100 01238999999999
Q ss_pred cceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
+.++++|+++++++++ ++.+++++|++ ....+++++++|||+|+|.+|.+++|+|+.+|+..++++++++++.+++++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999998876 56688899987 477889999999999889999999999999999678889889999999999
Q ss_pred cCCCEEeCCCCCCc--hHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 238 FGVTEFVNPKDHDK--PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 238 ~ga~~~i~~~~~~~--~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+|++.+++++.... .+. .+.....+ ++|++||++|+...+..++++++++
T Consensus 205 ~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~ 257 (341)
T cd08262 205 MGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG 257 (341)
T ss_pred cCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC
Confidence 99988888765211 222 34444444 8999999999866688899999887
No 66
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.1e-32 Score=250.18 Aligned_cols=253 Identities=32% Similarity=0.492 Sum_probs=219.9
Q ss_pred eeEEEEecCC-CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
|||+++..++ ..+++++++.|.|.++|++||+.++++|++|+.++.+..+. ...|.++|||++|+|+++|++++.|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7899998776 45999999999999999999999999999999988776543 245678999999999999999999999
Q ss_pred CCEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 88 GDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 88 Gd~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
||+|+..+. ..|+.|.+|..++.++|++... .|+. . .|+|++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~s~~~~~~~~~~~lp~~ 138 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYT-V------------------DGTFAEYAIADARYVTPIPDG 138 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCccc---cccc-c------------------CCcceeEEEeccccEEECCCC
Confidence 999998764 6799999999999999987533 2221 1 248999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++.+++.+++.+.|||+++.. ..+++++++||+|+ +.+|++++++|+++|+ +|+++.+++++.++++++|++.+++
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 216 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD 216 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence 9999999999999999998654 58899999999988 6799999999999999 8999999999999999999999888
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++. .++.+.+.+++++ ++|++||+.+....+..++++++++
T Consensus 217 ~~~--~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~ 258 (341)
T cd08297 217 FKK--SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG 258 (341)
T ss_pred CCC--ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC
Confidence 765 3577777877765 8999999888778899999999887
No 67
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=7.4e-33 Score=249.14 Aligned_cols=238 Identities=26% Similarity=0.443 Sum_probs=202.9
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.+++ ++++++++.|.+.++||+||+.++++|++|+.++.+..+ +|.++|||++|+|+++|+. +++||
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGL-DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCC-cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 6899999875 599999999999999999999999999999999887654 5789999999999999987 68999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|...+..+|+.|.+|..+..+.|..... .+....+ |+|++|+.++.+.++++|++++.
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------------------g~~~~~~~v~~~~~~~lP~~~~~ 132 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRD------------------GAFAEYLTLPLENLHVVPDLVPD 132 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCC------------------CceEEEEEechHHeEECcCCCCH
Confidence 99999988999999999999888886543 2211112 49999999999999999999998
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
++++.+ .+..++|. +.+..+++++++|||+|+|.+|++++|+|+.+|+ +|++++.+++++++++++|++.+++++..
T Consensus 133 ~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~ 209 (319)
T cd08242 133 EQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEAE 209 (319)
T ss_pred HHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcccc
Confidence 888764 34556665 4477889999999999889999999999999999 69999999999999999999887776431
Q ss_pred CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
..++++|++|||+|+...+..++++++++
T Consensus 210 ----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~ 238 (319)
T cd08242 210 ----------SEGGGFDVVVEATGSPSGLELALRLVRPR 238 (319)
T ss_pred ----------ccCCCCCEEEECCCChHHHHHHHHHhhcC
Confidence 12238999999999877899999999887
No 68
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.2e-32 Score=248.65 Aligned_cols=244 Identities=29% Similarity=0.442 Sum_probs=214.0
Q ss_pred eeEEEEecCCC----CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 022865 10 CKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 85 (291)
Q Consensus 10 ~~a~~~~~~~~----~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~ 85 (291)
||++++.+++. ++++.+.+.|.+.++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|+.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 68999998883 58888888888999999999999999999999988876555668899999999999999999999
Q ss_pred CCCCEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 86 QPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 86 ~~Gd~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
++||+|++.+- .+|++|.+|..+++++|+.... .|+. .+ |.|++|+.++.+.++++|
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp 138 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYT-VD------------------GGYAEYMVADERFAYPIP 138 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccc-cC------------------CceEEEEEecchhEEECC
Confidence 99999987554 5789999999999999997754 2222 12 389999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
+++++.+++.+.+++.|+|+++ ...+++++++++|+|+|++|+++++++++.|+ +|+++..++++++.++++|++.++
T Consensus 139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 216 (329)
T cd08298 139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG 216 (329)
T ss_pred CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence 9999999999999999999987 88899999999999999999999999999998 899999999999999999998877
Q ss_pred CCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+.. ..+++|+++++.+....++.++++++++
T Consensus 217 ~~~~~-----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~ 249 (329)
T cd08298 217 DSDDL-----------PPEPLDAAIIFAPVGALVPAALRAVKKG 249 (329)
T ss_pred ccCcc-----------CCCcccEEEEcCCcHHHHHHHHHHhhcC
Confidence 76531 1237999999987777899999999988
No 69
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1.4e-32 Score=249.84 Aligned_cols=250 Identities=32% Similarity=0.521 Sum_probs=216.3
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.+.+. +.+++.+.|++.++||+||+.++++|+.|+....+.+. ...|.++|+|++|+|+++|+.++.|++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 68999998865 99999999999999999999999999999988877652 24578899999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|+..+...|+.|.+|..+....|+.... .|. ...|+|++|+.++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~~g~~~~~~~~~~~~~~~lP~~~~~ 136 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGS-------------------RRDGAFAEYVSVPARNLIKIPDHVDY 136 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcce---Eec-------------------ccCCcccceEEechHHeEECcCCCCH
Confidence 99999888999999999999888886532 111 12349999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
++++.+ ..+.++|+++. ...++++++|+|+|+|.+|.+++|+|+.+|+.+|+++++++++.++++++|++.+++++.
T Consensus 137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~- 213 (343)
T cd08236 137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE- 213 (343)
T ss_pred HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc-
Confidence 998887 57889999874 778899999999988999999999999999954999988999999999999988888765
Q ss_pred CchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.. .+.+.+..++ ++|++|||+|....+..++++|+++
T Consensus 214 -~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~ 251 (343)
T cd08236 214 -ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG 251 (343)
T ss_pred -cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC
Confidence 33 5566666665 7999999999877899999999988
No 70
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=2e-33 Score=248.85 Aligned_cols=203 Identities=28% Similarity=0.443 Sum_probs=171.7
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCc
Q 022865 66 ILGHEAAGIVESVGEGVT------EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 139 (291)
Q Consensus 66 ~~G~e~~G~Vv~~G~~~~------~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~ 139 (291)
++|||++|+|+++|+.++ +|++||||++.+..+|+.|.+|+.++.+.|++... .|....++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~~---------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALDS---------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCcccccC----------
Confidence 589999999999999998 89999999999999999999999999999987543 22110000
Q ss_pred eecccCCcceeeeEEeccc-ceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC
Q 022865 140 IYHFMGTSTFSQYTVVHDV-SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG 218 (291)
Q Consensus 140 ~~~~~~~g~~~~~~~~~~~-~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g 218 (291)
.....|+|+||+.++.+ .++++|++++++.++.+.+...|+|+++ +.....++++|||+|+|++|++++|+||++|
T Consensus 68 --~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 68 --GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred --CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 00112499999999987 7999999999999999998999999976 4455669999999999999999999999999
Q ss_pred CCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 219 ASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 219 ~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+|++++.+++|+++++++|++.+++.+. ..+.+.+++++ ++|++||++|.+..++.++++++++
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~ 211 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG 211 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC
Confidence 966999999999999999999998887643 23456666666 8999999999988899999999998
No 71
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=9.7e-33 Score=248.41 Aligned_cols=225 Identities=24% Similarity=0.311 Sum_probs=197.3
Q ss_pred eeEEEEecCCCC---eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC-CCCCCcccccceeEEEEEeCCCCCCC
Q 022865 10 CKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEV 85 (291)
Q Consensus 10 ~~a~~~~~~~~~---~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~~~~~ 85 (291)
|||+++.+++.+ +++++++.|.+.++||+||+.++++|++|+..+.|.++ ...+|.++|||++|+|+++|+++++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 689999877653 78899999999999999999999999999999888654 23568899999999999999999999
Q ss_pred CCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCC
Q 022865 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (291)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 165 (291)
++||+|+.... .|+|++|+.++...++++|+
T Consensus 81 ~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~ip~ 111 (324)
T cd08292 81 QVGQRVAVAPV-------------------------------------------------HGTWAEYFVAPADGLVPLPD 111 (324)
T ss_pred CCCCEEEeccC-------------------------------------------------CCcceeEEEEchHHeEECCC
Confidence 99999974421 13899999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
++++++++.+++.+.++|+++ ....++++++|||+|+ |.+|++++|+|+++|+ +++++..++++.+.++++|++.++
T Consensus 112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (324)
T cd08292 112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV 189 (324)
T ss_pred CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence 999999999988889999876 5578999999999987 9999999999999999 788888888888888889998888
Q ss_pred CCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+..+ .++.+.+.+++++ ++|+||||+|+. .+..++++++++
T Consensus 190 ~~~~--~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~ 231 (324)
T cd08292 190 STEQ--PGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLGEG 231 (324)
T ss_pred cCCC--chHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhcCC
Confidence 7765 5677788888877 999999999985 578999999888
No 72
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.2e-32 Score=245.17 Aligned_cols=252 Identities=31% Similarity=0.539 Sum_probs=214.1
Q ss_pred eeEEEEecCC-CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
||++++.+++ +.+++++++.|.+.+++|+||+.++++|++|+..+.+.+.....|.++|+|++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 5788888755 359999999999999999999999999999998888776444567899999999999999999999999
Q ss_pred CEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 89 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 89 d~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
|+|+.... .+|+.|.+|..+..+.|+.... .|+. ..|+|++|+.++.+.++++|+++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~~~v~~~~~~~lp~~~ 138 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKG---IGTQ-------------------ADGGFAEYVLVPEESLHELPENL 138 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCce---eeec-------------------CCCceEEEEEcchHHeEECcCCC
Confidence 99998875 6899999999999999986432 2211 12499999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE--cCChhhHHHHHhcCCCEEeC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI--DIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~--~~~~~~~~~~~~~ga~~~i~ 245 (291)
++++++ +.....++|+++.....++++++|||.|+|.+|.+++|+|+++|+ +|+.+ ++++++.++++++|++++ +
T Consensus 139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~ 215 (306)
T cd08258 139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N 215 (306)
T ss_pred CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence 999887 666888999988888889999999998889999999999999999 67765 345668888899999877 6
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.. .++.+.+.++..+ ++|++||++|....+..++++|+++
T Consensus 216 ~~~--~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~ 257 (306)
T cd08258 216 GGE--EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG 257 (306)
T ss_pred CCc--CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC
Confidence 654 5677777777765 8999999998777899999999988
No 73
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1.1e-32 Score=250.71 Aligned_cols=213 Identities=20% Similarity=0.272 Sum_probs=179.4
Q ss_pred eEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCC---CCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCC
Q 022865 22 LVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGK---DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQA 97 (291)
Q Consensus 22 ~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~---~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~ 97 (291)
+++++.+.|.| .++||||||+++|||+.|+..+... ....++|.++|||++|+|+++|+.+++|++||+|+...
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-- 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence 88999999987 4999999999999999986433211 11235678999999999999999999999999997321
Q ss_pred CCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhh----hh
Q 022865 98 ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK----VC 173 (291)
Q Consensus 98 ~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~----aa 173 (291)
+.|++|+.++.+.++++|+++++.+ ++
T Consensus 101 -------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a 131 (345)
T cd08293 101 -------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131 (345)
T ss_pred -------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhh
Confidence 1799999999999999999864432 44
Q ss_pred hhcccchhhhhhhhhhcCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCCCCC
Q 022865 174 LLGCGVPTGLGAVWNTAKVEPG--SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDH 249 (291)
Q Consensus 174 ~l~~~~~ta~~~~~~~~~~~~g--~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~ 249 (291)
.+++++.|+|+++.+..+++++ ++|||+|+ |++|++++|+|+++|+.+|+++++++++.+++++ +|++.++++.+
T Consensus 132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~- 210 (345)
T cd08293 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT- 210 (345)
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-
Confidence 5677899999988777788876 99999987 9999999999999998679999999999998876 99999998765
Q ss_pred CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++.+.+++++++++|++||++|+.. +..++++|+++
T Consensus 211 -~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~ 247 (345)
T cd08293 211 -DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN 247 (345)
T ss_pred -CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC
Confidence 56777788877668999999999865 79999999998
No 74
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2.8e-32 Score=247.89 Aligned_cols=251 Identities=32% Similarity=0.472 Sum_probs=210.6
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
||++++..++..+++.+.+.|.|.++|++||+.++++|+.|+.++.+.. ....+|.++|||++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 6889999888779999999999999999999999999999988754421 1224567899999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..+.++|+.|.+|..+..++|... .. .|. ...|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~-------------------~~~g~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNT-KI--LGV-------------------DTDGCFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCccc-ce--Eec-------------------cCCCcceEEEEechHHcEECcCC
Confidence 999999998899999999999999999753 21 111 11348999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
++++.+ +++..+.++++++. ...+++++|+|.|+|.+|++++|+|+++|+.+|++++++++|.++++++|+++++++
T Consensus 139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 998554 55567788887653 455789999998889999999999999998668888889999999999999888876
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+. .++. .+.++.++ ++|++|||+|....+..++++|+++
T Consensus 216 ~~--~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~ 255 (341)
T cd05281 216 RE--EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG 255 (341)
T ss_pred cc--ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC
Confidence 54 4555 67776665 8999999999888889999999987
No 75
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=5.3e-32 Score=244.35 Aligned_cols=253 Identities=28% Similarity=0.418 Sum_probs=215.7
Q ss_pred eeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++...+. .+++.+.+.|.+.+++|+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++|+.+..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 68898884433 3777788888889999999999999999999988876542 25678999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|++.+..+|+.|.+|..++.+.|+.... .|.. . .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~-~------------------~g~~~~~~~~~~~~~~~~p~~ 138 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEH-V------------------DGGYAEYVAVPARNLLPIPDN 138 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc---cccc-c------------------CcceeEEEEechHHceeCCCC
Confidence 99999999999999999999999999997532 2211 1 248999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++.+++.+++++.++|+++.....+.++++++|+|+ +.+|++++++++.+|+ +|+.+++++++++.+++++.+..++
T Consensus 139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 217 (342)
T cd08266 139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID 217 (342)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence 9999999998899999998877888999999999988 7999999999999999 7899989999999998888877776
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
... .++.+.+.+.+.+ ++|++++++|.. .+..++++++++
T Consensus 218 ~~~--~~~~~~~~~~~~~~~~d~~i~~~g~~-~~~~~~~~l~~~ 258 (342)
T cd08266 218 YRK--EDFVREVRELTGKRGVDVVVEHVGAA-TWEKSLKSLARG 258 (342)
T ss_pred cCC--hHHHHHHHHHhCCCCCcEEEECCcHH-HHHHHHHHhhcC
Confidence 543 4555666666655 899999999985 488899999888
No 76
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=7e-32 Score=244.10 Aligned_cols=250 Identities=32% Similarity=0.487 Sum_probs=213.4
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.+++. +++.+.+.|++.++||+||++++++|+.|+....|..+. .+|.++|+|++|+|+++|+.+++|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 68999998874 999999999999999999999999999999988887653 3778999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|+..+...|+.|.+|..+..+.|..... +|.. . .|+|++|+.++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~v~~~~~~~lP~~~~~ 136 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVT-R------------------NGGFAEYVVVPAKQVYKIPDNLSF 136 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCcce---eccC-C------------------CCcceeEEEecHHHcEECcCCCCH
Confidence 99998888899999999998888887642 2111 1 248999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
.+++.+ .++.++++++ ...+++++++|+|+|+|.+|.+++++|+++|+.+|+++++++++.++++++|++.+++++.
T Consensus 137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 213 (334)
T cd08234 137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR- 213 (334)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC-
Confidence 988766 6778888877 7788999999999988999999999999999955888999999999999999988887765
Q ss_pred CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++... +...++++|++||++|....+..++++|+++
T Consensus 214 -~~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~ 250 (334)
T cd08234 214 -EDPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG 250 (334)
T ss_pred -CCHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC
Confidence 233333 3233348999999999877899999999987
No 77
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=1.2e-31 Score=242.23 Aligned_cols=248 Identities=31% Similarity=0.466 Sum_probs=213.1
Q ss_pred eEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 022865 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 90 (291)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~ 90 (291)
||+++.++|..+++++.+.|.+.+++++||+.++++|++|+..+.+......+|.++|||++|+|+++|+++++|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 68899988767999999999999999999999999999999998887654456889999999999999999999999999
Q ss_pred EeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 91 VIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 91 V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
|++.+. ..|++|.+|..+..+.|++.... +.. . .|+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~------------------~g~~~~~~~v~~~~~~~~p~~~~~ 138 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT---GYT-T------------------QGGYAEYMVADAEYTVLLPDGLPL 138 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCcccc---Ccc-c------------------CCccccEEEEcHHHeEECCCCCCH
Confidence 987554 56999999999999999985431 111 1 248999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
.+++.+.+.+.++|+++.. ..+.++++|+|+|+|.+|++++++|+.+|+ +|++++++++++++++++|++.+++...
T Consensus 139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 215 (330)
T cd08245 139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA- 215 (330)
T ss_pred HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC-
Confidence 9999999999999998744 788999999999888899999999999999 8999999999999999999988887654
Q ss_pred CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
...... ..+++|++||+++....+..++++++.+
T Consensus 216 -~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~ 249 (330)
T cd08245 216 -ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG 249 (330)
T ss_pred -cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC
Confidence 222111 2247999999999878899999999887
No 78
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=3.4e-32 Score=230.96 Aligned_cols=233 Identities=24% Similarity=0.349 Sum_probs=194.0
Q ss_pred CcccceeEEEEecCCCC---eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCC-CCCcccccceeEEEEEeCC
Q 022865 5 GQVITCKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGE 80 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~ 80 (291)
..+...|+++++..|+| ++++++++|.+..++|+||.+|+.|||+|+..++|.++.. ++|.+-|+|++|+|+.+|+
T Consensus 15 q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs 94 (354)
T KOG0025|consen 15 QMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGS 94 (354)
T ss_pred ccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecC
Confidence 45688999999998886 7788999998877779999999999999999999999755 7899999999999999999
Q ss_pred CCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccce
Q 022865 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 160 (291)
Q Consensus 81 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 160 (291)
.++.|++||+|+.... +.|+|++|...+.+.+
T Consensus 95 ~vkgfk~Gd~VIp~~a------------------------------------------------~lGtW~t~~v~~e~~L 126 (354)
T KOG0025|consen 95 NVKGFKPGDWVIPLSA------------------------------------------------NLGTWRTEAVFSESDL 126 (354)
T ss_pred CcCccCCCCeEeecCC------------------------------------------------CCccceeeEeecccce
Confidence 9999999999986643 2349999999999999
Q ss_pred EEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH----H
Q 022865 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----A 235 (291)
Q Consensus 161 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~----~ 235 (291)
+++++.++++.||.+.++..|||+.+....++++|++|+-.|+ +.+|.+.+|+||++|+ +.+.+.++....+. +
T Consensus 127 i~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~L 205 (354)
T KOG0025|consen 127 IKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQL 205 (354)
T ss_pred EEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 9999999999999999 45555466544433 3
Q ss_pred HhcCCCEEeCCCCC-CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 236 KNFGVTEFVNPKDH-DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 236 ~~~ga~~~i~~~~~-~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.+||++++-..+. +.++..... .+....+.|||+|+.+ .....+.|.+||
T Consensus 206 k~lGA~~ViTeeel~~~~~~k~~~--~~~~prLalNcVGGks-a~~iar~L~~Gg 257 (354)
T KOG0025|consen 206 KSLGATEVITEEELRDRKMKKFKG--DNPRPRLALNCVGGKS-ATEIARYLERGG 257 (354)
T ss_pred HHcCCceEecHHHhcchhhhhhhc--cCCCceEEEeccCchh-HHHHHHHHhcCc
Confidence 56999999864331 112211111 1237899999999977 566777788873
No 79
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=7.7e-32 Score=244.02 Aligned_cols=230 Identities=21% Similarity=0.283 Sum_probs=195.3
Q ss_pred eEEEEecC---CC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 022865 11 KAAVAWEP---NK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 85 (291)
Q Consensus 11 ~a~~~~~~---~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~ 85 (291)
||+++..+ +. .+++.++|.|+|+++||+||++++++|+.|+.++.+..+...+|.++|+|++|+|+++|+.++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 46666665 33 38888999999999999999999999999999887765544568899999999999999999999
Q ss_pred CCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCC
Q 022865 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (291)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 165 (291)
++||+|+.... ....|+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~----------------------------------------------~~~~g~~~~~~~v~~~~~~~ip~ 114 (336)
T TIGR02817 81 KPGDEVWYAGD----------------------------------------------IDRPGSNAEFHLVDERIVGHKPK 114 (336)
T ss_pred CCCCEEEEcCC----------------------------------------------CCCCCcccceEEEcHHHcccCCC
Confidence 99999974311 00123899999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCC-----CCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhc
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNF 238 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~-----g~~vlI~G~-g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ 238 (291)
++++++++.+++++.|+|+++....++++ +++|||+|+ |.+|++++|+|+.+ |+ +|+++.+++++.++++++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~ 193 (336)
T TIGR02817 115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL 193 (336)
T ss_pred CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence 99999999999999999998877788776 999999987 99999999999998 98 899998999999999999
Q ss_pred CCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 239 ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
|+++++++.. ++.+.+.+..++++|+++|++++...+..++++++++ |+
T Consensus 194 g~~~~~~~~~---~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~ 242 (336)
T TIGR02817 194 GAHHVIDHSK---PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GR 242 (336)
T ss_pred CCCEEEECCC---CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CE
Confidence 9999887543 4556666654448999999988777799999999888 53
No 80
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=1.8e-31 Score=242.11 Aligned_cols=249 Identities=29% Similarity=0.483 Sum_probs=203.7
Q ss_pred EEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhc-CCCC--CCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 022865 14 VAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDP--EGLFPCILGHEAAGIVESVGEGVTEVQPGDH 90 (291)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~ 90 (291)
++++.+. +++++.+.|.++++||+||+.++++|++|+.... +... ...+|.++|+|++|+|+++|+.+++|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4556654 9999999999999999999999999999988763 3221 1245778999999999999999999999999
Q ss_pred EeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChh
Q 022865 91 VIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLD 170 (291)
Q Consensus 91 V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~ 170 (291)
|+..+...|++|.+|..|..+.|..... ++....+ ....|+|++|+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~--------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~ 143 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAMRF--------------PHVQGGFREYLVVDASQCVPLPDGLSLR 143 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc---eeecccc--------------CCCCCceeeEEEechHHeEECcCCCCHH
Confidence 9999989999999999999999997532 1110000 0123499999999999999999999999
Q ss_pred hhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCC
Q 022865 171 KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250 (291)
Q Consensus 171 ~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~ 250 (291)
+++. ..++.++|+++...... ++++|||.|+|.+|.+++|+|+.+|+.+|+++++++++.++++++|++++++++.
T Consensus 144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~-- 219 (339)
T cd08232 144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR-- 219 (339)
T ss_pred Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--
Confidence 8875 56888999887555555 8999999888999999999999999867899989999999999999988888764
Q ss_pred chHHHHHHhhc-C-CCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 251 KPIQQVLVDLT-D-GGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 251 ~~~~~~v~~~~-~-gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++ .++. . +++|++||++|....+..++++|+++
T Consensus 220 ~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~ 255 (339)
T cd08232 220 DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG 255 (339)
T ss_pred hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC
Confidence 222 2222 2 26999999999877799999999988
No 81
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.6e-31 Score=241.13 Aligned_cols=218 Identities=22% Similarity=0.258 Sum_probs=185.2
Q ss_pred ceeEEEEecC--CC----CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCC
Q 022865 9 TCKAAVAWEP--NK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82 (291)
Q Consensus 9 ~~~a~~~~~~--~~----~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~ 82 (291)
+||++++..+ +. .+++++++.|.|+++||||||++++||+.|..+... ...+|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 6899999883 33 388999999999999999999999999987653221 124688999999999995 34
Q ss_pred CCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc---c
Q 022865 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV---S 159 (291)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~ 159 (291)
+.|++||+|+.. +.|++|+.++.+ .
T Consensus 76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~ 103 (329)
T cd08294 76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD 103 (329)
T ss_pred CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence 579999999732 168899999999 9
Q ss_pred eEEcCCCCCh-----hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 022865 160 VAKIDPQAPL-----DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233 (291)
Q Consensus 160 ~~~iP~~~~~-----~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~ 233 (291)
++++|++++. ..++.+++++.|+|+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus 104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~ 182 (329)
T cd08294 104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA 182 (329)
T ss_pred eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 9999999871 2234677899999999878888999999999986 9999999999999999 8999999999999
Q ss_pred HHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 234 ~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++++|+++++++.+ .++.+.+++++++++|+|||++|+ ..+..++++++++
T Consensus 183 ~l~~~Ga~~vi~~~~--~~~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~ 234 (329)
T cd08294 183 WLKELGFDAVFNYKT--VSLEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF 234 (329)
T ss_pred HHHHcCCCEEEeCCC--ccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC
Confidence 999999999998875 567777777776689999999998 5689999999988
No 82
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=2.3e-31 Score=241.74 Aligned_cols=247 Identities=30% Similarity=0.439 Sum_probs=208.8
Q ss_pred EecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC---CCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 022865 15 AWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV 91 (291)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V 91 (291)
-.++++++++++.|.|.|.++|++||+.++++|+.|+..+.+.. ...++|.++|+|++|+|+++|+++++|++||+|
T Consensus 4 ~~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V 83 (340)
T TIGR00692 4 KTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV 83 (340)
T ss_pred cccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence 34677889999999999999999999999999999998765542 122457789999999999999999999999999
Q ss_pred eecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhh
Q 022865 92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK 171 (291)
Q Consensus 92 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~ 171 (291)
+..+...|+.|-.|..+....|++.+. +|.. ..|+|++|+.++.+.++++|++++++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~ 141 (340)
T TIGR00692 84 SVETHIVCGKCYACRRGQYHVCQNTKI---FGVD-------------------TDGCFAEYAVVPAQNIWKNPKSIPPEY 141 (340)
T ss_pred EECCcCCCCCChhhhCcChhhCcCcce---Eeec-------------------CCCcceeEEEeehHHcEECcCCCChHh
Confidence 999989999999999999999998643 1211 124899999999999999999999865
Q ss_pred hhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCc
Q 022865 172 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 251 (291)
Q Consensus 172 aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~ 251 (291)
+ +++.++.++++++ ....+++++++|.|+|.+|.+++|+|+.+|++.|+++++++++.++++++|++.++++.. .
T Consensus 142 a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~ 216 (340)
T TIGR00692 142 A-TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--E 216 (340)
T ss_pred h-hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--c
Confidence 5 4666888888765 345678999999888999999999999999955888888899999999999988887755 5
Q ss_pred hHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 252 PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 252 ~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++.+.+.++.++ ++|++|||+|....+..++++|+++
T Consensus 217 ~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~ 254 (340)
T TIGR00692 217 DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG 254 (340)
T ss_pred CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC
Confidence 677777777765 8999999999878899999999987
No 83
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.3e-31 Score=243.23 Aligned_cols=227 Identities=26% Similarity=0.342 Sum_probs=189.7
Q ss_pred ccceeEEEEecCCC-CeEEEeeec----CCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccce--eEEEEEe
Q 022865 7 VITCKAAVAWEPNK-PLVIEDVQV----APPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEA--AGIVESV 78 (291)
Q Consensus 7 ~~~~~a~~~~~~~~-~~~~~~~~~----~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~--~G~Vv~~ 78 (291)
...+|++....++. .|++.+.++ |+|+++||||||++++||+.|+..+.|.... ...|+++|++. .|.+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v 84 (338)
T cd08295 5 QVILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVV 84 (338)
T ss_pred EEEEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEE
Confidence 35567777655554 489988877 7899999999999999999999988875432 24678899854 4566667
Q ss_pred CCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc-
Q 022865 79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD- 157 (291)
Q Consensus 79 G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~- 157 (291)
|+.++.|++||+|+.. |+|+||+.++.
T Consensus 85 ~~~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~ 112 (338)
T cd08295 85 DSGNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRG 112 (338)
T ss_pred ecCCCCCCCCCEEEec----------------------------------------------------CCceeEEEecch
Confidence 8888889999999622 27999999999
Q ss_pred cceEEcC-CCCChh-hhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 022865 158 VSVAKID-PQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234 (291)
Q Consensus 158 ~~~~~iP-~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~ 234 (291)
..++++| +++++. +++.+++++.|+|+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+++++.++
T Consensus 113 ~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~ 191 (338)
T cd08295 113 QDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDL 191 (338)
T ss_pred hceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Confidence 7999995 678876 788899999999998878889999999999998 9999999999999999 89998899999999
Q ss_pred HHh-cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 235 AKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 235 ~~~-~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++ +|++.++++.+. .++.+.+.+++++++|++||++|+ ..+..++++++++
T Consensus 192 ~~~~lGa~~vi~~~~~-~~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~ 244 (338)
T cd08295 192 LKNKLGFDDAFNYKEE-PDLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH 244 (338)
T ss_pred HHHhcCCceeEEcCCc-ccHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC
Confidence 998 999999886542 356666777765689999999998 5689999999998
No 84
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.7e-31 Score=241.39 Aligned_cols=229 Identities=22% Similarity=0.296 Sum_probs=187.4
Q ss_pred cccceeEEEEecCCC------CeEEEe---eecCC-CCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCccccc--ceeE
Q 022865 6 QVITCKAAVAWEPNK------PLVIED---VQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH--EAAG 73 (291)
Q Consensus 6 ~~~~~~a~~~~~~~~------~~~~~~---~~~~~-~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~--e~~G 73 (291)
++.+.|.+++....+ .|++++ ++.|. +++||||||+.++++|+.|+..+.+.......|.++|+ |++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G 84 (348)
T PLN03154 5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFG 84 (348)
T ss_pred ccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeE
Confidence 445678888864432 288876 46664 48999999999999999988654332222245889998 8899
Q ss_pred EEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeE
Q 022865 74 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT 153 (291)
Q Consensus 74 ~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~ 153 (291)
+|..+|+.++.|++||+|+.. ++|++|.
T Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey~ 112 (348)
T PLN03154 85 VSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEEYS 112 (348)
T ss_pred EEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEEEE
Confidence 999999999999999999622 2799998
Q ss_pred Eeccc--ceEE--cCCCCChh-hhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 022865 154 VVHDV--SVAK--IDPQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 227 (291)
Q Consensus 154 ~~~~~--~~~~--iP~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~ 227 (291)
.++.+ .+++ +|+++++. +++.+++++.|||+++.....+++|++|||+|+ |++|++++|+||++|+ +|+++++
T Consensus 113 ~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~ 191 (348)
T PLN03154 113 LIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAG 191 (348)
T ss_pred EEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcC
Confidence 88874 3544 48999986 677889999999999877888999999999998 9999999999999999 8999999
Q ss_pred ChhhHHHHH-hcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 228 DPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 228 ~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+++++++++ ++|++.++++++. .++.+.+++.+++++|++||++|+. .+..++++++++|
T Consensus 192 ~~~k~~~~~~~lGa~~vi~~~~~-~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~G 252 (348)
T PLN03154 192 SSQKVDLLKNKLGFDEAFNYKEE-PDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIHG 252 (348)
T ss_pred CHHHHHHHHHhcCCCEEEECCCc-ccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccCC
Confidence 999999987 7999999987641 3566677777666899999999984 6999999999983
No 85
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=3.3e-31 Score=240.43 Aligned_cols=229 Identities=26% Similarity=0.362 Sum_probs=194.9
Q ss_pred eeEEEEecCCCC---eEEEeeecCCCCC-CeEEEEEeeeecchhhhhhhcCCCCCC-C----CCcccccceeEEEEEeCC
Q 022865 10 CKAAVAWEPNKP---LVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSGKDPEG-L----FPCILGHEAAGIVESVGE 80 (291)
Q Consensus 10 ~~a~~~~~~~~~---~~~~~~~~~~~~~-~evlVkv~~~~i~~~D~~~~~g~~~~~-~----~p~~~G~e~~G~Vv~~G~ 80 (291)
|||+++...+.+ +.+++.|.|.|.+ ++|+||+.++++|++|+..+.+..+.. . +|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 789999988775 8999999999887 999999999999999999988765422 2 577999999999999999
Q ss_pred CCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccce
Q 022865 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 160 (291)
Q Consensus 81 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 160 (291)
.+..|++||+|+.... ..|+|++|+.++.+.+
T Consensus 81 ~v~~~~~Gd~V~~~~~------------------------------------------------~~g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP------------------------------------------------GLGTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC------------------------------------------------CCccchheEeccHHHe
Confidence 9999999999984421 0138999999999999
Q ss_pred EEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHH
Q 022865 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRA 235 (291)
Q Consensus 161 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~----~~~~~~ 235 (291)
+++|+++++++++.+++.+.|+|+++.....++++++|||+|+ |.+|++++|+|+++|+ +++++..++ ++++++
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999998877778999999999987 9999999999999999 677766655 678888
Q ss_pred HhcCCCEEeCCCCC-CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 236 KNFGVTEFVNPKDH-DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 236 ~~~ga~~~i~~~~~-~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++|+++++++... ...+...+..+.++++|++|||+|+.. +..++++++++
T Consensus 192 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~ 244 (341)
T cd08290 192 KALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG 244 (341)
T ss_pred HhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC
Confidence 89999998887541 015666677766558999999999865 67789999887
No 86
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=6.1e-31 Score=237.39 Aligned_cols=228 Identities=25% Similarity=0.339 Sum_probs=200.1
Q ss_pred ceeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 9 TCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 9 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
+||++++.++|.+ +++++++.|.|.++||+||+.++++|++|+....+.++...+|.++|||++|+|+++|+.++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 5899999987663 88889999999999999999999999999998887765445688999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+.... . .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~------------------------------~------------------~g~~~~~v~v~~~~~~~lp~~ 112 (327)
T PRK10754 81 VGDRVVYAQS------------------------------A------------------LGAYSSVHNVPADKAAILPDA 112 (327)
T ss_pred CCCEEEECCC------------------------------C------------------CcceeeEEEcCHHHceeCCCC
Confidence 9999973211 0 138999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++++++.+++.+.++|.++....+++++++++|+|+ |.+|++++++|+.+|+ +|++++.+++++++++++|++++++
T Consensus 113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 9999999888899999998777788999999999975 9999999999999999 7899989999999999999988887
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+. .++.+.+++.+++ ++|++|||+|+. .+..++++++++
T Consensus 192 ~~~--~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~ 232 (327)
T PRK10754 192 YRE--ENIVERVKEITGGKKVRVVYDSVGKD-TWEASLDCLQRR 232 (327)
T ss_pred CCC--CcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHHHHhccC
Confidence 664 5677778888876 899999999984 588899999887
No 87
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=6e-31 Score=237.61 Aligned_cols=207 Identities=21% Similarity=0.275 Sum_probs=176.6
Q ss_pred CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCC
Q 022865 21 PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECR 100 (291)
Q Consensus 21 ~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~ 100 (291)
.+++.+.+.|+|++|||||||+++++|+.|+. +.+.....|.++|.|++|+|++.|+ +|++||+|+..
T Consensus 18 ~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------ 85 (325)
T TIGR02825 18 DFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------ 85 (325)
T ss_pred ceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe------
Confidence 38889999999999999999999999997654 3333234578999999999999874 59999999732
Q ss_pred CChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc----CCCCChhhh-hhh
Q 022865 101 ECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI----DPQAPLDKV-CLL 175 (291)
Q Consensus 101 ~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i----P~~~~~~~a-a~l 175 (291)
++|++|+.++.+.+.++ |++++++++ +++
T Consensus 86 ----------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l 119 (325)
T TIGR02825 86 ----------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTV 119 (325)
T ss_pred ----------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhc
Confidence 15889999998888887 899999887 678
Q ss_pred cccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHH
Q 022865 176 GCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQ 254 (291)
Q Consensus 176 ~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~ 254 (291)
++++.|||+++.+..++++|++|||+|+ |++|++++|+||.+|+ +|+++++++++.++++++|++.++++++. ..+.
T Consensus 120 ~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~ 197 (325)
T TIGR02825 120 GMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLE 197 (325)
T ss_pred ccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHH
Confidence 8899999998888899999999999986 9999999999999999 89999999999999999999999988652 2455
Q ss_pred HHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 255 QVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 255 ~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+....++++|++||++|++. +..++++++++
T Consensus 198 ~~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~ 230 (325)
T TIGR02825 198 ETLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF 230 (325)
T ss_pred HHHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC
Confidence 5566665558999999999864 79999999998
No 88
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=1.2e-30 Score=237.41 Aligned_cols=241 Identities=25% Similarity=0.282 Sum_probs=193.7
Q ss_pred eeEEEEecCCCC--eEEEe-eecCCCCCCeEEEEEeeeecchhhhhhhcCCCC--------------------CCCCCcc
Q 022865 10 CKAAVAWEPNKP--LVIED-VQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------------------EGLFPCI 66 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~-~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~--------------------~~~~p~~ 66 (291)
||++++...+.+ +.+.+ ++.|.+.+++|+||+.++++|++|+.++.|.++ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 688888876543 55544 577778999999999999999999998876542 2356889
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCC
Q 022865 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGT 146 (291)
Q Consensus 67 ~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 146 (291)
+|||++|+|+++|+.+++|++||+|+..+..+|++|..|.. |. . .|.. .+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~---~---~~~~-~~------------------ 130 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----ID---Y---IGSE-RD------------------ 130 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----cc---c---cCCC-CC------------------
Confidence 99999999999999999999999999888777777655321 11 0 1100 12
Q ss_pred cceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 022865 147 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225 (291)
Q Consensus 147 g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~ 225 (291)
|+|++|+.++.+.++++|+++++.+++.+++++.|+|+++ ....+++++++||+|+ |.+|++++++|+++|+ +++++
T Consensus 131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 3899999999999999999999999999999999999976 7778999999999998 9999999999999999 68887
Q ss_pred cCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 226 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 226 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
..++ ++++++++|++.+++... ..+.+ ...+.+ ++|++||++|+. .+..++++++++
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~--~~~~~--~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~ 266 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDA--PLLAD--AKALGGEPVDVVADVVGGP-LFPDLLRLLRPG 266 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCC--ccHHH--HHhhCCCCCcEEEecCCHH-HHHHHHHHhccC
Confidence 7665 888889999975554332 23333 444555 899999999985 589999999988
No 89
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.98 E-value=7.5e-31 Score=238.40 Aligned_cols=232 Identities=28% Similarity=0.364 Sum_probs=195.8
Q ss_pred eeEEEEecCC-CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++..++ +.+++++++.|.|+++||+||++++++|++|+....+.. ...+|.++|||++|+|+.+|+.++.|++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 6899999884 448999999999999999999999999999988775544 22356789999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|+......|+ + ....|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~----------------------~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~ 118 (339)
T cd08249 80 DRVAGFVHGGNP----------------------N-------------------DPRNGAFQEYVVADADLTAKIPDNIS 118 (339)
T ss_pred CEEEEEeccccC----------------------C-------------------CCCCCcccceEEechhheEECCCCCC
Confidence 999866432211 0 01124899999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCC----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKV----------EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~----------~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
+.+++.+++.+.++|+++.....+ +++++++|+|+ |.+|++++++|+++|+ +|+.+. ++++++++++
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~ 196 (339)
T cd08249 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS 196 (339)
T ss_pred HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence 999999999999999987655544 78999999997 9999999999999999 787776 5688999999
Q ss_pred cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhc
Q 022865 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287 (291)
Q Consensus 238 ~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~ 287 (291)
+|++.+++... .++.+.+++++++++|++||++|++..+..+++++++
T Consensus 197 ~g~~~v~~~~~--~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~ 244 (339)
T cd08249 197 LGADAVFDYHD--PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGR 244 (339)
T ss_pred cCCCEEEECCC--chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhc
Confidence 99988888765 5677777777666899999999986679999999998
No 90
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.97 E-value=1.3e-29 Score=228.79 Aligned_cols=228 Identities=24% Similarity=0.296 Sum_probs=195.5
Q ss_pred ceeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 022865 9 TCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 85 (291)
Q Consensus 9 ~~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~ 85 (291)
+|||+++...++ .+++.+.+.|.+.++||+||+.++++|+.|+....+..+. ...|.++|||++|+|+++|+.++++
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 689999998876 3667788888889999999999999999999988775532 2456789999999999999999999
Q ss_pred CCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCC
Q 022865 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (291)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 165 (291)
++||+|+.... .|+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~v~~~~~~~ip~ 111 (334)
T PTZ00354 81 KEGDRVMALLP-------------------------------------------------GGGYAEYAVAHKGHVMHIPQ 111 (334)
T ss_pred CCCCEEEEecC-------------------------------------------------CCceeeEEEecHHHcEeCCC
Confidence 99999974311 13899999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
++++..++.+++++.++|+++.....++++++|+|+|+ |.+|++++++|+.+|+ +++.+.++++++++++++|++.++
T Consensus 112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 190 (334)
T PTZ00354 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI 190 (334)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999998877788999999999986 9999999999999999 667788899999999999998888
Q ss_pred CCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.... ..+.+.+.+.+++ ++|++||++|+ ..+..++++++++
T Consensus 191 ~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~ 233 (334)
T PTZ00354 191 RYPDE-EGFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD 233 (334)
T ss_pred ecCCh-hHHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC
Confidence 76541 2266777777765 89999999987 4588999999887
No 91
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=2.6e-29 Score=226.76 Aligned_cols=248 Identities=26% Similarity=0.353 Sum_probs=204.6
Q ss_pred eeEEEEecCC--CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~--~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++...+ +.+++++.+.|.+.++|++||+.++++|++|+....+..+. ...|.++|||++|+|+++|+.+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 7899998664 34888888888899999999999999999999988776532 24678999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+......|..+.+ ..|... . ..|. ...|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~------~~~~~~-~--~~~~-------------------~~~g~~~~~~~~~~~~~~~lp~~ 132 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPP------TAEDEA-S--ALGG-------------------PIDGVLAEYVVLPEEGLVRAPDH 132 (336)
T ss_pred CCCEEEEecccccccccc------cccccc-c--cccc-------------------ccCceeeeEEEecHHHeEECCCC
Confidence 999999876655543322 222211 0 0111 11348999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++.+++.+.+.+.++|+++.....++++++++|+|+|++|++++++++++|+ +|++++.+++++++++++|++.+++.
T Consensus 133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 211 (336)
T cd08276 133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY 211 (336)
T ss_pred CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence 99999999999999999988777889999999999889999999999999999 79999999999999999999888876
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.. ..++.+.+.+++++ ++|++||+++. ..+..+++++++.
T Consensus 212 ~~-~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~ 252 (336)
T cd08276 212 RT-TPDWGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG 252 (336)
T ss_pred Cc-ccCHHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC
Confidence 53 14566778888776 89999999986 4588999999987
No 92
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.97 E-value=2.1e-29 Score=226.61 Aligned_cols=227 Identities=27% Similarity=0.349 Sum_probs=193.4
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
|||+++..++.+ +++.+.+.|.+.++||+||+.++++|++|+....|..+ ...+|.++|||++|+|+++|+.++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 689999876543 66677777778999999999999999999998877543 2356788999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
+++||+|+..... . .|+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~~-----------------------------~------------------~g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTGR-----------------------------A------------------GGGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccCC-----------------------------C------------------CceeeEEEEEchHHeEeCC
Confidence 9999999854210 1 2389999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
+++++.+++.+++.+.|+|. +.....++++++++|+|+ |.+|++++++|+.+|+ +|+++++++++.++++++|++.+
T Consensus 114 ~~~~~~~a~~~~~~~~ta~~-~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHHH-HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 99999999999999999964 667788999999999986 9999999999999999 79999999999999999999888
Q ss_pred eCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 244 i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++.. .++.+.+.++.++ ++|+++|++|+.. ...++++++..
