Query 022870
Match_columns 291
No_of_seqs 499 out of 1267
Neff 11.8
Searched_HMMs 29240
Date Mon Mar 25 12:31:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022870.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022870hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 1.4E-42 4.9E-47 272.2 31.6 259 9-290 4-266 (304)
2 3iz6_a 40S ribosomal protein R 100.0 1.6E-40 5.5E-45 268.4 28.8 265 5-286 53-378 (380)
3 1vyh_C Platelet-activating fac 100.0 1.3E-40 4.4E-45 271.5 28.0 256 10-290 100-376 (410)
4 4gqb_B Methylosome protein 50; 100.0 1.5E-40 5.2E-45 264.3 26.9 245 16-286 80-334 (344)
5 1got_B GT-beta; complex (GTP-b 100.0 2.8E-39 9.5E-44 257.4 32.1 257 7-290 44-308 (340)
6 3ow8_A WD repeat-containing pr 100.0 1.3E-39 4.3E-44 257.2 28.2 253 10-290 24-286 (321)
7 4g56_B MGC81050 protein; prote 100.0 4.6E-40 1.6E-44 263.4 25.4 253 11-289 87-349 (357)
8 1vyh_C Platelet-activating fac 100.0 1.7E-39 5.7E-44 264.9 27.7 248 8-282 140-410 (410)
9 3ow8_A WD repeat-containing pr 100.0 1.2E-38 4E-43 251.6 29.8 244 11-282 73-320 (321)
10 2pbi_B Guanine nucleotide-bind 100.0 2.5E-38 8.7E-43 253.1 32.1 248 8-280 54-354 (354)
11 2pm7_B Protein transport prote 100.0 3.4E-38 1.2E-42 246.5 29.6 256 11-283 2-285 (297)
12 4aow_A Guanine nucleotide-bind 100.0 1E-37 3.4E-42 248.3 28.8 251 10-285 30-339 (340)
13 3frx_A Guanine nucleotide-bind 100.0 4E-38 1.4E-42 248.5 25.4 218 9-290 8-234 (319)
14 3bg1_A Protein SEC13 homolog; 100.0 8.6E-38 3E-42 246.3 26.9 255 12-283 7-293 (316)
15 4ery_A WD repeat-containing pr 100.0 8.6E-37 3E-41 240.3 30.1 255 9-290 14-275 (312)
16 3frx_A Guanine nucleotide-bind 100.0 5.7E-37 1.9E-41 241.9 28.7 246 9-284 56-318 (319)
17 4ery_A WD repeat-containing pr 100.0 2.5E-36 8.6E-41 237.6 31.8 252 7-282 54-311 (312)
18 2xzm_R RACK1; ribosome, transl 100.0 5.2E-37 1.8E-41 244.7 27.0 249 9-285 67-342 (343)
19 1got_B GT-beta; complex (GTP-b 100.0 3E-36 1E-40 239.9 31.1 246 8-280 87-340 (340)
20 2ynn_A Coatomer subunit beta'; 100.0 1.2E-36 4.2E-41 238.5 28.1 251 8-284 45-303 (304)
21 1nr0_A Actin interacting prote 100.0 1.4E-36 4.9E-41 259.5 30.2 250 16-290 16-277 (611)
22 1erj_A Transcriptional repress 100.0 2.7E-36 9.3E-41 244.8 29.2 238 20-284 125-390 (393)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.7E-36 5.8E-41 241.8 26.9 256 9-288 6-340 (345)
24 4g56_B MGC81050 protein; prote 100.0 1.8E-36 6.1E-41 242.6 25.3 253 14-289 38-307 (357)
25 1nr0_A Actin interacting prote 100.0 7.3E-36 2.5E-40 255.2 30.4 259 8-288 49-360 (611)
26 4gqb_B Methylosome protein 50; 100.0 2.4E-36 8.2E-41 240.2 23.3 249 15-288 27-294 (344)
27 4gga_A P55CDC, cell division c 100.0 4.1E-35 1.4E-39 239.9 30.4 250 9-285 136-397 (420)
28 4ggc_A P55CDC, cell division c 100.0 1.1E-35 3.9E-40 234.3 26.0 266 4-284 7-316 (318)
29 3zwl_B Eukaryotic translation 100.0 4.9E-35 1.7E-39 235.1 29.3 249 11-287 25-350 (369)
30 3f3f_A Nucleoporin SEH1; struc 100.0 3.5E-35 1.2E-39 234.0 28.2 264 10-290 3-344 (351)
31 3jrp_A Fusion protein of prote 100.0 3.2E-36 1.1E-40 242.9 21.4 259 9-285 2-289 (379)
32 1erj_A Transcriptional repress 100.0 4.9E-35 1.7E-39 237.4 28.3 256 16-290 62-348 (393)
33 4e54_B DNA damage-binding prot 100.0 4.2E-36 1.4E-40 246.9 21.1 219 9-290 110-334 (435)
34 2hes_X YDR267CP; beta-propelle 100.0 4.2E-35 1.4E-39 232.3 25.9 252 10-284 48-329 (330)
35 2hes_X YDR267CP; beta-propelle 100.0 5.3E-35 1.8E-39 231.7 25.4 212 8-284 4-231 (330)
36 1sq9_A Antiviral protein SKI8; 100.0 6.4E-35 2.2E-39 237.0 26.3 258 9-290 7-329 (397)
37 2xzm_R RACK1; ribosome, transl 100.0 3.3E-34 1.1E-38 228.4 28.8 250 9-286 12-288 (343)
38 4aez_A CDC20, WD repeat-contai 100.0 1.8E-33 6E-38 228.9 31.3 253 9-289 124-386 (401)
39 4a11_B DNA excision repair pro 100.0 6.1E-34 2.1E-38 231.8 28.6 267 9-288 34-370 (408)
40 3dm0_A Maltose-binding peripla 100.0 2.5E-34 8.6E-39 249.3 27.5 219 10-289 374-598 (694)
41 3mkq_A Coatomer beta'-subunit; 100.0 3E-34 1E-38 253.1 27.6 259 9-290 4-266 (814)
42 3dm0_A Maltose-binding peripla 100.0 9E-34 3.1E-38 245.8 28.6 248 9-283 421-693 (694)
43 3gre_A Serine/threonine-protei 100.0 2.8E-34 9.6E-39 236.2 24.1 258 7-290 51-366 (437)
44 3v7d_B Cell division control p 100.0 1.1E-33 3.8E-38 234.4 27.8 252 6-288 109-386 (464)
45 4h5i_A Guanine nucleotide-exch 100.0 1.3E-34 4.6E-39 232.3 21.5 202 17-284 132-344 (365)
46 3odt_A Protein DOA1; ubiquitin 100.0 2.3E-33 7.9E-38 220.5 27.9 251 7-290 7-262 (313)
47 1sq9_A Antiviral protein SKI8; 100.0 2.2E-34 7.6E-39 233.8 22.3 260 9-285 53-397 (397)
48 2ymu_A WD-40 repeat protein; u 100.0 1.4E-33 4.7E-38 239.9 28.0 240 8-280 334-577 (577)
49 1k8k_C P40, ARP2/3 complex 41 100.0 1E-33 3.5E-38 227.9 25.6 244 14-283 4-274 (372)
50 2j04_B YDR362CP, TAU91; beta p 100.0 6.9E-35 2.4E-39 242.9 19.0 255 8-284 124-429 (524)
51 2pm9_A Protein WEB1, protein t 100.0 1.1E-34 3.7E-39 237.0 19.6 251 9-284 104-415 (416)
52 1gxr_A ESG1, transducin-like e 100.0 7.8E-33 2.7E-37 219.6 29.6 247 13-288 46-301 (337)
53 4e54_B DNA damage-binding prot 100.0 3.3E-33 1.1E-37 229.6 27.3 260 10-287 156-434 (435)
54 3ei3_B DNA damage-binding prot 100.0 1.9E-33 6.6E-38 227.3 25.2 253 8-290 63-346 (383)
55 3i2n_A WD repeat-containing pr 100.0 3.9E-33 1.3E-37 223.2 26.7 261 1-285 1-293 (357)
56 2pm9_A Protein WEB1, protein t 100.0 1.1E-33 3.8E-38 231.0 23.7 249 16-286 65-340 (416)
57 3vl1_A 26S proteasome regulato 100.0 4.7E-33 1.6E-37 227.6 26.6 235 7-284 128-366 (420)
58 3v7d_B Cell division control p 100.0 1.8E-32 6.1E-37 227.1 29.9 254 7-289 151-427 (464)
59 3dw8_B Serine/threonine-protei 100.0 1.1E-33 3.7E-38 233.2 22.5 253 17-288 27-378 (447)
60 1yfq_A Cell cycle arrest prote 100.0 1.1E-32 3.7E-37 219.4 26.6 249 11-290 4-289 (342)
61 1r5m_A SIR4-interacting protei 100.0 3.7E-33 1.3E-37 228.3 23.8 238 17-285 107-363 (425)
62 2xyi_A Probable histone-bindin 100.0 3.6E-33 1.2E-37 229.1 23.6 253 12-285 122-412 (430)
63 3jro_A Fusion protein of prote 100.0 6.8E-34 2.3E-38 248.1 20.1 256 11-284 2-286 (753)
64 3dwl_C Actin-related protein 2 100.0 5.1E-34 1.7E-38 230.2 17.7 247 13-282 6-280 (377)
65 2ymu_A WD-40 repeat protein; u 100.0 4.8E-32 1.6E-36 230.4 30.3 249 7-289 292-544 (577)
66 2aq5_A Coronin-1A; WD40 repeat 100.0 1.3E-32 4.4E-37 223.9 25.6 213 9-285 72-301 (402)
67 3i2n_A WD repeat-containing pr 100.0 4.3E-33 1.5E-37 222.9 21.9 251 16-286 63-356 (357)
68 1gxr_A ESG1, transducin-like e 100.0 1.6E-31 5.5E-36 212.1 29.4 237 16-281 95-335 (337)
69 3vu4_A KMHSV2; beta-propeller 100.0 1.2E-32 4.2E-37 220.2 22.8 242 9-285 10-273 (355)
70 3mmy_A MRNA export factor; mRN 100.0 8.4E-32 2.9E-36 216.1 27.5 264 6-290 27-311 (368)
71 1k8k_C P40, ARP2/3 complex 41 100.0 2.4E-32 8.2E-37 219.9 24.3 252 10-286 44-364 (372)
72 3k26_A Polycomb protein EED; W 100.0 6E-33 2.1E-37 222.7 20.7 257 13-286 13-321 (366)
73 3k26_A Polycomb protein EED; W 100.0 2.1E-32 7.2E-37 219.6 23.3 241 17-283 68-366 (366)
74 3ei3_B DNA damage-binding prot 100.0 5.4E-32 1.9E-36 218.9 25.6 256 9-283 107-382 (383)
75 4aez_A CDC20, WD repeat-contai 100.0 7.8E-32 2.7E-36 219.2 26.5 251 7-288 78-341 (401)
76 3sfz_A APAF-1, apoptotic pepti 100.0 9.7E-32 3.3E-36 246.8 30.1 259 10-283 607-913 (1249)
77 1r5m_A SIR4-interacting protei 100.0 1.1E-31 3.7E-36 219.6 25.9 249 7-283 138-425 (425)
78 3vl1_A 26S proteasome regulato 100.0 3.1E-32 1.1E-36 222.8 22.5 214 13-286 93-325 (420)
79 3odt_A Protein DOA1; ubiquitin 100.0 1.5E-31 5.1E-36 210.2 25.4 245 8-288 49-301 (313)
80 2w18_A PALB2, fancn, partner a 100.0 2.3E-32 7.7E-37 210.8 20.1 208 18-282 111-356 (356)
81 2j04_B YDR362CP, TAU91; beta p 100.0 3.8E-32 1.3E-36 226.5 23.0 250 12-286 201-520 (524)
82 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-30 4.1E-35 215.1 30.7 246 7-290 148-398 (445)
83 1pgu_A Actin interacting prote 100.0 2.3E-31 7.8E-36 227.6 27.1 254 16-290 16-290 (615)
84 2oaj_A Protein SNI1; WD40 repe 100.0 7.5E-32 2.6E-36 238.6 24.5 214 13-288 12-247 (902)
85 4gq1_A NUP37; propeller, trans 100.0 1.9E-32 6.6E-37 222.1 18.6 232 11-282 129-388 (393)
86 1p22_A F-BOX/WD-repeat protein 100.0 1.6E-31 5.4E-36 219.7 24.2 245 7-287 162-418 (435)
87 3mmy_A MRNA export factor; mRN 100.0 1.2E-31 4.3E-36 215.1 23.1 245 12-281 80-344 (368)
88 1p22_A F-BOX/WD-repeat protein 100.0 7.5E-31 2.6E-35 215.6 26.9 238 11-285 126-367 (435)
89 4gga_A P55CDC, cell division c 100.0 2.6E-30 9E-35 211.5 28.5 256 6-290 89-360 (420)
90 3iz6_a 40S ribosomal protein R 100.0 7.5E-31 2.6E-35 211.9 23.5 231 40-289 46-286 (380)
91 3dwl_C Actin-related protein 2 100.0 1E-31 3.5E-36 216.7 18.3 247 9-281 46-377 (377)
92 3mkq_A Coatomer beta'-subunit; 100.0 2.7E-30 9.3E-35 227.9 28.9 254 7-285 44-304 (814)
93 3gre_A Serine/threonine-protei 100.0 2.2E-30 7.4E-35 213.0 25.3 257 11-280 105-437 (437)
94 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.7E-30 1.9E-34 211.1 27.6 244 9-290 109-355 (445)
95 3sfz_A APAF-1, apoptotic pepti 100.0 7.1E-30 2.4E-34 234.5 30.3 257 7-288 646-1039(1249)
96 2oaj_A Protein SNI1; WD40 repe 100.0 1.2E-30 4E-35 231.1 23.7 261 13-288 146-610 (902)
97 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.1E-30 2.1E-34 211.1 26.2 210 13-284 97-342 (450)
98 1pgu_A Actin interacting prote 100.0 2.7E-29 9.1E-34 214.9 27.0 256 9-290 54-335 (615)
99 2aq5_A Coronin-1A; WD40 repeat 100.0 4.5E-30 1.5E-34 208.9 19.4 213 9-286 122-345 (402)
100 1yfq_A Cell cycle arrest prote 100.0 2.6E-29 9E-34 199.9 23.4 240 11-280 49-321 (342)
101 1l0q_A Surface layer protein; 100.0 3.3E-28 1.1E-32 197.1 30.1 252 8-290 22-282 (391)
102 3lrv_A PRE-mRNA-splicing facto 100.0 2.4E-30 8.2E-35 206.2 16.6 199 25-288 43-249 (343)
103 2pbi_B Guanine nucleotide-bind 100.0 4.9E-29 1.7E-33 199.3 24.2 213 51-288 55-276 (354)
104 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.9E-29 6.6E-34 208.1 21.3 209 18-290 4-278 (450)
105 3dw8_B Serine/threonine-protei 100.0 7.8E-29 2.7E-33 204.2 22.3 249 10-282 73-445 (447)
106 3lrv_A PRE-mRNA-splicing facto 100.0 8.3E-29 2.8E-33 197.3 21.5 209 9-285 69-294 (343)
107 2j04_A TAU60, YPL007P, hypothe 100.0 1.2E-28 4.3E-33 201.8 21.7 199 16-282 83-296 (588)
108 2pm7_B Protein transport prote 100.0 1E-27 3.4E-32 187.2 23.9 214 9-240 44-285 (297)
109 2j04_A TAU60, YPL007P, hypothe 100.0 1.5E-28 5.1E-33 201.3 18.8 199 15-286 12-257 (588)
110 4ggc_A P55CDC, cell division c 100.0 3.1E-27 1.1E-31 186.0 25.0 214 8-240 55-315 (318)
111 3bws_A Protein LP49; two-domai 100.0 5.3E-27 1.8E-31 192.6 26.0 242 13-283 164-432 (433)
112 3fm0_A Protein CIAO1; WDR39,SG 100.0 1E-27 3.5E-32 191.0 20.3 208 51-282 6-224 (345)
113 4gq1_A NUP37; propeller, trans 100.0 1.4E-28 4.9E-33 199.3 15.2 223 16-289 87-354 (393)
114 3bws_A Protein LP49; two-domai 100.0 6.3E-27 2.2E-31 192.1 24.5 254 10-290 115-397 (433)
115 3vu4_A KMHSV2; beta-propeller 100.0 4.8E-26 1.6E-30 182.0 28.1 232 20-284 60-337 (355)
116 4h5i_A Guanine nucleotide-exch 100.0 2.3E-26 7.7E-31 184.5 26.3 249 18-290 14-307 (365)
117 4aow_A Guanine nucleotide-bind 100.0 1.5E-26 5.1E-31 183.8 24.3 221 48-290 26-253 (340)
118 3bg1_A Protein SEC13 homolog; 100.0 9.6E-27 3.3E-31 183.2 20.3 211 10-240 49-293 (316)
119 1l0q_A Surface layer protein; 100.0 1.1E-25 3.7E-30 182.4 26.8 231 31-290 3-240 (391)
120 3f3f_A Nucleoporin SEH1; struc 100.0 2.5E-26 8.4E-31 182.8 22.1 216 9-247 48-343 (351)
121 2xyi_A Probable histone-bindin 99.9 1.6E-25 5.6E-30 183.6 25.0 244 19-283 46-353 (430)
122 4a11_B DNA excision repair pro 99.9 2.4E-25 8.2E-30 181.0 25.0 249 15-283 96-405 (408)
123 3jrp_A Fusion protein of prote 99.9 1E-25 3.5E-30 181.4 21.8 215 9-240 46-287 (379)
124 2w18_A PALB2, fancn, partner a 99.9 1.3E-26 4.4E-31 178.9 15.4 171 8-239 168-356 (356)
125 3zwl_B Eukaryotic translation 99.9 1.7E-24 5.7E-29 173.7 22.1 223 52-290 24-256 (369)
126 3jro_A Fusion protein of prote 99.9 8E-25 2.7E-29 191.1 21.0 215 9-240 44-285 (753)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.7E-23 9.3E-28 169.4 26.6 207 9-286 169-390 (415)
128 1nir_A Nitrite reductase; hemo 99.9 2.6E-23 8.9E-28 174.6 26.7 261 7-287 168-462 (543)
129 3u4y_A Uncharacterized protein 99.9 3.1E-22 1.1E-26 158.4 25.5 253 7-286 29-307 (331)
130 2ojh_A Uncharacterized protein 99.9 3.6E-22 1.2E-26 155.1 20.7 209 11-286 34-261 (297)
131 1nir_A Nitrite reductase; hemo 99.9 5.7E-22 1.9E-26 166.5 22.9 209 25-290 144-362 (543)
132 3vgz_A Uncharacterized protein 99.9 1.1E-20 3.7E-25 150.7 28.0 250 17-290 39-310 (353)
133 2hqs_A Protein TOLB; TOLB, PAL 99.9 8.2E-22 2.8E-26 160.7 20.9 210 9-287 106-348 (415)
134 1ri6_A Putative isomerase YBHE 99.9 3.9E-21 1.3E-25 152.6 23.4 253 16-286 35-313 (343)
135 2oit_A Nucleoporin 214KDA; NH2 99.9 3.6E-22 1.2E-26 163.4 16.8 203 17-284 35-279 (434)
136 1pby_B Quinohemoprotein amine 99.9 1.1E-20 3.7E-25 149.7 23.6 253 9-290 22-317 (337)
137 3hfq_A Uncharacterized protein 99.9 9.4E-21 3.2E-25 151.0 23.3 225 11-287 78-323 (347)
138 2ecf_A Dipeptidyl peptidase IV 99.9 1.5E-20 5E-25 164.4 23.7 238 18-282 36-366 (741)
139 3u4y_A Uncharacterized protein 99.9 5.5E-20 1.9E-24 145.4 23.9 239 25-286 4-255 (331)
140 3o4h_A Acylamino-acid-releasin 99.9 2.2E-21 7.7E-26 165.0 15.9 241 17-287 20-278 (582)
141 1jmx_B Amine dehydrogenase; ox 99.9 7.2E-20 2.5E-24 145.7 21.9 249 23-290 4-332 (349)
142 2oit_A Nucleoporin 214KDA; NH2 99.9 3.3E-20 1.1E-24 151.8 18.5 161 17-240 91-278 (434)
143 1xfd_A DIP, dipeptidyl aminope 99.9 2.4E-20 8.1E-25 162.6 17.3 210 19-288 17-294 (723)
144 3scy_A Hypothetical bacterial 99.8 7.5E-18 2.5E-22 134.9 30.2 250 17-288 48-344 (361)
145 2ecf_A Dipeptidyl peptidase IV 99.8 1E-19 3.6E-24 159.0 20.5 241 20-283 110-413 (741)
146 3vgz_A Uncharacterized protein 99.8 1.6E-18 5.3E-23 138.2 23.7 238 9-273 80-334 (353)
147 2z3z_A Dipeptidyl aminopeptida 99.8 7.9E-19 2.7E-23 152.7 21.8 251 11-285 113-437 (706)
148 3hfq_A Uncharacterized protein 99.8 2.4E-18 8.2E-23 137.0 22.1 217 16-283 37-271 (347)
149 1ri6_A Putative isomerase YBHE 99.8 3.1E-18 1E-22 135.9 22.2 228 32-282 7-261 (343)
150 2ojh_A Uncharacterized protein 99.8 5E-18 1.7E-22 131.7 21.3 183 35-282 17-203 (297)
151 2z3z_A Dipeptidyl aminopeptida 99.8 2E-18 6.8E-23 150.1 21.1 245 19-285 82-393 (706)
152 1xfd_A DIP, dipeptidyl aminope 99.8 2E-18 6.8E-23 150.5 20.7 258 8-283 47-393 (723)
153 2oiz_A Aromatic amine dehydrog 99.8 7.3E-18 2.5E-22 134.8 22.2 262 8-290 41-343 (361)
154 1k32_A Tricorn protease; prote 99.8 1.4E-18 4.9E-23 157.0 19.1 242 10-285 237-504 (1045)
155 1z68_A Fibroblast activation p 99.8 3.3E-19 1.1E-23 155.4 13.4 204 22-287 19-295 (719)
156 3pe7_A Oligogalacturonate lyas 99.8 2.4E-17 8.3E-22 133.1 22.2 219 4-286 16-276 (388)
157 1k32_A Tricorn protease; prote 99.8 1.1E-17 3.7E-22 151.3 22.1 238 11-286 196-464 (1045)
158 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.5E-17 5.1E-22 133.4 19.4 256 18-285 39-343 (365)
159 1pby_B Quinohemoprotein amine 99.8 3.1E-17 1.1E-21 129.8 20.8 232 31-290 2-276 (337)
160 3fvz_A Peptidyl-glycine alpha- 99.8 2E-16 6.7E-21 125.0 23.8 248 18-285 23-324 (329)
161 1z68_A Fibroblast activation p 99.8 1E-17 3.5E-22 146.0 13.6 234 9-285 47-348 (719)
162 4a5s_A Dipeptidyl peptidase 4 99.7 2.5E-16 8.6E-21 137.6 21.3 249 18-287 16-357 (740)
163 3scy_A Hypothetical bacterial 99.7 1E-15 3.6E-20 122.4 21.4 231 28-282 11-290 (361)
164 1q7f_A NHL, brain tumor CG1071 99.7 1.1E-14 3.6E-19 112.7 25.6 241 16-285 27-282 (286)
165 3o4h_A Acylamino-acid-releasin 99.7 2E-16 6.7E-21 134.6 16.5 195 63-287 22-231 (582)
166 3c5m_A Oligogalacturonate lyas 99.7 2.2E-16 7.4E-21 127.8 15.3 256 4-286 16-332 (396)
167 3pe7_A Oligogalacturonate lyas 99.7 1.8E-15 6.3E-20 122.1 19.8 252 10-282 72-381 (388)
168 2dg1_A DRP35, lactonase; beta 99.7 5.6E-14 1.9E-18 111.1 27.4 214 10-288 36-267 (333)
169 2xdw_A Prolyl endopeptidase; a 99.7 7.6E-15 2.6E-19 127.7 23.9 213 16-289 122-374 (710)
170 3e5z_A Putative gluconolactona 99.7 3.5E-14 1.2E-18 110.4 25.2 243 9-286 18-289 (296)
171 1jmx_B Amine dehydrogenase; ox 99.7 1.7E-15 5.7E-20 120.4 17.8 212 9-250 32-334 (349)
172 3dsm_A Uncharacterized protein 99.7 1.8E-13 6E-18 108.0 26.2 238 20-290 45-308 (328)
173 3azo_A Aminopeptidase; POP fam 99.7 1.9E-14 6.5E-19 124.3 22.1 251 11-285 16-327 (662)
174 1qks_A Cytochrome CD1 nitrite 99.7 7.2E-14 2.5E-18 117.4 24.8 207 28-290 165-380 (567)
175 3no2_A Uncharacterized protein 99.7 5.9E-14 2E-18 107.7 21.7 196 29-289 4-201 (276)
176 1rwi_B Serine/threonine-protei 99.6 2.2E-13 7.4E-18 104.3 23.8 239 20-288 25-269 (270)
177 3azo_A Aminopeptidase; POP fam 99.6 1.6E-14 5.5E-19 124.7 18.0 216 10-287 116-373 (662)
178 2bkl_A Prolyl endopeptidase; m 99.6 1.4E-14 4.9E-19 125.6 17.7 249 16-286 118-400 (695)
179 2mad_H Methylamine dehydrogena 99.6 3E-12 1E-16 102.4 29.2 259 9-290 58-357 (373)
180 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.6E-13 5.4E-18 110.0 19.7 197 32-286 4-229 (365)
181 3no2_A Uncharacterized protein 99.6 1.1E-12 3.8E-17 100.6 23.0 199 7-270 24-230 (276)
182 1qks_A Cytochrome CD1 nitrite 99.6 4.9E-12 1.7E-16 106.3 27.9 257 9-290 188-545 (567)
183 3c5m_A Oligogalacturonate lyas 99.6 2.4E-13 8.1E-18 109.9 18.4 233 22-285 84-386 (396)
184 2gop_A Trilobed protease; beta 99.6 7.6E-13 2.6E-17 105.1 19.6 189 19-286 59-294 (347)
185 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 6.4E-12 2.2E-16 98.3 24.1 246 14-284 13-300 (314)
186 2oiz_A Aromatic amine dehydrog 99.5 1.6E-12 5.3E-17 103.9 20.2 119 29-189 14-149 (361)
187 3c75_H MADH, methylamine dehyd 99.5 2.6E-12 8.9E-17 103.6 21.2 257 10-290 111-409 (426)
188 3sjl_D Methylamine dehydrogena 99.5 5.2E-12 1.8E-16 100.2 21.9 262 9-290 70-370 (386)
189 2dg1_A DRP35, lactonase; beta 99.5 1.3E-11 4.6E-16 97.4 24.0 200 16-273 84-300 (333)
190 1yr2_A Prolyl oligopeptidase; 99.5 2E-12 6.7E-17 113.1 20.7 207 17-287 161-398 (741)
191 2xdw_A Prolyl endopeptidase; a 99.5 6.1E-12 2.1E-16 109.5 22.9 205 21-285 173-416 (710)
192 2z2n_A Virginiamycin B lyase; 99.5 6.4E-10 2.2E-14 86.1 29.6 238 13-282 9-254 (299)
193 2gop_A Trilobed protease; beta 99.5 1.6E-11 5.5E-16 97.4 20.6 185 21-285 106-332 (347)
194 3hrp_A Uncharacterized protein 99.4 1.6E-10 5.5E-15 93.7 25.3 209 19-287 131-358 (409)
195 3g4e_A Regucalcin; six bladed 99.4 3.7E-10 1.2E-14 87.7 26.1 209 14-290 8-236 (297)
196 2hz6_A Endoplasmic reticulum t 99.4 7.9E-14 2.7E-18 111.7 5.4 187 29-288 8-197 (369)
197 4a5s_A Dipeptidyl peptidase 4 99.4 1.8E-11 6.3E-16 107.0 19.7 85 8-98 46-144 (740)
198 1mda_H Methylamine dehydrogena 99.4 9.4E-11 3.2E-15 93.0 20.3 256 9-290 57-353 (368)
199 3fvz_A Peptidyl-glycine alpha- 99.4 9E-11 3.1E-15 92.5 19.9 126 154-290 96-234 (329)
200 1xip_A Nucleoporin NUP159; bet 99.4 1.8E-11 6.2E-16 97.4 15.4 170 20-269 39-230 (388)
201 3dsm_A Uncharacterized protein 99.4 1.1E-10 3.7E-15 92.0 19.7 219 37-287 14-257 (328)
202 3iuj_A Prolyl endopeptidase; h 99.4 8.8E-11 3E-15 101.9 20.7 205 16-285 126-361 (693)
203 2z2n_A Virginiamycin B lyase; 99.4 4.6E-09 1.6E-13 81.2 28.3 236 17-286 55-298 (299)
204 2ghs_A AGR_C_1268P; regucalcin 99.4 3.8E-09 1.3E-13 83.1 27.8 198 20-288 50-264 (326)
205 2qc5_A Streptogramin B lactona 99.3 1.4E-08 4.8E-13 78.5 29.2 235 16-282 17-259 (300)
206 3dr2_A Exported gluconolactona 99.3 3.2E-10 1.1E-14 88.4 19.7 236 10-277 36-301 (305)
207 2iwa_A Glutamine cyclotransfer 99.3 1E-09 3.5E-14 82.6 21.3 210 10-284 11-238 (266)
208 1q7f_A NHL, brain tumor CG1071 99.3 5.6E-10 1.9E-14 86.1 20.6 196 17-240 75-280 (286)
209 1xip_A Nucleoporin NUP159; bet 99.3 6.1E-11 2.1E-15 94.4 14.4 149 64-286 39-194 (388)
210 3g4e_A Regucalcin; six bladed 99.3 3.4E-09 1.2E-13 82.2 24.0 191 17-269 52-258 (297)
211 2bkl_A Prolyl endopeptidase; m 99.3 2.3E-10 7.8E-15 99.4 17.6 194 27-285 76-306 (695)
212 1yr2_A Prolyl oligopeptidase; 99.3 1.3E-09 4.4E-14 95.4 22.1 204 21-286 211-444 (741)
213 2qe8_A Uncharacterized protein 99.2 9.6E-10 3.3E-14 87.2 17.8 222 19-286 17-281 (343)
214 3sjl_D Methylamine dehydrogena 99.2 4.1E-09 1.4E-13 83.7 21.1 198 24-285 38-258 (386)
215 2mad_H Methylamine dehydrogena 99.2 1.2E-08 4.1E-13 81.6 24.0 121 25-189 27-165 (373)
216 3e5z_A Putative gluconolactona 99.2 1.3E-09 4.5E-14 84.5 17.7 169 52-286 19-206 (296)
217 3hrp_A Uncharacterized protein 99.2 5.7E-09 2E-13 84.6 21.8 207 24-282 176-409 (409)
218 3nol_A Glutamine cyclotransfer 99.2 8.5E-09 2.9E-13 76.8 20.3 194 11-272 34-244 (262)
219 2qc5_A Streptogramin B lactona 99.2 7.3E-08 2.5E-12 74.5 26.8 232 17-282 60-299 (300)
220 2ghs_A AGR_C_1268P; regucalcin 99.2 3.1E-08 1.1E-12 77.9 23.5 187 18-270 89-289 (326)
221 2ece_A 462AA long hypothetical 99.2 1.3E-08 4.5E-13 81.6 20.7 219 4-271 116-399 (462)
222 3nok_A Glutaminyl cyclase; bet 99.1 2.4E-08 8.3E-13 74.4 18.1 194 10-271 45-253 (268)
223 3mbr_X Glutamine cyclotransfer 99.1 1.3E-07 4.3E-12 69.9 21.7 197 9-272 10-223 (243)
224 3c75_H MADH, methylamine dehyd 99.1 2E-08 6.7E-13 81.2 18.6 194 28-285 82-297 (426)
225 3q7m_A Lipoprotein YFGL, BAMB; 99.1 8.1E-08 2.8E-12 77.0 22.4 226 29-288 102-342 (376)
226 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 6E-08 2.1E-12 75.6 19.9 199 64-288 19-261 (314)
227 1rwi_B Serine/threonine-protei 99.0 2.3E-08 7.9E-13 76.2 17.1 197 64-286 25-225 (270)
228 2hz6_A Endoplasmic reticulum t 99.0 8.6E-11 3E-15 94.0 2.9 187 7-265 28-216 (369)
229 1kb0_A Quinohemoprotein alcoho 99.0 2.6E-08 8.9E-13 86.0 17.3 58 231-290 457-514 (677)
230 1fwx_A Nitrous oxide reductase 99.0 3.8E-08 1.3E-12 81.7 17.3 223 29-283 100-361 (595)
231 2ece_A 462AA long hypothetical 99.0 6.9E-08 2.4E-12 77.5 17.7 198 28-283 93-352 (462)
232 3iuj_A Prolyl endopeptidase; h 99.0 7.7E-08 2.6E-12 83.5 19.6 200 22-286 178-408 (693)
233 1npe_A Nidogen, entactin; glyc 99.0 3.5E-06 1.2E-10 64.0 26.2 207 19-290 36-245 (267)
234 3nok_A Glutaminyl cyclase; bet 98.9 4.2E-07 1.5E-11 67.7 19.7 169 51-290 44-217 (268)
235 2qe8_A Uncharacterized protein 98.9 1.5E-07 5E-12 74.6 18.6 228 16-276 64-314 (343)
236 1yiq_A Quinohemoprotein alcoho 98.9 1.6E-07 5.5E-12 81.2 19.4 58 230-289 454-511 (689)
237 2iwa_A Glutamine cyclotransfer 98.9 6.2E-07 2.1E-11 67.5 19.4 172 51-290 10-188 (266)
238 3mbr_X Glutamine cyclotransfer 98.9 9.6E-07 3.3E-11 65.2 19.5 170 51-290 10-186 (243)
239 1fwx_A Nitrous oxide reductase 98.9 1.8E-07 6.1E-12 77.8 17.1 222 19-286 134-434 (595)
240 3q7m_A Lipoprotein YFGL, BAMB; 98.9 4.5E-06 1.5E-10 66.8 24.9 235 29-288 52-301 (376)
241 3nol_A Glutamine cyclotransfer 98.9 8.3E-07 2.8E-11 66.1 18.6 169 52-290 33-208 (262)
242 1kb0_A Quinohemoprotein alcoho 98.8 8.4E-07 2.9E-11 76.6 20.2 229 22-283 246-567 (677)
243 1mda_H Methylamine dehydrogena 98.8 2.5E-07 8.7E-12 73.4 15.5 54 41-100 47-110 (368)
244 3qqz_A Putative uncharacterize 98.8 1.3E-05 4.4E-10 60.0 23.7 222 13-283 21-253 (255)
245 2fp8_A Strictosidine synthase; 98.8 7.3E-06 2.5E-10 64.2 23.3 214 14-288 14-273 (322)
246 3hxj_A Pyrrolo-quinoline quino 98.7 1.3E-06 4.3E-11 68.5 17.0 218 30-286 107-327 (330)
247 1yiq_A Quinohemoprotein alcoho 98.7 2.8E-06 9.6E-11 73.6 19.6 208 30-287 70-342 (689)
248 3hxj_A Pyrrolo-quinoline quino 98.7 3E-07 1E-11 72.1 12.4 232 9-283 10-244 (330)
249 3dr2_A Exported gluconolactona 98.6 4.2E-06 1.4E-10 65.0 17.3 157 64-285 46-226 (305)
250 3v65_B Low-density lipoprotein 98.6 9.7E-05 3.3E-09 59.3 25.6 208 19-290 116-325 (386)
251 2p4o_A Hypothetical protein; p 98.6 9.1E-05 3.1E-09 57.4 26.2 230 11-272 25-277 (306)
252 2xe4_A Oligopeptidase B; hydro 98.6 4.4E-06 1.5E-10 73.2 18.4 198 20-281 175-398 (751)
253 1npe_A Nidogen, entactin; glyc 98.5 0.00016 5.5E-09 54.8 23.3 189 31-285 2-200 (267)
254 1kv9_A Type II quinohemoprotei 98.5 5.4E-05 1.8E-09 65.4 21.6 76 22-99 233-337 (668)
255 1kv9_A Type II quinohemoprotei 98.5 2.2E-05 7.5E-10 67.8 19.0 207 30-287 66-337 (668)
256 2ad6_A Methanol dehydrogenase 98.5 2.5E-05 8.5E-10 66.1 19.0 59 229-289 442-500 (571)
257 3v64_C Agrin; beta propeller, 98.4 0.00034 1.2E-08 55.3 26.9 244 19-289 34-281 (349)
258 3amr_A 3-phytase; beta-propell 98.4 0.00033 1.1E-08 54.6 21.8 199 30-289 40-270 (355)
259 1w6s_A Methanol dehydrogenase 98.3 0.00017 5.9E-09 61.2 19.9 59 229-289 451-509 (599)
260 3sov_A LRP-6, low-density lipo 98.2 0.0009 3.1E-08 52.1 23.9 207 19-289 35-244 (318)
261 1flg_A Protein (quinoprotein e 98.2 0.00016 5.3E-09 61.4 17.9 59 229-289 464-522 (582)
262 4a2l_A BT_4663, two-component 98.2 0.0019 6.6E-08 57.1 25.4 242 21-287 175-440 (795)
263 1flg_A Protein (quinoprotein e 98.2 0.00036 1.2E-08 59.2 19.9 78 171-267 465-543 (582)
264 1w6s_A Methanol dehydrogenase 98.2 0.00097 3.3E-08 56.6 21.8 211 30-288 62-347 (599)
265 1k3i_A Galactose oxidase precu 98.1 0.00032 1.1E-08 60.5 19.0 73 23-98 190-277 (656)
266 2fp8_A Strictosidine synthase; 98.1 0.00098 3.3E-08 52.0 20.2 109 154-284 190-314 (322)
267 3tc9_A Hypothetical hydrolase; 98.1 0.0015 5.1E-08 53.2 21.7 202 20-285 138-372 (430)
268 1ijq_A LDL receptor, low-densi 98.1 0.0016 5.5E-08 50.7 26.8 207 18-289 29-244 (316)
269 3p5b_L Low density lipoprotein 98.1 0.0023 8E-08 51.6 26.9 209 18-290 111-327 (400)
270 1n7d_A LDL receptor, low-densi 98.1 0.0002 6.8E-09 62.2 16.0 227 39-290 385-621 (699)
271 2ad6_A Methanol dehydrogenase 98.0 0.00094 3.2E-08 56.5 19.3 209 30-289 62-341 (571)
272 3v65_B Low-density lipoprotein 98.0 0.0039 1.3E-07 50.0 23.6 197 21-284 79-278 (386)
273 3ei3_A DNA damage-binding prot 98.0 0.0099 3.4E-07 54.6 25.9 76 18-94 553-635 (1158)
274 2xe4_A Oligopeptidase B; hydro 98.0 0.0011 3.9E-08 58.0 19.1 158 64-283 175-354 (751)
275 3v64_C Agrin; beta propeller, 97.9 0.0048 1.7E-07 48.7 25.1 203 20-248 74-282 (349)
276 3kya_A Putative phosphatase; s 97.9 0.0068 2.3E-07 49.9 22.8 209 20-285 140-411 (496)
277 4a2l_A BT_4663, two-component 97.9 0.011 3.8E-07 52.2 27.6 246 18-287 214-484 (795)
278 4hw6_A Hypothetical protein, I 97.9 0.0067 2.3E-07 49.4 24.8 202 20-285 140-375 (433)
279 3m0c_C LDL receptor, low-densi 97.9 0.011 3.8E-07 51.9 27.0 208 18-289 423-638 (791)
280 3tc9_A Hypothetical hydrolase; 97.9 0.0032 1.1E-07 51.3 18.8 216 12-282 172-429 (430)
281 4a0p_A LRP6, LRP-6, low-densit 97.8 0.013 4.3E-07 50.3 25.3 203 19-287 37-241 (628)
282 3v9f_A Two-component system se 97.8 0.018 6.2E-07 50.8 25.7 241 18-286 257-527 (781)
283 4hw6_A Hypothetical protein, I 97.7 0.0083 2.8E-07 48.9 19.6 218 12-282 175-432 (433)
284 3m0c_C LDL receptor, low-densi 97.7 0.019 6.6E-07 50.4 23.4 201 22-285 388-591 (791)
285 2p9w_A MAL S 1 allergenic prot 97.7 0.01 3.5E-07 45.9 22.5 214 13-283 7-265 (334)
286 3v9f_A Two-component system se 97.7 0.025 8.4E-07 49.9 23.5 243 18-286 312-571 (781)
287 1n7d_A LDL receptor, low-densi 97.7 0.0011 3.9E-08 57.5 14.1 218 19-260 406-633 (699)
288 3s94_A LRP-6, low-density lipo 97.6 0.026 9E-07 48.3 23.3 207 19-289 40-249 (619)
289 3p5b_L Low density lipoprotein 97.6 0.019 6.5E-07 46.2 24.0 191 32-284 85-278 (400)
290 2xzh_A Clathrin heavy chain 1; 97.6 0.015 5.2E-07 44.8 26.4 247 25-287 73-336 (365)
291 1ijq_A LDL receptor, low-densi 97.6 0.017 5.9E-07 44.8 23.3 189 32-283 3-195 (316)
292 2p9w_A MAL S 1 allergenic prot 97.5 0.0077 2.6E-07 46.6 15.2 101 171-284 99-216 (334)
293 1k3i_A Galactose oxidase precu 97.5 0.0065 2.2E-07 52.4 16.7 74 22-98 246-326 (656)
294 3amr_A 3-phytase; beta-propell 97.4 0.022 7.5E-07 44.5 16.6 110 163-282 88-209 (355)
295 3sov_A LRP-6, low-density lipo 97.4 0.029 9.8E-07 43.6 22.5 181 39-284 12-198 (318)
296 3kya_A Putative phosphatase; s 97.3 0.06 2.1E-06 44.4 21.1 224 20-287 187-479 (496)
297 2p4o_A Hypothetical protein; p 97.1 0.066 2.2E-06 41.2 20.6 165 50-283 22-198 (306)
298 1bpo_A Protein (clathrin); cla 97.0 0.091 3.1E-06 42.3 26.5 248 24-287 71-335 (494)
299 3qqz_A Putative uncharacterize 96.9 0.074 2.5E-06 39.7 19.1 166 64-284 28-205 (255)
300 2xzh_A Clathrin heavy chain 1; 96.9 0.099 3.4E-06 40.4 21.6 222 38-289 47-296 (365)
301 2be1_A Serine/threonine-protei 96.9 0.0089 3.1E-07 46.7 9.9 66 31-97 11-78 (339)
302 3pbp_A Nucleoporin NUP82; beta 96.9 0.041 1.4E-06 44.1 13.5 113 154-278 71-207 (452)
303 1bpo_A Protein (clathrin); cla 96.8 0.15 5.1E-06 41.1 21.5 222 38-289 46-295 (494)
304 2vpj_A Kelch-like protein 12; 96.8 0.12 4E-06 39.6 17.4 61 223-286 209-281 (301)
305 2xn4_A Kelch-like protein 2; s 96.7 0.12 4.2E-06 39.5 17.7 65 29-97 61-135 (302)
306 3ii7_A Kelch-like protein 7; p 96.7 0.13 4.3E-06 39.5 17.7 65 29-97 55-129 (306)
307 2xbg_A YCF48-like protein; pho 96.5 0.2 6.8E-06 39.0 22.2 108 154-281 210-320 (327)
308 3sre_A PON1, serum paraoxonase 96.2 0.35 1.2E-05 38.1 16.3 49 231-283 203-252 (355)
309 4a0p_A LRP6, LRP-6, low-densit 96.1 0.58 2E-05 40.1 25.4 206 19-287 340-553 (628)
310 3pbp_A Nucleoporin NUP82; beta 96.0 0.36 1.2E-05 38.8 14.1 76 20-96 67-159 (452)
311 3sre_A PON1, serum paraoxonase 96.0 0.43 1.5E-05 37.6 20.3 63 206-273 222-287 (355)
312 3s94_A LRP-6, low-density lipo 96.0 0.67 2.3E-05 39.7 24.3 202 20-284 350-552 (619)
313 1xi4_A Clathrin heavy chain; a 96.0 1.1 3.7E-05 42.2 18.4 246 26-287 73-335 (1630)
314 2vpj_A Kelch-like protein 12; 95.9 0.4 1.4E-05 36.5 19.0 65 29-97 14-89 (301)
315 1zgk_A Kelch-like ECH-associat 95.8 0.44 1.5E-05 36.6 16.7 61 223-286 218-290 (308)
316 1xi4_A Clathrin heavy chain; a 95.6 0.55 1.9E-05 44.0 15.3 220 39-288 47-294 (1630)
317 2xn4_A Kelch-like protein 2; s 95.6 0.53 1.8E-05 35.9 17.0 53 231-286 173-232 (302)
318 2uvk_A YJHT; unknown function, 95.2 0.81 2.8E-05 35.9 13.9 55 232-289 286-348 (357)
319 1zgk_A Kelch-like ECH-associat 95.2 0.78 2.7E-05 35.2 16.9 61 223-286 171-243 (308)
320 2ism_A Putative oxidoreductase 95.0 1 3.4E-05 35.5 24.9 73 18-95 30-114 (352)
321 3ei3_A DNA damage-binding prot 94.9 2.3 7.9E-05 39.4 26.7 74 20-97 515-593 (1158)
322 4asc_A Kelch repeat and BTB do 94.9 0.98 3.3E-05 34.7 18.1 66 28-97 44-128 (315)
323 1cru_A Protein (soluble quinop 94.7 1.5 5.1E-05 35.9 15.9 30 65-96 29-58 (454)
324 3ii7_A Kelch-like protein 7; p 94.3 1.3 4.4E-05 33.8 17.0 62 32-97 14-81 (306)
325 3ott_A Two-component system se 94.0 3 0.0001 36.6 20.4 199 19-286 63-263 (758)
326 3das_A Putative oxidoreductase 93.9 1.8 6.3E-05 33.9 16.9 31 64-96 33-63 (347)
327 2g8s_A Glucose/sorbosone dehyd 93.8 1.9 6.6E-05 33.8 17.7 28 65-94 20-47 (353)
328 2woz_A Kelch repeat and BTB do 93.7 1.8 6.1E-05 33.2 18.1 67 28-98 55-139 (318)
329 2be1_A Serine/threonine-protei 93.7 0.39 1.3E-05 37.5 8.5 108 167-289 15-136 (339)
330 3a9g_A Putative uncharacterize 93.3 2.4 8.2E-05 33.3 26.2 74 18-95 28-114 (354)
331 1tl2_A L10, protein (tachylect 92.8 0.64 2.2E-05 33.8 7.7 108 154-279 46-159 (236)
332 4asc_A Kelch repeat and BTB do 92.7 2.6 8.9E-05 32.3 19.2 61 32-98 7-79 (315)
333 4gq2_M Nucleoporin NUP120; bet 92.7 3.5 0.00012 37.3 14.1 38 20-57 237-274 (950)
334 2ism_A Putative oxidoreductase 92.5 3.2 0.00011 32.6 19.0 51 220-271 278-333 (352)
335 4gq2_M Nucleoporin NUP120; bet 91.2 2.4 8.4E-05 38.3 11.4 36 254-289 237-272 (950)
336 2xbg_A YCF48-like protein; pho 91.0 4.4 0.00015 31.3 23.9 67 18-90 35-103 (327)
337 1cru_A Protein (soluble quinop 90.5 6.3 0.00021 32.2 28.1 71 11-83 19-98 (454)
338 2zwa_A Leucine carboxyl methyl 90.2 8.8 0.0003 33.4 18.7 55 231-286 568-638 (695)
339 2woz_A Kelch repeat and BTB do 89.8 5.5 0.00019 30.5 18.5 60 32-97 18-89 (318)
340 3sbq_A Nitrous-oxide reductase 89.5 2.1 7.1E-05 35.9 8.5 107 154-271 328-453 (638)
341 2g8s_A Glucose/sorbosone dehyd 89.3 6.7 0.00023 30.8 25.0 68 11-82 10-86 (353)
342 3sbq_A Nitrous-oxide reductase 89.1 2.9 9.9E-05 35.1 9.1 68 213-284 330-409 (638)
343 3a9g_A Putative uncharacterize 88.9 7.2 0.00025 30.6 21.5 51 220-271 277-330 (354)
344 2zwa_A Leucine carboxyl methyl 88.2 12 0.00042 32.5 15.2 67 29-98 451-525 (695)
345 4fhn_B Nucleoporin NUP120; pro 87.4 2.5 8.5E-05 39.2 8.7 36 254-289 239-274 (1139)
346 3das_A Putative oxidoreductase 86.2 11 0.00036 29.6 26.8 81 13-95 26-116 (347)
347 1tl2_A L10, protein (tachylect 83.6 2.9 0.0001 30.4 5.8 69 19-94 41-115 (236)
348 2wg3_C Hedgehog-interacting pr 82.5 13 0.00043 30.6 10.0 114 154-273 19-159 (463)
349 4fhn_B Nucleoporin NUP120; pro 82.5 1.7 5.8E-05 40.2 5.3 39 20-58 239-277 (1139)
350 4gz8_A Semaphorin-3A; multi-do 80.5 12 0.0004 32.3 9.3 80 9-90 402-495 (667)
351 3f7f_A Nucleoporin NUP120; nuc 80.4 4.2 0.00014 35.3 6.5 38 19-58 222-259 (729)
352 3zwu_A Alkaline phosphatase PH 78.7 13 0.00046 31.5 9.0 58 22-82 479-548 (592)
353 1q47_A Semaphorin 3A; beta pro 78.5 10 0.00036 31.4 8.2 80 9-90 394-487 (495)
354 3al9_A Plexin-A2; beta-propell 77.9 6.4 0.00022 33.0 6.8 69 20-90 401-476 (539)
355 3f7f_A Nucleoporin NUP120; nuc 77.6 3.8 0.00013 35.5 5.5 34 254-289 223-256 (729)
356 2wg3_C Hedgehog-interacting pr 76.1 31 0.0011 28.3 11.9 53 20-72 15-78 (463)
357 3ol2_B Plexin-B1; beta-propell 73.8 9.1 0.00031 31.9 6.6 68 20-90 388-461 (528)
358 2uvk_A YJHT; unknown function, 70.9 34 0.0012 26.4 12.9 21 161-181 20-40 (357)
359 4a9v_A PHOX; hydrolase, beta-p 69.9 41 0.0014 28.5 9.5 62 19-83 476-549 (592)
360 3oky_A Plexin-A2; transmembran 66.2 27 0.00091 30.3 8.0 69 20-90 400-475 (681)
361 3oky_B Putative uncharacterize 61.0 45 0.0015 28.2 8.2 81 8-90 392-495 (565)
362 4hvt_A Ritya.17583.B, post-pro 61.0 85 0.0029 27.4 16.8 56 229-285 318-383 (711)
363 3ott_A Two-component system se 60.2 88 0.003 27.4 23.4 71 20-97 192-262 (758)
364 3qhy_B Beta-lactamase inhibito 57.6 58 0.002 24.4 19.9 55 223-283 192-246 (282)
365 1q47_A Semaphorin 3A; beta pro 51.3 64 0.0022 26.8 7.6 57 222-278 422-487 (495)
366 3qhy_B Beta-lactamase inhibito 50.4 77 0.0026 23.7 18.7 69 20-98 25-93 (282)
367 3q6k_A 43.2 kDa salivary prote 48.4 1E+02 0.0035 24.5 14.6 118 163-283 172-306 (381)
368 3nvq_A Semaphorin-7A; beta-pro 45.2 84 0.0029 26.8 7.5 58 31-90 381-444 (590)
369 3s25_A Hypothetical 7-bladed b 45.1 99 0.0034 23.5 21.4 213 28-283 23-255 (302)
370 3s25_A Hypothetical 7-bladed b 41.2 1.2E+02 0.0039 23.1 16.9 51 229-285 127-178 (302)
371 4a9v_A PHOX; hydrolase, beta-p 40.5 1.3E+02 0.0044 25.6 7.8 38 232-270 510-548 (592)
372 1olz_A Semaphorin 4D; developm 38.5 89 0.003 27.1 6.8 57 222-278 416-477 (663)
373 3q6k_A 43.2 kDa salivary prote 38.4 1.5E+02 0.0051 23.6 16.1 80 19-98 87-193 (381)
374 3zwu_A Alkaline phosphatase PH 36.7 1.5E+02 0.005 25.3 7.7 38 232-270 510-548 (592)
375 3al9_A Plexin-A2; beta-propell 35.7 79 0.0027 26.5 6.0 58 221-278 413-476 (539)
376 3nvq_A Semaphorin-7A; beta-pro 35.7 1.4E+02 0.0048 25.4 7.4 58 222-279 381-445 (590)
377 4gz8_A Semaphorin-3A; multi-do 33.7 1.5E+02 0.0052 25.7 7.5 56 223-278 431-495 (667)
378 4fww_A Macrophage-stimulating 32.4 54 0.0018 27.4 4.5 71 17-90 403-479 (527)
379 1olz_A Semaphorin 4D; developm 29.9 2.3E+02 0.008 24.5 8.0 69 20-90 398-477 (663)
380 3ol2_B Plexin-B1; beta-propell 24.2 2.1E+02 0.0072 24.0 6.5 59 220-278 399-461 (528)
381 3oky_B Putative uncharacterize 22.9 2.7E+02 0.0092 23.6 6.9 59 221-279 420-496 (565)
382 1ukf_A Avirulence protein AVRP 22.7 83 0.0028 22.0 3.2 34 254-287 120-154 (188)
383 3oky_A Plexin-A2; transmembran 20.2 2.9E+02 0.01 24.1 6.8 58 221-278 412-475 (681)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.4e-42 Score=272.21 Aligned_cols=259 Identities=15% Similarity=0.206 Sum_probs=211.0
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeE
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i 88 (291)
+..++|.+|.+.|++++|+|++++|++|+.||+|++||+++++.+..+..|... |.+++|+| ++++|++|+.|++|
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~--v~~~~~~~--~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETP--VRAGKFIA--RKNWIIVGSDDFRI 79 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC--EEEEEEEG--GGTEEEEEETTSEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCc--EEEEEEeC--CCCEEEEECCCCEE
Confidence 567899999999999999999999999999999999999999999999988855 99999999 99999999999999
Q ss_pred EEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCcEE
Q 022870 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYM 164 (291)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 164 (291)
++||+++++... .+..+........+.+... ........+...+|++.........+.+|.. ++|+|.+..++
T Consensus 80 ~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 156 (304)
T 2ynn_A 80 RVFNYNTGEKVV--DFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (304)
T ss_dssp EEEETTTCCEEE--EEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEE
T ss_pred EEEECCCCcEEE--EEeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEE
Confidence 999999886543 2333344445555544432 2334455677888998877666666777766 89999665555
Q ss_pred EEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCc
Q 022870 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (291)
Q Consensus 165 ~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (291)
+ +|+.|+.|++||+++......+.. +| ...+..+. |+|.. ++. +|++|+.|+.|++||+++ +++
T Consensus 157 ~-sgs~D~~v~iwd~~~~~~~~~~~~-------~~----~~~v~~~~-~~~~~-~~~-~l~s~s~D~~i~iWd~~~-~~~ 220 (304)
T 2ynn_A 157 A-SGCLDRTVKVWSLGQSTPNFTLTT-------GQ----ERGVNYVD-YYPLP-DKP-YMITASDDLTIKIWDYQT-KSC 220 (304)
T ss_dssp E-EEETTSEEEEEETTCSSCSEEEEC-------CC----TTCEEEEE-ECCST-TCC-EEEEEETTSEEEEEETTT-TEE
T ss_pred E-EEeCCCeEEEEECCCCCccceecc-------CC----cCcEEEEE-EEEcC-CCC-EEEEEcCCCeEEEEeCCC-Ccc
Confidence 5 677799999999998877666652 23 22345555 87752 244 899999999999999998 889
Q ss_pred eeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 245 LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 245 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+..+.+|...|.+++|+|++.+|++|+.||.|++||++++++++++
T Consensus 221 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~ 266 (304)
T 2ynn_A 221 VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeec
Confidence 9999999999999999999999999999999999999999887764
No 2
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.6e-40 Score=268.40 Aligned_cols=265 Identities=14% Similarity=0.254 Sum_probs=196.4
Q ss_pred CCCCCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeC
Q 022870 5 PPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (291)
Q Consensus 5 ~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (291)
|....+.++|++|.++|++++|+|++++|++|+.||+|+|||+.+++....+..|... |.+++|+| ++++|++|+.
T Consensus 53 ~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~--v~~~~~s~--~g~~las~~~ 128 (380)
T 3iz6_a 53 PTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPW--VMECAFAP--NGQSVACGGL 128 (380)
T ss_dssp CCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTT--CCCCEECT--TSSEEEECCS
T ss_pred cceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCC--EEEEEECC--CCCEEEEeeC
Confidence 4445677899999999999999999999999999999999999999999999988855 99999999 8899999999
Q ss_pred CCeEEEEECCCCCCCC-----C----------------C-----cccc---------------------------ccceE
Q 022870 85 DGTVKCWDIENGGLSS-----N----------------P-----SLTI---------------------------KTNSY 111 (291)
Q Consensus 85 dg~i~iwd~~~~~~~~-----~----------------~-----~~~~---------------------------~~~~~ 111 (291)
|+.+++||+.+..... . + +... +....
T Consensus 129 d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v 208 (380)
T 3iz6_a 129 DSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADV 208 (380)
T ss_dssp SSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCE
T ss_pred CCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCe
Confidence 9999999876421100 0 0 0000 00000
Q ss_pred EEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeE
Q 022870 112 HFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTR 187 (291)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~ 187 (291)
....+..............+...+|+++........+.+|.. ++|+|++..++ +|+.|++|++||+++++++..
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~--s~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFG--TGSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEE--EECSSSCEEEEETTTTEEEEE
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEE--EEcCCCeEEEEECCCCcEEEE
Confidence 000111111111223334556777887755445555666765 89999997654 778899999999999998887
Q ss_pred ecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeec----cccccceeEEEeecC
Q 022870 188 LHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM----KVHLEPVLCLSIDES 263 (291)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~----~~h~~~v~~~~~~~~ 263 (291)
+.... .........+.+++ |+|+ |+ +|++|+.||.|++||+.+ ++.+..+ .+|.+.|++++|+|+
T Consensus 287 ~~~~~-----~~~~~~~~~v~~~~-~s~~---g~-~l~~g~~dg~i~vwd~~~-~~~~~~~~~~~~~h~~~v~~l~~s~d 355 (380)
T 3iz6_a 287 YNREP-----DRNDNELPIVTSVA-FSIS---GR-LLFAGYSNGDCYVWDTLL-AEMVLNLGTLQNSHEGRISCLGLSSD 355 (380)
T ss_dssp ECCCC-----SSSCCSSCSCSEEE-ECSS---SS-EEEEECTTSCEEEEETTT-CCEEEEECCSCSSCCCCCCEEEECSS
T ss_pred ecccc-----cccccccCceEEEE-ECCC---CC-EEEEEECCCCEEEEECCC-CceEEEEecccCCCCCceEEEEECCC
Confidence 76311 11111233467776 9998 44 999999999999999987 6666655 689999999999999
Q ss_pred CCeeEEecCCCeEEEEEcCCCce
Q 022870 264 CNGGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 264 ~~~l~s~s~dg~i~vw~~~~~~~ 286 (291)
+.+|++||.||.|++|++...+.
T Consensus 356 g~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 356 GSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp SSEEEEECTTSCEEEEECCSSSS
T ss_pred CCEEEEeeCCCCEEEEecCCCcc
Confidence 99999999999999999987653
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-40 Score=271.46 Aligned_cols=256 Identities=16% Similarity=0.239 Sum_probs=206.9
Q ss_pred ceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEE
Q 022870 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (291)
Q Consensus 10 ~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~ 89 (291)
....+.+|.++|++++|+|++.+|++|+.||+|++||+.+++....+.+|... |.+++|+| ++.+|++|+.|++|+
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~--V~~v~~~~--~~~~l~sgs~D~~i~ 175 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS--VQDISFDH--SGKLLASCSADMTIK 175 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSC--EEEEEECT--TSSEEEEEETTSCCC
T ss_pred ceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCc--EEEEEEcC--CCCEEEEEeCCCeEE
Confidence 35678999999999999999999999999999999999999999999999855 99999999 999999999999999
Q ss_pred EEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCcEEE
Q 022870 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYMA 165 (291)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 165 (291)
+||+.+.+... .+..+........+.+... ........+...+|++....... .+.+|.. ++++|++..++
T Consensus 176 iwd~~~~~~~~--~~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~~~~~~-~~~~h~~~v~~~~~~~~g~~l~- 250 (410)
T 1vyh_C 176 LWDFQGFECIR--TMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGYCVK-TFTGHREWVRMVRPNQDGTLIA- 250 (410)
T ss_dssp EEETTSSCEEE--CCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEE-EEECCSSCEEEEEECTTSSEEE-
T ss_pred EEeCCCCceeE--EEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcEEE-EEeCCCccEEEEEECCCCCEEE-
Confidence 99998876543 2223333444444444332 22334455667888887765433 3445555 78999987544
Q ss_pred EecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCC-----------------CCceEEEeec
Q 022870 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS-----------------QGFVNVLAGY 228 (291)
Q Consensus 166 ~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-----------------~g~~~l~~g~ 228 (291)
+|+.|+.|++||++++++...+. +|. ..+.++. |+|+.. .|. +|++|+
T Consensus 251 -s~s~D~~v~vwd~~~~~~~~~~~--------~h~----~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs 315 (410)
T 1vyh_C 251 -SCSNDQTVRVWVVATKECKAELR--------EHR----HVVECIS-WAPESSYSSISEATGSETKKSGKPGP-FLLSGS 315 (410)
T ss_dssp -EEETTSCEEEEETTTCCEEEEEC--------CCS----SCEEEEE-ECCSCGGGGGGGCCSCC-------CC-EEEEEE
T ss_pred -EEcCCCeEEEEECCCCceeeEec--------CCC----ceEEEEE-EcCcccccchhhhccccccccCCCCC-EEEEEe
Confidence 66779999999999999888887 563 4567776 998632 144 899999
Q ss_pred CCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 229 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 229 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
.||.|++||+++ +.++..+.+|...|++++|+|++++|++|+.||.|++||++++++++++
T Consensus 316 ~D~~i~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~ 376 (410)
T 1vyh_C 316 RDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376 (410)
T ss_dssp TTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE
T ss_pred CCCeEEEEECCC-CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 999999999998 8899999999999999999999999999999999999999998876653
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=264.34 Aligned_cols=245 Identities=14% Similarity=0.129 Sum_probs=187.8
Q ss_pred CCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEE----eeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEE
Q 022870 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSS----WVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iw 91 (291)
.|...|++++|+|++ .|++|+.||+|+|||+++++.+..+ .+|. ..|.+++|+| ++++|++|+.|++|++|
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~--~~V~~v~~sp--dg~~l~sgs~d~~i~iw 154 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHD--DIVSTVSVLS--SGTQAVSGSKDICIKVW 154 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCS--SCEEEEEECT--TSSEEEEEETTSCEEEE
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCC--CCEEEEEECC--CCCEEEEEeCCCeEEEE
Confidence 366789999999986 7889999999999999988754433 3566 4599999999 99999999999999999
Q ss_pred ECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccC-CCCCC----cccCCCCCcEEEE
Q 022870 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDS-LCDSK----DDVPAEGPKYMAV 166 (291)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~ 166 (291)
|+++++... .+..+........+..............+...+|+++..+...... ..+.. ++|+|++..+++
T Consensus 155 d~~~~~~~~--~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~- 231 (344)
T 4gqb_B 155 DLAQQVVLS--SYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFV- 231 (344)
T ss_dssp ETTTTEEEE--EECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEE-
T ss_pred ECCCCcEEE--EEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceE-
Confidence 999887643 2333444555555555544444455566778889988776544332 22222 889998877776
Q ss_pred ecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCcee
Q 022870 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (291)
Q Consensus 167 ~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~ 246 (291)
+|+.||.|++||+++++++..+. +|. ..+.+++ |+|+ +..+|++|+.|+.|+|||+++ ++ +.
T Consensus 232 sg~~dg~v~~wd~~~~~~~~~~~--------~h~----~~v~~v~-fsp~---g~~~lasgs~D~~i~vwd~~~-~~-~~ 293 (344)
T 4gqb_B 232 FGDENGTVSLVDTKSTSCVLSSA--------VHS----QCVTGLV-FSPH---SVPFLASLSEDCSLAVLDSSL-SE-LF 293 (344)
T ss_dssp EEETTSEEEEEESCC--CCEEEE--------CCS----SCEEEEE-ECSS---SSCCEEEEETTSCEEEECTTC-CE-EE
T ss_pred EeccCCcEEEEECCCCcEEEEEc--------CCC----CCEEEEE-EccC---CCeEEEEEeCCCeEEEEECCC-Cc-EE
Confidence 57779999999999999999988 674 4577787 9998 333899999999999999987 54 45
Q ss_pred eccccccceeEEEeecCCC-eeEEecCCCeEEEEEcCCCce
Q 022870 247 AMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 247 ~~~~h~~~v~~~~~~~~~~-~l~s~s~dg~i~vw~~~~~~~ 286 (291)
.+.+|.+.|++++|+|++. +|+++|.||+|++|++.+..+
T Consensus 294 ~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 294 RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 6789999999999999886 567999999999999987654
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.8e-39 Score=257.41 Aligned_cols=257 Identities=16% Similarity=0.229 Sum_probs=202.0
Q ss_pred CCCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC
Q 022870 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (291)
Q Consensus 7 ~~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (291)
+.+...++++|.++|++++|+|++++|++|+.||+|++||+.+++.+..+..|... |.+++|+| ++++|++|+.|+
T Consensus 44 ~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~--v~~~~~s~--~~~~l~s~~~d~ 119 (340)
T 1got_B 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSW--VMTCAYAP--SGNYVACGGLDN 119 (340)
T ss_dssp CCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSC--EEEEEECT--TSSEEEEEETTC
T ss_pred cchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCcc--EEEEEECC--CCCEEEEEeCCC
Confidence 34567889999999999999999999999999999999999999999999888855 99999999 999999999999
Q ss_pred eEEEEECCCCCCCCCCccc--cccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCCC
Q 022870 87 TVKCWDIENGGLSSNPSLT--IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEG 160 (291)
Q Consensus 87 ~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 160 (291)
.|++||+.+.......... .+......+.+... .........+...+|++...... ..+.+|.. ++|+|++
T Consensus 120 ~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~l~s~s~d~~i~~wd~~~~~~~-~~~~~h~~~v~~~~~~~~~ 196 (340)
T 1got_B 120 ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD--NQIVTSSGDTTCALWDIETGQQT-TTFTGHTGDVMSLSLAPDT 196 (340)
T ss_dssp EEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET--TEEEEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECTTS
T ss_pred eEEEEECccCCCcceeEEEecCCCccEEEEEECCC--CcEEEEECCCcEEEEECCCCcEE-EEEcCCCCceEEEEECCCC
Confidence 9999999876432111111 22233333333322 22334455667788888776543 34456655 8999998
Q ss_pred CcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccC
Q 022870 161 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (291)
Q Consensus 161 ~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~ 240 (291)
..++ +|+.|+.|++||++++++...+. +|. ..+.++. |+|+ +. +|++|+.||.|++||+++
T Consensus 197 ~~l~--sg~~d~~v~~wd~~~~~~~~~~~--------~h~----~~v~~v~-~~p~---~~-~l~s~s~d~~v~iwd~~~ 257 (340)
T 1got_B 197 RLFV--SGACDASAKLWDVREGMCRQTFT--------GHE----SDINAIC-FFPN---GN-AFATGSDDATCRLFDLRA 257 (340)
T ss_dssp SEEE--EEETTSCEEEEETTTCSEEEEEC--------CCS----SCEEEEE-ECTT---SS-EEEEEETTSCEEEEETTT
T ss_pred CEEE--EEeCCCcEEEEECCCCeeEEEEc--------CCc----CCEEEEE-EcCC---CC-EEEEEcCCCcEEEEECCC
Confidence 7544 67779999999999999988887 663 4577776 9998 44 999999999999999998
Q ss_pred CCCceeecc--ccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 241 PGIPLTAMK--VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 241 ~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
.+.+..+. .+...|++++|+|++++|++|+.||.|++||+.+++.+..+
T Consensus 258 -~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~ 308 (340)
T 1got_B 258 -DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVL 308 (340)
T ss_dssp -TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred -CcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEe
Confidence 66665554 23357999999999999999999999999999988776543
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=257.15 Aligned_cols=253 Identities=16% Similarity=0.206 Sum_probs=194.0
Q ss_pred ceEEecCCccceeEEEEcCC----CCEEEEecCCCeEEEEeCCCCeE--EEEEeeecCCcceEEEEEeecCCCCeEEEEe
Q 022870 10 PVAVLRGHRASVTDVCFHQT----KPILFAGTTGGELRIWDTVQHRT--VSSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (291)
Q Consensus 10 ~~~~l~~h~~~v~~l~~~~~----~~~l~s~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~ 83 (291)
..+.+++|.++|++++|+|+ +.+|+||+.|++|+|||+.+++. ...+.+|... |.+++|++ ++.++++++
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~--v~~~~~~~--~~~~l~s~s 99 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLG--VVSVDISH--TLPIAASSS 99 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC--EEEEEECS--SSSEEEEEE
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCC--EEEEEECC--CCCEEEEEe
Confidence 45677899999999999974 56899999999999999887654 4457778754 99999999 889999999
Q ss_pred CCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCC
Q 022870 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAE 159 (291)
Q Consensus 84 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 159 (291)
.|++|++||+++++... .+...........+++.... .......+...+|++........ +..+.. ++|+|+
T Consensus 100 ~D~~i~lWd~~~~~~~~--~~~~~~~~~~~~~~spdg~~-l~~g~~dg~v~i~~~~~~~~~~~-~~~~~~~v~~~~~spd 175 (321)
T 3ow8_A 100 LDAHIRLWDLENGKQIK--SIDAGPVDAWTLAFSPDSQY-LATGTHVGKVNIFGVESGKKEYS-LDTRGKFILSIAYSPD 175 (321)
T ss_dssp TTSEEEEEETTTTEEEE--EEECCTTCCCCEEECTTSSE-EEEECTTSEEEEEETTTCSEEEE-EECSSSCEEEEEECTT
T ss_pred CCCcEEEEECCCCCEEE--EEeCCCccEEEEEECCCCCE-EEEEcCCCcEEEEEcCCCceeEE-ecCCCceEEEEEECCC
Confidence 99999999999876533 11112222222333332221 22223345566777765543322 222322 899999
Q ss_pred CCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEcc
Q 022870 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 239 (291)
Q Consensus 160 ~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~ 239 (291)
++.++ +|+.|+.|++||+++++.+..+. +|.. .+.++. |+|+ ++ +|++|+.||.|++||++
T Consensus 176 g~~la--sg~~dg~i~iwd~~~~~~~~~~~--------~h~~----~v~~l~-~spd---~~-~l~s~s~dg~i~iwd~~ 236 (321)
T 3ow8_A 176 GKYLA--SGAIDGIINIFDIATGKLLHTLE--------GHAM----PIRSLT-FSPD---SQ-LLVTASDDGYIKIYDVQ 236 (321)
T ss_dssp SSEEE--EEETTSCEEEEETTTTEEEEEEC--------CCSS----CCCEEE-ECTT---SC-EEEEECTTSCEEEEETT
T ss_pred CCEEE--EEcCCCeEEEEECCCCcEEEEEc--------ccCC----ceeEEE-EcCC---CC-EEEEEcCCCeEEEEECC
Confidence 97655 67779999999999999988887 6643 566676 9998 44 99999999999999999
Q ss_pred CCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 240 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 240 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+ .+.+..+.+|...|.+++|+|++.+|++++.|+.|++||++++++++++
T Consensus 237 ~-~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 286 (321)
T 3ow8_A 237 H-ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 286 (321)
T ss_dssp T-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred C-cceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE
Confidence 8 7888999999999999999999999999999999999999999988765
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.6e-40 Score=263.41 Aligned_cols=253 Identities=13% Similarity=0.147 Sum_probs=184.9
Q ss_pred eEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEE----EeeecCCcceEEEEEeecCCCCeEEEEeCCC
Q 022870 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSS----SWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (291)
.....+|...|++++|+|++. +++++.||+|+|||+.+++.... ...|. .+|.+++|+| ++++|++|+.|+
T Consensus 87 ~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~--~~V~~v~~sp--dg~~l~sgs~dg 161 (357)
T 4g56_B 87 CTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHD--DIVKTLSVFS--DGTQAVSGGKDF 161 (357)
T ss_dssp CSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCS--SCEEEEEECS--SSSEEEEEETTS
T ss_pred ecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCC--CCEEEEEECC--CCCEEEEEeCCC
Confidence 344557999999999999985 55678899999999988765432 33555 4599999999 999999999999
Q ss_pred eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCcccccc-CCCCCC----cccCCCCC
Q 022870 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTD-SLCDSK----DDVPAEGP 161 (291)
Q Consensus 87 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~ 161 (291)
+|++||+++++... .+..+........+.+............+...+|+++..+..... ...+.. ++|+|++.
T Consensus 162 ~v~iwd~~~~~~~~--~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~ 239 (357)
T 4g56_B 162 SVKVWDLSQKAVLK--SYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKD 239 (357)
T ss_dssp CEEEEETTTTEEEE--EECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTST
T ss_pred eEEEEECCCCcEEE--EEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhccc
Confidence 99999999886543 233344445555555554444445556677888888776644432 233333 89999988
Q ss_pred cEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCC
Q 022870 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 241 (291)
Q Consensus 162 ~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~ 241 (291)
.+++ +|+.|+.|++||+++++++..+. +|. ..+.+++ |+|++ ..+|++|+.||.|+|||+++
T Consensus 240 ~~la-~g~~d~~i~~wd~~~~~~~~~~~--------~~~----~~v~~l~-~sp~~---~~~lasgs~D~~i~iwd~~~- 301 (357)
T 4g56_B 240 DTFA-CGDETGNVSLVNIKNPDSAQTSA--------VHS----QNITGLA-YSYHS---SPFLASISEDCTVAVLDADF- 301 (357)
T ss_dssp TEEE-EEESSSCEEEEESSCGGGCEEEC--------CCS----SCEEEEE-ECSSS---SCCEEEEETTSCEEEECTTS-
T ss_pred ceEE-EeecccceeEEECCCCcEeEEEe--------ccc----eeEEEEE-EcCCC---CCEEEEEeCCCEEEEEECCC-
Confidence 7776 56679999999999999988887 563 4567776 99983 22899999999999999997
Q ss_pred CCceeeccccccceeEEEeec-CCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 242 GIPLTAMKVHLEPVLCLSIDE-SCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 242 ~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
++++.. .+|.+.|++++|+| ++.+|+|+|.||+|++|++.+......