T Consensus 192 ~~~~~--~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~ 234 (324)
T cd08244 192 VDYTR--PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG 234 (324)
T ss_pred EecCC--ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC
Confidence 87654 4566777777766 8999999999875 68899999887
No 93
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.97 E-value=1.4e-29 Score=221.41 Aligned_cols=223 Identities=34% Similarity=0.510 Sum_probs=190.7
Q ss_pred eEEEEEeeeecchhhhhhhcCCCC-CCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCC
Q 022865 36 EVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG 114 (291)
Q Consensus 36 evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~ 114 (291)
||+||++++++|+.|+..+.+..+ ...+|.++|||++|+|+++|+.++.|++||+|+......|+.|..|.. .|+
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 689999999999999999888764 345678999999999999999999999999999999999999999997 565
Q ss_pred CccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCC
Q 022865 115 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP 194 (291)
Q Consensus 115 ~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~ 194 (291)
.... .+ ....|+|++|+.++.+.++++|+++++++++.+++++.++|+++.....+.+
T Consensus 77 ~~~~---~~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 134 (271)
T cd05188 77 GGGI---LG-------------------EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP 134 (271)
T ss_pred CCCE---ec-------------------cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence 4432 11 1123489999999999999999999999999999999999998877777789
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g 273 (291)
+++|||+|++++|++++++++.+|. +|+++++++++.++++++|++.+++... .++.+.+. ...+ ++|++||+++
T Consensus 135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~-~~~~~~~d~vi~~~~ 210 (271)
T cd05188 135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELR-LTGGGGADVVIDAVG 210 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc--CCHHHHHH-HhcCCCCCEEEECCC
Confidence 9999999986699999999999997 8999999999999999999888887665 34444444 4444 8999999999
Q ss_pred ChHHHHHHHHHhhcc
Q 022865 274 NVSVMRAALECCHKV 288 (291)
Q Consensus 274 ~~~~~~~~~~~l~~~ 288 (291)
....+..++++++++
T Consensus 211 ~~~~~~~~~~~l~~~ 225 (271)
T cd05188 211 GPETLAQALRLLRPG 225 (271)
T ss_pred CHHHHHHHHHhcccC
Confidence 866689999999987
No 94
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.97 E-value=1.9e-29 Score=227.69 Aligned_cols=224 Identities=26% Similarity=0.297 Sum_probs=192.7
Q ss_pred ceeEEEEecCCC----CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCC
Q 022865 9 TCKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 83 (291)
Q Consensus 9 ~~~a~~~~~~~~----~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~ 83 (291)
.|||+++..++. ++++++++.|.+.++|++||+.++++|+.|+....+.... ..+|.++|||++|+|+.+|+.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 489999997654 5899999999999999999999999999999988776543 36788999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc
Q 022865 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (291)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 163 (291)
++++||+|+... .|+|++|+.++.+.++++
T Consensus 81 ~~~~Gd~V~~~~--------------------------------------------------~g~~~s~~~v~~~~~~~i 110 (329)
T cd08250 81 DFKVGDAVATMS--------------------------------------------------FGAFAEYQVVPARHAVPV 110 (329)
T ss_pred CCCCCCEEEEec--------------------------------------------------CcceeEEEEechHHeEEC
Confidence 999999997431 138999999999999999
Q ss_pred CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
|++. .+++.+++++.++|+++.+...+.++++++|+|+ |.+|++++++|+.+|+ +|+++.+++++.++++++|++.
T Consensus 111 p~~~--~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 187 (329)
T cd08250 111 PELK--PEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR 187 (329)
T ss_pred CCCc--chhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence 9973 4667788899999998877788999999999986 9999999999999999 7899889999999999999988
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++... .++.+.+.+..++++|++||++|+ ..+..++++++++
T Consensus 188 v~~~~~--~~~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~ 230 (329)
T cd08250 188 PINYKT--EDLGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK 230 (329)
T ss_pred EEeCCC--ccHHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC
Confidence 877654 445556666554589999999997 5689999999887
No 95
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.97 E-value=2.9e-29 Score=227.07 Aligned_cols=229 Identities=22% Similarity=0.251 Sum_probs=194.4
Q ss_pred eeEEEEecCCCC-----eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 022865 10 CKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 10 ~~a~~~~~~~~~-----~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
|||+++.++++. +..++++.|.+.+++++||+.++++|++|+..+.+..+..++|.++|||++|+|+++|+.+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 579999988763 666678888889999999999999999999988776553456778999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||+|+...... .+ |+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~~~----------------------------~~------------------g~~~~~~~v~~~~~~~ip 114 (336)
T cd08252 81 FKVGDEVYYAGDIT----------------------------RP------------------GSNAEYQLVDERIVGHKP 114 (336)
T ss_pred CCCCCEEEEcCCCC----------------------------CC------------------ccceEEEEEchHHeeeCC
Confidence 99999997432100 12 389999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCC-----CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~-----g~~vlI~G~-g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~ 237 (291)
+++++++++.+++.+.++|.++.+...+.+ +++|+|+|+ |.+|++++++|+.+| + +|+++++++++.+++++
T Consensus 115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~ 193 (336)
T cd08252 115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE 193 (336)
T ss_pred CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence 999999999999999999998777777777 999999986 999999999999999 7 89999999999999999
Q ss_pred cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 238 ~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+|++.+++.+. ++.+.+.....+++|++||++|....+..++++++++
T Consensus 194 ~g~~~~~~~~~---~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~ 241 (336)
T cd08252 194 LGADHVINHHQ---DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ 241 (336)
T ss_pred cCCcEEEeCCc---cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC
Confidence 99988887653 3445555443348999999999877799999999988
No 96
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.97 E-value=1.9e-29 Score=229.54 Aligned_cols=226 Identities=23% Similarity=0.302 Sum_probs=189.0
Q ss_pred eeEEEEecCCCC---eEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCC---------------CCCCCcccccc
Q 022865 10 CKAAVAWEPNKP---LVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDP---------------EGLFPCILGHE 70 (291)
Q Consensus 10 ~~a~~~~~~~~~---~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~---------------~~~~p~~~G~e 70 (291)
|||+++..++++ +++++++.|.| .++||+||++++++|++|+..+.+... ...+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 688998887775 88999999999 499999999999999999998877421 23568899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCccee
Q 022865 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS 150 (291)
Q Consensus 71 ~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~ 150 (291)
++|+|+++|+.+++|++||+|+..... +..|+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence 999999999999999999999854320 1124899
Q ss_pred eeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCC----CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 022865 151 QYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP----GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225 (291)
Q Consensus 151 ~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~----g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~ 225 (291)
+|+.++.+.++++|+++++..++.+++.+.++|+++.....+.+ +++++|+|+ |.+|++++++|+++|+ +|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 99999999999999999999999999999999998767666654 999999986 9999999999999999 78877
Q ss_pred cCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 226 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 226 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++ ++.++++++|++.+++... .++.+.+... +++|++||++|.+ .+..++++++++
T Consensus 194 ~~~-~~~~~~~~~g~~~~~~~~~--~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~ 250 (350)
T cd08248 194 CST-DAIPLVKSLGADDVIDYNN--EDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG 250 (350)
T ss_pred eCc-chHHHHHHhCCceEEECCC--hhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC
Confidence 654 6788889999988887654 3444444332 3799999999987 689999999988
No 97
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.97 E-value=4.7e-29 Score=224.40 Aligned_cols=229 Identities=21% Similarity=0.246 Sum_probs=187.3
Q ss_pred eeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++..+++ +++++++|.|.+.++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++ .++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 68999998875 6999999999999999999999999999999988876532 245789999999999999 456799
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+.... ..|+ ...|+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~------------------------~~g~-------------------~~~g~~~~~~~v~~~~~~~lp~~ 115 (325)
T cd05280 79 EGDEVLVTGY------------------------DLGM-------------------NTDGGFAEYVRVPADWVVPLPEG 115 (325)
T ss_pred CCCEEEEccc------------------------ccCC-------------------CCCceeEEEEEEchhhEEECCCC
Confidence 9999985421 0111 11248999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcC--CC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAK--VE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~--~~-~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
+++.+++.+++.+.++|.++..... +. .+++|+|+|+ |.+|++++++|+.+|+ +|++++++++++++++++|++.
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (325)
T cd05280 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE 194 (325)
T ss_pred CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence 9999999999999999987654433 35 3579999998 9999999999999999 7999999999999999999988
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++.+. . ..........+++|+|||++|.. .+..+++++++.
T Consensus 195 ~~~~~~--~-~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~ 236 (325)
T cd05280 195 VLDRED--L-LDESKKPLLKARWAGAIDTVGGD-VLANLLKQTKYG 236 (325)
T ss_pred EEcchh--H-HHHHHHHhcCCCccEEEECCchH-HHHHHHHhhcCC
Confidence 887643 1 11222223334799999999985 589999999887
No 98
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.97 E-value=4.9e-29 Score=224.63 Aligned_cols=229 Identities=18% Similarity=0.214 Sum_probs=186.0
Q ss_pred eeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC-CCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++...++ .+++++.+.|.|.++||+||+.++++|++|.....+.. ....+|.++|||++|+|++.| ++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 78999998776 38889999999999999999999999999987664321 122458899999999999964 46799
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..... .|.. .+ |+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~ 115 (326)
T cd08289 79 PGDEVIVTSYD------------------------LGVS-HH------------------GGYSEYARVPAEWVVPLPKG 115 (326)
T ss_pred CCCEEEEcccc------------------------cCCC-CC------------------CcceeEEEEcHHHeEECCCC
Confidence 99999854310 1110 12 38999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhh--cC-CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNT--AK-VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~--~~-~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
+++++++.+++.+.|+|.++... .. ..++++|+|+|+ |.+|++++|+|+++|+ +|++++++++++++++++|++.
T Consensus 116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (326)
T cd08289 116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE 194 (326)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence 99999999999999998876432 22 335789999998 9999999999999999 8999999999999999999988
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++.++ . ..+.+.++.++++|+|||++|+ ..+..++++++++
T Consensus 195 v~~~~~--~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~ 236 (326)
T cd08289 195 VIPREE--L-QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG 236 (326)
T ss_pred EEcchh--H-HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC
Confidence 887654 2 2344555544489999999998 5689999999988
No 99
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=5.6e-29 Score=222.96 Aligned_cols=228 Identities=27% Similarity=0.405 Sum_probs=192.5
Q ss_pred eeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
||++++...+. .+++.+.+.|.+.++|++||++++++|+.|+..+.+..+....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 57888887664 367778888888999999999999999999999888765456688999999999999995 57999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+..... .+. ...|+|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~-------------------~~~g~~~~~~~~~~~~~~~ip~~~ 115 (320)
T cd08243 79 GQRVATAMGG------------------------MGR-------------------TFDGSYAEYTLVPNEQVYAIDSDL 115 (320)
T ss_pred CCEEEEecCC------------------------CCC-------------------CCCcccceEEEcCHHHcEeCCCCC
Confidence 9999865320 000 012389999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
++++++.+++++.++|+++.....++++++|+|+|+ |.+|++++|+|+++|+ +|+++..++++.+.++++|++.++..
T Consensus 116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 194 (320)
T cd08243 116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194 (320)
T ss_pred CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence 999999999999999998877778999999999997 9999999999999999 79999899999999999999887653
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
. .++.+.+.++ +.++|++||++|+ ..+..++++++++
T Consensus 195 -~--~~~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~ 231 (320)
T cd08243 195 -D--GAIAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG 231 (320)
T ss_pred -C--ccHHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC
Confidence 2 3566667777 4589999999998 4689999999987
No 100
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=2.5e-29 Score=227.08 Aligned_cols=215 Identities=30% Similarity=0.448 Sum_probs=177.7
Q ss_pred eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCC----CCCcccccceeEEEEEeCCCC----CCCCCCCEEee
Q 022865 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG----LFPCILGHEAAGIVESVGEGV----TEVQPGDHVIP 93 (291)
Q Consensus 22 ~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~----~~p~~~G~e~~G~Vv~~G~~~----~~~~~Gd~V~~ 93 (291)
...++.+.|.|.++|++|++.++++|+.|+.+..+.+.+. .+|.+++.++.|++...++.. ..+..|+.+..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 4457889999999999999999999999999999987554 377666666666644433322 22444444431
Q ss_pred cCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhh
Q 022865 94 CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC 173 (291)
Q Consensus 94 ~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa 173 (291)
+...|+|+||+.+|...++++|+++++.+++
T Consensus 100 -------------------------------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 -------------------------------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred -------------------------------------------------ccCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 2333599999999999999999999999999
Q ss_pred hhcccchhhhhhhhhhc------CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 174 LLGCGVPTGLGAVWNTA------KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 174 ~l~~~~~ta~~~~~~~~------~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++.++.|||.++.... ++++|++|||+|+ |++|++++|+|++.++ ..+++.++++++++++++|++++++|
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999999 8999999999976 9999999999999996 45555599999999999999999999
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++ +++.+.+.+.+.++||+||||+|++ ....++.++...|
T Consensus 210 ~~--~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~g 249 (347)
T KOG1198|consen 210 KD--ENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKGG 249 (347)
T ss_pred CC--HHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccCC
Confidence 98 7888899988855999999999996 4677777776663
No 101
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.97 E-value=9.6e-29 Score=222.20 Aligned_cols=214 Identities=22% Similarity=0.343 Sum_probs=188.1
Q ss_pred eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCC
Q 022865 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECR 100 (291)
Q Consensus 22 ~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~ 100 (291)
+++++.+.|.+.+++|+||++++++|+.|+..+.+.... ..+|.++|||++|+|+++|+.++++++||+|+..+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 667788888899999999999999999999988776532 346789999999999999999999999999985421
Q ss_pred CChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcccch
Q 022865 101 ECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180 (291)
Q Consensus 101 ~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ 180 (291)
+ |+|++|+.++.+.++++|+++++.+++.+++.+.
T Consensus 90 ---------------------------~------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ 124 (323)
T cd05282 90 ---------------------------E------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL 124 (323)
T ss_pred ---------------------------C------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence 1 3899999999999999999999999999999999
Q ss_pred hhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHh
Q 022865 181 TGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 181 ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~ 259 (291)
++|+++.....+.++++|+|+|+ |.+|++++++|+++|+ +++++.+++++++.++++|++++++++. .++.+.+.+
T Consensus 125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~ 201 (323)
T cd05282 125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKE 201 (323)
T ss_pred HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHH
Confidence 99998877778899999999987 9999999999999999 7888888899999999999998888765 457777888
Q ss_pred hcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 260 LTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 260 ~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++ ++|++|||+|+.. ...++++++++
T Consensus 202 ~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~ 230 (323)
T cd05282 202 ATGGAGARLALDAVGGES-ATRLARSLRPG 230 (323)
T ss_pred HhcCCCceEEEECCCCHH-HHHHHHhhCCC
Confidence 8776 8999999999966 66889999887
No 102
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.97 E-value=2.7e-28 Score=219.62 Aligned_cols=227 Identities=23% Similarity=0.248 Sum_probs=185.3
Q ss_pred eEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 11 KAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 11 ~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
||+++...+. .++++++|.|.+.++||+||++++++|++|+..+.|..+. ...|.++|||++|+|++ +.+..|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 5778877665 4789999999999999999999999999999988886532 24688999999999998 55678999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+..... .|.. . .|.|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~-~------------------~g~~~~~~~~~~~~~~~iP~~~ 115 (323)
T TIGR02823 79 GDEVIVTGYG------------------------LGVS-H------------------DGGYSQYARVPADWLVPLPEGL 115 (323)
T ss_pred CCEEEEccCC------------------------CCCC-C------------------CccceEEEEEchhheEECCCCC
Confidence 9999855310 0100 1 2389999999999999999999
Q ss_pred Chhhhhhhcccchhhhhhhhhh--cCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNT--AKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~--~~~~~g~-~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
++++++.+++.+.+++.++... ..+.+++ +|+|+|+ |.+|.+++++|+++|+ +++++..+++++++++++|++.+
T Consensus 116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 194 (323)
T TIGR02823 116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV 194 (323)
T ss_pred CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence 9999999998999998765332 3478898 9999998 9999999999999999 78887788888899999999888
Q ss_pred eCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 244 i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++.++ ... .+..+.++++|+++||+|+. .+..++++++++
T Consensus 195 ~~~~~--~~~--~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~ 234 (323)
T TIGR02823 195 IDRED--LSP--PGKPLEKERWAGAVDTVGGH-TLANVLAQLKYG 234 (323)
T ss_pred Ecccc--HHH--HHHHhcCCCceEEEECccHH-HHHHHHHHhCCC
Confidence 87643 222 44455555799999999986 588999999988
No 103
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=1.9e-28 Score=219.29 Aligned_cols=213 Identities=27% Similarity=0.382 Sum_probs=181.0
Q ss_pred CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhh-cCCCCC--CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCC
Q 022865 21 PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDPE--GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQA 97 (291)
Q Consensus 21 ~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~-~g~~~~--~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~ 97 (291)
.+++++++.|.+.++||+||+.++++|++|+..+ .+.... ..+|.++|+|++|+|+++|+.++++++||+|+...
T Consensus 6 ~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 83 (312)
T cd08269 6 RFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS-- 83 (312)
T ss_pred eeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec--
Confidence 3999999999999999999999999999999887 665321 22478999999999999999999999999998442
Q ss_pred CCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcc
Q 022865 98 ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC 177 (291)
Q Consensus 98 ~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~ 177 (291)
.|+|++|+.++.+.++++|+++ ..++.+..
T Consensus 84 ------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~ 113 (312)
T cd08269 84 ------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAFPGE 113 (312)
T ss_pred ------------------------------------------------CCcceeeEEEchhheEECCCch--hhhHHhhh
Confidence 1389999999999999999998 23332236
Q ss_pred cchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHH
Q 022865 178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL 257 (291)
Q Consensus 178 ~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v 257 (291)
++.++++++. ..+++++++++|+|+|.+|.+++++|+.+|+.+|+++.+.+++.++++++|++.+++... .++.+.+
T Consensus 114 ~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~l 190 (312)
T cd08269 114 PLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS--EAIVERV 190 (312)
T ss_pred hHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC--cCHHHHH
Confidence 7788888764 788899999999988999999999999999944999999999999999999988887654 5677778
Q ss_pred HhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 258 VDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 258 ~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+++++ ++|++|||+|....+..++++|+++
T Consensus 191 ~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~ 222 (312)
T cd08269 191 RELTGGAGADVVIEAVGHQWPLDLAGELVAER 222 (312)
T ss_pred HHHcCCCCCCEEEECCCCHHHHHHHHHHhccC
Confidence 887776 8999999999877899999999887
No 104
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.96 E-value=6.7e-28 Score=219.95 Aligned_cols=233 Identities=23% Similarity=0.316 Sum_probs=186.6
Q ss_pred eEEEEecCCCCeEEEeeecCCC---CCCeEEEEEeeeecchhhhhhhcCCCCCC-CCCcccccceeEEEEEeCCCCC-CC
Q 022865 11 KAAVAWEPNKPLVIEDVQVAPP---QAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVT-EV 85 (291)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~~~~---~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~~~~-~~ 85 (291)
|++++.+++.++++++++.|.| ++++|+||+.++++|++|+..+.+..... ..|.++|||++|+|+++|+.++ .|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 6899999988888888877776 89999999999999999998875432221 2377899999999999999998 89
Q ss_pred CCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc----ceE
Q 022865 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV----SVA 161 (291)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~ 161 (291)
++||+|+......+ ...|+|++|+.++.. .++
T Consensus 82 ~~Gd~V~~~~~~~~--------------------------------------------~~~g~~~~~~~v~~~~~~~~~~ 117 (352)
T cd08247 82 KVGDEVCGIYPHPY--------------------------------------------GGQGTLSQYLLVDPKKDKKSIT 117 (352)
T ss_pred CCCCEEEEeecCCC--------------------------------------------CCCceeeEEEEEccccccceeE
Confidence 99999985532110 012489999999987 799
Q ss_pred EcCCCCChhhhhhhcccchhhhhhhhhhc-CCCCCCEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhc
Q 022865 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTA-KVEPGSIVAVFGL-GTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNF 238 (291)
Q Consensus 162 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~-~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~~ 238 (291)
++|+++++.+++.+++.+.|+|+++.... .+++|++++|+|+ +.+|++++++|+++|. +.++.+. ++++.++++++
T Consensus 118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~ 196 (352)
T cd08247 118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKL 196 (352)
T ss_pred ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHh
Confidence 99999999999999999999999876666 7999999999988 8999999999999854 3677775 45556678899
Q ss_pred CCCEEeCCCCCCc--hHHHHHHhhc-CCCccEEEEcCCChHHHHHHHHHhh---cc
Q 022865 239 GVTEFVNPKDHDK--PIQQVLVDLT-DGGVDYSFECIGNVSVMRAALECCH---KV 288 (291)
Q Consensus 239 ga~~~i~~~~~~~--~~~~~v~~~~-~gg~d~v~d~~g~~~~~~~~~~~l~---~~ 288 (291)
|++.+++.++... .+.+.++..+ ++++|++|||+|+...+..++++++ ++
T Consensus 197 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~ 252 (352)
T cd08247 197 GADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN 252 (352)
T ss_pred CCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC
Confidence 9998888655221 2333344444 3489999999999777889999998 77
No 105
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=8.7e-28 Score=215.71 Aligned_cols=228 Identities=27% Similarity=0.390 Sum_probs=195.1
Q ss_pred eeEEEEecCC--CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 10 CKAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 10 ~~a~~~~~~~--~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
|||+++.+++ +.+++++++.|.+.+++++||+.++++|++|+....+.......|.++|||++|+|+.+|+.++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7899999988 46999999999999999999999999999999888776543334778999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+...... . .++|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~----------------------------~------------------~~~~~s~~~~~~~~~~~ip~~~ 114 (325)
T cd08271 81 GDRVAYHASLA----------------------------R------------------GGSFAEYTVVDARAVLPLPDSL 114 (325)
T ss_pred CCEEEeccCCC----------------------------C------------------CccceeEEEeCHHHeEECCCCC
Confidence 99998553200 1 2389999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
++..++.+.+++.++|+++.....++++++++|+|+ +.+|++++++++..|+ +|+.+. ++++.++++++|++.+++.
T Consensus 115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~ 192 (325)
T cd08271 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY 192 (325)
T ss_pred CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence 999999999999999998877788999999999998 8999999999999999 777775 6778888889999888776
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.. ..+.+.+.+..++ ++|++++++++.. ...+++++++.
T Consensus 193 ~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~ 232 (325)
T cd08271 193 ND--EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN 232 (325)
T ss_pred CC--ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC
Confidence 54 4566677777766 8999999999865 56789999887
No 106
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=6.3e-28 Score=215.33 Aligned_cols=213 Identities=21% Similarity=0.223 Sum_probs=179.6
Q ss_pred eeEEEEecCC-CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
||++++.+.+ ..+++++.+.|.+.++|++||+.++++|+.|+.+.... ..|.++|||++|+|+++|+.+..|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~G 76 (305)
T cd08270 1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVG 76 (305)
T ss_pred CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCC
Confidence 5788887754 23777788999999999999999999999999876521 235789999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|+... . .|+|++|+.++.+.++++|++++
T Consensus 77 d~V~~~~-------------------------------~------------------~g~~~~~~~v~~~~~~~ip~~~~ 107 (305)
T cd08270 77 ARVVGLG-------------------------------A------------------MGAWAELVAVPTGWLAVLPDGVS 107 (305)
T ss_pred CEEEEec-------------------------------C------------------CcceeeEEEEchHHeEECCCCCC
Confidence 9997431 0 23899999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
+.+++.+++.+.|+|+++...... ++++++|+|+ |.+|.+++++++.+|+ +|+.++++++++++++++|++..++..
T Consensus 108 ~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 185 (305)
T cd08270 108 FAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGG 185 (305)
T ss_pred HHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecc
Confidence 999999999999999987555544 5999999988 9999999999999999 899998999999999999987655432
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
. ++.++++|+++|++|+. .+..++++++.+
T Consensus 186 ~----------~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~ 215 (305)
T cd08270 186 S----------ELSGAPVDLVVDSVGGP-QLARALELLAPG 215 (305)
T ss_pred c----------cccCCCceEEEECCCcH-HHHHHHHHhcCC
Confidence 1 12234799999999986 588999999988
No 107
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.96 E-value=1.1e-27 Score=214.40 Aligned_cols=231 Identities=28% Similarity=0.397 Sum_probs=196.0
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
||++++..++.+ +.+.+++.|.+.+++|+|++.++++|++|+....+... ...+|.++|||++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 578888766543 88889999999999999999999999999998877553 235788999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+.... |.... .|.+++|+.++.+.++++|++
T Consensus 81 ~Gd~v~~~~~--------------------------~~~~~------------------~g~~~~~~~~~~~~~~~ip~~ 116 (325)
T cd08253 81 VGDRVWLTNL--------------------------GWGRR------------------QGTAAEYVVVPADQLVPLPDG 116 (325)
T ss_pred CCCEEEEecc--------------------------ccCCC------------------CcceeeEEEecHHHcEeCCCC
Confidence 9999986542 00001 238999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++.+++.+++++.++|+++.....+.++++++|+|+ +.+|++++++++.+|+ +|+++++++++.++++++|++.+++
T Consensus 117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (325)
T cd08253 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN 195 (325)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877788999999999987 9999999999999998 8999999999999999999988877
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
... .++.+.+.+++.+ ++|+++|++|... ....+++++..
T Consensus 196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~ 236 (325)
T cd08253 196 YRA--EDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG 236 (325)
T ss_pred CCC--cCHHHHHHHHcCCCceEEEEECCchHH-HHHHHHhhCCC
Confidence 654 4566667776655 8999999999864 77888888877
No 108
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.96 E-value=1.3e-27 Score=213.48 Aligned_cols=226 Identities=27% Similarity=0.353 Sum_probs=193.8
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++...+.+ +++.+.+.|.+.++|++||+.++++|+.|+....+.++. ..+|.++|||++|+|+++|+.+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 689999876543 777788877889999999999999999999888775532 35678999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+.... + |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~-------------------------------~------------------g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 81 VGDRVCALLA-------------------------------G------------------GGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred CCCEEEEecC-------------------------------C------------------CceeEEEEcCHHHhccCCCC
Confidence 9999974321 1 38999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++.+++.++.++.++|.++.+...+.++++++|+|+ |.+|++++++++.+|+ +|+.+++++++++.++++|++.+++
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN 190 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877788999999999997 9999999999999999 7999989999999999999887777
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
... .++.+.+.+...+ ++|++||++|+.. +..++++++++
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~ 231 (323)
T cd05276 191 YRT--EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD 231 (323)
T ss_pred CCc--hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC
Confidence 654 4566667776655 8999999999865 77888888877
No 109
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1.6e-27 Score=213.71 Aligned_cols=229 Identities=27% Similarity=0.390 Sum_probs=194.8
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++..++.+ +++++.+.|.+.+++|+|++.++++|++|+.+..+... ....|.++|||++|+|+++|+.+..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 689999987764 77888888888999999999999999999998877643 123578899999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+.... |.... .|.|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~--------------------------~~~~~------------------~g~~~~~~~v~~~~~~~~p~~ 116 (326)
T cd08272 81 VGDEVYGCAG--------------------------GLGGL------------------QGSLAEYAVVDARLLALKPAN 116 (326)
T ss_pred CCCEEEEccC--------------------------CcCCC------------------CCceeEEEEecHHHcccCCCC
Confidence 9999985431 00001 238999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++..++.+++.+.++|+++.+...++++++++|+|+ |.+|++++++++.+|+ +|+.+++. +++++++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~ 194 (326)
T cd08272 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY 194 (326)
T ss_pred CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence 9999999999899999998878889999999999986 9999999999999999 78888777 8889999999988777
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
... . +.+.+.+++++ ++|+++|++|+. .+..+++++++.
T Consensus 195 ~~~--~-~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~ 234 (326)
T cd08272 195 YRE--T-VVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALY 234 (326)
T ss_pred cch--h-HHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccC
Confidence 654 4 66778887776 899999999985 488899999887
No 110
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.96 E-value=2.6e-27 Score=211.29 Aligned_cols=224 Identities=31% Similarity=0.419 Sum_probs=192.0
Q ss_pred eEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 11 ~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
||+.+..++.. +.+.+.+.+.+.++|++||+.++++|+.|+....+..+. .+|.++|||++|+|+.+|+.+++|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 46666655543 666677777789999999999999999999988776543 457789999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|+... . .|+|++|+.++.+.++++|++++
T Consensus 80 ~~V~~~~-------------------------------~------------------~g~~~~~~~~~~~~~~~~p~~~~ 110 (320)
T cd05286 80 DRVAYAG-------------------------------P------------------PGAYAEYRVVPASRLVKLPDGIS 110 (320)
T ss_pred CEEEEec-------------------------------C------------------CCceeEEEEecHHHceeCCCCCC
Confidence 9997431 0 23899999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
+.+++.+++...++|.++.....+.++++|+|+|+ |.+|++++++++.+|+ +|++++.++++.++++++|++.+++..
T Consensus 111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 189 (320)
T cd05286 111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR 189 (320)
T ss_pred HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence 99999988899999998877788999999999996 9999999999999999 899999999999999999998888765
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
. ..+.+.+.+++.+ ++|++|||+++. .+..++++++++
T Consensus 190 ~--~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~ 228 (320)
T cd05286 190 D--EDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPR 228 (320)
T ss_pred c--hhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccC
Confidence 4 5666777777766 899999999984 688999999887
No 111
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.96 E-value=2.4e-27 Score=213.39 Aligned_cols=228 Identities=18% Similarity=0.216 Sum_probs=184.4
Q ss_pred eeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++..++. .++++++|.|.|+++||+||+.++++|++|+.++.+.... ..+|.++|||++|+|++ +.+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 78999998774 4899999999999999999999999999999988776432 24578899999999999 6677899
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..... .+ ....|+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~-------------------~~~~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08288 79 PGDRVVLTGWG------------------------VG-------------------ERHWGGYAQRARVKADWLVPLPEG 115 (324)
T ss_pred CCCEEEECCcc------------------------CC-------------------CCCCCcceeEEEEchHHeeeCCCC
Confidence 99999854210 00 001248999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhh--hhcCCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 167 APLDKVCLLGCGVPTGLGAVW--NTAKVE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~--~~~~~~-~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
+++++++.+++.+.+++.++. +..... ++++++|+|+ |.+|.+++|+|+.+|+ +|+++..++++.++++++|++.
T Consensus 116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 194 (324)
T cd08288 116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE 194 (324)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999988888886643 123444 5789999998 9999999999999999 7888889999999999999998
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++++ ....+..++.+++|.+||++++. .+..++..++.+
T Consensus 195 ~~~~~~----~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~ 235 (324)
T cd08288 195 IIDRAE----LSEPGRPLQKERWAGAVDTVGGH-TLANVLAQTRYG 235 (324)
T ss_pred EEEcch----hhHhhhhhccCcccEEEECCcHH-HHHHHHHHhcCC
Confidence 888754 22245555555799999999974 466777777665
No 112
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.96 E-value=1.6e-27 Score=204.38 Aligned_cols=211 Identities=25% Similarity=0.322 Sum_probs=177.9
Q ss_pred CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeC--CCCCCCCCCCEEeecCCCC
Q 022865 21 PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVG--EGVTEVQPGDHVIPCYQAE 98 (291)
Q Consensus 21 ~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G--~~~~~~~~Gd~V~~~~~~~ 98 (291)
+|++++.++|.|+++|||||++|.++++.... +....+.--.|+-+|...+|.++... |..+.|++||.|....
T Consensus 26 ~F~lee~~vp~p~~GqvLl~~~ylS~DPymRg-rm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~--- 101 (340)
T COG2130 26 DFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRG-RMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVS--- 101 (340)
T ss_pred CceeEeccCCCCCcCceEEEEEEeccCHHHee-cccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecc---
Confidence 39999999999999999999999999995433 33333333456777776665554443 5678899999997331
Q ss_pred CCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhh--hhhhc
Q 022865 99 CRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK--VCLLG 176 (291)
Q Consensus 99 ~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~--aa~l~ 176 (291)
+|++|..++.+.+.+++++.-+.. ...+.
T Consensus 102 -------------------------------------------------GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLG 132 (340)
T COG2130 102 -------------------------------------------------GWQEYAISDGEGLRKLDPSPAPLSAYLGVLG 132 (340)
T ss_pred -------------------------------------------------cceEEEeechhhceecCCCCCCcchHHhhcC
Confidence 799999999999999986533222 33467
Q ss_pred ccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCCCCCCchHH
Q 022865 177 CGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQ 254 (291)
Q Consensus 177 ~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~ 254 (291)
++..|||.++.+..+.++|++|+|.++ |++|..+.|+||..|+ +|+++..+++|.+++++ +|.|..|||+. +++.
T Consensus 133 mpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~ 209 (340)
T COG2130 133 MPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFA 209 (340)
T ss_pred CchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHH
Confidence 899999999999999999999999987 9999999999999999 99999999999999987 99999999998 6899
Q ss_pred HHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 255 QVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 255 ~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+.+..+.|+|+.||++|++. +...+..|+..
T Consensus 210 ~~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~ 242 (340)
T COG2130 210 QALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF 242 (340)
T ss_pred HHHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc
Confidence 9999999889999999999965 99999998877
No 113
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=3e-27 Score=213.29 Aligned_cols=221 Identities=24% Similarity=0.322 Sum_probs=186.8
Q ss_pred eEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 11 KAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 11 ~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
||+++...+. .+++++.+.|.|.++||+||+.++++|++|+.++.+..+. ..+|.++|||++|+|+++|+.++.|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 6788887665 3888899999999999999999999999999988776543 256889999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+.... . |+|++|+.++.+.++++|+++
T Consensus 82 Gd~V~~~~~-------------------------------~------------------g~~~~~~~~~~~~~~~~p~~~ 112 (331)
T cd08273 82 GDRVAALTR-------------------------------V------------------GGNAEYINLDAKYLVPVPEGV 112 (331)
T ss_pred CCEEEEeCC-------------------------------C------------------cceeeEEEechHHeEECCCCC
Confidence 999974421 1 389999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
++.+++.+++++.++|+++.....+.++++++|+|+ |.+|++++++|+.+|+ +|+.+.. +++.++++++|+.. ++.
T Consensus 113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~ 189 (331)
T cd08273 113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY 189 (331)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence 999999999999999998877788999999999997 9999999999999999 7888877 88899999999754 343
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.. .++.+. +...+++|++||++|+.. +..++++++.+
T Consensus 190 ~~--~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~ 226 (331)
T cd08273 190 RT--KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG 226 (331)
T ss_pred CC--cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC
Confidence 32 233222 333358999999999876 88999999887
No 114
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.95 E-value=1.4e-26 Score=208.95 Aligned_cols=220 Identities=24% Similarity=0.276 Sum_probs=181.5
Q ss_pred eEEEEecCC------CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCC
Q 022865 11 KAAVAWEPN------KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 11 ~a~~~~~~~------~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~ 81 (291)
||+++...+ +.+++++++.|.+.+++|+||+.++++|+.|...+.+... +...+.++|+|++|+|+++|+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~ 82 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP 82 (329)
T ss_pred cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence 455555433 2388999999999999999999999999988765554321 1123467899999999999964
Q ss_pred CCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc-cce
Q 022865 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VSV 160 (291)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~ 160 (291)
+|++||+|+.. ++|++|+.++. +.+
T Consensus 83 --~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~~ 108 (329)
T cd05288 83 --DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASGL 108 (329)
T ss_pred --CCCCCCEEecc----------------------------------------------------cceEEEEEecchhhc
Confidence 79999999722 17999999999 999
Q ss_pred EEcCCCCC--hhhhhh-hcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 161 AKIDPQAP--LDKVCL-LGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 161 ~~iP~~~~--~~~aa~-l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
+++|++++ +..++. +++++.|+|+++.....+.++++|||+|+ |.+|++++++|+.+|+ +|+++++++++.+.++
T Consensus 109 ~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~ 187 (329)
T cd05288 109 RKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLV 187 (329)
T ss_pred EECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99999985 445555 88899999998877788899999999986 9999999999999999 8999989999999998
Q ss_pred h-cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 237 N-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 237 ~-~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+ +|++.++++++ .++.+.+.+.+++++|++|||+|+ ..+..++++++++
T Consensus 188 ~~~g~~~~~~~~~--~~~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~ 237 (329)
T cd05288 188 EELGFDAAINYKT--PDLAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG 237 (329)
T ss_pred hhcCCceEEecCC--hhHHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC
Confidence 8 99988888765 456667777665689999999998 4689999999888
No 115
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=2.9e-26 Score=205.53 Aligned_cols=231 Identities=29% Similarity=0.376 Sum_probs=194.3
Q ss_pred eeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++...+. .+.+.+.+.|.+.+++++|++.++++|+.|+.+..+.... ..+|.++|||++|+|+.+|+.+..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 57888886554 3667788878889999999999999999999887765432 24578899999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..+... ....|++++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~--------------------------------------------~~~~g~~~~~~~~~~~~~~~~p~~ 116 (328)
T cd08268 81 VGDRVSVIPAAD--------------------------------------------LGQYGTYAEYALVPAAAVVKLPDG 116 (328)
T ss_pred CCCEEEeccccc--------------------------------------------cCCCccceEEEEechHhcEeCCCC
Confidence 999998653210 001238999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++..++.+++++.++|.++.....+.++++++|+|+ |.+|++++++++..|+ +++.++.+++++++++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (328)
T cd08268 117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV 195 (328)
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877788899999999987 9999999999999999 8888888999999999899888777
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+. .++.+.+.+.+.+ ++|++|+++|+ .....++++++.+
T Consensus 196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~ 236 (328)
T cd08268 196 TDE--EDLVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG 236 (328)
T ss_pred cCC--ccHHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC
Confidence 654 4566667777665 89999999998 4588889999887
No 116
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.95 E-value=3.4e-26 Score=204.82 Aligned_cols=226 Identities=27% Similarity=0.345 Sum_probs=192.4
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+.+..++.+ +++++.+.+.+.+++++||+.++++|+.|+....+.+.. ..+|.++|||++|+|+.+|+.+.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 578888776554 667777777789999999999999999999888765432 24578999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+.... + |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~-------------------------------~------------------~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 81 VGDRVCALVA-------------------------------G------------------GGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred CCCEEEEccC-------------------------------C------------------CcceeEEEecHHHcEeCCCC
Confidence 9999974311 1 28999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++..++.++++..++|.++.+...++++++++|+|+ |.+|.+++++++.+|+ +|+++.+++++.++++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN 190 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999998778889999999999987 9999999999999999 8889888999999999999877776
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
... .++.+.+.+..++ ++|++++++|.. .+..++++++++
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~ 231 (325)
T TIGR02824 191 YRE--EDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALD 231 (325)
T ss_pred cCc--hhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccC
Confidence 654 4566677777765 899999999975 588899999877
No 117
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.95 E-value=2.2e-26 Score=204.31 Aligned_cols=208 Identities=26% Similarity=0.397 Sum_probs=181.0
Q ss_pred cCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhC
Q 022865 29 VAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKS 107 (291)
Q Consensus 29 ~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~ 107 (291)
.|.+.+++++||+.++++|+.|+..+.+.++. ..+|.++|+|++|+|+++|+.+++|++||+|+.....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 46789999999999999999999988776542 2568899999999999999999999999999854320
Q ss_pred CCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhh
Q 022865 108 GKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187 (291)
Q Consensus 108 ~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~ 187 (291)
.+ |+|++|+.++.+.++++|+++++.+++.+++.+.++|.++
T Consensus 72 -------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l- 113 (303)
T cd08251 72 -------------------SM------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF- 113 (303)
T ss_pred -------------------CC------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence 11 3899999999999999999999999999999999999976
Q ss_pred hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-Cc
Q 022865 188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GV 265 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~ 265 (291)
+..+++++++++|+++ +.+|++++|+++++|+ +|+++++.++++++++++|++.+++... .++...+.+++++ ++
T Consensus 114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~~~~~ 190 (303)
T cd08251 114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLTGGRGV 190 (303)
T ss_pred HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHcCCCCc
Confidence 5788999999999966 9999999999999999 8999989999999999999988887765 4566777777776 89
Q ss_pred cEEEEcCCChHHHHHHHHHhhcc
Q 022865 266 DYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 266 d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
|+++|+++. ..+..+++++++.
T Consensus 191 d~v~~~~~~-~~~~~~~~~l~~~ 212 (303)
T cd08251 191 DVVINTLSG-EAIQKGLNCLAPG 212 (303)
T ss_pred eEEEECCcH-HHHHHHHHHhccC
Confidence 999999976 5688889999887
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.95 E-value=4.4e-26 Score=202.72 Aligned_cols=224 Identities=26% Similarity=0.349 Sum_probs=186.0
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
|||+++..++.. +.+++.+.|.+.++||+||+.++++|+.|+..+.+... ...+|.++|||++|+|+++|+.+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 678888877653 55677777888999999999999999999998877542 2355889999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
+++||+|+...... . .|+|++|+.++.+.++++|
T Consensus 81 ~~~G~~V~~~~~~~----------------------------~------------------~g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPFT----------------------------R------------------GGAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCCC----------------------------C------------------CCcceeEEEecHHHhccCC
Confidence 99999998553200 1 2389999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
+++++..++.+++.+.++|.++.....+.++++++|+|+ |.+|++++++++.+|+ +|+.+..++ +.++++++|++.+
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999888899999998777677899999999997 9999999999999999 788877766 8888889998777
Q ss_pred eCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 244 i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++... .++.+ ...+ ++|++||++|+. ....++++++++
T Consensus 193 ~~~~~--~~~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~ 231 (309)
T cd05289 193 IDYTK--GDFER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG 231 (309)
T ss_pred EeCCC--Cchhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC
Confidence 77654 22322 2333 899999999987 588999999987
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.95 E-value=1.7e-25 Score=199.94 Aligned_cols=225 Identities=32% Similarity=0.465 Sum_probs=190.2
Q ss_pred eeEEEEecCCC--CeEEEeeecCCCC-CCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 022865 10 CKAAVAWEPNK--PLVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 85 (291)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~~~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~ 85 (291)
|+|+++...+. .+++.+.+ |.+. +++++||+.++++|++|+..+.+.... ...|.++|||++|+|+.+|+.+..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 57888875443 37777777 6666 499999999999999999988776532 2346789999999999999999999
Q ss_pred CCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCC
Q 022865 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (291)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 165 (291)
++||+|+.... .|.+++|+.++.+.++++|+
T Consensus 80 ~~G~~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~ 110 (323)
T cd08241 80 KVGDRVVALTG-------------------------------------------------QGGFAEEVVVPAAAVFPLPD 110 (323)
T ss_pred CCCCEEEEecC-------------------------------------------------CceeEEEEEcCHHHceeCCC
Confidence 99999985420 13899999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
++++.+++.+.++..++|.++.....+.++++++|+|+ |.+|++++++++.+|+ .|+.++.++++.++++++|++.++
T Consensus 111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd08241 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI 189 (323)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence 99998888888899999998776788999999999998 9999999999999999 799998999999999999987777
Q ss_pred CCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+... .++.+.+.+.+++ ++|+++|++|. ..+..++++++++
T Consensus 190 ~~~~--~~~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~ 231 (323)
T cd08241 190 DYRD--PDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG 231 (323)
T ss_pred ecCC--ccHHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC
Confidence 6654 4567778887766 89999999998 5588899999887
No 120
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.94 E-value=8.4e-26 Score=198.63 Aligned_cols=198 Identities=25% Similarity=0.327 Sum_probs=174.0
Q ss_pred CeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCC
Q 022865 35 GEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG 114 (291)
Q Consensus 35 ~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~ 114 (291)
+|++||+.++++|++|+....+.. ..+|.++|||++|+|+++|+.++.|++||+|+...
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 589999999999999999887764 24578999999999999999999999999997432
Q ss_pred CccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCC
Q 022865 115 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP 194 (291)
Q Consensus 115 ~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~ 194 (291)
.|+|++|+.++.+.++++|+++++.+++.++++..++|.++.+...+++
T Consensus 60 -------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 108 (293)
T cd05195 60 -------------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK 108 (293)
T ss_pred -------------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence 1389999999999999999999999999998899999998877788999
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC--CCEEeCCCCCCchHHHHHHhhcCC-CccEEEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG--VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFE 270 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g--a~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d 270 (291)
+++++|+|+ |.+|++++++++.+|+ +++++..++++.+++++++ ++.+++... .++.+.+.+++.+ ++|+++|
T Consensus 109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~ 185 (293)
T cd05195 109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD--LSFADGILRATGGRGVDVVLN 185 (293)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc--hhHHHHHHHHhCCCCceEEEe
Confidence 999999975 9999999999999999 8999988889999998888 677776654 4677778887766 8999999
Q ss_pred cCCChHHHHHHHHHhhcc
Q 022865 271 CIGNVSVMRAALECCHKV 288 (291)
Q Consensus 271 ~~g~~~~~~~~~~~l~~~ 288 (291)
++|+. .+..++++++++
T Consensus 186 ~~~~~-~~~~~~~~l~~~ 202 (293)
T cd05195 186 SLSGE-LLRASWRCLAPF 202 (293)
T ss_pred CCCch-HHHHHHHhcccC
Confidence 99987 699999999987
No 121
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=5.8e-25 Score=198.31 Aligned_cols=224 Identities=24% Similarity=0.347 Sum_probs=184.9
Q ss_pred eEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 11 KAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 11 ~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
||+++...+. .+.+.+.+.|.|.+++|+||+.++++|+.|+..+.+.... ...|.++|||++|+|+.+|+.+++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4666665553 3777788878889999999999999999999988776532 245778999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+.... + |+|++|+.++.+.++++|+++
T Consensus 81 G~~V~~~~~-------------------------------~------------------~~~~~~~~~~~~~~~~ip~~~ 111 (337)
T cd08275 81 GDRVMGLTR-------------------------------F------------------GGYAEVVNVPADQVFPLPDGM 111 (337)
T ss_pred CCEEEEecC-------------------------------C------------------CeeeeEEEecHHHeEECCCCC
Confidence 999985421 1 389999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
++.+++.++++..++|+++....+++++++|+|+|+ |.+|++++++|+.+ +. .++.. ..+++.++++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~ 189 (337)
T cd08275 112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVID 189 (337)
T ss_pred CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEee
Confidence 999999999999999998877888999999999998 99999999999999 33 33222 3456788888899988877
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+. ..+.+.+.+.+.+++|+++|++|+. .+..++++++++
T Consensus 190 ~~~--~~~~~~~~~~~~~~~d~v~~~~g~~-~~~~~~~~l~~~ 229 (337)
T cd08275 190 YRT--QDYVEEVKKISPEGVDIVLDALGGE-DTRKSYDLLKPM 229 (337)
T ss_pred CCC--CcHHHHHHHHhCCCceEEEECCcHH-HHHHHHHhhccC
Confidence 664 4566677776655899999999985 478899999887
No 122
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=2.6e-25 Score=199.06 Aligned_cols=213 Identities=26% Similarity=0.354 Sum_probs=173.9
Q ss_pred EEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCC
Q 022865 23 VIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAEC 99 (291)
Q Consensus 23 ~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~ 99 (291)
++++.+.|.|.++||+|+++++++|++|+..+.+..+ ....|..+|||++|+|+++|+.+.++.+||+|+......