T Consensus 302 ~~~~~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~~ 349 (357)
T 4g56_B 302 SEVFRD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTEN 349 (357)
T ss_dssp CEEEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-------
T ss_pred CcEeEE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc
Confidence 666554 47999999999998 789999999999999999987554433
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-39 Score=264.92 Aligned_cols=248 Identities=18% Similarity=0.309 Sum_probs=197.7
Q ss_pred CCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCe
Q 022870 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (291)
Q Consensus 8 ~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (291)
.+...++.+|.+.|++++|+|++.+|++|+.|++|++||+.+++++..+.+|... |.+++|+| ++++|++|+.|++
T Consensus 140 ~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~--V~~v~~~p--~~~~l~s~s~D~~ 215 (410)
T 1vyh_C 140 GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVSIMP--NGDHIVSASRDKT 215 (410)
T ss_dssp CCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSC--EEEEEECS--SSSEEEEEETTSE
T ss_pred CcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCC--EEEEEEeC--CCCEEEEEeCCCe
Confidence 4667899999999999999999999999999999999999999999999999855 99999999 9999999999999
Q ss_pred EEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCCCC--
Q 022870 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGP-- 161 (291)
Q Consensus 88 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-- 161 (291)
|++||++++.... .+..+........+..... ........+...+|++....... .+.+|.. ++|+|++.
T Consensus 216 i~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~ 291 (410)
T 1vyh_C 216 IKMWEVQTGYCVK--TFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVVATKECKA-ELREHRHVVECISWAPESSYS 291 (410)
T ss_dssp EEEEETTTCCEEE--EEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEE-EECCCSSCEEEEEECCSCGGG
T ss_pred EEEEECCCCcEEE--EEeCCCccEEEEEECCCCC-EEEEEcCCCeEEEEECCCCceee-EecCCCceEEEEEEcCccccc
Confidence 9999999886533 2222223333333332221 22334455677888887655433 3344544 77888632
Q ss_pred -----------------cEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEE
Q 022870 162 -----------------KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNV 224 (291)
Q Consensus 162 -----------------~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l 224 (291)
.+++ +|+.|+.|++||+++++++..+. +|. ..+.++. |+|+ |+ +|
T Consensus 292 ~~~~~~~~~~~~~~~~g~~l~-sgs~D~~i~iwd~~~~~~~~~~~--------~h~----~~v~~v~-~~~~---g~-~l 353 (410)
T 1vyh_C 292 SISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLV--------GHD----NWVRGVL-FHSG---GK-FI 353 (410)
T ss_dssp GGGGCCSCC-------CCEEE-EEETTSEEEEEETTTTEEEEEEE--------CCS----SCEEEEE-ECSS---SS-CE
T ss_pred chhhhccccccccCCCCCEEE-EEeCCCeEEEEECCCCceEEEEE--------CCC----CcEEEEE-EcCC---CC-EE
Confidence 2344 67789999999999999998887 664 3567776 9998 44 89
Q ss_pred EeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcC
Q 022870 225 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (291)
Q Consensus 225 ~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~ 282 (291)
++|+.||.|++||+++ ++++..+.+|...|++++|+|++.+|++|+.||.|++|+++
T Consensus 354 ~s~s~D~~i~vwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 354 LSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEETTTEEEEECCTT-SCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEEeCCCeEEEEECCC-CceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 9999999999999998 88899999999999999999999999999999999999864
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=251.61 Aligned_cols=244 Identities=17% Similarity=0.235 Sum_probs=199.1
Q ss_pred eEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEE
Q 022870 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~i 90 (291)
...+.+|...|.+++|++++.++++++.|++|++||+.+++.+..+..+... +.+++|+| ++++|++++.||.|++
T Consensus 73 ~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~--~~~~~~sp--dg~~l~~g~~dg~v~i 148 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVD--AWTLAFSP--DSQYLATGTHVGKVNI 148 (321)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTC--CCCEEECT--TSSEEEEECTTSEEEE
T ss_pred eeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCcc--EEEEEECC--CCCEEEEEcCCCcEEE
Confidence 4578999999999999999999999999999999999999999999888754 99999999 9999999999999999
Q ss_pred EECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCcEEEE
Q 022870 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYMAV 166 (291)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 166 (291)
||+++++... .+..+........+++.... .......+...+|++....... .+.+|.. ++|+|++..++
T Consensus 149 ~~~~~~~~~~--~~~~~~~~v~~~~~spdg~~-lasg~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~spd~~~l~-- 222 (321)
T 3ow8_A 149 FGVESGKKEY--SLDTRGKFILSIAYSPDGKY-LASGAIDGIINIFDIATGKLLH-TLEGHAMPIRSLTFSPDSQLLV-- 222 (321)
T ss_dssp EETTTCSEEE--EEECSSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEEE-EECCCSSCCCEEEECTTSCEEE--
T ss_pred EEcCCCceeE--EecCCCceEEEEEECCCCCE-EEEEcCCCeEEEEECCCCcEEE-EEcccCCceeEEEEcCCCCEEE--
Confidence 9999876432 22222333444444444332 2233445667888887665433 3445544 89999997554
Q ss_pred ecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCcee
Q 022870 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (291)
Q Consensus 167 ~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~ 246 (291)
+|+.|+.|++||+++++....+. +|. ..+.+++ |+|+ +. +|++|+.|+.|++||+++ ++++.
T Consensus 223 s~s~dg~i~iwd~~~~~~~~~~~--------~h~----~~v~~~~-~sp~---~~-~l~s~s~D~~v~iwd~~~-~~~~~ 284 (321)
T 3ow8_A 223 TASDDGYIKIYDVQHANLAGTLS--------GHA----SWVLNVA-FCPD---DT-HFVSSSSDKSVKVWDVGT-RTCVH 284 (321)
T ss_dssp EECTTSCEEEEETTTCCEEEEEC--------CCS----SCEEEEE-ECTT---SS-EEEEEETTSCEEEEETTT-TEEEE
T ss_pred EEcCCCeEEEEECCCcceeEEEc--------CCC----CceEEEE-ECCC---CC-EEEEEeCCCcEEEEeCCC-CEEEE
Confidence 67789999999999999888887 663 4577787 9998 44 899999999999999998 88999
Q ss_pred eccccccceeEEEeecCCCeeEEecCCCeEEEEEcC
Q 022870 247 AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (291)
Q Consensus 247 ~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~ 282 (291)
.+.+|...|++++|+|++.+|++++.||.|++||..
T Consensus 285 ~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 285 TFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999999999999999999999999999999999963
No 10
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.5e-38 Score=253.09 Aligned_cols=248 Identities=18% Similarity=0.257 Sum_probs=191.4
Q ss_pred CCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEe------------------------------
Q 022870 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW------------------------------ 57 (291)
Q Consensus 8 ~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~------------------------------ 57 (291)
.+...+|++|.+.|++++|+|++.+|+||+.||+|++||..+++....+.
T Consensus 54 ~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 54 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred cEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 45678999999999999999999999999999999999987766544433
Q ss_pred ------------------eecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecc
Q 022870 58 ------------------VHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119 (291)
Q Consensus 58 ------------------~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (291)
.|. ..|.+++|+| ++..|++++.|++|++||+++++... .+..+........+.+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~--~~~~l~t~s~D~~v~lwd~~~~~~~~--~~~~h~~~v~~~~~~~~ 207 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHT--NYLSACSFTN--SDMQILTASGDGTCALWDVESGQLLQ--SFHGHGADVLCLDLAPS 207 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECS--SCEEEEEECS--SSSEEEEEETTSEEEEEETTTCCEEE--EEECCSSCEEEEEECCC
T ss_pred EEeccccccccccceeeeccC--CcEEEEEEeC--CCCEEEEEeCCCcEEEEeCCCCeEEE--EEcCCCCCeEEEEEEeC
Confidence 344 3488888888 88899999999999999998876533 22223333334444433
Q ss_pred cC-ccceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccC
Q 022870 120 KE-PYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCG 194 (291)
Q Consensus 120 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~ 194 (291)
.. .........+...+|+++...... .+.+|.. ++|+|++..++ +|+.|+.|++||++..+.+..+..
T Consensus 208 ~~g~~l~sgs~Dg~v~~wd~~~~~~~~-~~~~h~~~v~~v~~~p~~~~l~--s~s~D~~v~lwd~~~~~~~~~~~~---- 280 (354)
T 2pbi_B 208 ETGNTFVSGGCDKKAMVWDMRSGQCVQ-AFETHESDVNSVRYYPSGDAFA--SGSDDATCRLYDLRADREVAIYSK---- 280 (354)
T ss_dssp SSCCEEEEEETTSCEEEEETTTCCEEE-EECCCSSCEEEEEECTTSSEEE--EEETTSCEEEEETTTTEEEEEECC----
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEE-EecCCCCCeEEEEEeCCCCEEE--EEeCCCeEEEEECCCCcEEEEEcC----
Confidence 22 233444556778889887765433 3455555 89999997544 677799999999999887766652
Q ss_pred CCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCC
Q 022870 195 GSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ 274 (291)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg 274 (291)
+. ....+.++. |+|+ |+ +|++|+.|+.|++||+.+ ++.+..+.+|...|++++|+|++++|++|+.||
T Consensus 281 ----~~--~~~~~~~~~-~s~~---g~-~l~~g~~d~~i~vwd~~~-~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 281 ----ES--IIFGASSVD-FSLS---GR-LLFAGYNDYTINVWDVLK-GSRVSILFGHENRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp ----TT--CCSCEEEEE-ECTT---SS-EEEEEETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred ----CC--cccceeEEE-EeCC---CC-EEEEEECCCcEEEEECCC-CceEEEEECCCCcEEEEEECCCCCEEEEEcCCC
Confidence 21 122456676 9998 44 999999999999999988 888899999999999999999999999999999
Q ss_pred eEEEEE
Q 022870 275 KIVLYN 280 (291)
Q Consensus 275 ~i~vw~ 280 (291)
.|++|+
T Consensus 349 ~v~vW~ 354 (354)
T 2pbi_B 349 TLRVWA 354 (354)
T ss_dssp EEEEEC
T ss_pred CEEecC
Confidence 999996
No 11
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.4e-38 Score=246.54 Aligned_cols=256 Identities=15% Similarity=0.151 Sum_probs=189.1
Q ss_pred eEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCC--CeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeE
Q 022870 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ--HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i 88 (291)
+..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.. .+++.++.+|... |.+++|++..++++|++|+.|++|
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~--V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGP--VWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSC--EEEEEECCGGGCSEEEEEETTTEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCC--eEEEEecCCCcCCEEEEEcCCCEE
Confidence 456889999999999999999999999999999999874 3677888999855 999999862237899999999999
Q ss_pred EEEECCCCCCCCCCccccccceEEEEEeeccc-CccceeccCCCCceeeecccCcc-ccccCCCCCC----cccCCCC--
Q 022870 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK-EPYANAKQANEPKDCYEREVGET-VDTDSLCDSK----DDVPAEG-- 160 (291)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~-- 160 (291)
++||+++++......+..+........+.+.. ..........+...+|+++.... ....+.+|.. ++|+|++
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccc
Confidence 99999876532211222333445555555442 22333444556677788765532 2233445554 7899873
Q ss_pred ----------CcEEEEecCCcCeEEEEeCCCcc----eeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEe
Q 022870 161 ----------PKYMAVAGEQLSEVEIWDLNTAE----RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (291)
Q Consensus 161 ----------~~~~~~~g~~d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~ 226 (291)
..+++ +|+.|+.|++||+++++ ....+. +| ...+.+++ |+|++..+. +|++
T Consensus 160 ~~~~~~~~~~~~~l~-sgs~D~~v~lwd~~~~~~~~~~~~~l~--------~H----~~~V~~v~-~sp~~~~~~-~las 224 (297)
T 2pm7_B 160 EDGEHNGTKESRKFV-TGGADNLVKIWKYNSDAQTYVLESTLE--------GH----SDWVRDVA-WSPTVLLRS-YMAS 224 (297)
T ss_dssp ----------CCEEE-EEETTSCEEEEEEETTTTEEEEEEEEC--------CC----SSCEEEEE-ECCCCSSSE-EEEE
T ss_pred ccccCCCCCCcceEE-EEcCCCcEEEEEEcCCCceEEEEEEec--------CC----CCceEEEE-ECCCCCCce-EEEE
Confidence 23444 67779999999998765 444555 66 44678887 999842234 8999
Q ss_pred ecCCCcEEEEEccCCCC--ceeec--cccccceeEEEeecCCCeeEEecCCCeEEEEEcCC
Q 022870 227 GYEDGSILVWDIRNPGI--PLTAM--KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (291)
Q Consensus 227 g~~dg~i~vwd~~~~~~--~~~~~--~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~ 283 (291)
|+.|+.|++||+++... ....+ ..|...|.+++|+|++++|++++.||.|++|+.+.
T Consensus 225 ~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 225 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 99999999999986321 12233 56788999999999999999999999999999874
No 12
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1e-37 Score=248.27 Aligned_cols=251 Identities=16% Similarity=0.219 Sum_probs=186.6
Q ss_pred ceEEecCCccceeEEEEcCC-CCEEEEecCCCeEEEEeCCCC-----eEEEEEeeecCCcceEEEEEeecCCCCeEEEEe
Q 022870 10 PVAVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQH-----RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (291)
Q Consensus 10 ~~~~l~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~ 83 (291)
+..+|+||++.|++|+|+|+ +++|+||+.||+|+|||+.+. .+...+.+|... |.+++|+| ++.+|++++
T Consensus 30 l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~--V~~~~~s~--dg~~l~s~~ 105 (340)
T 4aow_A 30 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHF--VSDVVISS--DGQFALSGS 105 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSC--EEEEEECT--TSSEEEEEE
T ss_pred EEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCC--EEEEEECC--CCCEEEEEc
Confidence 45689999999999999996 689999999999999998764 356677888855 99999999 999999999
Q ss_pred CCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCC
Q 022870 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAE 159 (291)
Q Consensus 84 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 159 (291)
.|+.|++|+........ .............+.... .............+|+............+|.. ++|+++
T Consensus 106 ~d~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTR--RFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp TTSEEEEEETTTTEEEE--EEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred ccccceEEeecccceee--eecCCCCceeEEEEeecC-ccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence 99999999998765432 112222222222222222 22233344556677777666665556666655 788888
Q ss_pred CCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEcc
Q 022870 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 239 (291)
Q Consensus 160 ~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~ 239 (291)
+...++++++.|+.|++||+++++.+..+. +|. ..+.++. |+|+ ++ +|++|+.||.|++||++
T Consensus 183 ~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~--------~h~----~~v~~~~-~s~~---~~-~l~s~s~Dg~i~iwd~~ 245 (340)
T 4aow_A 183 SSNPIIVSCGWDKLVKVWNLANCKLKTNHI--------GHT----GYLNTVT-VSPD---GS-LCASGGKDGQAMLWDLN 245 (340)
T ss_dssp SSSCEEEEEETTSCEEEEETTTTEEEEEEC--------CCS----SCEEEEE-ECTT---SS-EEEEEETTCEEEEEETT
T ss_pred CCCcEEEEEcCCCEEEEEECCCCceeeEec--------CCC----CcEEEEE-ECCC---CC-EEEEEeCCCeEEEEEec
Confidence 766665577789999999999999888887 663 4577776 9998 44 89999999999999987
Q ss_pred CCCCceee-------------------------------------------------ccccccceeEEEeecCCCeeEEe
Q 022870 240 NPGIPLTA-------------------------------------------------MKVHLEPVLCLSIDESCNGGISG 270 (291)
Q Consensus 240 ~~~~~~~~-------------------------------------------------~~~h~~~v~~~~~~~~~~~l~s~ 270 (291)
+ .+++.. ..+|...|++++|+|++++|++|
T Consensus 246 ~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 324 (340)
T 4aow_A 246 E-GKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 324 (340)
T ss_dssp T-TEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEE
T ss_pred c-CceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEE
Confidence 6 322111 12466788899999999999999
Q ss_pred cCCCeEEEEEcCCCc
Q 022870 271 GADQKIVLYNLDHST 285 (291)
Q Consensus 271 s~dg~i~vw~~~~~~ 285 (291)
+.||.|+|||+++|+
T Consensus 325 s~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 325 YTDNLVRVWQVTIGT 339 (340)
T ss_dssp ETTSCEEEEEEEC--
T ss_pred eCCCEEEEEeCCCcC
Confidence 999999999988875
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4e-38 Score=248.54 Aligned_cols=218 Identities=16% Similarity=0.237 Sum_probs=175.3
Q ss_pred CceEEecCCccceeEEEEcCCC-CEEEEecCCCeEEEEeCCC-----CeEEEEEeeecCCcceEEEEEeecCCCCeEEEE
Q 022870 9 DPVAVLRGHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQ-----HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~iwd~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~ 82 (291)
.+..+|++|.++|++++|+|++ ++|++|+.|++|++||+.. +.++..+.+|... |.+++|+| ++.+|++|
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~--v~~~~~s~--dg~~l~s~ 83 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHI--VQDCTLTA--DGAYALSA 83 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSC--EEEEEECT--TSSEEEEE
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCccc--EEEEEECC--CCCEEEEE
Confidence 5577899999999999999954 8999999999999999753 3456778888855 99999999 99999999
Q ss_pred eCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCc
Q 022870 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPK 162 (291)
Q Consensus 83 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (291)
+.|++|++||+++++... .+..+...... ++|+|++..
T Consensus 84 s~D~~v~~wd~~~~~~~~--~~~~h~~~v~~----------------------------------------~~~~~~~~~ 121 (319)
T 3frx_A 84 SWDKTLRLWDVATGETYQ--RFVGHKSDVMS----------------------------------------VDIDKKASM 121 (319)
T ss_dssp ETTSEEEEEETTTTEEEE--EEECCSSCEEE----------------------------------------EEECTTSCE
T ss_pred eCCCEEEEEECCCCCeeE--EEccCCCcEEE----------------------------------------EEEcCCCCE
Confidence 999999999999875432 11111111111 558898875
Q ss_pred EEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCC---CCceEEEeecCCCcEEEEEcc
Q 022870 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS---QGFVNVLAGYEDGSILVWDIR 239 (291)
Q Consensus 163 ~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~g~~~l~~g~~dg~i~vwd~~ 239 (291)
++ +|+.|+.|++||++. +++..+. +|. ..+.++. |.|... ++. .+++++.|+.|++||++
T Consensus 122 l~--s~s~D~~i~vwd~~~-~~~~~~~--------~h~----~~v~~~~-~~~~~~~~~~~~-~l~s~~~d~~i~~wd~~ 184 (319)
T 3frx_A 122 II--SGSRDKTIKVWTIKG-QCLATLL--------GHN----DWVSQVR-VVPNEKADDDSV-TIISAGNDKMVKAWNLN 184 (319)
T ss_dssp EE--EEETTSCEEEEETTS-CEEEEEC--------CCS----SCEEEEE-ECCC------CC-EEEEEETTSCEEEEETT
T ss_pred EE--EEeCCCeEEEEECCC-CeEEEEe--------ccC----CcEEEEE-EccCCCCCCCcc-EEEEEeCCCEEEEEECC
Confidence 54 677899999999974 5566666 563 3566676 888532 233 79999999999999999
Q ss_pred CCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 240 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 240 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+ .+....+.+|...|++++|+|++++|++++.||.|++||+++++.++++
T Consensus 185 ~-~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 185 Q-FQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234 (319)
T ss_dssp T-TEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred c-chhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 8 7888889999999999999999999999999999999999999887654
No 14
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=8.6e-38 Score=246.29 Aligned_cols=255 Identities=15% Similarity=0.134 Sum_probs=180.0
Q ss_pred EEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCe--EEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEE
Q 022870 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (291)
Q Consensus 12 ~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~ 89 (291)
..+.+|.+.|++++|+|+|++|++|+.|++|+|||+.+++ .+..+.+|... |.+++|++..++++|++|+.|++|+
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~--V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGP--VWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSC--EEEEEECCGGGSSCEEEEETTSCEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCcc--EEEEEeCCCCCCCEEEEEECCCEEE
Confidence 3567999999999999999999999999999999998774 46678888855 9999998622378999999999999
Q ss_pred EEECCCCCCCCCCccccccceEEEEEeeccc-CccceeccCCCCceeeecccCcc--ccccCCCCCC----cccCCCCC-
Q 022870 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVK-EPYANAKQANEPKDCYEREVGET--VDTDSLCDSK----DDVPAEGP- 161 (291)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~- 161 (291)
+||+++++......+..+........+.+.. ..........+...+|++..... ....+.+|.. ++|+|+..
T Consensus 85 iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp EECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred EEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 9999876432111111223333444444432 12233444556677787765432 2334445544 78888731
Q ss_pred ---------------cEEEEecCCcCeEEEEeCCCc---ceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCC-Cce
Q 022870 162 ---------------KYMAVAGEQLSEVEIWDLNTA---ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ-GFV 222 (291)
Q Consensus 162 ---------------~~~~~~g~~d~~i~~wd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-g~~ 222 (291)
.+++ +|+.|+.|++||++.. ++...+. +| ...+.+++ |+|++.. +.
T Consensus 165 ~~~~~~~~~~~~~~~~~l~-sgs~D~~v~lWd~~~~~~~~~~~~l~--------~h----~~~V~~v~-~sp~~~~~~~- 229 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFA-SGGCDNLIKLWKEEEDGQWKEEQKLE--------AH----SDWVRDVA-WAPSIGLPTS- 229 (316)
T ss_dssp ------CCSCCCCCCCBEE-CCBTTSBCCEEEECTTSCEEEEECCB--------CC----SSCEEEEE-CCCCSSCSCC-
T ss_pred ccccccccccCccccceEE-EecCCCeEEEEEeCCCCccceeeecc--------cC----CCceEEEE-ecCCCCCCCc-
Confidence 2344 7888999999999755 3444555 66 34677887 9998421 23
Q ss_pred EEEeecCCCcEEEEEccCCC---CceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCC
Q 022870 223 NVLAGYEDGSILVWDIRNPG---IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (291)
Q Consensus 223 ~l~~g~~dg~i~vwd~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~ 283 (291)
+|++|+.||.|++||+++.. .....+..|...|++++|+|++++|++++.||.|++|+...
T Consensus 230 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 230 TIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred eEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 89999999999999997621 12345677899999999999999999999999999999863
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.6e-37 Score=240.30 Aligned_cols=255 Identities=19% Similarity=0.298 Sum_probs=199.1
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeE
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i 88 (291)
.+..++.+|.++|++++|+|++++|++|+.||.|++|++.+++....+..|... |.+++|+| ++++|++++.|+.|
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~s~~~d~~i 89 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSS--DSNLLVSASDDKTL 89 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC--EEEEEECT--TSSEEEEEETTSEE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCc--eEEEEEcC--CCCEEEEECCCCEE
Confidence 457788999999999999999999999999999999999999999999888855 99999999 99999999999999
Q ss_pred EEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCcEE
Q 022870 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYM 164 (291)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 164 (291)
++||+++++... .+..+........+.+... ........+...+|++....... .+..|.. ++|+|++..++
T Consensus 90 ~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 90 KIWDVSSGKCLK--TLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLK-TLPAHSDPVSAVHFNRDGSLIV 165 (312)
T ss_dssp EEEETTTCCEEE--EEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCEEE-EECCCSSCEEEEEECTTSSEEE
T ss_pred EEEECCCCcEEE--EEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCEEEE-EecCCCCcEEEEEEcCCCCEEE
Confidence 999999876533 2223333444444444322 22334455677888887665433 3344444 88999987554
Q ss_pred EEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCc
Q 022870 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (291)
Q Consensus 165 ~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (291)
+++.|+.|++||+++++.+..+.. .+ ...+..+. |+|+ ++ +|++++.||.|++||+++ ++.
T Consensus 166 --~~~~d~~i~~wd~~~~~~~~~~~~-------~~----~~~~~~~~-~~~~---~~-~l~~~~~d~~i~iwd~~~-~~~ 226 (312)
T 4ery_A 166 --SSSYDGLCRIWDTASGQCLKTLID-------DD----NPPVSFVK-FSPN---GK-YILAATLDNTLKLWDYSK-GKC 226 (312)
T ss_dssp --EEETTSCEEEEETTTCCEEEEECC-------SS----CCCEEEEE-ECTT---SS-EEEEEETTTEEEEEETTT-TEE
T ss_pred --EEeCCCcEEEEECCCCceeeEEec-------cC----CCceEEEE-ECCC---CC-EEEEEcCCCeEEEEECCC-CcE
Confidence 566799999999999988777652 22 33456676 9998 44 899999999999999998 888
Q ss_pred eeeccccccceeEE--Ee-ecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 245 LTAMKVHLEPVLCL--SI-DESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 245 ~~~~~~h~~~v~~~--~~-~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+..+.+|...+..+ .+ .+++.+|++|+.||.|++||+++++++..+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 275 (312)
T 4ery_A 227 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL 275 (312)
T ss_dssp EEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEE
T ss_pred EEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhh
Confidence 88888887654433 33 467889999999999999999999887654
No 16
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.7e-37 Score=241.94 Aligned_cols=246 Identities=15% Similarity=0.233 Sum_probs=187.7
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeE
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i 88 (291)
.++.++++|...|++++|+|++.+|++|+.|++|++||+.+++++..+.+|... |.+++|+| ++.+|++|+.|++|
T Consensus 56 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~s~s~D~~i 131 (319)
T 3frx_A 56 VPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSD--VMSVDIDK--KASMIISGSRDKTI 131 (319)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC--EEEEEECT--TSCEEEEEETTSCE
T ss_pred ccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCc--EEEEEEcC--CCCEEEEEeCCCeE
Confidence 356789999999999999999999999999999999999999999999999855 99999999 99999999999999
Q ss_pred EEEECCCCCCCCCCccccccceEEEEEeecccC-----ccceeccCCCCceeeecccCccccccCCCCCC----cccCCC
Q 022870 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKE-----PYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAE 159 (291)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 159 (291)
++||++.... . .+..+........+.+... .........+....|++...... ..+.+|.. ++|+|+
T Consensus 132 ~vwd~~~~~~-~--~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~-~~~~~h~~~v~~~~~sp~ 207 (319)
T 3frx_A 132 KVWTIKGQCL-A--TLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIE-ADFIGHNSNINTLTASPD 207 (319)
T ss_dssp EEEETTSCEE-E--EECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEE-EEECCCCSCEEEEEECTT
T ss_pred EEEECCCCeE-E--EEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhh-eeecCCCCcEEEEEEcCC
Confidence 9999975421 1 1112222233333332211 12334445566778888765433 33455655 899999
Q ss_pred CCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEcc
Q 022870 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 239 (291)
Q Consensus 160 ~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~ 239 (291)
+..++ +|+.|+.|++||+++++.+..+. .+ ..+.+++ |+|+ +. +|++++.+ .+++|++.
T Consensus 208 g~~l~--s~~~dg~i~iwd~~~~~~~~~~~--------~~-----~~v~~~~-~sp~---~~-~la~~~~~-~i~v~~~~ 266 (319)
T 3frx_A 208 GTLIA--SAGKDGEIMLWNLAAKKAMYTLS--------AQ-----DEVFSLA-FSPN---RY-WLAAATAT-GIKVFSLD 266 (319)
T ss_dssp SSEEE--EEETTCEEEEEETTTTEEEEEEE--------CC-----SCEEEEE-ECSS---SS-EEEEEETT-EEEEEEET
T ss_pred CCEEE--EEeCCCeEEEEECCCCcEEEEec--------CC-----CcEEEEE-EcCC---CC-EEEEEcCC-CcEEEEeC
Confidence 97554 67779999999999999888887 22 3577787 9998 44 77777654 59999998
Q ss_pred CCCCceeecc--------ccccceeEEEeecCCCeeEEecCCCeEEEEEcCCC
Q 022870 240 NPGIPLTAMK--------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 240 ~~~~~~~~~~--------~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~ 284 (291)
. ...+..+. .|...+.+++|+|+|++|++|+.||.|++||+.++
T Consensus 267 ~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 267 P-QYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp T-EEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred c-CeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 6 54444332 45678999999999999999999999999998764
No 17
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.5e-36 Score=237.63 Aligned_cols=252 Identities=16% Similarity=0.297 Sum_probs=198.0
Q ss_pred CCCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC
Q 022870 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (291)
Q Consensus 7 ~~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (291)
..+....+.+|...|.+++|+|++++|++|+.|+.|++||+++++++..+..|... |.+++|+| ++++|++++.|+
T Consensus 54 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~--v~~~~~~~--~~~~l~s~~~d~ 129 (312)
T 4ery_A 54 DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY--VFCCNFNP--QSNLIVSGSFDE 129 (312)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC--EEEEEECS--SSSEEEEEETTS
T ss_pred CcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCC--EEEEEEcC--CCCEEEEEeCCC
Confidence 34667889999999999999999999999999999999999999999999988855 99999999 999999999999
Q ss_pred eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCc
Q 022870 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPK 162 (291)
Q Consensus 87 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 162 (291)
.|++||+++++... .+..+........+.+... ........+...+|++............+.. ++|+|+++.
T Consensus 130 ~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (312)
T 4ery_A 130 SVRIWDVKTGKCLK--TLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 206 (312)
T ss_dssp CEEEEETTTCCEEE--EECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSE
T ss_pred cEEEEECCCCEEEE--EecCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCE
Confidence 99999999876533 2222333444444444322 2233445567788888776655444433433 889999976
Q ss_pred EEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCC
Q 022870 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (291)
Q Consensus 163 ~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~ 242 (291)
++ +++.|+.|++||+++++.+..+. +|..... +.... |.+. ++. +|++|+.||.|++||+++ +
T Consensus 207 l~--~~~~d~~i~iwd~~~~~~~~~~~--------~~~~~~~--~~~~~-~~~~--~~~-~l~sg~~dg~i~vwd~~~-~ 269 (312)
T 4ery_A 207 IL--AATLDNTLKLWDYSKGKCLKTYT--------GHKNEKY--CIFAN-FSVT--GGK-WIVSGSEDNLVYIWNLQT-K 269 (312)
T ss_dssp EE--EEETTTEEEEEETTTTEEEEEEC--------SSCCSSS--CCCEE-EECS--SSC-EEEECCTTSCEEEEETTT-C
T ss_pred EE--EEcCCCeEEEEECCCCcEEEEEE--------ecCCceE--EEEEE-EEeC--CCc-EEEEECCCCEEEEEECCC-c
Confidence 65 56679999999999999888887 5544322 22222 4433 144 899999999999999998 8
Q ss_pred CceeeccccccceeEEEeecCCCeeEEec--CCCeEEEEEcC
Q 022870 243 IPLTAMKVHLEPVLCLSIDESCNGGISGG--ADQKIVLYNLD 282 (291)
Q Consensus 243 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~dg~i~vw~~~ 282 (291)
+.+..+.+|...|.+++|+|++++|++++ .|+.|++|+.+
T Consensus 270 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 270 EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred hhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 88999999999999999999999999986 69999999975
No 18
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.2e-37 Score=244.66 Aligned_cols=249 Identities=16% Similarity=0.203 Sum_probs=181.0
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeE
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i 88 (291)
.+...+.+|...|++++|+|++.++++|+.|++|++||+.+++.+..+.+|... |.+++|+| ++++|++++.|++|
T Consensus 67 ~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~--v~~v~~sp--~~~~l~s~~~d~~i 142 (343)
T 2xzm_R 67 IPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSE--VYSVAFSP--DNRQILSAGAEREI 142 (343)
T ss_dssp EEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSC--EEEEEECS--STTEEEEEETTSCE
T ss_pred cccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCc--EEEEEECC--CCCEEEEEcCCCEE
Confidence 356788999999999999999999999999999999999999999999999855 99999999 99999999999999
Q ss_pred EEEECCCCCCCCCCccccccceEEEEEeecccC---------ccceeccCCCCceeeecccCccccccCCCCCC----cc
Q 022870 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKE---------PYANAKQANEPKDCYEREVGETVDTDSLCDSK----DD 155 (291)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 155 (291)
++||+.............+........+.+... .........+...+|+.. ......+.+|.. ++
T Consensus 143 ~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~ 220 (343)
T 2xzm_R 143 KLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLS 220 (343)
T ss_dssp EEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEE
T ss_pred EEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEE
Confidence 999997432211000112222334444443321 122233344556666632 222233445555 89
Q ss_pred cCCCCCcEEEEecCCcCeEEEEeCCCc-ceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEE
Q 022870 156 VPAEGPKYMAVAGEQLSEVEIWDLNTA-ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 234 (291)
Q Consensus 156 ~~~~~~~~~~~~g~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~ 234 (291)
|+|+++.++ +|+.|+.|++||++.. .....+.. ...+.+++ |+|+ ++ +++ ++.|+.|+
T Consensus 221 ~s~~g~~l~--sgs~dg~v~iwd~~~~~~~~~~~~~-------------~~~v~~v~-~sp~---~~-~la-~~~d~~v~ 279 (343)
T 2xzm_R 221 ISPNGKYIA--TGGKDKKLLIWDILNLTYPQREFDA-------------GSTINQIA-FNPK---LQ-WVA-VGTDQGVK 279 (343)
T ss_dssp ECTTSSEEE--EEETTCEEEEEESSCCSSCSEEEEC-------------SSCEEEEE-ECSS---SC-EEE-EEESSCEE
T ss_pred ECCCCCEEE--EEcCCCeEEEEECCCCcccceeecC-------------CCcEEEEE-ECCC---CC-EEE-EECCCCEE
Confidence 999997655 6777999999999543 34444431 22477787 9998 43 555 45688899
Q ss_pred EEEccCCCCcee--ecc-----------ccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCc
Q 022870 235 VWDIRNPGIPLT--AMK-----------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 235 vwd~~~~~~~~~--~~~-----------~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~ 285 (291)
+||+.+ .+... .+. +|...|++++|+|++++|++|+.||.|++|+++++.
T Consensus 280 iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 280 IFNLMT-QSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp EEESSS-CCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred EEEeCC-CCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 999987 44332 332 688899999999999999999999999999987653
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3e-36 Score=239.93 Aligned_cols=246 Identities=16% Similarity=0.194 Sum_probs=194.0
Q ss_pred CCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCC----eEEEEEeeecCCcceEEEEEeecCCCCeEEEEe
Q 022870 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH----RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (291)
Q Consensus 8 ~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~ 83 (291)
.+.+..+..|...|.+++|+|++++|++|+.|+.|++||+.++ .....+.+|... |.++.|++ + ..+++++
T Consensus 87 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~--~-~~l~s~s 161 (340)
T 1got_B 87 TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGY--LSCCRFLD--D-NQIVTSS 161 (340)
T ss_dssp CCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSC--EEEEEEEE--T-TEEEEEE
T ss_pred CCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCcc--EEEEEECC--C-CcEEEEE
Confidence 4667788999999999999999999999999999999999865 456667788755 99999998 6 5699999
Q ss_pred CCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCC
Q 022870 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAE 159 (291)
Q Consensus 84 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 159 (291)
.|++|++||+++++... .+..+........+.+... ........+...+|++....... .+.+|.. ++|+|+
T Consensus 162 ~d~~i~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~~~~-~~~~h~~~v~~v~~~p~ 237 (340)
T 1got_B 162 GDTTCALWDIETGQQTT--TFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGMCRQ-TFTGHESDINAICFFPN 237 (340)
T ss_dssp TTSCEEEEETTTTEEEE--EECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSEEE-EECCCSSCEEEEEECTT
T ss_pred CCCcEEEEECCCCcEEE--EEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeeEE-EEcCCcCCEEEEEEcCC
Confidence 99999999999876533 2222333444444444322 23344456678888887665433 3455555 899999
Q ss_pred CCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEcc
Q 022870 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 239 (291)
Q Consensus 160 ~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~ 239 (291)
+..++ +|+.|+.|++||+++++.+..+.. + . ....+.++. |+|+ |+ +|++|+.||.|++||+.
T Consensus 238 ~~~l~--s~s~d~~v~iwd~~~~~~~~~~~~--------~-~-~~~~v~~~~-~s~~---g~-~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 238 GNAFA--TGSDDATCRLFDLRADQELMTYSH--------D-N-IICGITSVS-FSKS---GR-LLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp SSEEE--EEETTSCEEEEETTTTEEEEEECC--------T-T-CCSCEEEEE-ECTT---SS-EEEEEETTSEEEEEETT
T ss_pred CCEEE--EEcCCCcEEEEECCCCcEEEEEcc--------C-C-cccceEEEE-ECCC---CC-EEEEECCCCeEEEEEcc
Confidence 97554 677799999999999887776652 1 1 123567787 9998 44 99999999999999999
Q ss_pred CCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEE
Q 022870 240 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 280 (291)
Q Consensus 240 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~ 280 (291)
+ .+.+..+.+|...|++++|+|++.+|++|+.||.|++||
T Consensus 301 ~-~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 301 K-ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp T-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred c-CcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 8 888899999999999999999999999999999999996
No 20
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.2e-36 Score=238.45 Aligned_cols=251 Identities=18% Similarity=0.192 Sum_probs=194.4
Q ss_pred CCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCe
Q 022870 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (291)
Q Consensus 8 ~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (291)
.+++..+.+|..+|.+++|+|++++|++|+.|++|++||+.+++++..+..|... |.+++|+| ++.+|++|+.|++
T Consensus 45 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~sgs~D~~ 120 (304)
T 2ynn_A 45 QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDY--IRSIAVHP--TKPYVLSGSDDLT 120 (304)
T ss_dssp TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSC--EEEEEECS--SSSEEEEEETTSC
T ss_pred CceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCc--EEEEEEcC--CCCEEEEECCCCe
Confidence 3567889999999999999999999999999999999999999999999999855 99999999 9999999999999
Q ss_pred EEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCC--CCC
Q 022870 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPA--EGP 161 (291)
Q Consensus 88 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~ 161 (291)
|++||++++.... ..+..+........+.+............+...+|++............+.. ++|+| ++.
T Consensus 121 v~lWd~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 199 (304)
T 2ynn_A 121 VKLWNWENNWALE-QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP 199 (304)
T ss_dssp EEEEEGGGTTEEE-EEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCC
T ss_pred EEEEECCCCcchh-hhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCC
Confidence 9999998763221 0222333444445554433333444555667888888665544333334433 66766 444
Q ss_pred cEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCC
Q 022870 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 241 (291)
Q Consensus 162 ~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~ 241 (291)
. ++ +|+.|+.|++||+++++++..+. +|.. .+.++. |+|++ . +|++|+.||.|++||+++
T Consensus 200 ~-l~-s~s~D~~i~iWd~~~~~~~~~~~--------~h~~----~v~~~~-~~p~~---~-~l~s~s~Dg~i~iWd~~~- 259 (304)
T 2ynn_A 200 Y-MI-TASDDLTIKIWDYQTKSCVATLE--------GHMS----NVSFAV-FHPTL---P-IIISGSEDGTLKIWNSST- 259 (304)
T ss_dssp E-EE-EEETTSEEEEEETTTTEEEEEEE--------CCSS----CEEEEE-ECSSS---S-EEEEEETTSCEEEEETTT-
T ss_pred E-EE-EEcCCCeEEEEeCCCCccceeeC--------CCCC----CEEEEE-ECCCC---C-EEEEEcCCCeEEEEECCC-
Confidence 3 33 67779999999999999999988 7743 566776 99984 3 899999999999999998
Q ss_pred CCceeeccccccceeEEEeecCCC--eeEEecCCCeEEEEEcCCC
Q 022870 242 GIPLTAMKVHLEPVLCLSIDESCN--GGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 242 ~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~s~dg~i~vw~~~~~ 284 (291)
++.+..+..|...+++++|+|++. ++++|+.| .+.+|++...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~~ 303 (304)
T 2ynn_A 260 YKVEKTLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGND 303 (304)
T ss_dssp CCEEEEECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC--
T ss_pred CceeeeccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEeccC
Confidence 889999999999999999988875 46777655 5888887653
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.4e-36 Score=259.55 Aligned_cols=250 Identities=15% Similarity=0.153 Sum_probs=193.4
Q ss_pred CCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCC
Q 022870 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 95 (291)
.+++.+.+++|+|+|++|++++ ++.|++||+.+++....+.+|... |++++|+| +|++|++|+.|++|+|||+.+
T Consensus 16 ~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~--v~~~~~sp--dg~~lasg~~d~~v~lWd~~~ 90 (611)
T 1nr0_A 16 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQ--TTVAKTSP--SGYYCASGDVHGNVRIWDTTQ 90 (611)
T ss_dssp CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSC--EEEEEECT--TSSEEEEEETTSEEEEEESSS
T ss_pred cccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCc--eEEEEECC--CCcEEEEEeCCCCEEEeECCC
Confidence 4578889999999999999987 569999999988888999999865 99999999 999999999999999999976
Q ss_pred CCCCCCCccccccceEEEEEeecccCccceeccCCC-CceeeecccCccccccCCCCCC----cccCCCCCcEEEEecCC
Q 022870 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANE-PKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYMAVAGEQ 170 (291)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~ 170 (291)
++......+..+........+++............. ...++..+.. .....+.+|.. ++|+|+++..++ +|+.
T Consensus 91 ~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~-~~~~~l~gh~~~v~~v~f~p~~~~~l~-s~s~ 168 (611)
T 1nr0_A 91 TTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG-TSNGNLTGQARAMNSVDFKPSRPFRII-SGSD 168 (611)
T ss_dssp TTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC-CBCBCCCCCSSCEEEEEECSSSSCEEE-EEET
T ss_pred CcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC-CCcceecCCCCCceEEEECCCCCeEEE-EEeC
Confidence 543221122233445555555555433332222211 1233333322 23345667766 899999976555 6777
Q ss_pred cCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeecc-
Q 022870 171 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK- 249 (291)
Q Consensus 171 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~- 249 (291)
|++|++||.+++++...+. +|. ..+.+++ |+|+ |+ +|++|+.|+.|++||+.+ ++.+..+.
T Consensus 169 D~~v~lwd~~~~~~~~~l~--------~H~----~~V~~v~-fspd---g~-~las~s~D~~i~lwd~~~-g~~~~~~~~ 230 (611)
T 1nr0_A 169 DNTVAIFEGPPFKFKSTFG--------EHT----KFVHSVR-YNPD---GS-LFASTGGDGTIVLYNGVD-GTKTGVFED 230 (611)
T ss_dssp TSCEEEEETTTBEEEEEEC--------CCS----SCEEEEE-ECTT---SS-EEEEEETTSCEEEEETTT-CCEEEECBC
T ss_pred CCeEEEEECCCCeEeeeec--------ccc----CceEEEE-ECCC---CC-EEEEEECCCcEEEEECCC-CcEeeeecc
Confidence 9999999999988888887 674 4677887 9998 44 999999999999999988 77777763
Q ss_pred ------ccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 250 ------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 250 ------~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+|.+.|.+++|+|++++|++++.|++|++||+++++.+.++
T Consensus 231 ~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 231 DSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTI 277 (611)
T ss_dssp TTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeee
Confidence 79999999999999999999999999999999998877643
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-36 Score=244.77 Aligned_cols=238 Identities=22% Similarity=0.371 Sum_probs=182.6
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCC
Q 022870 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLS 99 (291)
Q Consensus 20 ~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 99 (291)
.|++++|+|++++|++|+.|++|++||+.+++.+..+.+|... |.+++|+| ++.+|++++.|++|++||+++++..
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~--v~~~~~~p--~~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQD--IYSLDYFP--SGDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC--EEEEEECT--TSSEEEEEETTSEEEEEETTTTEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCC--EEEEEEcC--CCCEEEEecCCCcEEEEECCCCeeE
Confidence 4999999999999999999999999999999999999999855 99999999 9999999999999999999987643
Q ss_pred CCCccccccceEEEEEeecccCccceeccCCCCceeeecccCcccccc------CCCCCC----cccCCCCCcEEEEecC
Q 022870 100 SNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTD------SLCDSK----DDVPAEGPKYMAVAGE 169 (291)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~----~~~~~~~~~~~~~~g~ 169 (291)
. .+.. ........+.+............+...+|++......... ..+|.. ++|+|++..++ +|+
T Consensus 201 ~--~~~~-~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~--s~s 275 (393)
T 1erj_A 201 L--TLSI-EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV--SGS 275 (393)
T ss_dssp E--EEEC-SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEE--EEE
T ss_pred E--EEEc-CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEE--EEe
Confidence 2 1111 1223333333322233344455667788887765533221 134554 89999997654 677
Q ss_pred CcCeEEEEeCCCcce------------eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEE
Q 022870 170 QLSEVEIWDLNTAER------------CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (291)
Q Consensus 170 ~d~~i~~wd~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (291)
.|+.|++||+++... ...+. +| ...+.++. |+|+ ++ +|++|+.||.|++||
T Consensus 276 ~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~--------~h----~~~v~~~~-~~~~---~~-~l~sgs~D~~v~iwd 338 (393)
T 1erj_A 276 LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI--------GH----KDFVLSVA-TTQN---DE-YILSGSKDRGVLFWD 338 (393)
T ss_dssp TTSEEEEEEC---------------CEEEEEE--------CC----SSCEEEEE-ECGG---GC-EEEEEETTSEEEEEE
T ss_pred CCCEEEEEECCCCCCcccccCCCCCcceEEEe--------cc----cCcEEEEE-ECCC---CC-EEEEEeCCCeEEEEE
Confidence 799999999986432 23333 45 34577776 9998 44 999999999999999
Q ss_pred ccCCCCceeeccccccceeEEEeec------CCCeeEEecCCCeEEEEEcCCC
Q 022870 238 IRNPGIPLTAMKVHLEPVLCLSIDE------SCNGGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 238 ~~~~~~~~~~~~~h~~~v~~~~~~~------~~~~l~s~s~dg~i~vw~~~~~ 284 (291)
+++ ++++..+.+|...|.+++|++ ++++|++|+.||+|++|+++..
T Consensus 339 ~~~-~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 339 KKS-GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp TTT-CCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CCC-CeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 998 889999999999999999865 6889999999999999998654
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=241.79 Aligned_cols=256 Identities=14% Similarity=0.173 Sum_probs=185.0
Q ss_pred CceEEecCCcc-ceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEE---EeeecCCcceEEEEEeecCCCCeEEEEeC
Q 022870 9 DPVAVLRGHRA-SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSS---SWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (291)
Q Consensus 9 ~~~~~l~~h~~-~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (291)
+++.++.+|.+ .|++++|+|+|++||+|+.|++|+|||++++..... ..+|. ..|.+++|+| ++++|++|+.
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~--~~v~~~~~sp--~g~~l~s~s~ 81 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQ--RTVRKVAWSP--CGNYLASASF 81 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCS--SCEEEEEECT--TSSEEEEEET
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccC--CcEEEEEECC--CCCEEEEEEC
Confidence 56788999988 999999999999999999999999999988764322 24566 4599999999 9999999999
Q ss_pred CCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCcc--ccccCCCCCC----cccCC
Q 022870 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGET--VDTDSLCDSK----DDVPA 158 (291)
Q Consensus 85 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~ 158 (291)
|++|++||+..........+..+........+++... ........+...+|++..... ....+.+|.. ++|+|
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p 160 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP 160 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS
T ss_pred CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC
Confidence 9999999998764321112223334455555555432 223344456778888865532 2334556655 89999
Q ss_pred CCCcEEEEecCCcCeEEEEeCCCcce--eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEE
Q 022870 159 EGPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 236 (291)
Q Consensus 159 ~~~~~~~~~g~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vw 236 (291)
++..++ +|+.|+.|++||.++++. ...+. +| ...+.++. |+|+ |+ +|++|+.||.|++|
T Consensus 161 ~~~~l~--s~s~d~~i~~w~~~~~~~~~~~~~~--------~h----~~~v~~l~-~sp~---g~-~l~s~s~D~~v~iW 221 (345)
T 3fm0_A 161 SQELLA--SASYDDTVKLYREEEDDWVCCATLE--------GH----ESTVWSLA-FDPS---GQ-RLASCSDDRTVRIW 221 (345)
T ss_dssp SSSCEE--EEETTSCEEEEEEETTEEEEEEEEC--------CC----SSCEEEEE-ECTT---SS-EEEEEETTSCEEEE
T ss_pred CCCEEE--EEeCCCcEEEEEecCCCEEEEEEec--------CC----CCceEEEE-ECCC---CC-EEEEEeCCCeEEEe
Confidence 997655 677799999999988753 34555 56 34677787 9998 44 89999999999999
Q ss_pred EccCCCC-------------------------------------------------------------c-----eeeccc
Q 022870 237 DIRNPGI-------------------------------------------------------------P-----LTAMKV 250 (291)
Q Consensus 237 d~~~~~~-------------------------------------------------------------~-----~~~~~~ 250 (291)
|...++. + .....+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~ 301 (345)
T 3fm0_A 222 RQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQA 301 (345)
T ss_dssp EEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTS
T ss_pred ccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeeccc
Confidence 8632110 0 011246
Q ss_pred cccceeEEEeecCC-CeeEEecCCCeEEEEEcCCCceee
Q 022870 251 HLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 251 h~~~v~~~~~~~~~-~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
|...|++++|+|++ .+||+||.||.|++|++++++.+.
T Consensus 302 h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~ 340 (345)
T 3fm0_A 302 HSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLH 340 (345)
T ss_dssp SSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-----
T ss_pred ccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcc
Confidence 88899999999987 489999999999999999887654
No 24
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.8e-36 Score=242.59 Aligned_cols=253 Identities=13% Similarity=0.152 Sum_probs=182.9
Q ss_pred ecCCccceeEEEEcCCCCEEEEecC------CCeEEEEeCCCCeEE----EEEeeecCCcceEEEEEeecCCCCeEEEEe
Q 022870 14 LRGHRASVTDVCFHQTKPILFAGTT------GGELRIWDTVQHRTV----SSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (291)
Q Consensus 14 l~~h~~~v~~l~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~ 83 (291)
...|+..|++++|+|||++|++|+. |+.|++|+..++... .....|. ..|.+++|+| + ..+++++
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~--~~V~~~~~s~--d-~~~l~~s 112 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTE--AGVTDVAWVS--E-KGILVAS 112 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECS--SCEEEEEEET--T-TEEEEEE
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCC--CCEEEEEEcC--C-CCEEEEE
Confidence 3579999999999999999999997 788999998776432 2233455 4499999999 7 4677788
Q ss_pred CCCeEEEEECCCCCCCCCCcccc--ccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccC
Q 022870 84 RDGTVKCWDIENGGLSSNPSLTI--KTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVP 157 (291)
Q Consensus 84 ~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 157 (291)
.||+|++||+.+++......... +........+++.... .......+...+|++....... .+.+|.. ++|+
T Consensus 113 ~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~-l~sgs~dg~v~iwd~~~~~~~~-~~~~h~~~v~~v~~s 190 (357)
T 4g56_B 113 DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQ-AVSGGKDFSVKVWDLSQKAVLK-SYNAHSSEVNCVAAC 190 (357)
T ss_dssp TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTTEEEE-EECCCSSCEEEEEEC
T ss_pred CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCE-EEEEeCCCeEEEEECCCCcEEE-EEcCCCCCEEEEEEc
Confidence 99999999999876543222222 2334444445443322 2334455667888887665433 3455655 8899
Q ss_pred CCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEE
Q 022870 158 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (291)
Q Consensus 158 ~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (291)
|++..+++ +++.|+.|++||++++++...+.. + .....+.++. |+|++ +. +|++|+.|+.|++||
T Consensus 191 ~~~~~~~~-s~~~dg~v~~wd~~~~~~~~~~~~--------~--~~~~~v~~v~-~sp~~--~~-~la~g~~d~~i~~wd 255 (357)
T 4g56_B 191 PGKDTIFL-SCGEDGRILLWDTRKPKPATRIDF--------C--ASDTIPTSVT-WHPEK--DD-TFACGDETGNVSLVN 255 (357)
T ss_dssp TTCSSCEE-EEETTSCEEECCTTSSSCBCBCCC--------T--TCCSCEEEEE-ECTTS--TT-EEEEEESSSCEEEEE
T ss_pred cCCCceee-eeccCCceEEEECCCCceeeeeee--------c--cccccccchh-hhhcc--cc-eEEEeecccceeEEE
Confidence 99887666 455699999999999887766542 1 1244577787 99983 33 899999999999999
Q ss_pred ccCCCCceeeccccccceeEEEeecCC-CeeEEecCCCeEEEEEcCCCceeee
Q 022870 238 IRNPGIPLTAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 238 ~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
+++ ++++..+.+|...|++++|+|++ ++|++|+.|++|+|||++++++++.
T Consensus 256 ~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 256 IKN-PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp SSC-GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE
T ss_pred CCC-CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE
Confidence 998 88899999999999999999987 5789999999999999999988764
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.3e-36 Score=255.16 Aligned_cols=259 Identities=13% Similarity=0.154 Sum_probs=196.8
Q ss_pred CCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCC--eEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC
Q 022870 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH--RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (291)
Q Consensus 8 ~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (291)
++...++.+|.+.|++++|+|+|++||+|+.||+|+|||+.++ .....+..|... |.+++|+| ++.+|++++.+
T Consensus 49 ~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~--v~~v~fs~--dg~~l~~~~~~ 124 (611)
T 1nr0_A 49 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGP--VKDISWDS--ESKRIAAVGEG 124 (611)
T ss_dssp SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSC--EEEEEECT--TSCEEEEEECC
T ss_pred cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCc--eEEEEECC--CCCEEEEEECC
Confidence 4677889999999999999999999999999999999998654 345567777754 99999999 99999988865
Q ss_pred ----CeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccC
Q 022870 86 ----GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVP 157 (291)
Q Consensus 86 ----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 157 (291)
+.|++||.. +... .+..+........+++................+|+....+. ...+.+|.. ++|+
T Consensus 125 ~~~~~~v~~wd~~--~~~~--~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~-~~~l~~H~~~V~~v~fs 199 (611)
T 1nr0_A 125 RERFGHVFLFDTG--TSNG--NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKF-KSTFGEHTKFVHSVRYN 199 (611)
T ss_dssp SSCSEEEEETTTC--CBCB--CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEE-EEEECCCSSCEEEEEEC
T ss_pred CCceeEEEEeeCC--CCcc--eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeE-eeeeccccCceEEEEEC
Confidence 478888853 2222 23344445556666555433344555667778888765543 334667766 8999
Q ss_pred CCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEE
Q 022870 158 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (291)
Q Consensus 158 ~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (291)
|+++.++ +|+.|+.|++||+.+++....+.... ....+| ...+.++. |+|+ |+ +|++|+.|+.|++||
T Consensus 200 pdg~~la--s~s~D~~i~lwd~~~g~~~~~~~~~~-~~~~~h----~~~V~~v~-~spd---g~-~l~s~s~D~~v~lWd 267 (611)
T 1nr0_A 200 PDGSLFA--STGGDGTIVLYNGVDGTKTGVFEDDS-LKNVAH----SGSVFGLT-WSPD---GT-KIASASADKTIKIWN 267 (611)
T ss_dssp TTSSEEE--EEETTSCEEEEETTTCCEEEECBCTT-SSSCSS----SSCEEEEE-ECTT---SS-EEEEEETTSEEEEEE
T ss_pred CCCCEEE--EEECCCcEEEEECCCCcEeeeecccc-cccccc----CCCEEEEE-ECCC---CC-EEEEEeCCCeEEEEe
Confidence 9997544 67779999999999998887764210 000123 55788887 9998 44 899999999999999
Q ss_pred ccCCCCce-------------------------------------------eeccccccceeEEEeecCCCeeEEecCCC
Q 022870 238 IRNPGIPL-------------------------------------------TAMKVHLEPVLCLSIDESCNGGISGGADQ 274 (291)
Q Consensus 238 ~~~~~~~~-------------------------------------------~~~~~h~~~v~~~~~~~~~~~l~s~s~dg 274 (291)
+++ ++.+ ..+.+|...|++++|+|++++|++++.|+
T Consensus 268 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~ 346 (611)
T 1nr0_A 268 VAT-LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEG 346 (611)
T ss_dssp TTT-TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCC-CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 986 4332 23457999999999999999999999999
Q ss_pred eEEEEEcCCCceee
Q 022870 275 KIVLYNLDHSTVSH 288 (291)
Q Consensus 275 ~i~vw~~~~~~~~~ 288 (291)
.|++||+++++...
T Consensus 347 ~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 347 HINSWDISTGISNR 360 (611)
T ss_dssp CEEEEETTTCCEEE
T ss_pred cEEEEECCCCceee
Confidence 99999999887654
No 26
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=240.22 Aligned_cols=249 Identities=9% Similarity=0.101 Sum_probs=183.5
Q ss_pred cCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCC------------CeEEEEEeeecCCcceEEEEEeecCCCCeEEEE
Q 022870 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ------------HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (291)
Q Consensus 15 ~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~ 82 (291)
..|...|.+++|+|||++|++++ |+++++||... +.....+ .+. .+|.+++|+| + +.|++|
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~-~~~--~~v~~~~~s~--d-~~l~~~ 99 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGV-QTE--AGVADLTWVG--E-RGILVA 99 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEE-EES--SCEEEEEEET--T-TEEEEE
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeee-ccC--CCEEEEEEeC--C-CeEEEE
Confidence 35778899999999999999887 66778886210 1111111 233 4599999999 7 688999
Q ss_pred eCCCeEEEEECCCCCCCCCCccc--cccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----ccc
Q 022870 83 GRDGTVKCWDIENGGLSSNPSLT--IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDV 156 (291)
Q Consensus 83 ~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 156 (291)
+.||+|++||+++++........ .+........+++.... .......+...+|++...... ..+.+|.. ++|
T Consensus 100 s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~-l~sgs~d~~i~iwd~~~~~~~-~~~~~h~~~V~~~~~ 177 (344)
T 4gqb_B 100 SDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQ-AVSGSKDICIKVWDLAQQVVL-SSYRAHAAQVTCVAA 177 (344)
T ss_dssp ETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEE
T ss_pred ECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCE-EEEEeCCCeEEEEECCCCcEE-EEEcCcCCceEEEEe
Confidence 99999999999988754311111 22334444555544322 233445567888888776543 34566766 899
Q ss_pred CCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEE
Q 022870 157 PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 236 (291)
Q Consensus 157 ~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vw 236 (291)
+|++..+++ +++.|+.|++||++++++...+... . ....+.++. |+|++ ++ +|++|+.||.|++|
T Consensus 178 ~~~~~~~l~-s~s~D~~v~iwd~~~~~~~~~~~~~------~----~~~~~~~~~-~~p~~--~~-~l~sg~~dg~v~~w 242 (344)
T 4gqb_B 178 SPHKDSVFL-SCSEDNRILLWDTRCPKPASQIGCS------A----PGYLPTSLA-WHPQQ--SE-VFVFGDENGTVSLV 242 (344)
T ss_dssp CSSCTTEEE-EEETTSCEEEEETTSSSCEEECC--------------CCCEEEEE-ECSSC--TT-EEEEEETTSEEEEE
T ss_pred cCCCCCcee-eeccccccccccccccceeeeeecc------e----eeccceeee-ecCCC--Cc-ceEEeccCCcEEEE
Confidence 999988776 5667999999999999988877521 1 123466776 99973 33 89999999999999
Q ss_pred EccCCCCceeeccccccceeEEEeecCC-CeeEEecCCCeEEEEEcCCCceee
Q 022870 237 DIRNPGIPLTAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 237 d~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
|+++ ++++..+.+|...|++++|+|++ ++|++|+.|++|+|||+++++++.
T Consensus 243 d~~~-~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 243 DTKS-TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR 294 (344)
T ss_dssp ESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE
T ss_pred ECCC-CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE
Confidence 9998 88999999999999999999997 578999999999999999988764
No 27
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.1e-35 Score=239.92 Aligned_cols=250 Identities=14% Similarity=0.216 Sum_probs=188.8
Q ss_pred CceEE--ecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC
Q 022870 9 DPVAV--LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (291)
Q Consensus 9 ~~~~~--l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (291)
+.... +.+|...|++++|+|+|++|++|+.||+|+|||+++++++..+.+|... +.++++++ ..|++|+.|+
T Consensus 136 ~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~--v~~~s~~~----~~l~sgs~d~ 209 (420)
T 4gga_A 136 DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSAR--VGSLSWNS----YILSSGSRSG 209 (420)
T ss_dssp CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC--EEEEEEET----TEEEEEETTS
T ss_pred CEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCc--eEEEeeCC----CEEEEEeCCC
Confidence 44444 4578889999999999999999999999999999999999999999855 99888765 7999999999
Q ss_pred eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccc---cccCCCCCC----cccCCC
Q 022870 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETV---DTDSLCDSK----DDVPAE 159 (291)
Q Consensus 87 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~ 159 (291)
.+++||......... .+..+........+.+... ........+...+|+....... ......|.. ++|+|.
T Consensus 210 ~i~~~d~~~~~~~~~-~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~ 287 (420)
T 4gga_A 210 HIHHHDVRVAEHHVA-TLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPW 287 (420)
T ss_dssp EEEEEETTSSSCEEE-EEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTT
T ss_pred ceeEeeecccceeeE-EecccccceeeeeecCCCC-eeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCC
Confidence 999999887543210 1122222333333333222 2233344456667776654422 222334443 889999
Q ss_pred CCcEEEE-ecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEe--ecCCCcEEEE
Q 022870 160 GPKYMAV-AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA--GYEDGSILVW 236 (291)
Q Consensus 160 ~~~~~~~-~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~--g~~dg~i~vw 236 (291)
+..++++ +|+.|+.|++||++++++...+. .+ ..+.++. |+|++ . .+++ |+.||.|+||
T Consensus 288 ~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~--------~~-----~~v~~~~-~~~~~---~-~lv~~sg~~d~~I~iw 349 (420)
T 4gga_A 288 QSNVLATGGGTSDRHIRIWNVCSGACLSAVD--------AH-----SQVCSIL-WSPHY---K-ELISGHGFAQNQLVIW 349 (420)
T ss_dssp CTTEEEEEECTTTCEEEEEETTTTEEEEEEE--------CS-----SCEEEEE-EETTT---T-EEEEEECTTTCCEEEE
T ss_pred cccEEEEEeecCCCEEEEEeCCccccceeec--------cc-----cceeeee-ecCCC---C-eEEEEEecCCCEEEEE
Confidence 8888765 46789999999999999888887 23 3456665 99873 3 4444 4589999999
Q ss_pred EccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCc
Q 022870 237 DIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 237 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~ 285 (291)
|+.+ ++++..+.+|.+.|++++|+|+|.+|+|||.|++|+|||+....
T Consensus 350 d~~~-~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 350 KYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp ETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred ECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 9998 89999999999999999999999999999999999999987643
No 28
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=234.28 Aligned_cols=266 Identities=15% Similarity=0.145 Sum_probs=180.2
Q ss_pred CCCCCCceEEecC--Ccc--ceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeE
Q 022870 4 RPPPPDPVAVLRG--HRA--SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV 79 (291)
Q Consensus 4 ~~~~~~~~~~l~~--h~~--~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 79 (291)
+..|..|.++|.+ ..+ -.++|+||+++ +||+| .|++|+|||+++++++..+..+.+...|.+++|+| ++++|
T Consensus 7 r~~p~~p~rvldap~~~~d~y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~--~~~~l 82 (318)
T 4ggc_A 7 RYIPSLPDRILDAPEIRNDYYLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK--EGNYL 82 (318)
T ss_dssp CCCCSSCSEEEECTTCCCCTTCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT--TSSEE
T ss_pred cccCCCCCEEeeCCCCcccccceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECC--CCCEE
Confidence 4466777788864 233 25789999986 77766 58999999999999998887766556799999999 99999
Q ss_pred EEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cc
Q 022870 80 ISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DD 155 (291)
Q Consensus 80 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 155 (291)
++|+.||+|++||+++++... ....+......+..... .............+...........+.+|.. ++
T Consensus 83 ~sgs~Dg~v~iw~~~~~~~~~----~~~~h~~~~~~~~~~~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (318)
T 4ggc_A 83 AVGTSSAEVQLWDVQQQKRLR----NMTSHSARVGSLSWNSY-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLR 157 (318)
T ss_dssp EEEETTSEEEEEETTTTEEEE----EEECCSSCEEEEEEETT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEE
T ss_pred EEEECCCcEEEeecCCceeEE----EecCccceEEEeecCCC-EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEE
Confidence 999999999999999887543 22222222222222221 1222233334444555544444445555555 78
Q ss_pred cCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccc-----------cCCCC--------CCC----------------
Q 022870 156 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNS-----------CGGSP--------NFS---------------- 200 (291)
Q Consensus 156 ~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~-----------~~~~~--------~~~---------------- 200 (291)
+++++..++ +++.|+.|++||+++++......... ..+.. +..
T Consensus 158 ~~~~~~~l~--s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~ 235 (318)
T 4ggc_A 158 WAPDGRHLA--SGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS 235 (318)
T ss_dssp ECTTSSEEE--EEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEE
T ss_pred EcCCCCEEE--EEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccc
Confidence 889987655 66779999999998765321110000 00000 000
Q ss_pred -CCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEE
Q 022870 201 -SKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279 (291)
Q Consensus 201 -~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw 279 (291)
......+..+. |.|.+. ..++++|+.|+.|++||+++ ++++..+.+|.+.|++++|+|++++|+|||.||+|+||
T Consensus 236 ~~~~~~~v~~~~-~~~~~~--~~~~~sg~~d~~i~iwd~~~-~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iW 311 (318)
T 4ggc_A 236 AVDAHSQVCSIL-WSPHYK--ELISGHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW 311 (318)
T ss_dssp EEECSSCEEEEE-EETTTT--EEEEEECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEE
T ss_pred cccceeeeeeee-eccccc--ceEEEEEcCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEE
Confidence 00011234444 777632 21233456899999999998 89999999999999999999999999999999999999
Q ss_pred EcCCC
Q 022870 280 NLDHS 284 (291)
Q Consensus 280 ~~~~~ 284 (291)
|+.+.
T Consensus 312 d~~~~ 316 (318)
T 4ggc_A 312 RCFEL 316 (318)
T ss_dssp CCSCC
T ss_pred ECCCC
Confidence 99764
No 29
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-35 Score=235.07 Aligned_cols=249 Identities=14% Similarity=0.154 Sum_probs=192.2
Q ss_pred eEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEE
Q 022870 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~i 90 (291)
...+.+|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+..|... |.+++|+| ++++|++++.||.|++
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGT--IWSIDVDC--FTKYCVTGSADYSIKL 100 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSC--EEEEEECT--TSSEEEEEETTTEEEE
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCc--EEEEEEcC--CCCEEEEEeCCCeEEE
Confidence 4568899999999999999999999999999999999999999999988855 99999999 9999999999999999
Q ss_pred EECCCCCCCCCCccccccceEEEEEeecc---------------------------------------------------
Q 022870 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLV--------------------------------------------------- 119 (291)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------- 119 (291)
||+.+++.... +. .........+.+.
T Consensus 101 wd~~~~~~~~~--~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (369)
T 3zwl_B 101 WDVSNGQCVAT--WK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA 177 (369)
T ss_dssp EETTTCCEEEE--EE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred EECCCCcEEEE--ee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccc
Confidence 99988765331 11 0111111111110
Q ss_pred -----cCcc---ceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeE
Q 022870 120 -----KEPY---ANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTR 187 (291)
Q Consensus 120 -----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~ 187 (291)
..+. .......+...+|++.........+..|.. ++|+|++..++ +++.|+.|++||+++++.+..
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~--~~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFI--TSSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEE--EEETTSEEEEEETTTCCEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEE--EecCCceEEEEECCCCceeee
Confidence 0011 112223344566676663333444444544 89999987655 566689999999999998888
Q ss_pred ecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCC--------------cEEEEEccCCCCceeecccccc
Q 022870 188 LHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG--------------SILVWDIRNPGIPLTAMKVHLE 253 (291)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg--------------~i~vwd~~~~~~~~~~~~~h~~ 253 (291)
+.. ...+..+. |+|+ ++ ++++++.++ .+++||+.+ ++++..+.+|..
T Consensus 256 ~~~-------------~~~~~~~~-~~~~---~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~ 316 (369)
T 3zwl_B 256 YET-------------DCPLNTAV-ITPL---KE-FIILGGGQEAKDVTTTSANEGKFEARFYHKIF-EEEIGRVQGHFG 316 (369)
T ss_dssp EEC-------------SSCEEEEE-ECSS---SS-EEEEEECCC-------------CEEEEEETTT-CCEEEEEECCSS
T ss_pred ecC-------------CCCceeEE-ecCC---Cc-eEEEeecCCCceEEEEecCCCcceeEEEecCC-CcchhheecccC
Confidence 762 33566776 9998 44 888888887 899999998 889999999999
Q ss_pred ceeEEEeecCCCeeEEecCCCeEEEEEcCCCcee
Q 022870 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTVS 287 (291)
Q Consensus 254 ~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~ 287 (291)
.|++++|+|++++|++++.||.|++|+++++.+.
T Consensus 317 ~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 350 (369)
T 3zwl_B 317 PLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFD 350 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEECHHHHT
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEECccccch
Confidence 9999999999999999999999999999876554
No 30
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.5e-35 Score=233.98 Aligned_cols=264 Identities=15% Similarity=0.130 Sum_probs=191.5
Q ss_pred ceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCC----eEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC
Q 022870 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH----RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (291)
Q Consensus 10 ~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (291)
....+.+|.+.|++++|+|++++|++|+.||.|++||+.++ +....+..|... |.+++|+|..++++|++++.|
T Consensus 3 ~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 3 MQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSS--IVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp CCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSC--EEEEEECCGGGCSEEEEEETT
T ss_pred ccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCc--EEEEEEcCCCCCCEEEEEcCC
Confidence 34567899999999999999999999999999999999876 466677778755 999999984337899999999
Q ss_pred CeEEEEECCCCCCCC-----CCcccc--ccceEEEEEeeccc-CccceeccCCCCceeeecccCcccccc----------
Q 022870 86 GTVKCWDIENGGLSS-----NPSLTI--KTNSYHFCKLSLVK-EPYANAKQANEPKDCYEREVGETVDTD---------- 147 (291)
Q Consensus 86 g~i~iwd~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 147 (291)
|.|++||+++++... ++...+ +........+.+.. ..........+...+|++.........
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 999999998764321 111222 22333444444331 222333445566778887665432211
Q ss_pred --CCCCCC----cccCCC---CCcEEEEecCCcCeEEEEeCCCcce--eeEecccccCCCCCCCCCcceeeeeEEEecCC
Q 022870 148 --SLCDSK----DDVPAE---GPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPS 216 (291)
Q Consensus 148 --~~~~~~----~~~~~~---~~~~~~~~g~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 216 (291)
...+.. ++|+|+ +. +++ +++.|+.+.+|+...++. +..+. +| ...+.++. |+|+
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~-~l~-~~~~~~~~~~~~~~~~~~~~~~~~~--------~h----~~~i~~~~-~~p~ 225 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPE-KLA-VSALEQAIIYQRGKDGKLHVAAKLP--------GH----KSLIRSIS-WAPS 225 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCC-EEE-EEETTEEEEEEECTTSCEEEEEECC--------CC----CSCEEEEE-ECCC
T ss_pred cccCCcccceeEEEeccCCCCCc-EEE-EecCCCcEEEEccCCCceeeeeecC--------CC----CcceeEEE-ECCC
Confidence 112222 888887 54 444 455689998888877765 44444 45 44677887 9998
Q ss_pred CCCCceEEEeecCCCcEEEEEccCCC---------------------------------------------Cceeecccc
Q 022870 217 KSQGFVNVLAGYEDGSILVWDIRNPG---------------------------------------------IPLTAMKVH 251 (291)
Q Consensus 217 ~~~g~~~l~~g~~dg~i~vwd~~~~~---------------------------------------------~~~~~~~~h 251 (291)
+.....+|++|+.||.|++||+++.. +++..+.+|
T Consensus 226 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 305 (351)
T 3f3f_A 226 IGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDH 305 (351)
T ss_dssp SSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTT
T ss_pred CCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecc
Confidence 42111289999999999999998621 456678889
Q ss_pred ccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 252 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 252 ~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
...|++++|+|++++|++++.||.|++|++++++.+.++
T Consensus 306 ~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 306 NGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp SSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred cccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 999999999999999999999999999999998776654
No 31
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-36 Score=242.94 Aligned_cols=259 Identities=16% Similarity=0.162 Sum_probs=188.3
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCC--CCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (291)
+++.++++|.+.|++++|+|++++|++|+.||.|++||+. +++.+..+..|... |.+++|++..++++|++++.||
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGP--VWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC--EEEEEECCGGGCSEEEEEETTS
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCc--EEEEEeCCCCCCCEEEEeccCC
Confidence 5677899999999999999999999999999999999997 55677778888755 9999999822289999999999
Q ss_pred eEEEEECCCCCCCCCCccccccceEEEEEeeccc-CccceeccCCCCceeeecccCcc-ccccCCCCCC----cccCC--
Q 022870 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK-EPYANAKQANEPKDCYEREVGET-VDTDSLCDSK----DDVPA-- 158 (291)
Q Consensus 87 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~-- 158 (291)
.|++||+++++.........+........+.+.. ..........+...+|++..... ....+..|.. ++|+|
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 9999999987521111222233344444444442 22334445566778888876632 2223344544 88999
Q ss_pred -----------CCCcEEEEecCCcCeEEEEeCCCccee----eEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceE
Q 022870 159 -----------EGPKYMAVAGEQLSEVEIWDLNTAERC----TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVN 223 (291)
Q Consensus 159 -----------~~~~~~~~~g~~d~~i~~wd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~ 223 (291)
++.. ++ +|+.|+.|++||+++++.. ..+. +| ...+.++. |+|++..+. +
T Consensus 160 ~~~~~~~~~~~~~~~-l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~--------~h----~~~v~~~~-~sp~~~~~~-~ 223 (379)
T 3jrp_A 160 IEEDGEHNGTKESRK-FV-TGGADNLVKIWKYNSDAQTYVLESTLE--------GH----SDWVRDVA-WSPTVLLRS-Y 223 (379)
T ss_dssp ----------CTTCE-EE-EEETTSCEEEEEEETTTTEEEEEEEEC--------CC----SSCEEEEE-ECCCCSSSE-E
T ss_pred ccccccccCCCCCCE-EE-EEeCCCeEEEEEecCCCcceeeEEEEe--------cc----cCcEeEEE-ECCCCCCCC-e
Confidence 4554 44 5667999999999876533 3344 44 44677887 999831123 9
Q ss_pred EEeecCCCcEEEEEccCCCC----ceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCc
Q 022870 224 VLAGYEDGSILVWDIRNPGI----PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 224 l~~g~~dg~i~vwd~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~ 285 (291)
|++++.||.|++||+++... .+.....|...|++++|+|++++|++++.||.|++|+++.+.
T Consensus 224 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 224 LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp EEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred EEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 99999999999999997321 223334588899999999999999999999999999998543
No 32
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.9e-35 Score=237.36 Aligned_cols=256 Identities=20% Similarity=0.254 Sum_probs=188.0
Q ss_pred CCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecC----------------CcceEEEEEeecCCCCeE
Q 022870 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA----------------AHGIVSVATGPSIGLNKV 79 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~~l 79 (291)
+|.+.|++++|+|+|++|++|+ |+.+++|++.+++.+..+..+.. ...|.+++|+| ++++|
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~--dg~~l 138 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP--DGKFL 138 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT--TSSEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC--CCCEE
Confidence 6999999999999999999987 68999999999998887765431 12389999999 99999
Q ss_pred EEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC---ccc
Q 022870 80 ISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK---DDV 156 (291)
Q Consensus 80 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 156 (291)
++|+.|++|++||+++++... .+..+........+.+.... .......+...+|++.......... .+.. ++|
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~--~~~~h~~~v~~~~~~p~~~~-l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~ 214 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVM--ILQGHEQDIYSLDYFPSGDK-LVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAV 214 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEE--EECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEE
T ss_pred EEEcCCCeEEEEECCCCcEEE--EEccCCCCEEEEEEcCCCCE-EEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEE
Confidence 999999999999999876533 22333444444555444332 2334445667788887665433221 2222 889
Q ss_pred CC-CCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEE
Q 022870 157 PA-EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 235 (291)
Q Consensus 157 ~~-~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~v 235 (291)
+| ++. +++ +|+.|+.|++||+++++.+..+.... ....+| ...+.++. |+|+ |+ +|++|+.||.|++
T Consensus 215 ~~~~~~-~l~-~~s~d~~v~iwd~~~~~~~~~~~~~~-~~~~~h----~~~v~~v~-~~~~---g~-~l~s~s~d~~v~~ 282 (393)
T 1erj_A 215 SPGDGK-YIA-AGSLDRAVRVWDSETGFLVERLDSEN-ESGTGH----KDSVYSVV-FTRD---GQ-SVVSGSLDRSVKL 282 (393)
T ss_dssp CSTTCC-EEE-EEETTSCEEEEETTTCCEEEEEC-------CCC----SSCEEEEE-ECTT---SS-EEEEEETTSEEEE
T ss_pred ECCCCC-EEE-EEcCCCcEEEEECCCCcEEEeecccc-cCCCCC----CCCEEEEE-ECCC---CC-EEEEEeCCCEEEE
Confidence 99 554 444 56779999999999998877764210 000133 45678887 9998 44 8999999999999
Q ss_pred EEccCC-----------CCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 236 WDIRNP-----------GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 236 wd~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
||+++. +.+...+.+|...|.+++|++++.+|++|+.||.|++||+++++.+..+
T Consensus 283 wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l 348 (393)
T 1erj_A 283 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML 348 (393)
T ss_dssp EEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEE
Confidence 999752 2345567889999999999999999999999999999999998876543
No 33
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.2e-36 Score=246.85 Aligned_cols=219 Identities=14% Similarity=0.170 Sum_probs=165.8
Q ss_pred CceEEecCCccceeEEEEcC-CCCEEEEecCCCeEEEEeCCCCeEEEE--EeeecCCcceEEEEEeecCCCCeEEEEeCC
Q 022870 9 DPVAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSS--SWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (291)
+......+|...|+||+|+| ++.+||+|+.||+|+|||+.+++.... +.+|. .+|++|+|+|. ++++|++|+.|
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~--~~V~~l~f~p~-~~~~l~s~s~D 186 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAG--GSITGLKFNPL-NTNQFYASSME 186 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSS--CCCCEEEECSS-CTTEEEEECSS
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCC--CCEEEEEEeCC-CCCEEEEEeCC
Confidence 34556778999999999999 677999999999999999987764444 44566 45999999984 56899999999
Q ss_pred CeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEE
Q 022870 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (291)
Q Consensus 86 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
|+|++||+++..... .......... ...++|+|++..++
T Consensus 187 ~~v~iwd~~~~~~~~--~~~~~~~~~~--------------------------------------~~~~~~~~~~~~l~- 225 (435)
T 4e54_B 187 GTTRLQDFKGNILRV--FASSDTINIW--------------------------------------FCSLDVSASSRMVV- 225 (435)
T ss_dssp SCEEEEETTSCEEEE--EECCSSCSCC--------------------------------------CCCEEEETTTTEEE-
T ss_pred CEEEEeeccCCceeE--EeccCCCCcc--------------------------------------EEEEEECCCCCEEE-
Confidence 999999997653210 0000000000 00056889987554
Q ss_pred EecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCce
Q 022870 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 245 (291)
Q Consensus 166 ~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~ 245 (291)
+|+.||.|++||++. +.+..+. +| ...+.++. |+|++ ..+|++|+.|+.|++||+++ .+..
T Consensus 226 -~g~~dg~i~~wd~~~-~~~~~~~--------~h----~~~v~~v~-~~p~~---~~~~~s~s~d~~v~iwd~~~-~~~~ 286 (435)
T 4e54_B 226 -TGDNVGNVILLNMDG-KELWNLR--------MH----KKKVTHVA-LNPCC---DWFLATASVDQTVKIWDLRQ-VRGK 286 (435)
T ss_dssp -EECSSSBEEEEESSS-CBCCCSB--------CC----SSCEEEEE-ECTTC---SSEEEEEETTSBCCEEETTT-CCSS
T ss_pred -EEeCCCcEeeeccCc-ceeEEEe--------cc----cceEEeee-ecCCC---ceEEEEecCcceeeEEeccc-cccc
Confidence 677899999999975 4455555 56 34577787 99983 33899999999999999987 4333
Q ss_pred ---eeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 246 ---TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 246 ---~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
....+|...|++++|+|++.+|++++.||.|++||+.+++....+
T Consensus 287 ~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 287 ASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGL 334 (435)
T ss_dssp SCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEE
T ss_pred ceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEE
Confidence 334679999999999999999999999999999999988766543
No 34
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-35 Score=232.33 Aligned_cols=252 Identities=14% Similarity=0.160 Sum_probs=173.5
Q ss_pred ceEEe-cC-CccceeEEEEcCCCCEEEEecCCCeEEEEeCCC-------CeEEEEEeeecCCcceEEEEEeecCCCCeEE
Q 022870 10 PVAVL-RG-HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-------HRTVSSSWVHSAAHGIVSVATGPSIGLNKVI 80 (291)
Q Consensus 10 ~~~~l-~~-h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 80 (291)
....+ .+ |.+.|++++|+|++++|++|+.|++|++||++. .+++..+.+|... |.+++|+| ++++|+
T Consensus 48 ~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~--V~~v~~sp--~g~~la 123 (330)
T 2hes_X 48 LIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENE--VKGVAWSN--DGYYLA 123 (330)
T ss_dssp EEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----C--EEEEEECT--TSCEEE
T ss_pred EEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCc--EEEEEECC--CCCEEE
Confidence 34555 44 999999999999999999999999999999853 3567778888855 99999999 999999
Q ss_pred EEeCCCeEEEEECCCCCCCCCCccc--cccceEEEEEeecccCccceeccCCCCceeeecccCc-cccccCCCCCC----
Q 022870 81 SQGRDGTVKCWDIENGGLSSNPSLT--IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE-TVDTDSLCDSK---- 153 (291)
Q Consensus 81 s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---- 153 (291)
+|+.|++|++||++......+.... .+........+++... ........+...+|+..... .....+.+|..
T Consensus 124 s~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~ 202 (330)
T 2hes_X 124 TCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWS 202 (330)
T ss_dssp EEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEE
T ss_pred EEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEE
Confidence 9999999999999543211111222 2333444445544332 22333445667778765542 33445667766
Q ss_pred cccCCCCCcEEEEecCCcCeEEEEeCCCc--------ceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEE
Q 022870 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTA--------ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVL 225 (291)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~~wd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~ 225 (291)
++|+|++....+++|+.|+.|++||++.+ .+...+.. .| ...+.++. |+++ + +|+
T Consensus 203 ~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~-------~h----~~~v~~v~-~s~~---~--~l~ 265 (330)
T 2hes_X 203 SDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPD-------VH----KRQVYNVA-WGFN---G--LIA 265 (330)
T ss_dssp EEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCS-------CC----SSCEEEEE-ECTT---S--CEE
T ss_pred EEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeeccc-------cc----ccceEEEE-EcCC---C--EEE
Confidence 88999853323336778999999999764 22233321 13 44678887 9865 3 799
Q ss_pred eecCCCcEEEEEccCCCC--ce-eecccccc-ceeEEEeec--CCCeeEEecCCCeEEEEEcCCC
Q 022870 226 AGYEDGSILVWDIRNPGI--PL-TAMKVHLE-PVLCLSIDE--SCNGGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 226 ~g~~dg~i~vwd~~~~~~--~~-~~~~~h~~-~v~~~~~~~--~~~~l~s~s~dg~i~vw~~~~~ 284 (291)
+|+.||.|++||..+ +. .. ..+.+|.. .|++++|+| ++++|++|+.||.|++|++++.
T Consensus 266 s~~~dg~v~iw~~~~-~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~~ 329 (330)
T 2hes_X 266 SVGADGVLAVYEEVD-GEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEKA 329 (330)
T ss_dssp EEETTSCEEEEEEET-TEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC---
T ss_pred EEeCCCEEEEEEcCC-CceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEeccC
Confidence 999999999999986 42 23 23467877 899999998 6889999999999999998753
No 35
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-35 Score=231.75 Aligned_cols=212 Identities=17% Similarity=0.177 Sum_probs=162.1
Q ss_pred CCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCC--eEEEEE-ee-ecCCcceEEEEEeecCCCCeEEEEe
Q 022870 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH--RTVSSS-WV-HSAAHGIVSVATGPSIGLNKVISQG 83 (291)
Q Consensus 8 ~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~-~~-~~~~~~v~~~~~~~~~~~~~l~s~~ 83 (291)
.+++.++++|.++|++++|+|+ +|++|+.|++|++||+..+ +....+ .. |. .+|.+++|+| ++++|++|+
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~--~~v~~v~~sp--~~~~las~s 77 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHK--KAIRSVAWRP--HTSLLAAGS 77 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCC--SCEEEEEECT--TSSEEEEEE
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCcc--CCEEEEEECC--CCCEEEEEe
Confidence 3568899999999999999987 9999999999999999875 455555 33 66 4599999999 999999999
Q ss_pred CCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCC
Q 022870 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAE 159 (291)
Q Consensus 84 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 159 (291)
.|++|++||++...... .... . ...+.+|.. ++|+|+
T Consensus 78 ~D~~v~iw~~~~~~~~~---~~~~--~----------------------------------~~~~~~h~~~V~~v~~sp~ 118 (330)
T 2hes_X 78 FDSTVSIWAKEESADRT---FEMD--L----------------------------------LAIIEGHENEVKGVAWSND 118 (330)
T ss_dssp TTSCEEEEEC----------CCCE--E----------------------------------EEEEC----CEEEEEECTT
T ss_pred CCCcEEEEEcccCcCcc---ccce--e----------------------------------EEEEcCCCCcEEEEEECCC
Confidence 99999999986532100 0000 0 000111111 679999
Q ss_pred CCcEEEEecCCcCeEEEEeCCCc----ceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEE
Q 022870 160 GPKYMAVAGEQLSEVEIWDLNTA----ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 235 (291)
Q Consensus 160 ~~~~~~~~g~~d~~i~~wd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~v 235 (291)
+..++ +|+.|+.|++||++.. +++..+. +| ...+.++. |+|+ +. +|++|+.|+.|++
T Consensus 119 g~~la--s~s~D~~v~iwd~~~~~~~~~~~~~~~--------~h----~~~v~~v~-~~p~---~~-~l~s~s~D~~i~i 179 (330)
T 2hes_X 119 GYYLA--TCSRDKSVWIWETDESGEEYECISVLQ--------EH----SQDVKHVI-WHPS---EA-LLASSSYDDTVRI 179 (330)
T ss_dssp SCEEE--EEETTSCEEEEECCTTCCCCEEEEEEC--------CC----SSCEEEEE-ECSS---SS-EEEEEETTSCEEE
T ss_pred CCEEE--EEeCCCEEEEEeccCCCCCeEEEEEec--------cC----CCceEEEE-ECCC---CC-EEEEEcCCCeEEE
Confidence 87554 6777999999999532 3455565 56 34577787 9998 44 9999999999999
Q ss_pred EEccCCC--CceeeccccccceeEEEeecC--CCeeEEecCCCeEEEEEcCCC
Q 022870 236 WDIRNPG--IPLTAMKVHLEPVLCLSIDES--CNGGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 236 wd~~~~~--~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~dg~i~vw~~~~~ 284 (291)
||.++ + +++..+.+|...|.+++|+|+ +.+|++++.|++|++||++.+
T Consensus 180 W~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 180 WKDYD-DDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp EEEET-TEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred EECCC-CCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 99986 4 577889999999999999998 778999999999999998654
No 36
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.4e-35 Score=236.97 Aligned_cols=258 Identities=17% Similarity=0.229 Sum_probs=198.1
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCe------EEEEEeeecCCcceEEEEEeecCC----C--
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR------TVSSSWVHSAAHGIVSVATGPSIG----L-- 76 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~----~-- 76 (291)
.....+++|.++|++++|+| .+|++|+.||.|++||+.+++ .+..+..|... |.+++|+| + +
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~~g~~ 80 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSG--LHHVDVLQ--AIERDAFE 80 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTC--EEEEEEEE--EEETTTEE
T ss_pred hhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCc--EEEEEEec--ccccCCcc
Confidence 45678899999999999999 699999999999999999887 67888888755 99999999 8 8
Q ss_pred -CeEEEEeCCCeEEEEECCCCCCCCCC---ccccc-----cceEEEEEee----cccCccceeccCCCCceeeeccc---
Q 022870 77 -NKVISQGRDGTVKCWDIENGGLSSNP---SLTIK-----TNSYHFCKLS----LVKEPYANAKQANEPKDCYEREV--- 140 (291)
Q Consensus 77 -~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--- 140 (291)
.+|++++.||.|++||+.+++..... .+..+ ........+. +............+...+|++..
T Consensus 81 ~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 160 (397)
T 1sq9_A 81 LCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFAD 160 (397)
T ss_dssp EEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSS
T ss_pred ccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccc
Confidence 99999999999999999987641110 11222 2344455555 33322133344557778888876
Q ss_pred ---Cccccc----cC-------CCCCC----cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCC---C
Q 022870 141 ---GETVDT----DS-------LCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPN---F 199 (291)
Q Consensus 141 ---~~~~~~----~~-------~~~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~---~ 199 (291)
...... .+ ..|.. ++|+|++ +++ +++.|+.|++||+++++.+..+. . |
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~-~~~~dg~i~i~d~~~~~~~~~~~--------~~~~h 229 (397)
T 1sq9_A 161 ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIA-TGFNNGTVQISELSTLRPLYNFE--------SQHSM 229 (397)
T ss_dssp HHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEE-EECTTSEEEEEETTTTEEEEEEE--------CCC--
T ss_pred ccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEE-EEeCCCcEEEEECCCCceeEEEe--------ccccc
Confidence 433320 11 22332 8999998 344 67779999999999999888887 4 4
Q ss_pred CCCcceeeeeEEEecCCCCCCceEEEeecCC---CcEEEEEccCCCCceeeccc-------------cccceeEEEeecC
Q 022870 200 SSKGRGMCMAVQAYLPSKSQGFVNVLAGYED---GSILVWDIRNPGIPLTAMKV-------------HLEPVLCLSIDES 263 (291)
Q Consensus 200 ~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d---g~i~vwd~~~~~~~~~~~~~-------------h~~~v~~~~~~~~ 263 (291)
.. ....+.++. |+|+ +. +|++++.| |.|++||+++ ++++..+.+ |...|.+++|+|+
T Consensus 230 ~~-~~~~i~~i~-~~~~---~~-~l~~~~~d~~~g~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 302 (397)
T 1sq9_A 230 IN-NSNSIRSVK-FSPQ---GS-LLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS 302 (397)
T ss_dssp -C-CCCCEEEEE-ECSS---TT-EEEEEEEETTEEEEEEEETTT-CCEEEEECBC--------CCBSBSSCEEEEEECSS
T ss_pred cc-cCCccceEE-ECCC---CC-EEEEEecCCCCceEEEEECCC-CcccceeccCcccccccccccccCCcEEEEEECCC
Confidence 11 134567776 9998 44 89999999 9999999998 888889988 9999999999999
Q ss_pred CCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 264 CNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 264 ~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+++|++++.||.|++||+++++.+..+
T Consensus 303 ~~~l~~~~~dg~i~iwd~~~~~~~~~~ 329 (397)
T 1sq9_A 303 GETLCSAGWDGKLRFWDVKTKERITTL 329 (397)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCCeEEEEEcCCCceeEEE
Confidence 999999999999999999999887654
No 37
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.3e-34 Score=228.45 Aligned_cols=250 Identities=16% Similarity=0.206 Sum_probs=184.3
Q ss_pred CceEEecCCccceeEEEE-----cC-CCCEEEEecCCCeEEEEeCCCC-------eEEEEEeeecCCcceEEEEEeecCC
Q 022870 9 DPVAVLRGHRASVTDVCF-----HQ-TKPILFAGTTGGELRIWDTVQH-------RTVSSSWVHSAAHGIVSVATGPSIG 75 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~-----~~-~~~~l~s~~~dg~v~iwd~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~ 75 (291)
++..+|++|.+.|++++| ++ ++.+|++|+.|++|++||+.+. .+...+.+|... |.+++|+| +
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~--V~~~~~~~--~ 87 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHF--VSDLALSQ--E 87 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSC--EEEEEECS--S
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCc--eEEEEECC--C
Confidence 457789999999999999 77 8999999999999999998643 456678888855 99999999 9
Q ss_pred CCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccc-cCCCCCC-
Q 022870 76 LNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT-DSLCDSK- 153 (291)
Q Consensus 76 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 153 (291)
+.++++|+.|++|++||+++++... .+..+........+++.... .......+...+|++........ ....|..
T Consensus 88 ~~~l~s~s~D~~v~lwd~~~~~~~~--~~~~h~~~v~~v~~sp~~~~-l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 164 (343)
T 2xzm_R 88 NCFAISSSWDKTLRLWDLRTGTTYK--RFVGHQSEVYSVAFSPDNRQ-ILSAGAEREIKLWNILGECKFSSAEKENHSDW 164 (343)
T ss_dssp TTEEEEEETTSEEEEEETTSSCEEE--EEECCCSCEEEEEECSSTTE-EEEEETTSCEEEEESSSCEEEECCTTTSCSSC
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEE--EEcCCCCcEEEEEECCCCCE-EEEEcCCCEEEEEeccCCceeeeecccCCCce
Confidence 9999999999999999999886543 22334444555555554332 23334556778888764322221 2224443
Q ss_pred ---cccCCCCC---------cEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCc
Q 022870 154 ---DDVPAEGP---------KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGF 221 (291)
Q Consensus 154 ---~~~~~~~~---------~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~ 221 (291)
++|+|++. .+++ +++.|+.|++||. ..+....+. +|. ..+.++. |+|+ |+
T Consensus 165 v~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~iwd~-~~~~~~~~~--------~h~----~~v~~~~-~s~~---g~ 226 (343)
T 2xzm_R 165 VSCVRYSPIMKSANKVQPFAPYFA-SVGWDGRLKVWNT-NFQIRYTFK--------AHE----SNVNHLS-ISPN---GK 226 (343)
T ss_dssp EEEEEECCCCCSCSCCCSSCCEEE-EEETTSEEEEEET-TTEEEEEEE--------CCS----SCEEEEE-ECTT---SS
T ss_pred eeeeeeccccccccccCCCCCEEE-EEcCCCEEEEEcC-CCceeEEEc--------Ccc----ccceEEE-ECCC---CC
Confidence 78888763 3444 5667999999994 455566666 563 4577787 9998 44
Q ss_pred eEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCce
Q 022870 222 VNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 222 ~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~ 286 (291)
+|++|+.||.|++||+++...+...+. +...|.+++|+|++.+++++ .|+.|++|++.+++.
T Consensus 227 -~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 227 -YIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSK 288 (343)
T ss_dssp -EEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCS
T ss_pred -EEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCC
Confidence 999999999999999965355544443 45679999999999877655 588899999987654
No 38
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-33 Score=228.94 Aligned_cols=253 Identities=11% Similarity=0.147 Sum_probs=190.2
Q ss_pred CceEEecC-CccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCe
Q 022870 9 DPVAVLRG-HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (291)
Q Consensus 9 ~~~~~l~~-h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (291)
+....+.. |...|++++|+|++.+|++|+.||.|++||+.+++.+..+..|... |.+++|++ ++|++++.||.
T Consensus 124 ~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--v~~~~~~~----~~l~~~~~dg~ 197 (401)
T 4aez_A 124 SVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQAR--VGCLSWNR----HVLSSGSRSGA 197 (401)
T ss_dssp CEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC--EEEEEEET----TEEEEEETTSE
T ss_pred cEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCc--eEEEEECC----CEEEEEcCCCC
Confidence 44555554 8999999999999999999999999999999999999999988855 99999965 79999999999
Q ss_pred EEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCcE
Q 022870 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKY 163 (291)
Q Consensus 88 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 163 (291)
|++||++....... .+..+........+++.. .........+...+|++........ +..|.. ++|+|++..+
T Consensus 198 i~i~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~p~~~~l 274 (401)
T 4aez_A 198 IHHHDVRIANHQIG-TLQGHSSEVCGLAWRSDG-LQLASGGNDNVVQIWDARSSIPKFT-KTNHNAAVKAVAWCPWQSNL 274 (401)
T ss_dssp EEEEETTSSSCEEE-EEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCSSEEEE-ECCCSSCCCEEEECTTSTTE
T ss_pred EEEEecccCcceee-EEcCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEccCCCCCccEE-ecCCcceEEEEEECCCCCCE
Confidence 99999985432110 122233344444444422 2233344556788888877554332 233433 8999999888
Q ss_pred EEEe-cCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEe--ecCCCcEEEEEccC
Q 022870 164 MAVA-GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA--GYEDGSILVWDIRN 240 (291)
Q Consensus 164 ~~~~-g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~--g~~dg~i~vwd~~~ 240 (291)
++++ |+.|+.|++||+++++.+..+.. ...+.++. |+|+ +. ++++ |+.||.|++||+++
T Consensus 275 l~~~~gs~d~~i~i~d~~~~~~~~~~~~-------------~~~v~~~~-~s~~---~~-~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 275 LATGGGTMDKQIHFWNAATGARVNTVDA-------------GSQVTSLI-WSPH---SK-EIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp EEEECCTTTCEEEEEETTTCCEEEEEEC-------------SSCEEEEE-ECSS---SS-EEEEEECTTTCEEEEEEEET
T ss_pred EEEecCCCCCEEEEEECCCCCEEEEEeC-------------CCcEEEEE-ECCC---CC-eEEEEeecCCCcEEEEecCC
Confidence 8754 34799999999999998888862 23577787 9998 44 6777 66899999999987
Q ss_pred CCCce--eeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 241 PGIPL--TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 241 ~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
+... ..+.+|...|.+++|+|++.+|++++.||.|++|++.+++.+..
T Consensus 337 -~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 337 -SGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp -TEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC------
T ss_pred -ccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccc
Confidence 4443 34678999999999999999999999999999999999887654
No 39
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.1e-34 Score=231.76 Aligned_cols=267 Identities=16% Similarity=0.186 Sum_probs=189.3
Q ss_pred CceEEecCCccceeEEEEcC-CCCEEEEecCCCeEEEEeCCCCeEEEEEe-------------eecCCcceEEEEEeecC
Q 022870 9 DPVAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSW-------------VHSAAHGIVSVATGPSI 74 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-------------~~~~~~~v~~~~~~~~~ 74 (291)
+....+.+|.++|++++|+| ++++|++|+.||.|++||+.+++....+. .|. .+|.+++|+|.
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~- 110 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHR--YSVETVQWYPH- 110 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCS--SCEEEEEECTT-
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCC--CcEEEEEEccC-
Confidence 56778899999999999999 99999999999999999998876544332 355 45999999993
Q ss_pred CCCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCc--cceeccCCCCceeeecccCccccccCCCCC
Q 022870 75 GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEP--YANAKQANEPKDCYEREVGETVDTDSLCDS 152 (291)
Q Consensus 75 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (291)
++.+|++++.||.|++||+++++... .... ........+.+.... ........+...+|++....... .+..|.
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~-~~~~~~ 186 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQTAD--VFNF-EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSH-ILQGHR 186 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTEEEE--EEEC-SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCE-EECCCC
T ss_pred CCcEEEEEeCCCeEEEeeCCCCccce--eccC-CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceee-eecCCC
Confidence 34689999999999999999876533 1221 122223333332211 23344556677888887665433 344454
Q ss_pred C----cccCCCCCcEEEEecCCcCeEEEEeCCCcc-eeeEeccccc---CCCCCCCCCcceeeeeEEEecCCCCCCceEE
Q 022870 153 K----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAE-RCTRLHQNSC---GGSPNFSSKGRGMCMAVQAYLPSKSQGFVNV 224 (291)
Q Consensus 153 ~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l 224 (291)
. ++|+|+++++++ +|+.||.|++||++++. +...+..... .............+.++. |+|+ ++ +|
T Consensus 187 ~~v~~~~~~~~~~~ll~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~---~~-~l 260 (408)
T 4a11_B 187 QEILAVSWSPRYDYILA-TASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC-FTSD---GL-HL 260 (408)
T ss_dssp SCEEEEEECSSCTTEEE-EEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE-ECTT---SS-EE
T ss_pred CcEEEEEECCCCCcEEE-EEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE-EcCC---CC-EE
Confidence 4 899999987666 56679999999998876 3333321000 000001122355678887 9998 44 89
Q ss_pred EeecCCCcEEEEEccCCC----------------------------------------------CceeeccccccceeEE
Q 022870 225 LAGYEDGSILVWDIRNPG----------------------------------------------IPLTAMKVHLEPVLCL 258 (291)
Q Consensus 225 ~~g~~dg~i~vwd~~~~~----------------------------------------------~~~~~~~~h~~~v~~~ 258 (291)
++++.||.|++||+++.. +++..+.+|...|+++
T Consensus 261 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~ 340 (408)
T 4a11_B 261 LTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCC 340 (408)
T ss_dssp EEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred EEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEE
Confidence 999999999999987622 3345567899999999
Q ss_pred EeecCCCeeEEecCCCeEEEEEcCCCceee
Q 022870 259 SIDESCNGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 259 ~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
+|+|++++|++++.||.|++||+++++.+.
T Consensus 341 ~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 341 VFQSNFQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp EEETTTTEEEEEETTSCEEEEEECC-----
T ss_pred EEcCCCCEEEEECCCCeEEEEeCCCCCccC
Confidence 999999999999999999999999987654
No 40
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.5e-34 Score=249.29 Aligned_cols=219 Identities=15% Similarity=0.218 Sum_probs=174.3
Q ss_pred ceEEecCCccceeEEEEcCC-CCEEEEecCCCeEEEEeCCC-----CeEEEEEeeecCCcceEEEEEeecCCCCeEEEEe
Q 022870 10 PVAVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQ-----HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (291)
Q Consensus 10 ~~~~l~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~iwd~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~ 83 (291)
....+++|++.|++++|+|+ +.+|+||+.|++|++||+.+ +.....+.+|... |.+++|+| ++++|++|+
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~--v~~v~~s~--~g~~l~sgs 449 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHF--VEDVVLSS--DGQFALSGS 449 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSC--EEEEEECT--TSSEEEEEE
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCc--EEEEEECC--CCCEEEEEe
Confidence 34578999999999999985 47999999999999999875 3456678888855 99999999 999999999
Q ss_pred CCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcE
Q 022870 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKY 163 (291)
Q Consensus 84 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
.||+|++||+.+++... .+..+...... ++|+|++..+
T Consensus 450 ~Dg~v~vwd~~~~~~~~--~~~~h~~~v~~----------------------------------------~~~s~~~~~l 487 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTR--RFVGHTKDVLS----------------------------------------VAFSLDNRQI 487 (694)
T ss_dssp TTSEEEEEETTTTEEEE--EEECCSSCEEE----------------------------------------EEECTTSSCE
T ss_pred CCCcEEEEECCCCccee--EEeCCCCCEEE----------------------------------------EEEeCCCCEE
Confidence 99999999998775422 11111111111 5699999776
Q ss_pred EEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCC
Q 022870 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (291)
Q Consensus 164 ~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~ 243 (291)
+ +|+.|+.|++||+.......... ....+...+.++. |+|++. .. .|++|+.|+.|++||+++ .+
T Consensus 488 ~--s~s~D~~i~iwd~~~~~~~~~~~---------~~~~h~~~v~~~~-~~~~~~-~~-~l~s~s~d~~v~vwd~~~-~~ 552 (694)
T 3dm0_A 488 V--SASRDRTIKLWNTLGECKYTISE---------GGEGHRDWVSCVR-FSPNTL-QP-TIVSASWDKTVKVWNLSN-CK 552 (694)
T ss_dssp E--EEETTSCEEEECTTSCEEEEECS---------STTSCSSCEEEEE-ECSCSS-SC-EEEEEETTSCEEEEETTT-CC
T ss_pred E--EEeCCCEEEEEECCCCcceeecc---------CCCCCCCcEEEEE-EeCCCC-cc-eEEEEeCCCeEEEEECCC-Cc
Confidence 5 67779999999987553332222 1112345677887 999842 22 799999999999999998 88
Q ss_pred ceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 244 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 244 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
....+.+|.+.|++++|+|++++|++|+.||.|++||+++++.+..
T Consensus 553 ~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~ 598 (694)
T 3dm0_A 553 LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS 598 (694)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEEC
T ss_pred EEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 8899999999999999999999999999999999999999987754
No 41
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3e-34 Score=253.06 Aligned_cols=259 Identities=15% Similarity=0.189 Sum_probs=206.8
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeE
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i 88 (291)
+..+.+.+|.+.|++++|+|++.+|++|+.||.|++||+.+++.+..+..|... |.+++|+| ++++|++++.||.|
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~--v~~~~~s~--~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETP--VRAGKFIA--RKNWIIVGSDDFRI 79 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC--EEEEEEEG--GGTEEEEEETTSEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCc--EEEEEEeC--CCCEEEEEeCCCeE
Confidence 457889999999999999999999999999999999999999999999988855 99999999 99999999999999
Q ss_pred EEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCcEE
Q 022870 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYM 164 (291)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 164 (291)
++||+.+++... .+..+........+++.... .......+...+|++.........+.+|.. ++|+|++...+
T Consensus 80 ~vw~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 156 (814)
T 3mkq_A 80 RVFNYNTGEKVV--DFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (814)
T ss_dssp EEEETTTCCEEE--EEECCSSCEEEEEECSSSSE-EEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred EEEECCCCcEEE--EEecCCCCEEEEEEeCCCCE-EEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEE
Confidence 999999886543 22333344445555544332 233445567788888776555555556655 89999433444
Q ss_pred EEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCc
Q 022870 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (291)
Q Consensus 165 ~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (291)
+ +++.||.|++||+++++....+.. + ....+..+. |+|.. ++. +|++|+.||.|++||+++ +++
T Consensus 157 ~-~~~~dg~v~vwd~~~~~~~~~~~~--------~---~~~~v~~~~-~~~~~-~~~-~l~~~~~dg~i~~~d~~~-~~~ 220 (814)
T 3mkq_A 157 A-SGCLDRTVKVWSLGQSTPNFTLTT--------G---QERGVNYVD-YYPLP-DKP-YMITASDDLTIKIWDYQT-KSC 220 (814)
T ss_dssp E-EEETTSEEEEEETTCSSCSEEEEC--------C---CTTCCCEEE-ECCST-TCC-EEEEECTTSEEEEEETTT-TEE
T ss_pred E-EEeCCCeEEEEECCCCcceeEEec--------C---CCCCEEEEE-EEECC-CCC-EEEEEeCCCEEEEEECCC-CcE
Confidence 4 566799999999998887777762 2 123455665 99832 144 899999999999999998 888
Q ss_pred eeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 245 LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 245 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+..+.+|...|.+++|+|++.+|++++.||.|++||+.+++.+..+
T Consensus 221 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 266 (814)
T 3mkq_A 221 VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266 (814)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEE
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 9999999999999999999999999999999999999998876653
No 42
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9e-34 Score=245.82 Aligned_cols=248 Identities=19% Similarity=0.262 Sum_probs=186.8
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeE
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i 88 (291)
.....+.+|...|++++|+|++++|++|+.||+|+|||+.+++....+.+|... |.+++|+| ++++|++++.|++|
T Consensus 421 ~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~--v~~~~~s~--~~~~l~s~s~D~~i 496 (694)
T 3dm0_A 421 VAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKD--VLSVAFSL--DNRQIVSASRDRTI 496 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC--EEEEEECT--TSSCEEEEETTSCE
T ss_pred cccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCC--EEEEEEeC--CCCEEEEEeCCCEE
Confidence 345788999999999999999999999999999999999999999999999855 99999999 99999999999999
Q ss_pred EEEECCCCCCCC-CCccccccceEEEEEeecccC-ccceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCc
Q 022870 89 KCWDIENGGLSS-NPSLTIKTNSYHFCKLSLVKE-PYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPK 162 (291)
Q Consensus 89 ~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 162 (291)
++||........ ......+........+++... .........+...+|++...... ..+.+|.. ++|+|++..
T Consensus 497 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~-~~~~~h~~~v~~v~~spdg~~ 575 (694)
T 3dm0_A 497 KLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLR-STLAGHTGYVSTVAVSPDGSL 575 (694)
T ss_dssp EEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEE-EEECCCSSCEEEEEECTTSSE
T ss_pred EEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEE-EEEcCCCCCEEEEEEeCCCCE
Confidence 999986542211 000011223344444544432 23344555677888888765543 34556665 899999975
Q ss_pred EEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCC
Q 022870 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (291)
Q Consensus 163 ~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~ 242 (291)
++ +|+.|+.|++||+++++.+..+. . ...+.+++ |+|+ +. +++++ .++.|++||+++ +
T Consensus 576 l~--sg~~Dg~i~iwd~~~~~~~~~~~--------~-----~~~v~~~~-~sp~---~~-~l~~~-~~~~i~iwd~~~-~ 633 (694)
T 3dm0_A 576 CA--SGGKDGVVLLWDLAEGKKLYSLE--------A-----NSVIHALC-FSPN---RY-WLCAA-TEHGIKIWDLES-K 633 (694)
T ss_dssp EE--EEETTSBCEEEETTTTEEEECCB--------C-----SSCEEEEE-ECSS---SS-EEEEE-ETTEEEEEETTT-T
T ss_pred EE--EEeCCCeEEEEECCCCceEEEec--------C-----CCcEEEEE-EcCC---Cc-EEEEE-cCCCEEEEECCC-C
Confidence 54 67779999999999998877665 2 23567776 9998 43 55555 466799999998 6
Q ss_pred Cceeeccccc-------------------cceeEEEeecCCCeeEEecCCCeEEEEEcCC
Q 022870 243 IPLTAMKVHL-------------------EPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (291)
Q Consensus 243 ~~~~~~~~h~-------------------~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~ 283 (291)
..+..+..+. ..+++++|+|++++|++|+.||.|++|++..
T Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 634 SIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp EEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 6665554321 2378999999999999999999999999864
No 43
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-34 Score=236.18 Aligned_cols=258 Identities=14% Similarity=0.176 Sum_probs=185.8
Q ss_pred CCCceEEe-cCCccceeEEEEcC-CCCEEEEecCCCeEEEEeCCC---Ce---EEEEEeeecCCcceEEEEEeecCCCCe
Q 022870 7 PPDPVAVL-RGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQ---HR---TVSSSWVHSAAHGIVSVATGPSIGLNK 78 (291)
Q Consensus 7 ~~~~~~~l-~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~iwd~~~---~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~ 78 (291)
.++++.++ ++|.+.|++++|+| ++.+|++|+.||+|++||+.+ +. ....+ .|. .+|.+++|+| ++++
T Consensus 51 ~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~--~~v~~~~~~~--~~~~ 125 (437)
T 3gre_A 51 RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCS--STVTQITMIP--NFDA 125 (437)
T ss_dssp CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECS--SCEEEEEECT--TSSE
T ss_pred cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCC--CCEEEEEEeC--CCCE
Confidence 44678888 89999999999999 999999999999999999876 33 23333 366 4599999999 9999
Q ss_pred EEEEeCCCeEEEEECC---CCCCCCCCccccccceEEEEEeec--------------cc-CccceeccCCCCceeeeccc
Q 022870 79 VISQGRDGTVKCWDIE---NGGLSSNPSLTIKTNSYHFCKLSL--------------VK-EPYANAKQANEPKDCYEREV 140 (291)
Q Consensus 79 l~s~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-~~~~~~~~~~~~~~~~~~~~ 140 (291)
|++++.||+|++||++ .++... ...........+.. .. ..........+...+|+++.
T Consensus 126 l~s~s~dg~i~vwd~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 201 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVNHYQQESEVK----FLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRT 201 (437)
T ss_dssp EEEEETTSEEEEEEEEEEEETTEEE----EEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTT
T ss_pred EEEEeCCCEEEEEEeccccCCceee----ccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 9999999999999995 333211 11111111111111 01 11233344456677888877
Q ss_pred CccccccCCC-CCC----cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecC
Q 022870 141 GETVDTDSLC-DSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP 215 (291)
Q Consensus 141 ~~~~~~~~~~-~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 215 (291)
.......... |.. ++|+|++..++ +|+.||.|++||+++++++..+.. .| ...+.++. |+|
T Consensus 202 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~--s~~~dg~i~iwd~~~~~~~~~~~~-------~~----~~~v~~~~-~~~ 267 (437)
T 3gre_A 202 LERLQIIENSPRHGAVSSICIDEECCVLI--LGTTRGIIDIWDIRFNVLIRSWSF-------GD----HAPITHVE-VCQ 267 (437)
T ss_dssp CCEEEEEECCGGGCCEEEEEECTTSCEEE--EEETTSCEEEEETTTTEEEEEEBC-------TT----CEEEEEEE-ECT
T ss_pred CeeeEEEccCCCCCceEEEEECCCCCEEE--EEcCCCeEEEEEcCCccEEEEEec-------CC----CCceEEEE-ecc
Confidence 6544332221 333 89999987555 677799999999999998888752 22 34677775 665
Q ss_pred CCC-CCceEEEeecCCCcEEEEEccCCCCceeeccc--------------------------cccceeEEEeecCCCeeE
Q 022870 216 SKS-QGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV--------------------------HLEPVLCLSIDESCNGGI 268 (291)
Q Consensus 216 ~~~-~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~--------------------------h~~~v~~~~~~~~~~~l~ 268 (291)
.-. ++. +|++|+.||.|++||+++ ++.+..+.+ |...|++++|+ ++++|+
T Consensus 268 ~~s~~~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~ 344 (437)
T 3gre_A 268 FYGKNSV-IVVGGSSKTFLTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILL 344 (437)
T ss_dssp TTCTTEE-EEEEESTTEEEEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEE
T ss_pred ccCCCcc-EEEEEcCCCcEEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEE
Confidence 421 244 899999999999999997 665554443 56678899999 778999
Q ss_pred EecCCCeEEEEEcCCCceeeee
Q 022870 269 SGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 269 s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+|+.||.|++||+++++.++.+
T Consensus 345 s~~~d~~i~~wd~~~~~~~~~~ 366 (437)
T 3gre_A 345 TDEATSSIVMFSLNELSSSKAV 366 (437)
T ss_dssp EEGGGTEEEEEETTCGGGCEEE
T ss_pred ecCCCCeEEEEECCCcccceEE
Confidence 9999999999999998877654
No 44
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.1e-33 Score=234.35 Aligned_cols=252 Identities=17% Similarity=0.240 Sum_probs=195.0
Q ss_pred CCCCceEEecCCccce-eEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeC
Q 022870 6 PPPDPVAVLRGHRASV-TDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (291)
Q Consensus 6 ~~~~~~~~l~~h~~~v-~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (291)
.......++.+|...| .++.+ ++.+|++|+.||+|++||+.+++.+..+.+|... |.+++|+| ++ +|++|+.
T Consensus 109 ~~~~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~--V~~l~~~~--~~-~l~s~s~ 181 (464)
T 3v7d_B 109 KFVPQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGG--VWALKYAH--GG-ILVSGST 181 (464)
T ss_dssp TCCCEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC--EEEEEECS--TT-EEEEEET
T ss_pred CcCcceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcC--EEEEEEcC--CC-EEEEEeC
Confidence 3335577899999885 66666 5679999999999999999999999999999855 99999999 75 9999999
Q ss_pred CCeEEEEECCCCCCCCCCccccccceEEEEEeecccC-ccceeccCCCCceeeecccCccc-------------------
Q 022870 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKE-PYANAKQANEPKDCYEREVGETV------------------- 144 (291)
Q Consensus 85 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------------------- 144 (291)
||+|++||+++++... .+..+........+..... .........+...+|++......
T Consensus 182 dg~i~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (464)
T 3v7d_B 182 DRTVRVWDIKKGCCTH--VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEEN 259 (464)
T ss_dssp TSCEEEEETTTTEEEE--EECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGC
T ss_pred CCCEEEEECCCCcEEE--EECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCC
Confidence 9999999999886543 2222333444444443222 23344455667777877655432
Q ss_pred ---cccCCCCCC--cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCC
Q 022870 145 ---DTDSLCDSK--DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ 219 (291)
Q Consensus 145 ---~~~~~~~~~--~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 219 (291)
.....+|.. .++++++..++ +|+.|+.|++||+++++++..+. +| ...+.++. |+|+
T Consensus 260 ~~~~~~~~~~~~~v~~~~~~~~~l~--~~~~d~~i~vwd~~~~~~~~~~~--------~~----~~~v~~~~-~~~~--- 321 (464)
T 3v7d_B 260 PYFVGVLRGHMASVRTVSGHGNIVV--SGSYDNTLIVWDVAQMKCLYILS--------GH----TDRIYSTI-YDHE--- 321 (464)
T ss_dssp TTEEEEECCCSSCEEEEEEETTEEE--EEETTSCEEEEETTTTEEEEEEC--------CC----SSCEEEEE-EETT---
T ss_pred eEEEEEccCccceEEEEcCCCCEEE--EEeCCCeEEEEECCCCcEEEEec--------CC----CCCEEEEE-EcCC---
Confidence 223344544 56677776554 56679999999999999988887 56 34577776 9998
Q ss_pred CceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceee
Q 022870 220 GFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 220 g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
+. ++++|+.||.|++||+++ ++++..+.+|...|.+++|++ .+|++++.||.|++||+++++...
T Consensus 322 ~~-~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~--~~l~s~s~dg~v~vwd~~~~~~~~ 386 (464)
T 3v7d_B 322 RK-RCISASMDTTIRIWDLEN-GELMYTLQGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDYSRKF 386 (464)
T ss_dssp TT-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECS--SEEEEEETTSEEEEEETTTCCEEE
T ss_pred CC-EEEEEeCCCcEEEEECCC-CcEEEEEeCCCCcEEEEEEcC--CEEEEEeCCCcEEEEECCCCceee
Confidence 44 899999999999999998 889999999999999999985 599999999999999999876554
No 45
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.3e-34 Score=232.33 Aligned_cols=202 Identities=10% Similarity=0.016 Sum_probs=152.7
Q ss_pred CccceeEEEEcCCCCEEE--EecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECC
Q 022870 17 HRASVTDVCFHQTKPILF--AGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94 (291)
Q Consensus 17 h~~~v~~l~~~~~~~~l~--s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 94 (291)
+...+.+++|+|||++++ +++.|++|+|||+++++++..+. |.. .|.+++|+| +|.+|++++.+ .+.+|+..
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~--~V~~v~fsp--dg~~l~s~s~~-~~~~~~~~ 205 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRG--EVKDLHFST--DGKVVAYITGS-SLEVISTV 205 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSS--CCCEEEECT--TSSEEEEECSS-CEEEEETT
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCC--ceEEEEEcc--CCceEEeccce-eEEEEEec
Confidence 455688999999999876 45579999999999999998886 554 499999999 99999999865 56677766
Q ss_pred CCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcC--
Q 022870 95 NGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS-- 172 (291)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~-- 172 (291)
+++.... .....+...... ++|+|++..++++ +.|+
T Consensus 206 ~~~~~~~--~~~~~~~~~v~~--------------------------------------v~fspdg~~l~~~--s~d~~~ 243 (365)
T 4h5i_A 206 TGSCIAR--KTDFDKNWSLSK--------------------------------------INFIADDTVLIAA--SLKKGK 243 (365)
T ss_dssp TCCEEEE--ECCCCTTEEEEE--------------------------------------EEEEETTEEEEEE--EESSSC
T ss_pred cCcceee--eecCCCCCCEEE--------------------------------------EEEcCCCCEEEEE--ecCCcc
Confidence 6543211 111111111100 5689998766643 3344
Q ss_pred --eEEEEeCCCccee----eEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCcee
Q 022870 173 --EVEIWDLNTAERC----TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (291)
Q Consensus 173 --~i~~wd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~ 246 (291)
.+++||+...... ..+. +| ...+.+++ |+|+ |+ +|++|+.|+.|+|||+++ ++++.
T Consensus 244 ~~~i~~~~~~~~~~~~~~~~~~~--------~~----~~~V~~~~-~Spd---g~-~lasgs~D~~V~iwd~~~-~~~~~ 305 (365)
T 4h5i_A 244 GIVLTKISIKSGNTSVLRSKQVT--------NR----FKGITSMD-VDMK---GE-LAVLASNDNSIALVKLKD-LSMSK 305 (365)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEE--------SS----CSCEEEEE-ECTT---SC-EEEEEETTSCEEEEETTT-TEEEE
T ss_pred eeEEeecccccceecceeeeeec--------CC----CCCeEeEE-ECCC---CC-ceEEEcCCCEEEEEECCC-CcEEE
Confidence 6888998776532 2233 34 34577887 9998 55 999999999999999998 78887
Q ss_pred e-ccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCC
Q 022870 247 A-MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 247 ~-~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~ 284 (291)
. +.+|...|++++|+|++++|||||.|++|+||++...
T Consensus 306 ~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 306 IFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 6 5799999999999999999999999999999999654
No 46
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-33 Score=220.49 Aligned_cols=251 Identities=14% Similarity=0.220 Sum_probs=188.5
Q ss_pred CCCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC
Q 022870 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (291)
Q Consensus 7 ~~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (291)
+.++..++.+|.+.|++++| +++.+|++|+.||.|++||+.+++....+..|... |.+++|+| ++.+|++++.||
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~--v~~~~~~~--~~~~l~~~~~dg 81 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGF--LNSVCYDS--EKELLLFGGKDT 81 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSC--EEEEEEET--TTTEEEEEETTS
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCcc--EEEEEECC--CCCEEEEecCCC
Confidence 33678899999999999999 99999999999999999999999999888888755 99999999 999999999999
Q ss_pred eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCC-CCC
Q 022870 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPA-EGP 161 (291)
Q Consensus 87 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~ 161 (291)
.|++|++....... +...+..+......+.+. ..........+...+|+ .......+..|.. +++.| ++.
T Consensus 82 ~i~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~-~~~l~~~~~d~~i~~~d---~~~~~~~~~~~~~~v~~~~~~~~~~~ 156 (313)
T 3odt_A 82 MINGVPLFATSGED-PLYTLIGHQGNVCSLSFQ-DGVVISGSWDKTAKVWK---EGSLVYNLQAHNASVWDAKVVSFSEN 156 (313)
T ss_dssp CEEEEETTCCTTSC-C-CEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEE---TTEEEEEEECCSSCEEEEEEEETTTT
T ss_pred eEEEEEeeecCCCC-cccchhhcccCEEEEEec-CCEEEEEeCCCCEEEEc---CCcEEEecccCCCceeEEEEccCCCC
Confidence 99999998654221 122222222222222222 22233344445566666 2222233334444 67777 555
Q ss_pred cEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCC
Q 022870 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 241 (291)
Q Consensus 162 ~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~ 241 (291)
.++ +++.|+.|++||. .+....+.. .| ...+.++. |+|+ + .+++++.||.|++||+++
T Consensus 157 -~l~-~~~~d~~i~i~d~--~~~~~~~~~-------~~----~~~i~~~~-~~~~---~--~~~~~~~dg~i~i~d~~~- 214 (313)
T 3odt_A 157 -KFL-TASADKTIKLWQN--DKVIKTFSG-------IH----NDVVRHLA-VVDD---G--HFISCSNDGLIKLVDMHT- 214 (313)
T ss_dssp -EEE-EEETTSCEEEEET--TEEEEEECS-------SC----SSCEEEEE-EEET---T--EEEEEETTSEEEEEETTT-
T ss_pred -EEE-EEECCCCEEEEec--CceEEEEec-------cC----cccEEEEE-EcCC---C--eEEEccCCCeEEEEECCc-
Confidence 444 5666999999993 445555552 13 44677776 9987 4 489999999999999998
Q ss_pred CCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 242 GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 242 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
++++..+.+|...|++++|+|++ .|++++.||.|++||+++++.+..+
T Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~ 262 (313)
T 3odt_A 215 GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVI 262 (313)
T ss_dssp CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEE
T ss_pred hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEE
Confidence 88999999999999999999999 5899999999999999999877654
No 47
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.2e-34 Score=233.79 Aligned_cols=260 Identities=13% Similarity=0.124 Sum_probs=192.0
Q ss_pred CceEEecCCccceeEEEEcCC----C---CEEEEecCCCeEEEEeCCCCeE-----EEEEeeecC---CcceEEEEEe--
Q 022870 9 DPVAVLRGHRASVTDVCFHQT----K---PILFAGTTGGELRIWDTVQHRT-----VSSSWVHSA---AHGIVSVATG-- 71 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~----~---~~l~s~~~dg~v~iwd~~~~~~-----~~~~~~~~~---~~~v~~~~~~-- 71 (291)
+++..+.+|..+|++++|+|+ + .+|++++.||.|++||+.+++. ...+..|.. ..+|.+++|+
T Consensus 53 ~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 132 (397)
T 1sq9_A 53 DKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGAS 132 (397)
T ss_dssp GGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECC
T ss_pred CcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeec
Confidence 468889999999999999999 9 9999999999999999988876 778887731 1449999999
Q ss_pred --ecCCCCe-EEEEeCCCeEEEEECCC------CCCCC-CCcccc---------ccceEEEEEeecccCccceeccCCCC
Q 022870 72 --PSIGLNK-VISQGRDGTVKCWDIEN------GGLSS-NPSLTI---------KTNSYHFCKLSLVKEPYANAKQANEP 132 (291)
Q Consensus 72 --~~~~~~~-l~s~~~dg~i~iwd~~~------~~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (291)
| ++.+ |++++.||.|++||+++ .+... .+...+ +........+.+.. ........+.
T Consensus 133 ~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~ 208 (397)
T 1sq9_A 133 NDR--LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGT 208 (397)
T ss_dssp C------CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSE
T ss_pred cCC--CCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCc
Confidence 8 8899 99999999999999988 44322 110011 12223333444433 3334445566
Q ss_pred ceeeecccCccccccCCC---C---CC----cccCCCCCcEEEEecCCc---CeEEEEeCCCcceeeEecccccCC----
Q 022870 133 KDCYEREVGETVDTDSLC---D---SK----DDVPAEGPKYMAVAGEQL---SEVEIWDLNTAERCTRLHQNSCGG---- 195 (291)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~---~---~~----~~~~~~~~~~~~~~g~~d---~~i~~wd~~~~~~~~~~~~~~~~~---- 195 (291)
..+|++........ +.. | .. ++|+|++..++ +++.| +.|++||+++++.+..+.......
T Consensus 209 i~i~d~~~~~~~~~-~~~~~~h~~~~~~i~~i~~~~~~~~l~--~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~ 285 (397)
T 1sq9_A 209 VQISELSTLRPLYN-FESQHSMINNSNSIRSVKFSPQGSLLA--IAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASL 285 (397)
T ss_dssp EEEEETTTTEEEEE-EECCC---CCCCCEEEEEECSSTTEEE--EEEEETTEEEEEEEETTTCCEEEEECBC--------
T ss_pred EEEEECCCCceeEE-EeccccccccCCccceEEECCCCCEEE--EEecCCCCceEEEEECCCCcccceeccCcccccccc
Confidence 77888876554332 223 4 33 89999987555 56668 999999999999888887200000
Q ss_pred -CCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeecc------cc---------------cc
Q 022870 196 -SPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK------VH---------------LE 253 (291)
Q Consensus 196 -~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~------~h---------------~~ 253 (291)
...| ...+.++. |+|+ ++ +|++++.||.|++||+++ ++++..+. +| ..
T Consensus 286 ~~~~~----~~~v~~~~-~~~~---~~-~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 355 (397)
T 1sq9_A 286 GEFAH----SSWVMSLS-FNDS---GE-TLCSAGWDGKLRFWDVKT-KERITTLNMHCDDIEIEEDILAVDEHGDSLAEP 355 (397)
T ss_dssp CCBSB----SSCEEEEE-ECSS---SS-EEEEEETTSEEEEEETTT-TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred ccccc----CCcEEEEE-ECCC---CC-EEEEEeCCCeEEEEEcCC-CceeEEEecccCcccchhhhhccccccccccCC
Confidence 0003 44677887 9998 44 899999999999999998 88888888 78 99
Q ss_pred ceeEEEeecCC----------CeeEEecCCCeEEEEEcCCCc
Q 022870 254 PVLCLSIDESC----------NGGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 254 ~v~~~~~~~~~----------~~l~s~s~dg~i~vw~~~~~~ 285 (291)
.|++++|+|++ ++|++++.||.|++|++++++
T Consensus 356 ~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 356 GVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 99999999998 799999999999999998874
No 48
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.4e-33 Score=239.88 Aligned_cols=240 Identities=18% Similarity=0.294 Sum_probs=186.2
Q ss_pred CCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCe
Q 022870 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (291)
Q Consensus 8 ~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (291)
.+.+..+.+|...|++++|+|++++|++|+.||.|++||. +++.+..+..|... |.+++|+| ++++|++++.|+.
T Consensus 334 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~--v~~~~~s~--dg~~l~~~~~d~~ 408 (577)
T 2ymu_A 334 GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS--VRGVAFSP--DGQTIASASDDKT 408 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSC--EEEEEECT--TSSCEEEEETTSE
T ss_pred CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCC--eEEEEECC--CCCEEEEEeCCCE
Confidence 3556788899999999999999999999999999999995 57888888888855 99999999 9999999999999
Q ss_pred EEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCcE
Q 022870 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKY 163 (291)
Q Consensus 88 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 163 (291)
|++||... +... .+..+........+++..... ..........+|+.... ....+.+|.. ++|+|+++.+
T Consensus 409 v~~~~~~~-~~~~--~~~~~~~~v~~~~~s~d~~~l-~~~~~d~~v~~w~~~~~--~~~~~~~~~~~v~~~~~spd~~~l 482 (577)
T 2ymu_A 409 VKLWNRNG-QLLQ--TLTGHSSSVWGVAFSPDDQTI-ASASDDKTVKLWNRNGQ--LLQTLTGHSSSVRGVAFSPDGQTI 482 (577)
T ss_dssp EEEECTTC-CEEE--EEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTSC--EEEEEECCSSCEEEEEECTTSCEE
T ss_pred EEEEeCCC-CEEE--EecCCCCCeEEEEECCCCCEE-EEEcCCCEEEEEECCCC--EEEEEcCCCCCEEEEEEcCCCCEE
Confidence 99999643 3221 122233344444444433222 22233445566665332 2233445554 8999999755
Q ss_pred EEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCC
Q 022870 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (291)
Q Consensus 164 ~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~ 243 (291)
+ +++.|+.|++||. +++++..+. +|. ..+.+++ |+|+ |+ +|++++.||.|++||.. ++
T Consensus 483 a--s~~~d~~i~iw~~-~~~~~~~~~--------~h~----~~v~~l~-~s~d---g~-~l~s~~~dg~v~lwd~~--~~ 540 (577)
T 2ymu_A 483 A--SASDDKTVKLWNR-NGQLLQTLT--------GHS----SSVRGVA-FSPD---GQ-TIASASDDKTVKLWNRN--GQ 540 (577)
T ss_dssp E--EEETTSEEEEEET-TSCEEEEEE--------CCS----SCEEEEE-ECTT---SS-CEEEEETTSEEEEECTT--SC
T ss_pred E--EEeCCCEEEEEcC-CCCEEEEEe--------CCC----CCEEEEE-EcCC---CC-EEEEEECcCEEEEEeCC--CC
Confidence 4 5667999999995 577888887 664 4577787 9998 44 89999999999999964 78
Q ss_pred ceeeccccccceeEEEeecCCCeeEEecCCCeEEEEE
Q 022870 244 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 280 (291)
Q Consensus 244 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~ 280 (291)
++..+.+|.+.|++++|+|++++|+|++.|++|++||
T Consensus 541 ~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 541 LLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 8999999999999999999999999999999999997
No 49
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1e-33 Score=227.87 Aligned_cols=244 Identities=12% Similarity=0.100 Sum_probs=188.7
Q ss_pred ecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCe--EEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEE
Q 022870 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (291)
Q Consensus 14 l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iw 91 (291)
+..|.++|++++|+|++++|++|+.|+.|++||+.+++ .+..+..|... |.+++|+| ++++|++++.||.|++|
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQ--VTGVDWAP--DSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSC--EEEEEEET--TTTEEEEEETTSCEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCc--ccEEEEeC--CCCEEEEEcCCCeEEEE
Confidence 45699999999999999999999999999999999887 88888888855 99999999 99999999999999999
Q ss_pred ECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCcc---ccccCCCCCC----cccCCCCCcEE
Q 022870 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGET---VDTDSLCDSK----DDVPAEGPKYM 164 (291)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~ 164 (291)
|+++++.........+........+.+... ........+...+|++..... .......|.. ++|+|++..++
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 158 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLA 158 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEE
Confidence 998775322111112233344444444322 223334456677787776552 2223344444 89999987554
Q ss_pred EEecCCcCeEEEEeCC------------------CcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEe
Q 022870 165 AVAGEQLSEVEIWDLN------------------TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (291)
Q Consensus 165 ~~~g~~d~~i~~wd~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~ 226 (291)
+|+.|+.|++||++ .++.+..+. +| ...+.++. |+|+ +. +|++
T Consensus 159 --~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~v~~~~-~~~~---~~-~l~~ 219 (372)
T 1k8k_C 159 --AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS--------SS----CGWVHGVC-FSAN---GS-RVAW 219 (372)
T ss_dssp --EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC--------CC----SSCEEEEE-ECSS---SS-EEEE
T ss_pred --EEcCCCCEEEEEcccccccccccccccccccchhhheEecC--------CC----CCeEEEEE-ECCC---CC-EEEE
Confidence 56679999999964 456666665 44 44677787 9998 44 8999
Q ss_pred ecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCC
Q 022870 227 GYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (291)
Q Consensus 227 g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~ 283 (291)
++.||.|++||+++ ++++..+..|...|.+++|+|++.+|+++ .|+.|++|++++
T Consensus 220 ~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 220 VSHDSTVCLADADK-KMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EETTTEEEEEEGGG-TTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EeCCCEEEEEECCC-CceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 99999999999998 88999999999999999999999988887 899999999988
No 50
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-35 Score=242.92 Aligned_cols=255 Identities=9% Similarity=0.038 Sum_probs=182.3
Q ss_pred CCceEEecCCccceeEEEEcCCC---------CEEEE-------------------ecCCCeEEEEeCCCCeEE----EE
Q 022870 8 PDPVAVLRGHRASVTDVCFHQTK---------PILFA-------------------GTTGGELRIWDTVQHRTV----SS 55 (291)
Q Consensus 8 ~~~~~~l~~h~~~v~~l~~~~~~---------~~l~s-------------------~~~dg~v~iwd~~~~~~~----~~ 55 (291)
.+...++. +.+.|.+|+|+|++ ++||+ ++.|++|+|||+.++++. ..
T Consensus 124 ~r~~~~~~-~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~ 202 (524)
T 2j04_B 124 KRRGFIYN-VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQT 202 (524)
T ss_dssp CSCEEEEE-CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEE
T ss_pred CcceEEEE-CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEE
Confidence 34445555 67899999999976 56665 557899999998776542 33
Q ss_pred EeeecCCcceEEEEEeec----CCCCeEEEEeCCCeEEEEECCCCCCC-------CCCcccc--ccceEEEEEeecccCc
Q 022870 56 SWVHSAAHGIVSVATGPS----IGLNKVISQGRDGTVKCWDIENGGLS-------SNPSLTI--KTNSYHFCKLSLVKEP 122 (291)
Q Consensus 56 ~~~~~~~~~v~~~~~~~~----~~~~~l~s~~~dg~i~iwd~~~~~~~-------~~~~~~~--~~~~~~~~~~~~~~~~ 122 (291)
+..|.. .|.+++|+|. .++.+|++++.||+|++||+.++... ..+...+ +........+.. ..
T Consensus 203 l~~~~~--~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~--~~ 278 (524)
T 2j04_B 203 IVHSFG--EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS--PT 278 (524)
T ss_dssp EEECCC--SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS--SS
T ss_pred EEecCC--cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC--CC
Confidence 555554 4999999992 12579999999999999999876432 1122222 233444444443 22
Q ss_pred cceeccCCCCceeeecccCccccccCCCCCC----c--ccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCC
Q 022870 123 YANAKQANEPKDCYEREVGETVDTDSLCDSK----D--DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGS 196 (291)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 196 (291)
........+...+|++.........+.+|.. + +|+|++..+++ +|+.|++|+|||+++++++..+.
T Consensus 279 ~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~la-S~S~D~tvklWD~~~~~~~~~~~------- 350 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVS-TVAVDGYFYIFNPKDIATTKTTV------- 350 (524)
T ss_dssp EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEE-EEETTSEEEEECGGGHHHHCEEE-------
T ss_pred eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEE-EeccCCeEEEEECCCCCcccccc-------
Confidence 3444556677888998866544444566766 5 56777745555 66779999999999988777665
Q ss_pred CCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeE
Q 022870 197 PNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKI 276 (291)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i 276 (291)
+|... ..+.+++ |+|+ ++ .+++++.|+.|++||+++ +.++..+.+|.+.|++++|+|++++|++|+.||+|
T Consensus 351 -~~~~~--~~v~~v~-fsp~---~~-~l~s~~~d~tv~lwd~~~-~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv 421 (524)
T 2j04_B 351 -SRFRG--SNLVPVV-YCPQ---IY-SYIYSDGASSLRAVPSRA-AFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSL 421 (524)
T ss_dssp -EECSC--CSCCCEE-EETT---TT-EEEEECSSSEEEEEETTC-TTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEE
T ss_pred -ccccc--CcccceE-eCCC---cC-eEEEeCCCCcEEEEECcc-cccceeeecCCCceEEEEeCCCCCeEEEEECCCEE
Confidence 34221 2356676 9998 44 799999999999999998 77778889999999999999999999999999999
Q ss_pred EEEEcCCC
Q 022870 277 VLYNLDHS 284 (291)
Q Consensus 277 ~vw~~~~~ 284 (291)
++||+..+
T Consensus 422 ~lwd~~~~ 429 (524)
T 2j04_B 422 IITNAARR 429 (524)
T ss_dssp ECCBSCSS
T ss_pred EEEechHh
Confidence 99998654
No 51
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-34 Score=236.98 Aligned_cols=251 Identities=16% Similarity=0.150 Sum_probs=191.4
Q ss_pred CceEEecCCccceeEEEEcCC-CCEEEEecCCCeEEEEeCCCCe------EEEE---EeeecCCcceEEEEEeecCC-CC
Q 022870 9 DPVAVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHR------TVSS---SWVHSAAHGIVSVATGPSIG-LN 77 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~iwd~~~~~------~~~~---~~~~~~~~~v~~~~~~~~~~-~~ 77 (291)
+++..+.+|...|++++|+|+ +.+|++++.||.|++||+.+++ .... +..|. .+|.+++|+| + +.
T Consensus 104 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~ 179 (416)
T 2pm9_A 104 NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSV--DEVISLAWNQ--SLAH 179 (416)
T ss_dssp CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS--CCCCEEEECS--SCTT
T ss_pred cchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCC--CCeeEEEeCC--CCCc
Confidence 578889999999999999998 8999999999999999998876 3322 24565 4599999999 7 68
Q ss_pred eEEEEeCCCeEEEEECCCCCCCCCCccccc------cceEEEEEeecccCccceeccCCC---CceeeecccCccccccC
Q 022870 78 KVISQGRDGTVKCWDIENGGLSSNPSLTIK------TNSYHFCKLSLVKEPYANAKQANE---PKDCYEREVGETVDTDS 148 (291)
Q Consensus 78 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 148 (291)
+|++++.||.|++||+++++... .+... ........+.+............+ ...+|+++........+
T Consensus 180 ~l~~~~~dg~v~iwd~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~ 257 (416)
T 2pm9_A 180 VFASAGSSNFASIWDLKAKKEVI--HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTL 257 (416)
T ss_dssp EEEEESSSSCEEEEETTTTEEEE--EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCC
T ss_pred EEEEEcCCCCEEEEECCCCCcce--EEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEe
Confidence 99999999999999999876533 22222 334444555554433344444444 78889988765555555
Q ss_pred C-CCCC----cccCC-CCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCce
Q 022870 149 L-CDSK----DDVPA-EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFV 222 (291)
Q Consensus 149 ~-~~~~----~~~~~-~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~ 222 (291)
. +|.. ++|+| ++.. ++ +++.|+.|++||+++++.+..+. +|. ..+.++. |+|+++ .
T Consensus 258 ~~~~~~~v~~~~~s~~~~~~-l~-s~~~dg~v~~wd~~~~~~~~~~~--------~~~----~~v~~~~-~s~~~~--~- 319 (416)
T 2pm9_A 258 NQGHQKGILSLDWCHQDEHL-LL-SSGRDNTVLLWNPESAEQLSQFP--------ARG----NWCFKTK-FAPEAP--D- 319 (416)
T ss_dssp CSCCSSCEEEEEECSSCSSC-EE-EEESSSEEEEECSSSCCEEEEEE--------CSS----SCCCCEE-ECTTCT--T-
T ss_pred ecCccCceeEEEeCCCCCCe-EE-EEeCCCCEEEeeCCCCccceeec--------CCC----CceEEEE-ECCCCC--C-
Confidence 5 6655 89999 6654 44 56669999999999999998887 563 3566776 999831 3
Q ss_pred EEEeecCCCcEEEEEccCCCCceeec-----------------------------------cccccceeEEEeecCCCee
Q 022870 223 NVLAGYEDGSILVWDIRNPGIPLTAM-----------------------------------KVHLEPVLCLSIDESCNGG 267 (291)
Q Consensus 223 ~l~~g~~dg~i~vwd~~~~~~~~~~~-----------------------------------~~h~~~v~~~~~~~~~~~l 267 (291)
+|++++.||.|++||+.+ ....... ..|..++.+++|+|+|++|
T Consensus 320 ~l~s~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 398 (416)
T 2pm9_A 320 LFACASFDNKIEVQTLQN-LTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLV 398 (416)
T ss_dssp EEEECCSSSEEEEEESCC-CCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEE
T ss_pred EEEEEecCCcEEEEEccC-CCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEE
Confidence 899999999999999987 3322221 1167788899999999999
Q ss_pred EEecCCCeEEEEEcCCC
Q 022870 268 ISGGADQKIVLYNLDHS 284 (291)
Q Consensus 268 ~s~s~dg~i~vw~~~~~ 284 (291)
++++.||.|+||++.+.
T Consensus 399 a~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 399 QITPDGKGVSITNPKIS 415 (416)
T ss_dssp CBCTTSSCBCCBCCCCC
T ss_pred EEeCCCCeEEEEEeccC
Confidence 99999999999999875
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=7.8e-33 Score=219.62 Aligned_cols=247 Identities=17% Similarity=0.193 Sum_probs=186.1
Q ss_pred EecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCe---EEEEEe--eecCCcceEEEEEeecCCCCeEEEEeCCCe
Q 022870 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR---TVSSSW--VHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (291)
Q Consensus 13 ~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (291)
...+|.+.|++++|+|++++|++++ ||.|++||+.+++ ....+. .|. .+|.+++|+| ++++|++++.||.
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~l~~~~~d~~ 120 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRD--NYIRSCKLLP--DGCTLIVGGEAST 120 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTT--SBEEEEEECT--TSSEEEEEESSSE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCC--CcEEEEEEcC--CCCEEEEEcCCCc
Confidence 3347999999999999999999999 9999999998764 333344 444 5599999999 9999999999999
Q ss_pred EEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCcE
Q 022870 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKY 163 (291)
Q Consensus 88 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 163 (291)
|++||+++++.........+........+.+... ........+...+|++....... .+..|.. ++|+|++..+
T Consensus 121 i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~~~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l 198 (337)
T 1gxr_A 121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVR-QFQGHTDGASCIDISNDGTKL 198 (337)
T ss_dssp EEEEECCCC--EEEEEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEE-EECCCSSCEEEEEECTTSSEE
T ss_pred EEEEECCCCCcceeeecccCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCceee-eeecccCceEEEEECCCCCEE
Confidence 9999999875321111222223333444443222 22333445667788887665433 3344444 8999998765
Q ss_pred EEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCC
Q 022870 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (291)
Q Consensus 164 ~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~ 243 (291)
+ +++.|+.|++||+++++.+..+.. ...+.++. |+|+ ++ +|++++.||.|++||+++ .+
T Consensus 199 ~--~~~~dg~i~~~d~~~~~~~~~~~~-------------~~~v~~~~-~s~~---~~-~l~~~~~~~~i~~~~~~~-~~ 257 (337)
T 1gxr_A 199 W--TGGLDNTVRSWDLREGRQLQQHDF-------------TSQIFSLG-YCPT---GE-WLAVGMESSNVEVLHVNK-PD 257 (337)
T ss_dssp E--EEETTSEEEEEETTTTEEEEEEEC-------------SSCEEEEE-ECTT---SS-EEEEEETTSCEEEEETTS-SC
T ss_pred E--EEecCCcEEEEECCCCceEeeecC-------------CCceEEEE-ECCC---CC-EEEEEcCCCcEEEEECCC-CC
Confidence 5 566799999999999988777652 33567776 9998 44 899999999999999997 44
Q ss_pred ceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceee
Q 022870 244 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 244 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
...+..|...|.+++|+|++++|++++.||.|++||+++++.+.
T Consensus 258 -~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 258 -KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF 301 (337)
T ss_dssp -EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred -eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEE
Confidence 45678899999999999999999999999999999999987764
No 53
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.3e-33 Score=229.65 Aligned_cols=260 Identities=12% Similarity=0.120 Sum_probs=180.2
Q ss_pred ceEEecCCccceeEEEEcC-CCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeE
Q 022870 10 PVAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (291)
Q Consensus 10 ~~~~l~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i 88 (291)
....+.+|.+.|++|+|+| ++.+|++|+.||+|++||++++........+.....+.+++|+| ++.+|++|+.||.|
T Consensus 156 ~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~g~~dg~i 233 (435)
T 4e54_B 156 TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSA--SSRMVVTGDNVGNV 233 (435)
T ss_dssp EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEET--TTTEEEEECSSSBE
T ss_pred eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECC--CCCEEEEEeCCCcE
Confidence 3456779999999999998 78899999999999999998765544444444434588999999 99999999999999
Q ss_pred EEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccc--cCCCCCC----cccCCCCCc
Q 022870 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT--DSLCDSK----DDVPAEGPK 162 (291)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~ 162 (291)
++||++.... . .+..+........+.+............+.+.+|+++....... ...+|.. ++|+|++..
T Consensus 234 ~~wd~~~~~~-~--~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~ 310 (435)
T 4e54_B 234 ILLNMDGKEL-W--NLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGAR 310 (435)
T ss_dssp EEEESSSCBC-C--CSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSE
T ss_pred eeeccCccee-E--EEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCe
Confidence 9999976432 2 22334445555555554444444455667788888876654332 2344554 899999976
Q ss_pred EEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcc--eeeeeEEEecCCCC--------CCceEEEeecCCCc
Q 022870 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGR--GMCMAVQAYLPSKS--------QGFVNVLAGYEDGS 232 (291)
Q Consensus 163 ~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~--------~g~~~l~~g~~dg~ 232 (291)
++ +|+.|+.|++||+++++....+. .|..... ....... |+|.+. ++...++++..++.
T Consensus 311 l~--s~~~D~~i~iwd~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 379 (435)
T 4e54_B 311 LL--TTDQKSEIRVYSASQWDCPLGLI--------PHPHRHFQHLTPIKAA-WHPRYNLIVVGRYPDPNFKSCTPYELRT 379 (435)
T ss_dssp EE--EEESSSCEEEEESSSSSSEEEEC--------CCCCCCCSSSCCCBCE-ECSSSSCEEEECCCCTTSCCSSTTCCCC
T ss_pred eE--EEcCCCEEEEEECCCCccceEEe--------cccccccccceeEEEE-EcCCCCEEEEEEcCCCCeEEEEecCCCE
Confidence 55 66779999999999998877765 3322111 1122222 555421 01112233335578
Q ss_pred EEEEEccCCCCceeec-cccccceeEE-EeecCCCeeEEecCCCeEEEEEcCCCcee
Q 022870 233 ILVWDIRNPGIPLTAM-KVHLEPVLCL-SIDESCNGGISGGADQKIVLYNLDHSTVS 287 (291)
Q Consensus 233 i~vwd~~~~~~~~~~~-~~h~~~v~~~-~~~~~~~~l~s~s~dg~i~vw~~~~~~~~ 287 (291)
|++||..+ ++.+..+ .+|...|.++ +|+|+|.+|++|+ |+.|+||++++++..
T Consensus 380 i~iwd~~~-g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 380 IDVFDGNS-GKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp EEEECSSS-CCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred EEEEECCC-CcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 99999998 7777665 4788889887 6999999999886 889999999998753
No 54
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.9e-33 Score=227.35 Aligned_cols=253 Identities=12% Similarity=0.114 Sum_probs=185.7
Q ss_pred CCceEEecCCccceeEEEEcCCC-CEEEEecCCCeEEEEeCCCCeEEEEEee--ecCCcceEEEEEeecCCCCeEEEEeC
Q 022870 8 PDPVAVLRGHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQHRTVSSSWV--HSAAHGIVSVATGPSIGLNKVISQGR 84 (291)
Q Consensus 8 ~~~~~~l~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (291)
.+....+.+|.+.|++++|+|++ ++|++|+.||.|++||+.+++....+.. |. ..|.+++|+|. ++++|++++.