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~- 93 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK- 93 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence 7788899999999999999999999999998877652 123567899999999999999999999999998553210
Q ss_pred CCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcccc
Q 022865 100 RECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 179 (291)
Q Consensus 100 ~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~ 179 (291)
.. |.|++|+.++.+.++++|+++++..++.+++++
T Consensus 94 ---------------------------~~------------------g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 94 ---------------------------GG------------------GALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred ---------------------------CC------------------ceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 11 389999999999999999999999999999999
Q ss_pred hhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHH
Q 022865 180 PTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 258 (291)
Q Consensus 180 ~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~ 258 (291)
.++|+++.....++++++++|+|+ |.+|++++++|+.+|+ +|+++..+ ++.++++++|++.+++... .++. .
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~ 201 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---A 201 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---h
Confidence 999998877777999999999997 9999999999999999 78887765 8888889999988877654 2222 3
Q ss_pred hhcCC-CccEEEEcCCCh-HHHHHHHHHhhcc
Q 022865 259 DLTDG-GVDYSFECIGNV-SVMRAALECCHKV 288 (291)
Q Consensus 259 ~~~~g-g~d~v~d~~g~~-~~~~~~~~~l~~~ 288 (291)
..+.+ ++|+++||+|+. ......+..++++
T Consensus 202 ~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~ 233 (319)
T cd08267 202 LTAGGEKYDVIFDAVGNSPFSLYRASLALKPG 233 (319)
T ss_pred hccCCCCCcEEEECCCchHHHHHHhhhccCCC
Confidence 34444 899999999952 2333444346666
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.93 E-value=2.1e-24 Score=189.58 Aligned_cols=193 Identities=25% Similarity=0.378 Sum_probs=168.7
Q ss_pred EEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccC
Q 022865 39 IKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG 118 (291)
Q Consensus 39 Vkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~ 118 (291)
||+.++++|++|+..+.+.++ .|.++|||++|+|+++|+.++.|++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 899999999999998877543 357899999999999999999999999997431
Q ss_pred CCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEE
Q 022865 119 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIV 198 (291)
Q Consensus 119 ~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~v 198 (291)
.|+|++|+.++.+.++++|+++++.+++.+.++..++|.++.+...+.++++|
T Consensus 56 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 108 (288)
T smart00829 56 ---------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV 108 (288)
T ss_pred ---------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence 13899999999999999999999999999999999999987777889999999
Q ss_pred EEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC--CEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCC
Q 022865 199 AVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGN 274 (291)
Q Consensus 199 lI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga--~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~ 274 (291)
+|+|+ |.+|++++++++++|+ +|++++++++++++++++|+ +.+++++. .++.+.+.+..++ ++|+++|++|.
T Consensus 109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~~~ 185 (288)
T smart00829 109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD--LSFADEILRATGGRGVDVVLNSLAG 185 (288)
T ss_pred EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC--ccHHHHHHHHhCCCCcEEEEeCCCH
Confidence 99986 9999999999999999 89999899999999999998 66776654 4566677777665 89999999996
Q ss_pred hHHHHHHHHHhhcc
Q 022865 275 VSVMRAALECCHKV 288 (291)
Q Consensus 275 ~~~~~~~~~~l~~~ 288 (291)
..+..++++++++
T Consensus 186 -~~~~~~~~~l~~~ 198 (288)
T smart00829 186 -EFLDASLRCLAPG 198 (288)
T ss_pred -HHHHHHHHhccCC
Confidence 5688899999887
No 124
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.88 E-value=1.4e-22 Score=154.37 Aligned_cols=108 Identities=37% Similarity=0.691 Sum_probs=93.3
Q ss_pred CCeEEEEEeeeecchhhhhhhcC-CCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCC
Q 022865 34 AGEVRIKILFTALCHTDAYTWSG-KDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNL 112 (291)
Q Consensus 34 ~~evlVkv~~~~i~~~D~~~~~g-~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 112 (291)
|+|||||+++++||++|++++.+ ......+|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|..+..++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 68999999999999999999998 45556899999999999999999999999999999999988899999999999999
Q ss_pred CCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc
Q 022865 113 CGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (291)
Q Consensus 113 ~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 163 (291)
|++... +|+. .+| +|+||+.++.++++++
T Consensus 81 c~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEV---LGLG-LDG------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEE---TTTS-STC------------------SSBSEEEEEGGGEEEE
T ss_pred CCCCCE---eEcC-CCC------------------cccCeEEEehHHEEEC
Confidence 987654 2322 334 9999999999999975
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.87 E-value=4.1e-21 Score=169.29 Aligned_cols=163 Identities=33% Similarity=0.425 Sum_probs=140.6
Q ss_pred CCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCcee
Q 022865 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIY 141 (291)
Q Consensus 62 ~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~ 141 (291)
++|.++|||++|+|+++|+++++|++||+|+...
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~---------------------------------------------- 52 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG---------------------------------------------- 52 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC----------------------------------------------
Confidence 4889999999999999999999999999997331
Q ss_pred cccCCcceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCe
Q 022865 142 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASR 221 (291)
Q Consensus 142 ~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~ 221 (291)
.|++|+.++.+.++++|+++++.+++.+ +++.++|+++ ...+++++++++|+|+|.+|++++++|+++|+.+
T Consensus 53 ------~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~ 124 (277)
T cd08255 53 ------PHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGARE 124 (277)
T ss_pred ------CcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 5899999999999999999999998888 7899999976 4688999999999988999999999999999944
Q ss_pred EEEEcCChhhHHHHHhcC-CCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 222 VIGIDIDPKKFDRAKNFG-VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 222 v~~~~~~~~~~~~~~~~g-a~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
|++++++++++++++++| ++.++.... ..+.+ ++|++||+++....+..++++++++
T Consensus 125 vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~ 183 (277)
T cd08255 125 VVGVDPDAARRELAEALGPADPVAADTA----------DEIGGRGADVVIEASGSPSALETALRLLRDR 183 (277)
T ss_pred EEEECCCHHHHHHHHHcCCCccccccch----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC
Confidence 999999999999999999 444443321 11233 8999999999877899999999988
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.87 E-value=3.2e-20 Score=159.11 Aligned_cols=207 Identities=26% Similarity=0.300 Sum_probs=162.7
Q ss_pred EeeecC-CCCCCeEEEEEeeeecchhhhhhhcCCCCCC-CCCccccc----ceeEEEEEeCCCCCCCCCCCEEeecCCCC
Q 022865 25 EDVQVA-PPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGH----EAAGIVESVGEGVTEVQPGDHVIPCYQAE 98 (291)
Q Consensus 25 ~~~~~~-~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~----e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~ 98 (291)
.+++++ +++++++|||.+|.+..|.....+....+.. -.|+.+|- .++|+|++ |..+++++||.|....
T Consensus 27 ~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~--- 101 (343)
T KOG1196|consen 27 TTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV--- 101 (343)
T ss_pred eeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec---
Confidence 345544 4689999999999999988654433222221 22344433 67999999 5678899999996332
Q ss_pred CCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCC--CCChhhhh-
Q 022865 99 CRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDP--QAPLDKVC- 173 (291)
Q Consensus 99 ~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~--~~~~~~aa- 173 (291)
+|.+|.++++. ..++|+. +.++....
T Consensus 102 -------------------------------------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg 132 (343)
T KOG1196|consen 102 -------------------------------------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLG 132 (343)
T ss_pred -------------------------------------------------cceEEEEecCcchhcccCCCCCccCHhhhhh
Confidence 68999888654 3444433 44444433
Q ss_pred hhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeCCCCCCc
Q 022865 174 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDK 251 (291)
Q Consensus 174 ~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~~~ 251 (291)
++.++.+|||..+.+....++|++|+|-|| |++|.++.|+|+.+|+ +|++...++||.++++ +||.+..+||+++ .
T Consensus 133 ~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e-~ 210 (343)
T KOG1196|consen 133 LLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE-S 210 (343)
T ss_pred ccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCc-c
Confidence 467899999999999999999999999987 9999999999999999 9999999999999997 6799999999983 4
Q ss_pred hHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 252 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 252 ~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+..+++.+..+.|+|+.||.+|+.. +...+..|+..
T Consensus 211 ~~~~aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~ 246 (343)
T KOG1196|consen 211 DLSAALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH 246 (343)
T ss_pred CHHHHHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc
Confidence 7788888888889999999999965 88888888877
No 127
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.82 E-value=1e-19 Score=177.26 Aligned_cols=206 Identities=20% Similarity=0.257 Sum_probs=172.4
Q ss_pred eEEEeeecC---CCCCCeEEEEEeeeecchhhhhhhcCCCCCCCC-------CcccccceeEEEEEeCCCCCCCCCCCEE
Q 022865 22 LVIEDVQVA---PPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF-------PCILGHEAAGIVESVGEGVTEVQPGDHV 91 (291)
Q Consensus 22 ~~~~~~~~~---~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~-------p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V 91 (291)
++..+-+.. +..++.=+.-|.|+.||..|+++.+|+.++... .+++|-|++|+ ..-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 555555544 236777899999999999999999999876533 36889999888 4559999
Q ss_pred eecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhh
Q 022865 92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK 171 (291)
Q Consensus 92 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~ 171 (291)
..... . -.+++.+.++.+++|.+|.+..+++
T Consensus 1499 M~mvp-------------------------------A------------------ksLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMVP-------------------------------A------------------KSLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred EEeee-------------------------------h------------------hhhhhhhhcchhhhhhCCcccchhh
Confidence 64432 1 1688888899999999999999999
Q ss_pred hhhhcccchhhhhhhhhhcCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCCEEeCC
Q 022865 172 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNP 246 (291)
Q Consensus 172 aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~-G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~~~i~~ 246 (291)
|+..++.++|+|+|+..+.+.++|++|||+ |+|++|++||.+|.++|+ +|+.+..+.||++++.+. ....+-|.
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 999999999999999999999999999999 559999999999999999 999999999999998652 22333343
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
+ +.+|-+-+.+.|.| |+|+|+|+...+. ++.+++||+.. ||
T Consensus 1609 R--dtsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-GR 1650 (2376)
T KOG1202|consen 1609 R--DTSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-GR 1650 (2376)
T ss_pred c--cccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-Ce
Confidence 3 47899999999998 9999999999876 99999999999 54
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.46 E-value=2.8e-13 Score=105.91 Aligned_cols=82 Identities=30% Similarity=0.503 Sum_probs=76.8
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHH
Q 022865 205 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE 283 (291)
Q Consensus 205 ~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~ 283 (291)
++|++++|+|+++|+ +|++++++++|+++++++|++.++++++ .++.+.+++++++ ++|+||||+|+...++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999996 9999999999999999999999999887 5689999999988 99999999999899999999
Q ss_pred HhhccC
Q 022865 284 CCHKVS 289 (291)
Q Consensus 284 ~l~~~g 289 (291)
+++++|
T Consensus 78 ~l~~~G 83 (130)
T PF00107_consen 78 LLRPGG 83 (130)
T ss_dssp HEEEEE
T ss_pred HhccCC
Confidence 999983
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.00 E-value=2.6e-09 Score=101.08 Aligned_cols=97 Identities=20% Similarity=0.252 Sum_probs=76.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCC-----------chHHHHHHh
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHD-----------KPIQQVLVD 259 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~-----------~~~~~~v~~ 259 (291)
..++++|+|+|+|.+|+++++.|+.+|+ +|+++|.++++++.++++|++.+ ++..+.+ .++.+...+
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4679999999999999999999999999 89999999999999999999854 5543211 123233333
Q ss_pred h-cC--CCccEEEEcCCC-----hHHH-HHHHHHhhccC
Q 022865 260 L-TD--GGVDYSFECIGN-----VSVM-RAALECCHKVS 289 (291)
Q Consensus 260 ~-~~--gg~d~v~d~~g~-----~~~~-~~~~~~l~~~g 289 (291)
. .. +++|+||+|+|. +.++ +++++.++++|
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGg 279 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGS 279 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCC
Confidence 2 22 379999999996 3364 99999999983
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.64 E-value=2.8e-07 Score=85.38 Aligned_cols=92 Identities=22% Similarity=0.321 Sum_probs=74.1
Q ss_pred hhhhhhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhc
Q 022865 183 LGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 183 ~~~~~~~~~-~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~ 261 (291)
+.++.+..+ .-+|++|+|+|.|++|+.+++.++.+|+ +|++++.++.|++.++++|++.+ + ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v---- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV---- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH----
Confidence 344444444 4689999999999999999999999999 89999999999999999998432 1 11122
Q ss_pred CCCccEEEEcCCChHHHHHH-HHHhhcc
Q 022865 262 DGGVDYSFECIGNVSVMRAA-LECCHKV 288 (291)
Q Consensus 262 ~gg~d~v~d~~g~~~~~~~~-~~~l~~~ 288 (291)
.++|+||+|+|++..+... +++++++
T Consensus 256 -~~aDVVI~atG~~~~i~~~~l~~mk~G 282 (413)
T cd00401 256 -KEGDIFVTTTGNKDIITGEHFEQMKDG 282 (413)
T ss_pred -cCCCEEEECCCCHHHHHHHHHhcCCCC
Confidence 2589999999999988887 8888887
No 131
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.36 E-value=2.5e-06 Score=80.89 Aligned_cols=95 Identities=21% Similarity=0.301 Sum_probs=71.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe-CCCCC-----------CchHHHHHHhh
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDH-----------DKPIQQVLVDL 260 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i-~~~~~-----------~~~~~~~v~~~ 260 (291)
.++.+++|+|+|.+|++++++++.+|+ .|++++.++++++.++++|++.+. +..++ ..++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 457899999999999999999999999 799999999999999999987632 22110 12333333333
Q ss_pred cC---CCccEEEEcC---CChH---HHHHHHHHhhcc
Q 022865 261 TD---GGVDYSFECI---GNVS---VMRAALECCHKV 288 (291)
Q Consensus 261 ~~---gg~d~v~d~~---g~~~---~~~~~~~~l~~~ 288 (291)
.. .++|+||+|+ |.+. ..+..++.++++
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG 277 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG 277 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC
Confidence 32 3799999999 6433 577788888887
No 132
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.12 E-value=2.6e-05 Score=72.64 Aligned_cols=93 Identities=26% Similarity=0.316 Sum_probs=69.9
Q ss_pred hhhhhhhhcCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhh
Q 022865 182 GLGAVWNTAKVE-PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 182 a~~~~~~~~~~~-~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~ 260 (291)
.|.++.+...+. .|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|++ +.+ +.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal--- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA--- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH---
Confidence 345444443444 89999999999999999999999999 899999998887766666653 221 11222
Q ss_pred cCCCccEEEEcCCChHHHH-HHHHHhhcc
Q 022865 261 TDGGVDYSFECIGNVSVMR-AALECCHKV 288 (291)
Q Consensus 261 ~~gg~d~v~d~~g~~~~~~-~~~~~l~~~ 288 (291)
.++|+||+++|+...+. ..++.++++
T Consensus 266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G 292 (425)
T PRK05476 266 --ELGDIFVTATGNKDVITAEHMEAMKDG 292 (425)
T ss_pred --hCCCEEEECCCCHHHHHHHHHhcCCCC
Confidence 26999999999988776 577777776
No 133
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.00 E-value=1.7e-05 Score=71.36 Aligned_cols=109 Identities=20% Similarity=0.202 Sum_probs=78.1
Q ss_pred cceEEcCCCCChhhhhhhcccchhhhhhhhhhcCC---CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH-H
Q 022865 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKV---EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-D 233 (291)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~---~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~-~ 233 (291)
+.++++|+.+..+.+.... +.+.++.++...... .++.+|+|+|+|.+|..+++.++..|..+|++++++.++. +
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 5677778888877776654 566666654322221 3689999999999999999999988877899999998864 7
Q ss_pred HHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHH
Q 022865 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 277 (291)
Q Consensus 234 ~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~ 277 (291)
+++++|+. ++.. .+..+.+. .+|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~----~~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL----DELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH----HHHHHHHh-----cCCEEEECCCCCch
Confidence 77888873 3322 12222221 48999999998765
No 134
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.98 E-value=5.8e-07 Score=84.05 Aligned_cols=161 Identities=17% Similarity=0.183 Sum_probs=100.3
Q ss_pred cccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceeccc
Q 022865 65 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFM 144 (291)
Q Consensus 65 ~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~ 144 (291)
..-|.|.++.+.+|++.++. .|++.+.. |+-|+.| .+.|..... .|.. .++
T Consensus 88 ~~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~-l~~--------------- 138 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKV-LER--------------- 138 (417)
T ss_pred hcCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHH-HHH---------------
Confidence 35688999999999988765 55555555 7777887 233332221 1110 222
Q ss_pred CCcceeeeEEecccceEE---c-CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCC
Q 022865 145 GTSTFSQYTVVHDVSVAK---I-DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS 220 (291)
Q Consensus 145 ~~g~~~~~~~~~~~~~~~---i-P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~ 220 (291)
.|++++.++. .+.. | +..++...++.- .........++++|+|+|+|.+|..+++.++..|+.
T Consensus 139 ---lf~~a~~~~k-~vr~~t~i~~~~vSv~~~Av~---------la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~ 205 (417)
T TIGR01035 139 ---LFQKAFSVGK-RVRTETDISAGAVSISSAAVE---------LAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVG 205 (417)
T ss_pred ---HHHHHHHHhh-hhhhhcCCCCCCcCHHHHHHH---------HHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCC
Confidence 7888888765 3332 3 223333333211 011223335678999999999999999999999976
Q ss_pred eEEEEcCChhhHH-HHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHH
Q 022865 221 RVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 277 (291)
Q Consensus 221 ~v~~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~ 277 (291)
+|++++++.++.+ ++++++.. .+.. .+..+.+ .++|+||+|++.+..
T Consensus 206 ~V~v~~rs~~ra~~la~~~g~~-~i~~----~~l~~~l-----~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 206 KILIANRTYERAEDLAKELGGE-AVKF----EDLEEYL-----AEADIVISSTGAPHP 253 (417)
T ss_pred EEEEEeCCHHHHHHHHHHcCCe-EeeH----HHHHHHH-----hhCCEEEECCCCCCc
Confidence 9999999988754 66777753 2221 1222222 159999999987543
No 135
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=97.98 E-value=6.8e-05 Score=69.43 Aligned_cols=91 Identities=25% Similarity=0.330 Sum_probs=68.8
Q ss_pred hhhhhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcC
Q 022865 184 GAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 184 ~~~~~~~~-~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~ 262 (291)
.++.+..+ ...|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+. +.. ..+.+
T Consensus 183 ~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal----- 248 (406)
T TIGR00936 183 DGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA----- 248 (406)
T ss_pred HHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH-----
Confidence 33434433 3689999999999999999999999999 899999888887777777762 221 11222
Q ss_pred CCccEEEEcCCChHHHHH-HHHHhhcc
Q 022865 263 GGVDYSFECIGNVSVMRA-ALECCHKV 288 (291)
Q Consensus 263 gg~d~v~d~~g~~~~~~~-~~~~l~~~ 288 (291)
.++|+||+++|++..+.. .+..++++
T Consensus 249 ~~aDVVItaTG~~~vI~~~~~~~mK~G 275 (406)
T TIGR00936 249 KIGDIFITATGNKDVIRGEHFENMKDG 275 (406)
T ss_pred hcCCEEEECCCCHHHHHHHHHhcCCCC
Confidence 258999999999888875 77777776
No 136
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.91 E-value=0.00012 Score=65.40 Aligned_cols=84 Identities=24% Similarity=0.324 Sum_probs=64.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
.+++++|+|.|.+|+.+++.++.+|+ +|++++++.++++.++++|+.. +.. . .+.+... .+|+||++++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~-~~~----~----~l~~~l~-~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSP-FHL----S----ELAEEVG-KIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCee-ecH----H----HHHHHhC-CCCEEEECCC
Confidence 57899999999999999999999999 9999999998888888888642 211 1 1222222 5999999998
Q ss_pred ChHHHHHHHHHhhcc
Q 022865 274 NVSVMRAALECCHKV 288 (291)
Q Consensus 274 ~~~~~~~~~~~l~~~ 288 (291)
.....+..++.++++
T Consensus 220 ~~~i~~~~l~~~~~g 234 (296)
T PRK08306 220 ALVLTKEVLSKMPPE 234 (296)
T ss_pred hhhhhHHHHHcCCCC
Confidence 765556666667664
No 137
>PLN02494 adenosylhomocysteinase
Probab=97.88 E-value=0.00011 Score=68.94 Aligned_cols=93 Identities=26% Similarity=0.334 Sum_probs=70.7
Q ss_pred hhhhhhhcCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhc
Q 022865 183 LGAVWNTAKV-EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 183 ~~~~~~~~~~-~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~ 261 (291)
+.++.+..++ -.|++++|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|... + +..+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v-------~leEal~--- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L-------TLEDVVS--- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c-------cHHHHHh---
Confidence 4444454443 579999999999999999999999999 8999999888776777777642 1 1222222
Q ss_pred CCCccEEEEcCCChHHH-HHHHHHhhccC
Q 022865 262 DGGVDYSFECIGNVSVM-RAALECCHKVS 289 (291)
Q Consensus 262 ~gg~d~v~d~~g~~~~~-~~~~~~l~~~g 289 (291)
.+|++++++|+...+ ...++.|++++
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~GA 335 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNNA 335 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCCC
Confidence 489999999988764 88999998873
No 138
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=97.81 E-value=4.5e-05 Score=67.18 Aligned_cols=93 Identities=25% Similarity=0.403 Sum_probs=65.7
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhc----CCCEEeCCCCCCchHHHHHHh--hc
Q 022865 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVD--LT 261 (291)
Q Consensus 189 ~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~-~v~~~~~~~~~~~~~~~~----ga~~~i~~~~~~~~~~~~v~~--~~ 261 (291)
...++++++||.+|+|. |..+.++++..+.. +|+++|.+++.++.+++. +.+.+.... .+ +.+ +.
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d----~~~l~~~ 143 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GE----IEALPVA 143 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cc----hhhCCCC
Confidence 35678999999999988 98888888888753 799999999999888763 322111000 11 222 22
Q ss_pred CCCccEEEEcC------CChHHHHHHHHHhhccCC
Q 022865 262 DGGVDYSFECI------GNVSVMRAALECCHKVSG 290 (291)
Q Consensus 262 ~gg~d~v~d~~------g~~~~~~~~~~~l~~~gg 290 (291)
.+.||+|+... .....++.+.+.|+++ |
T Consensus 144 ~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G 177 (272)
T PRK11873 144 DNSVDVIISNCVINLSPDKERVFKEAFRVLKPG-G 177 (272)
T ss_pred CCceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-c
Confidence 34799888543 3356799999999999 5
No 139
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.78 E-value=0.00027 Score=61.59 Aligned_cols=123 Identities=22% Similarity=0.228 Sum_probs=74.4
Q ss_pred eeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 022865 149 FSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227 (291)
Q Consensus 149 ~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~-~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~ 227 (291)
|.+|.. +...++.+++++++..+.-- .|.. ++... ..+.++++||-+|+|. |.+++.+++ .|..+|+++|.
T Consensus 79 ~~~~~~-~~~~~i~i~p~~afgtg~h~----tt~~-~l~~l~~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 79 WEDPPD-PDEINIELDPGMAFGTGTHP----TTRL-CLEALEKLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CcCCCC-CCeEEEEECCCCccCCCCCH----HHHH-HHHHHHhhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 444544 66788899988876654321 1111 11111 1256889999999987 888876554 67767999999
Q ss_pred ChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC--CccEEEEcCCCh---HHHHHHHHHhhccC
Q 022865 228 DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFECIGNV---SVMRAALECCHKVS 289 (291)
Q Consensus 228 ~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g--g~d~v~d~~g~~---~~~~~~~~~l~~~g 289 (291)
++...+.+++.....-+. + .. ....+ .||+|+...... ..++.+.+.|+++|
T Consensus 151 s~~~l~~A~~n~~~~~~~--~-~~-------~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG 207 (250)
T PRK00517 151 DPQAVEAARENAELNGVE--L-NV-------YLPQGDLKADVIVANILANPLLELAPDLARLLKPGG 207 (250)
T ss_pred CHHHHHHHHHHHHHcCCC--c-eE-------EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCc
Confidence 999888876532110000 0 00 01111 589888765542 34567778888883
No 140
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.75 E-value=0.0012 Score=58.86 Aligned_cols=127 Identities=16% Similarity=0.125 Sum_probs=80.1
Q ss_pred ceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhc---CCCCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeE
Q 022865 148 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA---KVEPGSIVAVFGL-GTVGLAVAEGAK-AAGASRV 222 (291)
Q Consensus 148 ~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~---~~~~g~~vlI~G~-g~vG~~ai~~a~-~~g~~~v 222 (291)
.|-+|..+..+..+. | .....++..-+ .+.|+|. +.+.. ..-..+.|+|.++ +..++..+..++ ..+.-++
T Consensus 90 ~YN~Y~r~~~d~~y~-~-~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYD-P-EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccC-c-chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 456666666554431 1 11122222223 5677775 32222 2334567788877 888988888887 4555489
Q ss_pred EEEcCChhhHHHHHhcCC-CEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhc
Q 022865 223 IGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287 (291)
Q Consensus 223 ~~~~~~~~~~~~~~~~ga-~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~ 287 (291)
|++ ++....++.+.+|. |+++.|++ |.++....--+++|+.|+..+.....+.+.+
T Consensus 166 vgl-TS~~N~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d 222 (314)
T PF11017_consen 166 VGL-TSARNVAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGD 222 (314)
T ss_pred EEE-ecCcchhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhh
Confidence 999 55566678899996 66777764 4444334567999999998877776665543
No 141
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.73 E-value=4.9e-05 Score=73.97 Aligned_cols=81 Identities=26% Similarity=0.343 Sum_probs=59.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---------------------hhhHHHHHhcCCCEEeCCCC-
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID---------------------PKKFDRAKNFGVTEFVNPKD- 248 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~---------------------~~~~~~~~~~ga~~~i~~~~- 248 (291)
...+|++|+|+|+|++|+++++.++.+|+ +|++++.. +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 36789999999999999999999999999 78888743 35677788899876665432
Q ss_pred CCchHHHHHHhhcCCCccEEEEcCCChHH
Q 022865 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSV 277 (291)
Q Consensus 249 ~~~~~~~~v~~~~~gg~d~v~d~~g~~~~ 277 (291)
.+... +.+ ..++|+||+++|....
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~~ 235 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQLG 235 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCCC
Confidence 11111 111 2269999999997543
No 142
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.58 E-value=0.00032 Score=55.17 Aligned_cols=73 Identities=25% Similarity=0.354 Sum_probs=52.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCC--EEeCCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~--~~i~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
++.+++|+|+|+.|.+++..+...|+++|+.+.++.+|.+.+ ++++.. ..+.+.+ +.+.+ ..+|+||+
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVIN 81 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEEE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEEE
Confidence 578999999999999999999999998899999999886655 455332 1333322 11111 15999999
Q ss_pred cCCCh
Q 022865 271 CIGNV 275 (291)
Q Consensus 271 ~~g~~ 275 (291)
|++..
T Consensus 82 aT~~~ 86 (135)
T PF01488_consen 82 ATPSG 86 (135)
T ss_dssp -SSTT
T ss_pred ecCCC
Confidence 98864
No 143
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.57 E-value=0.00038 Score=64.14 Aligned_cols=88 Identities=19% Similarity=0.197 Sum_probs=59.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++++.+. .++........+ . +.+.+... .+|+||+++
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~--~---~~l~~~l~-~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN--A---YEIEDAVK-RADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC--H---HHHHHHHc-cCCEEEEcc
Confidence 34569999999999999999999999 8999999988877664 455432222221 1 12333222 589999998
Q ss_pred C---C--hH-HHHHHHHHhhcc
Q 022865 273 G---N--VS-VMRAALECCHKV 288 (291)
Q Consensus 273 g---~--~~-~~~~~~~~l~~~ 288 (291)
+ . +. ..+..++.++++
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g 260 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPG 260 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCC
Confidence 3 2 22 135666666665
No 144
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.54 E-value=0.00031 Score=58.79 Aligned_cols=95 Identities=19% Similarity=0.223 Sum_probs=71.3
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEEeCCCCCCchHHHHHHhhc
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~v~~~~ 261 (291)
+.....++++++||-+|+|. |+.++-+++..+ +|+.+++.++-.+.+ +.+|...+.....+. ...+.
T Consensus 64 m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG------~~G~~ 134 (209)
T COG2518 64 MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDG------SKGWP 134 (209)
T ss_pred HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCc------ccCCC
Confidence 45778899999999999876 999999999888 899999999855554 457774433222211 11222
Q ss_pred C-CCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 262 D-GGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 262 ~-gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
. +.||.|+-+.+.+..-+..++.|+++|
T Consensus 135 ~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gG 163 (209)
T COG2518 135 EEAPYDRIIVTAAAPEVPEALLDQLKPGG 163 (209)
T ss_pred CCCCcCEEEEeeccCCCCHHHHHhcccCC
Confidence 2 389999999898887889999999993
No 145
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.54 E-value=0.00076 Score=63.46 Aligned_cols=83 Identities=27% Similarity=0.358 Sum_probs=63.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.-.|++++|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|+.. . ++.+.+ ..+|+|+.+
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~-------~leell-----~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V-------TLEDVV-----ETADIFVTA 316 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c-------cHHHHH-----hcCCEEEEC
Confidence 3478999999999999999999999999 8999988877665555556531 1 122222 258999999
Q ss_pred CCChHHHH-HHHHHhhcc
Q 022865 272 IGNVSVMR-AALECCHKV 288 (291)
Q Consensus 272 ~g~~~~~~-~~~~~l~~~ 288 (291)
+|+...+. ..++.|+++
T Consensus 317 tGt~~iI~~e~~~~MKpG 334 (476)
T PTZ00075 317 TGNKDIITLEHMRRMKNN 334 (476)
T ss_pred CCcccccCHHHHhccCCC
Confidence 99888774 788888887
No 146
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.54 E-value=0.00037 Score=65.44 Aligned_cols=90 Identities=19% Similarity=0.208 Sum_probs=62.6
Q ss_pred cchhhhhhhhhhcC---CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCCEEeCCCCCCchH
Q 022865 178 GVPTGLGAVWNTAK---VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPI 253 (291)
Q Consensus 178 ~~~ta~~~~~~~~~---~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~ 253 (291)
+.+.++.++..... -.++++|+|+|+|.+|.++++.++..|+.+|++++++.++.+ +++++|.+ ++.. .+.
T Consensus 162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~----~~~ 236 (423)
T PRK00045 162 AVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL----DEL 236 (423)
T ss_pred CcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH----HHH
Confidence 44555555432222 257789999999999999999999999878999999988854 77778753 3222 112
Q ss_pred HHHHHhhcCCCccEEEEcCCChHH
Q 022865 254 QQVLVDLTDGGVDYSFECIGNVSV 277 (291)
Q Consensus 254 ~~~v~~~~~gg~d~v~d~~g~~~~ 277 (291)
.+.. .++|+||+|+|.+..
T Consensus 237 ----~~~l-~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 237 ----PEAL-AEADIVISSTGAPHP 255 (423)
T ss_pred ----HHHh-ccCCEEEECCCCCCc
Confidence 2211 258999999997543
No 147
>PRK08324 short chain dehydrogenase; Validated
Probab=97.51 E-value=0.00061 Score=67.90 Aligned_cols=113 Identities=24% Similarity=0.302 Sum_probs=72.5
Q ss_pred ceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 022865 148 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID 226 (291)
Q Consensus 148 ~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~ 226 (291)
.+++|..++...++.+ +..+++++.....+ .....+++++||+|+ |++|+..++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5667777777666666 55665665422100 122336789999987 9999999999999999 899999
Q ss_pred CChhhHHHHH-hcCC--C-EE--eCCCCCCchHHHHHHhhc--CCCccEEEEcCC
Q 022865 227 IDPKKFDRAK-NFGV--T-EF--VNPKDHDKPIQQVLVDLT--DGGVDYSFECIG 273 (291)
Q Consensus 227 ~~~~~~~~~~-~~ga--~-~~--i~~~~~~~~~~~~v~~~~--~gg~d~v~d~~g 273 (291)
++.++++.+. +++. . .. .|..+ ..++.+.+.+.. .+++|+||+++|
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 9988766553 3433 1 12 23222 233333343322 247999999998
No 148
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.38 E-value=0.0013 Score=56.31 Aligned_cols=79 Identities=19% Similarity=0.336 Sum_probs=58.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC----CEEeCCCCCCchHHHHHHhhcC--CCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV----TEFVNPKDHDKPIQQVLVDLTD--GGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga----~~~i~~~~~~~~~~~~v~~~~~--gg~ 265 (291)
+++.++|.|+ +++|.+.++.....|+ +|+.+.+..++++.+ .+++. ...+|..+ ..+....+..+.. +.+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence 3478899998 9999999999999999 999999999988766 46773 12334433 2344445554443 379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+.+|..|-
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999999884
No 149
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0022 Score=56.50 Aligned_cols=78 Identities=17% Similarity=0.252 Sum_probs=55.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHh---hcCCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVD---LTDGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~---~~~gg~d~v 268 (291)
.++++||+|+ |.+|...++.+...|+ +|+++++++++++.+.+.+...+ .|..+ ..++.+.+.+ ...+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE-PESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC-HHHHHHHHHHHHHHcCCCccEE
Confidence 3578999988 9999999988888899 89999999888877766555433 23332 2333333333 233579999
Q ss_pred EEcCC
Q 022865 269 FECIG 273 (291)
Q Consensus 269 ~d~~g 273 (291)
|++.|
T Consensus 81 i~~Ag 85 (277)
T PRK05993 81 FNNGA 85 (277)
T ss_pred EECCC
Confidence 99976
No 150
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.29 E-value=0.0016 Score=57.87 Aligned_cols=83 Identities=24% Similarity=0.302 Sum_probs=58.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
.+++++|+|.|.+|..++..++.+|+ +|+++++++++++.+.+++.. .+.. .+ +.+.. ..+|+||++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~-~~~~----~~----l~~~l-~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLI-PFPL----NK----LEEKV-AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-eecH----HH----HHHHh-ccCCEEEECCC
Confidence 47899999999999999999999998 999999998887777666643 1111 11 22222 25899999987
Q ss_pred ChHHHHHHHHHhhc
Q 022865 274 NVSVMRAALECCHK 287 (291)
Q Consensus 274 ~~~~~~~~~~~l~~ 287 (291)
....-...++.+++
T Consensus 219 ~~ii~~~~l~~~k~ 232 (287)
T TIGR02853 219 ALVLTADVLSKLPK 232 (287)
T ss_pred hHHhCHHHHhcCCC
Confidence 54322334454543
No 151
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.28 E-value=0.00095 Score=59.42 Aligned_cols=89 Identities=22% Similarity=0.223 Sum_probs=57.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCCE-EeCCCCCCchHHHHHHhhcCCCcc
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTE-FVNPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~~-~i~~~~~~~~~~~~v~~~~~gg~d 266 (291)
..++++||-+|+|. |.+++.+++ +|..+|+++|.++..++.+++. +... +..... + ......++||
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~---~----~~~~~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI---Y----LEQPIEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---c----cccccCCCce
Confidence 45788999999988 888877665 5777999999999888777653 2211 111110 0 1122234799
Q ss_pred EEEEcCCCh---HHHHHHHHHhhccC
Q 022865 267 YSFECIGNV---SVMRAALECCHKVS 289 (291)
Q Consensus 267 ~v~d~~g~~---~~~~~~~~~l~~~g 289 (291)
+|+...... ..+..+.+.|+++|
T Consensus 228 lVvan~~~~~l~~ll~~~~~~LkpgG 253 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPGG 253 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCCc
Confidence 998765432 44667778888883
No 152
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.27 E-value=0.0024 Score=58.68 Aligned_cols=86 Identities=23% Similarity=0.250 Sum_probs=60.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC---CC-EEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG---VT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g---a~-~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.+|||+|+|.+|+.+++.+.+.+-.+|+..+++.++.+.+.+.. .. ..+|..+ .+.+.++.. ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-----~~al~~li~-~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-----VDALVALIK-DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-----hHHHHHHHh-cCCEEEEe
Confidence 47899999999999999998888559999999999888886653 11 1233332 223333333 35999999
Q ss_pred CCChHHHHHHHHHhhc
Q 022865 272 IGNVSVMRAALECCHK 287 (291)
Q Consensus 272 ~g~~~~~~~~~~~l~~ 287 (291)
.+.......+-.|++.
T Consensus 76 ~p~~~~~~i~ka~i~~ 91 (389)
T COG1748 76 APPFVDLTILKACIKT 91 (389)
T ss_pred CCchhhHHHHHHHHHh
Confidence 9987766554455443
No 153
>PRK04148 hypothetical protein; Provisional
Probab=97.21 E-value=0.0036 Score=48.92 Aligned_cols=52 Identities=33% Similarity=0.526 Sum_probs=41.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
..++.+++++|.| .|...+..+..+|. .|+++|.+++..+.+++.+.+.+.+
T Consensus 14 ~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~d 65 (134)
T PRK04148 14 KGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVD 65 (134)
T ss_pred cccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEEC
Confidence 3456789999999 78766666668898 9999999999999888887655443
No 154
>PRK06182 short chain dehydrogenase; Validated
Probab=97.14 E-value=0.0029 Score=55.49 Aligned_cols=79 Identities=22% Similarity=0.339 Sum_probs=54.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhc--CCCccEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d~v~ 269 (291)
++++++|+|+ |.+|...++.+...|+ +|+++++++++++.+.+.+...+ .|..+ ..++.+.+.+.. .+++|++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence 3578999988 9999999988888899 89999998888765554444322 23322 233434444322 24799999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
++.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99884
No 155
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.003 Score=55.41 Aligned_cols=77 Identities=23% Similarity=0.373 Sum_probs=54.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhc--CCCccEEEEc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSFEC 271 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d~v~d~ 271 (291)
+++||+|+ |.+|...++.+...|+ +|+++++++++++.+.+.+...+ .|..+ ..++.+.+.... .+++|++|++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND-GAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEEEC
Confidence 47899988 9999999998888899 89999998887776665554332 23332 234444444432 2479999999
Q ss_pred CCC
Q 022865 272 IGN 274 (291)
Q Consensus 272 ~g~ 274 (291)
.|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 983
No 156
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.03 E-value=0.0048 Score=51.66 Aligned_cols=96 Identities=23% Similarity=0.385 Sum_probs=65.5
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHH----hcC-CCEEeCCCCCCchHHHHHHhhc
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFG-VTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~----~~g-a~~~i~~~~~~~~~~~~v~~~~ 261 (291)
....+.++++||-+|+|. |.+++++++.++ ..+|+++|.+++.++.++ +++ .+.+..... +..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~---d~~~~l~~~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG---EAPEILFTI- 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe---chhhhHhhc-
Confidence 456778999999999988 999999998875 348999999999887664 355 222221111 122222222
Q ss_pred CCCccEEEEcCCC---hHHHHHHHHHhhcc
Q 022865 262 DGGVDYSFECIGN---VSVMRAALECCHKV 288 (291)
Q Consensus 262 ~gg~d~v~d~~g~---~~~~~~~~~~l~~~ 288 (291)
.+.+|.||...+. ...+..+.+.|+++
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg 138 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG 138 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC
Confidence 2479999986543 45677888889988
No 157
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.02 E-value=0.0057 Score=53.44 Aligned_cols=81 Identities=19% Similarity=0.247 Sum_probs=55.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCCE-EeCCCCCCchHHHHHH-hhcC--
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE-FVNPKDHDKPIQQVLV-DLTD-- 262 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~----~ga~~-~i~~~~~~~~~~~~v~-~~~~-- 262 (291)
..+.++||+|+ +++|...+..+...|+ +++.+.++++|++.+. + .+... ++..+-.+.+-.+.+. ++..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 45789999998 9999998888888899 9999999999987663 2 33222 3322211233333333 3332
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
..+|+.+|++|-
T Consensus 83 ~~IdvLVNNAG~ 94 (265)
T COG0300 83 GPIDVLVNNAGF 94 (265)
T ss_pred CcccEEEECCCc
Confidence 279999999983
No 158
>PRK08017 oxidoreductase; Provisional
Probab=97.02 E-value=0.0054 Score=52.94 Aligned_cols=77 Identities=25% Similarity=0.333 Sum_probs=54.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe-CCCCCCchHHHHHH---hhcCCCccEEEE
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLV---DLTDGGVDYSFE 270 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i-~~~~~~~~~~~~v~---~~~~gg~d~v~d 270 (291)
+++||+|+ |.+|...++.+...|+ +|++++++.++++.+++.++..+. |..+ ..++.+.+. ....+.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD-PESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeEEEE
Confidence 57999998 9999999999988998 899999999888877777764432 3322 222222222 333457899998
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8773
No 159
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.95 E-value=0.0028 Score=51.72 Aligned_cols=47 Identities=34% Similarity=0.423 Sum_probs=40.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
..+|+|+|+|.+|..|+.+++.+|+ +++..+...++++..+..++..
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~ 66 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYF 66 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEE
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCce
Confidence 3689999999999999999999999 8999999999888888777644
No 160
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.95 E-value=0.0072 Score=49.46 Aligned_cols=83 Identities=25% Similarity=0.364 Sum_probs=55.9
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC--
Q 022865 198 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN-- 274 (291)
Q Consensus 198 vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~-- 274 (291)
|+|+|+ |.+|...++.+...|. +|+++.+++++.+. ..+.+ ++..+-.+. +.+.+... ++|.||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~~d~---~~~~~al~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDLFDP---DSVKAALK-GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCTTCH---HHHHHHHT-TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeeehhh---hhhhhhhh-hcchhhhhhhhhc
Confidence 689998 9999999999999997 99999999998776 33443 332222122 23333332 69999999984
Q ss_pred --hHHHHHHHHHhhcc
Q 022865 275 --VSVMRAALECCHKV 288 (291)
Q Consensus 275 --~~~~~~~~~~l~~~ 288 (291)
....+..++.++..
T Consensus 73 ~~~~~~~~~~~a~~~~ 88 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKA 88 (183)
T ss_dssp THHHHHHHHHHHHHHT
T ss_pred cccccccccccccccc
Confidence 23344555555443
No 161
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.94 E-value=0.006 Score=55.06 Aligned_cols=96 Identities=18% Similarity=0.152 Sum_probs=67.2
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhc
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~ 261 (291)
.....++++++||.+|+|. |..++.+++..+. ..|++++.+++.++.+++ .|.+.+..... +..+.+..