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~--~~v~~~~~~~~-~~~~l~s~~~ 139 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPG--DAITGMKFNQF-NTNQLFVSSI 139 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTT--CBEEEEEEETT-EEEEEEEEET
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcC--CceeEEEeCCC-CCCEEEEEeC
Confidence 45678899999999999999998 8999999999999999998887777764 55 55999999993 2479999999
Q ss_pred CCeEEEEECCCCCCCCCCccccc--cceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCC
Q 022870 85 DGTVKCWDIENGGLSSNPSLTIK--TNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPA 158 (291)
Q Consensus 85 dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 158 (291)
|+.|++||+++..... ..... ........+++... ........+...+|++... ....+..|.. ++|+|
T Consensus 140 d~~i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~--~~~~~~~h~~~v~~~~~~~ 214 (383)
T 3ei3_B 140 RGATTLRDFSGSVIQV--FAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLDGH--EIFKEKLHKAKVTHAEFNP 214 (383)
T ss_dssp TTEEEEEETTSCEEEE--EECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETTSC--EEEEEECSSSCEEEEEECS
T ss_pred CCEEEEEECCCCceEE--EeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECCCC--EEEEeccCCCcEEEEEECC
Confidence 9999999998643211 11111 12244444444332 2233344566777777422 2333445544 89999
Q ss_pred CCCcEEEEecCCcCeEEEEeCCC----cceeeEecccccCCCCCCCCCcceeeeeEEEecC-CCCCCceEEEeecCCCcE
Q 022870 159 EGPKYMAVAGEQLSEVEIWDLNT----AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP-SKSQGFVNVLAGYEDGSI 233 (291)
Q Consensus 159 ~~~~~~~~~g~~d~~i~~wd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~g~~~l~~g~~dg~i 233 (291)
+++.+++ +|+.|+.|++||+++ +..+..+. | ...+.++. |+| + +. +|++++.|+.|
T Consensus 215 ~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~---------~----~~~v~~~~-~s~~~---~~-~l~~~~~d~~i 275 (383)
T 3ei3_B 215 RCDWLMA-TSSVDATVKLWDLRNIKDKNSYIAEMP---------H----EKPVNAAY-FNPTD---ST-KLLTTDQRNEI 275 (383)
T ss_dssp SCTTEEE-EEETTSEEEEEEGGGCCSTTCEEEEEE---------C----SSCEEEEE-ECTTT---SC-EEEEEESSSEE
T ss_pred CCCCEEE-EEeCCCEEEEEeCCCCCcccceEEEec---------C----CCceEEEE-EcCCC---CC-EEEEEcCCCcE
Confidence 9986666 566799999999998 44555443 2 45678887 999 7 44 89999999999
Q ss_pred EEEEccCCCCceeeccccc-----------------cceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 234 LVWDIRNPGIPLTAMKVHL-----------------EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 234 ~vwd~~~~~~~~~~~~~h~-----------------~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
++||+++ .+....+.+|. ..+..++|+|++++ +++.||.|++||+++++.++.+
T Consensus 276 ~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l 346 (383)
T 3ei3_B 276 RVYSSYD-WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQL 346 (383)
T ss_dssp EEEETTB-TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEE
T ss_pred EEEECCC-CccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeee
Confidence 9999998 66666665543 33445777777776 8889999999999999887764
No 55
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.9e-33 Score=223.17 Aligned_cols=261 Identities=11% Similarity=0.084 Sum_probs=183.5
Q ss_pred CCCCCCCCCceEEecCCccceeEEEEcCCCCEE-EEecC---CCeEEEEeCCCCeEEEEEe-eecCCcceEEEEEeecCC
Q 022870 1 MSKRPPPPDPVAVLRGHRASVTDVCFHQTKPIL-FAGTT---GGELRIWDTVQHRTVSSSW-VHSAAHGIVSVATGPSIG 75 (291)
Q Consensus 1 m~~~~~~~~~~~~l~~h~~~v~~l~~~~~~~~l-~s~~~---dg~v~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~ 75 (291)
|.....|......+++|...|++++|+|++..+ ++|+. ||.|++||+.+++...... .|. .+|.+++|+| +
T Consensus 1 m~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~--~~v~~~~~~~--~ 76 (357)
T 3i2n_A 1 MSAFEKPQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKA--KPIKCGTFGA--T 76 (357)
T ss_dssp ----CCCCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEES--SCEEEEECTT--C
T ss_pred CCccChhHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeeccc--CcEEEEEEcC--C
Confidence 333344444456678899999999999988654 56665 9999999999887655433 565 4599999999 7
Q ss_pred ---CCeEEEEeCCCeEEEEECCCCC-CCCCCccccccceEEEEEeec--ccCc---cceeccCCCCceeeecccCccccc
Q 022870 76 ---LNKVISQGRDGTVKCWDIENGG-LSSNPSLTIKTNSYHFCKLSL--VKEP---YANAKQANEPKDCYEREVGETVDT 146 (291)
Q Consensus 76 ---~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 146 (291)
+.+|++++.||.|++||+.+++ ... .+..+........+.. ...+ ........+...+|++........
T Consensus 77 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 154 (357)
T 3i2n_A 77 SLQQRYLATGDFGGNLHIWNLEAPEMPVY--SVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVA 154 (357)
T ss_dssp CTTTCCEEEEETTSCEEEECTTSCSSCSE--EECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSE
T ss_pred CCCCceEEEecCCCeEEEEeCCCCCccEE--EEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcce
Confidence 6999999999999999999876 322 2222333333333221 1122 233344556778888877653333
Q ss_pred cCCCCC---C-----cc----cCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEec
Q 022870 147 DSLCDS---K-----DD----VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYL 214 (291)
Q Consensus 147 ~~~~~~---~-----~~----~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (291)
.+..+. . ++ |+|++..++ +++.|+.|++||+++++...... | ...+.++. |+
T Consensus 155 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~--~~~~d~~i~i~d~~~~~~~~~~~---------~----~~~v~~~~-~~ 218 (357)
T 3i2n_A 155 NMEPVQGENKRDCWTVAFGNAYNQEERVVC--AGYDNGDIKLFDLRNMALRWETN---------I----KNGVCSLE-FD 218 (357)
T ss_dssp EECCCTTSCCCCEEEEEEECCCC-CCCEEE--EEETTSEEEEEETTTTEEEEEEE---------C----SSCEEEEE-ES
T ss_pred eccccCCCCCCceEEEEEEeccCCCCCEEE--EEccCCeEEEEECccCceeeecC---------C----CCceEEEE-cC
Confidence 332221 1 33 788887555 56678999999999988755443 3 34577787 99
Q ss_pred CCCCCCceEEEeecCCCcEEEEEccCCCCceeecc-----ccccceeEEEeecCCC-eeEEecCCCeEEEEEcCCCc
Q 022870 215 PSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK-----VHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 215 p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~-~l~s~s~dg~i~vw~~~~~~ 285 (291)
|...++. +|++|+.||.|++||+++ +++...+. +|...|++++|+|++. +|++++.||.|++||++.+.
T Consensus 219 ~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 219 RKDISMN-KLVATSLEGKFHVFDMRT-QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp CSSSSCC-EEEEEESTTEEEEEEEEE-EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred CCCCCCC-EEEEECCCCeEEEEeCcC-CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 9321144 899999999999999987 66555554 8999999999999998 89999999999999998653
No 56
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=230.99 Aligned_cols=249 Identities=14% Similarity=0.176 Sum_probs=191.1
Q ss_pred CCccceeEEEEcCCCCEEEEecCCCeEEEEeCCC----CeEEEEEeeecCCcceEEEEEeecCC-CCeEEEEeCCCeEEE
Q 022870 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ----HRTVSSSWVHSAAHGIVSVATGPSIG-LNKVISQGRDGTVKC 90 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~s~~~dg~i~i 90 (291)
.|...|++++|+|++.+|++|+.||.|++||+.+ .+.+..+..|... |.+++|+| + +++|++++.||.|++
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~~l~s~~~dg~v~i 140 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSS--VKTVKFNA--KQDNVLASGGNNGEIFI 140 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSC--CCEEEECS--SSTTBEEEECSSSCEEB
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccc--eEEEEEcC--CCCCEEEEEcCCCeEEE
Confidence 4889999999999999999999999999999987 4577888888855 99999999 7 789999999999999
Q ss_pred EECCCCC------CCCCC-ccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCC-----CCC----c
Q 022870 91 WDIENGG------LSSNP-SLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC-----DSK----D 154 (291)
Q Consensus 91 wd~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~ 154 (291)
||+++.+ ..... ....+........+.+............+...+|++............ |.. +
T Consensus 141 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~ 220 (416)
T 2pm9_A 141 WDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVV 220 (416)
T ss_dssp CBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEE
T ss_pred EECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEE
Confidence 9999876 21110 011222333344444433333444456677888888776544332221 122 8
Q ss_pred ccCCCCCcEEEEecCCcC---eEEEEeCCCc-ceeeEecccccCCCCCCCCCcceeeeeEEEecC-CCCCCceEEEeecC
Q 022870 155 DVPAEGPKYMAVAGEQLS---EVEIWDLNTA-ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP-SKSQGFVNVLAGYE 229 (291)
Q Consensus 155 ~~~~~~~~~~~~~g~~d~---~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~g~~~l~~g~~ 229 (291)
+|+|++..+++ +++.|+ .|++||++++ ++...+.. +| ...+.++. |+| + +. +|++++.
T Consensus 221 ~~~~~~~~~l~-~~~~d~~~~~i~~~d~~~~~~~~~~~~~-------~~----~~~v~~~~-~s~~~---~~-~l~s~~~ 283 (416)
T 2pm9_A 221 EWHPKNSTRVA-TATGSDNDPSILIWDLRNANTPLQTLNQ-------GH----QKGILSLD-WCHQD---EH-LLLSSGR 283 (416)
T ss_dssp EECSSCTTEEE-EEECCSSSCCCCEEETTSTTSCSBCCCS-------CC----SSCEEEEE-ECSSC---SS-CEEEEES
T ss_pred EECCCCCCEEE-EEECCCCCceEEEEeCCCCCCCcEEeec-------Cc----cCceeEEE-eCCCC---CC-eEEEEeC
Confidence 99999877766 455577 9999999986 34444331 23 45678887 999 5 44 8999999
Q ss_pred CCcEEEEEccCCCCceeeccccccceeEEEeecCC-CeeEEecCCCeEEEEEcCCCce
Q 022870 230 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 230 dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~dg~i~vw~~~~~~~ 286 (291)
||.|++||+++ ++++..+.+|...|++++|+|++ .+|++++.||.|++|++++.+.
T Consensus 284 dg~v~~wd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 284 DNTVLLWNPES-AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp SSEEEEECSSS-CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred CCCEEEeeCCC-CccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 99999999998 88999999999999999999998 8999999999999999988764
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.7e-33 Score=227.65 Aligned_cols=235 Identities=17% Similarity=0.268 Sum_probs=177.0
Q ss_pred CCCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC
Q 022870 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (291)
Q Consensus 7 ~~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (291)
..++...+.+|.+.|++++|+|++++|++|+.|++|++||+.+++.+..+..|... |.+++|+| ++++|++++.||
T Consensus 128 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~s~~~d~ 203 (420)
T 3vl1_A 128 FNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRAT--VTDIAIID--RGRNVLSASLDG 203 (420)
T ss_dssp SCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSC--EEEEEEET--TTTEEEEEETTS
T ss_pred CcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCc--EEEEEEcC--CCCEEEEEcCCC
Confidence 34566777899999999999999999999999999999999999999999888855 99999999 999999999999
Q ss_pred eEEEEECCCCCCCCCCcccc---ccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcE
Q 022870 87 TVKCWDIENGGLSSNPSLTI---KTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKY 163 (291)
Q Consensus 87 ~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
.|++||+++++... .+.. .........+....... ........-..++|+|++..+
T Consensus 204 ~v~iwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~-------------------~~~~~~~~v~~~~~s~~~~~l 262 (420)
T 3vl1_A 204 TIRLWECGTGTTIH--TFNRKENPHDGVNSIALFVGTDRQ-------------------LHEISTSKKNNLEFGTYGKYV 262 (420)
T ss_dssp CEEEEETTTTEEEE--EECBTTBTTCCEEEEEEEECCCSS-------------------CGGGCCCCCCTTCSSCTTEEE
T ss_pred cEEEeECCCCceeE--EeecCCCCCCCccEEEEecCCcce-------------------eeecccCcccceEEcCCCCEE
Confidence 99999999876433 1111 11112222111111000 000000011118899999765
Q ss_pred EEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCC
Q 022870 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (291)
Q Consensus 164 ~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~ 243 (291)
+ +|+.||.|++||+++++.+..+.. .| ...+.++. |+|++ ..+|++|+.||.|++||+++...
T Consensus 263 ~--~~~~dg~i~i~d~~~~~~~~~~~~-------~~----~~~v~~~~-~~~~~---~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 263 I--AGHVSGVITVHNVFSKEQTIQLPS-------KF----TCSCNSLT-VDGNN---ANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp E--EEETTSCEEEEETTTCCEEEEECC-------TT----SSCEEEEE-ECSSC---TTEEEEEETTSEEEEEETTCTTS
T ss_pred E--EEcCCCeEEEEECCCCceeEEccc-------cc----CCCceeEE-EeCCC---CCEEEEEeCCCeEEEEEcCCCcC
Confidence 4 566799999999999988877763 33 45677887 99983 33899999999999999998556
Q ss_pred ceeeccc-cccceeEEEeecCCCeeEEecCCCeEEEEEcCCC
Q 022870 244 PLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 244 ~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~ 284 (291)
++..+.+ |...|.++.+ +++.+|++++.||.|++|++...
T Consensus 326 ~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 326 PVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp CSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCT
T ss_pred chhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCC
Confidence 6788877 5667887755 46789999999999999998873
No 58
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.8e-32 Score=227.13 Aligned_cols=254 Identities=15% Similarity=0.197 Sum_probs=193.1
Q ss_pred CCCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC
Q 022870 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (291)
Q Consensus 7 ~~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (291)
..+++..+.+|.+.|++++|+|++ +|++|+.||+|++||+++++++..+..|... |.+++|++..++.++++++.||
T Consensus 151 ~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~--v~~l~~~~~~~~~~l~s~s~d~ 227 (464)
T 3v7d_B 151 NKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNST--VRCLDIVEYKNIKYIVTGSRDN 227 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSC--EEEEEEEESSSCEEEEEEETTS
T ss_pred CCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCc--cEEEEEecCCCCCEEEEEcCCC
Confidence 346788899999999999999988 9999999999999999999999999988855 9999999643778999999999
Q ss_pred eEEEEECCCCCCCCCC-------------------ccccccceEEEEEeecccCccceeccCCCCceeeecccCcccccc
Q 022870 87 TVKCWDIENGGLSSNP-------------------SLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTD 147 (291)
Q Consensus 87 ~i~iwd~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (291)
+|++||+++....... ......+......+... ..........+...+|++....... .
T Consensus 228 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~-~ 305 (464)
T 3v7d_B 228 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGH-GNIVVSGSYDNTLIVWDVAQMKCLY-I 305 (464)
T ss_dssp CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEE-E
T ss_pred cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEE-E
Confidence 9999999877543210 00111111111111111 1123334445677888887655433 3
Q ss_pred CCCCCC----cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceE
Q 022870 148 SLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVN 223 (291)
Q Consensus 148 ~~~~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~ 223 (291)
+.+|.. ++|+|+++.++ +|+.||.|++||+++++++..+. +|. ..+.++. |++. +
T Consensus 306 ~~~~~~~v~~~~~~~~~~~l~--sg~~dg~i~vwd~~~~~~~~~~~--------~h~----~~v~~~~-~~~~------~ 364 (464)
T 3v7d_B 306 LSGHTDRIYSTIYDHERKRCI--SASMDTTIRIWDLENGELMYTLQ--------GHT----ALVGLLR-LSDK------F 364 (464)
T ss_dssp ECCCSSCEEEEEEETTTTEEE--EEETTSCEEEEETTTTEEEEEEC--------CCS----SCEEEEE-ECSS------E
T ss_pred ecCCCCCEEEEEEcCCCCEEE--EEeCCCcEEEEECCCCcEEEEEe--------CCC----CcEEEEE-EcCC------E
Confidence 345544 89999987655 67779999999999999999887 663 4566776 8754 8
Q ss_pred EEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 224 l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
|++|+.||.|++||+++ ....... .|...+..++|++++.+|++++ ||.|++||++++++++.
T Consensus 365 l~s~s~dg~v~vwd~~~-~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 365 LVSAAADGSIRGWDAND-YSRKFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp EEEEETTSEEEEEETTT-CCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEES
T ss_pred EEEEeCCCcEEEEECCC-Cceeeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEeh
Confidence 99999999999999998 5544444 3567788899999999999998 99999999999998875
No 59
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=233.24 Aligned_cols=253 Identities=14% Similarity=0.164 Sum_probs=182.6
Q ss_pred CccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCe-----------EEEEEeeecCC----------cceEEEEEeecCC
Q 022870 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR-----------TVSSSWVHSAA----------HGIVSVATGPSIG 75 (291)
Q Consensus 17 h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~-----------~~~~~~~~~~~----------~~v~~~~~~~~~~ 75 (291)
|.+.|++++|+|+|.+||+|+.||.|+|||+.+++ ....+.+|... .+|.+++|+| +
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~--~ 104 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP--Q 104 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC--C
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC--C
Confidence 67899999999999999999999999999998776 57778888621 3499999999 7
Q ss_pred C--CeEEEEeCCCeEEEEECCCCCCCC----------------------CC---------------c-cccccceEEEEE
Q 022870 76 L--NKVISQGRDGTVKCWDIENGGLSS----------------------NP---------------S-LTIKTNSYHFCK 115 (291)
Q Consensus 76 ~--~~l~s~~~dg~i~iwd~~~~~~~~----------------------~~---------------~-~~~~~~~~~~~~ 115 (291)
+ .+|++++.|++|++||+.+..... .+ . ...+........
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 6 789999999999999987633210 00 0 011222223333
Q ss_pred eecccCccceeccCCCCceeeecccCccccc-------cCCCCCC----cccCCCCCcEEEEecCCcCeEEEEeCCCcce
Q 022870 116 LSLVKEPYANAKQANEPKDCYEREVGETVDT-------DSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAER 184 (291)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~ 184 (291)
+++....... ...+...+|++........ .+.+|.. ++|+|++..+++ +|+.||.|++||+++++.
T Consensus 185 ~~~~~~~l~s--~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~-s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 185 INSDYETYLS--ADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFV-YSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp ECTTSSEEEE--ECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEE-EEETTSCEEEEETTTCSS
T ss_pred EcCCCCEEEE--eCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEE-EEeCCCeEEEEECcCCcc
Confidence 3333222222 2466677888874332211 2445555 899999855555 566799999999999886
Q ss_pred ----eeEecccccCCCCCCCCC--------cceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccc
Q 022870 185 ----CTRLHQNSCGGSPNFSSK--------GRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHL 252 (291)
Q Consensus 185 ----~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~ 252 (291)
...+. +|... ....+.++. |+|+ |+ +|++++. +.|++||+++.++++..+.+|.
T Consensus 262 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~v~~~~-~s~~---g~-~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~ 327 (447)
T 3dw8_B 262 CDRHSKLFE--------EPEDPSNRSFFSEIISSISDVK-FSHS---GR-YMMTRDY-LSVKVWDLNMENRPVETYQVHE 327 (447)
T ss_dssp SCTTCEEEC--------CC-----CCHHHHHTTCEEEEE-ECTT---SS-EEEEEES-SEEEEEETTCCSSCSCCEESCG
T ss_pred ccceeeEec--------cCCCccccccccccCceEEEEE-ECCC---CC-EEEEeeC-CeEEEEeCCCCccccceeeccc
Confidence 56666 34221 012678887 9998 54 8999988 9999999987578888888886
Q ss_pred cc---------------eeEEEeecCCCeeEEecCCCeEEEEEcCCCceee
Q 022870 253 EP---------------VLCLSIDESCNGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 253 ~~---------------v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
.. +..++|+|++.+|++|+.||.|++||+++++.+.
T Consensus 328 ~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 328 YLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp GGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred cccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 42 2349999999999999999999999999988753
No 60
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.1e-32 Score=219.43 Aligned_cols=249 Identities=13% Similarity=0.083 Sum_probs=187.2
Q ss_pred eEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCe---EEEEEeeecCCcceEEEEEeecCCCC-eEEEEeCCC
Q 022870 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR---TVSSSWVHSAAHGIVSVATGPSIGLN-KVISQGRDG 86 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg 86 (291)
+....+|.+.|++++|+|++.+|++++.||.|++||+.+++ ....+..|.. +|.+++|+| ++. +|++++.||
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~--~v~~~~~~~--~~~~~l~~~~~dg 79 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH--PLLCCNFID--NTDLQIYVGTVQG 79 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSS--CEEEEEEEE--SSSEEEEEEETTS
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCC--ceEEEEECC--CCCcEEEEEcCCC
Confidence 34456899999999999999999999999999999998776 3444556764 499999999 889 999999999
Q ss_pred eEEEEEC-CCCCCCCCCcccc--ccceEEEEEeecccCccceeccCCCCceeeeccc---------CccccccCCCCCC-
Q 022870 87 TVKCWDI-ENGGLSSNPSLTI--KTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV---------GETVDTDSLCDSK- 153 (291)
Q Consensus 87 ~i~iwd~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~- 153 (291)
.|++||+ .+++.. .+.. +........+.. ..........+...+|++.. ..... .+. +..
T Consensus 80 ~i~~wd~~~~~~~~---~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~-~~~~ 152 (342)
T 1yfq_A 80 EILKVDLIGSPSFQ---ALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSN-NTK-VKNK 152 (342)
T ss_dssp CEEEECSSSSSSEE---ECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSS-SSS-SCCC
T ss_pred eEEEEEeccCCceE---eccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeee-EEe-eCCc
Confidence 9999999 776531 2222 334444555554 33344445556677787765 33222 222 333
Q ss_pred ---cccCCCCCcEEEEecCCcCeEEEEeCCC-cceee-EecccccCCCCCCCCCcceeeeeEEEecC-CCCCCceEEEee
Q 022870 154 ---DDVPAEGPKYMAVAGEQLSEVEIWDLNT-AERCT-RLHQNSCGGSPNFSSKGRGMCMAVQAYLP-SKSQGFVNVLAG 227 (291)
Q Consensus 154 ---~~~~~~~~~~~~~~g~~d~~i~~wd~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~g~~~l~~g 227 (291)
++|+|++ + + +++.|+.|++||+++ +.... .... .| ...+.++. |+| + +. ++++|
T Consensus 153 v~~~~~~~~~--l-~-~~~~d~~i~i~d~~~~~~~~~~~~~~-------~~----~~~i~~i~-~~~~~---~~-~l~~~ 212 (342)
T 1yfq_A 153 IFTMDTNSSR--L-I-VGMNNSQVQWFRLPLCEDDNGTIEES-------GL----KYQIRDVA-LLPKE---QE-GYACS 212 (342)
T ss_dssp EEEEEECSSE--E-E-EEESTTEEEEEESSCCTTCCCEEEEC-------SC----SSCEEEEE-ECSGG---GC-EEEEE
T ss_pred eEEEEecCCc--E-E-EEeCCCeEEEEECCccccccceeeec-------CC----CCceeEEE-ECCCC---CC-EEEEE
Confidence 8888876 3 3 556689999999998 55322 2221 22 34567776 999 7 44 89999
Q ss_pred cCCCcEEEEEccCC-----CCceeecccccc---------ceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 228 YEDGSILVWDIRNP-----GIPLTAMKVHLE---------PVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 228 ~~dg~i~vwd~~~~-----~~~~~~~~~h~~---------~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+.||.|++||++.. .+....+..|.. .|++++|+|++++|++++.||.|++||+++++.+..+
T Consensus 213 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 289 (342)
T 1yfq_A 213 SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNF 289 (342)
T ss_dssp ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred ecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhh
Confidence 99999999999884 277788888865 9999999999999999999999999999999887654
No 61
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-33 Score=228.28 Aligned_cols=238 Identities=14% Similarity=0.212 Sum_probs=185.6
Q ss_pred CccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCC
Q 022870 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96 (291)
Q Consensus 17 h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 96 (291)
|.+.|++++|+|++.+|++|+.||.|++|| .+++.+..+..|... |.+++|+| ++++|++++.||.|++||+.++
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~--v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~ 181 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAP--IVSVKWNK--DGTHIISMDVENVTILWNVISG 181 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSC--EEEEEECT--TSSEEEEEETTCCEEEEETTTT
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCcc--EEEEEECC--CCCEEEEEecCCeEEEEECCCC
Confidence 788999999999999999999999999999 678888888888855 99999999 9999999999999999999887
Q ss_pred CCCCCCccccccceEE---------------EEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccC
Q 022870 97 GLSSNPSLTIKTNSYH---------------FCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVP 157 (291)
Q Consensus 97 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 157 (291)
+... .+...... ...+..............+...+|++....... .+..|.. ++|+
T Consensus 182 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~-~~~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 182 TVMQ----HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTG-KLIGHHGPISVLEFN 256 (425)
T ss_dssp EEEE----EECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSE-EECCCSSCEEEEEEE
T ss_pred cEEE----EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceee-eeccCCCceEEEEEC
Confidence 6433 11111111 111111111223333444566677776654332 2334444 8999
Q ss_pred CCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEE
Q 022870 158 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (291)
Q Consensus 158 ~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (291)
|+++.++ +++.|+.|++||+++++.+..+. +| ...+.++. |+|+ + ++++++.||.|++||
T Consensus 257 ~~~~~l~--~~~~d~~i~i~d~~~~~~~~~~~--------~~----~~~i~~~~-~~~~---~--~l~~~~~d~~i~i~d 316 (425)
T 1r5m_A 257 DTNKLLL--SASDDGTLRIWHGGNGNSQNCFY--------GH----SQSIVSAS-WVGD---D--KVISCSMDGSVRLWS 316 (425)
T ss_dssp TTTTEEE--EEETTSCEEEECSSSBSCSEEEC--------CC----SSCEEEEE-EETT---T--EEEEEETTSEEEEEE
T ss_pred CCCCEEE--EEcCCCEEEEEECCCCccceEec--------CC----CccEEEEE-ECCC---C--EEEEEeCCCcEEEEE
Confidence 9997554 56679999999999998888886 45 34567776 9997 4 799999999999999
Q ss_pred ccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCc
Q 022870 238 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 238 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~ 285 (291)
+++ ++.+..+..|...|.+++|+|++++|++++.||.|++||+++++
T Consensus 317 ~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 317 LKQ-NTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp TTT-TEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred CCC-CcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 998 88889999999999999999999999999999999999998877
No 62
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.6e-33 Score=229.06 Aligned_cols=253 Identities=15% Similarity=0.169 Sum_probs=193.8
Q ss_pred EEecCCccceeEEEEcCC-CCEEEEecCCCeEEEEeCCC----------CeEEEEEeeecCCcceEEEEEeecCCCC-eE
Q 022870 12 AVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQ----------HRTVSSSWVHSAAHGIVSVATGPSIGLN-KV 79 (291)
Q Consensus 12 ~~l~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~iwd~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l 79 (291)
....+|.+.|++++|+|+ +.+|++++.||.|++||+.+ .+.+..+..|... |.+++|+| ++. +|
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~--v~~l~~~~--~~~~~l 197 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKE--GYGLSWNP--NLNGYL 197 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSC--CCCEEECT--TSTTEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCC--eEEEEeCC--CCCCeE
Confidence 455679999999999997 77999999999999999976 5677788888855 99999999 777 99
Q ss_pred EEEeCCCeEEEEECCCCCCCCC-----CccccccceEEEEEeecccCccceeccCCCCceeeecccCc--cccccCCCCC
Q 022870 80 ISQGRDGTVKCWDIENGGLSSN-----PSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE--TVDTDSLCDS 152 (291)
Q Consensus 80 ~s~~~dg~i~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 152 (291)
++|+.||.|++||+........ ..+..+........+.+............+.+.+|+++... .....+..|.
T Consensus 198 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 277 (430)
T 2xyi_A 198 LSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT 277 (430)
T ss_dssp EEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS
T ss_pred EEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC
Confidence 9999999999999987432110 01122333444555554334444455566778888887663 2233333554
Q ss_pred C----cccCCCCCcEEEEecCCcCeEEEEeCCC-cceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEee
Q 022870 153 K----DDVPAEGPKYMAVAGEQLSEVEIWDLNT-AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG 227 (291)
Q Consensus 153 ~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g 227 (291)
. ++|+|+++++++ +|+.||.|++||+++ .+++..+. +| ...+.++. |+|++ ..+|+++
T Consensus 278 ~~v~~i~~~p~~~~~l~-tg~~dg~v~vwd~~~~~~~~~~~~--------~h----~~~v~~i~-~sp~~---~~~l~s~ 340 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILA-TGSADKTVALWDLRNLKLKLHSFE--------SH----KDEIFQVQ-WSPHN---ETILASS 340 (430)
T ss_dssp SCEEEEEECSSCTTEEE-EEETTSEEEEEETTCTTSCSEEEE--------CC----SSCEEEEE-ECSSC---TTEEEEE
T ss_pred CCeEEEEeCCCCCCEEE-EEeCCCeEEEEeCCCCCCCeEEee--------cC----CCCEEEEE-ECCCC---CCEEEEE
Confidence 4 899999988776 566799999999998 45667776 55 44677887 99983 3379999
Q ss_pred cCCCcEEEEEccCCC-------------CceeeccccccceeEEEeecCCC-eeEEecCCCeEEEEEcCCCc
Q 022870 228 YEDGSILVWDIRNPG-------------IPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 228 ~~dg~i~vwd~~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~dg~i~vw~~~~~~ 285 (291)
+.||.|++||++..+ +.+..+.+|...|++++|+|++. +|++++.||.|++|++....
T Consensus 341 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 341 GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp ETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred eCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 999999999998622 55677788999999999999999 89999999999999997543
No 63
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-34 Score=248.12 Aligned_cols=256 Identities=16% Similarity=0.162 Sum_probs=186.0
Q ss_pred eEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCC--CCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeE
Q 022870 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i 88 (291)
+.++.+|.++|++++|+|++++|++|+.||.|++||+. +++.+..+..|... |.+++|+|..++++|++|+.||.|
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~--V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGP--VWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSC--EEEEEECCTTSCSEEEEEETTSCE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCc--eEEEEecCCCCCCEEEEEeCCCeE
Confidence 45789999999999999999999999999999999987 45677788888755 999999982228999999999999
Q ss_pred EEEECCCCCCCCCCccccccceEEEEEeeccc-CccceeccCCCCceeeecccCcc-ccccCCCCCC----cccCCC---
Q 022870 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK-EPYANAKQANEPKDCYEREVGET-VDTDSLCDSK----DDVPAE--- 159 (291)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~--- 159 (291)
++||+.+++.........+........+++.. ..........+...+|++..... ......+|.. ++|+|.
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc
Confidence 99999987521111222333445555555442 22344445566778888876632 2223344544 889984
Q ss_pred ----------CCcEEEEecCCcCeEEEEeCCCcc----eeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEE
Q 022870 160 ----------GPKYMAVAGEQLSEVEIWDLNTAE----RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVL 225 (291)
Q Consensus 160 ----------~~~~~~~~g~~d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~ 225 (291)
+..++ +|+.||.|++||++++. ....+. +| ...+.++. |+|++..+. +|+
T Consensus 160 ~~~~~~~~~d~~~l~--sgs~dg~I~iwd~~~~~~~~~~~~~~~--------~h----~~~V~~l~-~sp~~~~~~-~l~ 223 (753)
T 3jro_A 160 EDGEHNGTKESRKFV--TGGADNLVKIWKYNSDAQTYVLESTLE--------GH----SDWVRDVA-WSPTVLLRS-YLA 223 (753)
T ss_dssp -------CGGGCCEE--EEETTSCEEEEEEETTTTEEEEEEEEC--------CC----SSCEEEEE-ECCCCSSSE-EEE
T ss_pred cccccccCCCCCEEE--EEECCCeEEEEeccCCcccceeeeeec--------CC----CCcEEEEE-eccCCCCCC-EEE
Confidence 55444 56679999999998874 334444 45 44678887 999831133 999
Q ss_pred eecCCCcEEEEEccCCCC----ceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCC
Q 022870 226 AGYEDGSILVWDIRNPGI----PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 226 ~g~~dg~i~vwd~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~ 284 (291)
+|+.||.|++||+++... .......|...|++++|+|++.+|++++.||.|++|+++.+
T Consensus 224 s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 224 SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp EEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred EEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 999999999999987321 34445568899999999999999999999999999999854
No 64
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.1e-34 Score=230.22 Aligned_cols=247 Identities=13% Similarity=0.098 Sum_probs=172.9
Q ss_pred EecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCC--eEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEE
Q 022870 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH--RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (291)
Q Consensus 13 ~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~i 90 (291)
.++.|.++|++++|+|++++|++|+.|+.|++||+.++ +.+..+..|... |.+++|+| ++++|++++.|++|++
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~--v~~~~~s~--~~~~l~s~s~d~~v~v 81 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKI--VTCVDWAP--KSNRIVTCSQDRNAYV 81 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSC--EEEEEECT--TTCCEEEEETTSSEEE
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCce--EEEEEEeC--CCCEEEEEeCCCeEEE
Confidence 34557789999999999999999999999999999988 677788888855 99999999 9999999999999999
Q ss_pred EECCCCC-CCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCcc--ccccCCC-CCC----cccCCCCCc
Q 022870 91 WDIENGG-LSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGET--VDTDSLC-DSK----DDVPAEGPK 162 (291)
Q Consensus 91 wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~----~~~~~~~~~ 162 (291)
||+.+++ .........+........+++... ........+...+|+++.... ....+.. |.. ++|+|++..
T Consensus 82 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 82 YEKRPDGTWKQTLVLLRLNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp C------CCCCEEECCCCSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred EEcCCCCceeeeeEecccCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 9999876 211111122333444444444322 223334456677788776653 2333344 555 899999875
Q ss_pred EEEEecCCcCeEEEEeCCCccee--------------eEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeec
Q 022870 163 YMAVAGEQLSEVEIWDLNTAERC--------------TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY 228 (291)
Q Consensus 163 ~~~~~g~~d~~i~~wd~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~ 228 (291)
++ +++.|+.|++||++..+.. ..... .. .....+.++. |+|+ ++ +|++|+
T Consensus 161 l~--~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~~~v~~~~-~sp~---~~-~l~~~~ 224 (377)
T 3dwl_C 161 LA--AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCA-------EY--PSGGWVHAVG-FSPS---GN-ALAYAG 224 (377)
T ss_dssp EE--EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEE-------CC--CCSSSEEEEE-ECTT---SS-CEEEEE
T ss_pred EE--EEeCCCEEEEEEEEecccCCCccccccccccchhhhhh-------cc--cCCceEEEEE-ECCC---CC-EEEEEe
Confidence 54 5667999999999643211 11110 00 2345678887 9998 44 899999
Q ss_pred CCCcEEEEEccCCCCc----eeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcC
Q 022870 229 EDGSILVWDIRNPGIP----LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (291)
Q Consensus 229 ~dg~i~vwd~~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~ 282 (291)
.||.|++||+++ ++. +..+.+|...|.+++|+|++++|++++.|+.+ +|+..
T Consensus 225 ~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 225 HDSSVTIAYPSA-PEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp TTTEEC-CEECS-TTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CCCcEEEEECCC-CCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 999999999998 655 78899999999999999999999999877666 66665
No 65
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.8e-32 Score=230.38 Aligned_cols=249 Identities=18% Similarity=0.275 Sum_probs=188.2
Q ss_pred CCCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC
Q 022870 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (291)
Q Consensus 7 ~~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (291)
..+.+..+.+|...|++++|+|++.+|++++.|++|++||.. ++.+..+..|... |.+++|+| ++.+|++++.||
T Consensus 292 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~--v~~~~~s~--~g~~l~~~~~dg 366 (577)
T 2ymu_A 292 NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSS--VWGVAFSP--DGQTIASASDDK 366 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSC--EEEEEECT--TSSEEEEEETTS
T ss_pred CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCC--EEEEEECC--CCCEEEEEeCCC
Confidence 346678899999999999999999999999999999999976 4556677778754 99999999 999999999999
Q ss_pred eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCc
Q 022870 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPK 162 (291)
Q Consensus 87 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 162 (291)
.|++||... +... .+..+........+++...... .........+|+... .....+.+|.. ++|+|++..
T Consensus 367 ~v~~~~~~~-~~~~--~~~~~~~~v~~~~~s~dg~~l~-~~~~d~~v~~~~~~~--~~~~~~~~~~~~v~~~~~s~d~~~ 440 (577)
T 2ymu_A 367 TVKLWNRNG-QLLQ--TLTGHSSSVRGVAFSPDGQTIA-SASDDKTVKLWNRNG--QLLQTLTGHSSSVWGVAFSPDDQT 440 (577)
T ss_dssp EEEEEETTC-CEEE--EEECCSSCEEEEEECTTSSCEE-EEETTSEEEEECTTC--CEEEEEECCSSCEEEEEECTTSSE
T ss_pred EEEEEcCCC-CEEE--EecCCCCCeEEEEECCCCCEEE-EEeCCCEEEEEeCCC--CEEEEecCCCCCeEEEEECCCCCE
Confidence 999999643 3221 1222333444444444332222 222334455666432 22233445555 899999976
Q ss_pred EEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCC
Q 022870 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (291)
Q Consensus 163 ~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~ 242 (291)
++ +++.|+.|++||.. ++.+..+. +|. ..+.+++ |+|+ ++ +|++++.|+.|++||.. +
T Consensus 441 l~--~~~~d~~v~~w~~~-~~~~~~~~--------~~~----~~v~~~~-~spd---~~-~las~~~d~~i~iw~~~--~ 498 (577)
T 2ymu_A 441 IA--SASDDKTVKLWNRN-GQLLQTLT--------GHS----SSVRGVA-FSPD---GQ-TIASASDDKTVKLWNRN--G 498 (577)
T ss_dssp EE--EEETTSEEEEEETT-SCEEEEEE--------CCS----SCEEEEE-ECTT---SC-EEEEEETTSEEEEEETT--S
T ss_pred EE--EEcCCCEEEEEECC-CCEEEEEc--------CCC----CCEEEEE-EcCC---CC-EEEEEeCCCEEEEEcCC--C
Confidence 54 56679999999974 56667776 563 4567776 9998 44 99999999999999964 7
Q ss_pred CceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 243 IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 243 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
+++..+.+|...|++++|+|++++|++++.||.|++||.. ++++++
T Consensus 499 ~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~~~~~~ 544 (577)
T 2ymu_A 499 QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQT 544 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SCEEEE
T ss_pred CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC-CCEEEE
Confidence 8899999999999999999999999999999999999964 555544
No 66
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.3e-32 Score=223.94 Aligned_cols=213 Identities=17% Similarity=0.287 Sum_probs=169.0
Q ss_pred CceEEecCCccceeEEEEcC-CCCEEEEecCCCeEEEEeCCCC-------eEEEEEeeecCCcceEEEEEeecCCC-CeE
Q 022870 9 DPVAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQH-------RTVSSSWVHSAAHGIVSVATGPSIGL-NKV 79 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~iwd~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l 79 (291)
+.+..+.+|.+.|++++|+| ++.+|++|+.||+|++||+.++ +.+..+..|... |.+++|+| ++ ++|
T Consensus 72 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~--v~~~~~~p--~~~~~l 147 (402)
T 2aq5_A 72 KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKR--VGIVAWHP--TAQNVL 147 (402)
T ss_dssp TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSC--EEEEEECS--SBTTEE
T ss_pred CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCe--EEEEEECc--CCCCEE
Confidence 34567889999999999999 9999999999999999999887 567788888855 99999999 87 699
Q ss_pred EEEeCCCeEEEEECCCCCCCCCCcccc--ccceE-EEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCccc
Q 022870 80 ISQGRDGTVKCWDIENGGLSSNPSLTI--KTNSY-HFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDV 156 (291)
Q Consensus 80 ~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (291)
++++.||.|++||+++++... .+ ..+.. ..+ ++|
T Consensus 148 ~s~~~dg~i~iwd~~~~~~~~----~~~~~~~~~~v~~---------------------------------------~~~ 184 (402)
T 2aq5_A 148 LSAGCDNVILVWDVGTGAAVL----TLGPDVHPDTIYS---------------------------------------VDW 184 (402)
T ss_dssp EEEETTSCEEEEETTTTEEEE----EECTTTCCSCEEE---------------------------------------EEE
T ss_pred EEEcCCCEEEEEECCCCCccE----EEecCCCCCceEE---------------------------------------EEE
Confidence 999999999999999875422 22 11110 001 669
Q ss_pred CCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEee---cCCCcE
Q 022870 157 PAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG---YEDGSI 233 (291)
Q Consensus 157 ~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g---~~dg~i 233 (291)
+|++..++ +++.|+.|++||+++++.+..+.. +|.. ..+..+. |+|+ ++ +|++| +.|+.|
T Consensus 185 ~~~~~~l~--~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~---~~~~~~~-~~~~---~~-~l~~g~~~~~d~~i 247 (402)
T 2aq5_A 185 SRDGALIC--TSCRDKRVRVIEPRKGTVVAEKDR-------PHEG---TRPVHAV-FVSE---GK-ILTTGFSRMSERQV 247 (402)
T ss_dssp CTTSSCEE--EEETTSEEEEEETTTTEEEEEEEC-------SSCS---SSCCEEE-ECST---TE-EEEEEECTTCCEEE
T ss_pred CCCCCEEE--EEecCCcEEEEeCCCCceeeeecc-------CCCC---CcceEEE-EcCC---Cc-EEEEeccCCCCceE
Confidence 99987665 566799999999999998888732 4532 2355565 9997 54 88888 799999
Q ss_pred EEEEccCCCCceeecc-ccccceeEEEeecCCCeeE-EecCCCeEEEEEcCCCc
Q 022870 234 LVWDIRNPGIPLTAMK-VHLEPVLCLSIDESCNGGI-SGGADQKIVLYNLDHST 285 (291)
Q Consensus 234 ~vwd~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~-s~s~dg~i~vw~~~~~~ 285 (291)
++||+++...++.... .|...+.+++|+|++.+|+ +|+.||.|++||+++++
T Consensus 248 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 248 ALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred EEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 9999998444444443 5678899999999999986 56679999999999887
No 67
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.3e-33 Score=222.94 Aligned_cols=251 Identities=17% Similarity=0.196 Sum_probs=181.6
Q ss_pred CCccceeEEEEcCC---CCEEEEecCCCeEEEEeCCCCe-EEEEEeeecCCcceEEEEE------eecCCCCeEEEEeCC
Q 022870 16 GHRASVTDVCFHQT---KPILFAGTTGGELRIWDTVQHR-TVSSSWVHSAAHGIVSVAT------GPSIGLNKVISQGRD 85 (291)
Q Consensus 16 ~h~~~v~~l~~~~~---~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~v~~~~~------~~~~~~~~l~s~~~d 85 (291)
+|..+|++++|+|+ +.+|++|+.||.|++||+.+++ .+..+..|... |.++.| +| ++++|++++.|
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~s~--~~~~l~~~~~d 138 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEI--INAIDGIGGLGIGE--GAPEIVTGSRD 138 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSC--EEEEEEESGGGCC---CCCEEEEEETT
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccc--eEEEeeccccccCC--CccEEEEEeCC
Confidence 79999999999998 6999999999999999999887 88888888855 999965 56 88999999999
Q ss_pred CeEEEEECCCCCCCCCCcccccc----ceEEEEEeecccCcc---ceeccCCCCceeeecccCccccccCCCCCC----c
Q 022870 86 GTVKCWDIENGGLSSNPSLTIKT----NSYHFCKLSLVKEPY---ANAKQANEPKDCYEREVGETVDTDSLCDSK----D 154 (291)
Q Consensus 86 g~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 154 (291)
|.|++||+++++.... .+.... .......+.+...+. .......+...+|+++....... ..+.. +
T Consensus 139 ~~i~vwd~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~v~~~ 215 (357)
T 3i2n_A 139 GTVKVWDPRQKDDPVA-NMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE--TNIKNGVCSL 215 (357)
T ss_dssp SCEEEECTTSCSSCSE-EECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEE
T ss_pred CeEEEEeCCCCCCcce-eccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee--cCCCCceEEE
Confidence 9999999998762211 111111 133333333222222 22333446677788877664322 22222 8
Q ss_pred ccCC---CCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCC
Q 022870 155 DVPA---EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG 231 (291)
Q Consensus 155 ~~~~---~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg 231 (291)
+|+| ++..++ +++.||.|++||+++++....+.... ..+| ...+.++. |+|+ ++.+|++|+.||
T Consensus 216 ~~~~~~~~~~~l~--~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~~----~~~v~~~~-~~~~---~~~~l~~~~~dg 282 (357)
T 3i2n_A 216 EFDRKDISMNKLV--ATSLEGKFHVFDMRTQHPTKGFASVS---EKAH----KSTVWQVR-HLPQ---NRELFLTAGGAG 282 (357)
T ss_dssp EESCSSSSCCEEE--EEESTTEEEEEEEEEEETTTEEEEEE---EECC----SSCEEEEE-EETT---EEEEEEEEETTS
T ss_pred EcCCCCCCCCEEE--EECCCCeEEEEeCcCCCcccceeeec---cCCC----cCCEEEEE-ECCC---CCcEEEEEeCCC
Confidence 9999 776554 45669999999999876654443100 0023 45677887 9997 444799999999
Q ss_pred cEEEEEccCCC------------------CceeeccccccceeEEEeecCCCeeE-EecCCCeEEEEEcCCCce
Q 022870 232 SILVWDIRNPG------------------IPLTAMKVHLEPVLCLSIDESCNGGI-SGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 232 ~i~vwd~~~~~------------------~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~dg~i~vw~~~~~~~ 286 (291)
.|++||+++.. +++..+.+|...|++++|+|++++|+ +++.||.|++||+.+..+
T Consensus 283 ~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 283 GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred cEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 99999998632 24667888999999999999999998 899999999999998764
No 68
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.6e-31 Score=212.06 Aligned_cols=237 Identities=16% Similarity=0.228 Sum_probs=180.1
Q ss_pred CCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCe--EEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEEC
Q 022870 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 93 (291)
+|...|++++|+|++++|++++.||.|++||+.+++ ....+..|.. .|.+++|+| ++++|++++.||.|++||+
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~--~i~~~~~~~--~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAP--ACYALAISP--DSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSS--CEEEEEECT--TSSEEEEEETTSCEEEEET
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCC--ceEEEEECC--CCCEEEEEeCCCcEEEEeC
Confidence 799999999999999999999999999999999877 5556666664 499999999 9999999999999999999
Q ss_pred CCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC--cccCCCCCcEEEEecCCc
Q 022870 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK--DDVPAEGPKYMAVAGEQL 171 (291)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~d 171 (291)
++++... .+..+........+.+... ........+...+|++............... ++|+|+++.++ +++.|
T Consensus 171 ~~~~~~~--~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~--~~~~~ 245 (337)
T 1gxr_A 171 HNQTLVR--QFQGHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLA--VGMES 245 (337)
T ss_dssp TTTEEEE--EECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEE--EEETT
T ss_pred CCCceee--eeecccCceEEEEECCCCC-EEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEE--EEcCC
Confidence 9876433 2222333444444444332 2223334566777887766544332211111 89999997655 45568
Q ss_pred CeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeecccc
Q 022870 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH 251 (291)
Q Consensus 172 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h 251 (291)
+.|++||+++++.. .+. .| ...+.++. |+|+ ++ +|++++.||.|++||+++ ++.+.. ..|
T Consensus 246 ~~i~~~~~~~~~~~-~~~--------~~----~~~v~~~~-~~~~---~~-~l~~~~~dg~i~~~~~~~-~~~~~~-~~~ 305 (337)
T 1gxr_A 246 SNVEVLHVNKPDKY-QLH--------LH----ESCVLSLK-FAYC---GK-WFVSTGKDNLLNAWRTPY-GASIFQ-SKE 305 (337)
T ss_dssp SCEEEEETTSSCEE-EEC--------CC----SSCEEEEE-ECTT---SS-EEEEEETTSEEEEEETTT-CCEEEE-EEC
T ss_pred CcEEEEECCCCCeE-EEc--------CC----ccceeEEE-ECCC---CC-EEEEecCCCcEEEEECCC-CeEEEE-ecC
Confidence 99999999988654 333 34 44677787 9998 44 899999999999999998 666543 457
Q ss_pred ccceeEEEeecCCCeeEEecCCCeEEEEEc
Q 022870 252 LEPVLCLSIDESCNGGISGGADQKIVLYNL 281 (291)
Q Consensus 252 ~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~ 281 (291)
...|.+++|+|++++|++++.||.|++|++
T Consensus 306 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 306 SSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 899999999999999999999999999996
No 69
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.2e-32 Score=220.21 Aligned_cols=242 Identities=12% Similarity=0.086 Sum_probs=167.9
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeE-EEEeCCCe
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDGT 87 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~ 87 (291)
+++..+.+|.+.|++++|+|+|++|++|+.|+ +++||+++++.......+ .+..+++.+ +++.+ ++++.|++
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~d~~ 82 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR----HLSKVRMLH--RTNYVAFVTGVKEV 82 (355)
T ss_dssp ---------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS----CCCEEEECT--TSSEEEEECSSTTE
T ss_pred CCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC----CeEEEEEcC--CCCEEEEEECCccE
Confidence 45667789999999999999999999998775 789999877666543322 277788888 66666 57888899
Q ss_pred EEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccC-ccccccCCCCCC-cccCCCCCcEEE
Q 022870 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVG-ETVDTDSLCDSK-DDVPAEGPKYMA 165 (291)
Q Consensus 88 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~ 165 (291)
|++||..+++... .+... ....... ..+............+|++... +.... +..... .++++ ..+++
T Consensus 83 v~iWd~~~~~~~~--~~~~~-~~v~~v~----~~~~~~~~~~~~~i~i~d~~~~~~~~~~-~~~~~~~~~~s~--~~la~ 152 (355)
T 3vu4_A 83 VHIWDDVKKQDVS--RIKVD-APVKDLF----LSREFIVVSYGDVISVFKFGNPWKRITD-DIRFGGVCEFSN--GLLVY 152 (355)
T ss_dssp EEEEETTTTEEEE--EEECS-SCEEEEE----ECSSEEEEEETTEEEEEESSTTCCBSSC-CEEEEEEEEEET--TEEEE
T ss_pred EEEEECCCCcEEE--EEECC-CceEEEE----EcCCEEEEEEcCEEEEEECCCCceeeEE-eccCCceEEEEc--cEEEE
Confidence 9999999886543 11211 1222222 2223333334556777777665 32221 111111 56666 33433
Q ss_pred EecCCcCeEEEEeCCCcce----------------eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecC
Q 022870 166 VAGEQLSEVEIWDLNTAER----------------CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 229 (291)
Q Consensus 166 ~~g~~d~~i~~wd~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~ 229 (291)
++|+.||.|++||+++++. +..+. +| ...+.+++ |+|+ |+ +|++|+.
T Consensus 153 ~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~--------~h----~~~v~~~~-~s~~---g~-~l~s~s~ 215 (355)
T 3vu4_A 153 SNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK--------AH----TNPIKMVR-LNRK---SD-MVATCSQ 215 (355)
T ss_dssp EESSCTTCEEEEECCC------------------CCEEEC--------CC----SSCEEEEE-ECTT---SS-EEEEEET
T ss_pred eCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE--------cc----CCceEEEE-ECCC---CC-EEEEEeC
Confidence 3388899999999998651 44555 56 45678887 9998 44 9999999
Q ss_pred CCc-EEEEEccCCCCceeecc-c-cccceeEEEeecCCCeeEEecCCCeEEEEEcCCCc
Q 022870 230 DGS-ILVWDIRNPGIPLTAMK-V-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 230 dg~-i~vwd~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~ 285 (291)
||. |++||+++ ++++..+. + |...|++++|+|++++|++++.|+.|++||++.+.
T Consensus 216 d~~~v~iwd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 216 DGTIIRVFKTED-GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp TCSEEEEEETTT-CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCEEEEEECCC-CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 998 99999998 88888888 5 99999999999999999999999999999998653
No 70
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=8.4e-32 Score=216.14 Aligned_cols=264 Identities=14% Similarity=0.166 Sum_probs=185.6
Q ss_pred CCCCceEEecCCccceeEEEEcCC---CCEEEEecCCCeEEEEeCCC-CeEE-EEEeeecCCcceEEEEEeecCCCCeEE
Q 022870 6 PPPDPVAVLRGHRASVTDVCFHQT---KPILFAGTTGGELRIWDTVQ-HRTV-SSSWVHSAAHGIVSVATGPSIGLNKVI 80 (291)
Q Consensus 6 ~~~~~~~~l~~h~~~v~~l~~~~~---~~~l~s~~~dg~v~iwd~~~-~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~l~ 80 (291)
.|.+.+..+.+|.+.|++++|+|+ |.+|++|+.||.|++||+.+ +..+ ..+..|... |.+++|+| ++++|+
T Consensus 27 ~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~ 102 (368)
T 3mmy_A 27 NPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGP--VLDVCWSD--DGSKVF 102 (368)
T ss_dssp CTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSC--EEEEEECT--TSSEEE
T ss_pred CCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCC--EEEEEECc--CCCEEE
Confidence 456788899999999999999998 69999999999999999987 5444 677788755 99999999 999999
Q ss_pred EEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCc-cceeccCCCCceeeecccCccccccCCCCCC-cccCC
Q 022870 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEP-YANAKQANEPKDCYEREVGETVDTDSLCDSK-DDVPA 158 (291)
Q Consensus 81 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 158 (291)
+++.||.|++||+++++... ...+........+...... ........+...+|++......... ..+.. .++.+
T Consensus 103 s~~~dg~v~iwd~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~~~~ 178 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQ---IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVL-QLPERCYCADV 178 (368)
T ss_dssp EEETTSEEEEEETTTTEEEE---EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEE-ECSSCEEEEEE
T ss_pred EEcCCCcEEEEEcCCCCcee---eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEE-ecCCCceEEEe
Confidence 99999999999999876432 1222333344433212222 2333344566777887765533322 22223 34444
Q ss_pred CCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEc
Q 022870 159 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 238 (291)
Q Consensus 159 ~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~ 238 (291)
....+++ +..++.+++||++.......... ........+.++. +.+.. ....+++|+.||.|++||+
T Consensus 179 ~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~dg~i~i~~~ 245 (368)
T 3mmy_A 179 IYPMAVV--ATAERGLIVYQLENQPSEFRRIE--------SPLKHQHRCVAIF-KDKQN--KPTGFALGSIEGRVAIHYI 245 (368)
T ss_dssp ETTEEEE--EEGGGCEEEEECSSSCEEEEECC--------CSCSSCEEEEEEE-ECTTS--CEEEEEEEETTSEEEEEES
T ss_pred cCCeeEE--EeCCCcEEEEEeccccchhhhcc--------ccccCCCceEEEc-ccCCC--CCCeEEEecCCCcEEEEec
Confidence 4444443 34478999999987655443331 1111233344333 33321 1115999999999999999
Q ss_pred cCCC--Cceeecccccc------------ceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 239 RNPG--IPLTAMKVHLE------------PVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 239 ~~~~--~~~~~~~~h~~------------~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+... ..+..+.+|.. .|++++|+|++++|++++.||.|++||+++++.+..+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 311 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS 311 (368)
T ss_dssp SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred CCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe
Confidence 8722 45667777776 7999999999999999999999999999999887654
No 71
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.4e-32 Score=219.86 Aligned_cols=252 Identities=12% Similarity=0.037 Sum_probs=184.7
Q ss_pred ceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEE--eeecCCcceEEEEEeecCCCCeEEEEeCCCe
Q 022870 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSS--WVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (291)
Q Consensus 10 ~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (291)
++..+.+|...|++++|+|++++|++++.||.|++||+++++....+ ..|. ..|.+++|+| ++++|++++.|+.
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~l~~~~~d~~ 119 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRIN--RAARCVRWAP--NEKKFAVGSGSRV 119 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCS--SCEEEEEECT--TSSEEEEEETTSS
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCC--CceeEEEECC--CCCEEEEEeCCCE
Confidence 67889999999999999999999999999999999999888765554 3455 5599999999 9999999999999
Q ss_pred EEEEECCCCCCCC--CCccccccceEEEEEeecccCccceeccCCCCceeeeccc-----------------CccccccC
Q 022870 88 VKCWDIENGGLSS--NPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV-----------------GETVDTDS 148 (291)
Q Consensus 88 i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~ 148 (291)
|++||++...... ......+........+.+... ........+...+|++.. .......+
T Consensus 120 v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (372)
T 1k8k_C 120 ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES 198 (372)
T ss_dssp EEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC
T ss_pred EEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC-EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEec
Confidence 9999998765211 001111223344444444322 222334456677787531 12223334
Q ss_pred CCCCC----cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEE
Q 022870 149 LCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNV 224 (291)
Q Consensus 149 ~~~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l 224 (291)
..|.. ++|+|++..++ +++.|+.|++||+++++.+..+. .| ...+.++. |+|+ ++ ++
T Consensus 199 ~~~~~~v~~~~~~~~~~~l~--~~~~d~~i~i~d~~~~~~~~~~~--------~~----~~~v~~~~-~~~~---~~-~l 259 (372)
T 1k8k_C 199 SSSCGWVHGVCFSANGSRVA--WVSHDSTVCLADADKKMAVATLA--------SE----TLPLLAVT-FITE---SS-LV 259 (372)
T ss_dssp CCCSSCEEEEEECSSSSEEE--EEETTTEEEEEEGGGTTEEEEEE--------CS----SCCEEEEE-EEET---TE-EE
T ss_pred CCCCCeEEEEEECCCCCEEE--EEeCCCEEEEEECCCCceeEEEc--------cC----CCCeEEEE-EecC---CC-EE
Confidence 45544 89999997555 56679999999999999988887 55 33567776 9997 44 67
Q ss_pred EeecCCCcEEEEEccC--CC-------------------------------Cce------eec-cccccceeEEEee-cC
Q 022870 225 LAGYEDGSILVWDIRN--PG-------------------------------IPL------TAM-KVHLEPVLCLSID-ES 263 (291)
Q Consensus 225 ~~g~~dg~i~vwd~~~--~~-------------------------------~~~------~~~-~~h~~~v~~~~~~-~~ 263 (291)
++| .|+.|++||+++ +. ... ..+ .+|...|++++|. ++
T Consensus 260 ~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 338 (372)
T 1k8k_C 260 AAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGG 338 (372)
T ss_dssp EEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEEST
T ss_pred EEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCC
Confidence 777 899999999986 10 000 233 4899999999975 66
Q ss_pred C---CeeEEecCCCeEEEEEcCCCce
Q 022870 264 C---NGGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 264 ~---~~l~s~s~dg~i~vw~~~~~~~ 286 (291)
+ .+|++|+.||.|++|++++++.
T Consensus 339 g~~~~~l~s~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 339 KAKCSQFCTTGMDGGMSIWDVRSLES 364 (372)
T ss_dssp TTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred CcceeeEEEecCCCceEEEEecChhH
Confidence 6 8999999999999999987543
No 72
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=6e-33 Score=222.73 Aligned_cols=257 Identities=11% Similarity=0.107 Sum_probs=187.4
Q ss_pred EecCCccceeEEEEcCC----CCEEEEecCCCeEEEEeCCCCeEEEEEeeec---CCcceEEEEEeecCC----CCeEEE
Q 022870 13 VLRGHRASVTDVCFHQT----KPILFAGTTGGELRIWDTVQHRTVSSSWVHS---AAHGIVSVATGPSIG----LNKVIS 81 (291)
Q Consensus 13 ~l~~h~~~v~~l~~~~~----~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~----~~~l~s 81 (291)
...+|.++|++++|+|+ ...+++++.++.|++||+.+++.+..+..+. +...|.+++|+| + +.+|++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~l~~ 90 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTY--DSNTSHPLLAV 90 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEE--CTTTCCEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEecc--CCCCCCCEEEE
Confidence 44589999999999984 4466667777799999999888777776554 225599999999 6 568999
Q ss_pred EeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCcccccc--CCCCCC----cc
Q 022870 82 QGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTD--SLCDSK----DD 155 (291)
Q Consensus 82 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~ 155 (291)
|+.||.|++||+.+++... .+..+........+.+............+...+|++......... +..|.. ++
T Consensus 91 ~~~dg~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 168 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIK--HYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSAD 168 (366)
T ss_dssp EETTCEEEEECTTTCCEEE--EEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEE
T ss_pred ecCCCEEEEEEchhceEee--eecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEE
Confidence 9999999999999876543 223334445555555422333444555677888998876644432 244544 89
Q ss_pred cCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccc--------------------cCCCCCCCCCcceeeeeEEEecC
Q 022870 156 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNS--------------------CGGSPNFSSKGRGMCMAVQAYLP 215 (291)
Q Consensus 156 ~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~p 215 (291)
|+|++..++ +++.|+.|++||+++++....+.... .....+| ...+.++. |++
T Consensus 169 ~~~~~~~l~--~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~-~~~ 241 (366)
T 3k26_A 169 YDLLGEKIM--SCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIH----RNYVDCVR-WLG 241 (366)
T ss_dssp ECTTSSEEE--EEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSC----SSCCCEEE-EET
T ss_pred ECCCCCEEE--EecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCC----cceEEEEE-EcC
Confidence 999987655 56669999999999876554332100 0000013 44566776 873
Q ss_pred CCCCCceEEEeecCCCcEEEEEccCCCC-------------ceeeccccccceeEEEeecC--CCeeEEecCCCeEEEEE
Q 022870 216 SKSQGFVNVLAGYEDGSILVWDIRNPGI-------------PLTAMKVHLEPVLCLSIDES--CNGGISGGADQKIVLYN 280 (291)
Q Consensus 216 ~~~~g~~~l~~g~~dg~i~vwd~~~~~~-------------~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~dg~i~vw~ 280 (291)
+ +|++++.||.|++||+++... .+..+..|...|++++|+|+ +++|++++.||.|++||
T Consensus 242 ~------~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd 315 (366)
T 3k26_A 242 D------LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWD 315 (366)
T ss_dssp T------EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEE
T ss_pred C------EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEE
Confidence 3 899999999999999987322 26677889999999999999 99999999999999999
Q ss_pred cCCCce
Q 022870 281 LDHSTV 286 (291)
Q Consensus 281 ~~~~~~ 286 (291)
+++++.
T Consensus 316 ~~~~~~ 321 (366)
T 3k26_A 316 LEVEDP 321 (366)
T ss_dssp CCSSSG
T ss_pred CCCCCC
Confidence 998764
No 73
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.1e-32 Score=219.56 Aligned_cols=241 Identities=14% Similarity=0.157 Sum_probs=176.3
Q ss_pred CccceeEEEEcCC----CCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEE
Q 022870 17 HRASVTDVCFHQT----KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (291)
Q Consensus 17 h~~~v~~l~~~~~----~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd 92 (291)
|...|++++|+|+ +.+|++|+.||.|++||+.+++.+..+..|... |.+++|+|. ++.+|++++.||.|++||
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~--i~~~~~~~~-~~~~l~s~~~dg~i~iwd 144 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNA--INELKFHPR-DPNLLLSVSKDHALRLWN 144 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSC--EEEEEECSS-CTTEEEEEETTSCEEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCc--EEEEEECCC-CCCEEEEEeCCCeEEEEE
Confidence 6678999999998 679999999999999999999999999888855 999999984 458999999999999999
Q ss_pred CCCCCCCCCCcc---ccccceEEEEEeecccCccceeccCCCCceeeecccCccccc-----------------------
Q 022870 93 IENGGLSSNPSL---TIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT----------------------- 146 (291)
Q Consensus 93 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 146 (291)
+++++... .+ ..+........+.+... ........+...+|++........
T Consensus 145 ~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (366)
T 3k26_A 145 IQTDTLVA--IFGGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHF 221 (366)
T ss_dssp TTTTEEEE--EECSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECC
T ss_pred eecCeEEE--EecccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeecc
Confidence 99876533 11 12333444444444332 223334456778888775543211
Q ss_pred ----cCCCCCC----cccCCCCCcEEEEecCCcCeEEEEeCCCcce--------------eeEecccccCCCCCCCCCcc
Q 022870 147 ----DSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAER--------------CTRLHQNSCGGSPNFSSKGR 204 (291)
Q Consensus 147 ----~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~--------------~~~~~~~~~~~~~~~~~~~~ 204 (291)
....|.. ++|+ ++ +++ +++.|+.|++||+++.+. +..+. +|.
T Consensus 222 ~~~~~~~~~~~~v~~~~~~--~~-~l~-~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---- 285 (366)
T 3k26_A 222 PDFSTRDIHRNYVDCVRWL--GD-LIL-SKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD--------YSQ---- 285 (366)
T ss_dssp CSEEECSSCSSCCCEEEEE--TT-EEE-EECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE--------CSS----
T ss_pred CccccccCCcceEEEEEEc--CC-EEE-EEecCCEEEEEeCCCccccccccccCCcchheecccc--------ccC----
Confidence 1111333 6666 44 444 566799999999987754 34444 443
Q ss_pred eeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCce----eecccc--ccceeEEEeecCCCeeEEecCCCeEEE
Q 022870 205 GMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL----TAMKVH--LEPVLCLSIDESCNGGISGGADQKIVL 278 (291)
Q Consensus 205 ~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~----~~~~~h--~~~v~~~~~~~~~~~l~s~s~dg~i~v 278 (291)
..+.++. |+|+. +++ +|++|+.||.|++||+++ +++. ..+.+| ...|++++|+|++++|++++.||.|++
T Consensus 286 ~~v~~~~-~s~~~-~~~-~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i 361 (366)
T 3k26_A 286 CDIWYMR-FSMDF-WQK-MLALGNQVGKLYVWDLEV-EDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWR 361 (366)
T ss_dssp CCSSCCC-CEECT-TSS-EEEEECTTSCEEEEECCS-SSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CcEEEEE-EcCCC-CCc-EEEEEecCCcEEEEECCC-CCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEE
Confidence 3455565 88872 133 999999999999999997 5543 367777 789999999999999999999999999
Q ss_pred EEcCC
Q 022870 279 YNLDH 283 (291)
Q Consensus 279 w~~~~ 283 (291)
||+.+
T Consensus 362 wd~~~ 366 (366)
T 3k26_A 362 WDRLR 366 (366)
T ss_dssp EEC--
T ss_pred EEecC
Confidence 99864
No 74
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.4e-32 Score=218.85 Aligned_cols=256 Identities=9% Similarity=0.049 Sum_probs=179.2
Q ss_pred CceEEe--cCCccceeEEEEcC-CCCEEEEecCCCeEEEEeCCCCeEEEEEeeec-CCcceEEEEEeecCCCCeEEEEeC
Q 022870 9 DPVAVL--RGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSWVHS-AAHGIVSVATGPSIGLNKVISQGR 84 (291)
Q Consensus 9 ~~~~~l--~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~ 84 (291)
+....+ .+|...|++++|+| ++.+|++++.|+.|++||+.+ +.+..+..+. ....|.+++|+| ++.+|++++.
T Consensus 107 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~ 183 (383)
T 3ei3_B 107 NKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSV--SRQMLATGDS 183 (383)
T ss_dssp TCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEET--TTTEEEEEET
T ss_pred ccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECC--CCCEEEEECC
Confidence 334444 47999999999999 788999999999999999985 5555554443 224599999999 9999999999
Q ss_pred CCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCcc---ccccCCCCCC----cccC
Q 022870 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGET---VDTDSLCDSK----DDVP 157 (291)
Q Consensus 85 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~~~ 157 (291)
|+.|++||++. +... .+..+........+.+............+...+|++..... ....+ +|.. ++|+
T Consensus 184 d~~i~i~d~~~-~~~~--~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s 259 (383)
T 3ei3_B 184 TGRLLLLGLDG-HEIF--KEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFN 259 (383)
T ss_dssp TSEEEEEETTS-CEEE--EEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEEC
T ss_pred CCCEEEEECCC-CEEE--EeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEc
Confidence 99999999953 2221 22223344455555554433444455566788888876321 11112 3444 8999
Q ss_pred C-CCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCc------ceeeeeEEEecCCCCCCceEEEeecCC
Q 022870 158 A-EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKG------RGMCMAVQAYLPSKSQGFVNVLAGYED 230 (291)
Q Consensus 158 ~-~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~p~~~~g~~~l~~g~~d 230 (291)
| ++..++ +++.|+.|++||+++++....+...... ...|.... .+....+. |+|+ ++ + +|+.|
T Consensus 260 ~~~~~~l~--~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~-~s~d---g~-~--s~s~d 329 (383)
T 3ei3_B 260 PTDSTKLL--TTDQRNEIRVYSSYDWSKPDQIIIHPHR-QFQHLTPIKATWHPMYDLIVAG-RYPD---DQ-L--LLNDK 329 (383)
T ss_dssp TTTSCEEE--EEESSSEEEEEETTBTTSCSEEEECCBC-CCTTSCCCCCEECSSSSEEEEE-CBCC---TT-T--CTTCC
T ss_pred CCCCCEEE--EEcCCCcEEEEECCCCcccccccccccc-ccccccceEEeccCCCCceEEE-ecCC---cc-c--ccCCC
Confidence 9 886554 5666999999999998877666521000 00111111 12233344 6766 43 3 88899
Q ss_pred CcEEEEEccCCCCceeeccc--cccceeEEEeecCCCeeEEecCCCeEEEEEcCC
Q 022870 231 GSILVWDIRNPGIPLTAMKV--HLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (291)
Q Consensus 231 g~i~vwd~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~ 283 (291)
|.|++||+++ ++++..+.+ |...+..++|+|++++|++++ ||.|++||+++
T Consensus 330 ~~i~iwd~~~-~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 330 RTIDIYDANS-GGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CCEEEEETTT-CCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CeEEEEecCC-CceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 9999999998 888888887 457788889999999999997 99999999975
No 75
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.8e-32 Score=219.22 Aligned_cols=251 Identities=14% Similarity=0.120 Sum_probs=187.5
Q ss_pred CCCceEEec--CCccceeE--EEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEee-ecCCcceEEEEEeecCCCCeEEE
Q 022870 7 PPDPVAVLR--GHRASVTD--VCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV-HSAAHGIVSVATGPSIGLNKVIS 81 (291)
Q Consensus 7 ~~~~~~~l~--~h~~~v~~--l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s 81 (291)
|..+...+. +|...+.+ ++|++ ..+++++.||.|++||+.+++....+.. |. ..|.+++|+| ++.+|++
T Consensus 78 ~~~p~~~~~~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~--~~v~~v~~s~--~~~~l~~ 151 (401)
T 4aez_A 78 NTTPERVLDAPGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDES--TYVASVKWSH--DGSFLSV 151 (401)
T ss_dssp CCSCSEEEECTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTT--CCEEEEEECT--TSSEEEE
T ss_pred CCCcceeeeCCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCC--CCEEEEEECC--CCCEEEE
Confidence 434444444 77766544 55554 5688889999999999999998887766 44 5599999999 9999999
Q ss_pred EeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccC
Q 022870 82 QGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVP 157 (291)
Q Consensus 82 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 157 (291)
|+.||.|++||+.+++... .+..+........+ . ..........+...+|+++........+.+|.. ++|+
T Consensus 152 ~~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~--~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 226 (401)
T 4aez_A 152 GLGNGLVDIYDVESQTKLR--TMAGHQARVGCLSW--N-RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWR 226 (401)
T ss_dssp EETTSCEEEEETTTCCEEE--EECCCSSCEEEEEE--E-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC
T ss_pred ECCCCeEEEEECcCCeEEE--EecCCCCceEEEEE--C-CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEc
Confidence 9999999999999876543 22222333333333 2 223344455667788888765555555566655 8999
Q ss_pred CCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeec--CCCcEEE
Q 022870 158 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY--EDGSILV 235 (291)
Q Consensus 158 ~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~--~dg~i~v 235 (291)
|++..++ +|+.|+.|++||+++++....+. .| ...+.++. |+|++ ..++++|+ .|+.|++
T Consensus 227 ~~~~~l~--s~~~d~~v~iwd~~~~~~~~~~~--------~~----~~~v~~~~-~~p~~---~~ll~~~~gs~d~~i~i 288 (401)
T 4aez_A 227 SDGLQLA--SGGNDNVVQIWDARSSIPKFTKT--------NH----NAAVKAVA-WCPWQ---SNLLATGGGTMDKQIHF 288 (401)
T ss_dssp TTSSEEE--EEETTSCEEEEETTCSSEEEEEC--------CC----SSCCCEEE-ECTTS---TTEEEEECCTTTCEEEE
T ss_pred CCCCEEE--EEeCCCeEEEccCCCCCccEEec--------CC----cceEEEEE-ECCCC---CCEEEEecCCCCCEEEE
Confidence 9887554 56679999999999998888887 45 34566776 99973 22777765 8999999
Q ss_pred EEccCCCCceeeccccccceeEEEeecCCCeeEE--ecCCCeEEEEEcCCCceee
Q 022870 236 WDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS--GGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 236 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--~s~dg~i~vw~~~~~~~~~ 288 (291)
||+++ ++++..+. |...|.+++|+|++++|++ |+.||.|++||+++++...
T Consensus 289 ~d~~~-~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~ 341 (401)
T 4aez_A 289 WNAAT-GARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTK 341 (401)
T ss_dssp EETTT-CCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEE
T ss_pred EECCC-CCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcccee
Confidence 99998 78887776 5678999999999999998 5589999999999876554
No 76
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9.7e-32 Score=246.78 Aligned_cols=259 Identities=12% Similarity=0.197 Sum_probs=200.3
Q ss_pred ceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEE
Q 022870 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (291)
Q Consensus 10 ~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~ 89 (291)
....+.+|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+..|... |.+++|+| ++++|++++.||+|+
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~--v~~~~~s~--~~~~l~s~~~d~~v~ 682 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDE--VLCCAFSS--DDSYIATCSADKKVK 682 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC--EEEEEECT--TSSEEEEEETTSEEE
T ss_pred ceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCC--EEEEEEec--CCCEEEEEeCCCeEE
Confidence 45578899999999999999999999999999999999999999999988855 99999999 999999999999999
Q ss_pred EEECCCCCCCCCCccccccceEEEEEeecccCcc-ceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCcEE
Q 022870 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPY-ANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYM 164 (291)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 164 (291)
+||+.+++... .+..+........+.+..... .......+...+|++....... .+.+|.. ++|+|+++.++
T Consensus 683 vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~-~~~~h~~~v~~~~~sp~~~~l~ 759 (1249)
T 3sfz_A 683 IWDSATGKLVH--TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN-TMFGHTNSVNHCRFSPDDELLA 759 (1249)
T ss_dssp EEETTTCCEEE--EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE-EECCCSSCEEEEEECSSTTEEE
T ss_pred EEECCCCceEE--EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh-eecCCCCCEEEEEEecCCCEEE
Confidence 99999886544 233344445555555433322 3344455678888887766443 3445555 89999997555
Q ss_pred EEecCCcCeEEEEeCCCcceeeEecccccCCC--------------CCC-----------------------------CC
Q 022870 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGS--------------PNF-----------------------------SS 201 (291)
Q Consensus 165 ~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~--------------~~~-----------------------------~~ 201 (291)
+++.||.|++||+++++....+........ ... ..
T Consensus 760 --s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~ 837 (1249)
T 3sfz_A 760 --SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHT 837 (1249)
T ss_dssp --EEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred --EEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcC
Confidence 566799999999998876655432110000 000 00
Q ss_pred CcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEc
Q 022870 202 KGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL 281 (291)
Q Consensus 202 ~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~ 281 (291)
.....+.++. |+|+ +. ++++++.||.|++||+.+ +..+..+.+|...|++++|+|++.+|++++.||.|++|++
T Consensus 838 ~~~~~v~~~~-~sp~---~~-~l~~~~~dg~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 838 GHHSTIQYCD-FSPY---DH-LAVIALSQYCVELWNIDS-RLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp SSSSCCCEEE-ECSS---TT-EEEEECSSSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEH
T ss_pred CCCCceEEEE-EcCC---CC-EEEEEeCCCeEEEEEcCC-CceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 1233456666 9987 44 899999999999999998 8889999999999999999999999999999999999997
Q ss_pred CC
Q 022870 282 DH 283 (291)
Q Consensus 282 ~~ 283 (291)
.+
T Consensus 912 ~~ 913 (1249)
T 3sfz_A 912 KK 913 (1249)
T ss_dssp HH
T ss_pred cc
Confidence 64
No 77
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=219.58 Aligned_cols=249 Identities=12% Similarity=0.101 Sum_probs=193.6
Q ss_pred CCCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcc-------------eEEEEEeec
Q 022870 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHG-------------IVSVATGPS 73 (291)
Q Consensus 7 ~~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-------------v~~~~~~~~ 73 (291)
..+.+..+.+|...|++++|+|++++|++++.||.|++||+.+++.+..+..+..... +.++.|+|
T Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 216 (425)
T 1r5m_A 138 TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD- 216 (425)
T ss_dssp TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEE-
T ss_pred CCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC-
Confidence 3467788999999999999999999999999999999999999999888876652111 88999999
Q ss_pred CCCCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC
Q 022870 74 IGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK 153 (291)
Q Consensus 74 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (291)
+ ..+++++.||.|++||+++++... .+..+........+.+... ........+...+|++........ +..|..