T Consensus 73 l~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g---D~~~~~~~-- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG---DGYYGVPE-- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC---Chhhcccc--
Confidence 3556778999999999974 9999999998763 369999999987766643 56543322221 11111111
Q ss_pred CCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 262 DGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 262 ~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+.+|+|+.+.+.+......++.|+++
T Consensus 147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg 173 (322)
T PRK13943 147 FAPYDVIFVTVGVDEVPETWFTQLKEG 173 (322)
T ss_pred cCCccEEEECCchHHhHHHHHHhcCCC
Confidence 136999999988777677788889988
No 162
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.90 E-value=0.0061 Score=50.84 Aligned_cols=77 Identities=21% Similarity=0.258 Sum_probs=55.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC---CEEeCCCCCCchHHHHHHhhcCC--CccEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---TEFVNPKDHDKPIQQVLVDLTDG--GVDYS 268 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga---~~~i~~~~~~~~~~~~v~~~~~g--g~d~v 268 (291)
|.+|||.|+ +++|+..++-...+|- +||...+++++++.+++.-. ..+.|..+ .....+.+.++... ..+++
T Consensus 5 gnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d-~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 5 GNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD-RDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred CcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc-hhhHHHHHHHHHhhCCchhee
Confidence 679999966 9999999988889998 89999999999999876433 22334333 12233334444333 57999
Q ss_pred EEcCC
Q 022865 269 FECIG 273 (291)
Q Consensus 269 ~d~~g 273 (291)
+|+.|
T Consensus 83 iNNAG 87 (245)
T COG3967 83 INNAG 87 (245)
T ss_pred eeccc
Confidence 99988
No 163
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.88 E-value=0.0039 Score=57.77 Aligned_cols=99 Identities=20% Similarity=0.250 Sum_probs=67.7
Q ss_pred hhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhc
Q 022865 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 182 a~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~ 261 (291)
.+..+.+...++++++||-+|+|. |..+..+++..|+ +|++++.+++.++.+++......+.... .++ .++
T Consensus 155 k~~~l~~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~----~~l- 225 (383)
T PRK11705 155 KLDLICRKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDY----RDL- 225 (383)
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cch----hhc-
Confidence 344456677889999999999864 7788888988888 9999999999999987643221111110 111 112
Q ss_pred CCCccEEEE-----cCCC---hHHHHHHHHHhhccC
Q 022865 262 DGGVDYSFE-----CIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 262 ~gg~d~v~d-----~~g~---~~~~~~~~~~l~~~g 289 (291)
.+.||.|+. .+|. +..++.+.+.|+++|
T Consensus 226 ~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG 261 (383)
T PRK11705 226 NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDG 261 (383)
T ss_pred CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCc
Confidence 347998864 3443 356788888999983
No 164
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.011 Score=50.68 Aligned_cols=77 Identities=29% Similarity=0.425 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEE-eCCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~-i~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
++++++|+|+ |.+|...++.+...|+ +|+.++++.++.+... +.+...+ .|..+ .....+.+.. .+++|++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~--~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD-DAAIRAALAA--AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC-HHHHHHHHHH--hCCCCEEEE
Confidence 4678999988 9999999999999999 8999988887765443 3444322 23322 1222222222 237999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 9884
No 165
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.83 E-value=0.013 Score=48.48 Aligned_cols=95 Identities=22% Similarity=0.292 Sum_probs=57.6
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-Ccc
Q 022865 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVD 266 (291)
Q Consensus 189 ~~~~~~g~~vlI~G~g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d 266 (291)
...++++++||.+|+|+-++ +..+++.. +..+|+++|.++.. ...+.. .+..+..+....+.+.+.... ++|
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHhCCCCcc
Confidence 44568999999999987554 44444443 44489999999864 112332 222221123333445554444 899
Q ss_pred EEEEc-----CCC------------hHHHHHHHHHhhccCC
Q 022865 267 YSFEC-----IGN------------VSVMRAALECCHKVSG 290 (291)
Q Consensus 267 ~v~d~-----~g~------------~~~~~~~~~~l~~~gg 290 (291)
+|+.. .|. ...+..+.++|+++ |
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G 140 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-G 140 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-C
Confidence 99952 121 35688889999998 5
No 166
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.81 E-value=0.0079 Score=56.23 Aligned_cols=76 Identities=13% Similarity=0.107 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
-.+.+++|+|+|.+|.+++..+...|+.+|+++.++.++.+ ++.+++...++.+ +.+.+... .+|+||+|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--------~~l~~~l~-~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--------SELPQLIK-KADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--------HHHHHHhc-cCCEEEEC
Confidence 35789999999999999999999999888999999877754 4445652122222 12222222 59999999
Q ss_pred CCChHH
Q 022865 272 IGNVSV 277 (291)
Q Consensus 272 ~g~~~~ 277 (291)
++.+..
T Consensus 250 T~a~~~ 255 (414)
T PRK13940 250 VNVLEY 255 (414)
T ss_pred cCCCCe
Confidence 998653
No 167
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.0091 Score=51.67 Aligned_cols=79 Identities=28% Similarity=0.388 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEE-eCCCCCCchHHHHHHhhc--CCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
++++++|+|+ |.+|...++.+...|+ +|+++++++++.+.. .+++.... .|..+ ..++.+.+.+.. .+++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD-EDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 5789999998 9999999998888998 899998887766544 34443222 22222 223333333322 2379999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 999874
No 168
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.0097 Score=50.52 Aligned_cols=77 Identities=17% Similarity=0.211 Sum_probs=52.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe--CCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV--NPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i--~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
++++|+|+ |.+|...+..+...|+ +|+++++++++.+.+++++....+ |..+ .+++.+.+..+..+++|++|.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcC
Confidence 47899987 9999998888888899 899999888776655554322222 2222 23344444444444899999988
Q ss_pred CC
Q 022865 273 GN 274 (291)
Q Consensus 273 g~ 274 (291)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 64
No 169
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.0065 Score=55.13 Aligned_cols=79 Identities=22% Similarity=0.384 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEE-e--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ +++|...++.+...|+ +|+.+++++++++.+ ++.|.+.. + |..+ .+++.+.+.+.. .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhcC
Confidence 4678999988 9999999999989999 899999998877543 33454332 2 3322 223333332221 25
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999883
No 170
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.75 E-value=0.0074 Score=48.66 Aligned_cols=83 Identities=27% Similarity=0.371 Sum_probs=53.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.-.|++++|+|-|.+|.-.++.++.+|+ +|++++.++-++-.+..-|.+ +. ...+.+ ..+|++|.+
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~-------~~~~a~-----~~adi~vta 85 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM-------TLEEAL-----RDADIFVTA 85 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE--------HHHHT-----TT-SEEEE-
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec-------CHHHHH-----hhCCEEEEC
Confidence 4578999999999999999999999999 999999999876666555543 11 121222 258999999
Q ss_pred CCChHHH-HHHHHHhhcc
Q 022865 272 IGNVSVM-RAALECCHKV 288 (291)
Q Consensus 272 ~g~~~~~-~~~~~~l~~~ 288 (291)
+|+...+ ..-++.|+++
T Consensus 86 TG~~~vi~~e~~~~mkdg 103 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDG 103 (162)
T ss_dssp SSSSSSB-HHHHHHS-TT
T ss_pred CCCccccCHHHHHHhcCC
Confidence 9986532 3555556554
No 171
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.75 E-value=0.017 Score=47.55 Aligned_cols=97 Identities=28% Similarity=0.335 Sum_probs=65.5
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCEEeCCCCCCchHHHHHHhhcCC
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
....+++++.++=+|+|. |..++++++.....+|++++++++.+++.+ +||.+-+..... +..+.+..+.
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g---~Ap~~L~~~~-- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG---DAPEALPDLP-- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec---cchHhhcCCC--
Confidence 456778999777778865 777888886655569999999999887774 578764433332 1222333321
Q ss_pred CccEEEEcCCC--hHHHHHHHHHhhccCCC
Q 022865 264 GVDYSFECIGN--VSVMRAALECCHKVSGT 291 (291)
Q Consensus 264 g~d~v~d~~g~--~~~~~~~~~~l~~~gg~ 291 (291)
.+|.+|---|. +..++.+++.|+++ ||
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~g-gr 130 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPG-GR 130 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcC-Ce
Confidence 58888865442 45678888888888 54
No 172
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.013 Score=49.62 Aligned_cols=77 Identities=18% Similarity=0.272 Sum_probs=52.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
++++|+|+ |.+|...++.+...|+ +|+.++++.++.+.++..+.... .|..+ ...+.+.+.+...+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD-PASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEECCC
Confidence 46889987 9999998887777898 89999898887776665554321 22222 233334333333337999999887
Q ss_pred C
Q 022865 274 N 274 (291)
Q Consensus 274 ~ 274 (291)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 5
No 173
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.73 E-value=0.0055 Score=54.38 Aligned_cols=42 Identities=24% Similarity=0.317 Sum_probs=36.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
++++++|+|+|+.+.+++..+..+|+++|+++.++.+|.+.+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~L 165 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRL 165 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 577999999999999999999999998999999998876544
No 174
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.70 E-value=0.011 Score=56.62 Aligned_cols=74 Identities=28% Similarity=0.303 Sum_probs=54.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
+.++++|+|+|.|.+|++++.+++..|+ +|++.|..+++.+.++++|+. ++.... ..+.+ ..+|+|+.+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~-~~~~~~----~~~~l-----~~~D~VV~S 77 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVA-TVSTSD----AVQQI-----ADYALVVTS 77 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCE-EEcCcc----hHhHh-----hcCCEEEEC
Confidence 5578899999999999999999999999 899999877776667777773 332211 11112 147999999
Q ss_pred CCChH
Q 022865 272 IGNVS 276 (291)
Q Consensus 272 ~g~~~ 276 (291)
.|-+.
T Consensus 78 pGi~~ 82 (488)
T PRK03369 78 PGFRP 82 (488)
T ss_pred CCCCC
Confidence 88643
No 175
>PRK12742 oxidoreductase; Provisional
Probab=96.68 E-value=0.015 Score=49.50 Aligned_cols=77 Identities=22% Similarity=0.249 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHH-HHHhcCCCEE-eCCCCCCchHHHHHHhhcCCCccEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD-RAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~-~~~~~ga~~~-i~~~~~~~~~~~~v~~~~~gg~d~v~ 269 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+.+ ++++.+ +..+++...+ .|..+ ...+.+.+.+ .+++|++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD-RDAVIDVVRK--SGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC-HHHHHHHHHH--hCCCcEEE
Confidence 4679999987 9999999998888999 7776644 444443 3345555332 22221 2233333433 24699999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
++.|.
T Consensus 81 ~~ag~ 85 (237)
T PRK12742 81 VNAGI 85 (237)
T ss_pred ECCCC
Confidence 99874
No 176
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.013 Score=52.20 Aligned_cols=79 Identities=22% Similarity=0.336 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC--CEE---eCCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--TEF---VNPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga--~~~---i~~~~~~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ |++|...++.+...|+ +|+.+++++++++.+ ++++. ... .|..+ ..+..+.+.+.. .++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 5689999988 9999999999989999 899998988876544 44542 111 23322 233333333322 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999999984
No 177
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.012 Score=49.92 Aligned_cols=79 Identities=23% Similarity=0.253 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEE-eCCCCCCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.. ++.+...+ .|..+ ..++.+.+.+.. .+++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence 3679999988 9999999988888899 899998877653322 22333222 12221 223333333322 2379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+||.+.|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998874
No 178
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.62 E-value=0.012 Score=51.21 Aligned_cols=78 Identities=22% Similarity=0.261 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc-CCCE-Ee--CCCCCCchHHHHHHhhcC--CCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTE-FV--NPKDHDKPIQQVLVDLTD--GGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~-ga~~-~i--~~~~~~~~~~~~v~~~~~--gg~d 266 (291)
++++++|+|+ |++|...++.+...|+ +|+.+++++++++.+.+. +... .+ |..+ ..+..+.+.+... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 4688999987 9999999988888999 899998888776655442 3211 12 2222 2233344443321 4789
Q ss_pred EEEEcCC
Q 022865 267 YSFECIG 273 (291)
Q Consensus 267 ~v~d~~g 273 (291)
++|++.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999987
No 179
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.62 E-value=0.013 Score=50.89 Aligned_cols=80 Identities=23% Similarity=0.236 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCC-EEeCCCC-CCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVT-EFVNPKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~-~~i~~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
+++++||+|+ +++|...++.+...|+ +|+.+++++++++.+.+ ++.. ..+..+- +..++...+.+.. .+.+|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4678999987 9999999988888999 89999998887665543 3321 1221111 1223333343322 247999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 84 li~~ag~ 90 (263)
T PRK06200 84 FVGNAGI 90 (263)
T ss_pred EEECCCC
Confidence 9999883
No 180
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.011 Score=51.10 Aligned_cols=82 Identities=24% Similarity=0.246 Sum_probs=53.6
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCC--EEe--CCCCCCchHHHHHHhhc--CC
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVT--EFV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~--~~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
..++.++||+|+ |.+|...+..+...|+ +|+.++++++..+...+ +... ..+ +..+ ..++.+.+.+.. -+
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVERFG 85 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 357789999988 9999999998888999 79999888776655433 2211 222 2222 223333333321 13
Q ss_pred CccEEEEcCCCh
Q 022865 264 GVDYSFECIGNV 275 (291)
Q Consensus 264 g~d~v~d~~g~~ 275 (291)
++|.||.+.|..
T Consensus 86 ~~d~vi~~ag~~ 97 (264)
T PRK12829 86 GLDVLVNNAGIA 97 (264)
T ss_pred CCCEEEECCCCC
Confidence 799999998753
No 181
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.61 E-value=0.023 Score=47.85 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=31.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
...+|+|+|.|++|..+++.+..+|..+++.+|.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 34679999999999999999999999899999877
No 182
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.60 E-value=0.0067 Score=53.65 Aligned_cols=43 Identities=26% Similarity=0.348 Sum_probs=38.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
++++++|+|+|+.+.+++..++..|+++|+++.++.+|.+.+.
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La 167 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELA 167 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 5789999999999999999999999889999999998866554
No 183
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.013 Score=51.06 Aligned_cols=79 Identities=19% Similarity=0.223 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCC-EEe--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVT-EFV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~-~~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++++.+. + .+.. ..+ |..+ .....+.+.+.. -+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5689999988 9999999998888999 8999988887655432 2 2322 122 2222 223333333321 14
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|+++|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999999873
No 184
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.014 Score=50.44 Aligned_cols=80 Identities=20% Similarity=0.285 Sum_probs=53.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-c---CC-CEEe--CCCCCCchHHHHHHhhc--C
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F---GV-TEFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~---ga-~~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++++|+|+ |.+|..++..+...|+ +|+++.+++++++.+.+ + +. ..++ |..+ ..++.+.+.+.. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence 35689999987 9999999988888999 89999898887654432 1 21 1222 2222 233444343322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+.+|++|++.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 479999999884
No 185
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.58 E-value=0.015 Score=49.57 Aligned_cols=80 Identities=25% Similarity=0.295 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc---CCCEEeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---GVTEFVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~---ga~~~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
++++++|+|+ |.+|..+++.+...|+ +|+.+++++++++.+ +++ +.-..+..+- +..+..+.+.+.. .+++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4679999988 9999999999999999 899999988876555 222 2222232221 1233333333322 2368
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|.++.+.|.
T Consensus 83 d~ii~~ag~ 91 (238)
T PRK05786 83 DGLVVTVGG 91 (238)
T ss_pred CEEEEcCCC
Confidence 999998874
No 186
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.58 E-value=0.015 Score=48.78 Aligned_cols=80 Identities=18% Similarity=0.259 Sum_probs=59.9
Q ss_pred CCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE-EeCCCCCC--chHHHHHHhhcCCCccE
Q 022865 194 PGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKDHD--KPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~--g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~-~i~~~~~~--~~~~~~v~~~~~gg~d~ 267 (291)
..+.|||.|+ |++|.+.+.-...-|+ .|+++.+.-+...-+. ++|..- -+|..+++ ..+.+++++.++|+.|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 3467899875 9999998888888899 9999999988876665 777522 23433321 24566777777889999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
.+|..|.
T Consensus 85 L~NNAG~ 91 (289)
T KOG1209|consen 85 LYNNAGQ 91 (289)
T ss_pred EEcCCCC
Confidence 9998885
No 187
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.017 Score=50.58 Aligned_cols=78 Identities=27% Similarity=0.292 Sum_probs=52.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEEe--CCCCCCchHHHHHHhhc--CCCccEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV--NPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~i--~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
+.++||+|+ |++|...++.+...|+ +|+.+++++++++.+ ++++....+ |..+ .+++.+.+.+.. .+++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD-PASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 578999988 9999998888888899 888888888876544 344422222 3322 233333343332 2479999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
+++.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999884
No 188
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.53 E-value=0.027 Score=50.00 Aligned_cols=42 Identities=29% Similarity=0.372 Sum_probs=37.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
.+++++|+|+|+.|.+++..+..+|+++|+.++++.+|.+.+
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 457899999999999999999999998999999998876554
No 189
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.019 Score=50.08 Aligned_cols=79 Identities=20% Similarity=0.348 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCC-EEe--CCCCCCchHHHHHHhhc-CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVT-EFV--NPKDHDKPIQQVLVDLT-DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~----ga~-~~i--~~~~~~~~~~~~v~~~~-~g 263 (291)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. ++ +.+ ..+ |..+ ..+..+.+.+.. .+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhhC
Confidence 4688999988 9999999998888999 8999988887765443 22 322 122 2222 233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++++.|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 79999999874
No 190
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.015 Score=50.17 Aligned_cols=79 Identities=20% Similarity=0.213 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCCE-E--eCCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~~-~--i~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ +++|...++.+...|+ +|+.+++++++++.+. + .+... . .|..+ ..++.+.+.+.. .+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4689999988 9999999988888999 8999988887665443 2 23221 2 22222 233444443322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++++.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 191
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.017 Score=50.69 Aligned_cols=78 Identities=23% Similarity=0.229 Sum_probs=52.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-E-Ee--CCCCCCchHHHHHHhhcC--CCccE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-E-FV--NPKDHDKPIQQVLVDLTD--GGVDY 267 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~-~i--~~~~~~~~~~~~v~~~~~--gg~d~ 267 (291)
++++||+|+ |.+|...++.+...|+ +|+++++++++++.+.+.... . .+ |..+ ...+.+.+.+... +++|+
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCCE
Confidence 568999988 9999999988888899 899999988877655443221 1 22 2222 2333333443221 36999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
++++.|.
T Consensus 82 vv~~ag~ 88 (277)
T PRK06180 82 LVNNAGY 88 (277)
T ss_pred EEECCCc
Confidence 9999885
No 192
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.48 E-value=0.021 Score=50.38 Aligned_cols=44 Identities=27% Similarity=0.262 Sum_probs=37.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
...+++++|+|+|+.+.+++..++.+|+.+|+++.++.+|.+.+
T Consensus 119 ~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~l 162 (272)
T PRK12550 119 VPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKAL 162 (272)
T ss_pred CCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 34456899999999999999999999998899999998876554
No 193
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.47 E-value=0.02 Score=47.15 Aligned_cols=46 Identities=46% Similarity=0.672 Sum_probs=37.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g 239 (291)
-.|++|.|+|.|.+|...++.++.+|+ +|++.++.....+...+++
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~ 79 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFG 79 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccc
Confidence 358899999999999999999999999 9999999888665334443
No 194
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.019 Score=48.84 Aligned_cols=80 Identities=21% Similarity=0.295 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC---CEEeCCC-CCCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV---TEFVNPK-DHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga---~~~i~~~-~~~~~~~~~v~~~~--~gg~ 265 (291)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++++.+ +++.. -+.+..+ .+..++.+.+.+.. .+++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 9999998888878899 799998888765544 33321 1222211 11233444444332 1379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|++.|.
T Consensus 84 d~vi~~ag~ 92 (237)
T PRK07326 84 DVLIANAGV 92 (237)
T ss_pred CEEEECCCC
Confidence 999999874
No 195
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.019 Score=49.46 Aligned_cols=79 Identities=23% Similarity=0.258 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE--Ee--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~--~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
+++++||+|+ |.+|...++.+...|+ +|+.++++++..+...++.... .+ |..+ ..++...+.+.. .+++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4679999988 9999998888888899 8999988877665555443221 22 2222 223333333322 13799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+++.+.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99999884
No 196
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.02 Score=49.68 Aligned_cols=81 Identities=23% Similarity=0.369 Sum_probs=53.3
Q ss_pred CCCCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----cCCCEE--e--CCCCCCchHHHHHHhh
Q 022865 192 VEPGSIVAVFGL-G-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTEF--V--NPKDHDKPIQQVLVDL 260 (291)
Q Consensus 192 ~~~g~~vlI~G~-g-~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-----~ga~~~--i--~~~~~~~~~~~~v~~~ 260 (291)
+.+++++||+|+ | ++|.+.++.+...|+ +|+++++++++++...+ ++...+ + |..+ ..++.+.+.+.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHH
Confidence 345789999987 6 799999999999999 79998888876654432 443222 2 2222 22333333332
Q ss_pred c--CCCccEEEEcCCC
Q 022865 261 T--DGGVDYSFECIGN 274 (291)
Q Consensus 261 ~--~gg~d~v~d~~g~ 274 (291)
. .+++|++|++.|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 2 2479999999984
No 197
>PRK06196 oxidoreductase; Provisional
Probab=96.42 E-value=0.024 Score=50.84 Aligned_cols=79 Identities=22% Similarity=0.218 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEe--CCCCCCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFV--NPKDHDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i--~~~~~~~~~~~~v~~~~--~gg~d~ 267 (291)
.++++||+|+ |++|...+..+...|+ +|++++++.++.+.+. ++..-..+ |..+ ..++.+.+.+.. .+++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD-LESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC-HHHHHHHHHHHHhcCCCCCE
Confidence 4678999988 9999998888888899 8999888887665432 33211222 2222 233434444332 247999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9999873
No 198
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.024 Score=49.12 Aligned_cols=78 Identities=15% Similarity=0.140 Sum_probs=51.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCC--C-EEe--CCCCCCchHHHHHHhhc--CCCc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGV--T-EFV--NPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga--~-~~i--~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
+.++||+|+ |.+|...+..+...|+ +|+.+++++++++...+ +.. + ..+ |..+ ..++.+.+.+.. .+.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCC
Confidence 468999987 9999998888888899 89999998887655432 221 1 112 2222 234444444332 2368
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+++++.|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999999873
No 199
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.38 E-value=0.035 Score=42.05 Aligned_cols=96 Identities=21% Similarity=0.298 Sum_probs=62.1
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhcCC
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
....+.++++++-+|+|. |..+..+++..+..+|+++|.++...+.+++ ++...+..... +....+.. ...
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~ 87 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG---DAPEALED-SLP 87 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec---cccccChh-hcC
Confidence 344566778899999977 8889999988754599999999988877643 33322111111 00000111 123
Q ss_pred CccEEEEcCCC---hHHHHHHHHHhhcc
Q 022865 264 GVDYSFECIGN---VSVMRAALECCHKV 288 (291)
Q Consensus 264 g~d~v~d~~g~---~~~~~~~~~~l~~~ 288 (291)
.+|+|+-..+. ...++.+.+.|+++
T Consensus 88 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~g 115 (124)
T TIGR02469 88 EPDRVFIGGSGGLLQEILEAIWRRLRPG 115 (124)
T ss_pred CCCEEEECCcchhHHHHHHHHHHHcCCC
Confidence 79999876433 34688899999988
No 200
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.35 E-value=0.029 Score=50.67 Aligned_cols=80 Identities=18% Similarity=0.223 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCCE----EeCCCCCCchHHHHHHhhcCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE----FVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~----~ga~~----~i~~~~~~~~~~~~v~~~~~g 263 (291)
.|++++|+|+ +++|...+..+...|+ +|+.+++++++++.+. + .+... ..|..++..+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 4789999998 9999988877777899 8999999998876542 2 22111 123322112333444444444
Q ss_pred -CccEEEEcCCC
Q 022865 264 -GVDYSFECIGN 274 (291)
Q Consensus 264 -g~d~v~d~~g~ 274 (291)
.+|++++++|.
T Consensus 131 ~didilVnnAG~ 142 (320)
T PLN02780 131 LDVGVLINNVGV 142 (320)
T ss_pred CCccEEEEecCc
Confidence 57799998873
No 201
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.33 E-value=0.021 Score=54.40 Aligned_cols=78 Identities=31% Similarity=0.404 Sum_probs=54.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHHHhcCCCEEeCCCCCCch
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP---------------------KKFDRAKNFGVTEFVNPKDHDKP 252 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~---------------------~~~~~~~~~ga~~~i~~~~~~~~ 252 (291)
.+++|+|+|+|+.|+.++..++..|+ .|+.++..+ ...+.++++|.+..++..-. .+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG-RD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC-Cc
Confidence 57899999999999999999999999 788887654 24566778887655443211 11
Q ss_pred HHHHHHhhcCCCccEEEEcCCChH
Q 022865 253 IQQVLVDLTDGGVDYSFECIGNVS 276 (291)
Q Consensus 253 ~~~~v~~~~~gg~d~v~d~~g~~~ 276 (291)
+ .+.++. .++|.||.++|...
T Consensus 218 ~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 218 I--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred c--CHHHHH-hcCCEEEEEeCCCC
Confidence 0 112222 26999999999743
No 202
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.32 E-value=0.025 Score=48.48 Aligned_cols=80 Identities=18% Similarity=0.299 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhcC--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLTD--GG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~~--gg 264 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++++.+ ++.+... .+..+- +..++.+.+..... ++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999988 9999999998888998 899998888765443 2234332 222221 11233333433322 47
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|.||++.|.
T Consensus 83 id~vi~~ag~ 92 (253)
T PRK08217 83 LNGLINNAGI 92 (253)
T ss_pred CCEEEECCCc
Confidence 8999999883
No 203
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.32 E-value=0.024 Score=48.57 Aligned_cols=80 Identities=21% Similarity=0.272 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcC--CC-EEeCCC-CCCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG--VT-EFVNPK-DHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~g--a~-~~i~~~-~~~~~~~~~v~~~~--~gg~ 265 (291)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. .+. .. ..+..+ .+..++...+.+.. .+.+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4568999988 9999998888888899 7999999987765442 222 11 122111 12234444444321 2379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+||.+.|.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999999874
No 204
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.31 E-value=0.025 Score=54.68 Aligned_cols=47 Identities=17% Similarity=0.150 Sum_probs=39.3
Q ss_pred hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
...+.+.++++||+|+ |.+|...++.+...|+ +|+++.++.++++.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 4556678899999998 9999999988888899 899988988876543
No 205
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.021 Score=49.60 Aligned_cols=79 Identities=25% Similarity=0.321 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----cCCCEE----eCCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTEF----VNPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-----~ga~~~----i~~~~~~~~~~~~v~~~~-- 261 (291)
.+++++|+|+ +++|...++.+...|+ +|+.+++++++++.+.+ .+...+ .|..+ ..++.+.+.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4678999988 9999999988888999 89999898876554321 111121 23222 233333333332
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++++++|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 2479999999884
No 206
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.29 E-value=0.043 Score=48.73 Aligned_cols=42 Identities=26% Similarity=0.271 Sum_probs=36.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
++++++|+|+|+.+.+++..+..+|+++|+.++++.+|.+.+
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L 167 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL 167 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence 467899999999999999888889998999999998876554
No 207
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.027 Score=50.06 Aligned_cols=80 Identities=23% Similarity=0.291 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
.+++++|+|+ |++|...++.+...|+ +|++++++.++++.+.+ .+.+. .+..+- +..++.+.+.... .++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3578999987 9999999988888898 89999998877654432 23221 222221 1233333333221 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 118 id~li~~AG~ 127 (293)
T PRK05866 118 VDILINNAGR 127 (293)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 208
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.27 E-value=0.045 Score=46.39 Aligned_cols=96 Identities=17% Similarity=0.223 Sum_probs=64.9
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCCE--EeCCCCCCchHHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLV 258 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~----~ga~~--~i~~~~~~~~~~~~v~ 258 (291)
+.....++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++ .|... ++..+.. ..+
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~-~~~----- 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGT-LGY----- 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc-cCC-----
Confidence 44566788999999999876 7788888888763 389999999988777754 33321 2221110 000
Q ss_pred hhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 259 DLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 259 ~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
...+.||.|+-....+......++.|+++|
T Consensus 141 -~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG 170 (212)
T PRK13942 141 -EENAPYDRIYVTAAGPDIPKPLIEQLKDGG 170 (212)
T ss_pred -CcCCCcCEEEECCCcccchHHHHHhhCCCc
Confidence 112379998876666666778888999983
No 209
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.026 Score=48.85 Aligned_cols=80 Identities=18% Similarity=0.151 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc---CCCE-EeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF---GVTE-FVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~---ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.++.+++ +... .+..+- +..+....+.+.. .+++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999988 9999998888888899 788888887766544432 3221 222111 1223333333322 2479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999983
No 210
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.26 E-value=0.024 Score=56.21 Aligned_cols=76 Identities=29% Similarity=0.340 Sum_probs=55.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHhcCCCEEeCCCCC-Cc
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-DK 251 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~---------------------~~~~~~~~ga~~~i~~~~~-~~ 251 (291)
.+++|+|+|+|+.|+.++..++.+|+ +|++++..+. +.++++++|.+..++..-. +.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 47899999999999999999999999 7888887753 4566778887655544321 11
Q ss_pred hHHHHHHhhcCCCccEEEEcCCCh
Q 022865 252 PIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 252 ~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
.+ .++. .++|.||.++|..
T Consensus 388 ~~----~~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TF----SDLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CH----HHHH-hcCCEEEEeCCCC
Confidence 22 2222 2699999999963
No 211
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.035 Score=48.22 Aligned_cols=80 Identities=24% Similarity=0.321 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc--CCC-EEeCCCC-CCchHHHHHHhhc-CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--GVT-EFVNPKD-HDKPIQQVLVDLT-DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~--ga~-~~i~~~~-~~~~~~~~v~~~~-~gg~d 266 (291)
++.++||+|+ |.+|...+..+...|+ +|+++++++++++.+. ++ +.. ..+..+- +..+..+.+.... .+.+|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4678999987 9999998888888898 8999999887765543 22 211 1221111 1122222222221 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+++.+.|.
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 99999875
No 212
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.03 Score=48.03 Aligned_cols=79 Identities=25% Similarity=0.324 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
++++++|.|+ |.+|...++.+...|+ +|+.+++++++++.. ++++... .+ |..+ ..+....+.... .+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4678999988 9999999999889999 899998887765443 3455432 22 2221 122222222222 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99999874
No 213
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.027 Score=51.19 Aligned_cols=79 Identities=19% Similarity=0.200 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEE-e--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++++|+|+ |++|...++.+...|+ +|+.+++++++++.+ ++.|.+.. + |..+ ..++.+.+.... -+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence 4578999988 9999999988888999 899998988776543 23454332 2 3222 233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 214
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.03 Score=48.29 Aligned_cols=73 Identities=16% Similarity=0.110 Sum_probs=48.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE-Ee--CCCCCCchHHHHHHhhcCCCcc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FV--NPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~-~i--~~~~~~~~~~~~v~~~~~gg~d 266 (291)
++++||+|+ |.+|...++.+...|+ +|+++.+++++.+.+.+ .+... ++ |..+ . +.+.....+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~---~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD--A---IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC--H---HHHHHHhcCCCC
Confidence 457999988 9999999999989998 88888887766544332 23221 21 2222 1 223333334799
Q ss_pred EEEEcCC
Q 022865 267 YSFECIG 273 (291)
Q Consensus 267 ~v~d~~g 273 (291)
++|++.|
T Consensus 76 ~vi~~ag 82 (257)
T PRK09291 76 VLLNNAG 82 (257)
T ss_pred EEEECCC
Confidence 9999987
No 215
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.23 E-value=0.027 Score=52.15 Aligned_cols=85 Identities=27% Similarity=0.359 Sum_probs=50.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh--cCCCE-EeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN--FGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~--~ga~~-~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
|+|+|+|.+|..+++.+....- .+|++.+++.++++.+.+ .+... .+..+- .-.+.+.++.. +.|+|++|+|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~---~~~~~l~~~~~-~~dvVin~~g 76 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDV---NDPESLAELLR-GCDVVINCAG 76 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--T---TTHHHHHHHHT-TSSEEEE-SS
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEec---CCHHHHHHHHh-cCCEEEECCc
Confidence 6889999999999988887764 389999999999776653 22211 111111 11122444433 4699999999
Q ss_pred ChHHHHHHHHHhh
Q 022865 274 NVSVMRAALECCH 286 (291)
Q Consensus 274 ~~~~~~~~~~~l~ 286 (291)
.......+..|++
T Consensus 77 p~~~~~v~~~~i~ 89 (386)
T PF03435_consen 77 PFFGEPVARACIE 89 (386)
T ss_dssp GGGHHHHHHHHHH
T ss_pred cchhHHHHHHHHH
Confidence 7644444444443
No 216
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.23 E-value=0.033 Score=47.77 Aligned_cols=79 Identities=20% Similarity=0.283 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~--~~~~~~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
.++++||+|+ |.+|...+..+...|+ +|+.+++++. ..+...+.+... .+ |..+ ..++...+.+.. .+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4689999988 9999998888888899 8988877652 123333444321 22 2222 233443444332 2379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+++++.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999999874
No 217
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.031 Score=47.95 Aligned_cols=80 Identities=26% Similarity=0.319 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc---CCC-EEeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---GVT-EFVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~---ga~-~~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
.++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ .++ +.. ..+..+- +..+..+.+.+.. .++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4578999988 9999998888888898 899998887654333 221 221 1222211 1223333333221 236
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+||.++|.
T Consensus 84 id~vi~~ag~ 93 (250)
T PRK07774 84 IDYLVNNAAI 93 (250)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 218
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.034 Score=47.95 Aligned_cols=79 Identities=23% Similarity=0.251 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---CCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~---ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+. ++ +... .+ |..+ ..++...+.+.. .+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD-EDQCANLVALALERFG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC-HHHHHHHHHHHHHHcC
Confidence 5678999987 9999998888888999 8999988887654442 22 3221 22 2222 233333333322 14
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 79999999874
No 219
>PRK00536 speE spermidine synthase; Provisional
Probab=96.20 E-value=0.015 Score=50.92 Aligned_cols=94 Identities=12% Similarity=-0.084 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccE-EEEc
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDY-SFEC 271 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~-v~d~ 271 (291)
...++|||+|+|- |.++-+++|+- .+|+.++-+++-.++++++-....-..++...++...+.+...+.+|+ ++|+
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs 147 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ 147 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence 3458999998766 66777888886 389999999999999988422110011221122222344433347995 5676
Q ss_pred CCChHHHHHHHHHhhccC
Q 022865 272 IGNVSVMRAALECCHKVS 289 (291)
Q Consensus 272 ~g~~~~~~~~~~~l~~~g 289 (291)
+-.+...+.+.++|+++|
T Consensus 148 ~~~~~fy~~~~~~L~~~G 165 (262)
T PRK00536 148 EPDIHKIDGLKRMLKEDG 165 (262)
T ss_pred CCChHHHHHHHHhcCCCc
Confidence 788888889999999994
No 220
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.20 E-value=0.031 Score=48.60 Aligned_cols=79 Identities=30% Similarity=0.400 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
++++++|+|+ +.+|...+..+...|+ +|+.+++++++++.+ ++++... .+ |..+ ..++.+.+.+.. .+.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4678999987 9999999988888999 899998888765444 4444321 22 2222 233333333322 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99999874
No 221
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.20 E-value=0.032 Score=48.21 Aligned_cols=79 Identities=19% Similarity=0.209 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhc--CCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
.+++++|+|+ |++|...++.+...|+ +|+.+.+ +++..+.+++.+...+ .|..+ ..+..+.+.+.. .+++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4678999987 9999999988888898 7766544 3444444443333222 22222 233444444332 2479999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 999874
No 222
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.033 Score=48.07 Aligned_cols=79 Identities=20% Similarity=0.278 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ +++|...+..+...|+ +|+.+++++++++.+. +.+.+. .+ |..+ ..+....+.+.. .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 3578999987 9999999988888899 8999888887765442 233322 22 2222 223333333322 23
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 223
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.034 Score=48.47 Aligned_cols=78 Identities=23% Similarity=0.283 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++++.. .+.+... .+ |..+ ..++.+.+.+.. .+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999988888999 899998887665333 2223221 22 3222 233444444432 23
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
++|++|.+.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 7999999876
No 224
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.17 E-value=0.018 Score=50.95 Aligned_cols=43 Identities=14% Similarity=0.186 Sum_probs=37.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
..+++++|+|+|++|.+++..+...|+.+|++++++.++.+.+
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l 163 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEEL 163 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 3567899999999999999999999976999999998876544
No 225
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.17 E-value=0.044 Score=48.12 Aligned_cols=79 Identities=19% Similarity=0.244 Sum_probs=50.1
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhHH----HHHhcCCCEEe--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFD----RAKNFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~g---~vG~~ai~~a~~~g~~~v~~~~~~~~~~~----~~~~~ga~~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|++ ++|.+.++.+...|+ +|+.++++++..+ +.+++|....+ |..+ ..+..+.+.+.. .
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED-IASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC-HHHHHHHHHHHHHHh
Confidence 46889999984 899999988888999 8888877653222 22334543322 2222 233334444332 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+.+|+++++.|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 479999999884
No 226
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.16 E-value=0.045 Score=46.67 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=50.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhcCCCEE-eCCCCCCchHHHHHHhhcC--CCccEEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYSF 269 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~~--gg~d~v~ 269 (291)
++++||.|+ +++|...++.+...|+ +|+.+++++++ .+..++.++..+ .|..+ ..+..+.+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEEE
Confidence 468999987 9999999988888899 88888877643 333344453221 22222 2333344443322 3699999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
++.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 99874
No 227
>PRK08589 short chain dehydrogenase; Validated
Probab=96.15 E-value=0.031 Score=48.97 Aligned_cols=79 Identities=22% Similarity=0.330 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc---CCCE-E--eCCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF---GVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~---ga~~-~--i~~~~~~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ +++|...++.+...|+ +|+.++++++..+.+.++ +... . .|..+ ..++...+.+.. .++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence 4679999988 9999998888888899 899988884333333332 3221 2 22222 233333333332 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 9999999874
No 228
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.048 Score=46.58 Aligned_cols=80 Identities=16% Similarity=0.104 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
..++++|+|+ |.+|...+..+...|. +|+++++++++.+.+.+ .+... .+..+- +..++...+.+.. .++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4578999987 9999999988888899 89999998876544422 22221 222211 1233333333322 236
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
.|+++++.|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 9999999884
No 229
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.11 E-value=0.046 Score=49.76 Aligned_cols=35 Identities=31% Similarity=0.350 Sum_probs=31.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|..++..+..+|..+++.+|.+.
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 46799999999999999999999998999998864
No 230
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.04 Score=49.48 Aligned_cols=79 Identities=20% Similarity=0.162 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----C-CC-EEe--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----G-VT-EFV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~----g-a~-~~i--~~~~~~~~~~~~v~~~~-- 261 (291)
.+++++|+|+ +++|...+..+...|+ +|+.+.+++++.+.+. ++ + .. ..+ |..+ ..+..+.+.+..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4678999988 9999998888888898 8988888877654332 21 1 11 122 3222 223333333322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+.+|++|++.|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 2379999999874
No 231
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.037 Score=47.40 Aligned_cols=79 Identities=24% Similarity=0.190 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCC-EEe--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT-EFV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~-~~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++.+++|+|+ |.+|...+..+...|+ +|+++++++++++... +.+.. .++ |..+ ..++.+.+.+.. .+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4688999988 9999999988888999 8888888877654432 22322 122 3222 223333333221 14
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|.++|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999885
No 232
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.09 E-value=0.05 Score=47.28 Aligned_cols=80 Identities=18% Similarity=0.253 Sum_probs=49.3
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhH----HHHHhcCCCEEeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFGVTEFVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~g---~vG~~ai~~a~~~g~~~v~~~~~~~~~~----~~~~~~ga~~~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
+++++||+|++ ++|.+.++.+...|+ +|+.++++++.. ++.++++....+..+- +..+..+.+.+.. .+
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 46899999873 899998888888899 888887775432 2223344323332221 1233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|+++++.|.
T Consensus 88 ~ld~lv~nAg~ 98 (258)
T PRK07533 88 RLDFLLHSIAF 98 (258)
T ss_pred CCCEEEEcCcc
Confidence 79999999874
No 233
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.08 E-value=0.039 Score=47.68 Aligned_cols=79 Identities=28% Similarity=0.372 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. +.|... .+ |..+ ..++.+.+.+.. .+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 4689999987 9999999888888899 8999988877654332 223222 22 3222 233444444322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|++|++.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 79999999884
No 234
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.08 E-value=0.034 Score=48.10 Aligned_cols=79 Identities=20% Similarity=0.357 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHhcCCCE-E--eCCCCCCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~--~~~~~~~ga~~-~--i~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++.. .+..++.+.+. . .|..+ ..++.+.+.+.. .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4689999987 9999999988888999 88887665421 22334444322 2 23322 233444444322 2479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999999874
No 235
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.07 E-value=0.054 Score=48.22 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=31.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
++++++|+|+|++|.+++..+...|+++|+.++++.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 567899999999999998888889997799998885
No 236
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.035 Score=47.65 Aligned_cols=80 Identities=21% Similarity=0.218 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc--CCC-EEeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--GVT-EFVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~--ga~-~~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
++++++|+|+ |.+|...++.+...|+ +|+.+.++.++.+... ++ +.. ..+..+- +..+..+.+.+.. .+++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999988 9999998887777898 8999988876554332 22 221 2222221 2233333333322 1479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+++.+.|.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999999884
No 237
>PRK06194 hypothetical protein; Provisional
Probab=96.05 E-value=0.046 Score=48.12 Aligned_cols=79 Identities=23% Similarity=0.315 Sum_probs=50.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---CCCE-EeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVTE-FVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~---ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
+.++||+|+ |.+|...+..+...|+ +|+.++++.++++... ++ +... .+..+- +..++.+.+.... .+++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999987 9999999988888899 8999988876654332 22 3322 122221 1223333333321 2478
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|++.|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999885
No 238
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.05 E-value=0.043 Score=47.52 Aligned_cols=79 Identities=25% Similarity=0.387 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++++... +.+... .+ |..+ ..++.+.+.+.. .+
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4688999987 9999998888888899 8999988887765443 222221 22 2222 233433333322 13
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|.+|.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 239
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.057 Score=45.90 Aligned_cols=74 Identities=19% Similarity=0.236 Sum_probs=49.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEE-eCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~-i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+++|+|+ |.+|...++.+...|+ +|+.+++++++++.+ ++++...+ .|..+ ..++.+.+.+.. +.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD-PASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC-HHHHHHHHHHHh-hcCcEEEECCC
Confidence 4889987 9999999988888898 899998888876544 34444322 22222 223333333332 36899999876
No 240
>PRK08643 acetoin reductase; Validated
Probab=96.04 E-value=0.039 Score=47.60 Aligned_cols=78 Identities=18% Similarity=0.235 Sum_probs=50.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. + .+... .+ |..+ .....+.+.+.. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 568899987 9999999988888899 8999988877654432 2 22221 22 2222 233333343332 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|.+.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 241
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.039 Score=47.76 Aligned_cols=79 Identities=24% Similarity=0.300 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc-----CCCE-Ee--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTE-FV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~-----ga~~-~i--~~~~~~~~~~~~v~~~~-- 261 (291)
.++++||.|+ +++|...+..+...|+ +|+.+++++++++... ++ +... .+ |..+ ..++.+.+.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 4678999987 9999999988888999 8999988877655432 22 2111 22 2222 233333343322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++|++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 2479999999883
No 242
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.02 E-value=0.08 Score=44.99 Aligned_cols=100 Identities=20% Similarity=0.164 Sum_probs=69.6
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhcC
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~~ 262 (291)
........++||=+|.+ +|+.++.+|..+. -.+++.++.++++.+.+++ .|.+..+..... .+..+.+.+...