T Consensus 217 -~-~~~~~~~~~g~i~~~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~ 290 (425)
T 1r5m_A 217 -D-DKFVIPGPKGAIFVYQITEKTPTG--KLIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGNGNSQNC-FYGHSQ 290 (425)
T ss_dssp -T-TEEEEECGGGCEEEEETTCSSCSE--EECCCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSSBSCSEE-ECCCSS
T ss_pred -C-CEEEEEcCCCeEEEEEcCCCceee--eeccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCccceE-ecCCCc
Confidence 6 679999999999999999876543 2223334444455554432 233344456677888776554333 233443
Q ss_pred ----cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecC
Q 022870 154 ----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 229 (291)
Q Consensus 154 ----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~ 229 (291)
++|+|++ .++ +++.|+.|++||+++++.+..+. .| ...+.++. |+|+ ++ +|++++.
T Consensus 291 ~i~~~~~~~~~--~l~-~~~~d~~i~i~d~~~~~~~~~~~--------~~----~~~i~~~~-~s~~---~~-~l~~~~~ 350 (425)
T 1r5m_A 291 SIVSASWVGDD--KVI-SCSMDGSVRLWSLKQNTLLALSI--------VD----GVPIFAGR-ISQD---GQ-KYAVAFM 350 (425)
T ss_dssp CEEEEEEETTT--EEE-EEETTSEEEEEETTTTEEEEEEE--------CT----TCCEEEEE-ECTT---SS-EEEEEET
T ss_pred cEEEEEECCCC--EEE-EEeCCCcEEEEECCCCcEeEecc--------cC----CccEEEEE-EcCC---CC-EEEEEEC
Confidence 8999998 344 56669999999999999888887 44 34567776 9998 44 8999999
Q ss_pred CCcEEEEEccCCCC--------------------ceeecccccc--ceeEEEeecCCCeeEEecCCCeEEEEEcCC
Q 022870 230 DGSILVWDIRNPGI--------------------PLTAMKVHLE--PVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (291)
Q Consensus 230 dg~i~vwd~~~~~~--------------------~~~~~~~h~~--~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~ 283 (291)
||.|++||+++ .. ++..+.+|.. .|++++|+|++++|++++.||.|++|+++.
T Consensus 351 dg~i~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 351 DGQVNVYDLKK-LNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp TSCEEEEECHH-HHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECCC
T ss_pred CCeEEEEECCC-CccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeecC
Confidence 99999999987 55 7888999976 999999999999999999999999999863
No 78
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.1e-32 Score=222.82 Aligned_cols=214 Identities=14% Similarity=0.180 Sum_probs=164.2
Q ss_pred EecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEE
Q 022870 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (291)
Q Consensus 13 ~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd 92 (291)
.+..| ..+....|++++++|++|+.||.|++||+.+++....+..|... |.+++|+| ++++|++++.|+.|++||
T Consensus 93 ~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~--v~~~~~~~--~~~~l~s~s~d~~i~iwd 167 (420)
T 3vl1_A 93 MLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSE--ITKLKFFP--SGEALISSSQDMQLKIWS 167 (420)
T ss_dssp TSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSC--EEEEEECT--TSSEEEEEETTSEEEEEE
T ss_pred EEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCc--cEEEEECC--CCCEEEEEeCCCeEEEEe
Confidence 34445 44555678999999999999999999999999988887888855 99999999 999999999999999999
Q ss_pred CCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcC
Q 022870 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS 172 (291)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~ 172 (291)
+++++... .+..+...... ++|+|++..++ +++.|+
T Consensus 168 ~~~~~~~~--~~~~h~~~v~~----------------------------------------~~~~~~~~~l~--s~~~d~ 203 (420)
T 3vl1_A 168 VKDGSNPR--TLIGHRATVTD----------------------------------------IAIIDRGRNVL--SASLDG 203 (420)
T ss_dssp TTTCCCCE--EEECCSSCEEE----------------------------------------EEEETTTTEEE--EEETTS
T ss_pred CCCCcCce--EEcCCCCcEEE----------------------------------------EEEcCCCCEEE--EEcCCC
Confidence 99876533 11111111111 56889987655 666799
Q ss_pred eEEEEeCCCcceeeEecccccCCCCCCCCCc-----------------ceeeeeEEEecCCCCCCceEEEeecCCCcEEE
Q 022870 173 EVEIWDLNTAERCTRLHQNSCGGSPNFSSKG-----------------RGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 235 (291)
Q Consensus 173 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~v 235 (291)
.|++||+++++.+..+.... .+.... ...+.++. |+|+ ++ +|++|+.||.|++
T Consensus 204 ~v~iwd~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~---~~-~l~~~~~dg~i~i 273 (420)
T 3vl1_A 204 TIRLWECGTGTTIHTFNRKE-----NPHDGVNSIALFVGTDRQLHEISTSKKNNLE-FGTY---GK-YVIAGHVSGVITV 273 (420)
T ss_dssp CEEEEETTTTEEEEEECBTT-----BTTCCEEEEEEEECCCSSCGGGCCCCCCTTC-SSCT---TE-EEEEEETTSCEEE
T ss_pred cEEEeECCCCceeEEeecCC-----CCCCCccEEEEecCCcceeeecccCcccceE-EcCC---CC-EEEEEcCCCeEEE
Confidence 99999999999888886311 111110 12233344 6776 55 8999999999999
Q ss_pred EEccCCCCceeec-cccccceeEEEeecCCC-eeEEecCCCeEEEEEcCCCce
Q 022870 236 WDIRNPGIPLTAM-KVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 236 wd~~~~~~~~~~~-~~h~~~v~~~~~~~~~~-~l~s~s~dg~i~vw~~~~~~~ 286 (291)
||+++ ++.+..+ ..|...|++++|+|++. +|++|+.||.|++||+++++.
T Consensus 274 ~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 274 HNVFS-KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp EETTT-CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred EECCC-CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 99998 5555444 56889999999999999 999999999999999998754
No 79
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-31 Score=210.18 Aligned_cols=245 Identities=16% Similarity=0.233 Sum_probs=185.8
Q ss_pred CCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCC---eEEEEEeeecCCcceEEEEEeecCCCCeEEEEeC
Q 022870 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH---RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (291)
Q Consensus 8 ~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (291)
.+....+..|...|.+++|+|++.+|++|+.||.|++|++... +.+..+..|... |.++.|.+ +++++++.
T Consensus 49 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~----~~l~~~~~ 122 (313)
T 3odt_A 49 QWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGN--VCSLSFQD----GVVISGSW 122 (313)
T ss_dssp SEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSC--EEEEEEET----TEEEEEET
T ss_pred CEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccC--EEEEEecC----CEEEEEeC
Confidence 3456778889999999999999999999999999999998754 556777778755 99999944 79999999
Q ss_pred CCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCC-CCC----cccCCC
Q 022870 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC-DSK----DDVPAE 159 (291)
Q Consensus 85 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~ 159 (291)
||.|++|| ..+... ....+........+..............+...+|+... ....+.. +.. ++|+|+
T Consensus 123 d~~i~~~d--~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~~i~~~~~~~~ 195 (313)
T 3odt_A 123 DKTAKVWK--EGSLVY--NLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK---VIKTFSGIHNDVVRHLAVVDD 195 (313)
T ss_dssp TSEEEEEE--TTEEEE--EEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE---EEEEECSSCSSCEEEEEEEET
T ss_pred CCCEEEEc--CCcEEE--ecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc---eEEEEeccCcccEEEEEEcCC
Confidence 99999999 222211 22233334444444442333344445556667776322 2222222 333 889999
Q ss_pred CCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEcc
Q 022870 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 239 (291)
Q Consensus 160 ~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~ 239 (291)
+. ++ +++.|+.|++||+++++.+..+. +| ...+.++. |+|+ + .|++++.||.|++||++
T Consensus 196 ~~-~~--~~~~dg~i~i~d~~~~~~~~~~~--------~~----~~~i~~~~-~~~~---~--~l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 196 GH-FI--SCSNDGLIKLVDMHTGDVLRTYE--------GH----ESFVYCIK-LLPN---G--DIVSCGEDRTVRIWSKE 254 (313)
T ss_dssp TE-EE--EEETTSEEEEEETTTCCEEEEEE--------CC----SSCEEEEE-ECTT---S--CEEEEETTSEEEEECTT
T ss_pred Ce-EE--EccCCCeEEEEECCchhhhhhhh--------cC----CceEEEEE-EecC---C--CEEEEecCCEEEEEECC
Confidence 86 33 56679999999999999998887 55 34677787 9998 4 48899999999999999
Q ss_pred CCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceee
Q 022870 240 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 240 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
+ ++++..+..|...|.+++|+|+++ +++++.||.|++||+++++...
T Consensus 255 ~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 255 N-GSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp T-CCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC
T ss_pred C-CceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceee
Confidence 8 889999999999999999999998 6678999999999999887654
No 80
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.3e-32 Score=210.85 Aligned_cols=208 Identities=9% Similarity=0.120 Sum_probs=143.7
Q ss_pred ccceeEEEEcCC----CCEEEEec--------------------CCCeEEEEeC-CCCeEEEEEeeecCCcceEEEEEee
Q 022870 18 RASVTDVCFHQT----KPILFAGT--------------------TGGELRIWDT-VQHRTVSSSWVHSAAHGIVSVATGP 72 (291)
Q Consensus 18 ~~~v~~l~~~~~----~~~l~s~~--------------------~dg~v~iwd~-~~~~~~~~~~~~~~~~~v~~~~~~~ 72 (291)
...|++++|+|+ ++++++++ .|+.|++|++ .+++.+..+..|... +..++|+|
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~--v~~l~fs~ 188 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPE--ETILTFAE 188 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCS--SCEEEEEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCc--eeeEEeec
Confidence 346777788888 77777655 3889999998 458888888888866 77777777
Q ss_pred -cCCCCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEE-EEeecccCccceeccCCCCceeeecccCccccccCCC
Q 022870 73 -SIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHF-CKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC 150 (291)
Q Consensus 73 -~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (291)
..++.+|++++.|++|+|||++++++.. ++..+.... ....
T Consensus 189 ~~g~~~~LaSgS~D~TIkIWDl~TGk~l~----tL~g~~~~v~~v~~--------------------------------- 231 (356)
T 2w18_A 189 VQGMQEALLGTTIMNNIVIWNLKTGQLLK----KMHIDDSYQASVCH--------------------------------- 231 (356)
T ss_dssp EETSTTEEEEEETTSEEEEEETTTCCEEE----EEECCC---CCCEE---------------------------------
T ss_pred cCCCCceEEEecCCCcEEEEECCCCcEEE----EEcCCCcceeeeEE---------------------------------
Confidence 2356899999999999999999987644 332211100 0000
Q ss_pred CCCcccCCCCCcEE----------EEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCC
Q 022870 151 DSKDDVPAEGPKYM----------AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQG 220 (291)
Q Consensus 151 ~~~~~~~~~~~~~~----------~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g 220 (291)
++|+|+|..++ +++|+.|++|++||..+++.+..+.... +.+|... ..+.. ++ +
T Consensus 232 ---vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~---p~Gh~~~----~lsg~-~s-----g 295 (356)
T 2w18_A 232 ---KAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL---PPGQAGR----FLEGD-VK-----D 295 (356)
T ss_dssp ---EEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC---CTTCCCC----EEEEE-EE-----T
T ss_pred ---EEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec---cCCCcce----eEccc-cC-----C
Confidence 34666665442 2478899999999999998876553100 0144332 22332 33 3
Q ss_pred ceEEEeecCCCcEEEEEccCCCCceeecccccccee-EEEeecCCCeeEEecCCCeEEEEEcC
Q 022870 221 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVL-CLSIDESCNGGISGGADQKIVLYNLD 282 (291)
Q Consensus 221 ~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~dg~i~vw~~~ 282 (291)
. ++++|+.|++|+|||+++ ++++.++.+|...+. .++|+|+|++|++|+.|++|+|||+.
T Consensus 296 ~-~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 296 H-CAAAILTSGTIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp T-EEEEEETTSCEEEEETTT-CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred C-EEEEEcCCCcEEEEECCC-CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 3 899999999999999999 899999999988665 58999999999999999999999963
No 81
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-32 Score=226.49 Aligned_cols=250 Identities=12% Similarity=0.041 Sum_probs=176.6
Q ss_pred EEecCCccceeEEEEcCC------CCEEEEecCCCeEEEEeCCCCeE-----------EEEEeeecCCcceEEEEEeecC
Q 022870 12 AVLRGHRASVTDVCFHQT------KPILFAGTTGGELRIWDTVQHRT-----------VSSSWVHSAAHGIVSVATGPSI 74 (291)
Q Consensus 12 ~~l~~h~~~v~~l~~~~~------~~~l~s~~~dg~v~iwd~~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~ 74 (291)
.++.+|.+.|++++|+|+ +.+||+|+.||+|++||+.+++. ...+.+|.. +|++++|++
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~--~v~sv~~s~-- 276 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADS--LITTFDFLS-- 276 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTT--CEEEEEESS--
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCC--CEEEEEecC--
Confidence 456778899999999996 57999999999999999976532 235667774 499999998
Q ss_pred CCCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccC--ccceeccCCCCceeeecccCcccccc---CC
Q 022870 75 GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKE--PYANAKQANEPKDCYEREVGETVDTD---SL 149 (291)
Q Consensus 75 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 149 (291)
+ ..|++|+.||+|++||++++.... ..+..+........+..... .........+...+|+++........ ..
T Consensus 277 ~-~~lasgs~DgtV~lWD~~~~~~~~-~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~ 354 (524)
T 2j04_B 277 P-TTVVCGFKNGFVAEFDLTDPEVPS-FYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFR 354 (524)
T ss_dssp S-SEEEEEETTSEEEEEETTBCSSCS-EEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECS
T ss_pred C-CeEEEEeCCCEEEEEECCCCCCce-EEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccc
Confidence 6 589999999999999999764321 01233333333331122222 23344556677888988765533211 11
Q ss_pred C-C-CCcccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEee
Q 022870 150 C-D-SKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG 227 (291)
Q Consensus 150 ~-~-~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g 227 (291)
. . ..++|+|++..++ +++.|++|++||++++.++..+. +| ...+.+++ |+|+ |+ +|++|
T Consensus 355 ~~~v~~v~fsp~~~~l~--s~~~d~tv~lwd~~~~~~~~~l~--------gH----~~~V~sva-~Sp~---g~-~l~Sg 415 (524)
T 2j04_B 355 GSNLVPVVYCPQIYSYI--YSDGASSLRAVPSRAAFAVHPLV--------SR----ETTITAIG-VSRL---HP-MVLAG 415 (524)
T ss_dssp CCSCCCEEEETTTTEEE--EECSSSEEEEEETTCTTCCEEEE--------EC----SSCEEEEE-CCSS---CC-BCEEE
T ss_pred cCcccceEeCCCcCeEE--EeCCCCcEEEEECcccccceeee--------cC----CCceEEEE-eCCC---CC-eEEEE
Confidence 1 1 1289999987644 56668999999999998888777 56 44678887 9998 44 89999
Q ss_pred cCCCcEEEEEccCC-------------------------------------------CCceeeccccccceeEEEeecCC
Q 022870 228 YEDGSILVWDIRNP-------------------------------------------GIPLTAMKVHLEPVLCLSIDESC 264 (291)
Q Consensus 228 ~~dg~i~vwd~~~~-------------------------------------------~~~~~~~~~h~~~v~~~~~~~~~ 264 (291)
+.||.|++||+... +..+..+.+|...|++++|+|++
T Consensus 416 s~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~ 495 (524)
T 2j04_B 416 SADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETS 495 (524)
T ss_dssp ETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCST
T ss_pred ECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCC
Confidence 99999999985310 01123355688899999999996
Q ss_pred C---eeEEecCCCeEEEEEcCCCce
Q 022870 265 N---GGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 265 ~---~l~s~s~dg~i~vw~~~~~~~ 286 (291)
. .+|+|+.||.|+||+++....
T Consensus 496 ~~~~~lAsg~~~g~vrlw~l~~~~~ 520 (524)
T 2j04_B 496 AGGKCYAFSNSAGLLTLEYLSLEHH 520 (524)
T ss_dssp TTTTEEEEECTTSEEEEEECSCC--
T ss_pred CccHHHHhhccCceEEEEEcccccc
Confidence 4 899999999999999986543
No 82
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.2e-30 Score=215.09 Aligned_cols=246 Identities=18% Similarity=0.349 Sum_probs=189.0
Q ss_pred CCCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC
Q 022870 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (291)
Q Consensus 7 ~~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (291)
..+++.++.+|.+.|++++|+ +.++++|+.||+|++||+.+++.+..+..|... |.++.|++ +.+++|+.||
T Consensus 148 ~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~--v~~~~~~~----~~l~s~s~dg 219 (445)
T 2ovr_B 148 TGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTST--VRCMHLHE----KRVVSGSRDA 219 (445)
T ss_dssp TCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSC--EEEEEEET----TEEEEEETTS
T ss_pred CCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCc--EEEEEecC----CEEEEEeCCC
Confidence 456788999999999999997 569999999999999999999999999988855 99999976 7899999999
Q ss_pred eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC--cccCCCCCcEE
Q 022870 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK--DDVPAEGPKYM 164 (291)
Q Consensus 87 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 164 (291)
+|++||+++++... .+..+........ .. ..........+...+|++....... .+.+|.. .++..++..++
T Consensus 220 ~i~~wd~~~~~~~~--~~~~~~~~v~~~~--~~-~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~l~ 293 (445)
T 2ovr_B 220 TLRVWDIETGQCLH--VLMGHVAAVRCVQ--YD-GRRVVSGAYDFMVKVWDPETETCLH-TLQGHTNRVYSLQFDGIHVV 293 (445)
T ss_dssp EEEEEESSSCCEEE--EEECCSSCEEEEE--EC-SSCEEEEETTSCEEEEEGGGTEEEE-EECCCSSCEEEEEECSSEEE
T ss_pred EEEEEECCCCcEEE--EEcCCcccEEEEE--EC-CCEEEEEcCCCEEEEEECCCCcEeE-EecCCCCceEEEEECCCEEE
Confidence 99999999876533 2222223333332 22 2233444556677888877665433 3345544 33333665544
Q ss_pred EEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCc
Q 022870 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (291)
Q Consensus 165 ~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (291)
+|+.|+.|++||+++++.+..+. +|.. .+.++. +.+. ++++|+.||.|++||+++ +++
T Consensus 294 --~~~~d~~i~i~d~~~~~~~~~~~--------~~~~----~v~~~~-~~~~------~l~~~~~dg~i~vwd~~~-~~~ 351 (445)
T 2ovr_B 294 --SGSLDTSIRVWDVETGNCIHTLT--------GHQS----LTSGME-LKDN------ILVSGNADSTVKIWDIKT-GQC 351 (445)
T ss_dssp --EEETTSCEEEEETTTCCEEEEEC--------CCCS----CEEEEE-EETT------EEEEEETTSCEEEEETTT-CCE
T ss_pred --EEeCCCeEEEEECCCCCEEEEEc--------CCcc----cEEEEE-EeCC------EEEEEeCCCeEEEEECCC-CcE
Confidence 56679999999999999988887 5533 445554 5533 899999999999999998 888
Q ss_pred eeeccc---cccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 245 LTAMKV---HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 245 ~~~~~~---h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+..+.+ |...|++++|++ .+|++|+.||.|++||+++++.+..+
T Consensus 352 ~~~~~~~~~~~~~v~~~~~~~--~~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 352 LQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp EEEECSTTSCSSCEEEEEECS--SEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEccCCCCCCCEEEEEECC--CEEEEEeCCCeEEEEECCCCceeeee
Confidence 888876 888999999975 59999999999999999999887664
No 83
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.3e-31 Score=227.64 Aligned_cols=254 Identities=12% Similarity=0.072 Sum_probs=190.4
Q ss_pred CCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCC----eEEEEEeeecCCcc-eEEEEEeecCCCCeEEEEeCCCeEEE
Q 022870 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH----RTVSSSWVHSAAHG-IVSVATGPSIGLNKVISQGRDGTVKC 90 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~s~~~dg~i~i 90 (291)
.|.+.|++++|+|++++|++++ ++.|++||+.++ +....+..|. .. |.+++|+|..++++|++++.||.|++
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~--~~~v~~~~~sp~~~~~~l~s~~~dg~v~v 92 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHG--SSVVTTVKFSPIKGSQYLCSGDESGKVIV 92 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTT--TSCEEEEEECSSTTCCEEEEEETTSEEEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCC--CceEEEEEECcCCCCCEEEEecCCCEEEE
Confidence 5899999999999999999998 789999999988 8888888886 77 99999998445689999999999999
Q ss_pred EECCCC------CCCCCCccccccceEEEEEeecccCccceeccCCC-CceeeecccCccccccCCCCCC----cccCCC
Q 022870 91 WDIENG------GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANE-PKDCYEREVGETVDTDSLCDSK----DDVPAE 159 (291)
Q Consensus 91 wd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 159 (291)
||+.++ .......+..+........+++............. ...++..+. ......+.+|.. ++|+|+
T Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~-~~~~~~~~~~~~~v~~~~~~~~ 171 (615)
T 1pgu_A 93 WGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS-GNSLGEVSGHSQRINACHLKQS 171 (615)
T ss_dssp EEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT-CCEEEECCSCSSCEEEEEECSS
T ss_pred EeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC-CCcceeeecCCccEEEEEECCC
Confidence 999754 11110011222334444444444332222222111 123333332 223344556655 899999
Q ss_pred CCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCC-CCCCceEEEeecCCCcEEEEEc
Q 022870 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPS-KSQGFVNVLAGYEDGSILVWDI 238 (291)
Q Consensus 160 ~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~g~~~l~~g~~dg~i~vwd~ 238 (291)
++.+++ +++.|+.|++||+++++.+..+. +|.. ....+.++. |+|+ +. +|++++.||.|++||+
T Consensus 172 ~~~~l~-~~~~d~~v~vwd~~~~~~~~~~~--------~~~~-~~~~v~~~~-~~~~~~~----~l~~~~~dg~i~vwd~ 236 (615)
T 1pgu_A 172 RPMRSM-TVGDDGSVVFYQGPPFKFSASDR--------THHK-QGSFVRDVE-FSPDSGE----FVITVGSDRKISCFDG 236 (615)
T ss_dssp SSCEEE-EEETTTEEEEEETTTBEEEEEEC--------SSSC-TTCCEEEEE-ECSTTCC----EEEEEETTCCEEEEET
T ss_pred CCcEEE-EEeCCCcEEEEeCCCcceeeeec--------ccCC-CCceEEEEE-ECCCCCC----EEEEEeCCCeEEEEEC
Confidence 986666 56679999999999999988887 5533 111577787 9997 43 8999999999999999
Q ss_pred cCCCCceeec-c---ccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 239 RNPGIPLTAM-K---VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 239 ~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
++ ++.+..+ . .|...|.+++|+ ++.+|++++.||.|++||+++++.+..+
T Consensus 237 ~~-~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 290 (615)
T 1pgu_A 237 KS-GEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKW 290 (615)
T ss_dssp TT-CCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CC-CCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 98 8888888 6 899999999999 9999999999999999999998877653
No 84
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-32 Score=238.62 Aligned_cols=214 Identities=14% Similarity=0.094 Sum_probs=164.8
Q ss_pred EecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEE
Q 022870 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (291)
Q Consensus 13 ~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd 92 (291)
...+|.+.|++++|+|++.+||+|+.||+|+|||..+.+....+. |. .+|.+++|+| + .+|++++.|++|++||
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~--~~V~~l~fsp--g-~~L~S~s~D~~v~lWd 85 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DR--SAIKEMRFVK--G-IYLVVINAKDTVYVLS 85 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SC--CCEEEEEEET--T-TEEEEEETTCEEEEEE
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CC--CCEEEEEEcC--C-CEEEEEECcCeEEEEE
Confidence 345899999999999999999999999999999998877665543 44 5599999999 4 6999999999999999
Q ss_pred CCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcC
Q 022870 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS 172 (291)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~ 172 (291)
+++++... .+.......+ ++|+|++..++ +|+.||
T Consensus 86 ~~~~~~~~----~~~~~~~V~~---------------------------------------v~~sp~g~~l~--sgs~dg 120 (902)
T 2oaj_A 86 LYSQKVLT----TVFVPGKITS---------------------------------------IDTDASLDWML--IGLQNG 120 (902)
T ss_dssp TTTCSEEE----EEECSSCEEE---------------------------------------EECCTTCSEEE--EEETTS
T ss_pred CCCCcEEE----EEcCCCCEEE---------------------------------------EEECCCCCEEE--EEcCCC
Confidence 99875432 1111110111 66999997665 677799
Q ss_pred eEEEEeCCCcceeeEeccccc----CCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeec
Q 022870 173 EVEIWDLNTAERCTRLHQNSC----GGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 248 (291)
Q Consensus 173 ~i~~wd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~ 248 (291)
.|++||+++++.. .+..... ....+| .+.+.+++ |+|++ +. .+++|+.||.| +||+++ ++++..+
T Consensus 121 ~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h----~~~V~sl~-~sp~~--~~-~l~~g~~dg~v-lWd~~~-~~~~~~~ 189 (902)
T 2oaj_A 121 SMIVYDIDRDQLS-SFKLDNLQKSSFFPAAR----LSPIVSIQ-WNPRD--IG-TVLISYEYVTL-TYSLVE-NEIKQSF 189 (902)
T ss_dssp CEEEEETTTTEEE-EEEECCHHHHHTCSSSC----CCCCCEEE-EETTE--EE-EEEEECSSCEE-EEETTT-TEEEEEE
T ss_pred cEEEEECCCCccc-cceeccccccccccccC----CCCeEEEE-EccCC--CC-EEEEEeCCCcE-EEECCC-CceEEEE
Confidence 9999999988753 1110000 011144 44677887 99962 22 89999999999 999998 7777777
Q ss_pred ccc------------------ccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceee
Q 022870 249 KVH------------------LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 249 ~~h------------------~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
..| ...|++++|+|++.+|++++.||.|++||+++++.+.
T Consensus 190 ~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 190 IYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp CCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred ecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 655 5789999999999999999999999999999988764
No 85
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.9e-32 Score=222.05 Aligned_cols=232 Identities=15% Similarity=0.090 Sum_probs=150.6
Q ss_pred eEEecCCccceeEEEEcC--------CCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCC-CeEEE
Q 022870 11 VAVLRGHRASVTDVCFHQ--------TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGL-NKVIS 81 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~--------~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s 81 (291)
+..+.||.+.|++++|+| ++++||+|+.|++|+|||+.++.++..+..|... |.+++|+| ++ .+|++
T Consensus 129 ~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~--v~~v~~~p--~~~~~l~~ 204 (393)
T 4gq1_A 129 LGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSP--GISVQFRP--SNPNQLIV 204 (393)
T ss_dssp ECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSC--EEEEEEET--TEEEEEEE
T ss_pred ecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCC--cEEEEECC--CCCceEEe
Confidence 456789999999999997 7889999999999999999988888888888754 99999999 65 47999
Q ss_pred EeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccC
Q 022870 82 QGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVP 157 (291)
Q Consensus 82 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 157 (291)
++.||+|++||+++++............. ...+.....+.. ......+|.. +.|+
T Consensus 205 ~~~d~~v~~wd~~t~~~~~~~~~~~~~~~--~~~~s~~~~~~~-------------------~~~~~~~~~~~v~~v~~~ 263 (393)
T 4gq1_A 205 GERNGNIRIFDWTLNLSAEENSQTELVKN--PWLLTLNTLPLV-------------------NTCHSSGIASSLANVRWI 263 (393)
T ss_dssp EETTSEEEEEETTCCC----------CSC--CCSEEEESGGGC-------------------------CCSSSCSEEEEE
T ss_pred cCCCCEEEEEECCCCcccccccccCCccc--ceEEecccccce-------------------eeeecccccccceeeeee
Confidence 99999999999998765331111000000 000000000000 0001112222 4554
Q ss_pred -CCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCc--------------ceeeeeEEEecCCCCCCce
Q 022870 158 -AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKG--------------RGMCMAVQAYLPSKSQGFV 222 (291)
Q Consensus 158 -~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~p~~~~g~~ 222 (291)
|++..++ +++.|+.+++||+..++....+. .|.... ........ |.|.. +..
T Consensus 264 ~~dg~~l~--s~s~d~~i~vwd~~~~~~~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~ 330 (393)
T 4gq1_A 264 GSDGSGIL--AMCKSGAWLRWNLFANNDYNEIS--------DSTMKLGPKNLLPNVQGISLFPSLLGAC-PHPRY--MDY 330 (393)
T ss_dssp TTTTCEEE--EECTTSEEEEEEC---------------------------CCSCSEEEECSSCCSSCCE-ECSSC--TTE
T ss_pred cCCCCEEE--EEeCCCCEEEEECccCCCCceEe--------eecCccccEEEccccccccccCcceeEE-EccCC--CCE
Confidence 7776655 67789999999998877655544 111110 01112222 55542 333
Q ss_pred EEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcC
Q 022870 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (291)
Q Consensus 223 ~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~ 282 (291)
++++|+.||.|++||+.+ +++...+..|..+|.+++|+|+|++||+++.|| +.+|.+.
T Consensus 331 ~~~sgs~Dg~V~lwd~~~-~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 331 FATAHSQHGLIQLINTYE-KDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEEEETTTTEEEEEETTC-TTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred EEEEECCCCEEEEEECCC-CcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 788999999999999998 777888888999999999999999999998776 6666553
No 86
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.6e-31 Score=219.70 Aligned_cols=245 Identities=15% Similarity=0.298 Sum_probs=179.5
Q ss_pred CCCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC
Q 022870 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (291)
Q Consensus 7 ~~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (291)
..++...+.+|.+.|++++| ++.+|++|+.||+|++||+.+++.+..+..|... |.+++|++ +.+++|+.||
T Consensus 162 ~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~--v~~l~~~~----~~l~s~s~dg 233 (435)
T 1p22_A 162 TLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA--VLHLRFNN----GMMVTCSKDR 233 (435)
T ss_dssp SCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSC--EEEEECCT----TEEEEEETTS
T ss_pred CCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCc--EEEEEEcC----CEEEEeeCCC
Confidence 34678889999999999999 7789999999999999999999999999988855 99999976 6999999999
Q ss_pred eEEEEECCCCCCCCC-CccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC--cccCCCCCcE
Q 022870 87 TVKCWDIENGGLSSN-PSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK--DDVPAEGPKY 163 (291)
Q Consensus 87 ~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 163 (291)
.|++||++++..... .....+....... .+. ..........+...+|++........ +.+|.. .++..++..
T Consensus 234 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~--~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~- 308 (435)
T 1p22_A 234 SIAVWDMASPTDITLRRVLVGHRAAVNVV--DFD-DKYIVSASGDRTIKVWNTSTCEFVRT-LNGHKRGIACLQYRDRL- 308 (435)
T ss_dssp CEEEEECSSSSCCEEEEEECCCSSCEEEE--EEE-TTEEEEEETTSEEEEEETTTCCEEEE-EECCSSCEEEEEEETTE-
T ss_pred cEEEEeCCCCCCceeeeEecCCCCcEEEE--EeC-CCEEEEEeCCCeEEEEECCcCcEEEE-EcCCCCcEEEEEeCCCE-
Confidence 999999988754310 0111222222222 221 22233444556677888876654333 334444 333334543
Q ss_pred EEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCC
Q 022870 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (291)
Q Consensus 164 ~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~ 243 (291)
++ +|+.||.|++||+++++++..+. +|. ..+.++. |.+ . +|++|+.||.|++||+++ +.
T Consensus 309 l~-~g~~dg~i~iwd~~~~~~~~~~~--------~h~----~~v~~~~-~~~-----~-~l~sg~~dg~i~vwd~~~-~~ 367 (435)
T 1p22_A 309 VV-SGSSDNTIRLWDIECGACLRVLE--------GHE----ELVRCIR-FDN-----K-RIVSGAYDGKIKVWDLVA-AL 367 (435)
T ss_dssp EE-EEETTSCEEEEETTTCCEEEEEC--------CCS----SCEEEEE-CCS-----S-EEEEEETTSCEEEEEHHH-HT
T ss_pred EE-EEeCCCeEEEEECCCCCEEEEEe--------CCc----CcEEEEE-ecC-----C-EEEEEeCCCcEEEEECCC-CC
Confidence 44 56679999999999999998887 663 3566676 743 3 899999999999999976 33
Q ss_pred ---------ceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCcee
Q 022870 244 ---------PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVS 287 (291)
Q Consensus 244 ---------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~ 287 (291)
++..+.+|.+.|++++| ++.+|++++.||.|++||+.+....
T Consensus 368 ~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~ 418 (435)
T 1p22_A 368 DPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAA 418 (435)
T ss_dssp STTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-------
T ss_pred CccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCc
Confidence 67888999999999999 5568999999999999999876544
No 87
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-31 Score=215.14 Aligned_cols=245 Identities=14% Similarity=0.161 Sum_probs=176.8
Q ss_pred EEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEE--eecCCCCeEEEEeCCCeEE
Q 022870 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT--GPSIGLNKVISQGRDGTVK 89 (291)
Q Consensus 12 ~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~l~s~~~dg~i~ 89 (291)
..+.+|.+.|++++|+|++++|++|+.||.|++||+.+++.+. +..|.. +|.+++| +| ++.+|++++.||.|+
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~--~v~~~~~~~~~--~~~~l~~~~~dg~i~ 154 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDA--PVKTIHWIKAP--NYSCVMTGSWDKTLK 154 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSS--CEEEEEEEECS--SCEEEEEEETTSEEE
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccC--ceEEEEEEeCC--CCCEEEEccCCCcEE
Confidence 7888999999999999999999999999999999999988776 455764 4999999 66 888999999999999
Q ss_pred EEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCC---CCC--cccCCCCCc--
Q 022870 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC---DSK--DDVPAEGPK-- 162 (291)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~-- 162 (291)
+||+++++... .+....... ..... .+............+|++............ +.. +++.++...
T Consensus 155 vwd~~~~~~~~----~~~~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (368)
T 3mmy_A 155 FWDTRSSNPMM----VLQLPERCY-CADVI-YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKP 228 (368)
T ss_dssp EECSSCSSCSE----EEECSSCEE-EEEEE-TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCE
T ss_pred EEECCCCcEEE----EEecCCCce-EEEec-CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCC
Confidence 99999886543 222221111 11111 122333444556667777655432222221 111 334333322
Q ss_pred EEEEecCCcCeEEEEeCCCc---ceeeEecccccCCCCCCCCC--------cceeeeeEEEecCCCCCCceEEEeecCCC
Q 022870 163 YMAVAGEQLSEVEIWDLNTA---ERCTRLHQNSCGGSPNFSSK--------GRGMCMAVQAYLPSKSQGFVNVLAGYEDG 231 (291)
Q Consensus 163 ~~~~~g~~d~~i~~wd~~~~---~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~p~~~~g~~~l~~g~~dg 231 (291)
..+++++.|+.|++||++.. +....+. +|... ....+.++. |+|+ ++ +|++|+.||
T Consensus 229 ~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~v~~~~-~sp~---~~-~l~s~~~dg 295 (368)
T 3mmy_A 229 TGFALGSIEGRVAIHYINPPNPAKDNFTFK--------CHRSNGTNTSAPQDIYAVNGIA-FHPV---HG-TLATVGSDG 295 (368)
T ss_dssp EEEEEEETTSEEEEEESSCSCHHHHSEEEE--------CSEEC----CCCEEECCEEEEE-ECTT---TC-CEEEEETTS
T ss_pred CeEEEecCCCcEEEEecCCCCccccceeee--------eeecccccccccccccceEEEE-EecC---CC-EEEEEccCC
Confidence 11236777999999999987 4455555 34221 111578887 9998 44 899999999
Q ss_pred cEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEc
Q 022870 232 SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL 281 (291)
Q Consensus 232 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~ 281 (291)
.|++||+++ ++++..+.+|...|++++|+|++.+|++++.|+..+.|++
T Consensus 296 ~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 296 RFSFWDKDA-RTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp CEEEEETTT-TEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred eEEEEECCC-CcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 999999998 8899999999999999999999999999999876555554
No 88
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.5e-31 Score=215.64 Aligned_cols=238 Identities=17% Similarity=0.285 Sum_probs=182.6
Q ss_pred eEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEE
Q 022870 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~i 90 (291)
+....+|...|++++| ++.+|++|+.||.|++||+.+++....+.+|... |.+++|. +++|++|+.||+|++
T Consensus 126 ~~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~--v~~l~~~----~~~l~sg~~dg~i~v 197 (435)
T 1p22_A 126 IHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGS--VLCLQYD----ERVIITGSSDSTVRV 197 (435)
T ss_dssp EECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSC--EEEEECC----SSEEEEEETTSCEEE
T ss_pred EecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCc--EEEEEEC----CCEEEEEcCCCeEEE
Confidence 3444567888999988 7889999999999999999999999999999855 9999983 489999999999999
Q ss_pred EECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCcccc--ccCCCCCC--cccCCCCCcEEEE
Q 022870 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVD--TDSLCDSK--DDVPAEGPKYMAV 166 (291)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~ 166 (291)
||+++++... .+..+........ ... .........+...+|++....... ..+.+|.. .++..++..++
T Consensus 198 wd~~~~~~~~--~~~~h~~~v~~l~--~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-- 270 (435)
T 1p22_A 198 WDVNTGEMLN--TLIHHCEAVLHLR--FNN-GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIV-- 270 (435)
T ss_dssp EESSSCCEEE--EECCCCSCEEEEE--CCT-TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEE--
T ss_pred EECCCCcEEE--EEcCCCCcEEEEE--EcC-CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEE--
Confidence 9999886543 2222222333322 222 233444556778888887665432 44556655 33333665444
Q ss_pred ecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCcee
Q 022870 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (291)
Q Consensus 167 ~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~ 246 (291)
+|+.||.|++||+++++.+..+. +|.. .+.++. |++. ++++|+.||.|++||+++ ++++.
T Consensus 271 s~~~dg~i~vwd~~~~~~~~~~~--------~~~~----~v~~~~-~~~~------~l~~g~~dg~i~iwd~~~-~~~~~ 330 (435)
T 1p22_A 271 SASGDRTIKVWNTSTCEFVRTLN--------GHKR----GIACLQ-YRDR------LVVSGSSDNTIRLWDIEC-GACLR 330 (435)
T ss_dssp EEETTSEEEEEETTTCCEEEEEE--------CCSS----CEEEEE-EETT------EEEEEETTSCEEEEETTT-CCEEE
T ss_pred EEeCCCeEEEEECCcCcEEEEEc--------CCCC----cEEEEE-eCCC------EEEEEeCCCeEEEEECCC-CCEEE
Confidence 56679999999999999998887 5643 456665 7533 899999999999999998 88999
Q ss_pred eccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCc
Q 022870 247 AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 247 ~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~ 285 (291)
.+.+|...|.+++| ++.+|++|+.||.|++||+++++
T Consensus 331 ~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 331 VLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHT
T ss_pred EEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCC
Confidence 99999999999999 56699999999999999997655
No 89
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.6e-30 Score=211.46 Aligned_cols=256 Identities=17% Similarity=0.205 Sum_probs=184.6
Q ss_pred CCCCceEEecCCc----cceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEE
Q 022870 6 PPPDPVAVLRGHR----ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVIS 81 (291)
Q Consensus 6 ~~~~~~~~l~~h~----~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s 81 (291)
.|..|.+.|.+.. --++.|+|++++ +||+|. |++|+|||..++++...+..+.+...|++++|+| +|++|++
T Consensus 89 i~~~p~~~l~ap~~~~d~y~~~l~wS~~n-~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fsp--dg~~las 164 (420)
T 4gga_A 89 IPSLPDRILDAPEIRNDYYLNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK--EGNYLAV 164 (420)
T ss_dssp CCSSCSEEEECTTCCCCTTCBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT--TSSEEEE
T ss_pred cCCCCceEEECCCCcccccceeEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECC--CCCEEEE
Confidence 3445566666432 236779999864 777765 8999999999999988887665546699999999 9999999
Q ss_pred EeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccC
Q 022870 82 QGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVP 157 (291)
Q Consensus 82 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 157 (291)
|+.||+|++||+++++... ....+......+.... ..............++..........+.+|.. +.++
T Consensus 165 gs~Dg~v~iWd~~~~~~~~----~~~~h~~~v~~~s~~~-~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~ 239 (420)
T 4gga_A 165 GTSSAEVQLWDVQQQKRLR----NMTSHSARVGSLSWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA 239 (420)
T ss_dssp EETTSCEEEEETTTTEEEE----EECCCSSCEEEEEEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC
T ss_pred EECCCeEEEEEcCCCcEEE----EEeCCCCceEEEeeCC-CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeec
Confidence 9999999999999886543 3333322222233222 12233334455566666665555555666665 8899
Q ss_pred CCCCcEEEEecCCcCeEEEEeCCCccee----eEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEe--ecCCC
Q 022870 158 AEGPKYMAVAGEQLSEVEIWDLNTAERC----TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA--GYEDG 231 (291)
Q Consensus 158 ~~~~~~~~~~g~~d~~i~~wd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~--g~~dg 231 (291)
|++..++ +++.|+.+++||..+++.. .... .| ...+.++. |+|.+. . ++++ |+.|+
T Consensus 240 ~~g~~l~--s~~~D~~v~i~~~~~~~~~~~~~~~~~--------~~----~~~V~~~~-~~p~~~--~-~la~~~gs~D~ 301 (420)
T 4gga_A 240 PDGRHLA--SGGNDNLVNVWPSAPGEGGWVPLQTFT--------QH----QGAVKAVA-WCPWQS--N-VLATGGGTSDR 301 (420)
T ss_dssp TTSSEEE--EEETTSCEEEEESSCCSSCSCCSEEEC--------CC----SSCEEEEE-ECTTCT--T-EEEEEECTTTC
T ss_pred CCCCeee--eeeccccceEEeeccccccceeeeeec--------cc----CCceeeee-eCCCcc--c-EEEEEeecCCC
Confidence 9997655 5667999999999877532 2222 33 45677776 999843 2 5544 56899
Q ss_pred cEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEec--CCCeEEEEEcCCCceeeee
Q 022870 232 SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG--ADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 232 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~dg~i~vw~~~~~~~~~~~ 290 (291)
.|++||+++ ++++..+..| ..+.++.|++++..+++++ .|+.|+|||+.+++.+.++
T Consensus 302 ~I~iwd~~t-~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l 360 (420)
T 4gga_A 302 HIRIWNVCS-GACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL 360 (420)
T ss_dssp EEEEEETTT-TEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE
T ss_pred EEEEEeCCc-cccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEE
Confidence 999999998 7887777754 5789999999999887754 7999999999999988764
No 90
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.5e-31 Score=211.88 Aligned_cols=231 Identities=12% Similarity=0.163 Sum_probs=171.9
Q ss_pred CeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecc
Q 022870 40 GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV 119 (291)
Q Consensus 40 g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (291)
..+..|+..+..+..++.+|... |++++|+| ++++|++|+.||+|++||+.+++... .+..+......+.+++.
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~~--V~~~~~sp--~~~~l~s~s~D~~v~iWd~~~~~~~~--~~~~h~~~v~~~~~s~~ 119 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSGK--VYSLDWTP--EKNWIVSASQDGRLIVWNALTSQKTH--AIKLHCPWVMECAFAPN 119 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSSC--EEEEEECT--TSSCEEEEETTSEEEEEETTTTEEEE--EEECCCTTCCCCEECTT
T ss_pred ccccccccceeEEeecccccccE--EEEEEEcC--CCCEEEEEeCCCeEEEEECCCCccce--EEecCCCCEEEEEECCC
Confidence 44567888888899999999865 99999999 99999999999999999998876433 22223333333334433
Q ss_pred cCccceeccCCCCceeeecccCc------cccccCCCCCC----cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEec
Q 022870 120 KEPYANAKQANEPKDCYEREVGE------TVDTDSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLH 189 (291)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~ 189 (291)
... ...........+|++.... .....+.+|.. +.|.|++...++ +|+.|+.|++||+++++.+..+.
T Consensus 120 g~~-las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~-s~s~D~~i~~wd~~~~~~~~~~~ 197 (380)
T 3iz6_a 120 GQS-VACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLI-TGSGDQTCVLWDVTTGQRISIFG 197 (380)
T ss_dssp SSE-EEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEE-EECTTSCEEEECTTTCCEEEEEC
T ss_pred CCE-EEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEE-EECCCCcEEEEEcCCCcEEEEee
Confidence 222 2233344566677765322 23334566665 788998766555 67779999999999999887774
Q ss_pred ccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEE
Q 022870 190 QNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS 269 (291)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 269 (291)
. .....+...+.++. |+|.. +. +|++|+.||.|++||++....++..+.+|.+.|++++|+|++.+|++
T Consensus 198 ~-------~~~~~h~~~v~~~~-~~~~~--~~-~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 266 (380)
T 3iz6_a 198 S-------EFPSGHTADVLSLS-INSLN--AN-MFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGT 266 (380)
T ss_dssp C-------CSSSSCCSCEEEEE-ECSSS--CC-EEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEE
T ss_pred c-------ccCCCCccCeEEEE-eecCC--CC-EEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEE
Confidence 2 11112345677776 87742 33 89999999999999998657888999999999999999999999999
Q ss_pred ecCCCeEEEEEcCCCceeee
Q 022870 270 GGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 270 ~s~dg~i~vw~~~~~~~~~~ 289 (291)
|+.||+|++||+++++.++.
T Consensus 267 ~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 267 GSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp ECSSSCEEEEETTTTEEEEE
T ss_pred EcCCCeEEEEECCCCcEEEE
Confidence 99999999999999887654
No 91
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-31 Score=216.71 Aligned_cols=247 Identities=14% Similarity=0.049 Sum_probs=166.1
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCe---EEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR---TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (291)
+++.++.+|...|++++|+|++++|++|+.|++|++||+.+++ ....+..|... |.+++|+| ++++|++++.|
T Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~--v~~~~~~~--~~~~l~~~~~d 121 (377)
T 3dwl_C 46 KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRA--ATFVRWSP--NEDKFAVGSGA 121 (377)
T ss_dssp EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSC--EEEEECCT--TSSCCEEEESS
T ss_pred EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCc--eEEEEECC--CCCEEEEEecC
Confidence 4567888999999999999999999999999999999998876 56666777744 99999999 99999999999
Q ss_pred CeEEEEECCCCCCCCC-Ccccc-ccceEEEEEeecccCccceeccCCCCceeeecccC-----------------ccccc
Q 022870 86 GTVKCWDIENGGLSSN-PSLTI-KTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVG-----------------ETVDT 146 (291)
Q Consensus 86 g~i~iwd~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~ 146 (291)
+.|++||+++++.... ..+.. +........+++... ........+...+|++... .....
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (377)
T 3dwl_C 122 RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCA 200 (377)
T ss_dssp SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEE
T ss_pred CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhh
Confidence 9999999998753110 01122 333444444544332 2233344566777887421 11222
Q ss_pred cCCCCCC----cccCCCCCcEEEEecCCcCeEEEEeCCCcce----eeEecccccCCCCCCCCCcceeeeeEEEecCCCC
Q 022870 147 DSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAER----CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS 218 (291)
Q Consensus 147 ~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 218 (291)
.+ .|.. ++|+|+++.++ +++.|+.|++||+++++. +..+. +| ...+.++. |+|+
T Consensus 201 ~~-~~~~~v~~~~~sp~~~~l~--~~~~d~~i~iwd~~~~~~~~~~~~~~~--------~~----~~~v~~~~-~s~~-- 262 (377)
T 3dwl_C 201 EY-PSGGWVHAVGFSPSGNALA--YAGHDSSVTIAYPSAPEQPPRALITVK--------LS----QLPLRSLL-WANE-- 262 (377)
T ss_dssp CC-CCSSSEEEEEECTTSSCEE--EEETTTEEC-CEECSTTSCEEECCCEE--------CS----SSCEEEEE-EEET--
T ss_pred cc-cCCceEEEEEECCCCCEEE--EEeCCCcEEEEECCCCCCcceeeEeec--------CC----CCceEEEE-EcCC--
Confidence 23 5554 89999998655 566799999999999887 55555 45 34577787 9998
Q ss_pred CCceEEEeecCCCcEEEEEccCCC-Cce----------------------------------e----------------e
Q 022870 219 QGFVNVLAGYEDGSILVWDIRNPG-IPL----------------------------------T----------------A 247 (291)
Q Consensus 219 ~g~~~l~~g~~dg~i~vwd~~~~~-~~~----------------------------------~----------------~ 247 (291)
++ +|++|+.++.+ +|+....+ +.. . .
T Consensus 263 -~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 339 (377)
T 3dwl_C 263 -SA-IVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSL 339 (377)
T ss_dssp -TE-EEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCC
T ss_pred -CC-EEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhcccccccccc
Confidence 54 88888766665 66654212 000 0 0
Q ss_pred ccccccceeEEEeecC-CC---eeEEecCCCeEEEEEc
Q 022870 248 MKVHLEPVLCLSIDES-CN---GGISGGADQKIVLYNL 281 (291)
Q Consensus 248 ~~~h~~~v~~~~~~~~-~~---~l~s~s~dg~i~vw~~ 281 (291)
...|...|+++++.+. +. .|+|+|.||.|++||+
T Consensus 340 ~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 340 PTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp SSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred CccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 1139999999997543 33 5999999999999985
No 92
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.7e-30 Score=227.87 Aligned_cols=254 Identities=17% Similarity=0.209 Sum_probs=196.6
Q ss_pred CCCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC
Q 022870 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (291)
Q Consensus 7 ~~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (291)
.++.+.++.+|.++|++++|+|++++|++|+.||.|++||+.+++.+..+..|... |.+++|+| ++.+|++++.||
T Consensus 44 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~--v~~~~~s~--~~~~l~~~~~dg 119 (814)
T 3mkq_A 44 TQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDY--IRSIAVHP--TKPYVLSGSDDL 119 (814)
T ss_dssp TTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSC--EEEEEECS--SSSEEEEEETTS
T ss_pred CCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCC--EEEEEEeC--CCCEEEEEcCCC
Confidence 34677889999999999999999999999999999999999999999999888855 99999999 999999999999
Q ss_pred eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCC--CC
Q 022870 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPA--EG 160 (291)
Q Consensus 87 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~ 160 (291)
.|++||++++.... .....+........+++............+...+|++............+.. ++|+| ++
T Consensus 120 ~i~vw~~~~~~~~~-~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 198 (814)
T 3mkq_A 120 TVKLWNWENNWALE-QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDK 198 (814)
T ss_dssp EEEEEEGGGTSEEE-EEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTC
T ss_pred EEEEEECCCCceEE-EEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCC
Confidence 99999998763211 1222233444445554422223334445566778887665544333333312 88888 77
Q ss_pred CcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccC
Q 022870 161 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (291)
Q Consensus 161 ~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~ 240 (291)
..++ +|+.||.|++||+++++.+..+. +| ...+.++. |+|++ . +|++|+.||.|++||+.+
T Consensus 199 ~~l~--~~~~dg~i~~~d~~~~~~~~~~~--------~~----~~~v~~~~-~~~~~---~-~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 199 PYMI--TASDDLTIKIWDYQTKSCVATLE--------GH----MSNVSFAV-FHPTL---P-IIISGSEDGTLKIWNSST 259 (814)
T ss_dssp CEEE--EECTTSEEEEEETTTTEEEEEEE--------CC----SSCEEEEE-ECSSS---S-EEEEEETTSCEEEEETTT
T ss_pred CEEE--EEeCCCEEEEEECCCCcEEEEEc--------CC----CCCEEEEE-EcCCC---C-EEEEEeCCCeEEEEECCC
Confidence 6544 56779999999999999888887 55 34567776 99984 4 899999999999999998
Q ss_pred CCCceeeccccccceeEEEeecCCCee-EEecCCCeEEEEEcCCCc
Q 022870 241 PGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHST 285 (291)
Q Consensus 241 ~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~dg~i~vw~~~~~~ 285 (291)
++.+..+..|...+.+++|+|++..+ ++++.|+.+.+|++....
T Consensus 260 -~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 260 -YKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDE 304 (814)
T ss_dssp -CSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCS
T ss_pred -CcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCC
Confidence 88999999999999999999998742 445557779999987643
No 93
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.2e-30 Score=213.04 Aligned_cols=257 Identities=9% Similarity=0.008 Sum_probs=177.3
Q ss_pred eEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCC---CCeEEEEEeee--------c--CCcceEEEEEeecCCCC
Q 022870 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV---QHRTVSSSWVH--------S--AAHGIVSVATGPSIGLN 77 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~---~~~~~~~~~~~--------~--~~~~v~~~~~~~~~~~~ 77 (291)
...+ +|.++|++++|+|++.+|++|+.||+|++||++ +++....+..+ . ....+.++.+....++.
T Consensus 105 ~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (437)
T 3gre_A 105 SLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS 183 (437)
T ss_dssp SEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE
T ss_pred eeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC
Confidence 3444 499999999999999999999999999999984 55554444332 1 22446677643222788
Q ss_pred eEEEEeCCCeEEEEECCCCCCCCCCcccc--ccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC--
Q 022870 78 KVISQGRDGTVKCWDIENGGLSSNPSLTI--KTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK-- 153 (291)
Q Consensus 78 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 153 (291)
+|++++.||.|++||+++++... .+.. +........+++.. .........+...+|+++...........|..
T Consensus 184 ~l~~~~~d~~i~iwd~~~~~~~~--~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v 260 (437)
T 3gre_A 184 LLVALTNLSRVIIFDIRTLERLQ--IIENSPRHGAVSSICIDEEC-CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPI 260 (437)
T ss_dssp EEEEEETTSEEEEEETTTCCEEE--EEECCGGGCCEEEEEECTTS-CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEE
T ss_pred EEEEEeCCCeEEEEeCCCCeeeE--EEccCCCCCceEEEEECCCC-CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCce
Confidence 99999999999999999876543 2222 23444444444442 22334445567888998876655443323333
Q ss_pred --c----ccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCC------CC--------CCCCcceeeeeEEEe
Q 022870 154 --D----DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGS------PN--------FSSKGRGMCMAVQAY 213 (291)
Q Consensus 154 --~----~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~------~~--------~~~~~~~~~~~~~~~ 213 (291)
+ +|+|++..+ + +|+.|+.|++||+++++++..+........ .+ ........+.++. |
T Consensus 261 ~~~~~~~~~s~~~~~l-~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~-~ 337 (437)
T 3gre_A 261 THVEVCQFYGKNSVIV-V-GGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTIS-V 337 (437)
T ss_dssp EEEEECTTTCTTEEEE-E-EESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEE-E
T ss_pred EEEEeccccCCCccEE-E-EEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEE-E
Confidence 5 555666433 3 677899999999999998887762110000 00 0001344566776 8
Q ss_pred cCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccc-------------------------------------ccccee
Q 022870 214 LPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV-------------------------------------HLEPVL 256 (291)
Q Consensus 214 ~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-------------------------------------h~~~v~ 256 (291)
+ + ++ +|++|+.||.|++||+++ ++....+.+ |...|+
T Consensus 338 ~-~---~~-~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~ 411 (437)
T 3gre_A 338 S-N---DK-ILLTDEATSSIVMFSLNE-LSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIIN 411 (437)
T ss_dssp E-T---TE-EEEEEGGGTEEEEEETTC-GGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEE
T ss_pred C-C---ce-EEEecCCCCeEEEEECCC-cccceEEecccccCceEEEEEeecceEEEEEecccccccccCccccccccee
Confidence 7 3 33 899999999999999998 666665554 889999
Q ss_pred EEEeecC--CCeeEEecCCCeEEEEE
Q 022870 257 CLSIDES--CNGGISGGADQKIVLYN 280 (291)
Q Consensus 257 ~~~~~~~--~~~l~s~s~dg~i~vw~ 280 (291)
+++|.++ +.+|++|+.||.|+||+
T Consensus 412 ~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 412 SISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred eEeeeccCCceEEEEEcCCceEEEeC
Confidence 9999877 88999999999999995
No 94
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.98 E-value=5.7e-30 Score=211.05 Aligned_cols=244 Identities=21% Similarity=0.342 Sum_probs=185.6
Q ss_pred CceEEecCCccce-eEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCe
Q 022870 9 DPVAVLRGHRASV-TDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (291)
Q Consensus 9 ~~~~~l~~h~~~v-~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (291)
+....+.+|.+.| .++. +++++|++|+.||+|++||+.+++.+..+.+|... |.+++|++ +++++|+.||+
T Consensus 109 ~~~~~l~~h~~~v~~~~~--~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~--v~~~~~~~----~~l~s~~~dg~ 180 (445)
T 2ovr_B 109 KSPKVLKGHDDHVITCLQ--FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG--VWSSQMRD----NIIISGSTDRT 180 (445)
T ss_dssp CCCEEEECSTTSCEEEEE--EETTEEEEEETTSCEEEEETTTCCEEEECCCCSSC--EEEEEEET----TEEEEEETTSC
T ss_pred ceeEEecccCCCcEEEEE--EcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCC--EEEEEecC----CEEEEEeCCCe
Confidence 4567899999875 5544 46889999999999999999999999999999855 99999986 79999999999
Q ss_pred EEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC--cccCCCCCcEEE
Q 022870 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK--DDVPAEGPKYMA 165 (291)
Q Consensus 88 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 165 (291)
|++||+.+++... .+..+........+ . ..........+...+|++....... .+.+|.. .++..++..++
T Consensus 181 i~vwd~~~~~~~~--~~~~h~~~v~~~~~--~-~~~l~s~s~dg~i~~wd~~~~~~~~-~~~~~~~~v~~~~~~~~~l~- 253 (445)
T 2ovr_B 181 LKVWNAETGECIH--TLYGHTSTVRCMHL--H-EKRVVSGSRDATLRVWDIETGQCLH-VLMGHVAAVRCVQYDGRRVV- 253 (445)
T ss_dssp EEEEETTTTEEEE--EECCCSSCEEEEEE--E-TTEEEEEETTSEEEEEESSSCCEEE-EEECCSSCEEEEEECSSCEE-
T ss_pred EEEEECCcCcEEE--EECCCCCcEEEEEe--c-CCEEEEEeCCCEEEEEECCCCcEEE-EEcCCcccEEEEEECCCEEE-
Confidence 9999999876533 22222233333322 2 2223344455677788887665433 2334444 23333665544
Q ss_pred EecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCce
Q 022870 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 245 (291)
Q Consensus 166 ~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~ 245 (291)
+|+.||.|++||+++++.+..+. +|. ..+.++. |. +. ++++|+.||.|++||+++ ++++
T Consensus 254 -~~~~dg~i~iwd~~~~~~~~~~~--------~~~----~~v~~~~-~~-----~~-~l~~~~~d~~i~i~d~~~-~~~~ 312 (445)
T 2ovr_B 254 -SGAYDFMVKVWDPETETCLHTLQ--------GHT----NRVYSLQ-FD-----GI-HVVSGSLDTSIRVWDVET-GNCI 312 (445)
T ss_dssp -EEETTSCEEEEEGGGTEEEEEEC--------CCS----SCEEEEE-EC-----SS-EEEEEETTSCEEEEETTT-CCEE
T ss_pred -EEcCCCEEEEEECCCCcEeEEec--------CCC----CceEEEE-EC-----CC-EEEEEeCCCeEEEEECCC-CCEE
Confidence 56679999999999999988887 553 3566676 73 33 899999999999999998 8899
Q ss_pred eeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 246 TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 246 ~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
..+.+|...+.++.++++ +|++|+.||.|++||+++++.+..+
T Consensus 313 ~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vwd~~~~~~~~~~ 355 (445)
T 2ovr_B 313 HTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTL 355 (445)
T ss_dssp EEECCCCSCEEEEEEETT--EEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEcCCcccEEEEEEeCC--EEEEEeCCCeEEEEECCCCcEEEEE
Confidence 999999999999988654 9999999999999999998877654
No 95
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.98 E-value=7.1e-30 Score=234.49 Aligned_cols=257 Identities=16% Similarity=0.221 Sum_probs=183.6
Q ss_pred CCCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC
Q 022870 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (291)
Q Consensus 7 ~~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (291)
..+.+.++.+|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+..|... |.+++|+|..++.++++|+.|+
T Consensus 646 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 646 TGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQ--VNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC--EEEEEECSSSSCCEEEEEETTS
T ss_pred CCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCc--EEEEEEecCCCceEEEEEeCCC
Confidence 34678899999999999999999999999999999999999999999999998855 9999999943445889999999
Q ss_pred eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCcc-----------------------
Q 022870 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGET----------------------- 143 (291)
Q Consensus 87 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 143 (291)
.|++||+++++... .+..+........+++.... .......+...+|++.....
T Consensus 724 ~v~vwd~~~~~~~~--~~~~h~~~v~~~~~sp~~~~-l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1249)
T 3sfz_A 724 FLKLWDLNQKECRN--TMFGHTNSVNHCRFSPDDEL-LASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVI 800 (1249)
T ss_dssp CEEEEETTSSSEEE--EECCCSSCEEEEEECSSTTE-EEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCC
T ss_pred eEEEEECCCcchhh--eecCCCCCEEEEEEecCCCE-EEEEECCCeEEEEeCCCCcccceecccccccccCCccccccce
Confidence 99999999886543 22223334444444443221 22222334455555443321
Q ss_pred -------------------------------ccccCCCCCC----cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEe
Q 022870 144 -------------------------------VDTDSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRL 188 (291)
Q Consensus 144 -------------------------------~~~~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~ 188 (291)
......+|.. ++|+|++..++ +++.|+.|++||+.+++.+..+
T Consensus 801 v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~--~~~~dg~v~vwd~~~~~~~~~~ 878 (1249)
T 3sfz_A 801 VKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAV--IALSQYCVELWNIDSRLKVADC 878 (1249)
T ss_dssp BCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEE--EECSSSCEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEE--EEeCCCeEEEEEcCCCceeeec
Confidence 1111113333 77888886544 5666899999999998887777
Q ss_pred cccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEE-------------------------------
Q 022870 189 HQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD------------------------------- 237 (291)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd------------------------------- 237 (291)
. +|. ..+.++. |+|+ |. +|++++.||.|++||
T Consensus 879 ~--------~h~----~~v~~v~-~spd---g~-~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1249)
T 3sfz_A 879 R--------GHL----SWVHGVM-FSPD---GS-SFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVD 941 (1249)
T ss_dssp C--------CCS----SCEEEEE-ECTT---SS-EEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEE
T ss_pred C--------CCc----cceEEEE-ECCC---CC-EEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEec
Confidence 6 553 2344454 6655 22 455555555555555
Q ss_pred ------------------------------------------------ccCCCCceeeccccccceeEEEeecCCCeeEE
Q 022870 238 ------------------------------------------------IRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS 269 (291)
Q Consensus 238 ------------------------------------------------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 269 (291)
+.+ ++....+.+|...|++++|+|++++|++
T Consensus 942 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~-~~~~~~~~~h~~~v~~l~~s~dg~~l~s 1020 (1249)
T 3sfz_A 942 NIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPN-NRVFSSGVGHKKAVRHIQFTADGKTLIS 1020 (1249)
T ss_dssp SSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTT-TSCEEECCCCSSCCCCEEECSSSSCEEE
T ss_pred CCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCC-CceeeecccCCCceEEEEECCCCCEEEE
Confidence 444 4556667789999999999999999999
Q ss_pred ecCCCeEEEEEcCCCceee
Q 022870 270 GGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 270 ~s~dg~i~vw~~~~~~~~~ 288 (291)
++.||.|++||+.+++...
T Consensus 1021 ~~~dg~i~vwd~~~~~~~~ 1039 (1249)
T 3sfz_A 1021 SSEDSVIQVWNWQTGDYVF 1039 (1249)
T ss_dssp ECSSSBEEEEETTTTEEEC
T ss_pred EcCCCEEEEEECCCCceEE
Confidence 9999999999999887653
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.2e-30 Score=231.06 Aligned_cols=261 Identities=11% Similarity=0.085 Sum_probs=174.6
Q ss_pred EecCCccceeEEEEcCC-CCEEEEecCCCeEEEEeCCCCeEEEEEeeec----------------CCcceEEEEEeecCC
Q 022870 13 VLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVSSSWVHS----------------AAHGIVSVATGPSIG 75 (291)
Q Consensus 13 ~l~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~----------------~~~~v~~~~~~~~~~ 75 (291)
.+++|.++|++++|+|+ +..|++|+.||.| +||+++++++..+..|. +...|.+++|+| +
T Consensus 146 ~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp--d 222 (902)
T 2oaj_A 146 FPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP--N 222 (902)
T ss_dssp CSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT--T
T ss_pred ccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC--C
Confidence 45789999999999995 5789999999999 99999999988887651 114599999999 9
Q ss_pred CCeEEEEeCCCeEEEEECCCCCCCCC-Ccc--ccc-------------cceEEEEEeecccCcc----------------
Q 022870 76 LNKVISQGRDGTVKCWDIENGGLSSN-PSL--TIK-------------TNSYHFCKLSLVKEPY---------------- 123 (291)
Q Consensus 76 ~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~--~~~-------------~~~~~~~~~~~~~~~~---------------- 123 (291)
|.+|++|+.||+|++||+++++.... ... ..+ ........+.....+.
T Consensus 223 g~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~ 302 (902)
T 2oaj_A 223 SLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDN 302 (902)
T ss_dssp SSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSC
T ss_pred CCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCC
Confidence 99999999999999999987654210 000 000 0011111111100000
Q ss_pred ----------------------------------------------------------------ceeccCCCCceeeecc
Q 022870 124 ----------------------------------------------------------------ANAKQANEPKDCYERE 139 (291)
Q Consensus 124 ----------------------------------------------------------------~~~~~~~~~~~~~~~~ 139 (291)
.......+....|++.
T Consensus 303 ~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~ 382 (902)
T 2oaj_A 303 QSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYP 382 (902)
T ss_dssp CCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETT
T ss_pred ceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECC
Confidence 0000011223444442
Q ss_pred cCcccc----------------------------------------ccCCCCCC----cccCCCCCcEEEEecCCcCeEE
Q 022870 140 VGETVD----------------------------------------TDSLCDSK----DDVPAEGPKYMAVAGEQLSEVE 175 (291)
Q Consensus 140 ~~~~~~----------------------------------------~~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~ 175 (291)
...... ..+.+|.. ++|+|+++.++ +|+.|++|+
T Consensus 383 ~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~la--Sgs~DgtVr 460 (902)
T 2oaj_A 383 SGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFI--TGHSNGSVR 460 (902)
T ss_dssp TCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEE--EEETTSEEE
T ss_pred CCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEE--EecCCCcEE
Confidence 221100 01233332 67889886443 777899999
Q ss_pred EEeCCCcceee--Eeccc-ccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCC----------
Q 022870 176 IWDLNTAERCT--RLHQN-SCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG---------- 242 (291)
Q Consensus 176 ~wd~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~---------- 242 (291)
+||+.++.... .+... ......+| ...+.+++ |+|+ |+ +||+|+.||+|+|||+.+..
T Consensus 461 lWd~~~g~~~~~~~~~~~l~~~~~~~h----~~~V~sva-fspd---g~-~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~ 531 (902)
T 2oaj_A 461 IYDASHGDIQDNASFEVNLSRTLNKAK----ELAVDKIS-FAAE---TL-ELAVSIETGDVVLFKYEVNQFYSVENRPES 531 (902)
T ss_dssp EEESSCCTTTTTBCEEEEHHHHTTCSS----SCCEEEEE-EETT---TT-EEEEEETTSCEEEEEEEECCC---------
T ss_pred EEECCCccccCCceEEeechhhcCCCC----CCceeEEE-ecCC---CC-eEEEEecCcEEEEEEecCccccCccccCCC
Confidence 99998874210 11100 00000022 45688887 9998 55 99999999999999998621
Q ss_pred ----------------------------------CceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceee
Q 022870 243 ----------------------------------IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 243 ----------------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
+++..+.+|.+.|++++|+|+| +||+|+.|++|++||++++.+++
T Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~ 610 (902)
T 2oaj_A 532 GDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIY 610 (902)
T ss_dssp ------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEE
T ss_pred cccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEE
Confidence 2366788899999999999999 99999999999999999887654
No 97
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=6.1e-30 Score=211.13 Aligned_cols=210 Identities=10% Similarity=0.041 Sum_probs=163.4
Q ss_pred EecCCccceeEEEEcCCCCEE-EEecCCCeEEEEeCC--CCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEE
Q 022870 13 VLRGHRASVTDVCFHQTKPIL-FAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (291)
Q Consensus 13 ~l~~h~~~v~~l~~~~~~~~l-~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~ 89 (291)
...+|.+.|++++|+|++++| ++|+.||.|++||+. +++.+..+..+.....|.+++|+| ++.+|++++.||.|+
T Consensus 97 ~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~~g~v~ 174 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE--DDTTVIIADKFGDVY 174 (450)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT--TSSEEEEEETTSEEE
T ss_pred CCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC--CCCEEEEEeCCCcEE
Confidence 345788899999999999996 899999999999998 888888887554445699999999 999999999999999
Q ss_pred EEECCCCCCCCCCcccccc--ceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCC---CCcEE
Q 022870 90 CWDIENGGLSSNPSLTIKT--NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAE---GPKYM 164 (291)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 164 (291)
+|++.+.+....+...+.. ..... ++|+|+ +..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~h~~~v~~----------------------------------------~~~sp~~~~~~~l- 213 (450)
T 2vdu_B 175 SIDINSIPEEKFTQEPILGHVSMLTD----------------------------------------VHLIKDSDGHQFI- 213 (450)
T ss_dssp EEETTSCCCSSCCCCCSEECSSCEEE----------------------------------------EEEEECTTSCEEE-
T ss_pred EEecCCcccccccceeeecccCceEE----------------------------------------EEEcCCCCCCcEE-
Confidence 9999877643211111111 11111 558888 6444
Q ss_pred EEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCc
Q 022870 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (291)
Q Consensus 165 ~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (291)
+ +|+.|+.|++||+++++.+..+.. +| ...+.++. |+ + +. +|++|+.|+.|++||+++ +++
T Consensus 214 ~-s~~~d~~i~vwd~~~~~~~~~~~~-------~h----~~~v~~~~-~s-d---~~-~l~s~~~d~~v~vwd~~~-~~~ 274 (450)
T 2vdu_B 214 I-TSDRDEHIKISHYPQCFIVDKWLF-------GH----KHFVSSIC-CG-K---DY-LLLSAGGDDKIFAWDWKT-GKN 274 (450)
T ss_dssp E-EEETTSCEEEEEESCTTCEEEECC-------CC----SSCEEEEE-EC-S---TT-EEEEEESSSEEEEEETTT-CCE
T ss_pred E-EEcCCCcEEEEECCCCceeeeeec-------CC----CCceEEEE-EC-C---CC-EEEEEeCCCeEEEEECCC-CcE
Confidence 4 566799999999999988777442 55 45677776 98 6 44 999999999999999998 777
Q ss_pred eeecccc-------------------------ccceeEEEeecCCCeeEEec-CCCeEEEEEc--CCC
Q 022870 245 LTAMKVH-------------------------LEPVLCLSIDESCNGGISGG-ADQKIVLYNL--DHS 284 (291)
Q Consensus 245 ~~~~~~h-------------------------~~~v~~~~~~~~~~~l~s~s-~dg~i~vw~~--~~~ 284 (291)
+..+..+ ...|.+++|+|++++|++++ .|+.|++|++ .++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 275 LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQK 342 (450)
T ss_dssp EEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSST
T ss_pred eeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCC
Confidence 7766532 35689999999999999998 8999999999 555
No 98
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=2.7e-29 Score=214.87 Aligned_cols=256 Identities=17% Similarity=0.219 Sum_probs=193.5
Q ss_pred CceEEecCCccc-eeEEEEcC--CCCEEEEecCCCeEEEEeCCCC--------eEEEEEeeecCCcceEEEEEeecCCCC
Q 022870 9 DPVAVLRGHRAS-VTDVCFHQ--TKPILFAGTTGGELRIWDTVQH--------RTVSSSWVHSAAHGIVSVATGPSIGLN 77 (291)
Q Consensus 9 ~~~~~l~~h~~~-v~~l~~~~--~~~~l~s~~~dg~v~iwd~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~~ 77 (291)
++...+.+|.+. |++++|+| ++++|++|+.||.|++||+.++ +....+..|.. +|.+++|+| +++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~--~~~ 129 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAG--PISDISWDF--EGR 129 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSS--CEEEEEECT--TSS
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccc--cEEEEEEeC--CCC
Confidence 678999999999 99999999 9999999999999999999744 66677777774 499999999 999
Q ss_pred eEEEEeCC----CeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCC-
Q 022870 78 KVISQGRD----GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDS- 152 (291)
Q Consensus 78 ~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 152 (291)
+|++++.+ +.|++||. ++... .+..+........+.+............+...+|+....+..........