T Consensus 53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~~~~ 130 (219)
T COG4122 53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSRLLD 130 (219)
T ss_pred HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHhccC
Confidence 34445577888888864 4888889999886 4489999999999888854 566553221110 244555665445
Q ss_pred CCccEEEEcCC---ChHHHHHHHHHhhccC
Q 022865 263 GGVDYSFECIG---NVSVMRAALECCHKVS 289 (291)
Q Consensus 263 gg~d~v~d~~g---~~~~~~~~~~~l~~~g 289 (291)
+.||+||==.. .+..++.+++.|++||
T Consensus 131 ~~fDliFIDadK~~yp~~le~~~~lLr~GG 160 (219)
T COG4122 131 GSFDLVFIDADKADYPEYLERALPLLRPGG 160 (219)
T ss_pred CCccEEEEeCChhhCHHHHHHHHHHhCCCc
Confidence 68998874333 4778999999999994
No 243
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.026 Score=49.24 Aligned_cols=76 Identities=25% Similarity=0.378 Sum_probs=50.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhc--CCCccEEEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSFE 270 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d~v~d 270 (291)
+++++|+|+ |.+|...++.+...|+ +|++++++.++.+... +...+ .|.. +..++.+.+.+.. .+.+|++|+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~-d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVT-DDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecC-CHHHHHHHHHHHHHhCCCCCEEEE
Confidence 467999987 9999998888888898 8999988876543221 22211 2222 2234444444432 247999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9984
No 244
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.01 E-value=0.043 Score=49.37 Aligned_cols=78 Identities=21% Similarity=0.243 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC---C-EEe--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV---T-EFV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga---~-~~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ .++.. . ..+ |..+ ..++.+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 4678999987 9999998888888898 899998888776543 23321 1 122 2222 223333333322 23
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
++|++|++.|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999987
No 245
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.043 Score=47.25 Aligned_cols=80 Identities=25% Similarity=0.347 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
++++++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+... .+..+- +..++.+.+.+.. .++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4679999988 9999998888888898 899998887764433 2333322 221111 1123333333221 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 85 id~li~~ag~ 94 (253)
T PRK06172 85 LDYAFNNAGI 94 (253)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 246
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.99 E-value=0.047 Score=47.26 Aligned_cols=79 Identities=20% Similarity=0.313 Sum_probs=49.8
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE--Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~g---~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~--~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
.++++||.|++ ++|.+.++.+...|+ +|+.+.++++..+.++++.... .+ |..+ ..+..+.+.+.. .+.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhCC
Confidence 46889999874 899998888888899 8888877754344444442211 22 2222 233434443332 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 84 iD~lv~nAg~ 93 (252)
T PRK06079 84 IDGIVHAIAY 93 (252)
T ss_pred CCEEEEcccc
Confidence 9999999873
No 247
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=95.99 E-value=0.036 Score=41.33 Aligned_cols=87 Identities=22% Similarity=0.188 Sum_probs=56.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhcC----C--CEEeCCCCCCchHHHHHHhhcCCCcc
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFG----V--TEFVNPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~-~g~~~v~~~~~~~~~~~~~~~~g----a--~~~i~~~~~~~~~~~~v~~~~~gg~d 266 (291)
|+.+||-+|+|. |..++.+++. .++ +|+++|.+++-++++++.- . ...+... ++ .......+.||
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~----d~--~~~~~~~~~~D 72 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG----DA--EFDPDFLEPFD 72 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES----CC--HGGTTTSSCEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC----cc--ccCcccCCCCC
Confidence 678999999876 8888888885 566 9999999999888886432 1 1112111 11 11111123799
Q ss_pred EEEEcC-CC---h------HHHHHHHHHhhcc
Q 022865 267 YSFECI-GN---V------SVMRAALECCHKV 288 (291)
Q Consensus 267 ~v~d~~-g~---~------~~~~~~~~~l~~~ 288 (291)
+|+... .. . ..++.+.+.|+++
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg 104 (112)
T PF12847_consen 73 LVICSGFTLHFLLPLDERRRVLERIRRLLKPG 104 (112)
T ss_dssp EEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE
T ss_pred EEEECCCccccccchhHHHHHHHHHHHhcCCC
Confidence 999876 21 1 2367788888887
No 248
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.065 Score=46.40 Aligned_cols=77 Identities=23% Similarity=0.260 Sum_probs=51.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcC-CC-EE--eCCCCCCchHHHHHHhhc---CCCcc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG-VT-EF--VNPKDHDKPIQQVLVDLT---DGGVD 266 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~g-a~-~~--i~~~~~~~~~~~~v~~~~---~gg~d 266 (291)
+++||+|+ |.+|...++.+...|+ +|+.++++.++++.+. .+. .. .. .|..+ ..++.+.+.... .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence 47899987 9999999988888898 8999988888766553 332 11 12 23322 233444444321 34799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+|+.+.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999884
No 249
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.034 Score=47.53 Aligned_cols=80 Identities=26% Similarity=0.357 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE----EeCCCC-CCchH---HHHHHhh
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE----FVNPKD-HDKPI---QQVLVDL 260 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~----~i~~~~-~~~~~---~~~v~~~ 260 (291)
++++++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+. +.+... ..|..+ +..++ .+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4578999987 9999998888888899 8999999887665442 122111 122211 11222 2333333
Q ss_pred cCCCccEEEEcCCC
Q 022865 261 TDGGVDYSFECIGN 274 (291)
Q Consensus 261 ~~gg~d~v~d~~g~ 274 (291)
..+.+|++|++.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 32478999999884
No 250
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.97 E-value=0.037 Score=47.93 Aligned_cols=78 Identities=26% Similarity=0.288 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---cCCCE-E--eCCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~---~ga~~-~--i~~~~~~~~~~~~v~~~~--~gg 264 (291)
+++++||.|+ |.+|...++.+...|+ +|+.+++++...++..+ .+.+. . .|..+ ..+..+.+.+.. .++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence 4678999988 9999999988888899 89998887644333333 23322 1 23322 233333444332 247
Q ss_pred ccEEEEcCC
Q 022865 265 VDYSFECIG 273 (291)
Q Consensus 265 ~d~v~d~~g 273 (291)
+|++++++|
T Consensus 85 id~lv~nAg 93 (260)
T PRK12823 85 IDVLINNVG 93 (260)
T ss_pred CeEEEECCc
Confidence 999999987
No 251
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.97 E-value=0.035 Score=55.14 Aligned_cols=76 Identities=25% Similarity=0.310 Sum_probs=52.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHhcCCCEEeCCCCC-C
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-D 250 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~---------------------~~~~~~~~ga~~~i~~~~~-~ 250 (291)
..+++|+|+|+|+.|+.++..++.+|+ +|++++..+. ..+.++++|.+...+..-. +
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 357899999999999999999999999 7888887543 3455667776543332110 1
Q ss_pred chHHHHHHhhcCCCccEEEEcCCC
Q 022865 251 KPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 251 ~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
..+ .++. ..+|.||.++|.
T Consensus 404 i~~----~~~~-~~~DavilAtGa 422 (654)
T PRK12769 404 ISL----ESLL-EDYDAVFVGVGT 422 (654)
T ss_pred CCH----HHHH-hcCCEEEEeCCC
Confidence 111 1111 269999999886
No 252
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.047 Score=47.09 Aligned_cols=79 Identities=20% Similarity=0.225 Sum_probs=51.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE-EeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
++++||.|+ +++|...++.+...|+ +|+++++++++++.+.+ .+... .+..+- +..++.+.+.+.. .+++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 468999987 9999999998888999 89999888776544322 22221 222221 1233434343322 2479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+++++.|.
T Consensus 80 d~lI~~ag~ 88 (252)
T PRK07677 80 DALINNAAG 88 (252)
T ss_pred cEEEECCCC
Confidence 999999873
No 253
>PRK05717 oxidoreductase; Validated
Probab=95.95 E-value=0.05 Score=47.01 Aligned_cols=79 Identities=22% Similarity=0.328 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-Ee--CCCCCCchHHHHHHhhcC--CCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVDLTD--GGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i--~~~~~~~~~~~~v~~~~~--gg~d 266 (291)
++++++|+|+ |.+|...+..+...|+ +|+.+++++++.+.. ++++... .+ |..+ ..++.+.+.+... +.+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4678999987 9999998888888898 898888776654433 3444322 22 2222 2233333333322 3699
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99999884
No 254
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.95 E-value=0.062 Score=45.70 Aligned_cols=79 Identities=20% Similarity=0.257 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEE---eCCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~---i~~~~~~~~~~~~v~~~~--~g 263 (291)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.. ++.+.... .|..+ ...+.+.+.+.. -+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 3468999998 9999999988888899 799998888765443 22333222 22222 233444444322 13
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|.|+.++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999999864
No 255
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.049 Score=47.19 Aligned_cols=79 Identities=22% Similarity=0.310 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc---CCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF---GVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~---ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
++++++|+|+ |.+|...++.+...|+ +|+.++++++..+...++ +... .+ |..+ ..++.+.+.+.. .+.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 4678999987 9999999988888899 899998887544443322 3221 22 2222 223333333322 237
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 9999999883
No 256
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.035 Score=47.89 Aligned_cols=75 Identities=24% Similarity=0.325 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EEe--CCCCCCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFV--NPKDHDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~i--~~~~~~~~~~~~v~~~~--~gg~d~ 267 (291)
.++++||+|+ |.+|...++.+...|+ +|+.+++++++ ...+.. ..+ |..+ ..++.+.+.... .+.+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD-PDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4689999987 9999999988888899 89998887764 112221 122 2222 233333333322 247999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|.+.|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9999873
No 257
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.05 Score=47.01 Aligned_cols=80 Identities=19% Similarity=0.236 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHhcCCCEE---eCCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~----~~~~ga~~~---i~~~~~~~~~~~~v~~~~--~g 263 (291)
++++++|+|+ |.+|...++.+...|+..|+++++++++.+. +++.+.... .|..+ ..++.+.+.... .+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4678999988 9999999999989999449999888765542 233343321 23222 223333333322 13
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 258
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.92 E-value=0.065 Score=45.47 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=30.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
..+|+|+|+|++|..+++.+..+|..+++.+|.+
T Consensus 28 ~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 28 KAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4679999999999999999999999889999887
No 259
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.064 Score=45.81 Aligned_cols=79 Identities=14% Similarity=0.098 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-EeCCC-CCCchHHHHHHhhc--CC-
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FVNPK-DHDKPIQQVLVDLT--DG- 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i~~~-~~~~~~~~~v~~~~--~g- 263 (291)
++++++|.|+ +++|...+..+...|+ +|+.+++++++++.+. +.+.+. .+..+ .+.++..+.+.+.. -+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4678999988 8999998888888899 8999988888765432 334322 22111 12233333333322 13
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
.+|++|++.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 7999999986
No 260
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.92 E-value=0.12 Score=45.52 Aligned_cols=35 Identities=31% Similarity=0.479 Sum_probs=31.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
...+|+|+|.|++|..++..+-..|..+++.+|.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 34689999999999999999999998899988865
No 261
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.046 Score=48.06 Aligned_cols=80 Identities=26% Similarity=0.273 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ |++|...+..+...|+ +|+.+++++++++.+. + .+.+. .+..+- +..++.+.+.+.. .+.
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 9999999988888999 8888888877655432 2 23322 122211 1233333333322 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 84 id~li~nAg~ 93 (275)
T PRK05876 84 VDVVFSNAGI 93 (275)
T ss_pred CCEEEECCCc
Confidence 9999999873
No 262
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.051 Score=48.49 Aligned_cols=79 Identities=19% Similarity=0.191 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc-----CCC-EEe--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF-----GVT-EFV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~-----ga~-~~i--~~~~~~~~~~~~v~~~~-- 261 (291)
.++++||+|+ |++|...++.+...|+ +|+.+.++.++.+.+ +++ +.. ..+ |..+ ..+..+.+.+..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHhh
Confidence 5689999988 9999998888888898 888888887765432 111 111 122 2222 233434444332
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++|+++|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 2379999999873
No 263
>PRK08264 short chain dehydrogenase; Validated
Probab=95.91 E-value=0.05 Score=46.32 Aligned_cols=76 Identities=21% Similarity=0.234 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EEeCCCC-CCchHHHHHHhhcCCCccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKD-HDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~i~~~~-~~~~~~~~v~~~~~gg~d~v~d 270 (291)
.+++++|+|+ |.+|...++.+...|+.+|+.++++.++.+. .+.. ..+..+- +..++.+.+... +.+|+||.
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~ 79 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILVN 79 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEEE
Confidence 4578999987 9999999998888898678888888776543 2222 1221111 122333333322 36899999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.|.
T Consensus 80 ~ag~ 83 (238)
T PRK08264 80 NAGI 83 (238)
T ss_pred CCCc
Confidence 9876
No 264
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.052 Score=47.48 Aligned_cols=77 Identities=21% Similarity=0.256 Sum_probs=50.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCE-E--eCCCCCCchHHHHHHhhc--CCCccEE
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~-~--i~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
+++||+|+ |.+|...++.+...|+ +|+++.+++++++.+++ ++... + .|..+ ...+.+.+.+.. .+++|+|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 57999987 9999998888888898 89999898877665543 23221 1 22222 223333343322 2378999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|.+.|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 999874
No 265
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.052 Score=47.06 Aligned_cols=78 Identities=18% Similarity=0.258 Sum_probs=49.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-EeCCCC-CCchHHHHHHhhc--CCCcc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d 266 (291)
.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. ..+... ++..+- +...+.+.+.+.. -+++|
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 57899988 9999999988888898 8999988876644332 223322 121111 1233334444332 13699
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+||.+.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999874
No 266
>PLN02253 xanthoxin dehydrogenase
Probab=95.89 E-value=0.046 Score=47.97 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC--C-EE--eCCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--T-EF--VNPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga--~-~~--i~~~~~~~~~~~~v~~~~--~gg 264 (291)
.++++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+ .+++. . .. .|..+ ..++.+.+.+.. .++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 3678999987 9999998888878898 899988876654333 33321 1 12 22222 223333333322 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 267
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.88 E-value=0.076 Score=50.18 Aligned_cols=78 Identities=24% Similarity=0.394 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhH-HHHHhcCCCEE-eCCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKF-DRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~--~~~-~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
+++++||+|+ |++|...++.+...|+ +|+.+++.+ +++ ++..+++...+ .|..+ ..+..+.+.... .+++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhCCCCC
Confidence 5789999988 9999999999888999 888887643 222 33344554322 23322 223333333322 23799
Q ss_pred EEEEcCC
Q 022865 267 YSFECIG 273 (291)
Q Consensus 267 ~v~d~~g 273 (291)
++|++.|
T Consensus 287 ~vi~~AG 293 (450)
T PRK08261 287 IVVHNAG 293 (450)
T ss_pred EEEECCC
Confidence 9999988
No 268
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.052 Score=46.70 Aligned_cols=79 Identities=20% Similarity=0.233 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCC-EEe--CCCCCCchHHHHHHhhcC--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVT-EFV--NPKDHDKPIQQVLVDLTD--G 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~-~~i--~~~~~~~~~~~~v~~~~~--g 263 (291)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++++.+. + .+.. ..+ +..+ ..+..+.+.+... +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 3578999987 9999999998888998 8999988877654432 2 2321 122 2222 2233333333221 3
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|+++++.|.
T Consensus 85 ~id~li~~ag~ 95 (252)
T PRK07035 85 RLDILVNNAAA 95 (252)
T ss_pred CCCEEEECCCc
Confidence 69999998873
No 269
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.88 E-value=0.07 Score=45.73 Aligned_cols=70 Identities=21% Similarity=0.274 Sum_probs=48.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCC--eEEEEcCC----hhh--------HHHHHhcCCCEEeCCCCCCchHHHHHH
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGAS--RVIGIDID----PKK--------FDRAKNFGVTEFVNPKDHDKPIQQVLV 258 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~--~v~~~~~~----~~~--------~~~~~~~ga~~~i~~~~~~~~~~~~v~ 258 (291)
-++.+++|+|+|..|..++..+...|++ +|+.++++ +++ .++++.++... . ..++.+.+.
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~-----~~~l~~~l~ 96 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T-----GGTLKEALK 96 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c-----cCCHHHHHh
Confidence 3567999999999999999888889998 89999998 443 33445443211 0 012223331
Q ss_pred hhcCCCccEEEEcCC
Q 022865 259 DLTDGGVDYSFECIG 273 (291)
Q Consensus 259 ~~~~gg~d~v~d~~g 273 (291)
++|++|++++
T Consensus 97 -----~~dvlIgaT~ 106 (226)
T cd05311 97 -----GADVFIGVSR 106 (226)
T ss_pred -----cCCEEEeCCC
Confidence 4899999987
No 270
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.86 E-value=0.061 Score=49.96 Aligned_cols=73 Identities=19% Similarity=0.240 Sum_probs=54.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH-HHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~-~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
.+.++||+|+|-+|..++..+...|..+|+...++.+|. ++++++|+. ++... +..+.+. .+|+||.++
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~----el~~~l~-----~~DvVissT 246 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE----ELLEALA-----EADVVISST 246 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH----HHHHhhh-----hCCEEEEec
Confidence 678999999999999999999999988999998888875 466789853 32221 1222222 489999999
Q ss_pred CChH
Q 022865 273 GNVS 276 (291)
Q Consensus 273 g~~~ 276 (291)
|.+.
T Consensus 247 sa~~ 250 (414)
T COG0373 247 SAPH 250 (414)
T ss_pred CCCc
Confidence 9753
No 271
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.076 Score=46.05 Aligned_cols=81 Identities=23% Similarity=0.307 Sum_probs=50.0
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhh-HHH----HHhcCC-C-EEe--CCCCCCchHHHHHHhh
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKK-FDR----AKNFGV-T-EFV--NPKDHDKPIQQVLVDL 260 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~g-~~~v~~~~~~~~~-~~~----~~~~ga-~-~~i--~~~~~~~~~~~~v~~~ 260 (291)
+..++++||+|+ |++|...++-+...| + +|+.+++++++ ++. +++.+. + +++ |..+ ..+..+.+.+.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHHH
Confidence 456789999988 999999887666664 7 89898887765 332 223332 1 222 2222 23333334433
Q ss_pred cC-CCccEEEEcCCC
Q 022865 261 TD-GGVDYSFECIGN 274 (291)
Q Consensus 261 ~~-gg~d~v~d~~g~ 274 (291)
.. +++|+++++.|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 22 479999988775
No 272
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.86 E-value=0.18 Score=37.93 Aligned_cols=84 Identities=21% Similarity=0.241 Sum_probs=58.4
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHH
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 277 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~ 277 (291)
|+|+|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++.-+.. -.+.+++..-..++.++-+++++..
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~---~~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDAT---DPEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TT---SHHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccch---hhhHHhhcCccccCEEEEccCCHHH
Confidence 5788999999999999999665 899999999999999988853 4433321 2234444432379999999888664
Q ss_pred HHHHHHHhh
Q 022865 278 MRAALECCH 286 (291)
Q Consensus 278 ~~~~~~~l~ 286 (291)
-..+...++
T Consensus 76 n~~~~~~~r 84 (116)
T PF02254_consen 76 NLLIALLAR 84 (116)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444444
No 273
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.098 Score=45.26 Aligned_cols=78 Identities=21% Similarity=0.285 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCC-EEeCCCC-CCchHHHHHHhhcCCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVT-EFVNPKD-HDKPIQQVLVDLTDGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~----ga~-~~i~~~~-~~~~~~~~v~~~~~gg~ 265 (291)
+++++||.|+ +++|...++.+...|+ +|+.+++++++.+.+. ++ +.. ..+..+- +..++.+.+... +.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~i 82 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDI 82 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCC
Confidence 4689999988 9999999988888999 8999988887665432 12 222 1222211 122333333322 479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|++.|.
T Consensus 83 d~lv~~ag~ 91 (259)
T PRK06125 83 DILVNNAGA 91 (259)
T ss_pred CEEEECCCC
Confidence 999999874
No 274
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.061 Score=46.45 Aligned_cols=78 Identities=28% Similarity=0.365 Sum_probs=49.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCC--EEe--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT--EFV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~--~~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. .+... +.+ |..+ ..++...+.+.. .+++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 468999988 9999998888778898 8999988887765443 33211 122 2222 123333333322 13699
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
No 275
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=95.85 E-value=0.067 Score=47.61 Aligned_cols=36 Identities=14% Similarity=0.258 Sum_probs=30.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
++++++|+|+|+.+.+++..+..+|+++|+++.+++
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 567999999999999877777778998999999985
No 276
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.85 E-value=0.052 Score=47.81 Aligned_cols=79 Identities=20% Similarity=0.276 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCC---E---EeCCCCCCc---hHHHHHHh
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT---E---FVNPKDHDK---PIQQVLVD 259 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~---~---~i~~~~~~~---~~~~~v~~ 259 (291)
.++++||.|+ .++|.+.+..+...|+ +|+.+++++++++...+ .+.. . ..|... ++ +..+...+
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK-EVDVEKLVEFAVE 84 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC-HHHHHHHHHHHHH
Confidence 5788999987 9999999999999999 89999999887655532 2221 1 222222 12 22223333
Q ss_pred hcCCCccEEEEcCCC
Q 022865 260 LTDGGVDYSFECIGN 274 (291)
Q Consensus 260 ~~~gg~d~v~d~~g~ 274 (291)
...|++|++++..|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 334589999998885
No 277
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.85 E-value=0.069 Score=48.68 Aligned_cols=34 Identities=35% Similarity=0.422 Sum_probs=30.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
..+|+|+|+|++|..+++.+..+|..+++.+|.+
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3679999999999999999999999999999886
No 278
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.82 E-value=0.06 Score=46.66 Aligned_cols=77 Identities=22% Similarity=0.268 Sum_probs=49.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCCEEeCCCC-CCchHHHHHHhhc--CCCccEE
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTEFVNPKD-HDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~~~i~~~~-~~~~~~~~v~~~~--~gg~d~v 268 (291)
++||+|+ +++|...++.+...|+ +|+.+++++++++.+. + .+....+..+- +..++.+.+.+.. .+++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899987 9999998888888899 8999988887654432 2 22222222221 1233444444322 2479999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|++.|.
T Consensus 81 i~naG~ 86 (259)
T PRK08340 81 VWNAGN 86 (259)
T ss_pred EECCCC
Confidence 999884
No 279
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.82 E-value=0.079 Score=44.51 Aligned_cols=46 Identities=43% Similarity=0.609 Sum_probs=39.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga 240 (291)
+|.+++|+|.|.+|..+++.+...|+ +|++++.++++++.+. .+++
T Consensus 27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~ 73 (200)
T cd01075 27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGA 73 (200)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCC
Confidence 57899999999999999999999999 8999999988776654 4454
No 280
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=95.82 E-value=0.013 Score=49.57 Aligned_cols=97 Identities=21% Similarity=0.271 Sum_probs=62.5
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHH----hcCCCEEeCCCCCCchHHHHHHhh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~-~v~~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~v~~~ 260 (291)
+.....+++|++||-+|+|. |+.++.+++..|.. +|+.++..++-.+.++ +++.+.+.....+ .. ..+ .
T Consensus 64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd-g~--~g~--~ 137 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD-GS--EGW--P 137 (209)
T ss_dssp HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES--GG--GTT--G
T ss_pred HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc-hh--hcc--c
Confidence 45667799999999999876 89999999988743 6999999987666554 3455432111111 00 001 1
Q ss_pred cCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 261 TDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 261 ~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
..+.||.|+-+.+.+..-...++.|+++
T Consensus 138 ~~apfD~I~v~~a~~~ip~~l~~qL~~g 165 (209)
T PF01135_consen 138 EEAPFDRIIVTAAVPEIPEALLEQLKPG 165 (209)
T ss_dssp GG-SEEEEEESSBBSS--HHHHHTEEEE
T ss_pred cCCCcCEEEEeeccchHHHHHHHhcCCC
Confidence 1237999999888777677888889988
No 281
>PRK09186 flagellin modification protein A; Provisional
Probab=95.81 E-value=0.058 Score=46.43 Aligned_cols=78 Identities=22% Similarity=0.422 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc----CCCE--E--eCCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVTE--F--VNPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~----ga~~--~--i~~~~~~~~~~~~v~~~~-- 261 (291)
+++++||+|+ |.+|...+..+...|+ +|+.+.+++++++.+ .++ +... . .|..+ ..++.+.+.+..
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence 4688999988 9999999988888899 888888887765433 222 2221 1 13322 234444444432
Q ss_pred CCCccEEEEcCC
Q 022865 262 DGGVDYSFECIG 273 (291)
Q Consensus 262 ~gg~d~v~d~~g 273 (291)
.+++|+++++.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 246999999985
No 282
>PRK09242 tropinone reductase; Provisional
Probab=95.81 E-value=0.062 Score=46.43 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc-----CCCE-Ee--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTE-FV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~-----ga~~-~i--~~~~~~~~~~~~v~~~~-- 261 (291)
+++++||+|+ |.+|...+..+...|+ +|+.+++++++++... ++ +.+. .+ |..+ ..++.+.+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence 4689999987 9999999988888999 8999888887654432 22 2221 11 2222 233333333322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
-+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 2479999999984
No 283
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.80 E-value=0.063 Score=46.38 Aligned_cols=79 Identities=29% Similarity=0.395 Sum_probs=51.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE-EeCCCC-CCchHHHHHHhhc--CCCccEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d~v 268 (291)
++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +++... .+..+- +..+....+.+.. .+.+|++
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 578999987 9999999988888899 8999988888765543 333211 222111 1233333333322 2379999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
+.+.|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998873
No 284
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.80 E-value=0.059 Score=46.51 Aligned_cols=80 Identities=20% Similarity=0.195 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-EeCCCCC-CchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKDH-DKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i~~~~~-~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+.+. .+..+-. ...+.+.+.+.. .++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4679999988 9999999988888999 888888888654333 3344432 2222211 223333333221 236
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|.+.|.
T Consensus 85 ~d~vi~~ag~ 94 (262)
T PRK13394 85 VDILVSNAGI 94 (262)
T ss_pred CCEEEECCcc
Confidence 8999999874
No 285
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.79 E-value=0.059 Score=47.18 Aligned_cols=78 Identities=24% Similarity=0.313 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~---~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++ .+... .+ |..+ ..++...+.+.. .+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4688999987 9999999988888999 899998887655333 22 23221 22 2221 223333333322 24
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
++|++|+++|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999988
No 286
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.79 E-value=0.077 Score=47.06 Aligned_cols=79 Identities=24% Similarity=0.310 Sum_probs=56.1
Q ss_pred CCCCEEEEEcC-ChHHHH-HHHHHHHcCCCeEEEEcCChhhHHHHH-----hcCCCE---EeCCCCCCchHHHHHHhhcC
Q 022865 193 EPGSIVAVFGL-GTVGLA-VAEGAKAAGASRVIGIDIDPKKFDRAK-----NFGVTE---FVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~-ai~~a~~~g~~~v~~~~~~~~~~~~~~-----~~ga~~---~i~~~~~~~~~~~~v~~~~~ 262 (291)
+-|++.+|.|+ .++|.+ |-++|+ .|. +|+.+.++++|++..+ +.++.- ++|....+. .-+.+++...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence 34689999998 899977 446665 999 8999999999987663 344311 355555333 3455666555
Q ss_pred C-CccEEEEcCCC
Q 022865 263 G-GVDYSFECIGN 274 (291)
Q Consensus 263 g-g~d~v~d~~g~ 274 (291)
+ .+-+.+|++|.
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 5 78899999995
No 287
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.062 Score=46.41 Aligned_cols=80 Identities=19% Similarity=0.281 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hH-HHH---HhcCCCE-EeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KF-DRA---KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~-~~~---~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ +++|...++.+...|+ +|+.++++++ .+ ++. ++.+... .+..+- +..++.+.+.+.. .+
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999987 9999999998888999 8888877643 22 222 2233222 222111 2233444444322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|++|++.|.
T Consensus 86 ~id~li~~ag~ 96 (254)
T PRK06114 86 ALTLAVNAAGI 96 (254)
T ss_pred CCCEEEECCCC
Confidence 79999999884
No 288
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.78 E-value=0.08 Score=45.51 Aligned_cols=35 Identities=40% Similarity=0.512 Sum_probs=30.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|.|++|..++..+-..|..+++.+|.+.
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 35799999999999999999999999999988654
No 289
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.76 E-value=0.066 Score=46.09 Aligned_cols=76 Identities=20% Similarity=0.296 Sum_probs=50.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCE-Ee--CCCCCCchHHHHHHhhc--CCCccEEE
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVDYSF 269 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~d~v~ 269 (291)
+++|+|+ |.+|...+..+...|+ +|+++++++++++.+.+ ++... .+ |..+ ..++.+.+.+.. .+++|.++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 6889987 9999999988888899 89999998887665533 34322 22 2222 233334444322 23799999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
.+.|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98874
No 290
>PRK06398 aldose dehydrogenase; Validated
Probab=95.75 E-value=0.036 Score=48.18 Aligned_cols=74 Identities=22% Similarity=0.289 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE-EeCCCCCCchHHHHHHhhc--CCCccEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~-~i~~~~~~~~~~~~v~~~~--~gg~d~v~ 269 (291)
+++++||+|+ +++|...+..+...|+ +|+.+++++++.. .... ..|..+ ..++.+.+.+.. .+.+|++|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN-KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4679999988 9999999998888999 8998887765422 1111 123322 233444444332 24799999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
++.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98873
No 291
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=95.75 E-value=0.046 Score=46.06 Aligned_cols=96 Identities=17% Similarity=0.150 Sum_probs=63.4
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCC---EEeCCCCCCchHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVL 257 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~---~~i~~~~~~~~~~~~v 257 (291)
+.....++++++||=+|+|. |..++.+++..+ ..+|++++.+++-.+.+++ .+.. .++..+. .+.+
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~-----~~~~ 137 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG-----KRGL 137 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc-----ccCC
Confidence 34556678899999998866 888888888774 3389999999987766643 3432 1222111 0111
Q ss_pred HhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 258 VDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 258 ~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
. ..+.||.|+-+..........++.|+++|
T Consensus 138 ~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG 167 (205)
T PRK13944 138 E--KHAPFDAIIVTAAASTIPSALVRQLKDGG 167 (205)
T ss_pred c--cCCCccEEEEccCcchhhHHHHHhcCcCc
Confidence 1 12379998877666666777888999983
No 292
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.74 E-value=0.072 Score=46.10 Aligned_cols=35 Identities=34% Similarity=0.484 Sum_probs=30.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|..+++.+..+|..+++.+|.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 36899999999999999999999999998877654
No 293
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.74 E-value=0.065 Score=47.64 Aligned_cols=121 Identities=25% Similarity=0.282 Sum_probs=66.7
Q ss_pred ccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 157 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 157 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
....+++.+++-+- ......|.+-.-.....++++.++|=+|+|. |.++|..+ .+|+.+|+++|.++-..+.++
T Consensus 129 ~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le~~~~~g~~vlDvGcGS-GILaIAa~-kLGA~~v~g~DiDp~AV~aa~ 202 (300)
T COG2264 129 DELNIELDPGLAFG----TGTHPTTSLCLEALEKLLKKGKTVLDVGCGS-GILAIAAA-KLGAKKVVGVDIDPQAVEAAR 202 (300)
T ss_pred CceEEEEccccccC----CCCChhHHHHHHHHHHhhcCCCEEEEecCCh-hHHHHHHH-HcCCceEEEecCCHHHHHHHH
Confidence 46667777666332 2223333332111223356888888888865 77777655 568879999999997766665
Q ss_pred h----cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC---hHHHHHHHHHhhcc
Q 022865 237 N----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN---VSVMRAALECCHKV 288 (291)
Q Consensus 237 ~----~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~---~~~~~~~~~~l~~~ 288 (291)
+ .+....+... .........++.||+|+-.+=. ..........++++
T Consensus 203 eNa~~N~v~~~~~~~-----~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg 256 (300)
T COG2264 203 ENARLNGVELLVQAK-----GFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG 256 (300)
T ss_pred HHHHHcCCchhhhcc-----cccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC
Confidence 4 2333211011 0011122223589988865432 23345555666776
No 294
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.71 E-value=0.078 Score=45.73 Aligned_cols=79 Identities=20% Similarity=0.319 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~---~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ +.+|...++.+...|+ +|+.+++++++++.+ .+ .+... .+ |..+ ..++.+.+.+.. .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhcC
Confidence 4678999987 9999999888888898 899998887765433 22 23221 22 2222 233333343322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 295
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.07 Score=46.72 Aligned_cols=77 Identities=19% Similarity=0.237 Sum_probs=49.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCC--C-EEe--CCCCCCchHHHHHHhhc--C
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGV--T-EFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga--~-~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
++++||+|+ |.+|...+..+...|+ +|+++++++++.+...+ .+. . ..+ |..+ ..++.+ +.+.. .
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKEI 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHhc
Confidence 568999988 9999999988888899 89998888776544422 221 1 122 2222 233333 43322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 478999999874
No 296
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.71 E-value=0.1 Score=43.33 Aligned_cols=76 Identities=26% Similarity=0.302 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCCEE-eCCCCCCchHHHHHHhhcCCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTEF-VNPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~----ga~~~-i~~~~~~~~~~~~v~~~~~gg~d 266 (291)
++.+++|+|+ |.+|..++..+...|+ +|+.+.++.++.+.+. .+ +.... .+..+ ..+..+.+ .++|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~-----~~~d 99 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-DAARAAAI-----KGAD 99 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-HHHHHHHH-----hcCC
Confidence 5678999987 9999988888878887 8999888887765443 22 22211 11111 11222222 2589
Q ss_pred EEEEcCCChH
Q 022865 267 YSFECIGNVS 276 (291)
Q Consensus 267 ~v~d~~g~~~ 276 (291)
+||.+++...
T Consensus 100 iVi~at~~g~ 109 (194)
T cd01078 100 VVFAAGAAGV 109 (194)
T ss_pred EEEECCCCCc
Confidence 9999887544
No 297
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.052 Score=46.04 Aligned_cols=73 Identities=25% Similarity=0.303 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe--CCCCCCchHHHHHHhhcCC-CccEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV--NPKDHDKPIQQVLVDLTDG-GVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i--~~~~~~~~~~~~v~~~~~g-g~d~v~ 269 (291)
++++++|+|+ |.+|...++.+...|+ +|+.++++.++ .+.. +++ |..+ ..++.+.+.+.... ++|++|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~-~~~~~D~~~-~~~~~~~~~~~~~~~~~d~vi 73 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPG-ELFACDLAD-IEQTAATLAQINEIHPVDAIV 73 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCc-eEEEeeCCC-HHHHHHHHHHHHHhCCCcEEE
Confidence 3578999988 9999999988888898 89998887654 1211 222 2222 23344444443332 689999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
.+.|.
T Consensus 74 ~~ag~ 78 (234)
T PRK07577 74 NNVGI 78 (234)
T ss_pred ECCCC
Confidence 99874
No 298
>PRK06720 hypothetical protein; Provisional
Probab=95.70 E-value=0.086 Score=43.03 Aligned_cols=80 Identities=26% Similarity=0.250 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-H---hcCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~---~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
++++++|.|+ +++|...+..+...|+ +|+.++++++..+.+ + +.+... .+..+- +..++.+.+.+.. -++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5678999987 8899998888878898 899988877654332 2 234322 222221 1123333333221 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 94 iDilVnnAG~ 103 (169)
T PRK06720 94 IDMLFQNAGL 103 (169)
T ss_pred CCEEEECCCc
Confidence 9999999884
No 299
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.072 Score=46.57 Aligned_cols=79 Identities=24% Similarity=0.366 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc---C--CC-EEe--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---G--VT-EFV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~---g--a~-~~i--~~~~~~~~~~~~v~~~~-- 261 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.. .++ + .. .++ |..+ ..+....+.+..
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4678999998 9999999999988999 899998887664433 222 1 11 122 2222 233333344332
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++|.+.|.
T Consensus 84 ~~~~d~li~~ag~ 96 (276)
T PRK05875 84 HGRLHGVVHCAGG 96 (276)
T ss_pred cCCCCEEEECCCc
Confidence 2378999999873
No 300
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.69 E-value=0.034 Score=44.56 Aligned_cols=79 Identities=20% Similarity=0.228 Sum_probs=48.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC--hhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID--PKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~--~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
+++||+|+ +++|...++.+-..|..+|+.+.++ .++.+.+ +..+... ++..+- +..++...+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 47899987 9999998877777777688888888 3433322 3334322 222221 1234444444433 237
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999885
No 301
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.68 E-value=0.08 Score=42.07 Aligned_cols=74 Identities=19% Similarity=0.212 Sum_probs=48.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhcCCCE-EeCCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~-~~~~ga~~-~i~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
.++.+++|+|.|.+|...++.+...|..+|++++++.++.+. +++++... ..... +..+. -.++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL----DLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec----chhhc-----cccCCEEEe
Confidence 456789999999999999988888875489999998877654 44555421 01111 11111 136888888
Q ss_pred cCCCh
Q 022865 271 CIGNV 275 (291)
Q Consensus 271 ~~g~~ 275 (291)
|++..
T Consensus 88 ~~~~~ 92 (155)
T cd01065 88 TTPVG 92 (155)
T ss_pred CcCCC
Confidence 87764
No 302
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.075 Score=45.54 Aligned_cols=77 Identities=17% Similarity=0.306 Sum_probs=49.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-c-----CCC-EEe--CCCCCCchHHHHHHhhc--C
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F-----GVT-EFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~-----ga~-~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++|+|+ |.+|...++.+...|+ +|+.+++++++++.+.+ + +.. .++ |..+ ..++.+.+.+.. .
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 468999987 9999988877777898 88888888876654422 1 211 122 3222 234444444332 2
Q ss_pred CCccEEEEcCC
Q 022865 263 GGVDYSFECIG 273 (291)
Q Consensus 263 gg~d~v~d~~g 273 (291)
+++|++|.+.|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 37999999987
No 303
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.68 E-value=0.078 Score=46.04 Aligned_cols=35 Identities=34% Similarity=0.474 Sum_probs=30.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|..++..+.+.|..+++.+|.+.
T Consensus 32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 46899999999999999999999998998886553
No 304
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.66 E-value=0.075 Score=45.91 Aligned_cols=80 Identities=21% Similarity=0.288 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCCE-EeCCCC-CCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~--~~~~~~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d 266 (291)
+++++||+|+ |++|.+.++.+...|+ +|+.++..+. ..+.+++.+... .+..+- +..+..+.+.+.. .+++|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4679999988 9999999998888899 8888765442 222333333221 121211 1233334443322 23799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999884
No 305
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.66 E-value=0.078 Score=43.25 Aligned_cols=53 Identities=21% Similarity=0.154 Sum_probs=37.5
Q ss_pred CCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCCEEeCCC
Q 022865 192 VEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPK 247 (291)
Q Consensus 192 ~~~g~~vlI~G~g~-vG~~ai~~a~~~g~~~v~~~~~~~~~~~-~~~~~ga~~~i~~~ 247 (291)
--.+++|+|+|+|. +|..++..++..|+ +|+.+.++.+.+. .+.+ +|.+|...
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~~l~~~l~~--aDiVIsat 95 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTKNLKEHTKQ--ADIVIVAV 95 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCchhHHHHHhh--CCEEEEcC
Confidence 35789999999987 59989999999999 7888877654332 2222 45555443
No 306
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.66 E-value=0.08 Score=45.15 Aligned_cols=80 Identities=20% Similarity=0.171 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
++.++||+|+ |.+|...+..+...|+ +|+..+++.++++.. ..++... .+..+- +..++.+.+.+.. .+++|.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4578999987 9999998888888898 888887777766544 3343322 222111 1223333333322 237999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|.+.|.
T Consensus 84 vi~~ag~ 90 (245)
T PRK12936 84 LVNNAGI 90 (245)
T ss_pred EEECCCC
Confidence 9999884
No 307
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.66 E-value=0.032 Score=46.36 Aligned_cols=91 Identities=15% Similarity=0.074 Sum_probs=57.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhcCCCccE
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~ 267 (291)
++++.+||-+|+|. |..++.+++.....+|+++|.+++..+.+++ .+.+.+.... .+..+ +. . .+.||+
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~---~d~~~-~~-~-~~~fDl 115 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVH---GRAEE-FG-Q-EEKFDV 115 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEe---ccHhh-CC-C-CCCccE
Confidence 44588999998865 6677777766544499999999987766653 4443211111 11111 11 1 347998
Q ss_pred EEEcCC--ChHHHHHHHHHhhccC
Q 022865 268 SFECIG--NVSVMRAALECCHKVS 289 (291)
Q Consensus 268 v~d~~g--~~~~~~~~~~~l~~~g 289 (291)
|+-... -+..++.+.+.|+++|
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpGG 139 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPGG 139 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCCe
Confidence 886432 2466778889999983
No 308
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.66 E-value=0.062 Score=46.22 Aligned_cols=80 Identities=24% Similarity=0.261 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. + .+... .+..+- +..++.+.+.+.. .++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999987 9999998888888898 8999988887654432 2 23221 222221 2233333333322 237
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+||.++|.
T Consensus 82 ~d~vi~~a~~ 91 (258)
T PRK12429 82 VDILVNNAGI 91 (258)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 309
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.64 E-value=0.068 Score=46.21 Aligned_cols=79 Identities=20% Similarity=0.251 Sum_probs=49.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCC--EEeCCCC-CCchHHHHHHhhc--CC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVT--EFVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~----~ga~--~~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
++++||+|+ |.+|...+..+...|+ +|+.++++.++.+... + .+.. ..+..+- +..+....+.+.. .+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999988 9999998888888898 8999988876553332 1 2211 1222221 1233333343332 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++++.|.
T Consensus 81 ~id~vv~~ag~ 91 (259)
T PRK12384 81 RVDLLVYNAGI 91 (259)
T ss_pred CCCEEEECCCc
Confidence 79999999873
No 310
>PRK14967 putative methyltransferase; Provisional
Probab=95.63 E-value=0.12 Score=44.01 Aligned_cols=47 Identities=28% Similarity=0.394 Sum_probs=37.5
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 189 ~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
...++++++||-+|+|. |..++.+++. +..+|+++|.+++.++.+++
T Consensus 31 ~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~ 77 (223)
T PRK14967 31 AEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARL 77 (223)
T ss_pred hcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHH
Confidence 34567889999999987 8888888875 55589999999988876654
No 311
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.63 E-value=0.087 Score=45.09 Aligned_cols=90 Identities=23% Similarity=0.247 Sum_probs=60.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE--eCCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~--i~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
-+|.+||=+|+|+ |+++.-+| .+|+ +|+++|.+++-.+.++......- ++|.. ...+.+.+. ++.||+|+.
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~---~~~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ---ATVEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchh---hhHHHHHhc-CCCccEEEE
Confidence 4778888888865 67776666 5677 99999999999999875433222 33432 223333332 148999876
Q ss_pred -----cCCChH-HHHHHHHHhhccC
Q 022865 271 -----CIGNVS-VMRAALECCHKVS 289 (291)
Q Consensus 271 -----~~g~~~-~~~~~~~~l~~~g 289 (291)
.+.++. .+..+.++++|+|
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~G 155 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPGG 155 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCCc
Confidence 556554 5677788888883
No 312
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.62 E-value=0.12 Score=44.38 Aligned_cols=35 Identities=34% Similarity=0.356 Sum_probs=30.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|..++..+..+|..+++.+|.+.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ 55 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDV 55 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 46899999999999999999999999998885543
No 313
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.62 E-value=0.071 Score=45.60 Aligned_cols=80 Identities=21% Similarity=0.223 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhcC--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLTD--GG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~~--gg 264 (291)
.++++||+|+ |.+|...+..+...|+ +|++++++.++.... ++.+... .+..+- +..++.+.+.+... +.
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 3578999987 9999998888888898 899998886554322 2223221 222111 12333333333221 36
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+||.+.|.
T Consensus 84 ~d~vi~~ag~ 93 (251)
T PRK12826 84 LDILVANAGI 93 (251)
T ss_pred CCEEEECCCC
Confidence 8999999864
No 314
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.62 E-value=0.13 Score=40.51 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=28.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
+|+|+|+|++|...+..+...|.++++.+|.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48899999999999999999999889998766
No 315
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.62 E-value=0.074 Score=47.78 Aligned_cols=71 Identities=20% Similarity=0.196 Sum_probs=48.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe-CCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i-~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+|+|+|+ |-+|...+..+...|+ +|++++++.++.......+.+.+. |..+ ..+ +.+... ++|+||++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d-~~~----l~~al~-g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL-PET----LPPSFK-GVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC-HHH----HHHHHC-CCCEEEECCCC
Confidence 6899998 9999999988888898 899988887766555555553322 2221 122 333222 58999998763
No 316
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.61 E-value=0.073 Score=49.25 Aligned_cols=35 Identities=29% Similarity=0.259 Sum_probs=31.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
...+|+|+|+|++|..++..+..+|..+++.+|.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45689999999999999999999999999999887
No 317
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.61 E-value=0.08 Score=45.35 Aligned_cols=79 Identities=18% Similarity=0.188 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. +.+... .+..+- +..++.+.+.... .++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 9999999988888898 8999888877654432 222222 222221 1223333333322 237
Q ss_pred ccEEEEcCC
Q 022865 265 VDYSFECIG 273 (291)
Q Consensus 265 ~d~v~d~~g 273 (291)
+|++|.+.|
T Consensus 81 ~d~vi~~ag 89 (250)
T TIGR03206 81 VDVLVNNAG 89 (250)
T ss_pred CCEEEECCC
Confidence 899999987
No 318
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.58 E-value=0.088 Score=45.40 Aligned_cols=79 Identities=19% Similarity=0.357 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++++|+|+ +.+|...+..+...|+ +|+.+++++++++.+ ++.+... .+ |..+ ..++.+.+.+.. .+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5789999988 9999998888778899 899998887664432 2233222 22 2222 233333443332 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|.+|.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 78999999884
No 319
>PRK06484 short chain dehydrogenase; Validated
Probab=95.58 E-value=0.065 Score=51.53 Aligned_cols=80 Identities=26% Similarity=0.349 Sum_probs=54.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCc
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
..++++||+|+ +++|+..++.+...|+ +|+.+++++++++.+. +++... .+ |..+ ..+..+.+.+.. .+.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 35788999987 9999999988888999 8999999888776554 344332 12 2222 233333343332 2479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|++.|.