T Consensus 130 ~l~~~~~~~~~~~~v~~~d~--~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~ 205 (615)
T 1pgu_A 130 RLCVVGEGRDNFGVFISWDS--GNSLG--EVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQ 205 (615)
T ss_dssp EEEEEECCSSCSEEEEETTT--CCEEE--ECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCT
T ss_pred EEEEeccCCCCccEEEEEEC--CCcce--eeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCC
Confidence 99999988 78999983 32221 22233344455555554433444555567778888776654433222222
Q ss_pred --C---cccCCC-CCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEe
Q 022870 153 --K---DDVPAE-GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (291)
Q Consensus 153 --~---~~~~~~-~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~ 226 (291)
. ++|+|+ ++.++ +++.|+.|++||+++++.+..+.. . .......+.++. |+ + +. +|++
T Consensus 206 ~~~v~~~~~~~~~~~~l~--~~~~dg~i~vwd~~~~~~~~~~~~-------~-~~~~~~~v~~~~-~~-~---~~-~l~~ 269 (615)
T 1pgu_A 206 GSFVRDVEFSPDSGEFVI--TVGSDRKISCFDGKSGEFLKYIED-------D-QEPVQGGIFALS-WL-D---SQ-KFAT 269 (615)
T ss_dssp TCCEEEEEECSTTCCEEE--EEETTCCEEEEETTTCCEEEECCB-------T-TBCCCSCEEEEE-ES-S---SS-EEEE
T ss_pred CceEEEEEECCCCCCEEE--EEeCCCeEEEEECCCCCEeEEecc-------c-ccccCCceEEEE-Ec-C---CC-EEEE
Confidence 2 899999 76554 566699999999999998887731 0 001355677887 98 6 44 8999
Q ss_pred ecCCCcEEEEEccCCCCceeecccc----ccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 227 GYEDGSILVWDIRNPGIPLTAMKVH----LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 227 g~~dg~i~vwd~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
++.||.|++||+++ ++.+..+..+ ...+.++.|. ++.++++++.||.|++||+++++.+..+
T Consensus 270 ~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~ 335 (615)
T 1pgu_A 270 VGADATIRVWDVTT-SKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTI 335 (615)
T ss_dssp EETTSEEEEEETTT-TEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEE
T ss_pred EcCCCcEEEEECCC-CcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEE
Confidence 99999999999998 7888888766 4678888886 7889999999999999999987776543
No 99
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=4.5e-30 Score=208.93 Aligned_cols=213 Identities=19% Similarity=0.252 Sum_probs=161.8
Q ss_pred CceEEecCCccceeEEEEcCCC-CEEEEecCCCeEEEEeCCCCeEEEEE--eeecCCcceEEEEEeecCCCCeEEEEeCC
Q 022870 9 DPVAVLRGHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQHRTVSSS--WVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (291)
+++..+.+|...|++++|+|++ .+|++|+.||.|++||+.+++.+..+ ..|... |.+++|+| ++++|++++.|
T Consensus 122 ~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--v~~~~~~~--~~~~l~~~~~d 197 (402)
T 2aq5_A 122 EPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDT--IYSVDWSR--DGALICTSCRD 197 (402)
T ss_dssp SCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSC--EEEEEECT--TSSCEEEEETT
T ss_pred CceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCc--eEEEEECC--CCCEEEEEecC
Confidence 5688899999999999999998 69999999999999999999999988 667744 99999999 99999999999
Q ss_pred CeEEEEECCCCCCCCCCcccc-ccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEE
Q 022870 86 GTVKCWDIENGGLSSNPSLTI-KTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (291)
Q Consensus 86 g~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
|.|++||+++++... .+ ..+... . -..++|+|++.. +
T Consensus 198 ~~i~iwd~~~~~~~~----~~~~~~~~~-~------------------------------------~~~~~~~~~~~~-l 235 (402)
T 2aq5_A 198 KRVRVIEPRKGTVVA----EKDRPHEGT-R------------------------------------PVHAVFVSEGKI-L 235 (402)
T ss_dssp SEEEEEETTTTEEEE----EEECSSCSS-S------------------------------------CCEEEECSTTEE-E
T ss_pred CcEEEEeCCCCceee----eeccCCCCC-c------------------------------------ceEEEEcCCCcE-E
Confidence 999999998865322 11 000000 0 000558898754 3
Q ss_pred EEec---CCcCeEEEEeCCCcce-eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccC
Q 022870 165 AVAG---EQLSEVEIWDLNTAER-CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (291)
Q Consensus 165 ~~~g---~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~ 240 (291)
+ +| +.|+.|++||+++++. ...... .+ ...+.++. |+|+ ++.++++|+.||.|++||+.+
T Consensus 236 ~-~g~~~~~d~~i~iwd~~~~~~~~~~~~~-------~~----~~~v~~~~-~s~~---~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 236 T-TGFSRMSERQVALWDTKHLEEPLSLQEL-------DT----SSGVLLPF-FDPD---TNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp E-EEECTTCCEEEEEEETTBCSSCSEEEEC-------CC----CSSCEEEE-EETT---TTEEEEEETTCSCEEEEEECS
T ss_pred E-EeccCCCCceEEEEcCccccCCceEEec-------cC----CCceeEEE-EcCC---CCEEEEEEcCCCeEEEEEecC
Confidence 3 55 6799999999998764 222221 12 23466676 9998 442345777899999999998
Q ss_pred CCCc-eeecccc--ccceeEEEeecCCCeeEEecCCCeEEEEEcCCCce
Q 022870 241 PGIP-LTAMKVH--LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 241 ~~~~-~~~~~~h--~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~ 286 (291)
+++ +..+..| ...|.+++|+|++.++++ .++.+++|++.++++
T Consensus 300 -~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 300 -EAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp -STTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred -CCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 553 5555544 589999999999997765 467999999998765
No 100
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=2.6e-29 Score=199.86 Aligned_cols=240 Identities=12% Similarity=0.056 Sum_probs=179.8
Q ss_pred eEEecCCccceeEEEEcCCCC-EEEEecCCCeEEEEeC-CCCeEEEEEee--ecCCcceEEEEEeecCCCCeEEEEeCCC
Q 022870 11 VAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDT-VQHRTVSSSWV--HSAAHGIVSVATGPSIGLNKVISQGRDG 86 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~iwd~-~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~~~dg 86 (291)
...+.+|...|++++|+|++. +|++|+.||.|++||+ .+++. ..+.. |.. +|.+++|+| +++|++++.|+
T Consensus 49 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~--~v~~l~~~~---~~~l~s~~~d~ 122 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANL--GICRICKYG---DDKLIAASWDG 122 (342)
T ss_dssp EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCS--CEEEEEEET---TTEEEEEETTS
T ss_pred ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCC--ceEEEEeCC---CCEEEEEcCCC
Confidence 556668999999999999999 9999999999999999 77755 56667 774 499999998 48999999999
Q ss_pred eEEEEECCC---------CCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeeccc-Cccc-cccCCCCCC--
Q 022870 87 TVKCWDIEN---------GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV-GETV-DTDSLCDSK-- 153 (291)
Q Consensus 87 ~i~iwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~-- 153 (291)
.|++||+++ .+... .+. .........+... . .......+...+|++.. .... ......+..
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~~--~~~-~~~~v~~~~~~~~--~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i 196 (342)
T 1yfq_A 123 LIEVIDPRNYGDGVIAVKNLNSN--NTK-VKNKIFTMDTNSS--R-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQI 196 (342)
T ss_dssp EEEEECHHHHTTBCEEEEESCSS--SSS-SCCCEEEEEECSS--E-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCE
T ss_pred eEEEEcccccccccccccCCeee--EEe-eCCceEEEEecCC--c-EEEEeCCCeEEEEECCccccccceeeecCCCCce
Confidence 999999987 55433 112 2223333333322 2 33344556677788776 3321 122223332
Q ss_pred --cccCC-CCCcEEEEecCCcCeEEEEeCCCc------ceeeEecccccCCCCCCCC-----CcceeeeeEEEecCCCCC
Q 022870 154 --DDVPA-EGPKYMAVAGEQLSEVEIWDLNTA------ERCTRLHQNSCGGSPNFSS-----KGRGMCMAVQAYLPSKSQ 219 (291)
Q Consensus 154 --~~~~~-~~~~~~~~~g~~d~~i~~wd~~~~------~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~ 219 (291)
++|+| ++..++ +++.||.|++||++.. +....+. .|.. .....+.++. |+|+
T Consensus 197 ~~i~~~~~~~~~l~--~~~~dg~i~i~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~~~~-~s~~--- 262 (342)
T 1yfq_A 197 RDVALLPKEQEGYA--CSSIDGRVAVEFFDDQGDDYNSSKRFAFR--------CHRLNLKDTNLAYPVNSIE-FSPR--- 262 (342)
T ss_dssp EEEEECSGGGCEEE--EEETTSEEEEEECCTTCCSTTCTTCEEEE--------CCCCCTTCCSSCCCEEEEE-ECTT---
T ss_pred eEEEECCCCCCEEE--EEecCCcEEEEEEcCCCcccccccceeee--------cccccccccccceeEEEEE-EcCC---
Confidence 89999 886554 5666999999999887 6667776 4433 1234678887 9998
Q ss_pred CceEEEeecCCCcEEEEEccCCCCceeecccc-ccceeEEEeecCCCeeEEecCCCe-EEEEE
Q 022870 220 GFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH-LEPVLCLSIDESCNGGISGGADQK-IVLYN 280 (291)
Q Consensus 220 g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~dg~-i~vw~ 280 (291)
++ +|++|+.||.|++||+++ ++++..+.+| ...|++++ |++.+|++++.||. .+.|.
T Consensus 263 ~~-~l~~~~~dg~i~vwd~~~-~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 263 HK-FLYTAGSDGIISCWNLQT-RKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp TC-CEEEEETTSCEEEEETTT-TEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred CC-EEEEecCCceEEEEcCcc-HhHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 44 899999999999999998 8889999998 99999999 99999999999998 44444
No 101
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=3.3e-28 Score=197.12 Aligned_cols=252 Identities=11% Similarity=0.068 Sum_probs=186.2
Q ss_pred CCceEEecCCccceeEEEEcCCCCEE-EEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEE-EEeCC
Q 022870 8 PDPVAVLRGHRASVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRD 85 (291)
Q Consensus 8 ~~~~~~l~~h~~~v~~l~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~d 85 (291)
.+.+..+.+|. .+.+++|+|+++++ ++++.|+.|++||+.+++.+..+..+. .+.+++|+| ++++|+ +++.+
T Consensus 22 ~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~---~v~~~~~sp--dg~~l~~~~~~~ 95 (391)
T 1l0q_A 22 NKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS---SPQGVAVSP--DGKQVYVTNMAS 95 (391)
T ss_dssp TEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS---SEEEEEECT--TSSEEEEEETTT
T ss_pred CeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC---CccceEECC--CCCEEEEEECCC
Confidence 45667777775 48999999999876 677899999999999999988887654 499999999 888775 55567
Q ss_pred CeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC---cccCCCCCc
Q 022870 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK---DDVPAEGPK 162 (291)
Q Consensus 86 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 162 (291)
+.|++||+.+++... ..... .......+++.................|++...+..... ..+.. ++|+|+++.
T Consensus 96 ~~v~v~d~~~~~~~~--~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~dg~~ 171 (391)
T 1l0q_A 96 STLSVIDTTSNTVAG--TVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV-SVGRSPKGIAVTPDGTK 171 (391)
T ss_dssp TEEEEEETTTTEEEE--EEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-ECCSSEEEEEECTTSSE
T ss_pred CEEEEEECCCCeEEE--EEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE-ecCCCcceEEECCCCCE
Confidence 999999999876533 11211 223333444443333233444566777777665543322 22222 899999987
Q ss_pred EEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeec---CCCcEEEEEcc
Q 022870 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY---EDGSILVWDIR 239 (291)
Q Consensus 163 ~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~---~dg~i~vwd~~ 239 (291)
+++ +++.++.|++||+++++....+.. ...+.++. |+|+ |+ +|++++ .++.|++||++
T Consensus 172 l~~-~~~~~~~v~~~d~~~~~~~~~~~~-------------~~~~~~~~-~~~~---g~-~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 172 VYV-ANFDSMSISVIDTVTNSVIDTVKV-------------EAAPSGIA-VNPE---GT-KAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp EEE-EETTTTEEEEEETTTTEEEEEEEC-------------SSEEEEEE-ECTT---SS-EEEEEEECSSCCEEEEEETT
T ss_pred EEE-EeCCCCEEEEEECCCCeEEEEEec-------------CCCccceE-ECCC---CC-EEEEEecCcCCCcEEEEECC
Confidence 755 566689999999999988777751 23456676 9998 44 666666 78999999999
Q ss_pred CCCCceeeccccccceeEEEeecCCCee-EEecCCCeEEEEEcCCCceeeee
Q 022870 240 NPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 240 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+ ++++..+..|. .+.+++|+|++++| ++++.|+.|++||+++++++..+
T Consensus 233 ~-~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 233 T-NKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp T-TEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred C-CeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 8 77788887765 47899999999877 67789999999999999887654
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.4e-30 Score=206.18 Aligned_cols=199 Identities=11% Similarity=0.037 Sum_probs=149.2
Q ss_pred EEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCcc
Q 022870 25 CFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSL 104 (291)
Q Consensus 25 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 104 (291)
.+.+++.+|++|+.||+|++||+.+++.+..+. . ..|.++.|+| + +++++.|++|++|+...... ..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~--~~v~~~~~~~--~---~~s~s~D~~i~~w~~~~~~~----~~ 109 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--T--PNPRTGGEHP--A---IISRGPCNRLLLLYPGNQIT----IL 109 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--E--ECCCTTCCCC--S---EEEECSTTEEEEEETTTEEE----EE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--c--CCceeeeeCC--c---eEEecCCCeEEEEEccCceE----Ee
Confidence 344578899999999999999999999888876 2 3488999999 5 99999999999999874211 00
Q ss_pred ccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCC--CCCcEEEEecCCcCeEEEEe
Q 022870 105 TIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPA--EGPKYMAVAGEQLSEVEIWD 178 (291)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~g~~d~~i~~wd 178 (291)
....... .......|.. ++|+| ++..++ +++.||.|++||
T Consensus 110 ~~~~~~~--------------------------------~~~~~~~~~~~v~~~~~~~~~~~~~l~--s~s~dg~i~~wd 155 (343)
T 3lrv_A 110 DSKTNKV--------------------------------LREIEVDSANEIIYMYGHNEVNTEYFI--WADNRGTIGFQS 155 (343)
T ss_dssp ETTTCCE--------------------------------EEEEECCCSSCEEEEECCC---CCEEE--EEETTCCEEEEE
T ss_pred ecCCcce--------------------------------eEEeecCCCCCEEEEEcCCCCCCCEEE--EEeCCCcEEEEE
Confidence 1111100 0000001111 66899 876544 667799999999
Q ss_pred CCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCce-eeccc-ccccee
Q 022870 179 LNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL-TAMKV-HLEPVL 256 (291)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~-~~~~~-h~~~v~ 256 (291)
+++++....... .+ ...+.++. |+|+ |. +|++|+.||.|++||+++ ++.+ ..+.. |.++|+
T Consensus 156 ~~~~~~~~~~~~-------~~----~~~i~~~~-~~pd---g~-~lasg~~dg~i~iwd~~~-~~~~~~~~~~~h~~~v~ 218 (343)
T 3lrv_A 156 YEDDSQYIVHSA-------KS----DVEYSSGV-LHKD---SL-LLALYSPDGILDVYNLSS-PDQASSRFPVDEEAKIK 218 (343)
T ss_dssp SSSSCEEEEECC-------CS----SCCCCEEE-ECTT---SC-EEEEECTTSCEEEEESSC-TTSCCEECCCCTTSCEE
T ss_pred CCCCcEEEEEec-------CC----CCceEEEE-ECCC---CC-EEEEEcCCCEEEEEECCC-CCCCccEEeccCCCCEE
Confidence 999988666542 22 23467776 9998 44 999999999999999998 5655 77887 999999
Q ss_pred EEEeecCCCeeEEecCCCeEEEEEcCCCceee
Q 022870 257 CLSIDESCNGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 257 ~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
+++|+|++.+|++++ |+.|++||+++++.++
T Consensus 219 ~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~ 249 (343)
T 3lrv_A 219 EVKFADNGYWMVVEC-DQTVVCFDLRKDVGTL 249 (343)
T ss_dssp EEEECTTSSEEEEEE-SSBEEEEETTSSTTCB
T ss_pred EEEEeCCCCEEEEEe-CCeEEEEEcCCCCcce
Confidence 999999999999999 5599999999987654
No 103
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=4.9e-29 Score=199.31 Aligned_cols=213 Identities=16% Similarity=0.256 Sum_probs=158.7
Q ss_pred eEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCC
Q 022870 51 RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQAN 130 (291)
Q Consensus 51 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (291)
+....+.+|... |.+++|+| ++.+|++|+.||+|++||..+.+... ....+......+.+++...... .....
T Consensus 55 ~~~~~l~gH~~~--V~~~~~s~--d~~~l~s~s~Dg~v~vWd~~~~~~~~--~~~~~~~~v~~~~~sp~g~~la-sg~~d 127 (354)
T 2pbi_B 55 KTRRTLKGHGNK--VLCMDWCK--DKRRIVSSSQDGKVIVWDSFTTNKEH--AVTMPCTWVMACAYAPSGCAIA-CGGLD 127 (354)
T ss_dssp CEEEEEECCSSC--EEEEEECT--TSSEEEEEETTSEEEEEETTTCCEEE--EEECSSSCCCEEEECTTSSEEE-EESTT
T ss_pred EEEEEecCCCCe--EEEEEECC--CCCEEEEEeCCCeEEEEECCCCCcce--EEecCCCCEEEEEECCCCCEEE-EeeCC
Confidence 566788899855 99999999 99999999999999999998775433 2233333334444444432222 22223
Q ss_pred CCceeeecccCc-----cccccCCCCCC----cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCC
Q 022870 131 EPKDCYEREVGE-----TVDTDSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSS 201 (291)
Q Consensus 131 ~~~~~~~~~~~~-----~~~~~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 201 (291)
....+|++.... .....+..|.. ++|+|++..++ +++.|++|++||+++++.+..+. +|..
T Consensus 128 ~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~--t~s~D~~v~lwd~~~~~~~~~~~--------~h~~ 197 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQIL--TASGDGTCALWDVESGQLLQSFH--------GHGA 197 (354)
T ss_dssp SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEE--EEETTSEEEEEETTTCCEEEEEE--------CCSS
T ss_pred CCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEE--EEeCCCcEEEEeCCCCeEEEEEc--------CCCC
Confidence 344555543221 12223334554 88999987665 56679999999999999998888 6643
Q ss_pred CcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEc
Q 022870 202 KGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL 281 (291)
Q Consensus 202 ~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~ 281 (291)
.+.++. |+|+.. |. +|++|+.||.|++||+++ ++++..+.+|...|++++|+|++.+|++++.|++|++||+
T Consensus 198 ----~v~~~~-~~~~~~-g~-~l~sgs~Dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~ 269 (354)
T 2pbi_B 198 ----DVLCLD-LAPSET-GN-TFVSGGCDKKAMVWDMRS-GQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDL 269 (354)
T ss_dssp ----CEEEEE-ECCCSS-CC-EEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ----CeEEEE-EEeCCC-CC-EEEEEeCCCeEEEEECCC-CcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 456665 877532 44 899999999999999998 8889999999999999999999999999999999999999
Q ss_pred CCCceee
Q 022870 282 DHSTVSH 288 (291)
Q Consensus 282 ~~~~~~~ 288 (291)
+.++.+.
T Consensus 270 ~~~~~~~ 276 (354)
T 2pbi_B 270 RADREVA 276 (354)
T ss_dssp TTTEEEE
T ss_pred CCCcEEE
Confidence 9876553
No 104
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-29 Score=208.12 Aligned_cols=209 Identities=10% Similarity=0.065 Sum_probs=159.5
Q ss_pred ccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCe---EEEEEeeecC---------------------------------
Q 022870 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR---TVSSSWVHSA--------------------------------- 61 (291)
Q Consensus 18 ~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~--------------------------------- 61 (291)
..++.+++|+++|++|+++ .++.|++||+.+++ .+..+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4578999999999966665 57899999999988 6655543221
Q ss_pred -------------------CcceEEEEEeecCCCCeE-EEEeCCCeEEEEECC--CCCCCCCCcccccc--ce-EEEEEe
Q 022870 62 -------------------AHGIVSVATGPSIGLNKV-ISQGRDGTVKCWDIE--NGGLSSNPSLTIKT--NS-YHFCKL 116 (291)
Q Consensus 62 -------------------~~~v~~~~~~~~~~~~~l-~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~--~~-~~~~~~ 116 (291)
...|.+++|+| ++.+| ++++.||.|++||+. +++... .+.. .. ...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--d~~~l~~~~~~dg~v~iwd~~~~~~~~~~----~~~~~~~~~~v~~-- 154 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTS--DESRLIACADSDKSLLVFDVDKTSKNVLK----LRKRFCFSKRPNA-- 154 (450)
T ss_dssp -----------------CCCCCEEEEEECT--TSSEEEEEEGGGTEEEEEEECSSSSSCEE----EEEEEECSSCEEE--
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcC--CCCEEEEEECCCCeEEEEECcCCCCceee----eeecccCCCCceE--
Confidence 01499999999 98986 899999999999998 554322 1110 00 0000
Q ss_pred ecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcceee----Eecccc
Q 022870 117 SLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCT----RLHQNS 192 (291)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~----~~~~~~ 192 (291)
++|+|++..++ +|+.||.+++||+.+++... .+.
T Consensus 155 -------------------------------------~~~sp~~~~l~--~~~~~g~v~~~~~~~~~~~~~~~~~~~--- 192 (450)
T 2vdu_B 155 -------------------------------------ISIAEDDTTVI--IADKFGDVYSIDINSIPEEKFTQEPIL--- 192 (450)
T ss_dssp -------------------------------------EEECTTSSEEE--EEETTSEEEEEETTSCCCSSCCCCCSE---
T ss_pred -------------------------------------EEEcCCCCEEE--EEeCCCcEEEEecCCcccccccceeee---
Confidence 66999997665 55668999999998876543 333
Q ss_pred cCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceee-ccccccceeEEEeecCCCeeEEec
Q 022870 193 CGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA-MKVHLEPVLCLSIDESCNGGISGG 271 (291)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~s 271 (291)
+| ...+.++. |+|+...++ +|++|+.|+.|++||+++ ++.+.. +.+|...|++++|+ ++.+|++++
T Consensus 193 -----~h----~~~v~~~~-~sp~~~~~~-~l~s~~~d~~i~vwd~~~-~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~ 259 (450)
T 2vdu_B 193 -----GH----VSMLTDVH-LIKDSDGHQ-FIITSDRDEHIKISHYPQ-CFIVDKWLFGHKHFVSSICCG-KDYLLLSAG 259 (450)
T ss_dssp -----EC----SSCEEEEE-EEECTTSCE-EEEEEETTSCEEEEEESC-TTCEEEECCCCSSCEEEEEEC-STTEEEEEE
T ss_pred -----cc----cCceEEEE-EcCCCCCCc-EEEEEcCCCcEEEEECCC-CceeeeeecCCCCceEEEEEC-CCCEEEEEe
Confidence 44 34677787 999711133 899999999999999998 666666 66899999999999 999999999
Q ss_pred CCCeEEEEEcCCCceeeee
Q 022870 272 ADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 272 ~dg~i~vw~~~~~~~~~~~ 290 (291)
.|+.|++||++++++++.+
T Consensus 260 ~d~~v~vwd~~~~~~~~~~ 278 (450)
T 2vdu_B 260 GDDKIFAWDWKTGKNLSTF 278 (450)
T ss_dssp SSSEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEECCCCcEeeee
Confidence 9999999999999887654
No 105
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=7.8e-29 Score=204.22 Aligned_cols=249 Identities=10% Similarity=0.106 Sum_probs=175.9
Q ss_pred ceEEecCCc------------cceeEEEEcCCC--CEEEEecCCCeEEEEeCCCCeEE----------------------
Q 022870 10 PVAVLRGHR------------ASVTDVCFHQTK--PILFAGTTGGELRIWDTVQHRTV---------------------- 53 (291)
Q Consensus 10 ~~~~l~~h~------------~~v~~l~~~~~~--~~l~s~~~dg~v~iwd~~~~~~~---------------------- 53 (291)
+...+.+|. +.|++++|+|++ .+|++++.|++|++||+.+++..
T Consensus 73 ~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 152 (447)
T 3dw8_B 73 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTL 152 (447)
T ss_dssp EEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSC
T ss_pred EecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccce
Confidence 577899998 889999999988 79999999999999998764432
Q ss_pred -----------------EE-EeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCC-CCC-----CCccccccc
Q 022870 54 -----------------SS-SWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG-LSS-----NPSLTIKTN 109 (291)
Q Consensus 54 -----------------~~-~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~-----~~~~~~~~~ 109 (291)
.. ...|. .+|.+++|+| ++++|++| .|+.|++||+++.. ... ...+..+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~--~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 227 (447)
T 3dw8_B 153 RVPVFRPMDLMVEASPRRIFANAHT--YHINSISINS--DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTE 227 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEEECSCCS--SCCCEEEECT--TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCC
T ss_pred EeccccchheeeeccceEEeccCCC--cceEEEEEcC--CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCc
Confidence 12 24566 4599999999 99999998 79999999998432 111 001223333
Q ss_pred eEEEEEeecccCccceeccCCCCceeeecccCccc---cccCCCCC-------------C---cccCCCCCcEEEEecCC
Q 022870 110 SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETV---DTDSLCDS-------------K---DDVPAEGPKYMAVAGEQ 170 (291)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-------------~---~~~~~~~~~~~~~~g~~ 170 (291)
......+.+............+...+|+++..... ...+..|. . ++|+|++..++ +++.
T Consensus 228 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~--~~~~ 305 (447)
T 3dw8_B 228 VITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMM--TRDY 305 (447)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEE--EEES
T ss_pred ceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEE--EeeC
Confidence 45555555544334445556677888988776541 22333332 3 89999997655 5555
Q ss_pred cCeEEEEeCCC-cceeeEecccccCCCCCCCCCcce-----------eeeeEEEecCCCCCCceEEEeecCCCcEEEEEc
Q 022870 171 LSEVEIWDLNT-AERCTRLHQNSCGGSPNFSSKGRG-----------MCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 238 (291)
Q Consensus 171 d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~ 238 (291)
+.|++||+++ ++++..+. +|...... .+..+. |+|+ ++ +|++|+.||.|++||+
T Consensus 306 -~~v~iwd~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~~i~~~~~~~-~s~~---~~-~l~s~s~dg~v~iwd~ 371 (447)
T 3dw8_B 306 -LSVKVWDLNMENRPVETYQ--------VHEYLRSKLCSLYENDCIFDKFECC-WNGS---DS-VVMTGSYNNFFRMFDR 371 (447)
T ss_dssp -SEEEEEETTCCSSCSCCEE--------SCGGGTTTHHHHHHTSGGGCCCCEE-ECTT---SS-EEEEECSTTEEEEEET
T ss_pred -CeEEEEeCCCCccccceee--------ccccccccccccccccccccceEEE-ECCC---CC-EEEEeccCCEEEEEEc
Confidence 9999999997 77777777 45321110 123365 9998 44 8999999999999999
Q ss_pred cCCCCceeecc---------------------------------ccccceeEEEeecCCCeeEEecCCCeEEEEEcC
Q 022870 239 RNPGIPLTAMK---------------------------------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (291)
Q Consensus 239 ~~~~~~~~~~~---------------------------------~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~ 282 (291)
++ ++.+ .+. .+...|..++|+|++++||+++.++ +++|.-+
T Consensus 372 ~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 372 NT-KRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp TT-CCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred CC-Ccce-eeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 87 5443 221 2345789999999999999998776 7777643
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.3e-29 Score=197.28 Aligned_cols=209 Identities=11% Similarity=0.143 Sum_probs=148.8
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCC---------CCeEEEEEe-eecCCcceEEEEEeecCCCCe
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV---------QHRTVSSSW-VHSAAHGIVSVATGPSIGLNK 78 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~---------~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~ 78 (291)
+.+..+. ...|.++.|+|+ +++++.|++|++|+.. +++.+..+. .|. .+|.+++|+|..++++
T Consensus 69 ~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~ 141 (343)
T 3lrv_A 69 KTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSA--NEIIYMYGHNEVNTEY 141 (343)
T ss_dssp SCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCS--SCEEEEECCC---CCE
T ss_pred cEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCC--CCEEEEEcCCCCCCCE
Confidence 3344444 467888899988 9999999999999765 444444444 343 4599999999545689
Q ss_pred EEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCC
Q 022870 79 VISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPA 158 (291)
Q Consensus 79 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (291)
+++++.||+|++||+++++... ...........+ ++|+|
T Consensus 142 l~s~s~dg~i~~wd~~~~~~~~--~~~~~~~~~i~~---------------------------------------~~~~p 180 (343)
T 3lrv_A 142 FIWADNRGTIGFQSYEDDSQYI--VHSAKSDVEYSS---------------------------------------GVLHK 180 (343)
T ss_dssp EEEEETTCCEEEEESSSSCEEE--EECCCSSCCCCE---------------------------------------EEECT
T ss_pred EEEEeCCCcEEEEECCCCcEEE--EEecCCCCceEE---------------------------------------EEECC
Confidence 9999999999999999875421 000000000000 66999
Q ss_pred CCCcEEEEecCCcCeEEEEeCCCccee-eEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEE
Q 022870 159 EGPKYMAVAGEQLSEVEIWDLNTAERC-TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (291)
Q Consensus 159 ~~~~~~~~~g~~d~~i~~wd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (291)
++..++ +|+.||.|++||+++++.+ ..+.. +| ...+.++. |+|+ |. +|++++ |+.|++||
T Consensus 181 dg~~la--sg~~dg~i~iwd~~~~~~~~~~~~~-------~h----~~~v~~l~-fs~~---g~-~l~s~~-~~~v~iwd 241 (343)
T 3lrv_A 181 DSLLLA--LYSPDGILDVYNLSSPDQASSRFPV-------DE----EAKIKEVK-FADN---GY-WMVVEC-DQTVVCFD 241 (343)
T ss_dssp TSCEEE--EECTTSCEEEEESSCTTSCCEECCC-------CT----TSCEEEEE-ECTT---SS-EEEEEE-SSBEEEEE
T ss_pred CCCEEE--EEcCCCEEEEEECCCCCCCccEEec-------cC----CCCEEEEE-EeCC---CC-EEEEEe-CCeEEEEE
Confidence 986444 6778999999999999877 66661 25 45678887 9998 44 899998 55999999
Q ss_pred ccCCCCceeeccc---ccccee--EEEeecCCCeeEEecC-CCeEEEEEcCCCc
Q 022870 238 IRNPGIPLTAMKV---HLEPVL--CLSIDESCNGGISGGA-DQKIVLYNLDHST 285 (291)
Q Consensus 238 ~~~~~~~~~~~~~---h~~~v~--~~~~~~~~~~l~s~s~-dg~i~vw~~~~~~ 285 (291)
+++ .+.+..+.. |...+. +++|+|++++|++++. |+.|++|++++..
T Consensus 242 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 242 LRK-DVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp TTS-STTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred cCC-CCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 998 666555443 444554 5999999999999988 9999999996653
No 107
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-28 Score=201.82 Aligned_cols=199 Identities=8% Similarity=0.036 Sum_probs=149.6
Q ss_pred CCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecC---CcceEEEEEeecCCCCeEEEEeCCCeEEEEE
Q 022870 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA---AHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd 92 (291)
+|...|.+++|+|+|.+||+++.||+|++||.+. ++..+. |.. ...|.+++|+| +|++|++|+.||+|++||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP--DG~~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP--IESSIVVGNEDGELQFFS 157 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS--SSSCEEEEETTSEEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC--CCCEEEEEcCCCEEEEEE
Confidence 5688999999999999999999999999999543 666666 542 12499999999 999999999999999999
Q ss_pred CCCCCCCCC---CccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC----cccCCCCCcEEE
Q 022870 93 IENGGLSSN---PSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYMA 165 (291)
Q Consensus 93 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 165 (291)
+.++..... .+.+++.. ..+|.. ++|+|+| ++
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~--------------------------------------~~gh~~~V~sVawSPdg--La- 196 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLS--------------------------------------DAGSKDWVTHIVWYEDV--LV- 196 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECS--------------------------------------CTTCCCCEEEEEEETTE--EE-
T ss_pred CCCCccccccceeeeeeecc--------------------------------------cccccccEEEEEEcCCc--EE-
Confidence 998643110 01111100 001111 6799998 44
Q ss_pred EecCCcCeEEEEeCCCccee---eEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCC
Q 022870 166 VAGEQLSEVEIWDLNTAERC---TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (291)
Q Consensus 166 ~~g~~d~~i~~wd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~ 242 (291)
+++.|+.|++||+..++.. .++.. +| +..+.+++ |+ + + .|++++ ++.|++||+.+ +
T Consensus 197 -ass~D~tVrlWd~~~~~~~~~~~tL~~-------~h----~~~V~sva-Fs-g----~-~LASa~-~~tIkLWd~~~-~ 255 (588)
T 2j04_A 197 -AALSNNSVFSMTVSASSHQPVSRMIQN-------AS----RRKITDLK-IV-D----Y-KVVLTC-PGYVHKIDLKN-Y 255 (588)
T ss_dssp -EEETTCCEEEECCCSSSSCCCEEEEEC-------CC----SSCCCCEE-EE-T----T-EEEEEC-SSEEEEEETTT-T
T ss_pred -EEeCCCeEEEEECCCCccccceeeecc-------cc----cCcEEEEE-EE-C----C-EEEEEe-CCeEEEEECCC-C
Confidence 3445999999999887742 34531 33 34677776 98 2 2 788887 69999999996 5
Q ss_pred CceeeccccccceeEEEe--ecCCCeeEEecCCCeEEEEEcC
Q 022870 243 IPLTAMKVHLEPVLCLSI--DESCNGGISGGADQKIVLYNLD 282 (291)
Q Consensus 243 ~~~~~~~~h~~~v~~~~~--~~~~~~l~s~s~dg~i~vw~~~ 282 (291)
+......+|.+.|.+++| +|++..|++++.||+ ++|..+
T Consensus 256 ~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 256 SISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred eEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 553333389999999999 999999999999999 999986
No 108
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=1e-27 Score=187.20 Aligned_cols=214 Identities=18% Similarity=0.205 Sum_probs=152.3
Q ss_pred CceEEecCCccceeEEEEcC--CCCEEEEecCCCeEEEEeCCCCe--EEEEEeeecCCcceEEEEEeecCCCCeEEEEeC
Q 022870 9 DPVAVLRGHRASVTDVCFHQ--TKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~--~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (291)
+++.++.+|.++|++++|++ ++++|++|+.|++|++||+++++ .+..+..|... |.+++|+|..++.+|++++.
T Consensus 44 ~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~--v~~v~~~p~~~g~~l~s~s~ 121 (297)
T 2pm7_B 44 KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSAS--VNSVQWAPHEYGPMLLVASS 121 (297)
T ss_dssp CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSC--EEEEEECCGGGCSEEEEEET
T ss_pred EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCc--eeEEEeCcCCCCcEEEEEEC
Confidence 56789999999999999986 48899999999999999998764 55667777754 99999999212789999999
Q ss_pred CCeEEEEECCCCCCCCCCccccccceEEEEEeeccc------------CccceeccCCCCceeeecccCcc---ccccCC
Q 022870 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK------------EPYANAKQANEPKDCYEREVGET---VDTDSL 149 (291)
Q Consensus 85 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 149 (291)
|++|++||+++........+..+........+++.. ..........+...+|+++.... ....+.
T Consensus 122 d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~ 201 (297)
T 2pm7_B 122 DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE 201 (297)
T ss_dssp TSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC
T ss_pred CCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec
Confidence 999999999876432111222233344444444432 11233344556778888765441 334567
Q ss_pred CCCC----cccCCCC--CcEEEEecCCcCeEEEEeCCCcce--e-eEecccccCCCCCCCCCcceeeeeEEEecCCCCCC
Q 022870 150 CDSK----DDVPAEG--PKYMAVAGEQLSEVEIWDLNTAER--C-TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQG 220 (291)
Q Consensus 150 ~~~~----~~~~~~~--~~~~~~~g~~d~~i~~wd~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g 220 (291)
+|.. ++|+|++ ..+++ +++.|++|++||++.... . ..+... .| ...+.++. |+|+ |
T Consensus 202 ~H~~~V~~v~~sp~~~~~~~la-s~s~D~~v~iWd~~~~~~~~~~~~~~~~------~~----~~~v~~~~-~s~~---g 266 (297)
T 2pm7_B 202 GHSDWVRDVAWSPTVLLRSYMA-SVSQDRTCIIWTQDNEQGPWKKTLLKEE------KF----PDVLWRAS-WSLS---G 266 (297)
T ss_dssp CCSSCEEEEEECCCCSSSEEEE-EEETTSCEEEEEESSTTSCCEEEESSSS------CC----SSCEEEEE-ECSS---S
T ss_pred CCCCceEEEEECCCCCCceEEE-EEECCCcEEEEEeCCCCCccceeeeecc------cC----CCcEEEEE-ECCC---C
Confidence 7776 8999996 34555 677799999999987532 1 122100 23 45677887 9998 4
Q ss_pred ceEEEeecCCCcEEEEEccC
Q 022870 221 FVNVLAGYEDGSILVWDIRN 240 (291)
Q Consensus 221 ~~~l~~g~~dg~i~vwd~~~ 240 (291)
+ +|++++.||.|++|+...
T Consensus 267 ~-~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 267 N-VLALSGGDNKVTLWKENL 285 (297)
T ss_dssp C-CEEEEETTSCEEEEEECT
T ss_pred C-EEEEEcCCCcEEEEEECC
Confidence 4 899999999999999874
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-28 Score=201.34 Aligned_cols=199 Identities=7% Similarity=0.092 Sum_probs=148.1
Q ss_pred cCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEE-----------------------------EEEe-eecCCcc
Q 022870 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTV-----------------------------SSSW-VHSAAHG 64 (291)
Q Consensus 15 ~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-----------------------------~~~~-~~~~~~~ 64 (291)
+.-...|.+++|+|||+++||++.|++|+ |...++.+ ..+. .|. ..
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~--~~ 87 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPV--CY 87 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCS--CC
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCC--Cc
Confidence 44568899999999999999999999996 43332211 1111 232 56
Q ss_pred eEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCccccc-cc-----eEEEEEeecccCccceeccCCCCceeeec
Q 022870 65 IVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIK-TN-----SYHFCKLSLVKEPYANAKQANEPKDCYER 138 (291)
Q Consensus 65 v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (291)
|.+++|+| +|.+|++++.||.|++||.+. +.. .+. .. ... +
T Consensus 88 V~~vawSP--dG~~LAs~s~dg~V~iwd~~~--~l~----~l~~~~~~~~~sv~-s------------------------ 134 (588)
T 2j04_A 88 PRVCKPSP--IDDWMAVLSNNGNVSVFKDNK--MLT----NLDSKGNLSSRTYH-C------------------------ 134 (588)
T ss_dssp EEEEEECS--SSSCEEEEETTSCEEEEETTE--EEE----ECCCSSCSTTTCEE-E------------------------
T ss_pred EEEEEECC--CCCEEEEEeCCCcEEEEeCCc--eee----eccCCCccccccEE-E------------------------
Confidence 99999999 999999999999999999543 111 111 00 011 1
Q ss_pred ccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcce-------eeEecccccCCCCCCCCCcceeeeeEE
Q 022870 139 EVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAER-------CTRLHQNSCGGSPNFSSKGRGMCMAVQ 211 (291)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (291)
++|+|+|+.++ +|+.||+|++||+.++.. +.++. .|...+...+.+++
T Consensus 135 ---------------vafSPDG~~LA--sgs~DGtVkIWd~~~~~l~~~~~i~l~ti~--------~~~~gh~~~V~sVa 189 (588)
T 2j04_A 135 ---------------FEWNPIESSIV--VGNEDGELQFFSIRKNSENTPEFYFESSIR--------LSDAGSKDWVTHIV 189 (588)
T ss_dssp ---------------EEECSSSSCEE--EEETTSEEEEEECCCCTTTCCCCEEEEEEE--------CSCTTCCCCEEEEE
T ss_pred ---------------EEEcCCCCEEE--EEcCCCEEEEEECCCCccccccceeeeeee--------cccccccccEEEEE
Confidence 67999998765 567799999999998753 45554 23333356788997
Q ss_pred EecCCCCCCceEEEeecCCCcEEEEEccCCCCc---eeec-cccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCce
Q 022870 212 AYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP---LTAM-KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 212 ~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~---~~~~-~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~ 286 (291)
|+|+ | +++++.|+.|++||+.. +.. ...+ .+|...|.+++|+ +..||+++ ++.|++||+.+++.
T Consensus 190 -wSPd---g---Laass~D~tVrlWd~~~-~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 190 -WYED---V---LVAALSNNSVFSMTVSA-SSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp -EETT---E---EEEEETTCCEEEECCCS-SSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEE
T ss_pred -EcCC---c---EEEEeCCCeEEEEECCC-CccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeE
Confidence 9998 4 78888999999999987 442 3456 4788999999999 57889887 69999999998887
No 110
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=3.1e-27 Score=185.96 Aligned_cols=214 Identities=15% Similarity=0.239 Sum_probs=152.7
Q ss_pred CCceEEe--cCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecC------------------------
Q 022870 8 PDPVAVL--RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA------------------------ 61 (291)
Q Consensus 8 ~~~~~~l--~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~------------------------ 61 (291)
+++++.+ .+|...|++++|+|++++|++|+.||+|++||+++++++..+.+|..
T Consensus 55 g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~ 134 (318)
T 4ggc_A 55 GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHH 134 (318)
T ss_dssp CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEee
Confidence 4555555 47888999999999999999999999999999999887665543221
Q ss_pred ---------------CcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCcccccc--ceEEEEEeecccCccc
Q 022870 62 ---------------AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKT--NSYHFCKLSLVKEPYA 124 (291)
Q Consensus 62 ---------------~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 124 (291)
...+..+.+.+ ++.+|++++.||+|++||+++++........... .......+........
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 212 (318)
T 4ggc_A 135 DVRVAEHHVATLSGHSQEVCGLRWAP--DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVL 212 (318)
T ss_dssp ETTSSSCEEEEEECCSSCEEEEEECT--TSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEE
T ss_pred ecCCCceeEEEEcCccCceEEEEEcC--CCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEE
Confidence 13477778888 8899999999999999999987654322222222 2223333333222222
Q ss_pred ee--ccCCCCceeeecccCccccccCCCCCC--cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCC
Q 022870 125 NA--KQANEPKDCYEREVGETVDTDSLCDSK--DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFS 200 (291)
Q Consensus 125 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 200 (291)
.. ........+|+................ +.|+|++..+++++|+.|+.|++||+++++++..+. +|.
T Consensus 213 ~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~--------gH~ 284 (318)
T 4ggc_A 213 ATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK--------GHT 284 (318)
T ss_dssp EEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC--------CCS
T ss_pred EEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEc--------CCC
Confidence 11 122234555666555443332222222 889999999888788889999999999999999998 774
Q ss_pred CCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccC
Q 022870 201 SKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (291)
Q Consensus 201 ~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~ 240 (291)
..+.+++ |+|+ |+ +|++|+.||.|+|||+.+
T Consensus 285 ----~~V~~l~-~spd---g~-~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 285 ----SRVLSLT-MSPD---GA-TVASAAADETLRLWRCFE 315 (318)
T ss_dssp ----SCEEEEE-ECTT---SS-CEEEEETTTEEEEECCSC
T ss_pred ----CCEEEEE-EcCC---CC-EEEEEecCCeEEEEECCC
Confidence 4678887 9998 44 899999999999999976
No 111
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=5.3e-27 Score=192.59 Aligned_cols=242 Identities=11% Similarity=0.025 Sum_probs=176.2
Q ss_pred EecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEE-EEeCCCeEEEE
Q 022870 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCW 91 (291)
Q Consensus 13 ~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~iw 91 (291)
.+.+|.+.|.+++|++++.++++++.|+.|++||+++++.+..+..|... +.+++|+| +++.++ +++.|+.|++|
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~l~~~~~~~~~i~~~ 239 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKW--SKILLYDP--IRDLVYCSNWISEDISVI 239 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSS--EEEEEEET--TTTEEEEEETTTTEEEEE
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCC--eeEEEEcC--CCCEEEEEecCCCcEEEE
Confidence 45689999999999999999999999999999999999999888877744 99999999 888775 55589999999
Q ss_pred ECCCCCCCCCCcccccc-ceEEEEEeecccCccceecc-------CCCCceeeecccCccccccC-CCCCC-cccCCCCC
Q 022870 92 DIENGGLSSNPSLTIKT-NSYHFCKLSLVKEPYANAKQ-------ANEPKDCYEREVGETVDTDS-LCDSK-DDVPAEGP 161 (291)
Q Consensus 92 d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~ 161 (291)
|+++++... .+.. .......+++.......... ..+....|++.......... ..... ++|+|+++
T Consensus 240 d~~~~~~~~----~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~ 315 (433)
T 3bws_A 240 DRKTKLEIR----KTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTEN 315 (433)
T ss_dssp ETTTTEEEE----ECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTT
T ss_pred ECCCCcEEE----EecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCC
Confidence 998876432 2222 12233333333322222222 12344567766554332211 11111 88999998
Q ss_pred cEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecC------------
Q 022870 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE------------ 229 (291)
Q Consensus 162 ~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~------------ 229 (291)
.+++ +++.|+.|++||+++++....+.. ...+.++. |+|+ |+ ++++++.
T Consensus 316 ~l~~-~~~~~~~v~v~d~~~~~~~~~~~~-------------~~~~~~~~-~s~d---g~-~l~~~~~~~~~~~~~~~~~ 376 (433)
T 3bws_A 316 KIYV-SDMCCSKIEVYDLKEKKVQKSIPV-------------FDKPNTIA-LSPD---GK-YLYVSCRGPNHPTEGYLKK 376 (433)
T ss_dssp EEEE-EETTTTEEEEEETTTTEEEEEEEC-------------SSSEEEEE-ECTT---SS-EEEEEECCCCCTTTCTTSC
T ss_pred EEEE-EecCCCEEEEEECCCCcEEEEecC-------------CCCCCeEE-EcCC---CC-EEEEEecCCCccccccccc
Confidence 7766 556689999999999888777752 23356676 9998 44 6666655
Q ss_pred ---CCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecC-CCeEEEEEcCC
Q 022870 230 ---DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA-DQKIVLYNLDH 283 (291)
Q Consensus 230 ---dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-dg~i~vw~~~~ 283 (291)
||.|++||+.+ ++.+..+.. ...+.+++|+|++++|++++. |+.|++|+++.
T Consensus 377 g~~dg~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 377 GLVLGKVYVIDTTT-DTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CSSCCEEEEEETTT-TEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred cccceEEEEEECCC-CcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 57999999998 777777776 457899999999999987764 99999999874
No 112
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=1e-27 Score=191.04 Aligned_cols=208 Identities=12% Similarity=0.102 Sum_probs=154.0
Q ss_pred eEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCc-cccccceEEEEEeecccCccceeccC
Q 022870 51 RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPS-LTIKTNSYHFCKLSLVKEPYANAKQA 129 (291)
Q Consensus 51 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (291)
+++..+.+|.. ..|.+++|+| ++.+|++|+.|++|++||+.++....... ...+........+++.... ......
T Consensus 6 ~~~~~~~~h~~-~~v~~l~~sp--~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~-l~s~s~ 81 (345)
T 3fm0_A 6 VLLGRVPAHPD-SRCWFLAWNP--AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNY-LASASF 81 (345)
T ss_dssp EEEEEECCSTT-SCEEEEEECT--TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSE-EEEEET
T ss_pred EEeeeecCCCC-CcEEEEEECC--CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCE-EEEEEC
Confidence 56677888875 2599999999 99999999999999999998764321101 1223344555555554322 233344
Q ss_pred CCCceeeecccCc-cccccCCCCCC----cccCCCCCcEEEEecCCcCeEEEEeCCCcce---eeEecccccCCCCCCCC
Q 022870 130 NEPKDCYEREVGE-TVDTDSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAER---CTRLHQNSCGGSPNFSS 201 (291)
Q Consensus 130 ~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~ 201 (291)
.+...+|++.... .....+.+|.. ++|+|+++.++ +|+.|+.|++||++++.. +..+. +|
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~--s~s~D~~v~iwd~~~~~~~~~~~~~~--------~h-- 149 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLA--TCSRDKSVWVWEVDEEDEYECVSVLN--------SH-- 149 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEE--EEETTSCEEEEEECTTSCEEEEEEEC--------CC--
T ss_pred CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEE--EEECCCeEEEEECCCCCCeEEEEEec--------Cc--
Confidence 5567778776554 23445667766 89999997554 677799999999987643 34444 55
Q ss_pred CcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCC--ceeeccccccceeEEEeecCCCeeEEecCCCeEEEE
Q 022870 202 KGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI--PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLY 279 (291)
Q Consensus 202 ~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw 279 (291)
...+.++. |+|+ ++ +|++|+.|+.|++||.++ +. +...+.+|...|++++|+|++++|++++.|++|++|
T Consensus 150 --~~~v~~~~-~~p~---~~-~l~s~s~d~~i~~w~~~~-~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW 221 (345)
T 3fm0_A 150 --TQDVKHVV-WHPS---QE-LLASASYDDTVKLYREEE-DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221 (345)
T ss_dssp --CSCEEEEE-ECSS---SS-CEEEEETTSCEEEEEEET-TEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred --CCCeEEEE-ECCC---CC-EEEEEeCCCcEEEEEecC-CCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEe
Confidence 34567776 9998 44 899999999999999987 43 457889999999999999999999999999999999
Q ss_pred EcC
Q 022870 280 NLD 282 (291)
Q Consensus 280 ~~~ 282 (291)
+..
T Consensus 222 ~~~ 224 (345)
T 3fm0_A 222 RQY 224 (345)
T ss_dssp EEE
T ss_pred ccc
Confidence 963
No 113
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.4e-28 Score=199.34 Aligned_cols=223 Identities=13% Similarity=0.077 Sum_probs=129.6
Q ss_pred CCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEE-----EEeeecCCcceEEEEEeec------CCCCeEEEEeC
Q 022870 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVS-----SSWVHSAAHGIVSVATGPS------IGLNKVISQGR 84 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-----~~~~~~~~~~v~~~~~~~~------~~~~~l~s~~~ 84 (291)
.|...+....+.+++.+|++|+.|++|+|||..+++... .+.+|... |.+++|+|. .++++|++|+.
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~--v~~v~~~p~~~~~~~~d~~~las~s~ 164 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNF--VNDIDIADVYSADNRLAEQVIASVGD 164 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSC--EEEEEEEEEECTTCSEEEEEEEEEET
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCc--eEEEEEccccccccCCCCCEEEEEEC
Confidence 344444445555677789999999999999998876543 24567755 999999872 15689999999
Q ss_pred CCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEE
Q 022870 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (291)
Q Consensus 85 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
|++|+|||++++.... ......... .. ++|+|++..++
T Consensus 165 D~tv~~Wd~~~~~~~~--~~~~~~~~v-~~---------------------------------------v~~~p~~~~~l 202 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPIL--AGYPLSSPG-IS---------------------------------------VQFRPSNPNQL 202 (393)
T ss_dssp TSEEEEEEEETTEEEE--EEEECSSCE-EE---------------------------------------EEEETTEEEEE
T ss_pred CCeEEEEECCCCceee--eecCCCCCc-EE---------------------------------------EEECCCCCceE
Confidence 9999999998764321 000011111 11 56999987666
Q ss_pred EEecCCcCeEEEEeCCCcceeeEecccccC-------------CCCCCCCCcceeeeeEEEec-CCCCCCceEEEeecCC
Q 022870 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCG-------------GSPNFSSKGRGMCMAVQAYL-PSKSQGFVNVLAGYED 230 (291)
Q Consensus 165 ~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~-p~~~~g~~~l~~g~~d 230 (291)
+ +|+.|+.|++||+++++........... ............+.++. |. |+ |+ .|++++.|
T Consensus 203 ~-~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~-~~~~d---g~-~l~s~s~d 276 (393)
T 4gq1_A 203 I-VGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVR-WIGSD---GS-GILAMCKS 276 (393)
T ss_dssp E-EEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEE-EETTT---TC-EEEEECTT
T ss_pred E-ecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeee-eecCC---CC-EEEEEeCC
Confidence 6 5777999999999987655433210000 00000011223455565 65 55 55 89999999
Q ss_pred CcEEEEEccCCCCceeeccccccceeEEEee--------------------cCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 231 GSILVWDIRNPGIPLTAMKVHLEPVLCLSID--------------------ESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 231 g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~--------------------~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
+.+++||+.. ++....+..|...+..+.+. .++.++++|+.||.|++||+++++....
T Consensus 277 ~~i~vwd~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~ 354 (393)
T 4gq1_A 277 GAWLRWNLFA-NNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSI 354 (393)
T ss_dssp SEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEE
T ss_pred CCEEEEECcc-CCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 9999999987 66555555555444443332 2455678899999999999999877654
No 114
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=6.3e-27 Score=192.11 Aligned_cols=254 Identities=8% Similarity=0.015 Sum_probs=183.6
Q ss_pred ceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEE-----eeecCCcceEEEEEeecCCCCeEEEEeC
Q 022870 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSS-----WVHSAAHGIVSVATGPSIGLNKVISQGR 84 (291)
Q Consensus 10 ~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (291)
.+..+..+ ..+.+++|+|++.++++++.|+.|++||+.+++....+ ..|. ..|.+++|+| ++.++++++.
T Consensus 115 ~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~~~s~~~ 189 (433)
T 3bws_A 115 FISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKL--GFVETISIPE--HNELWVSQMQ 189 (433)
T ss_dssp EEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTC--CEEEEEEEGG--GTEEEEEEGG
T ss_pred EEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccC--CceeEEEEcC--CCEEEEEECC
Confidence 34445544 44669999998888889999999999999999887643 2444 4599999999 8899999999
Q ss_pred CCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC---cccCCCCC
Q 022870 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK---DDVPAEGP 161 (291)
Q Consensus 85 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 161 (291)
|+.|++||+++++... .+..+........+++............+....|++........ +..+.. ++|+|+++
T Consensus 190 d~~v~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~g~ 266 (433)
T 3bws_A 190 ANAVHVFDLKTLAYKA--TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK-TDKIGLPRGLLLSKDGK 266 (433)
T ss_dssp GTEEEEEETTTCCEEE--EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE-CCCCSEEEEEEECTTSS
T ss_pred CCEEEEEECCCceEEE--EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE-ecCCCCceEEEEcCCCC
Confidence 9999999998876533 22222334444455544433333333456677778766554332 222222 89999998
Q ss_pred cEEEEecC------CcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEE
Q 022870 162 KYMAVAGE------QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 235 (291)
Q Consensus 162 ~~~~~~g~------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~v 235 (291)
.+++++.. .|+.|++||+++++....+. ....+..+. |+|+ ++.++++++.|+.|++
T Consensus 267 ~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-------------~~~~~~~~~-~~~~---g~~l~~~~~~~~~v~v 329 (433)
T 3bws_A 267 ELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-------------PPGNKRHIV-SGNT---ENKIYVSDMCCSKIEV 329 (433)
T ss_dssp EEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-------------EEECEEEEE-ECSS---TTEEEEEETTTTEEEE
T ss_pred EEEEEECCCCccccCCCeEEEEECCCCcEEeecc-------------CCCCcceEE-ECCC---CCEEEEEecCCCEEEE
Confidence 77653321 47899999999988776664 133456676 9998 4436778899999999
Q ss_pred EEccCCCCceeeccccccceeEEEeecCCCeeEEecC---------------CCeEEEEEcCCCceeeee
Q 022870 236 WDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA---------------DQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 236 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---------------dg~i~vw~~~~~~~~~~~ 290 (291)
||+++ ++.+..+. +...+.+++|+|++++|++++. ||.|++||+.+++.+..+
T Consensus 330 ~d~~~-~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 330 YDLKE-KKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp EETTT-TEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE
T ss_pred EECCC-CcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEe
Confidence 99997 77776665 6778999999999998887776 579999999998877653
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=4.8e-26 Score=182.04 Aligned_cols=232 Identities=9% Similarity=0.036 Sum_probs=166.1
Q ss_pred ceeEEEEcCCCCEE-EEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCC-C
Q 022870 20 SVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG-G 97 (291)
Q Consensus 20 ~v~~l~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~ 97 (291)
.+..+++.++++.+ ++|+.|++|++||..+++++..+. +. .+|.+++|++ + .++++ .|+.|++||+.+. +
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~--~~v~~v~~~~--~--~~~~~-~~~~i~i~d~~~~~~ 131 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VD--APVKDLFLSR--E--FIVVS-YGDVISVFKFGNPWK 131 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CS--SCEEEEEECS--S--EEEEE-ETTEEEEEESSTTCC
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CC--CceEEEEEcC--C--EEEEE-EcCEEEEEECCCCce
Confidence 57888999887777 578888999999999999998887 44 4599999998 4 44444 4789999999987 5
Q ss_pred CCCCCccccccceEEEEEeecccCcccee-ccCCCCceeeecccCcc--------------c-cccCCCCCC----cccC
Q 022870 98 LSSNPSLTIKTNSYHFCKLSLVKEPYANA-KQANEPKDCYEREVGET--------------V-DTDSLCDSK----DDVP 157 (291)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------------~-~~~~~~~~~----~~~~ 157 (291)
... .+.. ....+.+++ ...... ....+...+|++..... . ...+.+|.. ++|+
T Consensus 132 ~~~----~~~~-~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s 204 (355)
T 3vu4_A 132 RIT----DDIR-FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN 204 (355)
T ss_dssp BSS----CCEE-EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEEC
T ss_pred eeE----Eecc-CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEEC
Confidence 433 2222 333333433 112222 34556777888876431 1 345667766 8999
Q ss_pred CCCCcEEEEecCCcCe-EEEEeCCCcceeeEecccccCCCCC-CCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEE
Q 022870 158 AEGPKYMAVAGEQLSE-VEIWDLNTAERCTRLHQNSCGGSPN-FSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 235 (291)
Q Consensus 158 ~~~~~~~~~~g~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~v 235 (291)
|++..++ +|+.|++ |++||+++++++..+.. + | ...+.+++ |+|+ |+ +|++|+.|+.|++
T Consensus 205 ~~g~~l~--s~s~d~~~v~iwd~~~~~~~~~~~~-------g~h----~~~v~~~~-~s~~---~~-~l~s~s~d~~v~i 266 (355)
T 3vu4_A 205 RKSDMVA--TCSQDGTIIRVFKTEDGVLVREFRR-------GLD----RADVVDMK-WSTD---GS-KLAVVSDKWTLHV 266 (355)
T ss_dssp TTSSEEE--EEETTCSEEEEEETTTCCEEEEEEC-------TTC----CSCEEEEE-ECTT---SC-EEEEEETTCEEEE
T ss_pred CCCCEEE--EEeCCCCEEEEEECCCCcEEEEEEc-------CCC----CCcEEEEE-ECCC---CC-EEEEEECCCEEEE
Confidence 9997554 6777998 99999999999988873 2 4 45678887 9998 44 9999999999999
Q ss_pred EEccCCCC-ceeecc---------------------ccccceeEEEeecCCCeeEEecCCCeEEEEEcCCC
Q 022870 236 WDIRNPGI-PLTAMK---------------------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 236 wd~~~~~~-~~~~~~---------------------~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~ 284 (291)
||++.... ....+. .+......++|++++++|++++.||.+++|++..+
T Consensus 267 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 267 FEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp EESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred EEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 99976321 111111 11223477999999999999999999999998654
No 116
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=2.3e-26 Score=184.55 Aligned_cols=249 Identities=9% Similarity=0.034 Sum_probs=166.3
Q ss_pred ccceeEEEEcCCCCEEEEecCC-------CeEEEEeCCCCe--------EEEE--EeeecCCcceEEEEEeecCCCCeEE
Q 022870 18 RASVTDVCFHQTKPILFAGTTG-------GELRIWDTVQHR--------TVSS--SWVHSAAHGIVSVATGPSIGLNKVI 80 (291)
Q Consensus 18 ~~~v~~l~~~~~~~~l~s~~~d-------g~v~iwd~~~~~--------~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~ 80 (291)
.-||++++|+|++++|++|+.| +.|++|++..+. .... +..|. ..|.++++.+ +.++
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~--~~v~s~~~~~----~~~~ 87 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDND--DSPTAIDASK----GIIL 87 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTS--CCCCEEEEET----TEEE
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCC--CceEEEEeCC----CEEE
Confidence 4589999999999999998754 369999987542 1222 33344 4488887755 5555
Q ss_pred EE-----------eCCCeEEEEECCCCCCCCCCcccc-------ccceEEEEEeecccCccceecc-CCCCceeeecccC
Q 022870 81 SQ-----------GRDGTVKCWDIENGGLSSNPSLTI-------KTNSYHFCKLSLVKEPYANAKQ-ANEPKDCYEREVG 141 (291)
Q Consensus 81 s~-----------~~dg~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 141 (291)
+| +.|+.+++|++............. .........+++.......+.. ......+|++...
T Consensus 88 ~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~ 167 (365)
T 4h5i_A 88 VGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL 167 (365)
T ss_dssp EECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT
T ss_pred EEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC
Confidence 54 457889999987653211100000 1112334455555444333222 3456778888776
Q ss_pred ccccccCCCCCC--cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCC
Q 022870 142 ETVDTDSLCDSK--DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ 219 (291)
Q Consensus 142 ~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 219 (291)
.........+.- ++|+|+|..++ +++ ++.+++|+..+++.+...... +| ...+.++. |+|+
T Consensus 168 ~~~~~~~~~~~V~~v~fspdg~~l~--s~s-~~~~~~~~~~~~~~~~~~~~~------~~----~~~v~~v~-fspd--- 230 (365)
T 4h5i_A 168 TEKFEIETRGEVKDLHFSTDGKVVA--YIT-GSSLEVISTVTGSCIARKTDF------DK----NWSLSKIN-FIAD--- 230 (365)
T ss_dssp EEEEEEECSSCCCEEEECTTSSEEE--EEC-SSCEEEEETTTCCEEEEECCC------CT----TEEEEEEE-EEET---
T ss_pred cEEEEeCCCCceEEEEEccCCceEE--ecc-ceeEEEEEeccCcceeeeecC------CC----CCCEEEEE-EcCC---
Confidence 654432211111 99999997554 455 466788888877765544321 23 45677887 9998
Q ss_pred CceEEEeecCCC----cEEEEEccCCCC---ceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 220 GFVNVLAGYEDG----SILVWDIRNPGI---PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 220 g~~~l~~g~~dg----~i~vwd~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+. ++++++.|+ .+++||+..... ....+.+|...|++++|+|+|++||+|+.|+.|+|||++++++++++
T Consensus 231 g~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 231 DT-VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF 307 (365)
T ss_dssp TE-EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CC-EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe
Confidence 44 888888776 688999876222 23457789999999999999999999999999999999999988764
No 117
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=1.5e-26 Score=183.75 Aligned_cols=221 Identities=14% Similarity=0.171 Sum_probs=155.7
Q ss_pred CCCeEEEEEeeecCCcceEEEEEeecCC-CCeEEEEeCCCeEEEEECCCCCCCCC-Ccccc--ccceEEEEEeecccCcc
Q 022870 48 VQHRTVSSSWVHSAAHGIVSVATGPSIG-LNKVISQGRDGTVKCWDIENGGLSSN-PSLTI--KTNSYHFCKLSLVKEPY 123 (291)
Q Consensus 48 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~ 123 (291)
++.++..++++|.+. |++|+|+| + +++|+||+.|++|++||+.+.+.... +...+ +........+++.....
T Consensus 26 ~~~~l~~tL~GH~~~--V~~v~~sp--~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l 101 (340)
T 4aow_A 26 EQMTLRGTLKGHNGW--VTQIATTP--QFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFA 101 (340)
T ss_dssp CEEEEEEEECCCSSC--EEEEEECT--TCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CceEEEEEECCccCC--EEEEEEeC--CCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEE
Confidence 334566779999865 99999999 6 57999999999999999987654221 11122 23344444444433222
Q ss_pred ceeccCCCCceeeecccCccccccCCCCCC---cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCC
Q 022870 124 ANAKQANEPKDCYEREVGETVDTDSLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFS 200 (291)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 200 (291)
......+....++................ ..+++++..++ +|+.|+.+++||+........... +|
T Consensus 102 -~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--s~s~d~~~~~~d~~~~~~~~~~~~-------~~- 170 (340)
T 4aow_A 102 -LSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV--SGSRDKTIKLWNTLGVCKYTVQDE-------SH- 170 (340)
T ss_dssp -EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEE--EEETTSCEEEECTTSCEEEEECSS-------SC-
T ss_pred -EEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccce--eecCCCeEEEEEeCCCceEEEEec-------cc-
Confidence 22223344455555554433333222222 67788887655 677799999999987654433321 44
Q ss_pred CCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEE
Q 022870 201 SKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 280 (291)
Q Consensus 201 ~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~ 280 (291)
...+..+. |+++.. .. ++++++.|+.|++||+++ .+.+..+.+|.+.|++++|+|++++|++|+.||.|++||
T Consensus 171 ---~~~v~~~~-~~~~~~-~~-~~~s~~~d~~i~i~d~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd 243 (340)
T 4aow_A 171 ---SEWVSCVR-FSPNSS-NP-IIVSCGWDKLVKVWNLAN-CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 243 (340)
T ss_dssp ---SSCEEEEE-ECSCSS-SC-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred ---cCcccceE-EccCCC-Cc-EEEEEcCCCEEEEEECCC-CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 33455665 888743 33 789999999999999998 888899999999999999999999999999999999999
Q ss_pred cCCCceeeee
Q 022870 281 LDHSTVSHCV 290 (291)
Q Consensus 281 ~~~~~~~~~~ 290 (291)
+++.+.++.+
T Consensus 244 ~~~~~~~~~~ 253 (340)
T 4aow_A 244 LNEGKHLYTL 253 (340)
T ss_dssp TTTTEEEEEE
T ss_pred eccCceeeee
Confidence 9998877653
No 118
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=9.6e-27 Score=183.22 Aligned_cols=211 Identities=16% Similarity=0.135 Sum_probs=145.1
Q ss_pred ceEEecCCccceeEEEEcC--CCCEEEEecCCCeEEEEeCCCC--eEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC
Q 022870 10 PVAVLRGHRASVTDVCFHQ--TKPILFAGTTGGELRIWDTVQH--RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (291)
Q Consensus 10 ~~~~l~~h~~~v~~l~~~~--~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (291)
++.++++|.++|++++|++ ++++|++|+.|++|++||++++ +....+..|... |.+++|+|..++.+|++|+.|
T Consensus 49 ~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~--V~~v~~~p~~~g~~lasgs~D 126 (316)
T 3bg1_A 49 LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSS--VNSVCWAPHDYGLILACGSSD 126 (316)
T ss_dssp EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSC--CCEEEECCTTTCSCEEEECSS
T ss_pred EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCc--eEEEEECCCCCCcEEEEEcCC
Confidence 4678999999999999986 4889999999999999999876 456667778754 999999992227899999999
Q ss_pred CeEEEEECCCCCCCC-CCccccccceEEEEEeecccC----------------ccceeccCCCCceeeecccCc--cccc
Q 022870 86 GTVKCWDIENGGLSS-NPSLTIKTNSYHFCKLSLVKE----------------PYANAKQANEPKDCYEREVGE--TVDT 146 (291)
Q Consensus 86 g~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~--~~~~ 146 (291)
++|++||++...... ......+........+.+... .............+|++.... ....
T Consensus 127 ~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 206 (316)
T 3bg1_A 127 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQ 206 (316)
T ss_dssp SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEE
T ss_pred CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceee
Confidence 999999998653110 001111222222222222210 112223344567778875432 2344
Q ss_pred cCCCCCC----cccCCCC---CcEEEEecCCcCeEEEEeCCCcc----eeeEecccccCCCCCCCCCcceeeeeEEEecC
Q 022870 147 DSLCDSK----DDVPAEG---PKYMAVAGEQLSEVEIWDLNTAE----RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP 215 (291)
Q Consensus 147 ~~~~~~~----~~~~~~~---~~~~~~~g~~d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 215 (291)
.+.+|.. ++|+|++ ..+++ +++.|++|++||+++.. ....+. .| ...+.+++ |+|
T Consensus 207 ~l~~h~~~V~~v~~sp~~~~~~~~la-s~s~D~~v~iw~~~~~~~~~~~~~~~~--------~~----~~~v~~v~-~sp 272 (316)
T 3bg1_A 207 KLEAHSDWVRDVAWAPSIGLPTSTIA-SCSQDGRVFIWTCDDASSNTWSPKLLH--------KF----NDVVWHVS-WSI 272 (316)
T ss_dssp CCBCCSSCEEEEECCCCSSCSCCEEE-EEETTCEEEEEECSSTTCCCCBCCEEE--------EC----SSCEEEEE-ECT
T ss_pred ecccCCCceEEEEecCCCCCCCceEE-EEcCCCeEEEEEccCccccchhhhhhh--------cC----CCcEEEEE-EcC
Confidence 5667766 8999986 23454 67779999999998631 112222 33 34678887 999
Q ss_pred CCCCCceEEEeecCCCcEEEEEccC
Q 022870 216 SKSQGFVNVLAGYEDGSILVWDIRN 240 (291)
Q Consensus 216 ~~~~g~~~l~~g~~dg~i~vwd~~~ 240 (291)
+ ++ +|++|+.||.|++|+...
T Consensus 273 ~---g~-~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 273 T---AN-ILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp T---TC-CEEEEESSSCEEEEEECT
T ss_pred C---CC-EEEEEcCCCeEEEEEECC
Confidence 8 44 899999999999999864
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1.1e-25 Score=182.35 Aligned_cols=231 Identities=11% Similarity=0.089 Sum_probs=171.0
Q ss_pred CEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeE-EEEeCCCeEEEEECCCCCCCCCCccccccc
Q 022870 31 PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDGTVKCWDIENGGLSSNPSLTIKTN 109 (291)
Q Consensus 31 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 109 (291)
.++++++.|+.|++||+.+++.+..+..|. .+.+++|+| +++++ ++++.|+.|++||+.+++... .+....
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~---~~~~~~~s~--dg~~l~~~~~~d~~i~v~d~~~~~~~~--~~~~~~- 74 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS---NPMGAVISP--DGTKVYVANAHSNDVSIIDTATNNVIA--TVPAGS- 74 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS---SEEEEEECT--TSSEEEEEEGGGTEEEEEETTTTEEEE--EEECSS-
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC---CcceEEECC--CCCEEEEECCCCCeEEEEECCCCeEEE--EEECCC-
Confidence 467899999999999999999998887663 389999999 88876 677799999999998876543 222222
Q ss_pred eEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC---cccCCCCCcEEEEecCCcCeEEEEeCCCcceee
Q 022870 110 SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCT 186 (291)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~ 186 (291)
......+++................+|++.......... .+.. ++|+|+++.+++ +++.|+.|++||+++++.+.
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~-~~~~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK-TGKSPLGLALSPDGKKLYV-TNNGDKTVSVINTVTKAVIN 152 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEE-EETTTTEEEEEETTTTEEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe-CCCCcceEEECCCCCEEEE-EeCCCCEEEEEECCCCcEEE
Confidence 334444444443333333344667778877665433322 2223 899999987655 56678999999999998888
Q ss_pred EecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCe
Q 022870 187 RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG 266 (291)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 266 (291)
.+. .+ ..+..+. |+|+ ++.++++++.++.|++||+++ ++.+..+. +...+.+++|+|++++
T Consensus 153 ~~~--------~~-----~~~~~~~-~~~d---g~~l~~~~~~~~~v~~~d~~~-~~~~~~~~-~~~~~~~~~~~~~g~~ 213 (391)
T 1l0q_A 153 TVS--------VG-----RSPKGIA-VTPD---GTKVYVANFDSMSISVIDTVT-NSVIDTVK-VEAAPSGIAVNPEGTK 213 (391)
T ss_dssp EEE--------CC-----SSEEEEE-ECTT---SSEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSEEEEEEECTTSSE
T ss_pred EEe--------cC-----CCcceEE-ECCC---CCEEEEEeCCCCEEEEEECCC-CeEEEEEe-cCCCccceEECCCCCE
Confidence 776 32 1235665 9998 442457888999999999998 66666665 4668899999999999
Q ss_pred eEEec---CCCeEEEEEcCCCceeeee
Q 022870 267 GISGG---ADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 267 l~s~s---~dg~i~vw~~~~~~~~~~~ 290 (291)
|++++ .++.|++||+++++.+..+
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~~~~~~~ 240 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTNKITARI 240 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTTEEEEEE
T ss_pred EEEEecCcCCCcEEEEECCCCeEEEEE
Confidence 98887 6899999999998876543
No 120
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=2.5e-26 Score=182.76 Aligned_cols=216 Identities=13% Similarity=0.176 Sum_probs=148.0
Q ss_pred CceEEecCCccceeEEEEcC--CCCEEEEecCCCeEEEEeCCCC---------eEEEEEeeecCCcceEEEEEeecCC--
Q 022870 9 DPVAVLRGHRASVTDVCFHQ--TKPILFAGTTGGELRIWDTVQH---------RTVSSSWVHSAAHGIVSVATGPSIG-- 75 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~--~~~~l~s~~~dg~v~iwd~~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~-- 75 (291)
++...+.+|...|++++|+| ++.+|++|+.||.|++||+.++ +.+..+..|... |.+++|+| +
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~--~~~ 123 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGS--LYSVKFAP--AHL 123 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSC--EEEEEECC--GGG
T ss_pred eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCc--eeEEEEcC--CCC
Confidence 45778889999999999999 6999999999999999999876 567778778755 99999999 7
Q ss_pred CCeEEEEeCCCeEEEEECCCCCCCCCCccc-----------cccceEEEEEeeccc-Ccc-ceeccCCCCceeeecccCc
Q 022870 76 LNKVISQGRDGTVKCWDIENGGLSSNPSLT-----------IKTNSYHFCKLSLVK-EPY-ANAKQANEPKDCYEREVGE 142 (291)
Q Consensus 76 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~ 142 (291)
+.+|++++.||.|++||+++.+........ ..........+.+.. ... ............+......
T Consensus 124 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~ 203 (351)
T 3f3f_A 124 GLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK 203 (351)
T ss_dssp CSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC
T ss_pred CcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc
Confidence 899999999999999999988754421100 011112222222220 011 1111222222222222222
Q ss_pred -cccccCCCCCC----cccCCCCC---cEEEEecCCcCeEEEEeCCCc--------------------------------
Q 022870 143 -TVDTDSLCDSK----DDVPAEGP---KYMAVAGEQLSEVEIWDLNTA-------------------------------- 182 (291)
Q Consensus 143 -~~~~~~~~~~~----~~~~~~~~---~~~~~~g~~d~~i~~wd~~~~-------------------------------- 182 (291)
.....+.+|.. ++|+|++. .+++ +|+.||.|++||++.+
T Consensus 204 ~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (351)
T 3f3f_A 204 LHVAAKLPGHKSLIRSISWAPSIGRWYQLIA-TGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDS 282 (351)
T ss_dssp EEEEEECCCCCSCEEEEEECCCSSCSSEEEE-EEETTSCEEEEEEEECC-------------------------------
T ss_pred eeeeeecCCCCcceeEEEECCCCCCcceEEE-EEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccc
Confidence 22445556655 89999984 3444 6677999999999875
Q ss_pred --------------ceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceee
Q 022870 183 --------------ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (291)
Q Consensus 183 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~ 247 (291)
+.+..+. +| ...+.++. |+|+ ++ +|++|+.||.|++||+.+ ++.+..
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~--------~h----~~~v~~~~-~s~~---~~-~l~s~~~dg~v~iw~~~~-~~~~~~ 343 (351)
T 3f3f_A 283 NTEEKAELQSNLQVELLSEHD--------DH----NGEVWSVS-WNLT---GT-ILSSAGDDGKVRLWKATY-SNEFKC 343 (351)
T ss_dssp --------CCSEEEEEEEEEC--------TT----SSCEEEEE-ECSS---SC-CEEEEETTSCEEEEEECT-TSCEEE
T ss_pred ccceeeeecccccccEEEEEe--------cc----cccEEEEE-EcCC---CC-EEEEecCCCcEEEEecCc-Ccchhh
Confidence 2333333 44 44678887 9998 44 899999999999999997 544433
No 121
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=1.6e-25 Score=183.59 Aligned_cols=244 Identities=11% Similarity=0.130 Sum_probs=170.1
Q ss_pred cceeEEEEcCCC----------CEEEEecC----CCeEEEEeCC--------------------------CCeE-EEEEe
Q 022870 19 ASVTDVCFHQTK----------PILFAGTT----GGELRIWDTV--------------------------QHRT-VSSSW 57 (291)
Q Consensus 19 ~~v~~l~~~~~~----------~~l~s~~~----dg~v~iwd~~--------------------------~~~~-~~~~~ 57 (291)
-+..++.|.|+. .+++.|+. ...|.+.++. +++. .....
T Consensus 46 wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 125 (430)
T 2xyi_A 46 WPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKI 125 (430)
T ss_dssp SCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEE
T ss_pred CCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEE
Confidence 356788888854 35777654 3456666532 1111 23344
Q ss_pred eecCCcceEEEEEeecCC-CCeEEEEeCCCeEEEEECCCCCCC------CCCccccc--cceEEEEEeecccCccceecc
Q 022870 58 VHSAAHGIVSVATGPSIG-LNKVISQGRDGTVKCWDIENGGLS------SNPSLTIK--TNSYHFCKLSLVKEPYANAKQ 128 (291)
Q Consensus 58 ~~~~~~~v~~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 128 (291)
.|.. +|.+++|+| + +.+|++++.||.|++||+.+.... ..+...+. ........+.+..........
T Consensus 126 ~h~~--~v~~l~~~p--~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 126 NHEG--EVNRARYMP--QNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EESS--CCSEEEEET--TEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred cCCC--cEEEEEECC--CCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 5664 499999999 6 578999999999999999862110 11122222 222333334433332344455
Q ss_pred CCCCceeeecccCccc------cccCCCCCC----cccCCCCCcEEEEecCCcCeEEEEeCCCc---ceeeEecccccCC
Q 022870 129 ANEPKDCYEREVGETV------DTDSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTA---ERCTRLHQNSCGG 195 (291)
Q Consensus 129 ~~~~~~~~~~~~~~~~------~~~~~~~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~---~~~~~~~~~~~~~ 195 (291)
..+...+|++...... ...+.+|.. ++|+|++..+++ +++.|+.|++||++++ +.+..+.
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~-s~~~dg~i~i~d~~~~~~~~~~~~~~------ 274 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFG-SVADDQKLMIWDTRNNNTSKPSHTVD------ 274 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEE-EEETTSEEEEEETTCSCSSSCSEEEE------
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEE-EEeCCCeEEEEECCCCCCCcceeEee------
Confidence 5677888888763221 233445655 899997777776 4556999999999987 4555555
Q ss_pred CCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCC-eeEEecCCC
Q 022870 196 SPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQ 274 (291)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~dg 274 (291)
.| ...+.++. |+|+ +..++++|+.||.|++||+++...++..+..|...|++++|+|++. +|++++.||
T Consensus 275 --~~----~~~v~~i~-~~p~---~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 275 --AH----TAEVNCLS-FNPY---SEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 344 (430)
T ss_dssp --CC----SSCEEEEE-ECSS---CTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred --cC----CCCeEEEE-eCCC---CCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC
Confidence 44 34577787 9998 3337999999999999999986778899999999999999999985 689999999
Q ss_pred eEEEEEcCC
Q 022870 275 KIVLYNLDH 283 (291)
Q Consensus 275 ~i~vw~~~~ 283 (291)
.|++||++.
T Consensus 345 ~i~iwd~~~ 353 (430)
T 2xyi_A 345 RLHVWDLSK 353 (430)
T ss_dssp CCEEEEGGG
T ss_pred cEEEEeCCC
Confidence 999999987
No 122
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=2.4e-25 Score=181.02 Aligned_cols=249 Identities=13% Similarity=0.094 Sum_probs=149.4
Q ss_pred cCCccceeEEEEcC-CCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecC-CCCeEEEEeCCCeEEEEE
Q 022870 15 RGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI-GLNKVISQGRDGTVKCWD 92 (291)
Q Consensus 15 ~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~s~~~dg~i~iwd 92 (291)
.+|...|++++|+| ++.+|++++.||.|++||+.+++....+. +. ..+.++.++|.. ++.++++++.||.|++||
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 172 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FE--ETVYSHHMSPVSTKHCLVAVGTRGPKVQLCD 172 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CS--SCEEEEEECSSCSSCCEEEEEESSSSEEEEE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CC--CceeeeEeecCCCCCcEEEEEcCCCeEEEEe
Confidence 36999999999999 78899999999999999999999888776 44 449999999831 234899999999999999
Q ss_pred CCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccC---------------CCCCC----
Q 022870 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDS---------------LCDSK---- 153 (291)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~---- 153 (291)
+++++... .+..+........+.+............+...+|+++........+ ..|..
T Consensus 173 ~~~~~~~~--~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 250 (408)
T 4a11_B 173 LKSGSCSH--ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNG 250 (408)
T ss_dssp SSSSCCCE--EECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEE
T ss_pred CCCcceee--eecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeE
Confidence 99876543 2333344455555555444334455566778888886554222211 33444
Q ss_pred cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEeccccc---------------------------------------C
Q 022870 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSC---------------------------------------G 194 (291)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~---------------------------------------~ 194 (291)
++|+|++..++ +++.|+.|++||+++++....+..... .
T Consensus 251 ~~~~~~~~~l~--~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~ 328 (408)
T 4a11_B 251 LCFTSDGLHLL--TVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQIT 328 (408)
T ss_dssp EEECTTSSEEE--EEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEE
T ss_pred EEEcCCCCEEE--EecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCccee
Confidence 89999987655 566689999999987654332211000 0
Q ss_pred CCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeec-CCCeeEEecCC
Q 022870 195 GSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDE-SCNGGISGGAD 273 (291)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~d 273 (291)
...+| ...+.++. |+|+ ++ +|++|+.||.|++||+++ .+++.....+... ..+++ ....+.+.+.|
T Consensus 329 ~~~~~----~~~v~~~~-~s~~---~~-~l~s~~~dg~i~iw~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 395 (408)
T 4a11_B 329 MLKGH----YKTVDCCV-FQSN---FQ-ELYSGSRDCNILAWVPSL-YEPVPDDDETTTK---SQLNPAFEDAWSSSDEE 395 (408)
T ss_dssp EECCC----SSCEEEEE-EETT---TT-EEEEEETTSCEEEEEECC----------------------------------
T ss_pred eeccC----CCeEEEEE-EcCC---CC-EEEEECCCCeEEEEeCCC-CCccCCCCceEec---cccccccceeecccCcc
Confidence 00023 45677787 9998 44 899999999999999998 6666554433222 22322 33345677789
Q ss_pred CeEEEEEcCC
Q 022870 274 QKIVLYNLDH 283 (291)
Q Consensus 274 g~i~vw~~~~ 283 (291)
+.+++|+...
T Consensus 396 ~~~~~W~~~~ 405 (408)
T 4a11_B 396 GGTSAWSHPQ 405 (408)
T ss_dssp ----------
T ss_pred CceeecCCcc
Confidence 9999998764
No 123
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1e-25 Score=181.43 Aligned_cols=215 Identities=16% Similarity=0.169 Sum_probs=154.5
Q ss_pred CceEEecCCccceeEEEEcCC--CCEEEEecCCCeEEEEeCCCCe--EEEEEeeecCCcceEEEEEeecCC--CCeEEEE
Q 022870 9 DPVAVLRGHRASVTDVCFHQT--KPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIG--LNKVISQ 82 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~s~ 82 (291)
+++..+.+|..+|++++|+++ +.+|++|+.||.|++||+.+++ .+..+..|.. +|.+++|+| + +.+|+++
T Consensus 46 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~--~v~~~~~~~--~~~~~~l~~~ 121 (379)
T 3jrp_A 46 KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSA--SVNSVQWAP--HEYGPLLLVA 121 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS--CEEEEEECC--GGGCSEEEEE
T ss_pred eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCc--ceEEEEeCC--CCCCCEEEEe
Confidence 456788999999999999976 8999999999999999999887 6666777774 499999999 7 8999999
Q ss_pred eCCCeEEEEECCCCCCCCCCccccccceEEEEEeecc------------cCccceeccCCCCceeeecccCcc---cccc
Q 022870 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV------------KEPYANAKQANEPKDCYEREVGET---VDTD 147 (291)
Q Consensus 83 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 147 (291)
+.|+.|++||++............+........+.+. ...........+...+|++..... ....
T Consensus 122 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 201 (379)
T 3jrp_A 122 SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST 201 (379)
T ss_dssp ETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred cCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEE
Confidence 9999999999998754332122233334444444442 123334445566788888765542 3344
Q ss_pred CCCCCC----cccCCCC--CcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCc
Q 022870 148 SLCDSK----DDVPAEG--PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGF 221 (291)
Q Consensus 148 ~~~~~~----~~~~~~~--~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~ 221 (291)
+.+|.. ++|+|++ ..+++ +++.||.|++||+++++....... .........+.++. |+|+ |+
T Consensus 202 ~~~h~~~v~~~~~sp~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~-------~~~~~~~~~v~~~~-~s~~---g~ 269 (379)
T 3jrp_A 202 LEGHSDWVRDVAWSPTVLLRSYLA-SVSQDRTCIIWTQDNEQGPWKKTL-------LKEEKFPDVLWRAS-WSLS---GN 269 (379)
T ss_dssp ECCCSSCEEEEEECCCCSSSEEEE-EEETTSCEEEEEESSTTSCCEEEE-------SSSSCCSSCEEEEE-ECSS---SC
T ss_pred EecccCcEeEEEECCCCCCCCeEE-EEeCCCEEEEEeCCCCCccceeee-------eccccCCCcEEEEE-EcCC---CC
Confidence 556655 8999994 34454 566799999999998752211111 11111345678887 9998 44
Q ss_pred eEEEeecCCCcEEEEEccC
Q 022870 222 VNVLAGYEDGSILVWDIRN 240 (291)
Q Consensus 222 ~~l~~g~~dg~i~vwd~~~ 240 (291)
+|++++.||.|++||++.
T Consensus 270 -~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 270 -VLALSGGDNKVTLWKENL 287 (379)
T ss_dssp -CEEEEESSSSEEEEEEEE
T ss_pred -EEEEecCCCcEEEEeCCC
Confidence 899999999999999984
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=1.3e-26 Score=178.93 Aligned_cols=171 Identities=14% Similarity=0.095 Sum_probs=120.9
Q ss_pred CCceEEecCCccceeEEEEcC---CCCEEEEecCCCeEEEEeCCCCeEEEEEeeecC-CcceEEEEEeecCCCCeE----
Q 022870 8 PDPVAVLRGHRASVTDVCFHQ---TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVSVATGPSIGLNKV---- 79 (291)
Q Consensus 8 ~~~~~~l~~h~~~v~~l~~~~---~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l---- 79 (291)
++.+..+.+|...++.++|++ ++.+|++|+.|++|+|||++++++++++..|.. ...+.+++|+| +|.++
T Consensus 168 G~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp--dG~~lvs~s 245 (356)
T 2w18_A 168 GGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE--MGLLFIVLS 245 (356)
T ss_dssp SCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE--TTEEEEEEC
T ss_pred CceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC--CCCEEEEec
Confidence 456777788888888888888 678999999999999999999999999986542 23588889999 88776
Q ss_pred --------EEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCC
Q 022870 80 --------ISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCD 151 (291)
Q Consensus 80 --------~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (291)
++|+.|++|++||..+++... .+. +.. + .+|
T Consensus 246 ~~~~~w~laSGs~D~tIklWd~~tgk~l~--v~~----------~~~---p--------------------------~Gh 284 (356)
T 2w18_A 246 HPCAKESESLRSPVFQLIVINPKTTLSVG--VML----------YCL---P--------------------------PGQ 284 (356)
T ss_dssp ------------CCEEEEEEETTTTEEEE--EEE----------ECC---C--------------------------TTC
T ss_pred cCCCcceeeccCCCcEEEEEECCCCEEEE--EEE----------eec---c--------------------------CCC
Confidence 568889999999998876432 000 000 0 000
Q ss_pred CC--cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecC
Q 022870 152 SK--DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 229 (291)
Q Consensus 152 ~~--~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~ 229 (291)
.. +..+.++. ++ ++|+.|++|+|||+++++++.+++ +|... .+..++ |+|+ |+ +|++|+.
T Consensus 285 ~~~~lsg~~sg~-~l-ASgS~DgTIkIWDl~tGk~l~tL~--------gH~~~---vvs~va-fSPD---G~-~LaSGS~ 346 (356)
T 2w18_A 285 AGRFLEGDVKDH-CA-AAILTSGTIAIWDLLLGQCTALLP--------PVSDQ---HWSFVK-WSGT---DS-HLLAGQK 346 (356)
T ss_dssp CCCEEEEEEETT-EE-EEEETTSCEEEEETTTCSEEEEEC--------CC--C---CCCEEE-ECSS---SS-EEEEECT
T ss_pred cceeEccccCCC-EE-EEEcCCCcEEEEECCCCcEEEEec--------CCCCC---eEEEEE-ECCC---CC-EEEEEEC
Confidence 00 00111222 33 378889999999999999999998 66432 223355 9998 44 9999999
Q ss_pred CCcEEEEEcc
Q 022870 230 DGSILVWDIR 239 (291)
Q Consensus 230 dg~i~vwd~~ 239 (291)
|++|+|||+.
T Consensus 347 D~TIklWd~~ 356 (356)
T 2w18_A 347 DGNIFVYHYS 356 (356)
T ss_dssp TSCEEEEEEC
T ss_pred CCcEEEecCC
Confidence 9999999963
No 125
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.7e-24 Score=173.65 Aligned_cols=223 Identities=14% Similarity=0.142 Sum_probs=157.8
Q ss_pred EEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCC
Q 022870 52 TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANE 131 (291)
Q Consensus 52 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (291)
....+.+|... |++++|+| ++++|++++.||.|++||+.+++... .+..+........+.+... ........+
T Consensus 24 ~~~~l~~h~~~--v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~-~l~s~~~dg 96 (369)
T 3zwl_B 24 KAIKLTGHERP--LTQVKYNK--EGDLLFSCSKDSSASVWYSLNGERLG--TLDGHTGTIWSIDVDCFTK-YCVTGSADY 96 (369)
T ss_dssp EEEEEECCSSC--EEEEEECT--TSCEEEEEESSSCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSS-EEEEEETTT
T ss_pred ccEEEEEeece--EEEEEEcC--CCCEEEEEeCCCEEEEEeCCCchhhh--hhhhcCCcEEEEEEcCCCC-EEEEEeCCC
Confidence 44556777754 99999999 99999999999999999999876543 2233344444444544322 223334456
Q ss_pred CceeeecccCccccccCCCCCC--cccCCCCCcEEEEecCCc-----CeEEEEeCCCcceeeEeccccc---CCCCCCCC
Q 022870 132 PKDCYEREVGETVDTDSLCDSK--DDVPAEGPKYMAVAGEQL-----SEVEIWDLNTAERCTRLHQNSC---GGSPNFSS 201 (291)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~d-----~~i~~wd~~~~~~~~~~~~~~~---~~~~~~~~ 201 (291)
...+|++..............- ++|+|++..++ +++.+ +.|++||++.......+..... .....|..
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~--~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFL--AILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG 174 (369)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEE--EEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred eEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEE--EecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence 6788888776644433311111 89999998666 34446 9999999987653322221000 00002211
Q ss_pred CcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEc
Q 022870 202 KGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNL 281 (291)
Q Consensus 202 ~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~ 281 (291)
...+.++. |+|+ ++ +|++++.||.|++||+++....+..+..|...|.+++|+|++.+|++++.||.|++||+
T Consensus 175 --~~~~~~~~-~~~~---~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 247 (369)
T 3zwl_B 175 --LDAATVAG-WSTK---GK-YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDV 247 (369)
T ss_dssp --CCCEEEEE-ECGG---GC-EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred --ccceeEEE-EcCC---CC-EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEEC
Confidence 12567776 9998 44 89999999999999999756788889999999999999999999999999999999999
Q ss_pred CCCceeeee
Q 022870 282 DHSTVSHCV 290 (291)
Q Consensus 282 ~~~~~~~~~ 290 (291)
++++.+..+
T Consensus 248 ~~~~~~~~~ 256 (369)
T 3zwl_B 248 STLQVLKKY 256 (369)
T ss_dssp TTCCEEEEE
T ss_pred CCCceeeee
Confidence 998877653
No 126
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=8e-25 Score=191.13 Aligned_cols=215 Identities=16% Similarity=0.170 Sum_probs=155.6
Q ss_pred CceEEecCCccceeEEEEcCC--CCEEEEecCCCeEEEEeCCCCe--EEEEEeeecCCcceEEEEEeecCC--CCeEEEE
Q 022870 9 DPVAVLRGHRASVTDVCFHQT--KPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIG--LNKVISQ 82 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~s~ 82 (291)
+++.++.+|.++|++++|+|+ +++|++|+.||.|++||+.+++ .+..+..|... |.+++|+| + ++++++|
T Consensus 44 ~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~--V~~v~~sp--~~~~~~l~sg 119 (753)
T 3jro_A 44 KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSAS--VNSVQWAP--HEYGPLLLVA 119 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC--EEEEEECC--GGGCSEEEEE
T ss_pred ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCC--eEEEEECC--CCCCCEEEEE
Confidence 457788999999999999987 9999999999999999999887 66667777744 99999999 7 8999999
Q ss_pred eCCCeEEEEECCCCCCCCCCccccccceEEEEEeecc------------cCccceeccCCCCceeeecccCc---ccccc
Q 022870 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLV------------KEPYANAKQANEPKDCYEREVGE---TVDTD 147 (291)
Q Consensus 83 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 147 (291)
+.||.|++||+++...........+........+.+. ...........+...+|+++... .....
T Consensus 120 s~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~ 199 (753)
T 3jro_A 120 SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST 199 (753)
T ss_dssp ETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred eCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeee
Confidence 9999999999998754332222233334444444442 12334444556677888887653 33344
Q ss_pred CCCCCC----cccCCCC--CcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCc
Q 022870 148 SLCDSK----DDVPAEG--PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGF 221 (291)
Q Consensus 148 ~~~~~~----~~~~~~~--~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~ 221 (291)
+.+|.. ++|+|++ ..+++ +|+.||.|++||+++++....... .........+.++. |+|+ |+
T Consensus 200 ~~~h~~~V~~l~~sp~~~~~~~l~-s~s~Dg~I~iwd~~~~~~~~~~~~-------~~~~~~~~~v~~l~-~spd---g~ 267 (753)
T 3jro_A 200 LEGHSDWVRDVAWSPTVLLRSYLA-SVSQDRTCIIWTQDNEQGPWKKTL-------LKEEKFPDVLWRAS-WSLS---GN 267 (753)
T ss_dssp ECCCSSCEEEEEECCCCSSSEEEE-EEESSSCEEEEEESSSSSCCBCCB-------SSSSCCSSCCCCEE-ECTT---TC
T ss_pred ecCCCCcEEEEEeccCCCCCCEEE-EEecCCEEEEecCCCCCCcceeEE-------eccCCCCCceEEEE-EcCC---CC
Confidence 556665 8999993 34444 566799999999998753211111 11112345677787 9998 44
Q ss_pred eEEEeecCCCcEEEEEccC
Q 022870 222 VNVLAGYEDGSILVWDIRN 240 (291)
Q Consensus 222 ~~l~~g~~dg~i~vwd~~~ 240 (291)
+|++|+.||.|++||++.
T Consensus 268 -~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 268 -VLALSGGDNKVTLWKENL 285 (753)
T ss_dssp -CEEEECSSSCEECCBCCS
T ss_pred -EEEEEcCCCEEEEEecCC
Confidence 899999999999999985
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=2.7e-23 Score=169.39 Aligned_cols=207 Identities=11% Similarity=0.012 Sum_probs=151.5
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEecCCC---eEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEE-EEeC
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGG---ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGR 84 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~ 84 (291)
.....+.+|...|.+++|+|+|++|++++.|+ .|++||+.+++.. .+..+.. .+.+++|+| +|++|+ +++.
T Consensus 169 ~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~--~~~~~~~sp--dg~~la~~~~~ 243 (415)
T 2hqs_A 169 YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPR--HNGAPAFSP--DGSKLAFALSK 243 (415)
T ss_dssp CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSS--CEEEEEECT--TSSEEEEEECT
T ss_pred CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCC--cccCEEEcC--CCCEEEEEEec
Confidence 45677888999999999999999999998875 9999999988775 4555654 499999999 999887 6666
Q ss_pred CCe--EEEEECCCCCCCCCCccccccce-EEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCC
Q 022870 85 DGT--VKCWDIENGGLSSNPSLTIKTNS-YHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGP 161 (291)
Q Consensus 85 dg~--i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
|+. |++||+.+++.. .+.... .... ++|+|+|+
T Consensus 244 ~g~~~i~~~d~~~~~~~-----~l~~~~~~~~~---------------------------------------~~~spdg~ 279 (415)
T 2hqs_A 244 TGSLNLYVMDLASGQIR-----QVTDGRSNNTE---------------------------------------PTWFPDSQ 279 (415)
T ss_dssp TSSCEEEEEETTTCCEE-----ECCCCSSCEEE---------------------------------------EEECTTSS
T ss_pred CCCceEEEEECCCCCEE-----eCcCCCCcccc---------------------------------------eEECCCCC
Confidence 654 999999876531 111111 0001 55999998
Q ss_pred cEEEEecCCcC--eEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCC---CcEEEE
Q 022870 162 KYMAVAGEQLS--EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED---GSILVW 236 (291)
Q Consensus 162 ~~~~~~g~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d---g~i~vw 236 (291)
.++++ +..++ .|++||+.+++.. .+. .+ ...+..+. |+|+ |+ +|++++.+ +.|++|
T Consensus 280 ~l~~~-s~~~g~~~i~~~d~~~~~~~-~l~--------~~----~~~~~~~~-~spd---G~-~l~~~~~~~g~~~i~~~ 340 (415)
T 2hqs_A 280 NLAFT-SDQAGRPQVYKVNINGGAPQ-RIT--------WE----GSQNQDAD-VSSD---GK-FMVMVSSNGGQQHIAKQ 340 (415)
T ss_dssp EEEEE-ECTTSSCEEEEEETTSSCCE-ECC--------CS----SSEEEEEE-ECTT---SS-EEEEEEECSSCEEEEEE
T ss_pred EEEEE-ECCCCCcEEEEEECCCCCEE-EEe--------cC----CCcccCeE-ECCC---CC-EEEEEECcCCceEEEEE
Confidence 77654 33344 6888899887643 333 22 23456676 9998 55 67666653 589999
Q ss_pred EccCCCCceeeccccccceeEEEeecCCCeeEEecCCC---eEEEEEcCCCce
Q 022870 237 DIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ---KIVLYNLDHSTV 286 (291)
Q Consensus 237 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg---~i~vw~~~~~~~ 286 (291)
|+.+ ++. ..+..|. .+.+++|+|+|++|++++.|+ .|++||++.+..
T Consensus 341 d~~~-~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~ 390 (415)
T 2hqs_A 341 DLAT-GGV-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK 390 (415)
T ss_dssp ETTT-CCE-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCE
T ss_pred ECCC-CCE-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcE
Confidence 9997 554 4565554 899999999999999888877 899999986543
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=2.6e-23 Score=174.57 Aligned_cols=261 Identities=11% Similarity=0.013 Sum_probs=177.3
Q ss_pred CCCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeC--CCCeEEEEEeeecCCcceEEEEEeecC--CCCeEEEE
Q 022870 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDT--VQHRTVSSSWVHSAAHGIVSVATGPSI--GLNKVISQ 82 (291)
Q Consensus 7 ~~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~--~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~l~s~ 82 (291)
..+++.++..+.. +.+++|+|+|++|++++.|++|++||+ .+++++.++..+ ..+..++|+|.. +|++++++
T Consensus 168 t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g---~~p~~va~sp~~~~dg~~l~v~ 243 (543)
T 1nir_A 168 SKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG---IEARSVESSKFKGYEDRYTIAG 243 (543)
T ss_dssp TCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC---SEEEEEEECCSTTCTTTEEEEE
T ss_pred CceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC---CCcceEEeCCCcCCCCCEEEEE
Confidence 3466777873333 899999999999999999999999999 888888888743 347999999711 46788887
Q ss_pred e-CCCeEEEEECCCCCCCCCCcccccc----------c-eEEEEEeecccCccceeccCCCCceeeecccCcccc-ccCC
Q 022870 83 G-RDGTVKCWDIENGGLSSNPSLTIKT----------N-SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVD-TDSL 149 (291)
Q Consensus 83 ~-~dg~i~iwd~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 149 (291)
+ .+++|.+||..+.+... .+.... . ......++.............+.+..++........ ....
T Consensus 244 ~~~~~~v~v~D~~t~~~~~--~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~ 321 (543)
T 1nir_A 244 AYWPPQFAIMDGETLEPKQ--IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG 321 (543)
T ss_dssp EEESSEEEEEETTTCCEEE--EEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE
T ss_pred EccCCeEEEEeccccccce--eecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec
Confidence 7 48999999998876543 111110 0 112222222222222223334455556655433221 1111
Q ss_pred -C-CCC-cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEe
Q 022870 150 -C-DSK-DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (291)
Q Consensus 150 -~-~~~-~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~ 226 (291)
+ ... ++|+|+|+++++ ++..+++|.+||+.+++++..+.... ..|.. .+. .+ ++|++ |+ ++++
T Consensus 322 ~~~~~~~~~~spdg~~l~v-a~~~~~~v~v~D~~tg~l~~~i~~g~----~ph~g--~g~--~~--~~p~~--g~-~~~s 387 (543)
T 1nir_A 322 AAPFLHDGGWDSSHRYFMT-AANNSNKVAVIDSKDRRLSALVDVGK----TPHPG--RGA--NF--VHPKY--GP-VWST 387 (543)
T ss_dssp CCSSCCCEEECTTSCEEEE-EEGGGTEEEEEETTTTEEEEEEECSS----SBCCT--TCE--EE--EETTT--EE-EEEE
T ss_pred cCcCccCceECCCCCEEEE-EecCCCeEEEEECCCCeEEEeeccCC----CCCCC--CCc--cc--CCCCC--cc-EEEe
Confidence 1 111 899999987765 45557899999999999888776210 01211 111 11 45652 33 6777
Q ss_pred ec-CCCcEEEEEccCC------CCceeeccccccceeEEEeecCCCeeEEec-------CCCeEEEEEcCCCcee
Q 022870 227 GY-EDGSILVWDIRNP------GIPLTAMKVHLEPVLCLSIDESCNGGISGG-------ADQKIVLYNLDHSTVS 287 (291)
Q Consensus 227 g~-~dg~i~vwd~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-------~dg~i~vw~~~~~~~~ 287 (291)
+. .|++|.+||+.+. .+.++.+.+|...+..++++|++++|++++ .+++|.|||+++++..
T Consensus 388 ~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 388 SHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp EBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred ccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 75 6899999999862 567888999988899999999999999987 2779999999998876
No 129
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=3.1e-22 Score=158.43 Aligned_cols=253 Identities=7% Similarity=0.027 Sum_probs=166.2
Q ss_pred CCCceEEecCCccceeEEEEcCCCCEEEEecC-CCeEEEEeCCCCeE-EEEEeeecCCcceEEEEEeecCCCCeEEEEeC
Q 022870 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTT-GGELRIWDTVQHRT-VSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (291)
Q Consensus 7 ~~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~-dg~v~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (291)
..+.+..+..+...+ +++|+|+|+++++++. ++.|.+||+.+++. ...+..+..+ ..+++|+| ++++++++..
T Consensus 29 ~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~s~--dg~~l~~~~~ 103 (331)
T 3u4y_A 29 TLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSS--MADVDITP--DDQFAVTVTG 103 (331)
T ss_dssp TCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSC--CCCEEECT--TSSEEEECCC
T ss_pred ccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCC--ccceEECC--CCCEEEEecC
Confidence 345566666666677 9999999986665554 89999999998887 6666666533 55599999 9999986555
Q ss_pred CC---eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCC-ceeeecccCccc----cccCCCCCC---
Q 022870 85 DG---TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEP-KDCYEREVGETV----DTDSLCDSK--- 153 (291)
Q Consensus 85 dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~--- 153 (291)
++ .|.+||+.+++... ..... .......+++.............. ...|++...... .........
T Consensus 104 ~~~~~~i~v~d~~~~~~~~--~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~ 180 (331)
T 3u4y_A 104 LNHPFNMQSYSFLKNKFIS--TIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFN 180 (331)
T ss_dssp SSSSCEEEEEETTTTEEEE--EEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEE
T ss_pred CCCcccEEEEECCCCCeEE--EEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccc
Confidence 53 89999998876533 12221 223444555554433333334345 666776543221 111111112
Q ss_pred cccCCCCCcEEEEecCCcCeEEEEeCCCcce---eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCC
Q 022870 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAER---CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 230 (291)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d 230 (291)
++|+|+|+.+++ ++..++.|++||+.+++. +..+.. . ..+..+. |+|+ |+.++++...+
T Consensus 181 ~~~spdg~~l~v-~~~~~~~v~v~d~~~~~~~~~~~~~~~--------~-----~~~~~~~-~spd---g~~l~v~~~~~ 242 (331)
T 3u4y_A 181 ITFTPDGNFAFV-ANLIGNSIGILETQNPENITLLNAVGT--------N-----NLPGTIV-VSRD---GSTVYVLTEST 242 (331)
T ss_dssp EEECTTSSEEEE-EETTTTEEEEEECSSTTSCEEEEEEEC--------S-----SCCCCEE-ECTT---SSEEEEECSSE
T ss_pred eEECCCCCEEEE-EeCCCCeEEEEECCCCcccceeeeccC--------C-----CCCceEE-ECCC---CCEEEEEEcCC
Confidence 899999987665 455689999999999887 666652 1 2345565 9998 55244455568
Q ss_pred CcEEEEEccCCCCc--eeecccc----ccc---eeEEEeecCCCeeEE-ecCCCeEEEEEcCCCce
Q 022870 231 GSILVWDIRNPGIP--LTAMKVH----LEP---VLCLSIDESCNGGIS-GGADQKIVLYNLDHSTV 286 (291)
Q Consensus 231 g~i~vwd~~~~~~~--~~~~~~h----~~~---v~~~~~~~~~~~l~s-~s~dg~i~vw~~~~~~~ 286 (291)
+.|.+||+.+ ++. +..+..+ ..+ ...++|+|++++|+. +..++.|.+||+.....
T Consensus 243 ~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 243 VDVFNFNQLS-GTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp EEEEEEETTT-TEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred CEEEEEECCC-CceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 8999999987 554 2222211 222 356899999998754 45567999999987664
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=3.6e-22 Score=155.12 Aligned_cols=209 Identities=13% Similarity=0.120 Sum_probs=148.8
Q ss_pred eEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCC-CeEEEEEeeecCCcceEEEEEeecCCCCeEEEEe--CCCe
Q 022870 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG--RDGT 87 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~--~dg~ 87 (291)
...+..|...|.+++|+|++++|++++ ++.|++||+.+ ++.......+.. ..+.+++|+| ++++|++++ .++.
T Consensus 34 ~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~sp--dg~~l~~~~~~~~~~ 109 (297)
T 2ojh_A 34 MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFAT-ICNNDHGISP--DGALYAISDKVEFGK 109 (297)
T ss_dssp EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCC-CBCSCCEECT--TSSEEEEEECTTTSS
T ss_pred eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccccc-ccccceEECC--CCCEEEEEEeCCCCc
Confidence 445667899999999999999999986 78999999998 777665544421 4589999999 999999988 3345
Q ss_pred EEEEEC--CCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEE
Q 022870 88 VKCWDI--ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (291)
Q Consensus 88 i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
..+|.+ .+++.. .+........ ++|+|+++.+++
T Consensus 110 ~~l~~~~~~~~~~~-----~~~~~~~~~~---------------------------------------~~~spdg~~l~~ 145 (297)
T 2ojh_A 110 SAIYLLPSTGGTPR-----LMTKNLPSYW---------------------------------------HGWSPDGKSFTY 145 (297)
T ss_dssp CEEEEEETTCCCCE-----ECCSSSSEEE---------------------------------------EEECTTSSEEEE
T ss_pred ceEEEEECCCCceE-----EeecCCCccc---------------------------------------eEECCCCCEEEE
Confidence 555555 433211 1111111111 459999987765
Q ss_pred EecCCcCeEEEEeCC--CcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEe-ecCCCcEEEEEccCCC
Q 022870 166 VAGEQLSEVEIWDLN--TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA-GYEDGSILVWDIRNPG 242 (291)
Q Consensus 166 ~~g~~d~~i~~wd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~-g~~dg~i~vwd~~~~~ 242 (291)
++..++.+++|+++ +++ ...+. .+ ...+..+. |+|+ |+ +|+. +..++.+++|++...+
T Consensus 146 -~~~~~~~~~l~~~~~~~~~-~~~~~--------~~----~~~~~~~~-~s~d---g~-~l~~~~~~~~~~~i~~~~~~~ 206 (297)
T 2ojh_A 146 -CGIRDQVFDIYSMDIDSGV-ETRLT--------HG----EGRNDGPD-YSPD---GR-WIYFNSSRTGQMQIWRVRVDG 206 (297)
T ss_dssp -EEEETTEEEEEEEETTTCC-EEECC--------CS----SSCEEEEE-ECTT---SS-EEEEEECTTSSCEEEEEETTS
T ss_pred -EECCCCceEEEEEECCCCc-ceEcc--------cC----CCccccce-ECCC---CC-EEEEEecCCCCccEEEECCCC
Confidence 44457889999864 333 33333 22 23456676 9998 54 5554 4568999999987436
Q ss_pred CceeeccccccceeEEEeecCCCeeEEecCC-----------CeEEEEEcCCCce
Q 022870 243 IPLTAMKVHLEPVLCLSIDESCNGGISGGAD-----------QKIVLYNLDHSTV 286 (291)
Q Consensus 243 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d-----------g~i~vw~~~~~~~ 286 (291)
..+..+..|...+..++|+|++++|++++.+ +.|++||+++++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 207 SSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp SCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred CCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 6777888888899999999999999888766 5799999998765
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=5.7e-22 Score=166.46 Aligned_cols=209 Identities=12% Similarity=0.013 Sum_probs=153.9
Q ss_pred EEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEEC--CCCCCCCCC
Q 022870 25 CFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI--ENGGLSSNP 102 (291)
Q Consensus 25 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~ 102 (291)
+|+|++.++++++.|++|.+||..+++++.++..+. .+..++|+| ++++|++++.|++|.+||+ .+++...
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~---~~~~v~~sp--dg~~l~v~~~d~~V~v~D~~~~t~~~~~-- 216 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY---AVHISRMSA--SGRYLLVIGRDARIDMIDLWAKEPTKVA-- 216 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECST---TEEEEEECT--TSCEEEEEETTSEEEEEETTSSSCEEEE--
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCc---ccceEEECC--CCCEEEEECCCCeEEEEECcCCCCcEEE--
Confidence 488999899999999999999999999999887543 289999999 9999999999999999999 5554322
Q ss_pred ccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCC----CCCcEEEEecCCcCeEEEEe
Q 022870 103 SLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPA----EGPKYMAVAGEQLSEVEIWD 178 (291)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~d~~i~~wd 178 (291)
++........ ++|+| +|+.+++ ++..++.|.+||
T Consensus 217 --~i~~g~~p~~---------------------------------------va~sp~~~~dg~~l~v-~~~~~~~v~v~D 254 (543)
T 1nir_A 217 --EIKIGIEARS---------------------------------------VESSKFKGYEDRYTIA-GAYWPPQFAIMD 254 (543)
T ss_dssp --EEECCSEEEE---------------------------------------EEECCSTTCTTTEEEE-EEEESSEEEEEE
T ss_pred --EEecCCCcce---------------------------------------EEeCCCcCCCCCEEEE-EEccCCeEEEEe
Confidence 2221111111 66999 9987664 454589999999
Q ss_pred CCCcceeeEecccccCCC--CCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCcee-eccccccce
Q 022870 179 LNTAERCTRLHQNSCGGS--PNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT-AMKVHLEPV 255 (291)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~-~~~~h~~~v 255 (291)
..+++++..+........ .-| ....+.++. ++|+ +..++++...++.|.+||+.+ .+.+. ....+...+
T Consensus 255 ~~t~~~~~~i~~~g~~~~~~~~~---~~~~v~~i~-~s~~---~~~~~vs~~~~g~i~vvd~~~-~~~l~~~~i~~~~~~ 326 (543)
T 1nir_A 255 GETLEPKQIVSTRGMTVDTQTYH---PEPRVAAII-ASHE---HPEFIVNVKETGKVLLVNYKD-IDNLTVTSIGAAPFL 326 (543)
T ss_dssp TTTCCEEEEEECCEECSSSCCEE---SCCCEEEEE-ECSS---SSEEEEEETTTTEEEEEECTT-SSSCEEEEEECCSSC
T ss_pred ccccccceeecccCcccCccccc---cCCceEEEE-ECCC---CCEEEEEECCCCeEEEEEecC-CCcceeEEeccCcCc
Confidence 999998888762100000 001 112456676 9987 333888899999999999987 44333 122356778
Q ss_pred eEEEeecCCCeeE-EecCCCeEEEEEcCCCceeeee
Q 022870 256 LCLSIDESCNGGI-SGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 256 ~~~~~~~~~~~l~-s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
.+++|+|++++|+ ++..+++|.+||+.+++++.++
T Consensus 327 ~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i 362 (543)
T 1nir_A 327 HDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALV 362 (543)
T ss_dssp CCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred cCceECCCCCEEEEEecCCCeEEEEECCCCeEEEee
Confidence 8999999999765 4556899999999999987654
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=1.1e-20 Score=150.75 Aligned_cols=250 Identities=11% Similarity=0.075 Sum_probs=169.5
Q ss_pred CccceeEEEEcCCCCEEEEecC-------CCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEE-EEeCCCeE
Q 022870 17 HRASVTDVCFHQTKPILFAGTT-------GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTV 88 (291)
Q Consensus 17 h~~~v~~l~~~~~~~~l~s~~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i 88 (291)
....+..++|+|+++++++++. ++.|.+||..+++.+..+.... .+..++|+| ++++++ +...++.|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~--dg~~l~v~~~~~~~v 113 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL---KPFGATINN--TTQTLWFGNTVNSAV 113 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS---CCCSEEEET--TTTEEEEEETTTTEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC---CcceEEECC--CCCEEEEEecCCCEE
Confidence 4567889999999998887764 5689999999999888887542 378899999 888555 55668999
Q ss_pred EEEECCCCCCCCCCccccccc---------eEEEEEeecccCccceec-cCCCCceeeecccCccccccC-CCCCC--cc
Q 022870 89 KCWDIENGGLSSNPSLTIKTN---------SYHFCKLSLVKEPYANAK-QANEPKDCYEREVGETVDTDS-LCDSK--DD 155 (291)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~ 155 (291)
.+||..+++... ....... ......+++......... ........++........... .+... ++
T Consensus 114 ~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (353)
T 3vgz_A 114 TAIDAKTGEVKG--RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLA 191 (353)
T ss_dssp EEEETTTCCEEE--EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCE
T ss_pred EEEeCCCCeeEE--EEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEE
Confidence 999999886533 1122111 123344444433222222 123445666666555433322 22212 89
Q ss_pred cCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEE
Q 022870 156 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 235 (291)
Q Consensus 156 ~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~v 235 (291)
|+|+++.+++ ++.++.|.+||+.+++....+.. ...........+. |+|+ |+.++++...++.|.+
T Consensus 192 ~s~dg~~l~~--~~~~~~i~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~~-~s~d---g~~l~~~~~~~~~v~~ 257 (353)
T 3vgz_A 192 LDSEGKRLYT--TNADGELITIDTADNKILSRKKL--------LDDGKEHFFINIS-LDTA---RQRAFITDSKAAEVLV 257 (353)
T ss_dssp EETTTTEEEE--ECTTSEEEEEETTTTEEEEEEEC--------CCSSSCCCEEEEE-EETT---TTEEEEEESSSSEEEE
T ss_pred ECCCCCEEEE--EcCCCeEEEEECCCCeEEEEEEc--------CCCCCCcccceEE-ECCC---CCEEEEEeCCCCEEEE
Confidence 9999987765 33479999999999988877762 1111233456676 9998 4424455556699999
Q ss_pred EEccCCCCceeeccccccceeEEEeecCCCee-EEecCCCeEEEEEcCCCceeeee
Q 022870 236 WDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 236 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
||..+ ++.+..+.... ...++|+|+++++ ++...++.|.+||+++++.+..+
T Consensus 258 ~d~~~-~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 310 (353)
T 3vgz_A 258 VDTRN-GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTF 310 (353)
T ss_dssp EETTT-CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EECCC-CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence 99988 77777766533 3679999999965 45557999999999999887653
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=8.2e-22 Score=160.66 Aligned_cols=210 Identities=11% Similarity=0.066 Sum_probs=150.2
Q ss_pred Cce--EEecCCccceeEEEEcC--------------CCCEEEEecCC------CeEEEEeCCCCeEEEEEeeecCCcceE
Q 022870 9 DPV--AVLRGHRASVTDVCFHQ--------------TKPILFAGTTG------GELRIWDTVQHRTVSSSWVHSAAHGIV 66 (291)
Q Consensus 9 ~~~--~~l~~h~~~v~~l~~~~--------------~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~v~ 66 (291)
+.+ ..+.+|...+..+++++ .+..++.++.+ ++|++||+. +.....+..|... +.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~--v~ 182 (415)
T 2hqs_A 106 TVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQP--LM 182 (415)
T ss_dssp CEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSC--EE
T ss_pred CEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCc--ce
Confidence 444 45888998888888875 15566665554 799999987 4456677778754 99
Q ss_pred EEEEeecCCCCeEEEEeCCC---eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCcc
Q 022870 67 SVATGPSIGLNKVISQGRDG---TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGET 143 (291)
Q Consensus 67 ~~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (291)
+++|+| +|++|++++.++ .|++||+++++... +.... .. ...
T Consensus 183 ~~~~Sp--dg~~la~~s~~~~~~~i~~~d~~tg~~~~--l~~~~-~~-~~~----------------------------- 227 (415)
T 2hqs_A 183 SPAWSP--DGSKLAYVTFESGRSALVIQTLANGAVRQ--VASFP-RH-NGA----------------------------- 227 (415)
T ss_dssp EEEECT--TSSEEEEEECTTSSCEEEEEETTTCCEEE--EECCS-SC-EEE-----------------------------
T ss_pred eeEEcC--CCCEEEEEEecCCCcEEEEEECCCCcEEE--eecCC-Cc-ccC-----------------------------
Confidence 999999 999999999875 99999999875421 11111 00 001
Q ss_pred ccccCCCCCCcccCCCCCcEEEEecCCc--CeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCc
Q 022870 144 VDTDSLCDSKDDVPAEGPKYMAVAGEQL--SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGF 221 (291)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~g~~d--~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~ 221 (291)
++|+|+|+.++++ ++.+ ..|++||+++++. ..+. .| ...+.++. |+|+ |+
T Consensus 228 ----------~~~spdg~~la~~-~~~~g~~~i~~~d~~~~~~-~~l~--------~~----~~~~~~~~-~spd---g~ 279 (415)
T 2hqs_A 228 ----------PAFSPDGSKLAFA-LSKTGSLNLYVMDLASGQI-RQVT--------DG----RSNNTEPT-WFPD---SQ 279 (415)
T ss_dssp ----------EEECTTSSEEEEE-ECTTSSCEEEEEETTTCCE-EECC--------CC----SSCEEEEE-ECTT---SS
T ss_pred ----------EEEcCCCCEEEEE-EecCCCceEEEEECCCCCE-EeCc--------CC----CCcccceE-ECCC---CC
Confidence 5699999877653 4334 4599999998765 4444 33 23466676 9998 55
Q ss_pred eEEEeecC-CC--cEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCC---CeEEEEEcCCCcee
Q 022870 222 VNVLAGYE-DG--SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD---QKIVLYNLDHSTVS 287 (291)
Q Consensus 222 ~~l~~g~~-dg--~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d---g~i~vw~~~~~~~~ 287 (291)
+|++++. ++ .|++||+.+ ++ ...+..|...+.+++|+|+|++|++++.+ ..|++||+++++..
T Consensus 280 -~l~~~s~~~g~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 280 -NLAFTSDQAGRPQVYKVNING-GA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp -EEEEEECTTSSCEEEEEETTS-SC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred -EEEEEECCCCCcEEEEEECCC-CC-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE
Confidence 6766665 45 677888886 44 44556677889999999999999888764 58999999988763
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=3.9e-21 Score=152.62 Aligned_cols=253 Identities=13% Similarity=0.120 Sum_probs=153.8
Q ss_pred CCccceeEEEEcCCCCEEEEecCC-CeEEEEeCC--CCeE--EEEEeeecCCcceEEEEEeecCCCCeEEEEeC-CCeEE
Q 022870 16 GHRASVTDVCFHQTKPILFAGTTG-GELRIWDTV--QHRT--VSSSWVHSAAHGIVSVATGPSIGLNKVISQGR-DGTVK 89 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s~~~d-g~v~iwd~~--~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg~i~ 89 (291)
.|...+.+++|+|++++|++++.+ +.|++|++. +++. +..+..+ ..+..++|+| ++++|++++. ++.|.
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~--dg~~l~~~~~~~~~i~ 109 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP---GSLTHISTDH--QGQFVFVGSYNAGNVS 109 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS---SCCSEEEECT--TSSEEEEEETTTTEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC---CCCcEEEEcC--CCCEEEEEecCCCeEE
Confidence 477789999999999988888776 999999987 5543 3344433 2488999999 9887876654 88999
Q ss_pred EEECCCCCCCCCCccccccc-eEEEEEeecccCccceeccCCCCceeeeccc-Cccc-----cccCCCCCC---cccCCC
Q 022870 90 CWDIENGGLSSNPSLTIKTN-SYHFCKLSLVKEPYANAKQANEPKDCYEREV-GETV-----DTDSLCDSK---DDVPAE 159 (291)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~---~~~~~~ 159 (291)
+||+..+... ......... ......+++.................|++.. .... ......... ++|+|+
T Consensus 110 ~~d~~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd 188 (343)
T 1ri6_A 110 VTRLEDGLPV-GVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN 188 (343)
T ss_dssp EEEEETTEEE-EEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTT
T ss_pred EEECCCCccc-cccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCC
Confidence 9999522110 001111111 1112223333222222222345566677765 3221 111111112 889999
Q ss_pred CCcEEEEecCCcCeEEEEeCCC--cce--eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEE
Q 022870 160 GPKYMAVAGEQLSEVEIWDLNT--AER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 235 (291)
Q Consensus 160 ~~~~~~~~g~~d~~i~~wd~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~v 235 (291)
++.+++ ++..++.|.+||+.. ++. ...+... ..++. ....+..+. |+|+ |+.+++++..++.|++
T Consensus 189 g~~l~~-~~~~~~~i~~~~~~~~~g~~~~~~~~~~~----~~~~~--~~~~~~~i~-~s~d---g~~l~v~~~~~~~i~v 257 (343)
T 1ri6_A 189 EQYAYC-VNELNSSVDVWELKDPHGNIECVQTLDMM----PENFS--DTRWAADIH-ITPD---GRHLYACDRTASLITV 257 (343)
T ss_dssp SSEEEE-EETTTTEEEEEESSCTTSCCEEEEEEECS----CTTCC--SCCCEEEEE-ECTT---SSEEEEEETTTTEEEE
T ss_pred CCEEEE-EeCCCCEEEEEEecCCCCcEEEEeecccc----Ccccc--ccCCccceE-ECCC---CCEEEEEecCCCEEEE
Confidence 987765 455689999999954 332 2222200 00111 122445666 9998 5434456678999999
Q ss_pred EEccCC---CCceeeccccccceeEEEeecCCCeeEEec-CCCeEEEEEcC--CCce
Q 022870 236 WDIRNP---GIPLTAMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLD--HSTV 286 (291)
Q Consensus 236 wd~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~dg~i~vw~~~--~~~~ 286 (291)
||+... .+.+..+..+.. +.+++|+|++++|++++ .++.|.+|+++ ++++
T Consensus 258 ~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 258 FSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 313 (343)
T ss_dssp EEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred EEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCcee
Confidence 999831 233444544444 89999999999887777 68999999554 5543
No 135
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=3.6e-22 Score=163.36 Aligned_cols=203 Identities=14% Similarity=0.094 Sum_probs=139.7
Q ss_pred CccceeEEEEcCCCCEEEEecCCCeEEEEeCCC-----------CeEE-----EEEeeecCCcceEEEEEeecCCCCeEE
Q 022870 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-----------HRTV-----SSSWVHSAAHGIVSVATGPSIGLNKVI 80 (291)
Q Consensus 17 h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~-----------~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~l~ 80 (291)
+...++.+++++++.++++++.|+ +++|+... .... ..+ .+. .+|.+++|+| ++++|+
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~v~~l~~sp--dg~~la 108 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMK--FPIHHLALSC--DNLTLS 108 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCS--SCEEEEEECT--TSCEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCC--CcccEEEEcC--CCCEEE
Confidence 345689999999999999999888 88987431 0111 111 122 4599999999 999999
Q ss_pred ----EEeCCCeEEEEECCCCCC----CCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCC
Q 022870 81 ----SQGRDGTVKCWDIENGGL----SSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDS 152 (291)
Q Consensus 81 ----s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (291)
+++.|+.|++||+++... ..++...... +.+|.
T Consensus 109 v~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~h~ 149 (434)
T 2oit_A 109 ACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKL---------------------------------------LKDAG 149 (434)
T ss_dssp EEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEEC---------------------------------------CCSGG
T ss_pred EEEeccCCCceEEEEEccccccCCcCCcceeeeeec---------------------------------------cCCCC
Confidence 788999999999876410 0000000000 00111
Q ss_pred C----cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeec
Q 022870 153 K----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY 228 (291)
Q Consensus 153 ~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~ 228 (291)
. ++|+|++..+++ +++.||.|++||++++....... +| ...+.+++ |+|+ |+ +|++|+
T Consensus 150 ~~V~~v~~~p~~~~~la-s~s~Dg~v~iwD~~~~~~~~~~~--------~~----~~~v~~v~-wspd---g~-~lasgs 211 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVA-VCLADGSIAVLQVTETVKVCATL--------PS----TVAVTSVC-WSPK---GK-QLAVGK 211 (434)
T ss_dssp GSEEEEEECSSCTTEEE-EEETTSCEEEEEESSSEEEEEEE--------CG----GGCEEEEE-ECTT---SS-CEEEEE
T ss_pred CceEEEEECCCCCCEEE-EEECCCeEEEEEcCCCcceeecc--------CC----CCceeEEE-EcCC---CC-EEEEEc
Confidence 1 679998656666 56669999999999886655444 33 44677887 9998 44 899999
Q ss_pred CCCcEEEEEccCCCCceeeccc-------cccceeEEEeecCCCeeEEe-cCCC------eEEEEEcCCC
Q 022870 229 EDGSILVWDIRNPGIPLTAMKV-------HLEPVLCLSIDESCNGGISG-GADQ------KIVLYNLDHS 284 (291)
Q Consensus 229 ~dg~i~vwd~~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~s~-s~dg------~i~vw~~~~~ 284 (291)
.||.|++||++ ++....+.. |...|.+++|++++.++++. +.|| .+++|++++.
T Consensus 212 ~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 212 QNGTVVQYLPT--LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTSCEEEECTT--CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCCcEEEEccC--CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 99999999998 344444433 33489999999998877543 3343 3999999865
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=1.1e-20 Score=149.68 Aligned_cols=253 Identities=10% Similarity=0.060 Sum_probs=168.6
Q ss_pred CceEEecC-Ccc-ceeEEEEcCCCCEE-EEecCCCeEEEEeCCCCeEEEEEeeecC---CcceEEEEEeecCCCCeEEEE
Q 022870 9 DPVAVLRG-HRA-SVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSA---AHGIVSVATGPSIGLNKVISQ 82 (291)
Q Consensus 9 ~~~~~l~~-h~~-~v~~l~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~s~ 82 (291)
+.+..+.. +.. .+..++|+|+++++ +++..++.|.+||+.+++.+..+..... ...+.+++|+| ++++++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~~~ 99 (337)
T 1pby_B 22 AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSP--DGKTLAIY 99 (337)
T ss_dssp EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECT--TSSEEEEE
T ss_pred cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECC--CCCEEEEE
Confidence 44555552 222 58899999999765 5667789999999999988877664320 01367899999 98888888
Q ss_pred e------------CCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCC
Q 022870 83 G------------RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC 150 (291)
Q Consensus 83 ~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (291)
+ .++.|.+||+.+++... ..... .......+++........ ......+++............
T Consensus 100 ~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~--~~~~~-~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~~ 173 (337)
T 1pby_B 100 ESPVRLELTHFEVQPTRVALYDAETLSRRK--AFEAP-RQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPIQ 173 (337)
T ss_dssp EEEEEECSSCEEECCCEEEEEETTTTEEEE--EEECC-SSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEECST
T ss_pred ecccccccccccccCceEEEEECCCCcEEE--EEeCC-CCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeeecc
Confidence 6 57999999998765432 11111 111122233332222111 455666777665543322222
Q ss_pred C--CCcccCCCCCcEEEEecCCcC-----------------------eEEEEeCCCcceeeEecccccCCCCCCCCCcce
Q 022870 151 D--SKDDVPAEGPKYMAVAGEQLS-----------------------EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRG 205 (291)
Q Consensus 151 ~--~~~~~~~~~~~~~~~~g~~d~-----------------------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (291)
. ....|+|++..+++ ++..++ .|.+||+.+++.. .+... .+ ..
T Consensus 174 ~~~~~~~~s~dg~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~------~~----~~ 241 (337)
T 1pby_B 174 SWEAETYAQPDVLAVWN-QHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVR------IM----DV 241 (337)
T ss_dssp TTTTTTBCCCBCCCCCC-CCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEE------EC----SS
T ss_pred ccCCCceeCCCccEEee-eccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecC------CC----CC
Confidence 2 22789999987654 333333 4689999988765 33210 11 22
Q ss_pred eeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCc
Q 022870 206 MCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 206 ~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~ 285 (291)
....+. |+|+ |+ +++++ ++.|++||+.+ ++.+..+.. ...+.+++|+|++++|++++.++.|++||+++++
T Consensus 242 ~~~~~~-~s~d---g~-~l~~~--~~~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 242 FYFSTA-VNPA---KT-RAFGA--YNVLESFDLEK-NASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp CEEEEE-ECTT---SS-EEEEE--ESEEEEEETTT-TEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred ceeeEE-ECCC---CC-EEEEe--CCeEEEEECCC-CcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 345666 9998 44 67766 79999999988 777666654 3567899999999999988999999999999998
Q ss_pred eeeee
Q 022870 286 VSHCV 290 (291)
Q Consensus 286 ~~~~~ 290 (291)
.+..+
T Consensus 313 ~~~~~ 317 (337)
T 1pby_B 313 KKGQV 317 (337)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87654
No 137
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=9.4e-21 Score=150.95 Aligned_cols=225 Identities=11% Similarity=0.110 Sum_probs=143.9
Q ss_pred eEEecCCccceeEEEEcCCCCEEEEec-CCCeEEEEeCCC-Ce--EEEEEeeecC-------CcceEEEEEeecCCCCeE
Q 022870 11 VAVLRGHRASVTDVCFHQTKPILFAGT-TGGELRIWDTVQ-HR--TVSSSWVHSA-------AHGIVSVATGPSIGLNKV 79 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~~l~s~~-~dg~v~iwd~~~-~~--~~~~~~~~~~-------~~~v~~~~~~~~~~~~~l 79 (291)
+..+..|...+..++|+|+|++|++++ .++.|.+|++.. +. .+..+..... ...+.+++|+| +++++
T Consensus 78 ~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp--dg~l~ 155 (347)
T 3hfq_A 78 LNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP--DNRLA 155 (347)
T ss_dssp EEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT--TSCEE
T ss_pred eeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC--CCcEE
Confidence 344455777889999999999888877 789999999863 32 2333322110 12388999999 98866
Q ss_pred EEEeCCCeEEEEECCC-CCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCC
Q 022870 80 ISQGRDGTVKCWDIEN-GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPA 158 (291)
Q Consensus 80 ~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (291)
++...++.|.+|++.. ++................ .++|+|
T Consensus 156 v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~---------------------------------------~~~~sp 196 (347)
T 3hfq_A 156 VIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPR---------------------------------------HLVFSP 196 (347)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEE---------------------------------------EEEECT
T ss_pred EEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCc---------------------------------------eEEECC
Confidence 6667789999999983 321100000000000000 056999
Q ss_pred CCCcEEEEecCCcCeEEEEeCCC--cce--eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEE
Q 022870 159 EGPKYMAVAGEQLSEVEIWDLNT--AER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 234 (291)
Q Consensus 159 ~~~~~~~~~g~~d~~i~~wd~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~ 234 (291)
+|+.+++ ++..++.+.+|++.. ++. +..+... . .. ......+..+. |+|+ |+.++++...++.|.
T Consensus 197 dg~~l~v-~~~~~~~v~v~~~~~~~g~~~~~~~~~~~--~---~~-~~~~~~~~~i~-~spd---G~~l~v~~~~~~~v~ 265 (347)
T 3hfq_A 197 DGQYAFL-AGELSSQIASLKYDTQTGAFTQLGIVKTI--P---AD-YTAHNGAAAIR-LSHD---GHFLYVSNRGYNTLA 265 (347)
T ss_dssp TSSEEEE-EETTTTEEEEEEEETTTTEEEEEEEEESS--C---TT-CCSCCEEEEEE-ECTT---SCEEEEEEETTTEEE
T ss_pred CCCEEEE-EeCCCCEEEEEEecCCCCceEEeeeeeec--C---CC-CCCCCcceeEE-ECCC---CCEEEEEeCCCCEEE
Confidence 9986665 556689999999874 432 2222210 0 00 00113466776 9998 552346667789999
Q ss_pred EEEccCCC--CceeeccccccceeEEEeecCCCeeEEecC-CCeEEEE--EcCCCcee
Q 022870 235 VWDIRNPG--IPLTAMKVHLEPVLCLSIDESCNGGISGGA-DQKIVLY--NLDHSTVS 287 (291)
Q Consensus 235 vwd~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-dg~i~vw--~~~~~~~~ 287 (291)
+||+...+ +.+..+..+...+..++|+|++++|++++. ++.|.+| |.+++++.
T Consensus 266 v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 266 VFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 99997322 344555566667899999999998877765 4899999 55566655
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=1.5e-20 Score=164.40 Aligned_cols=238 Identities=9% Similarity=-0.056 Sum_probs=164.2
Q ss_pred ccceeEEEEcCCCCEEEEecC-CC-----eEEEEeCCCCeEEEEEeeecCC----------------------cceEEEE
Q 022870 18 RASVTDVCFHQTKPILFAGTT-GG-----ELRIWDTVQHRTVSSSWVHSAA----------------------HGIVSVA 69 (291)
Q Consensus 18 ~~~v~~l~~~~~~~~l~s~~~-dg-----~v~iwd~~~~~~~~~~~~~~~~----------------------~~v~~~~ 69 (291)
...|.+++|+|||++|++++. |+ .|++||+.+++....+..+... ..|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456999999999999999988 88 9999999999887766654322 2378999
Q ss_pred EeecCCCCeEEEEeCCCeEEEEECCCC---CCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccc
Q 022870 70 TGPSIGLNKVISQGRDGTVKCWDIENG---GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT 146 (291)
Q Consensus 70 ~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (291)
|+| ||++|++++. +.|++||+.++ +... +...........+++......... ...+.++++........
T Consensus 116 ~Sp--Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~---l~~~~~~~~~~~~SPDG~~la~~~--~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 116 WSP--DAQRLLFPLG-GELYLYDLKQEGKAAVRQ---LTHGEGFATDAKLSPKGGFVSFIR--GRNLWVIDLASGRQMQL 187 (741)
T ss_dssp ECT--TSSEEEEEET-TEEEEEESSSCSTTSCCB---CCCSSSCEEEEEECTTSSEEEEEE--TTEEEEEETTTTEEEEC
T ss_pred ECC--CCCEEEEEeC-CcEEEEECCCCCcceEEE---cccCCcccccccCCCCCCEEEEEe--CCcEEEEecCCCCEEEe
Confidence 999 9999998886 89999999987 4321 122223444555665554433322 23455566655443222
Q ss_pred cCCCC-------------------CCcccCCCCCcEEEEecCCcC---------------------------------eE
Q 022870 147 DSLCD-------------------SKDDVPAEGPKYMAVAGEQLS---------------------------------EV 174 (291)
Q Consensus 147 ~~~~~-------------------~~~~~~~~~~~~~~~~g~~d~---------------------------------~i 174 (291)
..... ..++|+|||+.+++++. |+ .|
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~--d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI--DESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE--ECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE--cCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 22111 22899999988775432 32 78
Q ss_pred EEEeCCC-cceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeec-----CCCcEEEEEccCCCCceeec
Q 022870 175 EIWDLNT-AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY-----EDGSILVWDIRNPGIPLTAM 248 (291)
Q Consensus 175 ~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~-----~dg~i~vwd~~~~~~~~~~~ 248 (291)
++||+.+ ++...... . ......+..+. | |+ |+ .|++++ .+..|++||+.+ ++....+
T Consensus 266 ~~~d~~~~~~~~~~~~--------~--~~~~~~~~~~~-~-pD---g~-~l~~~~~~~~~~~~~i~~~d~~~-g~~~~~~ 328 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDL--------G--KEQDIYLARVN-W-RD---PQ-HLSFQRQSRDQKKLDLVEVTLAS-NQQRVLA 328 (741)
T ss_dssp EEECSSTTCCCEEECC--------C--SCSSEEEEEEE-E-EE---TT-EEEEEEEETTSSEEEEEEEETTT-CCEEEEE
T ss_pred EEEECCCCCceEEecC--------C--CCcceEEEEEE-e-CC---CC-EEEEEEecccCCeEEEEEEECCC-CceEEEE
Confidence 8999988 76543332 1 11245677787 9 98 55 666543 367899999998 6666666
Q ss_pred ccccc----ceeEEEeecCCCeeEEecCCCeEEEEEcC
Q 022870 249 KVHLE----PVLCLSIDESCNGGISGGADQKIVLYNLD 282 (291)
Q Consensus 249 ~~h~~----~v~~~~~~~~~~~l~s~s~dg~i~vw~~~ 282 (291)
..+.. .+..++|+|+|+++++++.||.++||.++
T Consensus 329 ~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 329 HETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp EEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEEC
T ss_pred EcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEc
Confidence 65543 45689999999999999999988888776
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=5.5e-20 Score=145.45 Aligned_cols=239 Identities=10% Similarity=0.036 Sum_probs=153.5
Q ss_pred EEcCCCC-EEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeC-CCeEEEEECCCCCC-CCC
Q 022870 25 CFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR-DGTVKCWDIENGGL-SSN 101 (291)
Q Consensus 25 ~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~-~~~ 101 (291)
.|.+++. .+++++.++.|.+||..+++....+..+. .++ .++|+| +++++++++. ++.|.+||+.+++. ..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~-~~~~s~--dg~~l~~~~~~~~~i~~~d~~~~~~~~~- 77 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGY--DFV-DTAITS--DCSNVVVTSDFCQTLVQIETQLEPPKVV- 77 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCC--CEE-EEEECS--SSCEEEEEESTTCEEEEEECSSSSCEEE-
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccC--Ccc-eEEEcC--CCCEEEEEeCCCCeEEEEECCCCceeEE-
Confidence 4555444 47788899999999999999888877654 336 999999 9887766655 89999999998764 22
Q ss_pred CccccccceEEEEEeecccCccceeccCC-C--CceeeecccCccccccCCCCCC--cccCCCCCcEEEEecCCcCe-EE
Q 022870 102 PSLTIKTNSYHFCKLSLVKEPYANAKQAN-E--PKDCYEREVGETVDTDSLCDSK--DDVPAEGPKYMAVAGEQLSE-VE 175 (291)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~d~~-i~ 175 (291)
.............+++...... ..... . ....|++...........+... ++|+|+|+.++++ +..++. +.
T Consensus 78 -~~~~~~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~-~~~~~~~i~ 154 (331)
T 3u4y_A 78 -AIQEGQSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILI-DRSSANTVR 154 (331)
T ss_dssp -EEEECSSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEE-EETTTTEEE
T ss_pred -ecccCCCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEE-ecCCCceEE
Confidence 1111111211133333333333 22222 2 5667777665543332222222 9999999887764 444567 99
Q ss_pred EEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCc---eeeccccc
Q 022870 176 IWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP---LTAMKVHL 252 (291)
Q Consensus 176 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~---~~~~~~h~ 252 (291)
+|++.....+........ . .......+. |+|+ |+.+++++..++.|++||+.+ ++. +..+.. .
T Consensus 155 ~~~~~~~g~~~~~~~~~~----~----~~~~~~~~~-~spd---g~~l~v~~~~~~~v~v~d~~~-~~~~~~~~~~~~-~ 220 (331)
T 3u4y_A 155 RFKIDADGVLFDTGQEFI----S----GGTRPFNIT-FTPD---GNFAFVANLIGNSIGILETQN-PENITLLNAVGT-N 220 (331)
T ss_dssp EEEECTTCCEEEEEEEEE----C----SSSSEEEEE-ECTT---SSEEEEEETTTTEEEEEECSS-TTSCEEEEEEEC-S
T ss_pred EEEECCCCcEeecCCccc----c----CCCCccceE-ECCC---CCEEEEEeCCCCeEEEEECCC-CcccceeeeccC-C
Confidence 999886443321110000 0 112245665 9998 553556666789999999987 666 666664 4
Q ss_pred cceeEEEeecCCCeeEEe-cCCCeEEEEEcCCCce
Q 022870 253 EPVLCLSIDESCNGGISG-GADQKIVLYNLDHSTV 286 (291)
Q Consensus 253 ~~v~~~~~~~~~~~l~s~-s~dg~i~vw~~~~~~~ 286 (291)
..+..++|+|+|++|+.+ ..++.|.+||++++++
T Consensus 221 ~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 221 NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 667899999999976544 4578999999999887
No 140
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=2.2e-21 Score=165.01 Aligned_cols=241 Identities=8% Similarity=-0.040 Sum_probs=161.3
Q ss_pred CccceeEEEEcCCCCEEEEecC-CCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeC---CCeEEEEE
Q 022870 17 HRASVTDVCFHQTKPILFAGTT-GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR---DGTVKCWD 92 (291)
Q Consensus 17 h~~~v~~l~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~---dg~i~iwd 92 (291)
+..+|++++|+|||+.||+++. ||+++||++..++... +..+.. ..+.+++|+| | +.+++++. +...++|.
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~-~~~~~~~~sp--d-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPI-NSVLDPHYGV--G-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCC-SEECEECTTC--S-EEEEEEECSTTSCCEEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccc-cccccccCCC--C-eEEEEeccCCCCcceEEEE
Confidence 3668999999999999999887 9999999987666544 443431 3489999999 8 77777765 45566665
Q ss_pred CCC--CCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecC-
Q 022870 93 IEN--GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE- 169 (291)
Q Consensus 93 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~- 169 (291)
+.. ..... .+..... .....+++................+|++...............++|+|||+.++.++..
T Consensus 95 ~~~~~~g~~~-~l~~~~~--~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~ 171 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEAVKP--MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFG 171 (582)
T ss_dssp EETTSTTCCE-ECTTSCS--BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEE
T ss_pred EeccCCCccc-cccCCCC--ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcC
Confidence 543 21111 1111111 22335555554444444444444467766554222111111228899999876643221
Q ss_pred -CcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCC--cEEEEEccCCCCcee
Q 022870 170 -QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG--SILVWDIRNPGIPLT 246 (291)
Q Consensus 170 -~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg--~i~vwd~~~~~~~~~ 246 (291)
..+.|++||+.+++.. .+. .| .+.+..+. |+|+ |+ .|+++..++ .|++||+.+ ++..
T Consensus 172 ~~~~~i~~~d~~~g~~~-~l~--------~~----~~~~~~~~-~SpD---G~-~l~~~~~~~~~~i~~~d~~~-~~~~- 231 (582)
T 3o4h_A 172 GGRVSLFTSNLSSGGLR-VFD--------SG----EGSFSSAS-ISPG---MK-VTAGLETAREARLVTVDPRD-GSVE- 231 (582)
T ss_dssp TTEEEEEEEETTTCCCE-EEC--------CS----SCEEEEEE-ECTT---SC-EEEEEECSSCEEEEEECTTT-CCEE-
T ss_pred CCCeEEEEEcCCCCCce-Eee--------cC----CCccccce-ECCC---CC-EEEEccCCCeeEEEEEcCCC-CcEE-
Confidence 1167999999988754 444 33 33456676 9998 55 788888888 899999997 6666
Q ss_pred eccccccceeEEE--------eecCCCeeEEecCCCeEEEEEcCCCcee
Q 022870 247 AMKVHLEPVLCLS--------IDESCNGGISGGADQKIVLYNLDHSTVS 287 (291)
Q Consensus 247 ~~~~h~~~v~~~~--------~~~~~~~l~s~s~dg~i~vw~~~~~~~~ 287 (291)
.+.+|...+..++ |+|+|.++++++.|+.+++|++ ++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 232 DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERV 278 (582)
T ss_dssp ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEE
T ss_pred EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCee
Confidence 7778887787778 9999988899999999999999 5544
No 141
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=7.2e-20 Score=145.68 Aligned_cols=249 Identities=10% Similarity=0.097 Sum_probs=158.4
Q ss_pred EEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEE-EEeCCCeEEEEECCCCCCCCC
Q 022870 23 DVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLSSN 101 (291)
Q Consensus 23 ~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~ 101 (291)
.+++++++.++++++.+++|++||+.+++.+..+..+.. ..+..++|+| ++++++ +...++.|.+||+.+++...
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~--dg~~~~v~~~~~~~i~~~d~~t~~~~~- 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDK-FGPGTAMMAP--DNRTAYVLNNHYGDIYGIDLDTCKNTF- 79 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSC-CSSCEEEECT--TSSEEEEEETTTTEEEEEETTTTEEEE-
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCC-CCCceeEECC--CCCEEEEEeCCCCcEEEEeCCCCcEEE-
Confidence 467888888999999999999999999998888775531 1378999999 887655 55678999999998876432
Q ss_pred Cccccccc------eEEEEEeecccCccceeccC-----------CCCceeeecccCccccc--cCCCCCC---cccCCC
Q 022870 102 PSLTIKTN------SYHFCKLSLVKEPYANAKQA-----------NEPKDCYEREVGETVDT--DSLCDSK---DDVPAE 159 (291)
Q Consensus 102 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~ 159 (291)
....... ......+++........... ......+++........ ....... ++|+|+
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~d 158 (349)
T 1jmx_B 80 -HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADD 158 (349)
T ss_dssp -EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTT
T ss_pred -EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCC
Confidence 1111110 01122233332222222211 24556666655322111 1111111 679999
Q ss_pred CCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCC------------CCCCCc------------------------
Q 022870 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSP------------NFSSKG------------------------ 203 (291)
Q Consensus 160 ~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~------------~~~~~~------------------------ 203 (291)
|+ +++ + + +.|.+||+.+++....+......... ......
T Consensus 159 g~-l~~-~-~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 233 (349)
T 1jmx_B 159 GS-LYV-A-G--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLY 233 (349)
T ss_dssp SC-EEE-E-S--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEE
T ss_pred Cc-EEE-c-c--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccce
Confidence 98 654 3 2 34999999998877766531100000 000000
Q ss_pred --------------------ceeeeeEEEecC-CCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeec
Q 022870 204 --------------------RGMCMAVQAYLP-SKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDE 262 (291)
Q Consensus 204 --------------------~~~~~~~~~~~p-~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~ 262 (291)
......+. |+| + |+ +++++ ++.|++||+.+ ++.+..+.. ...+.+++|+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~sp~d---g~-~l~~~--~~~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~ 304 (349)
T 1jmx_B 234 GYLSVDLKTGKTHTQEFADLTELYFTGL-RSPKD---PN-QIYGV--LNRLAKYDLKQ-RKLIKAANL-DHTYYCVAFDK 304 (349)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEE-ECSSC---TT-EEEEE--ESEEEEEETTT-TEEEEEEEC-SSCCCEEEECS
T ss_pred eEEEEeccCCcEEecccccCCCcceeeE-ecCCC---CC-EEEEE--cCeEEEEECcc-CeEEEEEcC-CCCccceEECC
Confidence 00123444 667 6 54 66666 88999999998 776666653 34578999999
Q ss_pred CCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 263 SCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 263 ~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
++++|++++.++.|++||+++++.+..+
T Consensus 305 dg~~l~~~~~~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 305 KGDKLYLGGTFNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp SSSCEEEESBSSEEEEEETTTTEEEEEE
T ss_pred CCCEEEEecCCCeEEEEeccccceeeee
Confidence 9998988888999999999999887654
No 142
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=3.3e-20 Score=151.76 Aligned_cols=161 Identities=9% Similarity=0.032 Sum_probs=113.9
Q ss_pred CccceeEEEEcCCCCEEE----EecCCCeEEEEeCCCC--------eE---EEEEeeecCCcceEEEEEeecCC-CCeEE
Q 022870 17 HRASVTDVCFHQTKPILF----AGTTGGELRIWDTVQH--------RT---VSSSWVHSAAHGIVSVATGPSIG-LNKVI 80 (291)
Q Consensus 17 h~~~v~~l~~~~~~~~l~----s~~~dg~v~iwd~~~~--------~~---~~~~~~~~~~~~v~~~~~~~~~~-~~~l~ 80 (291)
|...|++++|+|++++|+ +|+.|+.|+|||+.++ +. ...+.+|. .+|.+++|+| + +++|+
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~--~~V~~v~~~p--~~~~~la 166 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAG--GMVIDMKWNP--TVPSMVA 166 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGG--GSEEEEEECS--SCTTEEE
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCC--CceEEEEECC--CCCCEEE
Confidence 667899999999999999 8999999999998654 22 34445576 4499999999 6 68999
Q ss_pred EEeCCCeEEEEECCCCCCCCCCcccccc-ceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCC
Q 022870 81 SQGRDGTVKCWDIENGGLSSNPSLTIKT-NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAE 159 (291)
Q Consensus 81 s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (291)
+++.||+|++||++++.... .... .....+ ++|+|+
T Consensus 167 s~s~Dg~v~iwD~~~~~~~~----~~~~~~~~v~~---------------------------------------v~wspd 203 (434)
T 2oit_A 167 VCLADGSIAVLQVTETVKVC----ATLPSTVAVTS---------------------------------------VCWSPK 203 (434)
T ss_dssp EEETTSCEEEEEESSSEEEE----EEECGGGCEEE---------------------------------------EEECTT
T ss_pred EEECCCeEEEEEcCCCccee----eccCCCCceeE---------------------------------------EEEcCC
Confidence 99999999999998763211 1100 000111 669999
Q ss_pred CCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCC---CcceeeeeEEEecCCCCCCceEE-EeecCCC----
Q 022870 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSS---KGRGMCMAVQAYLPSKSQGFVNV-LAGYEDG---- 231 (291)
Q Consensus 160 ~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~g~~~l-~~g~~dg---- 231 (291)
|..++ +|+.||.|++||++ ++....+. .|.. .....+.++. |+++ +. ++ +.+..+|
T Consensus 204 g~~la--sgs~dg~v~iwd~~-~~~~~~~~--------~~~~~~~~~~~~v~~v~-w~~~---~~-~l~~~~~~dg~~~~ 267 (434)
T 2oit_A 204 GKQLA--VGKQNGTVVQYLPT-LQEKKVIP--------CPPFYESDHPVRVLDVL-WIGT---YV-FAIVYAAADGTLET 267 (434)
T ss_dssp SSCEE--EEETTSCEEEECTT-CCEEEEEC--------CCTTCCTTSCEEEEEEE-EEET---TE-EEEEEEETTCCSSS
T ss_pred CCEEE--EEcCCCcEEEEccC-Cccccccc--------CCcccCCCCceeEEEEE-EecC---ce-EEEEEccCCCccCC
Confidence 87766 56679999999998 55555554 2221 1234778887 9886 43 44 3344443
Q ss_pred --cEEEEEccC
Q 022870 232 --SILVWDIRN 240 (291)
Q Consensus 232 --~i~vwd~~~ 240 (291)
.+++|+++.