T Consensus 345 d~li~nAg~ 353 (520)
T PRK06484 345 DVLVNNAGI 353 (520)
T ss_pred CEEEECCCC
Confidence 999999884
No 320
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.075 Score=46.47 Aligned_cols=76 Identities=22% Similarity=0.278 Sum_probs=48.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE----EeCCCCCCchHHHHHHhhc--CCCc
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE----FVNPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~----~i~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
+++|+|+ |++|...++.+...|+ +|+.+++++++++.. +..+... ..|..+ ..+..+.+.+.. .+++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCCC
Confidence 6899987 9999999988888898 788888887665433 2233321 123322 223333333322 2379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|++.|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999999884
No 321
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.57 E-value=0.082 Score=45.08 Aligned_cols=79 Identities=18% Similarity=0.236 Sum_probs=50.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
+.+++|.|+ |.+|...+..+...|+ +|+.+++++++.+.. +..+... ++..+- +..++.+.+.+.. .+++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 578999987 9999998888888899 899998887664433 2223222 222221 1233333444322 2379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999999874
No 322
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.56 E-value=0.0084 Score=47.66 Aligned_cols=85 Identities=20% Similarity=0.260 Sum_probs=53.0
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC----CchHHHHHHhhcCCCccEEEEcCC
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~----~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
|+|+|+|.+|...+..++..|. .|..+.+.+ +.+..++.|........+. ....... ....+.+|+||-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999888887777898 899998887 7777766654222111000 0000000 111237999999998
Q ss_pred ChHHHHHHHHHhhc
Q 022865 274 NVSVMRAALECCHK 287 (291)
Q Consensus 274 ~~~~~~~~~~~l~~ 287 (291)
..+ ...+++.+++
T Consensus 77 a~~-~~~~l~~l~~ 89 (151)
T PF02558_consen 77 AYQ-LEQALQSLKP 89 (151)
T ss_dssp GGG-HHHHHHHHCT
T ss_pred ccc-hHHHHHHHhh
Confidence 755 5566666654
No 323
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.55 E-value=0.091 Score=45.76 Aligned_cols=79 Identities=22% Similarity=0.315 Sum_probs=48.3
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCEEe--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||.|+ +++|.+.++.+...|+ +|+.+.+.+...+.++ +++....+ |.. +.++..+.+.+.. .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVA-SDDEINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCC-CHHHHHHHHHHHHHHh
Confidence 4678999983 5899998888888999 7887755443222232 23332222 222 2234444444332 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++++.|-
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 479999999874
No 324
>PRK06484 short chain dehydrogenase; Validated
Probab=95.54 E-value=0.078 Score=50.98 Aligned_cols=79 Identities=22% Similarity=0.314 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE---EeCCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE---FVNPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~---~i~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
+++++||+|+ +++|...++.+...|+ +|+.++++.++++.+ ++++... ..|..+ ..++.+.+.+.. .+++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 5688999987 9999999998889999 899998888876544 4455432 123322 234444444432 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99999874
No 325
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.53 E-value=0.05 Score=45.71 Aligned_cols=34 Identities=38% Similarity=0.561 Sum_probs=30.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
..+|+|+|+|++|..+++.+.+.|..+++.+|.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3679999999999999999999999889999887
No 326
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.51 E-value=0.11 Score=45.80 Aligned_cols=79 Identities=13% Similarity=0.245 Sum_probs=50.3
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHH-HHHhcCCCEEe--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFD-RAKNFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~~---~~~-~~~~~ga~~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ +++|++.++.+...|+ +|+.++++++ +++ +..+++....+ |..+ ..+..+.+.+.. .
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK-PEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4688999987 4899998888888899 8888877742 222 22345543322 3322 233444444332 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+.+|+++++.|.
T Consensus 82 g~iDilVnnAG~ 93 (274)
T PRK08415 82 GKIDFIVHSVAF 93 (274)
T ss_pred CCCCEEEECCcc
Confidence 479999999884
No 327
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.51 E-value=0.1 Score=45.94 Aligned_cols=42 Identities=26% Similarity=0.226 Sum_probs=34.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
.++++++|+|+|++|.+++..+...|+ +|+++++++++.+.+
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~l 156 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEEL 156 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 457889999999999998888888898 899998888775433
No 328
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.088 Score=47.17 Aligned_cols=78 Identities=21% Similarity=0.240 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----------hhHH----HHHhcCCCE-Ee--CCCCCCchHHH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----------KKFD----RAKNFGVTE-FV--NPKDHDKPIQQ 255 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~----------~~~~----~~~~~ga~~-~i--~~~~~~~~~~~ 255 (291)
.++++||+|+ +++|++.++.+...|+ +|+.++++. ++++ .+++.+... .+ |..+ ..+...
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 84 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLV-PEQVRA 84 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCC-HHHHHH
Confidence 4689999988 8999999988888999 888887762 2222 223334322 22 2222 233443
Q ss_pred HHHhhc--CCCccEEEEcC-C
Q 022865 256 VLVDLT--DGGVDYSFECI-G 273 (291)
Q Consensus 256 ~v~~~~--~gg~d~v~d~~-g 273 (291)
.+.+.. -+++|++|+++ |
T Consensus 85 ~~~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 85 LVERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHHHcCCccEEEECCcc
Confidence 443332 24799999998 6
No 329
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.51 E-value=0.086 Score=45.61 Aligned_cols=79 Identities=20% Similarity=0.216 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH---HHhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR---AKNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~---~~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
.++++||+|+ +.+|...++.+...|+ +|+.+.++++..++ ..+.+... .+ |..+ ..++.+.+.+.. .++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999988 9999999988888999 78888776322222 22333321 22 2222 223333333322 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 330
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.50 E-value=0.074 Score=46.96 Aligned_cols=79 Identities=19% Similarity=0.342 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-Ee----CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV----NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i----~~~~~~~~~~~~v~~~~-- 261 (291)
.+++|+|.|+ +++|...+.-.-.+|+ +++.+.+..++++.. ++.+..+ ++ |.. +.++..+.+.+..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs-~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVS-DEESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccC-CHHHHHHHHHHHHHh
Confidence 4688999998 9999887776668888 666666666665555 4455544 22 211 1233444443322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
-|++|+.+|..|-
T Consensus 89 fg~vDvLVNNAG~ 101 (282)
T KOG1205|consen 89 FGRVDVLVNNAGI 101 (282)
T ss_pred cCCCCEEEecCcc
Confidence 3489999998883
No 331
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.1 Score=46.20 Aligned_cols=80 Identities=26% Similarity=0.229 Sum_probs=49.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh---------hhHH-HHHh---cCCCE-Ee--CCCCCCchHHH
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP---------KKFD-RAKN---FGVTE-FV--NPKDHDKPIQQ 255 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~---------~~~~-~~~~---~ga~~-~i--~~~~~~~~~~~ 255 (291)
-+++++||+|+ +++|...++.+...|+ +|+.++++. ++++ .+.+ .+... .+ |..+ ..+..+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD-WDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC-HHHHHH
Confidence 35789999987 9999998888888899 788776553 3322 2222 23322 22 2222 233333
Q ss_pred HHHhhc--CCCccEEEEcCCC
Q 022865 256 VLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 256 ~v~~~~--~gg~d~v~d~~g~ 274 (291)
.+.+.. .+.+|++|++.|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 444332 2479999999884
No 332
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.49 E-value=0.095 Score=45.79 Aligned_cols=79 Identities=19% Similarity=0.263 Sum_probs=47.9
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEEe--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~g---~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|++ ++|.+.++.+...|+ +|+.+++++...+.+++ .+....+ |..+ ..++.+.+.+.. .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhc
Confidence 46889999873 799998888878899 78887776321222222 2222222 2222 233444444432 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+.+|++|++.|.
T Consensus 83 g~iD~linnAg~ 94 (262)
T PRK07984 83 PKFDGFVHSIGF 94 (262)
T ss_pred CCCCEEEECCcc
Confidence 479999999973
No 333
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.48 E-value=0.16 Score=40.96 Aligned_cols=80 Identities=15% Similarity=0.231 Sum_probs=48.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
.+.+|+|+|+|.+|..-++.+...|+ +|++++ ++..+.+.+++.-.. .... + .+..-.++|+||-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~~----~----~~~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQKT----F----SNDDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-Eecc----c----ChhcCCCceEEEECCC
Confidence 56899999999999988888878898 788773 333233334432111 1111 1 1100126899999999
Q ss_pred ChHHHHHHHHHhh
Q 022865 274 NVSVMRAALECCH 286 (291)
Q Consensus 274 ~~~~~~~~~~~l~ 286 (291)
++. .+..+..++
T Consensus 80 d~e-~N~~i~~~a 91 (157)
T PRK06719 80 QHA-VNMMVKQAA 91 (157)
T ss_pred CHH-HHHHHHHHH
Confidence 876 444444443
No 334
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.48 E-value=0.1 Score=45.41 Aligned_cols=79 Identities=19% Similarity=0.235 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEEe--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g--~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||.|+ + ++|.+.++.+...|+ +|+.++++++..+.+ .+++....+ |..+ ..+..+.+.+.. .
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN-PKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC-HHHHHHHHHHHHHHc
Confidence 4678999988 4 799998888778899 788877764222222 233433322 3322 234444444432 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+.+|+++++.|.
T Consensus 85 g~iDilVnnag~ 96 (260)
T PRK06603 85 GSFDFLLHGMAF 96 (260)
T ss_pred CCccEEEEcccc
Confidence 479999998873
No 335
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.45 E-value=0.13 Score=50.90 Aligned_cols=87 Identities=17% Similarity=0.281 Sum_probs=63.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
.++|+|.|.|.+|+..++.++..|. .++++|.++++.+.+++.|.+.++ -+. .-.+.+++.--..+|.++-++++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa---t~~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDA---TRMDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeC---CCHHHHHhcCCCcCCEEEEEeCC
Confidence 3579999999999999999999999 899999999999999998864332 221 11223444322379999999998
Q ss_pred hHHHHHHHHHhh
Q 022865 275 VSVMRAALECCH 286 (291)
Q Consensus 275 ~~~~~~~~~~l~ 286 (291)
+..-......++
T Consensus 475 ~~~n~~i~~~ar 486 (621)
T PRK03562 475 PQTSLQLVELVK 486 (621)
T ss_pred HHHHHHHHHHHH
Confidence 665444444443
No 336
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.45 E-value=0.032 Score=47.33 Aligned_cols=98 Identities=18% Similarity=0.209 Sum_probs=62.6
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~ 260 (291)
+.....++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++ ++.+.+..... +..+.. .
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~---d~~~~~--~ 142 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG---DGTQGW--E 142 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC---CcccCC--c
Confidence 44556788999999998866 7777788887653 369999999987777653 34322111111 110000 0
Q ss_pred cCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 261 TDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 261 ~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
..+.||+|+-............+.|+++ |
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G 171 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEG-G 171 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcC-c
Confidence 1237998886655556677788889998 5
No 337
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.45 E-value=0.1 Score=42.74 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=29.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
+|+|+|+|++|...++.+...|..+++.+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 488999999999999999899998899988775
No 338
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.1 Score=45.74 Aligned_cols=79 Identities=16% Similarity=0.161 Sum_probs=50.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCC-EEeCCCC-CCchHHHHHHhhc--CCCccEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVT-EFVNPKD-HDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~-~~i~~~~-~~~~~~~~v~~~~--~gg~d~v 268 (291)
++++||+|+ |.+|...++.+...|+ +|+.++++.++++.+.+ ++.. ..+..+- +..++.+.+.... .+++|.+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999987 9999998888877898 89999888877655543 2221 1221111 1223333333322 2478999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|.+.|.
T Consensus 82 i~~ag~ 87 (275)
T PRK08263 82 VNNAGY 87 (275)
T ss_pred EECCCC
Confidence 999884
No 339
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.44 E-value=0.22 Score=40.18 Aligned_cols=43 Identities=30% Similarity=0.434 Sum_probs=35.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~ 45 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGA 45 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTE
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhh
Confidence 68899999999998888888899 89999999999888877664
No 340
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.43 E-value=0.16 Score=43.45 Aligned_cols=75 Identities=23% Similarity=0.286 Sum_probs=55.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH--hcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK--NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~--~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+++|+|+|.+|...++.+...|. .|++++.++++.+... ++.. .++.-+. .-.+.++++--..+|+++-++|+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~---t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDA---TDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecC---CCHHHHHhcCCCcCCEEEEeeCC
Confidence 58899999999999999999999 9999999999877733 3544 3443332 22345666533489999999998
Q ss_pred hH
Q 022865 275 VS 276 (291)
Q Consensus 275 ~~ 276 (291)
..
T Consensus 77 d~ 78 (225)
T COG0569 77 DE 78 (225)
T ss_pred CH
Confidence 54
No 341
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.42 E-value=0.14 Score=42.97 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=30.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
..+|+|+|+|++|..++..+-.+|.++++.+|..
T Consensus 21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4679999999999999999999999999998765
No 342
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.40 E-value=0.11 Score=45.16 Aligned_cols=79 Identities=23% Similarity=0.363 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.+++++|+|+ +.+|...+..+...|+ +|+.+++++++++.+. +.+... .+ |..+ ..+..+.+.+.. -+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 5678999987 9999988887778899 7888888877654332 234322 12 2222 223333333322 13
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++.+.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 69999999884
No 343
>PRK07806 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.11 Score=44.44 Aligned_cols=79 Identities=20% Similarity=0.269 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhcC--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLTD-- 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~~-- 262 (291)
+++++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+.+ +..+... .+ |..+ ..++.+.+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 3578999988 9999999988888898 7888777543 33222 2223221 22 3222 2333333333221
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++.+.|.
T Consensus 83 ~~~d~vi~~ag~ 94 (248)
T PRK07806 83 GGLDALVLNASG 94 (248)
T ss_pred CCCcEEEECCCC
Confidence 368999988764
No 344
>PLN00203 glutamyl-tRNA reductase
Probab=95.39 E-value=0.079 Score=51.00 Aligned_cols=74 Identities=15% Similarity=0.257 Sum_probs=50.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+. +++...+ ..... .+ +.+.. ..+|+||.|++
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~-~d----l~~al-~~aDVVIsAT~ 338 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPL-DE----MLACA-AEADVVFTSTS 338 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecH-hh----HHHHH-hcCCEEEEccC
Confidence 678999999999999999998999878999999988865554 4532111 11100 11 12221 25899999987
Q ss_pred Ch
Q 022865 274 NV 275 (291)
Q Consensus 274 ~~ 275 (291)
.+
T Consensus 339 s~ 340 (519)
T PLN00203 339 SE 340 (519)
T ss_pred CC
Confidence 54
No 345
>PRK00811 spermidine synthase; Provisional
Probab=95.38 E-value=0.091 Score=46.64 Aligned_cols=93 Identities=12% Similarity=0.093 Sum_probs=59.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC--------CEEeCCCCCCchHHHHHHhhcCCC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--------TEFVNPKDHDKPIQQVLVDLTDGG 264 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga--------~~~i~~~~~~~~~~~~v~~~~~gg 264 (291)
.+.++||++|+|. |..+..+++..+..+|++++.+++-.+.++++-. +.-+.... .+..+.+.. ..+.
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~--~Da~~~l~~-~~~~ 150 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI--GDGIKFVAE-TENS 150 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE--CchHHHHhh-CCCc
Confidence 3457899998866 7777778887777799999999999888876421 10010000 123334443 3448
Q ss_pred ccEEEEcCCC----------hHHHHHHHHHhhccC
Q 022865 265 VDYSFECIGN----------VSVMRAALECCHKVS 289 (291)
Q Consensus 265 ~d~v~d~~g~----------~~~~~~~~~~l~~~g 289 (291)
+|+||--... ...++.+.+.|+++|
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gG 185 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDG 185 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCc
Confidence 9988764321 344677788898883
No 346
>PRK08328 hypothetical protein; Provisional
Probab=95.37 E-value=0.096 Score=45.02 Aligned_cols=34 Identities=41% Similarity=0.493 Sum_probs=30.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
..+|+|+|+|++|..++..+..+|..+++.+|.+
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4679999999999999999999999999998744
No 347
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.35 E-value=0.092 Score=46.36 Aligned_cols=78 Identities=22% Similarity=0.268 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH----HHHHhcC-CC-EEeCCCCCCchHH---HHHHhhcCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFG-VT-EFVNPKDHDKPIQ---QVLVDLTDG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~----~~~~~~g-a~-~~i~~~~~~~~~~---~~v~~~~~g 263 (291)
.|+.|||.|+ +++|.+.++-...+|+ +++..|.+++.. +..++.| +. +..|..+ .+++. +.+++.. |
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~-G 113 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEV-G 113 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhc-C
Confidence 5889999987 8999887766667788 787777776533 3334444 21 2334333 23333 3333332 3
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|+++|.+|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 79999999883
No 348
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=95.32 E-value=0.15 Score=49.79 Aligned_cols=76 Identities=17% Similarity=0.222 Sum_probs=56.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
++++|.|.|.+|...++.++..|. .++++|.++++.+.+++.|...+.-.-. -.+.+++..-..+|.++-+++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~----~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAA----NEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCC----CHHHHHhcCccccCEEEEEcCCh
Confidence 578999999999999999999998 8999999999999999887654432211 12334443223789888777764
Q ss_pred H
Q 022865 276 S 276 (291)
Q Consensus 276 ~ 276 (291)
.
T Consensus 493 ~ 493 (558)
T PRK10669 493 Y 493 (558)
T ss_pred H
Confidence 4
No 349
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.31 E-value=0.11 Score=44.76 Aligned_cols=79 Identities=19% Similarity=0.240 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ +.+|...+..+...|+ +|+.+++++++.+.+ ++.+.+. .+ |..+ ..+..+.+.... .+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4689999987 9999999988888899 788887777665433 2223221 22 2222 223333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++.+.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 79999999873
No 350
>PRK06128 oxidoreductase; Provisional
Probab=95.30 E-value=0.099 Score=46.53 Aligned_cols=79 Identities=19% Similarity=0.215 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--h----HHHHHhcCCCEE-e--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--K----FDRAKNFGVTEF-V--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~--~----~~~~~~~ga~~~-i--~~~~~~~~~~~~v~~~~-- 261 (291)
.++++||+|+ |.+|...+..+...|+ +|+.+.++++ . .+.+++.+.... + |..+ ..+..+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHHH
Confidence 4679999987 9999998888888899 7777654332 1 222333443322 2 2222 223333333322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++|++.|.
T Consensus 132 ~g~iD~lV~nAg~ 144 (300)
T PRK06128 132 LGGLDILVNIAGK 144 (300)
T ss_pred hCCCCEEEECCcc
Confidence 2479999999884
No 351
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.30 E-value=0.16 Score=45.52 Aligned_cols=71 Identities=23% Similarity=0.456 Sum_probs=49.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
.+|.|+|.|.+|...+..++..|. .+|+++++++++++.+++.|....+.. +..+.+ ..+|+||.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~-----~~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTT-----SAAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecC-----CHHHHh-----cCCCEEEECCCH
Confidence 579999999999998888888884 379999999998888888775321110 111111 247888888776
Q ss_pred hH
Q 022865 275 VS 276 (291)
Q Consensus 275 ~~ 276 (291)
..
T Consensus 77 ~~ 78 (307)
T PRK07502 77 GA 78 (307)
T ss_pred HH
Confidence 43
No 352
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.29 E-value=0.12 Score=51.70 Aligned_cols=79 Identities=24% Similarity=0.395 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCCE--Ee--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE--FV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~----~ga~~--~i--~~~~~~~~~~~~v~~~~-- 261 (291)
.++++||+|+ |.+|...++.+...|+ +|+.++++.++++... + .+... .+ |..+ ..++.+.+.+..
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence 4688999987 9999999988888899 8999988887655432 2 23211 12 2222 233444444322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++|++.|.
T Consensus 491 ~g~iDilV~nAG~ 503 (676)
T TIGR02632 491 YGGVDIVVNNAGI 503 (676)
T ss_pred cCCCcEEEECCCC
Confidence 2479999999884
No 353
>PLN02366 spermidine synthase
Probab=95.29 E-value=0.12 Score=46.54 Aligned_cols=96 Identities=18% Similarity=0.087 Sum_probs=61.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC-----CchHHHHHHhhcCCCccE
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH-----DKPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~-----~~~~~~~v~~~~~gg~d~ 267 (291)
.+.++||++|+|. |.++..++++-+..+|++++.+++-.++++++-...-...+++ ..+..+.+.+...+.+|+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 4568999998876 6677788888777789999999988888877421100000110 023334454443447997
Q ss_pred EEEcCCC----------hHHHHHHHHHhhccC
Q 022865 268 SFECIGN----------VSVMRAALECCHKVS 289 (291)
Q Consensus 268 v~d~~g~----------~~~~~~~~~~l~~~g 289 (291)
||--... ...++.+.++|+++|
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pgG 200 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPGG 200 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCCc
Confidence 7753322 245778888999984
No 354
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.078 Score=45.84 Aligned_cols=73 Identities=26% Similarity=0.269 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EEe--CCCCCCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFV--NPKDHDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~i--~~~~~~~~~~~~v~~~~--~gg~d~ 267 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++. .+.. ..+ |..+ ..++.+.+.+.. .+++|+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 80 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTT-AEGCAAVARAVLERLGGVDI 80 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4689999987 9999999988888899 899988876532 1111 122 2222 223333333222 237999
Q ss_pred EEEcCC
Q 022865 268 SFECIG 273 (291)
Q Consensus 268 v~d~~g 273 (291)
+|++.|
T Consensus 81 vi~~ag 86 (260)
T PRK06523 81 LVHVLG 86 (260)
T ss_pred EEECCc
Confidence 999987
No 355
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.18 Score=43.08 Aligned_cols=75 Identities=16% Similarity=0.110 Sum_probs=48.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EE--eCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EF--VNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~--i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.+++|+|+ |++|...+..+...|+ +|+.+++++++++.+.+.+.. .. .|..+ ..++.+.+.+.. ...|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~-~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD-HPGTKAALSQLP-FIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC-HHHHHHHHHhcc-cCCCEEEEc
Confidence 46899987 9999988877778899 899999998887666543321 12 22222 234444444432 246777766
Q ss_pred CC
Q 022865 272 IG 273 (291)
Q Consensus 272 ~g 273 (291)
.|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 65
No 356
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.24 E-value=0.32 Score=40.98 Aligned_cols=80 Identities=21% Similarity=0.225 Sum_probs=49.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
.+++|||+|+|.+|..-+..+...|+ +|++++.... .++.+.+.|--..+. ..... .. + .++|+||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~~~~---~d---l--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RCFDA---DI---L--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CCCCH---HH---h--CCcEEEEECC
Confidence 46799999999999999999999999 8888865542 232233333212221 11111 11 1 2689999999
Q ss_pred CChHHHHHHHH
Q 022865 273 GNVSVMRAALE 283 (291)
Q Consensus 273 g~~~~~~~~~~ 283 (291)
+.+..-.....
T Consensus 78 ~d~~ln~~i~~ 88 (205)
T TIGR01470 78 DDEELNRRVAH 88 (205)
T ss_pred CCHHHHHHHHH
Confidence 98754333333
No 357
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.22 E-value=0.13 Score=44.52 Aligned_cols=75 Identities=20% Similarity=0.313 Sum_probs=46.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~-~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.+++++|+|+ |++|...++.+...|+ +|+++++++ ++++.... +....+..+-.+. +.+.+.. +++|++|++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~---~~~~~~~-~~iDilVnn 86 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGKE---ESLDKQL-ASLDVLILN 86 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCCH---HHHHHhc-CCCCEEEEC
Confidence 3578999988 9999999988888999 888887776 33222111 1112221111111 1233332 369999999
Q ss_pred CCC
Q 022865 272 IGN 274 (291)
Q Consensus 272 ~g~ 274 (291)
.|.
T Consensus 87 AG~ 89 (245)
T PRK12367 87 HGI 89 (245)
T ss_pred Ccc
Confidence 884
No 358
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.22 E-value=0.22 Score=44.18 Aligned_cols=82 Identities=21% Similarity=0.362 Sum_probs=53.6
Q ss_pred EEEEEcCChHHHHH-HHHHHHcCCCeEEE-EcCChhh--HHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 197 IVAVFGLGTVGLAV-AEGAKAAGASRVIG-IDIDPKK--FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 197 ~vlI~G~g~vG~~a-i~~a~~~g~~~v~~-~~~~~~~--~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
++.|+|+|.+|... ..+.+.-++ .+.+ ++.++++ +++++++|...... ++...+.+ ..+|+||+++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e~ll~~---~dIDaV~iaT 72 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE------GVDGLLAN---PDIDIVFDAT 72 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC------CHHHHhcC---CCCCEEEECC
Confidence 68899999999754 555554466 5555 4445543 56777888654332 12122221 3699999999
Q ss_pred CChHHHHHHHHHhhcc
Q 022865 273 GNVSVMRAALECCHKV 288 (291)
Q Consensus 273 g~~~~~~~~~~~l~~~ 288 (291)
++....+.+.+++..|
T Consensus 73 p~~~H~e~a~~al~aG 88 (285)
T TIGR03215 73 SAKAHARHARLLAELG 88 (285)
T ss_pred CcHHHHHHHHHHHHcC
Confidence 9988888887776554
No 359
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=95.19 E-value=0.0027 Score=48.79 Aligned_cols=42 Identities=24% Similarity=0.415 Sum_probs=28.3
Q ss_pred cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC--ChHHHHHHHHHhhcc
Q 022865 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG--NVSVMRAALECCHKV 288 (291)
Q Consensus 238 ~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g--~~~~~~~~~~~l~~~ 288 (291)
+||+++++|+. .++ ...+++|+|||++| .+..+..++++| ++
T Consensus 1 LGAd~vidy~~--~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~ 44 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG 44 (127)
T ss_dssp CT-SEEEETTC--SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE
T ss_pred CCcCEEecCCC--ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC
Confidence 68999999985 444 22348999999999 655556666777 66
No 360
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.19 E-value=0.15 Score=43.23 Aligned_cols=94 Identities=21% Similarity=0.190 Sum_probs=57.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEEeC-------CCCCCch-HHHHHHhhc-
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVN-------PKDHDKP-IQQVLVDLT- 261 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~i~-------~~~~~~~-~~~~v~~~~- 261 (291)
+.++.+||+.|+|. |.-++-+| ..|+ .|+++|.++.-++.+ ++.+...... +.....+ ....+.++.
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA-~~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLA-EQGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHH-hCCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 35678999999876 77788887 4799 999999999988765 2333211000 0000000 000011111
Q ss_pred --CCCccEEEEcCC--------ChHHHHHHHHHhhcc
Q 022865 262 --DGGVDYSFECIG--------NVSVMRAALECCHKV 288 (291)
Q Consensus 262 --~gg~d~v~d~~g--------~~~~~~~~~~~l~~~ 288 (291)
.+.||.|+|+.- .+..++...++|+++
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg 145 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG 145 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC
Confidence 236899999753 134577888999998
No 361
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.18 E-value=0.047 Score=46.72 Aligned_cols=36 Identities=33% Similarity=0.476 Sum_probs=31.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
+..+|+|+|.|++|.+++..+-+.|+.+++.+|-++
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~ 64 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDD 64 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEeccc
Confidence 346899999999999999999999999988877554
No 362
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.16 E-value=0.23 Score=45.59 Aligned_cols=35 Identities=31% Similarity=0.341 Sum_probs=31.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|..+++.+..+|.++++.+|.+.
T Consensus 28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 46899999999999999999999999999988764
No 363
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=95.16 E-value=0.16 Score=46.80 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
...+|+|+|+|++|..++..+...|..+++.+|.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 34689999999999999999999999899998876
No 364
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.15 E-value=0.14 Score=47.50 Aligned_cols=80 Identities=20% Similarity=0.309 Sum_probs=49.8
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-------HHHhc-CCCEE-eCCCCCCchHHHHHHhhc
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-------RAKNF-GVTEF-VNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~-------~~~~~-ga~~~-i~~~~~~~~~~~~v~~~~ 261 (291)
-..+.+|||+|+ |.+|...+..+...|+ +|++++++.++.+ ..... ++..+ .|..+ ...+.+.+...
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~~- 133 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFSE- 133 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHHh-
Confidence 345678999988 9999999988888898 8999888765431 11112 22222 12222 23333333332
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
+.++|+||+|++.
T Consensus 134 ~~~~D~Vi~~aa~ 146 (390)
T PLN02657 134 GDPVDVVVSCLAS 146 (390)
T ss_pred CCCCcEEEECCcc
Confidence 1169999999874
No 365
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.14 E-value=0.17 Score=49.84 Aligned_cols=86 Identities=13% Similarity=0.183 Sum_probs=63.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
.+|+|.|.|.+|...++.++..|. .++++|.++++.+.+++.|...++ -+. .-.+.+++..-..+|.++-+++++
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa---t~~~~L~~agi~~A~~vv~~~~d~ 475 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYY-GDA---TQLELLRAAGAEKAEAIVITCNEP 475 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEE-eeC---CCHHHHHhcCCccCCEEEEEeCCH
Confidence 578999999999999999999999 899999999999999998864333 221 122334443333799999999987
Q ss_pred HHHHHHHHHhh
Q 022865 276 SVMRAALECCH 286 (291)
Q Consensus 276 ~~~~~~~~~l~ 286 (291)
..-......++
T Consensus 476 ~~n~~i~~~~r 486 (601)
T PRK03659 476 EDTMKIVELCQ 486 (601)
T ss_pred HHHHHHHHHHH
Confidence 65545544444
No 366
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.19 Score=42.92 Aligned_cols=77 Identities=19% Similarity=0.218 Sum_probs=47.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCC-EEeCCCC-CCchHHHHHHhhcCCCccE
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVT-EFVNPKD-HDKPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~----ga~-~~i~~~~-~~~~~~~~v~~~~~gg~d~ 267 (291)
++++|+|+ |.+|...++.+...|+ +|+++++++++.+... ++ +.. .++..+- +..+..+.+.+.. ..+|+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~ 79 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDI 79 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCE
Confidence 47899987 9999998888888898 8999988887654332 21 111 1222211 1223333333332 25799
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
++.+.|.
T Consensus 80 vv~~ag~ 86 (243)
T PRK07102 80 VLIAVGT 86 (243)
T ss_pred EEECCcC
Confidence 9988774
No 367
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.11 E-value=0.056 Score=45.19 Aligned_cols=91 Identities=16% Similarity=0.224 Sum_probs=56.1
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCCEEeCCCCCCchHHHHHHhh-cC
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDL-TD 262 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~~~i~~~~~~~~~~~~v~~~-~~ 262 (291)
......++.+||-+|+|. |..+..+++. |. +|+++|.+++-++.+++. +...+ .... .++ .+. ..
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~--~d~----~~~~~~ 93 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV--VDL----NNLTFD 93 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe--cCh----hhCCcC
Confidence 334455678899998876 7777888864 77 999999999876666542 22111 0000 111 111 12
Q ss_pred CCccEEEEcCC----C----hHHHHHHHHHhhcc
Q 022865 263 GGVDYSFECIG----N----VSVMRAALECCHKV 288 (291)
Q Consensus 263 gg~d~v~d~~g----~----~~~~~~~~~~l~~~ 288 (291)
+.||+|+.+.. . ...+....+.|+++
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg 127 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG 127 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC
Confidence 36999987533 1 35566777778888
No 368
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.10 E-value=0.14 Score=39.79 Aligned_cols=90 Identities=16% Similarity=0.264 Sum_probs=57.7
Q ss_pred EEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhh---HHHHHhcCCCEEeCCCCCCc-hH----------------H
Q 022865 198 VAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKK---FDRAKNFGVTEFVNPKDHDK-PI----------------Q 254 (291)
Q Consensus 198 vlI~G~-g~vG~~ai~~a~~~g--~~~v~~~~~~~~~---~~~~~~~ga~~~i~~~~~~~-~~----------------~ 254 (291)
|.|+|+ |.+|..+..+.+... + +|+++.....- .+.+++|....+...+.... .+ .
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 578898 999999999999997 6 77776554432 34557788877766543110 11 1
Q ss_pred HHHHhhcC-CCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 255 QVLVDLTD-GGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 255 ~~v~~~~~-gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+.++.. ..+|+|+..+.+-..+...+..++.+
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g 114 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG 114 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence 22333333 37999999988777788888887654
No 369
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.09 E-value=0.17 Score=44.34 Aligned_cols=81 Identities=20% Similarity=0.275 Sum_probs=49.8
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHH-HhcCCCEEeCCCC-CCchHHHHHHhhc--C
Q 022865 193 EPGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFDRA-KNFGVTEFVNPKD-HDKPIQQVLVDLT--D 262 (291)
Q Consensus 193 ~~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~---~~~~~~-~~~ga~~~i~~~~-~~~~~~~~v~~~~--~ 262 (291)
-.++++||+|+ +++|++.+..+...|+ +|+.+.+++ ++++.+ ++++....+..+- +..+..+.+.+.. .
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 35688999986 5899998888888999 888776653 333322 3445322222221 2233444444332 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+.+|+++++.|.
T Consensus 87 g~iD~lv~nAG~ 98 (272)
T PRK08159 87 GKLDFVVHAIGF 98 (272)
T ss_pred CCCcEEEECCcc
Confidence 479999999874
No 370
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.08 E-value=0.14 Score=43.92 Aligned_cols=77 Identities=25% Similarity=0.343 Sum_probs=49.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE-Ee--CCCCCCchHHHHHHhhc--CCCc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FV--NPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
+++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ .+... .+ |..+ ..++.+.+.+.. .+++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGGL 79 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCCC
Confidence 57999987 9999999988888899 89999888876654432 22221 12 2222 233333333322 2368
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+||.+.+.
T Consensus 80 d~vi~~a~~ 88 (255)
T TIGR01963 80 DILVNNAGI 88 (255)
T ss_pred CEEEECCCC
Confidence 999988764
No 371
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=95.07 E-value=0.12 Score=45.01 Aligned_cols=79 Identities=22% Similarity=0.290 Sum_probs=46.3
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCC------hhhHHHHHhcCCC-EEe--CCCCCCchHHHHHHhhc
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDID------PKKFDRAKNFGVT-EFV--NPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~------~~~~~~~~~~ga~-~~i--~~~~~~~~~~~~v~~~~ 261 (291)
.+++++|+|+ +++|.+.+..+...|+ +|+.+.++ ++.++.+.+.+.. ..+ |..+ .++..+.+.+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD-DAQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC-HHHHHHHHHHHH
Confidence 4688999986 4899998888888999 77766432 2223222222211 122 2222 233443443332
Q ss_pred --CCCccEEEEcCCC
Q 022865 262 --DGGVDYSFECIGN 274 (291)
Q Consensus 262 --~gg~d~v~d~~g~ 274 (291)
.+++|+++++.|.
T Consensus 83 ~~~g~iD~lv~nag~ 97 (258)
T PRK07370 83 QKWGKLDILVHCLAF 97 (258)
T ss_pred HHcCCCCEEEEcccc
Confidence 2479999999884
No 372
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.99 E-value=0.13 Score=44.97 Aligned_cols=79 Identities=18% Similarity=0.261 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-------H-HH---HHhcCCCE-E--eCCCCCCchHHHHHH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-------F-DR---AKNFGVTE-F--VNPKDHDKPIQQVLV 258 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-------~-~~---~~~~ga~~-~--i~~~~~~~~~~~~v~ 258 (291)
+++++||+|+ |.+|...+..+...|+ +|++++++.++ + +. .++.+... . .|..+ ..++.+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~ 82 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD-EDQVAAAVA 82 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHH
Confidence 4578999988 9999999888888899 88888876532 1 11 12233322 1 23222 233333333
Q ss_pred hhc--CCCccEEEEcCCC
Q 022865 259 DLT--DGGVDYSFECIGN 274 (291)
Q Consensus 259 ~~~--~gg~d~v~d~~g~ 274 (291)
+.. .+.+|++|++.|.
T Consensus 83 ~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 83 KAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 321 1379999999884
No 373
>PRK08618 ornithine cyclodeaminase; Validated
Probab=94.99 E-value=0.19 Score=45.48 Aligned_cols=84 Identities=13% Similarity=0.060 Sum_probs=54.7
Q ss_pred CCCCEEEEEcCChHHHHHHHH-HHHcCCCeEEEEcCChhhHHHHH-h----cCCCEEeCCCCCCchHHHHHHhhcCCCcc
Q 022865 193 EPGSIVAVFGLGTVGLAVAEG-AKAAGASRVIGIDIDPKKFDRAK-N----FGVTEFVNPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~-a~~~g~~~v~~~~~~~~~~~~~~-~----~ga~~~i~~~~~~~~~~~~v~~~~~gg~d 266 (291)
+..++++|+|+|..|.+.+.. +...++++|.++++++++.+.+. + ++.+ +..+. +..+.+ ..+|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~----~~~~~~-----~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN----SADEAI-----EEAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC----CHHHHH-----hcCC
Confidence 456789999999999876654 44668889999999988865443 2 3332 11121 222233 2589
Q ss_pred EEEEcCCChHHHHHHHHHhhcc
Q 022865 267 YSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 267 ~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+|+.|+++.+-+. . +++++|
T Consensus 195 iVi~aT~s~~p~i-~-~~l~~G 214 (325)
T PRK08618 195 IIVTVTNAKTPVF-S-EKLKKG 214 (325)
T ss_pred EEEEccCCCCcch-H-HhcCCC
Confidence 9999999765333 3 666654
No 374
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.98 E-value=0.088 Score=45.72 Aligned_cols=76 Identities=21% Similarity=0.275 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhc--CCCccEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d~v~ 269 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+. .....+ .|..+ ..++.+.+.+.. .+.+|++|
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS-AEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4678999987 9999999988888999 88888877665321 111111 22222 233333343322 24799999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
++.|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 99873
No 375
>PRK06940 short chain dehydrogenase; Provisional
Probab=94.96 E-value=0.19 Score=44.14 Aligned_cols=77 Identities=22% Similarity=0.315 Sum_probs=48.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCCE-Ee--CCCCCCchHHHHHHhhc-CCCcc
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE-FV--NPKDHDKPIQQVLVDLT-DGGVD 266 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~---~ga~~-~i--~~~~~~~~~~~~v~~~~-~gg~d 266 (291)
+++++|.|+|++|...+..+. .|+ +|+.+++++++++.+ ++ .+.+. .+ |..+ ..++.+.+.+.. .+++|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCC
Confidence 357888899999999887774 788 899998887765433 22 23222 22 3222 233444443321 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 79 ~li~nAG~ 86 (275)
T PRK06940 79 GLVHTAGV 86 (275)
T ss_pred EEEECCCc
Confidence 99999984
No 376
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.96 E-value=0.14 Score=43.78 Aligned_cols=80 Identities=16% Similarity=0.211 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~-~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |.+|...+..+...|+ +|+. ..++.++.+.+ +..+... .+..+- +..+....+.+.. .+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4578999988 9999999988888898 6655 45666554332 2234322 221221 2233333333322 23
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999873
No 377
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.94 E-value=0.11 Score=44.44 Aligned_cols=79 Identities=18% Similarity=0.221 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhH----HHHHhcCCCEE---eCCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKF----DRAKNFGVTEF---VNPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~~~~~~~----~~~~~~ga~~~---i~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+ .+.+++. +..++.+.... .|..+ ..++.+.+.+.. .
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 3578899987 9999999988888998 66664 3333322 22223344332 22222 223333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++++.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 479999999885
No 378
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.87 E-value=0.16 Score=38.43 Aligned_cols=81 Identities=20% Similarity=0.287 Sum_probs=56.6
Q ss_pred EEEEEcCChHHHHHHHHHHHc--CCCeEE-EEcCChhhHHH-HHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAA--GASRVI-GIDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~--g~~~v~-~~~~~~~~~~~-~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
++.|+|.|.+|......++.. +. +++ +++.++++.+. +++++.+ .+. ++.+.+.. ..+|+|+-++
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~~------~~~~ll~~---~~~D~V~I~t 70 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VYT------DLEELLAD---EDVDAVIIAT 70 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EES------SHHHHHHH---TTESEEEEES
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-chh------HHHHHHHh---hcCCEEEEec
Confidence 588999999998877666555 45 555 47777777665 4567776 221 23333433 2699999999
Q ss_pred CChHHHHHHHHHhhcc
Q 022865 273 GNVSVMRAALECCHKV 288 (291)
Q Consensus 273 g~~~~~~~~~~~l~~~ 288 (291)
.+......+.++++.+
T Consensus 71 p~~~h~~~~~~~l~~g 86 (120)
T PF01408_consen 71 PPSSHAEIAKKALEAG 86 (120)
T ss_dssp SGGGHHHHHHHHHHTT
T ss_pred CCcchHHHHHHHHHcC
Confidence 9988888888888765
No 379
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.87 E-value=0.19 Score=43.51 Aligned_cols=78 Identities=12% Similarity=0.193 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHH-Hh----cCCC-EEe--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRA-KN----FGVT-EFV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~~~~-~~----~ga~-~~i--~~~~~~~~~~~~v~~~~-- 261 (291)
+++++||+|+ +++|...+..+...|+ +|+.+. +++++++.. ++ .+.. ..+ |..+ ..++.+.+.+..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 5689999988 9999999988888999 777664 444444322 22 2322 122 3222 233333333322
Q ss_pred CCCccEEEEcCC
Q 022865 262 DGGVDYSFECIG 273 (291)
Q Consensus 262 ~gg~d~v~d~~g 273 (291)
.+.+|+++++.|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 247999999886
No 380
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=94.86 E-value=0.19 Score=44.51 Aligned_cols=92 Identities=15% Similarity=0.132 Sum_probs=62.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-CEEeCCCCC----CchHHHHHHhhcCCCccEEE-
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TEFVNPKDH----DKPIQQVLVDLTDGGVDYSF- 269 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga-~~~i~~~~~----~~~~~~~v~~~~~gg~d~v~- 269 (291)
++|||+|.|. |-.+-.++|+...+++++++-+++-.++++++-. ......+.+ -.+-.+.+++... +||+||
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 5999997655 6677788999988899999999999999987422 111111110 0234455665544 799554
Q ss_pred EcCCC---------hHHHHHHHHHhhccC
Q 022865 270 ECIGN---------VSVMRAALECCHKVS 289 (291)
Q Consensus 270 d~~g~---------~~~~~~~~~~l~~~g 289 (291)
|++.. +..++.+-++|+++|
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~G 184 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKEDG 184 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCCc
Confidence 55443 577888888898884
No 381
>PRK05855 short chain dehydrogenase; Validated
Probab=94.86 E-value=0.14 Score=49.70 Aligned_cols=79 Identities=23% Similarity=0.282 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.+.++||+|+ |++|...++.+...|+ +|+.++++.++++.+. +.|... .+ |..+ ..+..+.+.+.. .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAEHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4568999987 9999998888888899 7999999887765432 233322 22 2222 233334444332 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|++|+++|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 79999999885
No 382
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.85 E-value=0.23 Score=47.34 Aligned_cols=70 Identities=27% Similarity=0.279 Sum_probs=48.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-----hHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEE
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-----KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~-----~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v 268 (291)
.+++|+|+|+|.+|+.++.+++..|+ +|++++..+. ..+.+++.|......... . ....+|+|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~--------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP---T--------LPEDTDLV 82 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c--------ccCCCCEE
Confidence 46789999999999999999999999 7999886542 223455667654332211 1 01258899
Q ss_pred EEcCCCh
Q 022865 269 FECIGNV 275 (291)
Q Consensus 269 ~d~~g~~ 275 (291)
+-+.|-+
T Consensus 83 v~s~Gi~ 89 (480)
T PRK01438 83 VTSPGWR 89 (480)
T ss_pred EECCCcC
Confidence 9888853
No 383
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=94.84 E-value=0.49 Score=39.78 Aligned_cols=80 Identities=14% Similarity=0.099 Sum_probs=48.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-h-HHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-K-FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~-~-~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.+.+|||+|+|.+|...+..+...|+ +|++++.... . .+++.+ +. ....... +.+. .+ .++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~-i~~~~~~----~~~~--~l--~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK-IRWKQKE----FEPS--DI--VDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC-EEEEecC----CChh--hc--CCceEEEEc
Confidence 46799999999999998888888898 8888765432 2 222222 21 1111111 0000 01 268999999
Q ss_pred CCChHHHHHHHHHh
Q 022865 272 IGNVSVMRAALECC 285 (291)
Q Consensus 272 ~g~~~~~~~~~~~l 285 (291)
++++. ++..+...
T Consensus 78 T~d~e-lN~~i~~~ 90 (202)
T PRK06718 78 TNDPR-VNEQVKED 90 (202)
T ss_pred CCCHH-HHHHHHHH
Confidence 99877 44444433
No 384
>PRK08317 hypothetical protein; Provisional
Probab=94.83 E-value=0.29 Score=41.43 Aligned_cols=96 Identities=24% Similarity=0.293 Sum_probs=63.1
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc----CCCE-EeCCCCCCchHHHHHHh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTE-FVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~~----ga~~-~i~~~~~~~~~~~~v~~ 259 (291)
+.+...+.++++||-+|+|. |..+..+++..+ ..++++++.+++.++.+++. .... ++..+. .. ..
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~--~~-----~~ 82 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA--DG-----LP 82 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc--cc-----CC
Confidence 34566788899999999976 888889988873 34899999999988888664 1111 111111 00 01
Q ss_pred hcCCCccEEEEcC------CChHHHHHHHHHhhccC
Q 022865 260 LTDGGVDYSFECI------GNVSVMRAALECCHKVS 289 (291)
Q Consensus 260 ~~~gg~d~v~d~~------g~~~~~~~~~~~l~~~g 289 (291)
+..+.||+|+... .....++.+.++|+++|
T Consensus 83 ~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG 118 (241)
T PRK08317 83 FPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGG 118 (241)
T ss_pred CCCCCceEEEEechhhccCCHHHHHHHHHHHhcCCc
Confidence 2234788877531 22456888888899883
No 385
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.82 E-value=0.19 Score=43.71 Aligned_cols=79 Identities=22% Similarity=0.352 Sum_probs=48.6
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCC---hhhHHH-HHhcCCCEEe--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDID---PKKFDR-AKNFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~---~~~~~~-~~~~ga~~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|+ +++|++.++.+...|+ +|+.+.+. +++++. .++++....+ |..+ .++..+.+.+.. .
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS-DEQIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC-HHHHHHHHHHHHHHh
Confidence 4688999984 5899998888878899 78776432 333332 2344432222 2222 234444444433 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++++.|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 479999999874
No 386
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=94.81 E-value=0.24 Score=42.81 Aligned_cols=96 Identities=23% Similarity=0.239 Sum_probs=65.8
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~ 260 (291)
+.....+.||++|+=.|.|+ |.+++-+|++.|. .+|+.++..++..+.|++ ++....+.... .+ +.+.
T Consensus 86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~--~D----v~~~ 158 (256)
T COG2519 86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL--GD----VREG 158 (256)
T ss_pred HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe--cc----cccc
Confidence 34578899999998887765 8888899998874 699999999998888853 44433221111 11 2222
Q ss_pred cCC-Ccc-EEEEcCCChHHHHHHHHHhhcc
Q 022865 261 TDG-GVD-YSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 261 ~~g-g~d-~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
..+ .+| +++|.--....++.+.+.|+++
T Consensus 159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg 188 (256)
T COG2519 159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG 188 (256)
T ss_pred ccccccCEEEEcCCChHHHHHHHHHHhCCC
Confidence 222 677 5556655667788888888888
No 387
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.81 E-value=0.17 Score=44.10 Aligned_cols=77 Identities=17% Similarity=0.148 Sum_probs=48.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-EeCCCC-CCchHHHHHHhhc--CCCccE
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
++||+|+ |.+|...+..+...|+ +|+.++++.++++.+. ..+.+. .+..+- +..++.+.+.... .+++|+
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899987 9999998888878899 8888888887654332 223222 221111 1123333333221 247999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 81 lI~~ag~ 87 (270)
T PRK05650 81 IVNNAGV 87 (270)
T ss_pred EEECCCC
Confidence 9999884
No 388
>PRK06701 short chain dehydrogenase; Provisional
Probab=94.81 E-value=0.17 Score=44.86 Aligned_cols=81 Identities=17% Similarity=0.176 Sum_probs=47.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HH----HHHhcCCCE-EeCCCC-CCchHHHHHHhhc--C
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FD----RAKNFGVTE-FVNPKD-HDKPIQQVLVDLT--D 262 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-~~----~~~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~ 262 (291)
-+++++||+|+ |.+|...+..+...|+ +|+.+++++++ .+ .++..+.+. .+..+- +...+.+.+.+.. .
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34678999987 9999998888878898 78887766432 11 122223322 222221 1223333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|.+.|.
T Consensus 123 ~~iD~lI~~Ag~ 134 (290)
T PRK06701 123 GRLDILVNNAAF 134 (290)
T ss_pred CCCCEEEECCcc
Confidence 379999998874
No 389
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.81 E-value=0.19 Score=46.91 Aligned_cols=74 Identities=24% Similarity=0.312 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCC-EEe--CCCCCCchHHHHHHhhcCCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT-EFV--NPKDHDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~-~~i--~~~~~~~~~~~~v~~~~~gg~d~v 268 (291)
++++++|.|+ |++|.+.+..+...|+ +|+++++++++++... +.... ..+ |..+ . +.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd--~---~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ--E---AALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC--H---HHHHHHh-CCCCEE
Confidence 4679999988 9999999888888899 8998888877654322 11111 122 2221 1 2233332 369999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|++.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 998774
No 390
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.81 E-value=0.19 Score=42.81 Aligned_cols=79 Identities=23% Similarity=0.352 Sum_probs=48.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHHHh----cCCCE-EeCCCC-CCchHHHHHHhhcC--CC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRAKN----FGVTE-FVNPKD-HDKPIQQVLVDLTD--GG 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~~~~~~~~~~~~----~ga~~-~i~~~~-~~~~~~~~v~~~~~--gg 264 (291)
++++||+|+ |.+|...+..+...|+ +|+.+ ++++++.+.+.+ .+... ++..+- +..++.+.+.+... ++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 468999987 9999998887777898 78777 887766543322 22211 221111 12233333333221 36
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+||.+.|.
T Consensus 84 id~vi~~ag~ 93 (247)
T PRK05565 84 IDILVNNAGI 93 (247)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 391
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.78 E-value=0.18 Score=43.30 Aligned_cols=78 Identities=17% Similarity=0.175 Sum_probs=48.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCCcc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d 266 (291)
++++|+|+ |.+|...++.+...|+ +|+.+++++++++.. ++.+... .+..+- +..++.+.+.+.. .+.+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 36899987 9999999988888999 888888876654332 2233221 222111 1233333343332 23689
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|.+.|.
T Consensus 80 ~vi~~ag~ 87 (254)
T TIGR02415 80 VMVNNAGV 87 (254)
T ss_pred EEEECCCc
Confidence 99999874
No 392
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.75 E-value=0.72 Score=33.29 Aligned_cols=76 Identities=22% Similarity=0.311 Sum_probs=49.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcC---CCeEE-EEcCChhhHHHH-HhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAG---ASRVI-GIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g---~~~v~-~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
+|.|+|+|.+|.+.+.-....| . +|+ +.++++++.+.+ ++++.. +.. .+..+.+. ..|+||-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~-~~~-----~~~~~~~~-----~advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQ-ATA-----DDNEEAAQ-----EADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTE-EES-----EEHHHHHH-----HTSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccc-ccc-----CChHHhhc-----cCCEEEEE
Confidence 4778899999999888888888 6 777 448999887666 566643 221 12333343 37999999
Q ss_pred CCChHHHHHHHHHh
Q 022865 272 IGNVSVMRAALECC 285 (291)
Q Consensus 272 ~g~~~~~~~~~~~l 285 (291)
+.... +...++.+
T Consensus 69 v~p~~-~~~v~~~i 81 (96)
T PF03807_consen 69 VKPQQ-LPEVLSEI 81 (96)
T ss_dssp S-GGG-HHHHHHHH
T ss_pred ECHHH-HHHHHHHH
Confidence 98755 44444443
No 393
>PRK09135 pteridine reductase; Provisional
Probab=94.74 E-value=0.22 Score=42.46 Aligned_cols=79 Identities=16% Similarity=0.150 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHH----hcCCC--EEe--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAK----NFGVT--EFV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~-~~~~~~~----~~ga~--~~i--~~~~~~~~~~~~v~~~~-- 261 (291)
.++++||+|+ |.+|...+..+...|+ +|++++++. ++.+... ..... ..+ |..+ ..++...+.+..
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD-PDALPELVAACVAA 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4578999988 9999998888888899 888887753 3332221 11111 122 2222 233333333322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|+||.+.|.
T Consensus 83 ~~~~d~vi~~ag~ 95 (249)
T PRK09135 83 FGRLDALVNNASS 95 (249)
T ss_pred cCCCCEEEECCCC
Confidence 2368999999883
No 394
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.71 E-value=0.25 Score=42.31 Aligned_cols=82 Identities=20% Similarity=0.223 Sum_probs=51.4
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE--E--eCCCC-CCchHHHHHHhhc
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE--F--VNPKD-HDKPIQQVLVDLT 261 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~--~--i~~~~-~~~~~~~~v~~~~ 261 (291)
..++++++|.|+ |.+|...++.+...|+ +|+.++++.++.+.+ ++.+... + .+... +..++.+.+....
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 457889999987 9999998888878898 899998887664333 2233221 2 22221 1123333333322
Q ss_pred C--CCccEEEEcCCC
Q 022865 262 D--GGVDYSFECIGN 274 (291)
Q Consensus 262 ~--gg~d~v~d~~g~ 274 (291)
. +.+|.||.+.|.
T Consensus 88 ~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 88 EQFGRLDGVLHNAGL 102 (247)
T ss_pred HHhCCCCEEEECCcc
Confidence 1 379999998764
No 395
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=94.69 E-value=0.28 Score=42.58 Aligned_cols=94 Identities=18% Similarity=0.212 Sum_probs=60.5
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EEeCCCCCCchHHHHHHhhcCCCc
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGV 265 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~i~~~~~~~~~~~~v~~~~~gg~ 265 (291)
.....+.++++||=+|+|. |..+..+++..+..+|+++|.+++-++.+++.-.. .++..+ ... + .....+
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d-----~~~-~--~~~~~f 94 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD-----IAS-W--QPPQAL 94 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc-----hhc-c--CCCCCc
Confidence 3445567888999898865 67777888877544999999999988888754221 122111 110 0 112378
Q ss_pred cEEEEcCC------ChHHHHHHHHHhhccC
Q 022865 266 DYSFECIG------NVSVMRAALECCHKVS 289 (291)
Q Consensus 266 d~v~d~~g------~~~~~~~~~~~l~~~g 289 (291)
|+|+.... ....++.+.+.|+++|
T Consensus 95 D~v~~~~~l~~~~d~~~~l~~~~~~LkpgG 124 (258)
T PRK01683 95 DLIFANASLQWLPDHLELFPRLVSLLAPGG 124 (258)
T ss_pred cEEEEccChhhCCCHHHHHHHHHHhcCCCc
Confidence 98876433 2356778888888883
No 396
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=94.68 E-value=0.13 Score=49.75 Aligned_cols=41 Identities=34% Similarity=0.477 Sum_probs=35.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
.+++++|+|+|++|.+++..+...|+ +|+.++++.++.+.+
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~l 418 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKEL 418 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHH
Confidence 46789999999999999999999999 899998887765554
No 397
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=94.67 E-value=0.35 Score=45.61 Aligned_cols=79 Identities=18% Similarity=0.146 Sum_probs=56.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
+..+++|+|.|.+|...++.+...|. .|++++.++++.+.+++.+.+ .++.-+. .-.+.+.+..-..+|.|+-++
T Consensus 230 ~~~~iiIiG~G~~g~~l~~~L~~~~~-~v~vid~~~~~~~~~~~~~~~~~~i~gd~---~~~~~L~~~~~~~a~~vi~~~ 305 (453)
T PRK09496 230 PVKRVMIVGGGNIGYYLAKLLEKEGY-SVKLIERDPERAEELAEELPNTLVLHGDG---TDQELLEEEGIDEADAFIALT 305 (453)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHCCCCeEEECCC---CCHHHHHhcCCccCCEEEECC
Confidence 45789999999999999999989899 899999999988877654322 2332221 222345444334799999888
Q ss_pred CChH
Q 022865 273 GNVS 276 (291)
Q Consensus 273 g~~~ 276 (291)
++..
T Consensus 306 ~~~~ 309 (453)
T PRK09496 306 NDDE 309 (453)
T ss_pred CCcH
Confidence 8643
No 398
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.66 E-value=0.19 Score=43.58 Aligned_cols=78 Identities=18% Similarity=0.339 Sum_probs=47.7
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHH-Hhc-CCC-EE--eCCCCCCchHHHHHHhhcC
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFDRA-KNF-GVT-EF--VNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~---~~~~~~-~~~-ga~-~~--i~~~~~~~~~~~~v~~~~~ 262 (291)
.+++++|+|+ +++|.+.++.+...|+ +|+.+.++. ++++.+ .++ +.. .. .|..+ ..+..+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence 4688999986 5999998888888899 788875542 333333 333 221 12 23222 2344444444322
Q ss_pred --CCccEEEEcCC
Q 022865 263 --GGVDYSFECIG 273 (291)
Q Consensus 263 --gg~d~v~d~~g 273 (291)
+++|+++++.|
T Consensus 84 ~~g~ld~lv~nag 96 (257)
T PRK08594 84 EVGVIHGVAHCIA 96 (257)
T ss_pred hCCCccEEEECcc
Confidence 47999999887
No 399
>PRK04457 spermidine synthase; Provisional
Probab=94.66 E-value=0.3 Score=42.81 Aligned_cols=93 Identities=12% Similarity=0.095 Sum_probs=61.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc-CCC---EEeCCCCCCchHHHHHHhhcCCCccEE
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVT---EFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~-ga~---~~i~~~~~~~~~~~~v~~~~~gg~d~v 268 (291)
.++++||++|.|. |.++..+++.....+|++++.+++-.+.++++ +.. .-+.... .+..+.+.+. .+.+|+|
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~--~Da~~~l~~~-~~~yD~I 140 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE--ADGAEYIAVH-RHSTDVI 140 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE--CCHHHHHHhC-CCCCCEE
Confidence 3467899999876 77888888887655999999999999998764 321 1111110 2333444432 3479977
Q ss_pred E-EcCC---------ChHHHHHHHHHhhccC
Q 022865 269 F-ECIG---------NVSVMRAALECCHKVS 289 (291)
Q Consensus 269 ~-d~~g---------~~~~~~~~~~~l~~~g 289 (291)
+ |... ....++.+.+.|+++|
T Consensus 141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pgG 171 (262)
T PRK04457 141 LVDGFDGEGIIDALCTQPFFDDCRNALSSDG 171 (262)
T ss_pred EEeCCCCCCCccccCcHHHHHHHHHhcCCCc
Confidence 6 3321 1467888899999983
No 400
>PRK07402 precorrin-6B methylase; Provisional
Probab=94.66 E-value=0.48 Score=39.37 Aligned_cols=97 Identities=22% Similarity=0.277 Sum_probs=56.2
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhcC
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~~ 262 (291)
.....++++++||=+|+|. |..++.+++.....+|+++|.+++..+.+++ ++.+.+..... +..+.+....
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~---d~~~~~~~~~- 107 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG---SAPECLAQLA- 107 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC---chHHHHhhCC-
Confidence 3445667888888887754 5566666766543499999999988777753 45432211111 1112222221
Q ss_pred CCcc-EEEEcCCC-hHHHHHHHHHhhcc
Q 022865 263 GGVD-YSFECIGN-VSVMRAALECCHKV 288 (291)
Q Consensus 263 gg~d-~v~d~~g~-~~~~~~~~~~l~~~ 288 (291)
..+| ++++.... ...++.+.+.|+++
T Consensus 108 ~~~d~v~~~~~~~~~~~l~~~~~~Lkpg 135 (196)
T PRK07402 108 PAPDRVCIEGGRPIKEILQAVWQYLKPG 135 (196)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHhcCCC
Confidence 2234 44443222 46678888889888
No 401
>PRK12937 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.23 Score=42.35 Aligned_cols=80 Identities=18% Similarity=0.153 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HHHhcCCCE-EeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD----RAKNFGVTE-FVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~----~~~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
++++++|+|+ |.+|...+..+...|+ +++.+.++.+ +.+ ...+.+... .+..+- +..++.+.+.+.. .+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678999987 9999999998888999 6666554432 222 222333321 222221 1223333333321 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (245)
T PRK12937 83 RIDVLVNNAGV 93 (245)
T ss_pred CCCEEEECCCC
Confidence 79999999884
No 402
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.64 E-value=0.2 Score=45.30 Aligned_cols=39 Identities=26% Similarity=0.283 Sum_probs=33.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
++|.|+|+|.+|...++.+...|+ .|+..|.+++.++.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence 579999999999888888878899 999999998765543
No 403
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.64 E-value=0.22 Score=42.98 Aligned_cols=75 Identities=21% Similarity=0.134 Sum_probs=46.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-CEEe--CCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TEFV--NPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga-~~~i--~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
..+|||+|+ |.+|...++.+...|+ +|+++.++.++.......+. -.++ |..+ . . +.+.+....++|+||.
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d--~-~-~~l~~~~~~~~d~vi~ 91 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE--G-S-DKLVEAIGDDSDAVIC 91 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC--C-H-HHHHHHhhcCCCEEEE
Confidence 578999997 9999999888878898 88888787776543221111 1222 2222 1 1 2232322226999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.|.
T Consensus 92 ~~g~ 95 (251)
T PLN00141 92 ATGF 95 (251)
T ss_pred CCCC
Confidence 8774
No 404
>PRK12743 oxidoreductase; Provisional
Probab=94.63 E-value=0.22 Score=42.98 Aligned_cols=78 Identities=19% Similarity=0.109 Sum_probs=47.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++||+|+ +.+|...++.+...|+ +|+.+. ++.++.+.+ +..+... .+ |..+ ..++...+.+.. .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 468999988 9999999998888999 777664 444443322 2344322 22 2222 223333333322 23
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 405
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.62 E-value=0.098 Score=47.60 Aligned_cols=77 Identities=19% Similarity=0.111 Sum_probs=46.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcC--CCE-EeCCCCCCchHHHHHHhhcCC-CccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG--VTE-FVNPKDHDKPIQQVLVDLTDG-GVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~g--a~~-~i~~~~~~~~~~~~v~~~~~g-g~d~ 267 (291)
++.+|||+|+ |.+|...++.+...|. +|+++++++...... ..++ ... .+..+-.+. +.+.++... ++|+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~d~ 78 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA---AKLRKAIAEFKPEI 78 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH---HHHHHHHhhcCCCE
Confidence 4678999987 9999999999888998 898887766543211 1221 111 121111111 223333223 6899
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
||.+++.
T Consensus 79 vih~A~~ 85 (349)
T TIGR02622 79 VFHLAAQ 85 (349)
T ss_pred EEECCcc
Confidence 9999873
No 406
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.61 E-value=0.26 Score=42.72 Aligned_cols=79 Identities=19% Similarity=0.276 Sum_probs=48.7
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHH-HHHhcCCC-EEe--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP--KKFD-RAKNFGVT-EFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~--~~~~-~~~~~ga~-~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.+++++|+|+ +++|.+.++.+...|+ +|+.+++++ +.++ +..+++.. ..+ |..+ ..++.+.+.+.. .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 4678999985 7999998888888899 888887553 3323 33344321 122 2222 233444444332 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++++.|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 479999999874
No 407
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=94.60 E-value=0.32 Score=43.41 Aligned_cols=86 Identities=21% Similarity=0.276 Sum_probs=52.8
Q ss_pred CEEEEEcCChHHHH-HHHHHHHcCCCeEEE-EcCChh--hHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 196 SIVAVFGLGTVGLA-VAEGAKAAGASRVIG-IDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 196 ~~vlI~G~g~vG~~-ai~~a~~~g~~~v~~-~~~~~~--~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
-++.|+|.|.+|.. +..+.+.-++ .+++ ++.+++ .+++++++|..... .++.+.+.......+|+||++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~~~~~dIDiVf~A 77 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAMPEFDDIDIVFDA 77 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhCcCCCCCCEEEEC
Confidence 47899999999986 4445443456 5554 545443 34667788864322 122223332111369999999
Q ss_pred CCChHHHHHHHHHhhcc
Q 022865 272 IGNVSVMRAALECCHKV 288 (291)
Q Consensus 272 ~g~~~~~~~~~~~l~~~ 288 (291)
++.....+.+.+++..|
T Consensus 78 T~a~~H~e~a~~a~eaG 94 (302)
T PRK08300 78 TSAGAHVRHAAKLREAG 94 (302)
T ss_pred CCHHHHHHHHHHHHHcC
Confidence 99987777776665543
No 408
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=94.59 E-value=0.057 Score=40.16 Aligned_cols=77 Identities=21% Similarity=0.245 Sum_probs=47.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
.+.+|||+|+|.+|..-++.+...|+ +|++++... +..++ --.... ..+ .+.. .++|+||-+++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~~--~i~~~~-----~~~----~~~l-~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSEG--LIQLIR-----REF----EEDL-DGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHHT--SCEEEE-----SS-----GGGC-TTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhhh--HHHHHh-----hhH----HHHH-hhheEEEecCC
Confidence 46889999999999999999988998 899987765 22221 111111 111 1111 26999999999
Q ss_pred ChHHHHHHHHHhh
Q 022865 274 NVSVMRAALECCH 286 (291)
Q Consensus 274 ~~~~~~~~~~~l~ 286 (291)
++..-....+..+
T Consensus 70 d~~~n~~i~~~a~ 82 (103)
T PF13241_consen 70 DPELNEAIYADAR 82 (103)
T ss_dssp -HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 9775544444444
No 409
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.57 E-value=0.25 Score=41.96 Aligned_cols=79 Identities=24% Similarity=0.312 Sum_probs=46.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH-H---HHhcCCCE-Ee--CCCCCCchHHHHHHhhcC--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD-R---AKNFGVTE-FV--NPKDHDKPIQQVLVDLTD-- 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~-~---~~~~ga~~-~i--~~~~~~~~~~~~v~~~~~-- 262 (291)
+++++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+ . .+..+... .+ |..+ ..++.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 3568999988 9999999998888899 6766555443 222 1 12223222 22 2222 2333333333322
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|.|+.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 368999999874
No 410
>PRK06849 hypothetical protein; Provisional
Probab=94.54 E-value=0.27 Score=45.57 Aligned_cols=79 Identities=20% Similarity=0.205 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC---CCCCCchHHHHHHhhcCC-CccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN---PKDHDKPIQQVLVDLTDG-GVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~---~~~~~~~~~~~v~~~~~g-g~d~v 268 (291)
...+|||+|+ .++++..+..++..|+ +|++++..+........+ +++.+. ...+.+.+.+.+.++... ++|+|
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~~-~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSRA-VDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHh-hhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 3578999998 5689999999999999 899998886554322222 233321 222234566777776544 79999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
+-+...
T Consensus 81 IP~~e~ 86 (389)
T PRK06849 81 IPTCEE 86 (389)
T ss_pred EECChH
Confidence 987664
No 411
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.50 E-value=0.26 Score=43.11 Aligned_cols=78 Identities=18% Similarity=0.144 Sum_probs=49.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
..+++|+|+ |.+|...+..+...|+ +|+++.++.++++.. +..+... .+ |..+ ..++.+.+.+.. -++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence 458999987 9999999988888899 888887776654432 2233322 11 2221 233333333321 237
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|.+.|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999999875
No 412
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=94.50 E-value=0.082 Score=46.94 Aligned_cols=86 Identities=21% Similarity=0.225 Sum_probs=57.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC-
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG- 273 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g- 273 (291)
..|.|+|.|-+|.-++.+|..+|+ +|+..+.+.+|++.+.. |+.+....+.. ..++.+.+. ++|++|..+=
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st-~~~iee~v~-----~aDlvIgaVLI 241 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST-PSNIEEAVK-----KADLVIGAVLI 241 (371)
T ss_pred ccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC-HHHHHHHhh-----hccEEEEEEEe
Confidence 457888999999999999999999 99999999999988875 44442233322 122222222 4787776531
Q ss_pred -----ChHHHHHHHHHhhcc
Q 022865 274 -----NVSVMRAALECCHKV 288 (291)
Q Consensus 274 -----~~~~~~~~~~~l~~~ 288 (291)
.....++.++.|++|
T Consensus 242 pgakaPkLvt~e~vk~MkpG 261 (371)
T COG0686 242 PGAKAPKLVTREMVKQMKPG 261 (371)
T ss_pred cCCCCceehhHHHHHhcCCC
Confidence 123355566667665
No 413
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.50 E-value=0.35 Score=41.13 Aligned_cols=70 Identities=26% Similarity=0.360 Sum_probs=48.4
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 198 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 198 vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~--~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
|+|+|+ |.+|...++.+...+. +|.++.++.. ..+.+++.|+..+ ..+.++ .+.+.+... |+|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~---~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADYDD---PESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-TT----HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-ecccCC---HHHHHHHHc-CCceEEeecC
Confidence 689998 9999999999988888 7888777764 3455667888543 333211 223333332 7999999988
No 414
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.47 E-value=0.23 Score=44.04 Aligned_cols=70 Identities=19% Similarity=0.181 Sum_probs=45.2
Q ss_pred hcccchhhhhhhhhhcCC-CCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCCEEeCCCC
Q 022865 175 LGCGVPTGLGAVWNTAKV-EPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKD 248 (291)
Q Consensus 175 l~~~~~ta~~~~~~~~~~-~~g~~vlI~G~g~-vG~~ai~~a~~~g~~~v~~~~~~~~~~~-~~~~~ga~~~i~~~~ 248 (291)
.+|+....+. +.+..++ -.|++++|+|.|. +|.-++.++...|+ +|+.+.+....++ .++ .+|.++....
T Consensus 138 ~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~~l~~~~~--~ADIVIsAvg 210 (286)
T PRK14175 138 VPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSKDMASYLK--DADVIVSAVG 210 (286)
T ss_pred CCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCchhHHHHHh--hCCEEEECCC
Confidence 3444443333 3344443 4789999999965 99999999999999 8888766544332 222 3666665543
No 415
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=94.47 E-value=0.27 Score=44.12 Aligned_cols=78 Identities=21% Similarity=0.205 Sum_probs=50.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHH-HhcCC---C-EEe--CCCCCCchHHHHHHhhc--CC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRA-KNFGV---T-EFV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~-~~~ga---~-~~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++|.|+ +++|...+..+...| + +|+.+.+++++.+.+ +++.. . ..+ |..+ ..+....+.+.. .+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 568999988 999999888777889 7 888888888766443 33321 1 112 2222 223333443332 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 416
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=94.44 E-value=0.27 Score=41.74 Aligned_cols=77 Identities=18% Similarity=0.194 Sum_probs=45.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH-Hhc---CCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA-KNF---GVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~-~~~---ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
+++||+|+ |.+|...+..+...|+ +++++.+ ++++.+.. .++ +... .+ |..+ ..++.+.+.+.. .+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS-FESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 46899987 9999999988888999 7777766 44433222 222 2211 22 2222 233333333322 236
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|.||.+.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 9999999874
No 417
>PLN02476 O-methyltransferase
Probab=94.44 E-value=0.32 Score=43.01 Aligned_cols=100 Identities=16% Similarity=0.139 Sum_probs=64.7
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhc
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~ 261 (291)
....+..+.++||=+|.+. |..++.+|+.++ -.+|+.++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 111 ~~L~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l~ 187 (278)
T PLN02476 111 AMLVQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSMI 187 (278)
T ss_pred HHHHHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHH
Confidence 3445566788999998743 777778888774 2379999999998887753 56543222221 23334444432
Q ss_pred ----CCCccEEEEcCCC---hHHHHHHHHHhhccC
Q 022865 262 ----DGGVDYSFECIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 262 ----~gg~d~v~d~~g~---~~~~~~~~~~l~~~g 289 (291)
.+.||+||--... ...++.+++.|++||
T Consensus 188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GG 222 (278)
T PLN02476 188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGG 222 (278)
T ss_pred hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCc
Confidence 2479977755443 456888899999984
No 418
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=94.40 E-value=0.27 Score=42.36 Aligned_cols=99 Identities=20% Similarity=0.194 Sum_probs=62.8
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhc-
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT- 261 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~- 261 (291)
...+..+.++||-+|.|. |..++.+++.++ ..+|+.++.+++..+.+++ .|....+.... .+..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~--gda~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ--SDALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHHh
Confidence 345556778999998743 667777777763 4499999999998887754 34332221111 22333444432
Q ss_pred ---CCCccEEEEcCC---ChHHHHHHHHHhhccC
Q 022865 262 ---DGGVDYSFECIG---NVSVMRAALECCHKVS 289 (291)
Q Consensus 262 ---~gg~d~v~d~~g---~~~~~~~~~~~l~~~g 289 (291)
.+.||+||--.. -...+..+++++++||
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG 172 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGG 172 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCe
Confidence 237998885432 2456788889999883
No 419
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.38 E-value=0.26 Score=42.36 Aligned_cols=78 Identities=21% Similarity=0.237 Sum_probs=47.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HHHhcCCC-EEeCCCC-CCchHHHHHHhhcC--CCc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD----RAKNFGVT-EFVNPKD-HDKPIQQVLVDLTD--GGV 265 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~----~~~~~ga~-~~i~~~~-~~~~~~~~v~~~~~--gg~ 265 (291)
+++||.|+ |.+|...+..+...|+ +|+.+++... +.+ ..++.+.. ..+..+- +..++.+.+.+... +.+
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 57899988 9999999988888899 8888876532 221 12223332 2222221 12333344443321 379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (256)
T PRK12745 82 DCLVNNAGV 90 (256)
T ss_pred CEEEECCcc
Confidence 999999874
No 420
>PRK08223 hypothetical protein; Validated
Probab=94.38 E-value=0.22 Score=44.14 Aligned_cols=35 Identities=31% Similarity=0.277 Sum_probs=30.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|..+++.+.++|..++..+|.+.
T Consensus 27 ~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 27 NSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 46899999999999999999999999998887653
No 421
>PRK01581 speE spermidine synthase; Validated
Probab=94.34 E-value=0.57 Score=42.95 Aligned_cols=95 Identities=17% Similarity=0.095 Sum_probs=59.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC-CCEEe--CCCCC-----CchHHHHHHhhcCCC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG-VTEFV--NPKDH-----DKPIQQVLVDLTDGG 264 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g-a~~~i--~~~~~-----~~~~~~~v~~~~~gg 264 (291)
...++|||+|+|. |..+..+++..+..+|++++.+++-.++++++. ....- ...+. -.+..+.+.. ..+.
T Consensus 149 ~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~~ 226 (374)
T PRK01581 149 IDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSSL 226 (374)
T ss_pred CCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCCC
Confidence 3457999999764 667778887766679999999999999998631 00000 00000 0123344443 3347
Q ss_pred ccEEEEcCCC-----------hHHHHHHHHHhhccC
Q 022865 265 VDYSFECIGN-----------VSVMRAALECCHKVS 289 (291)
Q Consensus 265 ~d~v~d~~g~-----------~~~~~~~~~~l~~~g 289 (291)
||+||--... ...+..+.+.|+++|
T Consensus 227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgG 262 (374)
T PRK01581 227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTEDG 262 (374)
T ss_pred ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCc
Confidence 9977654332 235778888899984
No 422
>PRK08219 short chain dehydrogenase; Provisional
Probab=94.32 E-value=0.46 Score=39.84 Aligned_cols=75 Identities=13% Similarity=0.123 Sum_probs=45.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCCCCC-CchHHHHHHhhcCCCccEEEEcC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDH-DKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~-~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
.++||+|+ |.+|...+..+... + +|++++++.++.+.+.+ +..-+++..+-. ..++.+.+... +++|.||.+.
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~a 79 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNA 79 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECC
Confidence 57999987 99998887766655 6 89999998877654442 211122222211 12222222221 2699999998
Q ss_pred CC
Q 022865 273 GN 274 (291)
Q Consensus 273 g~ 274 (291)
|.
T Consensus 80 g~ 81 (227)
T PRK08219 80 GV 81 (227)
T ss_pred Cc
Confidence 74
No 423
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=94.31 E-value=1 Score=40.14 Aligned_cols=61 Identities=20% Similarity=0.310 Sum_probs=44.9
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhcCCCEEeCCC
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~--~~~~~~~~~~~~ga~~~i~~~ 247 (291)
.....++||.+|+=--+|..|...+.+|+++|++-+++++ .+.+|+++++.+|+..+....
T Consensus 54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 3556689999554444599999999999999995555543 456889999999996554433
No 424
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.30 E-value=0.26 Score=38.40 Aligned_cols=35 Identities=29% Similarity=0.416 Sum_probs=29.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|...+..+...|..+++.+|...
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDI 36 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcc
Confidence 46899999999999999999899998998887643
No 425
>PLN02823 spermine synthase
Probab=94.28 E-value=0.33 Score=44.20 Aligned_cols=94 Identities=16% Similarity=0.091 Sum_probs=57.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-CE-EeCCCC---CCchHHHHHHhhcCCCccEE
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TE-FVNPKD---HDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga-~~-~i~~~~---~~~~~~~~v~~~~~gg~d~v 268 (291)
..++|||+|+|. |..+..+++..+..+|++++.+++-.++++++-. .. ...... ...+..+.+.+ ..+.+|+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 457899998865 6666778887777799999999999999987532 10 010000 00233344533 33489966
Q ss_pred EEcCC------------ChHHHH-HHHHHhhccC
Q 022865 269 FECIG------------NVSVMR-AALECCHKVS 289 (291)
Q Consensus 269 ~d~~g------------~~~~~~-~~~~~l~~~g 289 (291)
|-=+. +.+.++ .+.+.|+++|
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~G 214 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGG 214 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCCc
Confidence 64321 123355 6778888884
No 426
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.27 E-value=0.21 Score=42.82 Aligned_cols=74 Identities=30% Similarity=0.312 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EEe--CCCCCCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFV--NPKDHDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~i--~~~~~~~~~~~~v~~~~--~gg~d~ 267 (291)
+++++||+|+ |.+|...+..+...|+ +|+.++++. ....+.. ..+ |..+ ...+.+.+.+.. .+.+|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4678999988 9999999988888898 888887765 1122221 122 2222 233444443322 236999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9999885
No 427
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.24 E-value=0.35 Score=43.24 Aligned_cols=79 Identities=22% Similarity=0.286 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHH-HH---HhcCCCEE-e--CCCCCCchHHHHHHhhc-CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFD-RA---KNFGVTEF-V--NPKDHDKPIQQVLVDLT-DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~-~~~~-~~---~~~ga~~~-i--~~~~~~~~~~~~v~~~~-~g 263 (291)
+++++||+|+ +++|...++.+...|+ +|+.+++.+ ++.+ .+ ++.|.... + |..+ .+...+.+.... .+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d-~~~~~~~~~~~~~~g 88 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ-RATADELVATAVGLG 88 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHhC
Confidence 4678999987 9999998888888899 788877643 2322 22 23343222 2 2211 122222222211 35
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 89 ~iD~li~nAG~ 99 (306)
T PRK07792 89 GLDIVVNNAGI 99 (306)
T ss_pred CCCEEEECCCC
Confidence 79999999884
No 428
>PRK07985 oxidoreductase; Provisional
Probab=94.23 E-value=0.26 Score=43.79 Aligned_cols=79 Identities=19% Similarity=0.187 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~--~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~-- 261 (291)
+++++||+|+ +++|...++.+...|+ +|+.+.++. ++.+.+ ++.+... .+ |..+ .+++.+.+.+..
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 5678999988 9999999988888899 788775432 222222 2333322 22 2222 233444444432
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|+++++.|.
T Consensus 126 ~g~id~lv~~Ag~ 138 (294)
T PRK07985 126 LGGLDIMALVAGK 138 (294)
T ss_pred hCCCCEEEECCCC
Confidence 2479999998874
No 429
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=94.21 E-value=0.16 Score=44.29 Aligned_cols=73 Identities=12% Similarity=0.056 Sum_probs=50.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcC-CCccEEEEcCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD-GGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~-gg~d~v~d~~g~ 274 (291)
+|||+|+.+-|...+..+...|. +|+++.+++...+.+.+.|...++.-..+..+ +.++.. .++|+|+|++-.
T Consensus 2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~----l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGALDPQE----LREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEECCCCHHH----HHHHHHhcCCCEEEEcCCH
Confidence 68999884459888877777898 88888888887777777665555433222222 333333 379999999764
No 430
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=94.20 E-value=0.4 Score=42.57 Aligned_cols=84 Identities=18% Similarity=0.205 Sum_probs=53.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC---CchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH---DKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~---~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+|+|+|+|.+|...+..+...|. .|+.+++++++.+..++.|... . +.. .........+. ..+|+||-++.
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~~~--~~~d~vila~k 75 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPAEL--GPQDLVILAVK 75 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChhHc--CCCCEEEEecc
Confidence 58999999999988887777887 8999988777777666655421 0 000 00000001111 36899999988
Q ss_pred ChHHHHHHHHHhhc
Q 022865 274 NVSVMRAALECCHK 287 (291)
Q Consensus 274 ~~~~~~~~~~~l~~ 287 (291)
... ...+++.+++
T Consensus 76 ~~~-~~~~~~~l~~ 88 (304)
T PRK06522 76 AYQ-LPAALPSLAP 88 (304)
T ss_pred ccc-HHHHHHHHhh
Confidence 754 4555555543
No 431
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.17 E-value=0.33 Score=41.21 Aligned_cols=78 Identities=21% Similarity=0.249 Sum_probs=45.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhcCCC-EEeCCCC-CCchHHHHHHhhc--CCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVT-EFVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~----~~~ga~-~~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
.+++||+|+ |.+|...+..+...|+ +|+.+.+ +++..+.. .+.+.. ..+..+- +...+.+.+.+.. .++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 468999988 9999999998888999 6655444 44333222 222322 1221111 1233333333322 137
Q ss_pred ccEEEEcCC
Q 022865 265 VDYSFECIG 273 (291)
Q Consensus 265 ~d~v~d~~g 273 (291)
+|+||.+.|
T Consensus 85 id~vi~~ag 93 (249)
T PRK12825 85 IDILVNNAG 93 (249)
T ss_pred CCEEEECCc
Confidence 999999987
No 432
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=94.16 E-value=0.33 Score=42.63 Aligned_cols=81 Identities=21% Similarity=0.265 Sum_probs=46.6
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHH-HHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~-~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+|.|+|.|.+|...++..... +. .+.++-..+.+.+. ...++.. +..+. + +.++ ...+|+|++|++.
T Consensus 3 rVgIiG~G~iG~~~~~~l~~~~~~-~l~~v~~~~~~~~~~~~~~~~~-~~~~~----d----~~~l-~~~~DvVve~t~~ 71 (265)
T PRK13303 3 KVAMIGFGAIGAAVLELLEHDPDL-RVDWVIVPEHSIDAVRRALGEA-VRVVS----S----VDAL-PQRPDLVVECAGH 71 (265)
T ss_pred EEEEECCCHHHHHHHHHHhhCCCc-eEEEEEEcCCCHHHHhhhhccC-CeeeC----C----HHHh-ccCCCEEEECCCH
Confidence 688999999999877766655 44 44443222222222 2223211 11111 1 1222 2368999999998
Q ss_pred hHHHHHHHHHhhcc
Q 022865 275 VSVMRAALECCHKV 288 (291)
Q Consensus 275 ~~~~~~~~~~l~~~ 288 (291)
....+.+.++|+.|
T Consensus 72 ~~~~e~~~~aL~aG 85 (265)
T PRK13303 72 AALKEHVVPILKAG 85 (265)
T ss_pred HHHHHHHHHHHHcC
Confidence 87777888877654
No 433
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=94.15 E-value=0.54 Score=43.39 Aligned_cols=92 Identities=15% Similarity=0.239 Sum_probs=60.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEc--CChhh-HHHHHhcCCCEEeCCCCCC-chH--------------H
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAA--GASRVIGID--IDPKK-FDRAKNFGVTEFVNPKDHD-KPI--------------Q 254 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~--g~~~v~~~~--~~~~~-~~~~~~~ga~~~i~~~~~~-~~~--------------~ 254 (291)
++|.|+|+ |.+|..++.+.+.. .+ +|+++. ++.++ .+.+++|+...+...+... ..+ .
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 57899997 99999999988766 46 777764 44444 3555788887765544210 011 1
Q ss_pred HHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 255 QVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 255 ~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+.++... .+|+|++++++...+...+.+++.|
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG 115 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG 115 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC
Confidence 123333333 6899999988876678888887654
No 434
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.15 E-value=0.34 Score=41.90 Aligned_cols=79 Identities=18% Similarity=0.161 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~-~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+.++ +++.+.+ ++.+... .+ |..+ ..+..+.+.... .
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 5689999987 9999999998889998 67666553 3332222 2233321 22 3322 233333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++++.|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 479999999884
No 435
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=94.13 E-value=0.28 Score=42.00 Aligned_cols=77 Identities=19% Similarity=0.153 Sum_probs=46.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
+++||.|+ |.+|...++.+...|+ +|+.+ .+++++++.. ++.+... .+ |.. +..++.+.+.+.. .++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGGRACVVAGDVA-NEADVIAMFDAVQSAFGR 80 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccC-CHHHHHHHHHHHHHhcCC
Confidence 47899987 9999998888888898 66654 4555544322 2233222 22 222 1233444444332 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|.++|.
T Consensus 81 id~li~~ag~ 90 (248)
T PRK06947 81 LDALVNNAGI 90 (248)
T ss_pred CCEEEECCcc
Confidence 9999999873
No 436
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.11 E-value=0.31 Score=43.07 Aligned_cols=43 Identities=23% Similarity=0.439 Sum_probs=36.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|.|+|.|.+|...+..++..|. +|+++++++++++.+.+.|.
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~ 44 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGL 44 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCC
Confidence 58899999999888888778888 89999999998888877664
No 437
>PRK06153 hypothetical protein; Provisional
Probab=94.09 E-value=0.58 Score=43.19 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=31.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
.+.+|+|+|+|++|..++..+-++|..+++.+|.+
T Consensus 175 ~~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D 209 (393)
T PRK06153 175 EGQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGD 209 (393)
T ss_pred hhCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999999899988765
No 438
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=94.07 E-value=0.34 Score=41.22 Aligned_cols=78 Identities=22% Similarity=0.266 Sum_probs=46.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcC---CCE-EeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFG---VTE-FVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~--~~~~~~~~g---a~~-~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
+++||+|+ |.+|...++.+...|+ +|+.++++++ ..++...+. ... .+..+- +..++.+.+.... .+.+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899987 9999998888878898 8888877743 222222222 111 222221 1223333333322 2369
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (245)
T PRK12824 82 DILVNNAGI 90 (245)
T ss_pred CEEEECCCC
Confidence 999999874
No 439
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=94.06 E-value=0.4 Score=42.55 Aligned_cols=43 Identities=26% Similarity=0.336 Sum_probs=36.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 43 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA 43 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 37788999999988777778898 89999999998888776664
No 440
>PRK09134 short chain dehydrogenase; Provisional
Probab=94.03 E-value=0.36 Score=41.68 Aligned_cols=79 Identities=14% Similarity=0.122 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH-Hh---cCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA-KN---FGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~-~~---~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ |.+|...++.+...|+ +|+.+.+ ++++.+.+ .+ .+... .+ |..+ ..++.+.+.+.. .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD-EAEVRALVARASAAL 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4568999988 9999998888888898 6766544 34443322 22 23321 12 2222 233333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|.+.|.
T Consensus 86 ~~iD~vi~~ag~ 97 (258)
T PRK09134 86 GPITLLVNNASL 97 (258)
T ss_pred CCCCEEEECCcC
Confidence 479999999874
No 441
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=94.03 E-value=0.51 Score=44.51 Aligned_cols=75 Identities=21% Similarity=0.319 Sum_probs=53.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
+|+|+|.|.+|...++.+...|. .|++++.++++.+.+++ ++...+. -+. .-...+.+..-.++|.|+-++++.
T Consensus 2 ~viIiG~G~ig~~~a~~L~~~g~-~v~vid~~~~~~~~~~~~~~~~~~~-gd~---~~~~~l~~~~~~~a~~vi~~~~~~ 76 (453)
T PRK09496 2 KIIIVGAGQVGYTLAENLSGENN-DVTVIDTDEERLRRLQDRLDVRTVV-GNG---SSPDVLREAGAEDADLLIAVTDSD 76 (453)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhhcCEEEEE-eCC---CCHHHHHHcCCCcCCEEEEecCCh
Confidence 58899999999999999999998 89999999998887765 5543322 211 112234443223799999998875
Q ss_pred H
Q 022865 276 S 276 (291)
Q Consensus 276 ~ 276 (291)
.
T Consensus 77 ~ 77 (453)
T PRK09496 77 E 77 (453)
T ss_pred H
Confidence 4
No 442
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=94.00 E-value=0.68 Score=38.75 Aligned_cols=34 Identities=24% Similarity=0.396 Sum_probs=30.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
..+|+|+|+|++|...+..+-..|.++++.+|.+
T Consensus 19 ~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 19 SAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred hCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 3689999999999999999999999999888755
No 443
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=93.94 E-value=0.27 Score=43.70 Aligned_cols=39 Identities=23% Similarity=0.405 Sum_probs=34.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
++|.|+|+|.+|...++.+...|. +|+.++.++++++.+
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~ 42 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGY-DVTIVDVSEEILKNA 42 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHH
Confidence 579999999999998888888898 899999999887654
No 444
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.92 E-value=0.15 Score=45.33 Aligned_cols=39 Identities=26% Similarity=0.352 Sum_probs=33.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
.+|.|+|+|.+|...++.+...|+ .|+..+.+++.++.+
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~~ 44 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATAG 44 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHH
Confidence 479999999999888877778899 999999999987763
No 445
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=93.91 E-value=0.33 Score=44.85 Aligned_cols=81 Identities=26% Similarity=0.281 Sum_probs=47.2
Q ss_pred CCCCEEEEEcC-ChHHHH--HHHHHHHcCCCeEEEEcCChh--h--------------HHHHHhcCCCE-EeCCCCC-Cc
Q 022865 193 EPGSIVAVFGL-GTVGLA--VAEGAKAAGASRVIGIDIDPK--K--------------FDRAKNFGVTE-FVNPKDH-DK 251 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~--ai~~a~~~g~~~v~~~~~~~~--~--------------~~~~~~~ga~~-~i~~~~~-~~ 251 (291)
..++++||+|+ +++|++ .++.+ ..|+ +++++....+ + .+++++.|... .+..+-. ++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 44678999987 899998 45555 7898 7777753221 1 23445566532 2322221 22
Q ss_pred hHHHHHHhhc--CCCccEEEEcCCCh
Q 022865 252 PIQQVLVDLT--DGGVDYSFECIGNV 275 (291)
Q Consensus 252 ~~~~~v~~~~--~gg~d~v~d~~g~~ 275 (291)
...+.+.... .|++|+++++++.+
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 3333333322 24799999998864
No 446
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=93.89 E-value=0.41 Score=40.86 Aligned_cols=80 Identities=18% Similarity=0.175 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhcC--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLTD--G 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~~--g 263 (291)
++++++|+|+ |.+|...+..+...|+ +|+++.+ ++++.+.. ++.+.+. .+..+- +...+.+.+.+... +
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3679999987 9999998888878898 6766533 33433222 2233322 222221 12333444443322 3
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|+||.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (247)
T PRK12935 84 KVDILVNNAGI 94 (247)
T ss_pred CCCEEEECCCC
Confidence 68999999885
No 447
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=93.87 E-value=0.22 Score=41.57 Aligned_cols=92 Identities=14% Similarity=0.159 Sum_probs=54.4
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCCEEeCCCCCCchHHHHHHhhcC
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~~~i~~~~~~~~~~~~v~~~~~ 262 (291)
.......++.+||-+|+|. |..+..+++ .|. +|+++|.+++-++.+++. +.. +.... .++.. . .. .
T Consensus 23 ~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~--~d~~~-~-~~-~ 92 (195)
T TIGR00477 23 REAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA--YDINA-A-AL-N 92 (195)
T ss_pred HHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe--ccchh-c-cc-c
Confidence 3344444567888888855 667777776 477 899999999877665432 222 11100 01100 0 11 2
Q ss_pred CCccEEEEcC-----CC---hHHHHHHHHHhhcc
Q 022865 263 GGVDYSFECI-----GN---VSVMRAALECCHKV 288 (291)
Q Consensus 263 gg~d~v~d~~-----g~---~~~~~~~~~~l~~~ 288 (291)
+.+|+|+.+. .. +..+..+.+.|+++
T Consensus 93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 126 (195)
T TIGR00477 93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG 126 (195)
T ss_pred CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC
Confidence 3699887642 11 35677788888988
No 448
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=93.87 E-value=0.41 Score=42.85 Aligned_cols=37 Identities=22% Similarity=0.173 Sum_probs=30.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~ 231 (291)
.+++|||+|+ |.+|...+..+...|+ +|+++.++.++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 41 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTD 41 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence 4679999987 9999998888888898 78877666554
No 449
>PRK13984 putative oxidoreductase; Provisional
Probab=93.86 E-value=0.36 Score=47.58 Aligned_cols=77 Identities=25% Similarity=0.249 Sum_probs=52.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHHHhcCCCEEeCCCCC-
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP---------------------KKFDRAKNFGVTEFVNPKDH- 249 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~---------------------~~~~~~~~~ga~~~i~~~~~- 249 (291)
.+++++|+|+|+|+.|+.++..++.+|. +|++++..+ ...+.++++|.+..++..-.
T Consensus 280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 358 (604)
T PRK13984 280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK 358 (604)
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence 4568899999999999999999999999 788876543 12455677787544432211
Q ss_pred CchHHHHHHhhcCCCccEEEEcCCC
Q 022865 250 DKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 250 ~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+... +.+. ..+|.||-++|.
T Consensus 359 ~~~~-~~~~----~~yD~vilAtGa 378 (604)
T PRK13984 359 DIPL-EELR----EKHDAVFLSTGF 378 (604)
T ss_pred cCCH-HHHH----hcCCEEEEEcCc
Confidence 1111 1121 269999999995
No 450
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.82 E-value=0.4 Score=41.02 Aligned_cols=78 Identities=17% Similarity=0.138 Sum_probs=46.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHH-HhcCCCE-Ee--CCCCCCchHHHHHHh---hcCCCc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVD---LTDGGV 265 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~~~~-~~~ga~~-~i--~~~~~~~~~~~~v~~---~~~gg~ 265 (291)
++++||+|+ |.+|...+..+...|+ +|+.+. +.+++.+.+ .+++... .+ |..+ ..++.+.+.+ ..+.++
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTD-REQVQAMFATATEHFGKPI 82 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHhCCCC
Confidence 468999987 9999999988888898 676653 344444333 3343221 22 2222 2333333333 222249
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|.+.|.
T Consensus 83 d~li~~ag~ 91 (253)
T PRK08642 83 TTVVNNALA 91 (253)
T ss_pred eEEEECCCc
Confidence 999998763
No 451
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=93.82 E-value=0.34 Score=39.05 Aligned_cols=74 Identities=24% Similarity=0.314 Sum_probs=49.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC----CchHHHHHHhhcCC-CccEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDG-GVDYS 268 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~----~~~~~~~v~~~~~g-g~d~v 268 (291)
..+|+|.|+ |.+|.++++.-|+.++ -|..+|-++... .-+..+++...+ ++...+.+.+...+ ++|.|
T Consensus 3 agrVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav 76 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV 76 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence 357888888 9999999999999999 888887776532 112223332221 12334445555555 99999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|...|+
T Consensus 77 ~CVAGG 82 (236)
T KOG4022|consen 77 FCVAGG 82 (236)
T ss_pred EEeecc
Confidence 997764
No 452
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.79 E-value=0.33 Score=43.05 Aligned_cols=40 Identities=23% Similarity=0.368 Sum_probs=34.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
++|.|+|+|.+|...++.+...|. +|++.+.++++++.+.
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~-~V~~~d~~~~~~~~~~ 41 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGF-QTTLVDIKQEQLESAQ 41 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHH
Confidence 468999999999998888888898 8999999998877654
No 453
>PRK07201 short chain dehydrogenase; Provisional
Probab=93.77 E-value=0.3 Score=48.41 Aligned_cols=78 Identities=26% Similarity=0.356 Sum_probs=51.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
+++++|+|+ |++|...+..+...|+ +|+++++++++++.+. +.+... .+ |..+ ..++.+.+.+.. .++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~ 448 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD-SAAVDHTVKDILAEHGH 448 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 578999987 9999998888888898 8999999887754432 223222 12 2222 233334444322 237
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 449 id~li~~Ag~ 458 (657)
T PRK07201 449 VDYLVNNAGR 458 (657)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 454
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.75 E-value=0.44 Score=40.73 Aligned_cols=78 Identities=18% Similarity=0.133 Sum_probs=45.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhH----HHHHhcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKF----DRAKNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~----~~~~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++||+|+ |.+|...+..+...|+ +++.+.+ +.++. +..++.+... .+ |..+ ..++...+.+.. .+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHcC
Confidence 578999987 9999998887778999 6655443 33322 2223333322 22 2222 223333333322 13
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|.||.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (252)
T PRK06077 84 VADILVNNAGL 94 (252)
T ss_pred CCCEEEECCCC
Confidence 79999999983
No 455
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=93.74 E-value=0.41 Score=40.76 Aligned_cols=77 Identities=16% Similarity=0.133 Sum_probs=47.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~-~~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
+++||+|+ |.+|...+..+...|+ +|++ ..+++++.+.. ++.+... .+ |..+ ..++.+.+.+.. .++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY-TVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD-ENQVVAMFTAIDQHDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCC-HHHHHHHHHHHHHhCCC
Confidence 47899988 9999999888888898 6765 45555543322 2233221 22 2222 233444444432 348
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|.+.|.
T Consensus 80 id~vi~~ag~ 89 (247)
T PRK09730 80 LAALVNNAGI 89 (247)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 456
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=93.73 E-value=0.4 Score=43.00 Aligned_cols=39 Identities=23% Similarity=0.256 Sum_probs=31.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF 232 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~ 232 (291)
..++++||+|+ |.+|...+..+...|+ +|+++.++.++.
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~-~V~~~~r~~~~~ 42 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKDR 42 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCCcch
Confidence 34689999987 9999999988888899 787776665543
No 457
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=93.64 E-value=0.48 Score=40.36 Aligned_cols=96 Identities=16% Similarity=0.126 Sum_probs=56.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEEe-------CCCCCCch-HHHHHHhh-
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV-------NPKDHDKP-IQQVLVDL- 260 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~i-------~~~~~~~~-~~~~v~~~- 260 (291)
...++.+||+.|+|. |.-++.+|. .|+ .|+++|.++..++.+ ++.+..... .+...... +...+.++
T Consensus 34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~ 110 (218)
T PRK13255 34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT 110 (218)
T ss_pred CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence 445678999998866 777777774 799 899999999877765 233321100 00000000 00001111
Q ss_pred --cCCCccEEEEcCC--------ChHHHHHHHHHhhccC
Q 022865 261 --TDGGVDYSFECIG--------NVSVMRAALECCHKVS 289 (291)
Q Consensus 261 --~~gg~d~v~d~~g--------~~~~~~~~~~~l~~~g 289 (291)
..+.||.|+|.+- .+..++...++|+++|
T Consensus 111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG 149 (218)
T PRK13255 111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGC 149 (218)
T ss_pred cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCC
Confidence 1136899999653 2344788888899983
No 458
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=93.59 E-value=0.53 Score=41.43 Aligned_cols=94 Identities=17% Similarity=0.099 Sum_probs=55.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC--EEeCCCC---CCchHHHHHHhhcCCCccEE
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKD---HDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~--~~i~~~~---~~~~~~~~v~~~~~gg~d~v 268 (291)
.+++||++|+|. |..+..+++.....++++++.+++-.+.++++-.. ..++... ...+..+.+.+. .+.+|+|
T Consensus 72 ~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~-~~~yDvI 149 (270)
T TIGR00417 72 NPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADT-ENTFDVI 149 (270)
T ss_pred CCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhC-CCCccEE
Confidence 446999998866 55566677766566899999999887877764110 0000000 001223334332 3479977
Q ss_pred EEcCC----------ChHHHHHHHHHhhccC
Q 022865 269 FECIG----------NVSVMRAALECCHKVS 289 (291)
Q Consensus 269 ~d~~g----------~~~~~~~~~~~l~~~g 289 (291)
+--.. ....++.+.+.|+++|
T Consensus 150 i~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG 180 (270)
T TIGR00417 150 IVDSTDPVGPAETLFTKEFYELLKKALNEDG 180 (270)
T ss_pred EEeCCCCCCcccchhHHHHHHHHHHHhCCCc
Confidence 65322 2344678888899883
No 459
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.59 E-value=0.38 Score=42.69 Aligned_cols=54 Identities=17% Similarity=0.070 Sum_probs=39.6
Q ss_pred CCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 193 EPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 193 ~~g~~vlI~G~g~-vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
-.|++++|+|.|. +|...++++...|+ +|+...+..+.++..- -.+|.+++...
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~~L~~~~-~~aDIvI~AtG 211 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQNLPELV-KQADIIVGAVG 211 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-ccCCEEEEccC
Confidence 4788999999976 99999999999999 8888866443332211 24677776653
No 460
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.59 E-value=0.44 Score=45.00 Aligned_cols=71 Identities=30% Similarity=0.366 Sum_probs=48.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hhH----HHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEE
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKF----DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~-~~~----~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v 268 (291)
.+++++|+|+|.+|+.++..+...|+ .|++++..+ +.. +.+.+.|.. ++..+. .+ +. -+++|+|
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~--~~------~~-~~~~d~v 72 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIE-LVLGEY--PE------EF-LEGVDLV 72 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCc--ch------hH-hhcCCEE
Confidence 46889999999999999999999999 899998875 222 233445543 222221 11 11 1368999
Q ss_pred EEcCCCh
Q 022865 269 FECIGNV 275 (291)
Q Consensus 269 ~d~~g~~ 275 (291)
+.++|..
T Consensus 73 v~~~g~~ 79 (450)
T PRK14106 73 VVSPGVP 79 (450)
T ss_pred EECCCCC
Confidence 9998853
No 461
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.52 E-value=0.46 Score=44.80 Aligned_cols=71 Identities=24% Similarity=0.226 Sum_probs=46.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh----HHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEE
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK----FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~----~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~ 269 (291)
.+++++|+|.|.+|.+++.+++..|+ +|++.+..+.. .+.+++.|......... .+. + ..++|+|+
T Consensus 4 ~~k~v~v~G~g~~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~---~----~~~~d~vV 73 (447)
T PRK02472 4 QNKKVLVLGLAKSGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIKVICGSHP--LEL---L----DEDFDLMV 73 (447)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCEEEeCCCC--HHH---h----cCcCCEEE
Confidence 36789999998899999999999999 89998865422 23344556533221111 111 1 11489999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
.+.|-
T Consensus 74 ~s~gi 78 (447)
T PRK02472 74 KNPGI 78 (447)
T ss_pred ECCCC
Confidence 88764
No 462
>PRK12746 short chain dehydrogenase; Provisional
Probab=93.50 E-value=0.48 Score=40.66 Aligned_cols=78 Identities=18% Similarity=0.260 Sum_probs=46.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH-Hhc---CCCE-Ee--CCCCCCchHHHHHHhhc----
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDRA-KNF---GVTE-FV--NPKDHDKPIQQVLVDLT---- 261 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~-~~~~~~~~~~~-~~~---ga~~-~i--~~~~~~~~~~~~v~~~~---- 261 (291)
+.+++|+|+ |.+|...+..+...|+ +|+. ..++.++.+.. .++ +... .+ |..+ ..++.+.+.+..
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS-IDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC-HHHHHHHHHHHHHHhc
Confidence 578999987 9999999888878898 6655 45666554322 222 2221 22 2222 233333333321
Q ss_pred ---C-CCccEEEEcCCC
Q 022865 262 ---D-GGVDYSFECIGN 274 (291)
Q Consensus 262 ---~-gg~d~v~d~~g~ 274 (291)
. +++|++|.+.|.
T Consensus 84 ~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 84 IRVGTSEIDILVNNAGI 100 (254)
T ss_pred cccCCCCccEEEECCCC
Confidence 1 369999999874
No 463
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=93.50 E-value=0.42 Score=47.56 Aligned_cols=77 Identities=22% Similarity=0.248 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHhcCCCEEeCCCCC-C
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-D 250 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~---------------------~~~~~~~~ga~~~i~~~~~-~ 250 (291)
..+++|+|+|+|+.|+.++..+..+|+ +|++++..+. ..+.++++|.+...+.... +
T Consensus 191 ~~~k~VaIIGaGpAGl~aA~~La~~G~-~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~d 269 (652)
T PRK12814 191 KSGKKVAIIGAGPAGLTAAYYLLRKGH-DVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGRD 269 (652)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcccCc
Confidence 456899999999999999999999999 7888876543 1344566776544433210 0
Q ss_pred chHHHHHHhhcCCCccEEEEcCCCh
Q 022865 251 KPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 251 ~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
... +.+. ..+|.||-++|..
T Consensus 270 v~~-~~~~----~~~DaVilAtGa~ 289 (652)
T PRK12814 270 ITL-EELQ----KEFDAVLLAVGAQ 289 (652)
T ss_pred cCH-HHHH----hhcCEEEEEcCCC
Confidence 111 1111 1489999988864
No 464
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=93.48 E-value=0.69 Score=41.01 Aligned_cols=44 Identities=30% Similarity=0.385 Sum_probs=38.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhcCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVT 241 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~-~~~~~~~ga~ 241 (291)
+|.++|.|..|.-.++=+...|+ .+++.+++++| .+++++.|+.
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~ 46 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGAT 46 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCc
Confidence 57888999999988888888999 99999999999 8888887774
No 465
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=93.46 E-value=0.86 Score=39.55 Aligned_cols=91 Identities=16% Similarity=0.141 Sum_probs=61.6
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhc-CC
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT-DG 263 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~-~g 263 (291)
+.......++++||=+|+|. |..+..+++.. +. +|+++|.+++-++.+++.+.+ ++.. +. .++. .+
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~-~~~~-----d~----~~~~~~~ 88 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVD-ARTG-----DV----RDWKPKP 88 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCc-EEEc-----Ch----hhCCCCC
Confidence 34555667888998898866 77777888776 45 899999999988888775543 2221 11 1111 23
Q ss_pred CccEEEEcCC-----C-hHHHHHHHHHhhcc
Q 022865 264 GVDYSFECIG-----N-VSVMRAALECCHKV 288 (291)
Q Consensus 264 g~d~v~d~~g-----~-~~~~~~~~~~l~~~ 288 (291)
.||+|+-... . ...++.+.+.|+++
T Consensus 89 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg 119 (255)
T PRK14103 89 DTDVVVSNAALQWVPEHADLLVRWVDELAPG 119 (255)
T ss_pred CceEEEEehhhhhCCCHHHHHHHHHHhCCCC
Confidence 7998887432 2 45577788888888
No 466
>PRK12747 short chain dehydrogenase; Provisional
Probab=93.44 E-value=0.68 Score=39.71 Aligned_cols=38 Identities=24% Similarity=0.198 Sum_probs=29.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKF 232 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~ 232 (291)
.++++||+|+ +.+|...++.+...|+ +|+.+. +.+++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~ 42 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA 42 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence 4678999987 9999999998888998 777653 444443
No 467
>PRK07041 short chain dehydrogenase; Provisional
Probab=93.42 E-value=0.49 Score=39.95 Aligned_cols=73 Identities=21% Similarity=0.261 Sum_probs=45.9
Q ss_pred EEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc--CCC-EEeCCCC-CCchHHHHHHhhcCCCccEEEEcC
Q 022865 199 AVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--GVT-EFVNPKD-HDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 199 lI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~--ga~-~~i~~~~-~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
||+|+ |.+|...++.+...|+ +|+++++++++.+... ++ +.. +.+..+- +..++.+.+.+. +++|.+|++.
T Consensus 1 lItGas~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~a 77 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA-RVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITA 77 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECC
Confidence 57787 9999998888888899 8999988877655432 22 221 2222221 123333333332 4689999998
Q ss_pred CC
Q 022865 273 GN 274 (291)
Q Consensus 273 g~ 274 (291)
|.
T Consensus 78 g~ 79 (230)
T PRK07041 78 AD 79 (230)
T ss_pred CC
Confidence 74
No 468
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=93.41 E-value=0.45 Score=39.08 Aligned_cols=78 Identities=18% Similarity=0.203 Sum_probs=46.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-------hhHHHHHhcCCCEEeC-CC-CCCchHHHHHHhhcC--CC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-------KKFDRAKNFGVTEFVN-PK-DHDKPIQQVLVDLTD--GG 264 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~-------~~~~~~~~~ga~~~i~-~~-~~~~~~~~~v~~~~~--gg 264 (291)
++||+|+ |++|+..++.+...+..+++.+.++. +..+.+++.|+...+. .+ .+.+++.+.+.++.. +.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 6789976 99999999888888887999998882 2334445566643221 11 122344555555432 37
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
++.||.+.|.
T Consensus 82 i~gVih~ag~ 91 (181)
T PF08659_consen 82 IDGVIHAAGV 91 (181)
T ss_dssp EEEEEE----
T ss_pred cceeeeeeee
Confidence 8999999875
No 469
>PRK07574 formate dehydrogenase; Provisional
Probab=93.36 E-value=0.59 Score=43.35 Aligned_cols=45 Identities=24% Similarity=0.338 Sum_probs=36.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g 239 (291)
.|++|.|+|.|.+|...++.++.+|. +|++.++.....+..+.++
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g 235 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG 235 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence 46789999999999999999999999 9999988764333333444
No 470
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=93.36 E-value=0.36 Score=43.28 Aligned_cols=87 Identities=15% Similarity=0.088 Sum_probs=51.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc-CCCEEeCCCCCCchHHH-HHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTEFVNPKDHDKPIQQ-VLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~-ga~~~i~~~~~~~~~~~-~v~~~~~gg~d~v~d~~g~ 274 (291)
+|+|+|+|++|....-.+...|. .|+.+++..++++..++- |.. +..... ...+.- .......+.+|+||-|+=.
T Consensus 4 ~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~-~~~~~~~~~~~~~~~~~D~viv~vK~ 80 (305)
T PRK05708 4 TWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ-ASLYAIPAETADAAEPIHRLLLACKA 80 (305)
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc-ceeeccCCCCcccccccCEEEEECCH
Confidence 69999999999876666667788 788888887777766543 331 111111 000000 0000011368999999887
Q ss_pred hHHHHHHHHHhhc
Q 022865 275 VSVMRAALECCHK 287 (291)
Q Consensus 275 ~~~~~~~~~~l~~ 287 (291)
-+ ...+++.+++
T Consensus 81 ~~-~~~al~~l~~ 92 (305)
T PRK05708 81 YD-AEPAVASLAH 92 (305)
T ss_pred Hh-HHHHHHHHHh
Confidence 55 4455555543
No 471
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.35 E-value=0.48 Score=38.57 Aligned_cols=80 Identities=28% Similarity=0.376 Sum_probs=56.3
Q ss_pred CCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhcCCCEEeCCCC--CCchHHHHHHhhcCC--CccE
Q 022865 194 PGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKD--HDKPIQQVLVDLTDG--GVDY 267 (291)
Q Consensus 194 ~g~~vlI~G-~g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~~~~~~ga~~~i~~~~--~~~~~~~~v~~~~~g--g~d~ 267 (291)
++-..||.| ++++|.+++.-+...|+ .++..|-... ..+.++++|...++...+ .+.+....+...... ..|+
T Consensus 8 kglvalvtggasglg~ataerlakqga-sv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGA-SVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCc-eEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 445667875 49999999998888999 6666665554 467778999876664433 234555555554433 7899
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
.+||.|-
T Consensus 87 ~vncagi 93 (260)
T KOG1199|consen 87 LVNCAGI 93 (260)
T ss_pred eeeccce
Confidence 9999985
No 472
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=93.32 E-value=0.38 Score=43.21 Aligned_cols=88 Identities=15% Similarity=0.174 Sum_probs=52.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChH
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~ 276 (291)
+|+|+|+|++|.+..-.+...| ..|+.+.+++. .+..++-|....-..................+.+|+||-++-.-+
T Consensus 2 kI~IlGaGAvG~l~g~~L~~~g-~~V~~~~R~~~-~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~Dlviv~vKa~q 79 (307)
T COG1893 2 KILILGAGAIGSLLGARLAKAG-HDVTLLVRSRR-LEALKKKGLRIEDEGGNFTTPVVAATDAEALGPADLVIVTVKAYQ 79 (307)
T ss_pred eEEEECCcHHHHHHHHHHHhCC-CeEEEEecHHH-HHHHHhCCeEEecCCCccccccccccChhhcCCCCEEEEEecccc
Confidence 6899999999988877777888 47877766665 666666664322111100000000111111127899999887755
Q ss_pred HHHHHHHHhhc
Q 022865 277 VMRAALECCHK 287 (291)
Q Consensus 277 ~~~~~~~~l~~ 287 (291)
...+++.+++
T Consensus 80 -~~~al~~l~~ 89 (307)
T COG1893 80 -LEEALPSLAP 89 (307)
T ss_pred -HHHHHHHhhh
Confidence 5666666554
No 473
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=93.32 E-value=0.33 Score=41.29 Aligned_cols=46 Identities=33% Similarity=0.407 Sum_probs=37.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh----------hhHHHHHhcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP----------KKFDRAKNFG 239 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~----------~~~~~~~~~g 239 (291)
.+.+|+|.|-|.+|..+++++..+|++.|.+.|.+. +.++..++.+
T Consensus 22 ~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~ 77 (217)
T cd05211 22 EGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG 77 (217)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence 578999999999999999999999985666677776 6666665554
No 474
>PLN03013 cysteine synthase
Probab=93.31 E-value=1.4 Score=41.38 Aligned_cols=57 Identities=21% Similarity=0.275 Sum_probs=41.8
Q ss_pred hhcCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhcCCCEEe
Q 022865 188 NTAKVEPGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 188 ~~~~~~~g~~vlI~-G~g~vG~~ai~~a~~~g~~~v~~~~--~~~~~~~~~~~~ga~~~i 244 (291)
+...+.+|.+.+|. .+|..|.+.+.+++.+|++-+++++ .+++|++..+.+|++.++
T Consensus 167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 45556788665565 4599999999999999995444443 345788888999986553
No 475
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=93.29 E-value=1 Score=46.96 Aligned_cols=89 Identities=18% Similarity=0.164 Sum_probs=57.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHc-CCC------------eEEEEcCChhhHHHH-Hhc-CCCE-EeCCCCCCchHHHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAA-GAS------------RVIGIDIDPKKFDRA-KNF-GVTE-FVNPKDHDKPIQQVL 257 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~-g~~------------~v~~~~~~~~~~~~~-~~~-ga~~-~i~~~~~~~~~~~~v 257 (291)
..++|+|+|+|.+|...+..+... ++. .|++.+.+.++.+.+ +.+ +++. .+|+.+ . +.+
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D----~-e~L 642 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSD----S-ESL 642 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCC----H-HHH
Confidence 356899999999999888877654 332 277777777665544 334 3322 233322 1 233
Q ss_pred HhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 258 VDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 258 ~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++.. ++|+|+.|++.......+..|++.+
T Consensus 643 ~~~v~-~~DaVIsalP~~~H~~VAkaAieaG 672 (1042)
T PLN02819 643 LKYVS-QVDVVISLLPASCHAVVAKACIELK 672 (1042)
T ss_pred HHhhc-CCCEEEECCCchhhHHHHHHHHHcC
Confidence 33322 4999999999877777887777653
No 476
>PLN02735 carbamoyl-phosphate synthase
Probab=93.28 E-value=0.44 Score=50.22 Aligned_cols=99 Identities=14% Similarity=0.180 Sum_probs=58.1
Q ss_pred cchhhhhhhhhhcCCCCCCEEEEEcCChH-----------HHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTV-----------GLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 178 ~~~ta~~~~~~~~~~~~g~~vlI~G~g~v-----------G~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
...-+|.+......-..-++|||+|+|++ |..++..++.+|+ +|+.++.+++.......+ +|++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke~G~-~Vi~vd~np~t~~~~~~~-aD~~yi~ 83 (1102)
T PLN02735 6 TVTRAWSAATKAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGY-EVVLINSNPATIMTDPET-ADRTYIA 83 (1102)
T ss_pred cceecccccccCCcccCCCEEEEECCCccccccceeecchHHHHHHHHHHcCC-EEEEEeCCcccccCChhh-CcEEEeC
Confidence 34456665433333333468999999874 5568888889999 899998887532111122 4443321
Q ss_pred CCCCchHHHHHHhhcC-CCccEEEEcCCChHHHHHHH
Q 022865 247 KDHDKPIQQVLVDLTD-GGVDYSFECIGNVSVMRAAL 282 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~-gg~d~v~d~~g~~~~~~~~~ 282 (291)
.. +.+ .+.++.. .++|.|+-+.|+...+..+.
T Consensus 84 p~-~~e---~v~~ii~~e~~D~Iip~~gg~~gl~la~ 116 (1102)
T PLN02735 84 PM-TPE---LVEQVIAKERPDALLPTMGGQTALNLAV 116 (1102)
T ss_pred CC-CHH---HHHHHHHHhCCCEEEECCCchhhHHHHH
Confidence 11 122 2333222 37999999888765554444
No 477
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=93.26 E-value=0.98 Score=39.64 Aligned_cols=79 Identities=15% Similarity=0.216 Sum_probs=48.3
Q ss_pred EEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHH-HhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~--g~~~v~~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+|.|+|.|.+|...++..... +.+.+.+++++.++.+.+ ++++.. .. .++.+.+ ..+|+|++|++
T Consensus 3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~-~~------~~~~ell-----~~~DvVvi~a~ 70 (265)
T PRK13304 3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAK-AC------LSIDELV-----EDVDLVVECAS 70 (265)
T ss_pred EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCe-eE------CCHHHHh-----cCCCEEEEcCC
Confidence 688999999998877665554 453455677777765544 344432 11 1222222 25788888887
Q ss_pred ChHHHHHHHHHhhc
Q 022865 274 NVSVMRAALECCHK 287 (291)
Q Consensus 274 ~~~~~~~~~~~l~~ 287 (291)
.......+.++++.
T Consensus 71 ~~~~~~~~~~al~~ 84 (265)
T PRK13304 71 VNAVEEVVPKSLEN 84 (265)
T ss_pred hHHHHHHHHHHHHc
Confidence 76666666666653
No 478
>PLN03139 formate dehydrogenase; Provisional
Probab=93.25 E-value=0.61 Score=43.24 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=36.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.|++|.|+|.|.+|...++.++.+|. +|++.+++....+..++.|+
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~ 243 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA 243 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence 57799999999999999999999999 89999877544444444443
No 479
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=93.24 E-value=0.2 Score=44.69 Aligned_cols=71 Identities=23% Similarity=0.171 Sum_probs=45.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+++|+|+ |.+|...++.+...|. +|+++++++++.....+.+.. .+..+-.+. +.+.++.. ++|+||++.+
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~D~~~~---~~l~~~~~-~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGE-EVRVLVRPTSDRRNLEGLDVE-IVEGDLRDP---ASLRKAVA-GCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCC-EEEEEEecCccccccccCCce-EEEeeCCCH---HHHHHHHh-CCCEEEEece
Confidence 6899987 9999999998888898 899998877654333333332 222111111 22333222 5899999875
No 480
>PLN02686 cinnamoyl-CoA reductase
Probab=93.22 E-value=0.6 Score=42.92 Aligned_cols=42 Identities=19% Similarity=0.150 Sum_probs=33.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
..+++|||+|+ |.+|...+..+...|+ +|+++.++.++.+.+
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~-~V~~~~r~~~~~~~l 93 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKL 93 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 45789999987 9999999998888999 887766665554433
No 481
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=93.19 E-value=0.6 Score=41.34 Aligned_cols=45 Identities=33% Similarity=0.486 Sum_probs=36.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCe-EEEEcCChhhHHHHHhcCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASR-VIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~-v~~~~~~~~~~~~~~~~ga 240 (291)
.+|+|+|.|.+|.+.+..++..|... |+..+.+.+.++.+.++|.
T Consensus 4 ~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv 49 (279)
T COG0287 4 MKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGV 49 (279)
T ss_pred cEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCc
Confidence 57888899999999999999999743 5777777777777777775
No 482
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=93.17 E-value=0.51 Score=45.12 Aligned_cols=41 Identities=22% Similarity=0.256 Sum_probs=35.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
.+.+++|+|+|++|.+++..+...|+ +|+.++++.++.+.+
T Consensus 331 ~~k~vlIiGaGgiG~aia~~L~~~G~-~V~i~~R~~~~~~~l 371 (477)
T PRK09310 331 NNQHVAIVGAGGAAKAIATTLARAGA-ELLIFNRTKAHAEAL 371 (477)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 56789999999999999999999999 888888888776544
No 483
>PRK06123 short chain dehydrogenase; Provisional
Probab=93.10 E-value=0.63 Score=39.72 Aligned_cols=78 Identities=17% Similarity=0.140 Sum_probs=46.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHH----HHhcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDR----AKNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~~~----~~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++||+|+ |.+|...++.+...|+ +|+.+. +++++.+. +++.+... .+ |..+ ..++.+.+.+.. .+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGY-AVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVAD-EADVLRLFEAVDRELG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-eEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCC-HHHHHHHHHHHHHHhC
Confidence 457899987 9999998888878898 666654 34433322 22334322 22 2222 234444444332 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (248)
T PRK06123 80 RLDALVNNAGI 90 (248)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 484
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=93.10 E-value=0.92 Score=40.94 Aligned_cols=71 Identities=23% Similarity=0.257 Sum_probs=50.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
-.+++|.|+|-|.+|...++.++..|. +|++.++.....+.+.+.|.. +. ++.+.+. ..|+|+-++
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~-------sl~Eaak-----~ADVV~llL 79 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM-------SVSEAVR-----TAQVVQMLL 79 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC-------CHHHHHh-----cCCEEEEeC
Confidence 367899999999999999999999999 787776655555566666652 11 1222222 479999988
Q ss_pred CChHH
Q 022865 273 GNVSV 277 (291)
Q Consensus 273 g~~~~ 277 (291)
..+..
T Consensus 80 Pd~~t 84 (335)
T PRK13403 80 PDEQQ 84 (335)
T ss_pred CChHH
Confidence 86543
No 485
>PLN02427 UDP-apiose/xylose synthase
Probab=93.09 E-value=0.55 Score=43.35 Aligned_cols=77 Identities=14% Similarity=0.172 Sum_probs=47.2
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCC------CEEeCCCCCCchHHHHHHhhcCC
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGV------TEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ga------~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
.-+..+|||+|+ |-+|...++.+... |. +|++++++.++.+.+...+. -+.+..+-.+. ..+.++..
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~-~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~---~~l~~~~~- 85 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPH-KVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHD---SRLEGLIK- 85 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCC-EEEEEecCchhhhhhhccccccCCCCeEEEEcCCCCh---HHHHHHhh-
Confidence 334568999987 99999888888777 46 89999877666554433221 11221111111 22333322
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
++|+||.+++
T Consensus 86 ~~d~ViHlAa 95 (386)
T PLN02427 86 MADLTINLAA 95 (386)
T ss_pred cCCEEEEccc
Confidence 5899999986
No 486
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=93.07 E-value=0.22 Score=41.01 Aligned_cols=71 Identities=21% Similarity=0.258 Sum_probs=46.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
.|.|+|+ |.+|...++-|+..|. .|+++.++++|....... .+.-.+- -+. ..+.+.. .|+|+||++.|..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~----~i~q~Di-fd~-~~~a~~l-~g~DaVIsA~~~~ 73 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGV----TILQKDI-FDL-TSLASDL-AGHDAVISAFGAG 73 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccc----eeecccc-cCh-hhhHhhh-cCCceEEEeccCC
Confidence 4788888 9999999999999999 899999999987543211 1111110 011 1122211 2799999988753
No 487
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=93.07 E-value=0.61 Score=47.06 Aligned_cols=80 Identities=23% Similarity=0.386 Sum_probs=54.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
.+|.|+|.|.+|.+.++.++..|. .+|+++++++++++.++++|+.. ... .+..+.+ ..+|+||.|++.
T Consensus 4 ~~I~IIG~G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~---~~~--~~~~~~~-----~~aDvVilavp~ 73 (735)
T PRK14806 4 GRVVVIGLGLIGGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVID---RGE--EDLAEAV-----SGADVIVLAVPV 73 (735)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCC---ccc--CCHHHHh-----cCCCEEEECCCH
Confidence 679999999999999999998883 37999999999988888877521 011 1121222 146777777775
Q ss_pred hHHHHHHHHHhh
Q 022865 275 VSVMRAALECCH 286 (291)
Q Consensus 275 ~~~~~~~~~~l~ 286 (291)
. .+...++.++
T Consensus 74 ~-~~~~vl~~l~ 84 (735)
T PRK14806 74 L-AMEKVLADLK 84 (735)
T ss_pred H-HHHHHHHHHH
Confidence 3 3445444443
No 488
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=93.06 E-value=0.33 Score=37.64 Aligned_cols=78 Identities=22% Similarity=0.382 Sum_probs=42.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHHh-cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
-+|-|+|+|.+|......++..|+ .|..+- ++.++.+.+.+ ++...+.+..+ .. ..+|++|-++.
T Consensus 11 l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~-----------~~-~~aDlv~iavp 77 (127)
T PF10727_consen 11 LKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE-----------IL-RDADLVFIAVP 77 (127)
T ss_dssp -EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG-----------GG-CC-SEEEE-S-
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc-----------cc-ccCCEEEEEec
Confidence 478999999999999999999998 788874 44445555543 33322222111 11 14666666666
Q ss_pred ChHHHHHHHHHhhc
Q 022865 274 NVSVMRAALECCHK 287 (291)
Q Consensus 274 ~~~~~~~~~~~l~~ 287 (291)
... +....+.|+.
T Consensus 78 Dda-I~~va~~La~ 90 (127)
T PF10727_consen 78 DDA-IAEVAEQLAQ 90 (127)
T ss_dssp CCH-HHHHHHHHHC
T ss_pred hHH-HHHHHHHHHH
Confidence 643 4444444443
No 489
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.06 E-value=0.41 Score=39.09 Aligned_cols=79 Identities=19% Similarity=0.158 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC--CccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g--g~d~v~d 270 (291)
.|..|++.|+ -++|...++-+...|+ +|+++.++++.+.-+.++-...++-..-+-..| +.+.+.... .+|..++
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~w-ea~~~~l~~v~pidgLVN 83 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETPSLIIPIVGDLSAW-EALFKLLVPVFPIDGLVN 83 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCCcceeeeEecccHH-HHHHHhhcccCchhhhhc
Confidence 5678999998 6899999999999999 999999999987766555433322111111223 233343332 5677777
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
..|.
T Consensus 84 NAgv 87 (245)
T KOG1207|consen 84 NAGV 87 (245)
T ss_pred cchh
Confidence 6663
No 490
>PRK07411 hypothetical protein; Validated
Probab=93.03 E-value=0.69 Score=43.04 Aligned_cols=35 Identities=29% Similarity=0.326 Sum_probs=31.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|..+++.+.++|..+++.+|.+.
T Consensus 38 ~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D~ 72 (390)
T PRK07411 38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDV 72 (390)
T ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 35899999999999999999999999999887653
No 491
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=93.03 E-value=0.89 Score=40.37 Aligned_cols=43 Identities=23% Similarity=0.383 Sum_probs=35.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~ 46 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA 46 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 68899999999887777777888 89999999888777766654
No 492
>PRK04266 fibrillarin; Provisional
Probab=93.03 E-value=1.2 Score=38.07 Aligned_cols=97 Identities=12% Similarity=0.142 Sum_probs=57.2
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC----CCEEeCCCCCCchHHHHHHhhcCC
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG----VTEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g----a~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
+...++++++||=+|+|. |.....+++..+..+|+++|.+++.++.+.+.. .-..+..+...+. ....+ ..
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~---~~~~l-~~ 140 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPE---RYAHV-VE 140 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcc---hhhhc-cc
Confidence 346788999988888755 556666777765348999999998766443221 1122211111110 00111 13
Q ss_pred CccEEEEcCCCh----HHHHHHHHHhhccCC
Q 022865 264 GVDYSFECIGNV----SVMRAALECCHKVSG 290 (291)
Q Consensus 264 g~d~v~d~~g~~----~~~~~~~~~l~~~gg 290 (291)
.+|+|+-....+ ..+..+.+.|+++ |
T Consensus 141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G 170 (226)
T PRK04266 141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-G 170 (226)
T ss_pred cCCEEEECCCChhHHHHHHHHHHHhcCCC-c
Confidence 599998654443 2367788889998 5
No 493
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=93.01 E-value=0.17 Score=42.70 Aligned_cols=97 Identities=21% Similarity=0.275 Sum_probs=61.3
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhc---
Q 022865 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT--- 261 (291)
Q Consensus 190 ~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~--- 261 (291)
.+....++||-+|.+. |+.++.+|+++. -.+|+.++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 41 ~~~~~~k~vLEIGt~~-GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~~ 117 (205)
T PF01596_consen 41 VRLTRPKRVLEIGTFT-GYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELANDG 117 (205)
T ss_dssp HHHHT-SEEEEESTTT-SHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHTT
T ss_pred HHhcCCceEEEecccc-ccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhcc
Confidence 3345567999998754 888999998874 2399999999999888854 45433222221 22334444433
Q ss_pred -CCCccEEEEcCCC---hHHHHHHHHHhhccC
Q 022865 262 -DGGVDYSFECIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 262 -~gg~d~v~d~~g~---~~~~~~~~~~l~~~g 289 (291)
.+.||+||-=..- ...+..++++|+++|
T Consensus 118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~gg 149 (205)
T PF01596_consen 118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPGG 149 (205)
T ss_dssp TTTSEEEEEEESTGGGHHHHHHHHHHHEEEEE
T ss_pred CCCceeEEEEcccccchhhHHHHHhhhccCCe
Confidence 2369977654332 344777888888873
No 494
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=92.99 E-value=0.37 Score=42.87 Aligned_cols=86 Identities=22% Similarity=0.235 Sum_probs=51.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC--CchHHHHHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH--DKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~--~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+|+|+|+|.+|.+.+..+...|. .|+.+++ +++.+..++.|........+. .........+. ...+|++|-|+..
T Consensus 2 kI~IiG~G~iG~~~a~~L~~~g~-~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~vilavk~ 78 (305)
T PRK12921 2 RIAVVGAGAVGGTFGGRLLEAGR-DVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEEL-TGPFDLVILAVKA 78 (305)
T ss_pred eEEEECCCHHHHHHHHHHHHCCC-ceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHc-cCCCCEEEEEecc
Confidence 58899999999987777777787 7888888 777777766553211110000 00000001111 1368999998887
Q ss_pred hHHHHHHHHHhh
Q 022865 275 VSVMRAALECCH 286 (291)
Q Consensus 275 ~~~~~~~~~~l~ 286 (291)
.. ++.+++.++
T Consensus 79 ~~-~~~~~~~l~ 89 (305)
T PRK12921 79 YQ-LDAAIPDLK 89 (305)
T ss_pred cC-HHHHHHHHH
Confidence 54 455555544
No 495
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.96 E-value=0.69 Score=39.94 Aligned_cols=79 Identities=15% Similarity=0.164 Sum_probs=46.9
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCC-----------hhhH----HHHHhcCCCE-Ee--CCCCCCch
Q 022865 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDID-----------PKKF----DRAKNFGVTE-FV--NPKDHDKP 252 (291)
Q Consensus 194 ~g~~vlI~G~g---~vG~~ai~~a~~~g~~~v~~~~~~-----------~~~~----~~~~~~ga~~-~i--~~~~~~~~ 252 (291)
+++++||+|++ ++|...+..+...|+ +|+.+.+. .+++ +.+++.|... .+ |..+ .++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~-~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~-~~~ 82 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGA-DIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQ-NDA 82 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHH
Confidence 57899999883 799998888888999 77775321 1111 2223345432 22 2222 234
Q ss_pred HHHHHHhhc--CCCccEEEEcCCC
Q 022865 253 IQQVLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 253 ~~~~v~~~~--~gg~d~v~d~~g~ 274 (291)
+.+.+.+.. .+.+|++|.+.|.
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~ 106 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAY 106 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCC
Confidence 444444433 2368999999874
No 496
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=92.95 E-value=0.22 Score=43.21 Aligned_cols=99 Identities=17% Similarity=0.233 Sum_probs=59.5
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEE--eCCCCCCchHHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEF--VNPKDHDKPIQQVLV 258 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~--i~~~~~~~~~~~~v~ 258 (291)
+.....+.||++|+=-|.|. |.+...++++.| -.+|+..+.++++.+.+++ +|.+.. +...+ .. .+...
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D--v~-~~g~~ 107 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD--VC-EEGFD 107 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES---GG-CG--S
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc--ee-ccccc
Confidence 55678899999998887655 777888888776 3489999999999887753 555432 21111 00 00111
Q ss_pred hhcCCCcc-EEEEcCCChHHHHHHHHHh-hcc
Q 022865 259 DLTDGGVD-YSFECIGNVSVMRAALECC-HKV 288 (291)
Q Consensus 259 ~~~~gg~d-~v~d~~g~~~~~~~~~~~l-~~~ 288 (291)
+-....+| +++|--.....+..+.+.| +++
T Consensus 108 ~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g 139 (247)
T PF08704_consen 108 EELESDFDAVFLDLPDPWEAIPHAKRALKKPG 139 (247)
T ss_dssp TT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE
T ss_pred ccccCcccEEEEeCCCHHHHHHHHHHHHhcCC
Confidence 11123688 4556555556899999999 666
No 497
>PRK05599 hypothetical protein; Provisional
Probab=92.93 E-value=0.68 Score=39.78 Aligned_cols=75 Identities=13% Similarity=0.205 Sum_probs=46.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCC--EEe--CCCCCCchHHHHHHhhc--CCCc
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVT--EFV--NPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~--~~i--~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
+++|+|+ +++|...+..+. .|. +|+.+++++++++.+ ++.+.+ ..+ |..+ .++..+.+.+.. .+++
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQD-LDTHRELVKQTQELAGEI 78 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCC-HHHHHHHHHHHHHhcCCC
Confidence 6889987 999988776655 487 888888888776544 223432 222 2222 233333333322 2479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+++++.|.
T Consensus 79 d~lv~nag~ 87 (246)
T PRK05599 79 SLAVVAFGI 87 (246)
T ss_pred CEEEEecCc
Confidence 999998884
No 498
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.90 E-value=0.53 Score=41.74 Aligned_cols=40 Identities=30% Similarity=0.352 Sum_probs=33.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
.+|.|+|+|.+|...++.+...|. +|+.++.++++++.++
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~~ 43 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGF-DVTIYDISDEALEKAK 43 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHHH
Confidence 479999999999988888878898 8999999988766554
No 499
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=92.90 E-value=0.7 Score=41.75 Aligned_cols=85 Identities=20% Similarity=0.149 Sum_probs=54.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe-CC-C----C-CCchHHHHHHhhcCCCccEE
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NP-K----D-HDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i-~~-~----~-~~~~~~~~v~~~~~gg~d~v 268 (291)
-+|.|+|+|.+|...+..+...|. .|++.++++++.+.+.+.+..... .. . - ...+..+.+ ..+|+|
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V 78 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA 78 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence 368999999999998888888888 899999988877666553211000 00 0 0 001121111 258999
Q ss_pred EEcCCChHHHHHHHHHhhc
Q 022865 269 FECIGNVSVMRAALECCHK 287 (291)
Q Consensus 269 ~d~~g~~~~~~~~~~~l~~ 287 (291)
|-++.... +...++.+++
T Consensus 79 i~~v~~~~-~~~v~~~l~~ 96 (328)
T PRK14618 79 VVAVPSKA-LRETLAGLPR 96 (328)
T ss_pred EEECchHH-HHHHHHhcCc
Confidence 99998865 5666665554
No 500
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=92.89 E-value=0.45 Score=42.88 Aligned_cols=77 Identities=21% Similarity=0.201 Sum_probs=45.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHH-HhcCCC--EEeCCCCCCchHHHHHHhhcCCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRA-KNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~-~~~ga~--~~i~~~~~~~~~~~~v~~~~~gg~d~v 268 (291)
++.+|||+|+ |.+|...+..+...| ..+|+++++++.+...+ ..+... .++..+-.+. +.+.+... ++|+|
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~---~~l~~~~~-~iD~V 78 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDK---ERLTRALR-GVDYV 78 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCH---HHHHHHHh-cCCEE
Confidence 3678999987 999998887776665 23788887776554322 233211 1221111111 22333222 58999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|.++|.
T Consensus 79 ih~Ag~ 84 (324)
T TIGR03589 79 VHAAAL 84 (324)
T ss_pred EECccc
Confidence 999874
Done!