T Consensus 268 ~~~v~i~~l~~ 278 (434)
T 2oit_A 268 SPDVVMALLPK 278 (434)
T ss_dssp CCEEEEEECCC
T ss_pred CCceEEEEecc
Confidence 389999986
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=2.4e-20 Score=162.64 Aligned_cols=210 Identities=9% Similarity=0.020 Sum_probs=146.4
Q ss_pred cceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCC-cceEEEEEeecCCCCeEEEEeCC---------CeE
Q 022870 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA-HGIVSVATGPSIGLNKVISQGRD---------GTV 88 (291)
Q Consensus 19 ~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~~~d---------g~i 88 (291)
..+.+++|+|||+++++ +.||+|++||+.+++....+..|... ..|.+++|+| ||++|++++.+ +.|
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~Sp--Dg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISP--DREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECT--TSSEEEEEESCCCCSSSCCCSEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECC--CCCEEEEEecCccceeecceeeE
Confidence 34788999999997776 78999999999999887777655420 1389999999 99999998764 788
Q ss_pred EEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEec
Q 022870 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (291)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 168 (291)
.+||+.+++... +......... . ..++|+|+|+.++.++
T Consensus 94 ~~~d~~~~~~~~--l~~~~~~~~~-----~---------------------------------~~~~~SPdG~~la~~~- 132 (723)
T 1xfd_A 94 VLSKIPHGDPQS--LDPPEVSNAK-----L---------------------------------QYAGWGPKGQQLIFIF- 132 (723)
T ss_dssp EEEESSSCCCEE--CCCTTCCSCC-----C---------------------------------SBCCBCSSTTCEEEEE-
T ss_pred EEEECCCCceEe--ccCCcccccc-----c---------------------------------cccEECCCCCEEEEEE-
Confidence 899999875411 1000000000 0 0066999998776532
Q ss_pred CCcCeEEEEeCCCcceeeEecccccCCCCCCCCCc--------------ceeeeeEEEecCCCCCCceEEEeecCCC---
Q 022870 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKG--------------RGMCMAVQAYLPSKSQGFVNVLAGYEDG--- 231 (291)
Q Consensus 169 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~p~~~~g~~~l~~g~~dg--- 231 (291)
++.|++||+.+++...... .+.... .....++. |+|+ |+ .|++++.|+
T Consensus 133 --~~~i~~~~~~~g~~~~~~~--------~~~~~~~~~g~~~~v~~ee~~~~~~~~~-~SpD---g~-~la~~~~~~~~~ 197 (723)
T 1xfd_A 133 --ENNIYYCAHVGKQAIRVVS--------TGKEGVIYNGLSDWLYEEEILKTHIAHW-WSPD---GT-RLAYAAINDSRV 197 (723)
T ss_dssp --TTEEEEESSSSSCCEEEEC--------CCBTTTEEEEECCHHHHHTTSSSSEEEE-ECTT---SS-EEEEEEEECTTS
T ss_pred --CCeEEEEECCCCceEEEec--------CCCCCceECcccceeEEEEeccCcceEE-ECCC---CC-EEEEEEECCCcc
Confidence 3789999999887665544 221111 01124565 9998 55 777766442
Q ss_pred -------------------------------cEEEEEccCCCCceeecccc------ccceeEEEeecCCCeeEEecC--
Q 022870 232 -------------------------------SILVWDIRNPGIPLTAMKVH------LEPVLCLSIDESCNGGISGGA-- 272 (291)
Q Consensus 232 -------------------------------~i~vwd~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~s~-- 272 (291)
.|++||+.+ ++....+..+ ...+.+++|+|||++|++.+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~-~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 276 (723)
T 1xfd_A 198 PIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNG-PTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRA 276 (723)
T ss_dssp CEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSS-SCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETT
T ss_pred ceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCC-CceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCC
Confidence 799999987 5544555543 678999999999998876643
Q ss_pred --CCeEEEEEcCCCceee
Q 022870 273 --DQKIVLYNLDHSTVSH 288 (291)
Q Consensus 273 --dg~i~vw~~~~~~~~~ 288 (291)
+..|++||+.++++..
T Consensus 277 ~~~~~i~~~d~~~g~~~~ 294 (723)
T 1xfd_A 277 QNVSILTLCDATTGVCTK 294 (723)
T ss_dssp SCEEEEEEEETTTCCEEE
T ss_pred CCeEEEEEEeCCCCcceE
Confidence 3689999999987654
No 144
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=7.5e-18 Score=134.91 Aligned_cols=250 Identities=7% Similarity=0.007 Sum_probs=151.4
Q ss_pred CccceeEEEEcCCCCEEEEecCC----CeEEEEeCCC--CeEEE--EEeeecCCcceEEEEEeecCCCCeEEEEe-CCCe
Q 022870 17 HRASVTDVCFHQTKPILFAGTTG----GELRIWDTVQ--HRTVS--SSWVHSAAHGIVSVATGPSIGLNKVISQG-RDGT 87 (291)
Q Consensus 17 h~~~v~~l~~~~~~~~l~s~~~d----g~v~iwd~~~--~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~ 87 (291)
|...+..++|+|+|++|++++.+ +.|.+|++.. ++... ....+. .....+++ ++++|++++ .++.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~--~~p~~~~~----dg~~l~~~~~~~~~ 121 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMG--ADPCYLTT----NGKNIVTANYSGGS 121 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSS--SCEEEEEE----CSSEEEEEETTTTE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCC--CCcEEEEE----CCCEEEEEECCCCE
Confidence 66778889999999999988876 7999998765 44332 222222 23666666 346666555 6889
Q ss_pred EEEEECCCCCCCCCCccccc------------cceEEEEEeecccCccceeccCCCCceeeecccCcc------c-----
Q 022870 88 VKCWDIENGGLSSNPSLTIK------------TNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGET------V----- 144 (291)
Q Consensus 88 i~iwd~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~----- 144 (291)
|.+|++.............. ....+...+++................+|++..... .
T Consensus 122 v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~ 201 (361)
T 3scy_A 122 ITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGT 201 (361)
T ss_dssp EEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEE
T ss_pred EEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccc
Confidence 99999976543321111000 011233445544433333333344556666654331 1
Q ss_pred --cccCCCCCC---cccCCCCCcEEEEecCCcCeEEEEeCCCcce--eeEecccccCCCCCCCCCcceeeeeEEEecCCC
Q 022870 145 --DTDSLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSK 217 (291)
Q Consensus 145 --~~~~~~~~~---~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 217 (291)
......... ++|+|+|+.+++ ++..++.|.+||+.+++. +..+. .... .......+. |+|+
T Consensus 202 ~~~~~~~~~~~~~~~~~spdg~~l~v-~~~~~~~v~v~~~~~g~~~~~~~~~--------~~~~-~~~~~~~i~-~spd- 269 (361)
T 3scy_A 202 PEAFKVAPGSGPRHLIFNSDGKFAYL-INEIGGTVIAFRYADGMLDEIQTVA--------ADTV-NAQGSGDIH-LSPD- 269 (361)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEE-EETTTCEEEEEEEETTEEEEEEEEE--------SCSS-CCCCEEEEE-ECTT-
T ss_pred ccceecCCCCCCeEEEEcCCCCEEEE-EcCCCCeEEEEEecCCceEEeEEEe--------cCCC-CCCCcccEE-ECCC-
Confidence 111222222 899999987665 455589999999987654 22222 1111 112235666 9998
Q ss_pred CCCceEEEeec-C-CCcEEEEEccC-CCC--ceeeccccccceeEEEeecCCCeeEEec-CCCeEEEEEc--CCCceee
Q 022870 218 SQGFVNVLAGY-E-DGSILVWDIRN-PGI--PLTAMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNL--DHSTVSH 288 (291)
Q Consensus 218 ~~g~~~l~~g~-~-dg~i~vwd~~~-~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~dg~i~vw~~--~~~~~~~ 288 (291)
|+ +|+++. . ++.|.+|++.. .++ .+..+.. ...+..++|+|+|++|++++ .++.|.+|++ +++++..
T Consensus 270 --g~-~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 270 --GK-YLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp --SS-EEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred --CC-EEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 55 665554 4 58999999962 133 3334443 45788999999999887776 6789999655 4666543
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=1e-19 Score=159.01 Aligned_cols=241 Identities=13% Similarity=0.040 Sum_probs=156.1
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEeCCCCe--EEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCC
Q 022870 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG 97 (291)
Q Consensus 20 ~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 97 (291)
.|.+++|+|||++|++++. +.|++||+.++. ....+..+.. .+.+++|+| ||++|+.++. +.|++||+.+++
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~--~~~~~~~SP--DG~~la~~~~-~~i~~~d~~~g~ 183 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEG--FATDAKLSP--KGGFVSFIRG-RNLWVIDLASGR 183 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSS--CEEEEEECT--TSSEEEEEET-TEEEEEETTTTE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCc--ccccccCCC--CCCEEEEEeC-CcEEEEecCCCC
Confidence 4899999999999998886 899999998872 3344555553 499999999 9999998874 699999998765
Q ss_pred CCCCCccccccce----------------EEEEEeecccCccceeccCCC------------------------------
Q 022870 98 LSSNPSLTIKTNS----------------YHFCKLSLVKEPYANAKQANE------------------------------ 131 (291)
Q Consensus 98 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~------------------------------ 131 (291)
... +....... .....+++.............
T Consensus 184 ~~~--~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 184 QMQ--LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp EEE--CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred EEE--eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 422 11111100 112334444333332222111
Q ss_pred --Cceeeeccc-CccccccCC-CCCC----cccCCCCCcEEEEec---CCcCeEEEEeCCCcceeeEecccccCCCCCCC
Q 022870 132 --PKDCYEREV-GETVDTDSL-CDSK----DDVPAEGPKYMAVAG---EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFS 200 (291)
Q Consensus 132 --~~~~~~~~~-~~~~~~~~~-~~~~----~~~~~~~~~~~~~~g---~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 200 (291)
.+..+++.. ......... .+.. ++| |+|+.+++.+. ..+..|++||+.+++....+.. +.
T Consensus 262 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~--------~~ 332 (741)
T 2ecf_A 262 QVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE--------TS 332 (741)
T ss_dssp EEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE--------EC
T ss_pred eeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc--------CC
Confidence 223344444 332221111 2222 889 99988776433 2467899999999887666652 21
Q ss_pred CCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEE-EeecCCCeeE-EecCCC--eE
Q 022870 201 SKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCL-SIDESCNGGI-SGGADQ--KI 276 (291)
Q Consensus 201 ~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~l~-s~s~dg--~i 276 (291)
......+..+. |+|+ |+ ++++++.||.++||.+...+. ...+..|...|..+ .|+|+++.|+ +++.++ .+
T Consensus 333 ~~~~~~~~~~~-~spd---g~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~ 406 (741)
T 2ecf_A 333 PTWVPLHNSLR-FLDD---GS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARES 406 (741)
T ss_dssp SSCCCCCSCCE-ECTT---SC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCB
T ss_pred CCcCCcCCceE-ECCC---Ce-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceE
Confidence 10000223454 9998 55 888999999888887763245 77888888888887 5999998775 555555 89
Q ss_pred EEEEcCC
Q 022870 277 VLYNLDH 283 (291)
Q Consensus 277 ~vw~~~~ 283 (291)
++|+++.
T Consensus 407 ~l~~~~~ 413 (741)
T 2ecf_A 407 QIYAVPL 413 (741)
T ss_dssp EEEEEET
T ss_pred EEEEEEc
Confidence 9999864
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.84 E-value=1.6e-18 Score=138.22 Aligned_cols=238 Identities=10% Similarity=0.062 Sum_probs=156.9
Q ss_pred CceEEecCCccceeEEEEcCCCCEE-EEecCCCeEEEEeCCCCeEEEEEeeecCCc-------ceEEEEEeecCCCCeEE
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSAAH-------GIVSVATGPSIGLNKVI 80 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~~l~ 80 (291)
+.+..+.. ...+..++|+|+|+++ ++...++.|.+||..+++.+..+..+.... .+.+++|+| ++++++
T Consensus 80 ~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~ 156 (353)
T 3vgz_A 80 EVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD--ATNTVY 156 (353)
T ss_dssp CEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET--TTTEEE
T ss_pred eEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC--CCCEEE
Confidence 44555543 3457889999999855 555668999999999999888877654211 268899999 988877
Q ss_pred EEe--CCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCC---CCCC--
Q 022870 81 SQG--RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSL---CDSK-- 153 (291)
Q Consensus 81 s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-- 153 (291)
+++ .++.|.+||..+++... .............+++...... ..........++............ ++..
T Consensus 157 ~~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~s~dg~~l~-~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 233 (353)
T 3vgz_A 157 ISGIGKESVIWVVDGGNIKLKT--AIQNTGKMSTGLALDSEGKRLY-TTNADGELITIDTADNKILSRKKLLDDGKEHFF 233 (353)
T ss_dssp EEEESSSCEEEEEETTTTEEEE--EECCCCTTCCCCEEETTTTEEE-EECTTSEEEEEETTTTEEEEEEECCCSSSCCCE
T ss_pred EEecCCCceEEEEcCCCCceEE--EecCCCCccceEEECCCCCEEE-EEcCCCeEEEEECCCCeEEEEEEcCCCCCCccc
Confidence 665 47899999998876533 1111111112222333322221 222234455566665544332221 1111
Q ss_pred --cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCC
Q 022870 154 --DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG 231 (291)
Q Consensus 154 --~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg 231 (291)
++|+|+++.+++ +...++.|.+||+.+++.+..+.. +. ...+. |+|+ |+.++++...++
T Consensus 234 ~~~~~s~dg~~l~~-~~~~~~~v~~~d~~~~~~~~~~~~-------~~-------~~~~~-~s~d---g~~l~v~~~~~~ 294 (353)
T 3vgz_A 234 INISLDTARQRAFI-TDSKAAEVLVVDTRNGNILAKVAA-------PE-------SLAVL-FNPA---RNEAYVTHRQAG 294 (353)
T ss_dssp EEEEEETTTTEEEE-EESSSSEEEEEETTTCCEEEEEEC-------SS-------CCCEE-EETT---TTEEEEEETTTT
T ss_pred ceEEECCCCCEEEE-EeCCCCEEEEEECCCCcEEEEEEc-------CC-------CceEE-ECCC---CCEEEEEECCCC
Confidence 789999987765 455579999999999988877763 11 13454 9998 443555666799
Q ss_pred cEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCC
Q 022870 232 SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD 273 (291)
Q Consensus 232 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d 273 (291)
.|.+||..+ ++.+..+.. ...+.+++|+|++++|+.+..+
T Consensus 295 ~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 295 KVSVIDAKS-YKVVKTFDT-PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEETTT-TEEEEEEEC-CSEEEEEEECTTSCEEEEEEEC
T ss_pred eEEEEECCC-CeEEEEEec-CCCCCeEEEcCCCCEEEEEEcc
Confidence 999999998 777777765 3467999999999977665554
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.83 E-value=7.9e-19 Score=152.67 Aligned_cols=251 Identities=10% Similarity=-0.001 Sum_probs=158.3
Q ss_pred eEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCC-----CeEEEEEeeecCC------------cceEEEEEeec
Q 022870 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-----HRTVSSSWVHSAA------------HGIVSVATGPS 73 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~-----~~~~~~~~~~~~~------------~~v~~~~~~~~ 73 (291)
...+..|...+.+++|+|||++|+++ .|+.|++||+.+ ++.......+... ..+.++.|+|
T Consensus 113 ~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp- 190 (706)
T 2z3z_A 113 VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP- 190 (706)
T ss_dssp EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECT-
T ss_pred eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECC-
Confidence 34455677889999999999999985 679999999988 7765544333221 0147999999
Q ss_pred CCCCeEEEEe---------------------------------CCCeEEEEECCCCCCCCCCccccccceEEEEEeeccc
Q 022870 74 IGLNKVISQG---------------------------------RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVK 120 (291)
Q Consensus 74 ~~~~~l~s~~---------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (291)
||++|++++ .+..|.+||+.+++..................+++..
T Consensus 191 -Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 269 (706)
T 2z3z_A 191 -KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDE 269 (706)
T ss_dssp -TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTS
T ss_pred -CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCC
Confidence 999999887 4468999999887642210001112233444555554
Q ss_pred CccceeccCC----CCceeeecccC-ccccc---cCCCC----CCcccCC--CCCcEEEEecCCcCeEEEEeCC-Cccee
Q 022870 121 EPYANAKQAN----EPKDCYEREVG-ETVDT---DSLCD----SKDDVPA--EGPKYMAVAGEQLSEVEIWDLN-TAERC 185 (291)
Q Consensus 121 ~~~~~~~~~~----~~~~~~~~~~~-~~~~~---~~~~~----~~~~~~~--~~~~~~~~~g~~d~~i~~wd~~-~~~~~ 185 (291)
.......... .....++.... ..... ..... ..++|+| +|+ +++ +++.|+.++||++. ++..+
T Consensus 270 ~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~-~~~~~g~~~l~~~~~~~~~~ 347 (706)
T 2z3z_A 270 NILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIW-QSRRDGWNHLYLYDTTGRLI 347 (706)
T ss_dssp SEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE-EEE-EECTTSSCEEEEEETTSCEE
T ss_pred CEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE-EEE-EEccCCccEEEEEECCCCEE
Confidence 4333322222 23444555544 21111 11111 1278999 886 444 56668889999876 55566
Q ss_pred eEecccccCCCCCCCCCcceeeee-EEEecCCCCCCceEEEeecCCC----cEEEEEccCCCCceeeccccccceeEEEe
Q 022870 186 TRLHQNSCGGSPNFSSKGRGMCMA-VQAYLPSKSQGFVNVLAGYEDG----SILVWDIRNPGIPLTAMKVHLEPVLCLSI 260 (291)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~g~~~l~~g~~dg----~i~vwd~~~~~~~~~~~~~h~~~v~~~~~ 260 (291)
..+. .+. ..+.. +. |+|+ |+.+++++..++ .|+.||+.+ +. ...+. |...+.+++|
T Consensus 348 ~~l~--------~~~----~~v~~~~~-~spd---g~~l~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~-~~~~~~~~~~ 408 (706)
T 2z3z_A 348 RQVT--------KGE----WEVTNFAG-FDPK---GTRLYFESTEASPLERHFYCIDIKG-GK-TKDLT-PESGMHRTQL 408 (706)
T ss_dssp EECC--------CSS----SCEEEEEE-ECTT---SSEEEEEESSSCTTCBEEEEEETTC-CC-CEESC-CSSSEEEEEE
T ss_pred EecC--------CCC----eEEEeeeE-EcCC---CCEEEEEecCCCCceEEEEEEEcCC-CC-ceecc-CCCceEEEEE
Confidence 6665 332 22333 44 9998 443555666655 677777775 43 34444 5677999999
Q ss_pred ecCCCeeEEecCC----CeEEEEEcCCCc
Q 022870 261 DESCNGGISGGAD----QKIVLYNLDHST 285 (291)
Q Consensus 261 ~~~~~~l~s~s~d----g~i~vw~~~~~~ 285 (291)
+|++++|+....+ +.|++||+++++
T Consensus 409 spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 409 SPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp CTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 9999988766443 569999998876
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.83 E-value=2.4e-18 Score=137.02 Aligned_cols=217 Identities=11% Similarity=0.100 Sum_probs=134.4
Q ss_pred CCccceeEEEEcCCCCEEEEecC---CCeEEEEeCCCCe--EEEEEeeecCCcceEEEEEeecCCCCeEEEEe-CCCeEE
Q 022870 16 GHRASVTDVCFHQTKPILFAGTT---GGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQG-RDGTVK 89 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s~~~---dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~i~ 89 (291)
.+...+..++|+|+|+ |++++. ++.|.+||+.+++ .+..+..+. ..+..++|+| ++++|++++ .++.|.
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~--~~p~~~a~sp--dg~~l~~~~~~~~~v~ 111 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPG--TPPAYVAVDE--ARQLVYSANYHKGTAE 111 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEES--CCCSEEEEET--TTTEEEEEETTTTEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCC--CCCEEEEECC--CCCEEEEEeCCCCEEE
Confidence 4556788899999998 555543 6899999997765 334444455 3488999999 999888877 789999
Q ss_pred EEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC-cccCCCCCcEEEEec
Q 022870 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK-DDVPAEGPKYMAVAG 168 (291)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g 168 (291)
+|++....... .+. .+...... ........+.. ++|+|+|+ +++ ++
T Consensus 112 v~~~~~~g~~~----~~~-------~~~~~~~~--------------------p~~~~~~~~~~~~~~spdg~-l~v-~~ 158 (347)
T 3hfq_A 112 VMKIAADGALT----LTD-------TVQHSGHG--------------------PRPEQDGSHIHYTDLTPDNR-LAV-ID 158 (347)
T ss_dssp EEEECTTSCEE----EEE-------EEECCCCC--------------------SSTTCSSCCEEEEEECTTSC-EEE-EE
T ss_pred EEEeCCCCCee----ecc-------eeecCCCC--------------------CCccccCCCceEEEECCCCc-EEE-Ee
Confidence 99996432110 000 00000000 00000000000 67999998 554 56
Q ss_pred CCcCeEEEEeCC-CcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCC-CCc--
Q 022870 169 EQLSEVEIWDLN-TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP-GIP-- 244 (291)
Q Consensus 169 ~~d~~i~~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~-~~~-- 244 (291)
..++.|++||+. +++........ .. .......+. |+|+ |+.+++++..++.|++|++... ++.
T Consensus 159 ~~~~~v~~~~~~~~g~~~~~~~~~------~~---~g~~p~~~~-~spd---g~~l~v~~~~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAGQLSEQSVLT------ME---AGFGPRHLV-FSPD---GQYAFLAGELSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEE------CC---TTCCEEEEE-ECTT---SSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred CCCCEEEEEEECCCCcEEEeeeEE------cC---CCCCCceEE-ECCC---CCEEEEEeCCCCEEEEEEecCCCCceEE
Confidence 668899999998 44432211100 11 111234565 9998 5534555678899999998741 221
Q ss_pred eeeccccc------cceeEEEeecCCCee-EEecCCCeEEEEEcCC
Q 022870 245 LTAMKVHL------EPVLCLSIDESCNGG-ISGGADQKIVLYNLDH 283 (291)
Q Consensus 245 ~~~~~~h~------~~v~~~~~~~~~~~l-~s~s~dg~i~vw~~~~ 283 (291)
+..+.... ..+..++|+|+|++| ++...++.|.+|+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 226 LGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred eeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 22222221 358899999999977 5666789999999973
No 149
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.82 E-value=3.1e-18 Score=135.87 Aligned_cols=228 Identities=9% Similarity=0.087 Sum_probs=137.1
Q ss_pred EEEEecCCCeEEEEeCC-CC--eEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC-CeEEEEECC--CCCCCCCCccc
Q 022870 32 ILFAGTTGGELRIWDTV-QH--RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD-GTVKCWDIE--NGGLSSNPSLT 105 (291)
Q Consensus 32 ~l~s~~~dg~v~iwd~~-~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-g~i~iwd~~--~~~~~~~~~~~ 105 (291)
++++++.|+.|++||+. ++ +.+..+ .+. ..+.+++|+| ++++|++++.+ +.|.+|++. +++... +..
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~sp--dg~~l~~~~~~~~~v~~~~~~~~~~~~~~--~~~ 79 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVP--GQVQPMVVSP--DKRYLYVGVRPEFRVLAYRIAPDDGALTF--AAE 79 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECS--SCCCCEEECT--TSSEEEEEETTTTEEEEEEECTTTCCEEE--EEE
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecC--CCCceEEECC--CCCEEEEeecCCCeEEEEEecCCCCceee--ccc
Confidence 44555889999999985 33 233333 233 4489999999 99988888876 999999997 443211 111
Q ss_pred ccc-ceEEEEEeecccCccceeccCCCCceeeecccCc--cccccCCCCCC---cccCCCCCcEEEEecCCcCeEEEEeC
Q 022870 106 IKT-NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE--TVDTDSLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDL 179 (291)
Q Consensus 106 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~g~~d~~i~~wd~ 179 (291)
+.. .......+++................+|++.... ........+.. ++|+|+++.+++ ++..++.|++||+
T Consensus 80 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~-~~~~~~~v~~~d~ 158 (343)
T 1ri6_A 80 SALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWV-PALKQDRICLFTV 158 (343)
T ss_dssp EECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEE-EEGGGTEEEEEEE
T ss_pred cccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEE-ecCCCCEEEEEEe
Confidence 111 1222233333333222233334556677773111 11112222222 899999987765 4435799999999
Q ss_pred CC-cceee----EecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCC-CCc--eeecc--
Q 022870 180 NT-AERCT----RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP-GIP--LTAMK-- 249 (291)
Q Consensus 180 ~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~-~~~--~~~~~-- 249 (291)
.+ ++... .+. .+ ....+..+. |+|+ |+.+++++..++.|++||+... +.. ...+.
T Consensus 159 ~~~~~~~~~~~~~~~--------~~---~~~~~~~~~-~~pd---g~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~ 223 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVT--------TV---EGAGPRHMV-FHPN---EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMM 223 (343)
T ss_dssp CTTSCEEEEEEEEEE--------CS---TTCCEEEEE-ECTT---SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECS
T ss_pred cCCCceeeecccccc--------cC---CCCCcceEE-ECCC---CCEEEEEeCCCCEEEEEEecCCCCcEEEEeecccc
Confidence 87 54432 222 11 122345566 9998 5424456668999999999631 222 12221
Q ss_pred --cc--ccceeEEEeecCCCeeE-EecCCCeEEEEEcC
Q 022870 250 --VH--LEPVLCLSIDESCNGGI-SGGADQKIVLYNLD 282 (291)
Q Consensus 250 --~h--~~~v~~~~~~~~~~~l~-s~s~dg~i~vw~~~ 282 (291)
++ ...+..++|+|++++|+ ++..++.|++|+++
T Consensus 224 ~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 224 PENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp CTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 11 23567899999998776 55679999999998
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.82 E-value=5e-18 Score=131.66 Aligned_cols=183 Identities=8% Similarity=0.038 Sum_probs=125.0
Q ss_pred EecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCC-CCCCCCCccccccceEEE
Q 022870 35 AGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN-GGLSSNPSLTIKTNSYHF 113 (291)
Q Consensus 35 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~ 113 (291)
.++.|++|++||+.+++... +..|.. .|.+++|+| ++++|++++ ++.|++||+.+ ++... ..........
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~-~~~~~~--~v~~~~~sp--dg~~l~~~~-~~~i~~~d~~~~~~~~~--~~~~~~~~~~- 87 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRV-VWQTPE--LFEAPNWSP--DGKYLLLNS-EGLLYRLSLAGDPSPEK--VDTGFATICN- 87 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEE-EEEESS--CCEEEEECT--TSSEEEEEE-TTEEEEEESSSCCSCEE--CCCTTCCCBC-
T ss_pred CCCcceeEEEEeCCCCceee-eccCCc--ceEeeEECC--CCCEEEEEc-CCeEEEEeCCCCCCceE--eccccccccc-
Confidence 45789999999999887664 445664 499999999 999999877 78999999988 64321 1000000000
Q ss_pred EEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCc--CeEEEEeCCCcceeeEeccc
Q 022870 114 CKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL--SEVEIWDLNTAERCTRLHQN 191 (291)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d--~~i~~wd~~~~~~~~~~~~~ 191 (291)
..++|+|+++.++++....+ ..|..||..+++ ...+.
T Consensus 88 --------------------------------------~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~-- 126 (297)
T 2ojh_A 88 --------------------------------------NDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT-- 126 (297)
T ss_dssp --------------------------------------SCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC--
T ss_pred --------------------------------------cceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee--
Confidence 00669999987765442233 445555555544 33333
Q ss_pred ccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEec
Q 022870 192 SCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG 271 (291)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 271 (291)
.+ ..+..+. |+|+ ++.+++++..++.+++|+++........+..|...+.+++|+|++++|+.++
T Consensus 127 ------~~-----~~~~~~~-~spd---g~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 127 ------KN-----LPSYWHG-WSPD---GKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp ------SS-----SSEEEEE-ECTT---SSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred ------cC-----CCccceE-ECCC---CCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEe
Confidence 11 1255565 9998 5534448888999999997543455667777888999999999999887665
Q ss_pred -CCCeEEEEEcC
Q 022870 272 -ADQKIVLYNLD 282 (291)
Q Consensus 272 -~dg~i~vw~~~ 282 (291)
.|+.+++|+++
T Consensus 192 ~~~~~~~i~~~~ 203 (297)
T 2ojh_A 192 SRTGQMQIWRVR 203 (297)
T ss_dssp CTTSSCEEEEEE
T ss_pred cCCCCccEEEEC
Confidence 58999999986
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.82 E-value=2e-18 Score=150.13 Aligned_cols=245 Identities=11% Similarity=-0.014 Sum_probs=153.8
Q ss_pred cceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCC---
Q 022870 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN--- 95 (291)
Q Consensus 19 ~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~--- 95 (291)
..|.+++|+|+ ..++.+ .|+.|++||+.+++.... ..+. ..+.+++|+| +|++|+++ .|+.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l-~~~~--~~~~~~~~Sp--dG~~la~~-~~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYL-FDTN--EETASLDFSP--VGDRVAYV-RNHNLYIARGGKLGE 153 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEE-ECCT--TCCTTCEECT--TSSEEEEE-ETTEEEEEECBCTTS
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEc-cCCc--ccccCCcCCC--CCCEEEEE-ECCeEEEEecCcccc
Confidence 56999999999 555554 359999999988876543 3344 3488999999 99999885 679999999987
Q ss_pred --CCCCCCCccccccce--------------EEEEEeecccCccceecc-------------------------------
Q 022870 96 --GGLSSNPSLTIKTNS--------------YHFCKLSLVKEPYANAKQ------------------------------- 128 (291)
Q Consensus 96 --~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~------------------------------- 128 (291)
++... +....... .....+++..........
T Consensus 154 ~~g~~~~--~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~ 231 (706)
T 2z3z_A 154 GMSRAIA--VTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTP 231 (706)
T ss_dssp CCCCCEE--SCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSC
T ss_pred cCCCcEE--eccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCC
Confidence 65322 11111110 122334443333322221
Q ss_pred -CCCCceeeecccCccccccCC-CCCC----cccCCCCCcEEEEecCC---cCeEEEEeCCCcceeeEecccccCCCCCC
Q 022870 129 -ANEPKDCYEREVGETVDTDSL-CDSK----DDVPAEGPKYMAVAGEQ---LSEVEIWDLNTAERCTRLHQNSCGGSPNF 199 (291)
Q Consensus 129 -~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~g~~---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 199 (291)
......++++........... .+.. ++|+|+|+.+++++... +..|++||+.+++....+... .+
T Consensus 232 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~------~~ 305 (706)
T 2z3z_A 232 SHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVE------TD 305 (706)
T ss_dssp CCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEE------EC
T ss_pred CCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEc------cC
Confidence 112344455554443222211 2322 89999998776533221 138999999998443333210 11
Q ss_pred CCCcceeeeeEEEecC--CCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeE-EEeecCCCeeEEec-CCC-
Q 022870 200 SSKGRGMCMAVQAYLP--SKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLC-LSIDESCNGGISGG-ADQ- 274 (291)
Q Consensus 200 ~~~~~~~~~~~~~~~p--~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~l~s~s-~dg- 274 (291)
.. ....+..+. |+| + |+ +++++..||.+++|++...+..+..+..|...+.+ ++|+|+++.|+.++ .++
T Consensus 306 ~~-~~~~~~~~~-~sp~~d---g~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~ 379 (706)
T 2z3z_A 306 KH-YVEPLHPLT-FLPGSN---NQ-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASP 379 (706)
T ss_dssp SS-CCCCCSCCE-ECTTCS---SE-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCT
T ss_pred CC-eECccCCce-eecCCC---CE-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCC
Confidence 00 011223455 999 7 55 88999999999999887336777888888888877 79999998776544 444
Q ss_pred ---eEEEEEcCCCc
Q 022870 275 ---KIVLYNLDHST 285 (291)
Q Consensus 275 ---~i~vw~~~~~~ 285 (291)
.|..||+++++
T Consensus 380 ~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 380 LERHFYCIDIKGGK 393 (706)
T ss_dssp TCBEEEEEETTCCC
T ss_pred ceEEEEEEEcCCCC
Confidence 67777877765
No 152
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.81 E-value=2e-18 Score=150.50 Aligned_cols=258 Identities=9% Similarity=-0.042 Sum_probs=153.8
Q ss_pred CCceEEecCCcc---ceeEEEEcCCCCEEEEecCC---------CeEEEEeCCCCeEEEEEeeec-CCcceEEEEEeecC
Q 022870 8 PDPVAVLRGHRA---SVTDVCFHQTKPILFAGTTG---------GELRIWDTVQHRTVSSSWVHS-AAHGIVSVATGPSI 74 (291)
Q Consensus 8 ~~~~~~l~~h~~---~v~~l~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~ 74 (291)
++....+.+|.. .|.+++|||||++|++++.+ +.+.+||+.+++. ..+.... ....+..++|+|
T Consensus 47 g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SP-- 123 (723)
T 1xfd_A 47 NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGP-- 123 (723)
T ss_dssp CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCS--
T ss_pred CcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECC--
Confidence 345566666665 49999999999999998764 7889999998876 3333221 112388999999
Q ss_pred CCCeEEEEeCCCeEEEEECCCCCCCCCCccccccce------------------EEEEEeecccCccceeccCC------
Q 022870 75 GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNS------------------YHFCKLSLVKEPYANAKQAN------ 130 (291)
Q Consensus 75 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~------ 130 (291)
||+.|+.++. +.|++||+.+++... +....... .....+++............
T Consensus 124 dG~~la~~~~-~~i~~~~~~~g~~~~--~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~ 200 (723)
T 1xfd_A 124 KGQQLIFIFE-NNIYYCAHVGKQAIR--VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIM 200 (723)
T ss_dssp STTCEEEEET-TEEEEESSSSSCCEE--EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEE
T ss_pred CCCEEEEEEC-CeEEEEECCCCceEE--EecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceE
Confidence 9999999886 799999998875432 11111110 12344444443333222111
Q ss_pred ---------------------------CCceeeecccCccccccCCCC------CC----cccCCCCCcEEEEec--CCc
Q 022870 131 ---------------------------EPKDCYEREVGETVDTDSLCD------SK----DDVPAEGPKYMAVAG--EQL 171 (291)
Q Consensus 131 ---------------------------~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~~~~~~~~g--~~d 171 (291)
....++++...... ..+..+ .. ++|+|||+.++..+. ..+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~-~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 279 (723)
T 1xfd_A 201 ELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHD-LEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNV 279 (723)
T ss_dssp EECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCC-EECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCE
T ss_pred EeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCcee-EEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCe
Confidence 12334454443321 112221 12 899999975543322 235
Q ss_pred CeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEe-ecCCC------cEEEEEccCCCC-
Q 022870 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA-GYEDG------SILVWDIRNPGI- 243 (291)
Q Consensus 172 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~-g~~dg------~i~vwd~~~~~~- 243 (291)
..|++||+.+++....+.. .+..........+. |+|+ |+.+++. +..++ .|++||..+.+.
T Consensus 280 ~~i~~~d~~~g~~~~~~~~-------~~~~~~~~~~~~~~-~spd---g~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 348 (723)
T 1xfd_A 280 SILTLCDATTGVCTKKHED-------ESEAWLHRQNEEPV-FSKD---GRKFFFIRAIPQGGRGKFYHITVSSSQPNSSN 348 (723)
T ss_dssp EEEEEEETTTCCEEEEEEE-------ECSSCCCCCCCCCE-ECTT---SCSEEEEEEECCSSSSCEEEEEEECSSCCSSS
T ss_pred EEEEEEeCCCCcceEEEEe-------ccCCEEeccCCCce-EcCC---CCeEEEEEecccCCCcceeEEEEEeccCCCCc
Confidence 6899999999887665542 11111110012444 9998 4423333 55677 577777323133
Q ss_pred -ceeeccccccceeE-EEeecCCCeeEEecCC---CeEEEEEcCC
Q 022870 244 -PLTAMKVHLEPVLC-LSIDESCNGGISGGAD---QKIVLYNLDH 283 (291)
Q Consensus 244 -~~~~~~~h~~~v~~-~~~~~~~~~l~s~s~d---g~i~vw~~~~ 283 (291)
....+..+...+.. ++|+|+++.|+..+.+ +.+++|+++.
T Consensus 349 ~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 349 DNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp CCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred cceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 14555544444554 6999999998765554 7899999864
No 153
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.81 E-value=7.3e-18 Score=134.77 Aligned_cols=262 Identities=9% Similarity=-0.013 Sum_probs=158.8
Q ss_pred CCceEEecCCccceeEEEEcCCCCEEEEec----------CCCeEEEEeCCCCeEEEEEeeecC----CcceEEEEEeec
Q 022870 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVHSA----AHGIVSVATGPS 73 (291)
Q Consensus 8 ~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~ 73 (291)
.+.+.++..+..+ .++|+|+|++++++. .++.|.+||..+.+.+..+..... ......++++|
T Consensus 41 ~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~sp- 117 (361)
T 2oiz_A 41 GKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTT- 117 (361)
T ss_dssp CCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECT-
T ss_pred CeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECC-
Confidence 3556677766666 899999999998875 367899999999998888775421 02256899999
Q ss_pred CCCCeEEEEeC--CCeEEEEECCCCCCCCCCccc-cccceEEEEEeecccCccceeccCCCCceeeeccc-Cccc-c---
Q 022870 74 IGLNKVISQGR--DGTVKCWDIENGGLSSNPSLT-IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV-GETV-D--- 145 (291)
Q Consensus 74 ~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~--- 145 (291)
+|++|+++.. +++|.+||+.+++... . +.........+.+............+....+.... .+.. .
T Consensus 118 -dg~~l~v~n~~~~~~v~v~d~~~~~~~~----~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~ 192 (361)
T 2oiz_A 118 -DGKFIVLQNASPATSIGIVDVAKGDYVE----DVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRS 192 (361)
T ss_dssp -TSSEEEEEEESSSEEEEEEETTTTEEEE----EEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEEC
T ss_pred -CCCEEEEECCCCCCeEEEEECCCCcEEE----EEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccc
Confidence 9999998864 5899999999886533 2 22211111111222111112222223333333322 1111 0
Q ss_pred -ccCCCCCC---cccCCCCCcEEEEecCCcCeEEEEeCCCccee--eEecccccCCCCCCCCCcceeeeeEEEecCCCCC
Q 022870 146 -TDSLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERC--TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ 219 (291)
Q Consensus 146 -~~~~~~~~---~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 219 (291)
..+..... +.+++++..+++.+ .++.+.++|+...... ..+...... .............+. |+|++
T Consensus 193 ~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~v~v~d~~~~~~~~~~~~~~~~~~--~~~~~~~p~g~~~~a-~~~dg-- 265 (361)
T 2oiz_A 193 KQMFSVKDDPIFIAPALDKDKAHFVS--YYGNVYSADFSGDEVKVDGPWSLLNDE--DKAKNWVPGGYNLVG-LHRAS-- 265 (361)
T ss_dssp CCCSCTTTSCBCSCCEECSSEEEEEB--TTSEEEEEECSSSSCEEEEEEESCCHH--HHHTTCEECCSSCEE-EETTT--
T ss_pred cceEcCCCCceEEEecccCCEEEEEe--CCCeEEEEEecCCCceecccccccCcc--ccccccccCCeeEEE-EecCC--
Confidence 11111111 45667776666533 4689999999765422 222100000 000000000011133 88873
Q ss_pred CceEEEeecC-----------CCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCC--ce
Q 022870 220 GFVNVLAGYE-----------DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS--TV 286 (291)
Q Consensus 220 g~~~l~~g~~-----------dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~--~~ 286 (291)
. .++++.. .+.|.+||+.+ .+.+..+..+. +.+++|+|+|++|++++. +.|.+||.+++ ++
T Consensus 266 -~-~lyv~~~~~~~~~~~~~~~~~v~viD~~t-~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~ 339 (361)
T 2oiz_A 266 -G-RMYVFMHPDGKEGTHKFPAAEIWVMDTKT-KQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKL 339 (361)
T ss_dssp -T-EEEEEEESSCCTTCTTCCCSEEEEEETTT-TEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEE
T ss_pred -C-eEEEEEccCCCcccccCCCceEEEEECCC-CcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCccee
Confidence 3 3443321 35899999998 88888888776 999999999999998886 99999999999 88
Q ss_pred eeee
Q 022870 287 SHCV 290 (291)
Q Consensus 287 ~~~~ 290 (291)
+.++
T Consensus 340 ~~~i 343 (361)
T 2oiz_A 340 LRTI 343 (361)
T ss_dssp EEEE
T ss_pred eEEe
Confidence 8764
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.81 E-value=1.4e-18 Score=157.03 Aligned_cols=242 Identities=9% Similarity=-0.004 Sum_probs=159.9
Q ss_pred ceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeec---------CCcceEEEEEe-ecCCCCeE
Q 022870 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS---------AAHGIVSVATG-PSIGLNKV 79 (291)
Q Consensus 10 ~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---------~~~~v~~~~~~-~~~~~~~l 79 (291)
....+..|. .+...+|+|+|+.|+.+ .++.|.+||+.... +..+..+. ....+.+++|+ | +|.+|
T Consensus 237 ~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p--dG~~l 311 (1045)
T 1k32_A 237 DLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPL--DGDLI 311 (1045)
T ss_dssp SCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEEC--GGGCE
T ss_pred cceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCC--CCCEE
Confidence 445566555 46788999999999887 58999999985443 33444321 01248999999 9 99999
Q ss_pred EEEeCCCeEEEEECCCCCCCCCCccccccc-eEEEEEeecccCccceeccCCCCce-eeecccCccccccCCCCCC----
Q 022870 80 ISQGRDGTVKCWDIENGGLSSNPSLTIKTN-SYHFCKLSLVKEPYANAKQANEPKD-CYEREVGETVDTDSLCDSK---- 153 (291)
Q Consensus 80 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---- 153 (291)
++++ ++.|.+|++.+++... ...... ......++ ......... ...... .++....... .+..+..
T Consensus 312 a~~~-~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~s-dg~~l~~~s-~~~~l~~~~d~~~~~~~--~l~~~~~~~~~ 383 (1045)
T 1k32_A 312 AFVS-RGQAFIQDVSGTYVLK---VPEPLRIRYVRRGGD-TKVAFIHGT-REGDFLGIYDYRTGKAE--KFEENLGNVFA 383 (1045)
T ss_dssp EEEE-TTEEEEECTTSSBEEE---CSCCSCEEEEEECSS-SEEEEEEEE-TTEEEEEEEETTTCCEE--ECCCCCCSEEE
T ss_pred EEEE-cCEEEEEcCCCCceEE---ccCCCcceEEeeeEc-CCCeEEEEE-CCCceEEEEECCCCCce--EecCCccceee
Confidence 9887 7899999998765321 111111 22222222 111111111 111222 3344333222 2223433
Q ss_pred cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCC---
Q 022870 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED--- 230 (291)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d--- 230 (291)
++|+|+|+.++ .++.++.|++||+.+++....+. +|. ..+..+. |+|+ |+ +|++++.+
T Consensus 384 ~~~SpDG~~la--~~~~~~~v~~~d~~tg~~~~~~~--------~~~----~~v~~~~-~SpD---G~-~la~~~~~~~~ 444 (1045)
T 1k32_A 384 MGVDRNGKFAV--VANDRFEIMTVDLETGKPTVIER--------SRE----AMITDFT-ISDN---SR-FIAYGFPLKHG 444 (1045)
T ss_dssp EEECTTSSEEE--EEETTSEEEEEETTTCCEEEEEE--------CSS----SCCCCEE-ECTT---SC-EEEEEEEECSS
T ss_pred eEECCCCCEEE--EECCCCeEEEEECCCCceEEecc--------CCC----CCccceE-ECCC---CC-eEEEEecCccc
Confidence 89999998766 34457899999999988776665 342 3345565 9998 55 77776654
Q ss_pred -------CcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCc
Q 022870 231 -------GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 231 -------g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~ 285 (291)
+.|++||+.+ ++ ...+..|...+..++|+|+|++|+.++.++..++|+.....
T Consensus 445 ~~~~~~~~~i~l~d~~~-g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~ 504 (1045)
T 1k32_A 445 ETDGYVMQAIHVYDMEG-RK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLN 504 (1045)
T ss_dssp TTCSCCEEEEEEEETTT-TE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSC
T ss_pred cccCCCCCeEEEEECCC-Cc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccc
Confidence 4899999987 55 67788888889999999999999999998888888865443
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=3.3e-19 Score=155.37 Aligned_cols=204 Identities=8% Similarity=-0.026 Sum_probs=138.9
Q ss_pred eEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecC-CcceEEEEEeecCCCCeEEEEeC---------CCeEEEE
Q 022870 22 TDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVSVATGPSIGLNKVISQGR---------DGTVKCW 91 (291)
Q Consensus 22 ~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~~~---------dg~i~iw 91 (291)
.+++|+|+|++++++ .|++|++||+.+++....+..+.. ...+.+++|+| ||++|++++. ++.|++|
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~Sp--Dg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSP--DRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECT--TSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECC--CCCeEEEEecCceeEEeecceEEEEE
Confidence 378999999655554 699999999999988776665532 01388999999 9999998876 7899999
Q ss_pred ECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCc
Q 022870 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL 171 (291)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d 171 (291)
|+.+++.... ..+.... . .++|+|||+.++.+ . +
T Consensus 96 d~~~g~~~~~--~~l~~~~--------~---------------------------------~~~~SPDG~~la~~--~-~ 129 (719)
T 1z68_A 96 DLSNGEFVRG--NELPRPI--------Q---------------------------------YLCWSPVGSKLAYV--Y-Q 129 (719)
T ss_dssp ETTTTEECCS--SCCCSSB--------C---------------------------------CEEECSSTTCEEEE--E-T
T ss_pred ECCCCccccc--eecCccc--------c---------------------------------cceECCCCCEEEEE--E-C
Confidence 9998764210 0111000 0 05699999887643 2 6
Q ss_pred CeEEEEeCCCcceeeEecccccCCCCCCCCCcc-------------eeeeeEEEecCCCCCCceEEEeecCCC-------
Q 022870 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGR-------------GMCMAVQAYLPSKSQGFVNVLAGYEDG------- 231 (291)
Q Consensus 172 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~p~~~~g~~~l~~g~~dg------- 231 (291)
+.|++||+.+++....... ++..... ....++. |+|+ |+ .|+.++.|.
T Consensus 130 ~~i~~~~~~~g~~~~l~~~-------~~~~~v~~g~~~~v~~ee~~~~~~~~~-wSPD---G~-~la~~~~d~~~~~~~~ 197 (719)
T 1z68_A 130 NNIYLKQRPGDPPFQITFN-------GRENKIFNGIPDWVYEEEMLATKYALW-WSPN---GK-FLAYAEFNDTDIPVIA 197 (719)
T ss_dssp TEEEEESSTTSCCEECCCC-------CBTTTEEESSCCHHHHHHTTCSSCCEE-ECTT---SS-EEEEEEEECTTSCEEE
T ss_pred CeEEEEeCCCCCcEEEecC-------CCcCCeEcccccceeeeecccCcccEE-ECCC---CC-EEEEEEECCCCCceEE
Confidence 8999999998876543221 2211000 1113565 9998 55 787776542
Q ss_pred ---------------------------cEEEEEccCCCCce--------eeccccccceeEEEeecCCCeeEEecCC---
Q 022870 232 ---------------------------SILVWDIRNPGIPL--------TAMKVHLEPVLCLSIDESCNGGISGGAD--- 273 (291)
Q Consensus 232 ---------------------------~i~vwd~~~~~~~~--------~~~~~h~~~v~~~~~~~~~~~l~s~s~d--- 273 (291)
.|++||+.+ ++.. ..+.+|...+.+++|+||++++++....
T Consensus 198 ~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~ 276 (719)
T 1z68_A 198 YSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY-PAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQN 276 (719)
T ss_dssp EEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC-HHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTT
T ss_pred eeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC-CCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccC
Confidence 788999987 4432 2345688899999999998877774322
Q ss_pred -CeEEEEE----cCCCcee
Q 022870 274 -QKIVLYN----LDHSTVS 287 (291)
Q Consensus 274 -g~i~vw~----~~~~~~~ 287 (291)
..|.+|| +++++..
T Consensus 277 ~~~l~~~d~~~~~~~g~~~ 295 (719)
T 1z68_A 277 VSVLSICDFREDWQTWDCP 295 (719)
T ss_dssp EEEEEEEEECSSSSSEECC
T ss_pred eEEEEEEcccCCCCCCceE
Confidence 3588899 7776543
No 156
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=2.4e-17 Score=133.14 Aligned_cols=219 Identities=11% Similarity=0.029 Sum_probs=145.4
Q ss_pred CCCCCCceEEecCCccceeE-----EEEcCCCCEEEEecC-CC--eEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCC
Q 022870 4 RPPPPDPVAVLRGHRASVTD-----VCFHQTKPILFAGTT-GG--ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG 75 (291)
Q Consensus 4 ~~~~~~~~~~l~~h~~~v~~-----l~~~~~~~~l~s~~~-dg--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 75 (291)
.|..+..+..+..|...... .+|+|||++|+.++. +| .|.+||+.+++.......+.. .+..+.|+| +
T Consensus 16 ~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~--~~~~~~~sp--d 91 (388)
T 3pe7_A 16 DASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD--NTFGGFLSP--D 91 (388)
T ss_dssp CTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCB--CSSSCEECT--T
T ss_pred cCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCC--CccceEEcC--C
Confidence 44556778888888877766 899999999988877 67 488899998887765555543 255778999 9
Q ss_pred CCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcc
Q 022870 76 LNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDD 155 (291)
Q Consensus 76 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (291)
++.|+.++.++.|++||+.+++... +............ ..
T Consensus 92 g~~l~~~~~~~~l~~~d~~~g~~~~--~~~~~~~~~~~~~--------------------------------------~~ 131 (388)
T 3pe7_A 92 DDALFYVKDGRNLMRVDLATLEENV--VYQVPAEWVGYGT--------------------------------------WV 131 (388)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEE--EEECCTTEEEEEE--------------------------------------EE
T ss_pred CCEEEEEeCCCeEEEEECCCCccee--eeechhhcccccc--------------------------------------ee
Confidence 9999999999999999999876422 2222221111110 11
Q ss_pred cCCCCCcEEEE--------------------ecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecC
Q 022870 156 VPAEGPKYMAV--------------------AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP 215 (291)
Q Consensus 156 ~~~~~~~~~~~--------------------~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 215 (291)
++|++..++.. ....+..|.+||+.+++...... + ...+..+. |+|
T Consensus 132 ~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~---------~----~~~~~~~~-~sp 197 (388)
T 3pe7_A 132 ANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ---------E----NQWLGHPI-YRP 197 (388)
T ss_dssp ECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE---------E----SSCEEEEE-EET
T ss_pred ECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec---------C----CccccccE-ECC
Confidence 34555443321 12345789999999887544433 1 22345565 999
Q ss_pred -CCCCCceEEEeecC------CCcEEEEEccCCCCceeeccccc--cceeEEEeecCCCeeEEecCC-----CeEEEEEc
Q 022870 216 -SKSQGFVNVLAGYE------DGSILVWDIRNPGIPLTAMKVHL--EPVLCLSIDESCNGGISGGAD-----QKIVLYNL 281 (291)
Q Consensus 216 -~~~~g~~~l~~g~~------dg~i~vwd~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s~s~d-----g~i~vw~~ 281 (291)
+ |+ .|+.... ...|.++|... + ....+..+. ..+...+|+|+|+.|+..+.+ ..|++||+
T Consensus 198 ~d---g~-~l~~~~~~~~~~~~~~l~~~d~~~-~-~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (388)
T 3pe7_A 198 YD---DS-TVAFCHEGPHDLVDARMWLINEDG-T-NMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADP 271 (388)
T ss_dssp TE---EE-EEEEEECSCTTTSSCSEEEEETTS-C-CCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECT
T ss_pred CC---CC-EEEEEEecCCCCCcceEEEEeCCC-C-ceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEec
Confidence 7 54 5655444 33788888764 3 334444444 367889999999988654432 24999999
Q ss_pred CCCce
Q 022870 282 DHSTV 286 (291)
Q Consensus 282 ~~~~~ 286 (291)
.+++.
T Consensus 272 ~~g~~ 276 (388)
T 3pe7_A 272 ETLEN 276 (388)
T ss_dssp TTCCE
T ss_pred CCCce
Confidence 98874
No 157
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.79 E-value=1.1e-17 Score=151.35 Aligned_cols=238 Identities=11% Similarity=0.084 Sum_probs=161.6
Q ss_pred eEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCC-CeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEE
Q 022870 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~ 89 (291)
...+.+|...+.++.|+++ .++++++.|+.+.||.+.. +.....+..+. .+...+|+| +|+.|+.+. ++.|.
T Consensus 196 ~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~---~~~~~~~Sp--DG~~la~~~-~~~i~ 268 (1045)
T 1k32_A 196 FKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT---DYYPRHLNT--DGRRILFSK-GGSIY 268 (1045)
T ss_dssp EEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC---SSCEEEEEE--SSSCEEEEE-TTEEE
T ss_pred eEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC---CcceeeEcC--CCCEEEEEe-CCEEE
Confidence 4556889999999999998 6778888899999997653 33444555443 266779999 999888874 89999
Q ss_pred EEECCCCCCCCCCccccccc-------------eEEEEEee-cccCccceeccCCCCceeeecccCccccccCCCCCC--
Q 022870 90 CWDIENGGLSSNPSLTIKTN-------------SYHFCKLS-LVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK-- 153 (291)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~-------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 153 (291)
+||+...... .+... ......++ +......... ......++........ +..+..
T Consensus 269 ~~d~~~~~l~-----~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~~~i~~~~~~~~~~~~--~~~~~~~~ 339 (1045)
T 1k32_A 269 IFNPDTEKIE-----KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--RGQAFIQDVSGTYVLK--VPEPLRIR 339 (1045)
T ss_dssp EECTTTCCEE-----ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--TTEEEEECTTSSBEEE--CSCCSCEE
T ss_pred EecCCceEee-----eeccCcccccccccccccccceeeecCCCCCEEEEEE--cCEEEEEcCCCCceEE--ccCCCcce
Confidence 9998443221 11110 12233344 3333222222 2333444444333221 222222
Q ss_pred ---cccCCCCCcEEEEecCCcCeEE-EEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecC
Q 022870 154 ---DDVPAEGPKYMAVAGEQLSEVE-IWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE 229 (291)
Q Consensus 154 ---~~~~~~~~~~~~~~g~~d~~i~-~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~ 229 (291)
++|+ +|+.++. ++. ++.+. +||+..++.. .+. +| ...+..+. |+|+ |+ +|++++.
T Consensus 340 ~~~~~~s-dg~~l~~-~s~-~~~l~~~~d~~~~~~~-~l~--------~~----~~~~~~~~-~SpD---G~-~la~~~~ 398 (1045)
T 1k32_A 340 YVRRGGD-TKVAFIH-GTR-EGDFLGIYDYRTGKAE-KFE--------EN----LGNVFAMG-VDRN---GK-FAVVAND 398 (1045)
T ss_dssp EEEECSS-SEEEEEE-EET-TEEEEEEEETTTCCEE-ECC--------CC----CCSEEEEE-ECTT---SS-EEEEEET
T ss_pred EEeeeEc-CCCeEEE-EEC-CCceEEEEECCCCCce-Eec--------CC----ccceeeeE-ECCC---CC-EEEEECC
Confidence 7899 8876664 333 67888 9999876543 232 22 23456676 9998 55 8999999
Q ss_pred CCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCC----------eEEEEEcCCCce
Q 022870 230 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ----------KIVLYNLDHSTV 286 (291)
Q Consensus 230 dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg----------~i~vw~~~~~~~ 286 (291)
++.|++||+.+ ++....+.+|...+.+++|+|+|++|++++.++ .|++||+.+++.
T Consensus 399 ~~~v~~~d~~t-g~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~ 464 (1045)
T 1k32_A 399 RFEIMTVDLET-GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 464 (1045)
T ss_dssp TSEEEEEETTT-CCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred CCeEEEEECCC-CceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence 99999999998 777777778999999999999999998887654 899999998873
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=1.5e-17 Score=133.35 Aligned_cols=256 Identities=9% Similarity=0.008 Sum_probs=150.6
Q ss_pred ccceeEEEEcCCCCEEEEecCCCeEEEEeCC-CCeEEEEEeeecCCcceEEEEEeecCCCCe--EEEEe-----------
Q 022870 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTV-QHRTVSSSWVHSAAHGIVSVATGPSIGLNK--VISQG----------- 83 (291)
Q Consensus 18 ~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--l~s~~----------- 83 (291)
...+..++|+|+|++|++++.+ .|.+|++. +++.......... ....+++|+| +|++ ++++.
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~sp--dg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADT--NTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTS--CCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECC--CCCEEEEEEecCCcceecccee
Confidence 3468899999999999988887 99999987 7776544332111 1145689999 9884 45553
Q ss_pred --CCCeEEEEECCC-CCCCCCCcccc---ccceEEEEEeecccCccceeccCCCCceeeecc-cCcccc-ccC--CC-CC
Q 022870 84 --RDGTVKCWDIEN-GGLSSNPSLTI---KTNSYHFCKLSLVKEPYANAKQANEPKDCYERE-VGETVD-TDS--LC-DS 152 (291)
Q Consensus 84 --~dg~i~iwd~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~--~~-~~ 152 (291)
.+|++.+|++.. ++... ..... .........+++.................|++. ..+... ... .. ..
T Consensus 115 ~~~~g~v~v~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 115 YKFAGYGNVFSVSETGKLEK-NVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD 193 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEE-EEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC
T ss_pred ecCCceEEEEccCCCCcCcc-eEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC
Confidence 689999999974 43221 01110 122344445555543332222233456667776 333211 111 11 11
Q ss_pred C---cccCCCCCcEEEEecCCcCeEEEEeCC--Ccceee---EecccccCCCCCCCCC--cceeeeeEEE-ecCCCCCCc
Q 022870 153 K---DDVPAEGPKYMAVAGEQLSEVEIWDLN--TAERCT---RLHQNSCGGSPNFSSK--GRGMCMAVQA-YLPSKSQGF 221 (291)
Q Consensus 153 ~---~~~~~~~~~~~~~~g~~d~~i~~wd~~--~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~p~~~~g~ 221 (291)
. ++|+|+|+.+++ ++..++.|.+|++. +++... .+.... ....++... ....+..+ + |+|+ |+
T Consensus 194 ~p~~~~~spdg~~l~v-~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~i-~~~spd---G~ 267 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYA-LMEAGNRICEYVIDPATHMPVYTHHSFPLIP-PGIPDRDPETGKGLYRADV-CALTFS---GK 267 (365)
T ss_dssp CEEEEEECTTSSEEEE-EETTTTEEEEEEECTTTCCEEEEEEEEESSC-TTCCCBCTTTSSBSEEEEE-EEECTT---SS
T ss_pred CCCEeEECCCCCEEEE-EECCCCeEEEEEEeCCCCcEEEccceEEcCC-CCcCCcccccccccccccE-EEECCC---CC
Confidence 2 899999987665 45557899999765 454321 222100 000011000 00023444 6 8998 55
Q ss_pred eEEEeecCC-C-----cEEEEEccCCCCcee---eccccccceeEEEeec---CCCeeEEecCC-CeEEEEEcCCCc
Q 022870 222 VNVLAGYED-G-----SILVWDIRNPGIPLT---AMKVHLEPVLCLSIDE---SCNGGISGGAD-QKIVLYNLDHST 285 (291)
Q Consensus 222 ~~l~~g~~d-g-----~i~vwd~~~~~~~~~---~~~~h~~~v~~~~~~~---~~~~l~s~s~d-g~i~vw~~~~~~ 285 (291)
+|++++.+ . .|.+|++...++... ....+...+..++|+| +|++|++++.+ +.|++|+++...
T Consensus 268 -~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 268 -YMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp -EEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred -EEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhh
Confidence 66655432 2 899999963255433 1333455678899999 89999888764 899999998763
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.79 E-value=3.1e-17 Score=129.75 Aligned_cols=232 Identities=12% Similarity=0.064 Sum_probs=147.1
Q ss_pred CEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeE-EEEeCCCeEEEEECCCCCCCCCCcccccc-
Q 022870 31 PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDGTVKCWDIENGGLSSNPSLTIKT- 108 (291)
Q Consensus 31 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~- 108 (291)
.++++++.++.|.+||+.+++.+..+........+..++|+| +++++ ++++.++.|.+||+.+++... .+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~v~~~~~~~v~~~d~~~~~~~~--~~~~~~~ 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAP--GGRIAYATVNKSESLVKIDLVTGETLG--RIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECT--TSSEEEEEETTTTEEEEEETTTCCEEE--EEECCBT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcC--CCCEEEEEeCCCCeEEEEECCCCCeEe--eEEcCCc
Confidence 478999999999999999999888776443100378999999 88765 456668899999998876533 111111
Q ss_pred c----eEEEEEeecccCccceecc-----------CCCCceeeecccCccccccCCCCCC--cccCCCCCcEEEEecCCc
Q 022870 109 N----SYHFCKLSLVKEPYANAKQ-----------ANEPKDCYEREVGETVDTDSLCDSK--DDVPAEGPKYMAVAGEQL 171 (291)
Q Consensus 109 ~----~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~d 171 (291)
. ......+++.......... .......++............+... ++|+|+++.++++ +
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~----~ 153 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL----G 153 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE----S
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe----C
Confidence 0 1111222222221111110 2345566666554433222122212 8899999877753 4
Q ss_pred CeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCC--------------------
Q 022870 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG-------------------- 231 (291)
Q Consensus 172 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg-------------------- 231 (291)
+.|++||+.+++....+.. +... .. +. |+|+ |..+++++..++
T Consensus 154 ~~i~~~d~~~~~~~~~~~~--------~~~~-~~----~~-~s~d---g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (337)
T 1pby_B 154 RDLHVMDPEAGTLVEDKPI--------QSWE-AE----TY-AQPD---VLAVWNQHESSGVMATPFYTARKDIDPADPTA 216 (337)
T ss_dssp SSEEEEETTTTEEEEEECS--------TTTT-TT----TB-CCCB---CCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGG
T ss_pred CeEEEEECCCCcEeeeeec--------cccC-CC----ce-eCCC---ccEEeeeccCCCceeeeeeccccccccccccc
Confidence 7899999999988777662 1110 11 12 7887 331333333333
Q ss_pred ---cEEEEEccCCCCce-eeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 232 ---SILVWDIRNPGIPL-TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 232 ---~i~vwd~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
.|.+||+.+ ++.. ..+..+...+.+++|+|++++|+++ ++.|++||+++++.+..+
T Consensus 217 ~~~~v~~~d~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~ 276 (337)
T 1pby_B 217 YRTGLLTMDLET-GEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRV 276 (337)
T ss_dssp EEEEEEEEETTT-CCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEE
T ss_pred cccceEEEeCCC-CCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCccee
Confidence 468999998 5443 3345566778899999999998888 799999999998876543
No 160
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.78 E-value=2e-16 Score=125.01 Aligned_cols=248 Identities=10% Similarity=0.035 Sum_probs=157.5
Q ss_pred ccceeEEEEcCCCCEEEEecCC------------------------CeEEEEeCCCCeEEEEEeeecCCcceEEEEEeec
Q 022870 18 RASVTDVCFHQTKPILFAGTTG------------------------GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73 (291)
Q Consensus 18 ~~~v~~l~~~~~~~~l~s~~~d------------------------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 73 (291)
-+.+.+++++|+|+++++...+ ++|.+||..+++.+..+... .......++++|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~p~gia~d~- 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKN-LFYLPHGLSIDT- 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTT-TCSSEEEEEECT-
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCC-ccCCceEEEECC-
Confidence 4679999999999999888777 47999999888887655421 113488999999
Q ss_pred CCCCeEEEEeCCCeEEEEECCCCCCCCCCccccc-----------cceEEEEEeecccCccceecc-CCCCceeeecccC
Q 022870 74 IGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIK-----------TNSYHFCKLSLVKEPYANAKQ-ANEPKDCYEREVG 141 (291)
Q Consensus 74 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 141 (291)
+|+++++...++.|++||....... +..+. ........+.+.......+.. ....+..++....
T Consensus 101 -~g~l~v~d~~~~~v~~~~~~g~~~~---~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~ 176 (329)
T 3fvz_A 101 -DGNYWVTDVALHQVFKLDPHSKEGP---LLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK 176 (329)
T ss_dssp -TSCEEEEETTTTEEEEECTTCSSCC---SEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC
T ss_pred -CCCEEEEECCCCEEEEEeCCCCeEE---EEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC
Confidence 9898888888999999998654211 11111 111222222221111111111 2233334442211
Q ss_pred ccccccCCC--------C---C-CcccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeee
Q 022870 142 ETVDTDSLC--------D---S-KDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMA 209 (291)
Q Consensus 142 ~~~~~~~~~--------~---~-~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (291)
........+ + . .++++|++..+++ +...++.|++||..+++.+..+... .+ ...+..
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v-~d~~~~~I~~~~~~~G~~~~~~~~~------~~----~~~~~~ 245 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCV-ADRENGRIQCFKTDTKEFVREIKHA------SF----GRNVFA 245 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEE-EETTTTEEEEEETTTCCEEEEECCT------TT----TTCEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEE-EECCCCEEEEEECCCCcEEEEEecc------cc----CCCcce
Confidence 111111001 1 1 1899999556665 4556899999999988888877521 12 223455
Q ss_pred EEEecCCC---CCCceEEEeecCCCcEEEEEccCCCCceeec---cccccceeEEEeecCCCeeEEecCCCeEEEEEcCC
Q 022870 210 VQAYLPSK---SQGFVNVLAGYEDGSILVWDIRNPGIPLTAM---KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (291)
Q Consensus 210 ~~~~~p~~---~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~ 283 (291)
+. |+|.. .+|. ..++...+..|++||..+ ++.+..+ .++...+.+|+++++|.++++...++.|++|+++.
T Consensus 246 ~~-~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~-g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 246 IS-YIPGFLFAVNGK-PYFGDQEPVQGFVMNFSS-GEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EE-EETTEEEEEECC-CCTTCSCCCCEEEEETTT-CCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred ee-ecCCEEEEeCCC-EEeccCCCcEEEEEEcCC-CeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 65 88710 0022 233344566999999988 7777776 35667899999999998889999999999999876
Q ss_pred Cc
Q 022870 284 ST 285 (291)
Q Consensus 284 ~~ 285 (291)
..
T Consensus 323 ~~ 324 (329)
T 3fvz_A 323 KM 324 (329)
T ss_dssp CS
T ss_pred cc
Confidence 44
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.75 E-value=1e-17 Score=146.01 Aligned_cols=234 Identities=7% Similarity=-0.038 Sum_probs=141.2
Q ss_pred CceEEecCCcc---ceeEEEEcCCCCEEEEecC---------CCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCC
Q 022870 9 DPVAVLRGHRA---SVTDVCFHQTKPILFAGTT---------GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGL 76 (291)
Q Consensus 9 ~~~~~l~~h~~---~v~~l~~~~~~~~l~s~~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 76 (291)
++...+.+|.. .|.+++|||||++|++++. |+.|++||+.+++.+..... . ..+..++|+| ||
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-~--~~~~~~~~SP--DG 121 (719)
T 1z68_A 47 QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-P--RPIQYLCWSP--VG 121 (719)
T ss_dssp CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-C--SSBCCEEECS--ST
T ss_pred cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-C--cccccceECC--CC
Confidence 44444554544 3999999999999998876 78999999998876211111 1 3388999999 99
Q ss_pred CeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCC-CCCcc
Q 022870 77 NKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC-DSKDD 155 (291)
Q Consensus 77 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 155 (291)
+.|+.+. ++.|++||+.+++... + +...... .++.-...........+ ...++
T Consensus 122 ~~la~~~-~~~i~~~~~~~g~~~~--l-~~~~~~~----------------------~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 122 SKLAYVY-QNNIYLKQRPGDPPFQ--I-TFNGREN----------------------KIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp TCEEEEE-TTEEEEESSTTSCCEE--C-CCCCBTT----------------------TEEESSCCHHHHHHTTCSSCCEE
T ss_pred CEEEEEE-CCeEEEEeCCCCCcEE--E-ecCCCcC----------------------CeEcccccceeeeecccCcccEE
Confidence 9999886 7899999998775421 0 0000000 00000000000000000 01177
Q ss_pred cCCCCCcEEEEecCC--------------------------------cCeEEEEeCCCccee--eEecccccCCCCCCCC
Q 022870 156 VPAEGPKYMAVAGEQ--------------------------------LSEVEIWDLNTAERC--TRLHQNSCGGSPNFSS 201 (291)
Q Consensus 156 ~~~~~~~~~~~~g~~--------------------------------d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~ 201 (291)
|+|||+.++..+... +..|++||+.+++.. ..+... ....
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~------~~~~ 249 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVP------AMIA 249 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCC------HHHH
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCC------ccCC
Confidence 999998776533211 127899999987753 122100 0000
Q ss_pred CcceeeeeEEEecCCCCCCceEEEeecCC----CcEEEEE----ccCCCCceeec----ccccccee-----EEEeecCC
Q 022870 202 KGRGMCMAVQAYLPSKSQGFVNVLAGYED----GSILVWD----IRNPGIPLTAM----KVHLEPVL-----CLSIDESC 264 (291)
Q Consensus 202 ~~~~~~~~~~~~~p~~~~g~~~l~~g~~d----g~i~vwd----~~~~~~~~~~~----~~h~~~v~-----~~~~~~~~ 264 (291)
.....+..+. |+|+ ++ ++++.... ..|++|| ..+ ++....+ .+|...+. .+.|+|+|
T Consensus 250 ~~~~~~~~~~-~SpD---~~-~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 323 (719)
T 1z68_A 250 SSDYYFSWLT-WVTD---ER-VCLQWLKRVQNVSVLSICDFREDWQT-WDCPKTQEHIEESRTGWAGGFFVSTPVFSYDA 323 (719)
T ss_dssp TSCEEEEEEE-ESSS---SE-EEEEEEESSTTEEEEEEEEECSSSSS-EECCGGGEEEEECSSSCSSSSSCCCCEECTTS
T ss_pred CCcceEEEeE-EeCC---Ce-EEEEEeccccCeEEEEEEcccCCCCC-CceEEEEecccccCCceEccccCCccEECCCC
Confidence 1245677787 9998 44 56653322 3588999 766 5555555 46777777 88999999
Q ss_pred CeeEE--ecCCC--eEEEEEcCCCc
Q 022870 265 NGGIS--GGADQ--KIVLYNLDHST 285 (291)
Q Consensus 265 ~~l~s--~s~dg--~i~vw~~~~~~ 285 (291)
+.|+. ...+| .|.+|++.+++
T Consensus 324 ~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 324 ISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp SCEEEEEECTTSCEEEEEESSCSTT
T ss_pred CeEEEEEEccCCceEEEEEECCCCc
Confidence 96544 44555 57777877665
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.74 E-value=2.5e-16 Score=137.56 Aligned_cols=249 Identities=8% Similarity=-0.028 Sum_probs=154.1
Q ss_pred ccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCC-c--ceEEEEEeecCCCCeEEEEeCC---------
Q 022870 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA-H--GIVSVATGPSIGLNKVISQGRD--------- 85 (291)
Q Consensus 18 ~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~--~v~~~~~~~~~~~~~l~s~~~d--------- 85 (291)
.....+++|+|+|.+++++ |++|++||+.++++...+..|... . ....++|+| ||++|+.++.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp--dg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP--DGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECT--TSSEEEEEEEEEECSSSCEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECC--CCCEEEEEECCeeeEEEccc
Confidence 3446789999999988886 899999999999988777766531 1 124488999 99999988876
Q ss_pred CeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCC--------------
Q 022870 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCD-------------- 151 (291)
Q Consensus 86 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 151 (291)
+.+.+||+.+++... + ...........+++.+...... ....+.+++............++
T Consensus 92 ~~~~~~d~~~~~~~~--l-~~~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ 166 (740)
T 4a5s_A 92 ASYDIYDLNKRQLIT--E-ERIPNNTQWVTWSPVGHKLAYV--WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYE 166 (740)
T ss_dssp EEEEEEETTTTEECC--S-SCCCTTEEEEEECSSTTCEEEE--ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHH
T ss_pred eEEEEEECCCCcEEE--c-ccCCCcceeeEECCCCCEEEEE--ECCeEEEEECCCCceEEEcCCCCccceecCccccccc
Confidence 566799999887533 2 2222334555666666554433 22333344443333222111111
Q ss_pred -------CCcccCCCCCcEEEEecC----------------------------------CcCeEEEEeCCC---cc--ee
Q 022870 152 -------SKDDVPAEGPKYMAVAGE----------------------------------QLSEVEIWDLNT---AE--RC 185 (291)
Q Consensus 152 -------~~~~~~~~~~~~~~~~g~----------------------------------~d~~i~~wd~~~---~~--~~ 185 (291)
..+.|||||+.++..+.. ....|++||+.+ ++ ..
T Consensus 167 ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~ 246 (740)
T 4a5s_A 167 EEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATS 246 (740)
T ss_dssp HHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCE
T ss_pred chhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceE
Confidence 116799999877654211 012578888887 63 22
Q ss_pred eEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEee----cCCCcEEEEEccCCCC----c--eeec--ccccc
Q 022870 186 TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG----YEDGSILVWDIRNPGI----P--LTAM--KVHLE 253 (291)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g----~~dg~i~vwd~~~~~~----~--~~~~--~~h~~ 253 (291)
..+... .........+..+. |+|+ |+ .++.. ..+..|++||+.+ ++ + +..+ ..|..
T Consensus 247 ~~l~~~------~~~~~~~~~~~~~~-wspd---g~-~~~~~~~r~~~~~~i~~~d~~t-g~~~~~~~~~~~l~~~~~~~ 314 (740)
T 4a5s_A 247 IQITAP------ASMLIGDHYLCDVT-WATQ---ER-ISLQWLRRIQNYSVMDICDYDE-SSGRWNCLVARQHIEMSTTG 314 (740)
T ss_dssp EEECCC------HHHHTSCEEEEEEE-EEET---TE-EEEEEEESSTTEEEEEEEEEET-TTTEEEECGGGCEEEECSSS
T ss_pred EEecCC------ccCCCCCeEEEEEE-EeCC---Ce-EEEEEeCCCCCEEEEEEEECCC-CccccceeEEEEeeeccCCc
Confidence 233210 00001245677787 9998 55 44433 2344799999998 55 2 2222 45666
Q ss_pred cee-----EEEeecCCCeeE-EecC-C--CeEEEEEcCCCcee
Q 022870 254 PVL-----CLSIDESCNGGI-SGGA-D--QKIVLYNLDHSTVS 287 (291)
Q Consensus 254 ~v~-----~~~~~~~~~~l~-s~s~-d--g~i~vw~~~~~~~~ 287 (291)
.|. ...|+|||+.|+ ..+. + ..|++||+++++..
T Consensus 315 ~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~ 357 (740)
T 4a5s_A 315 WVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT 357 (740)
T ss_dssp CSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE
T ss_pred eEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE
Confidence 655 789999999877 5553 3 46888998876644
No 163
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.73 E-value=1e-15 Score=122.42 Aligned_cols=231 Identities=9% Similarity=0.073 Sum_probs=135.1
Q ss_pred CCCCEEEEec----CCCeEEEEeC--CCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC----CeEEEEECCCC-
Q 022870 28 QTKPILFAGT----TGGELRIWDT--VQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD----GTVKCWDIENG- 96 (291)
Q Consensus 28 ~~~~~l~s~~----~dg~v~iwd~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~- 96 (291)
+...+++.|+ .++.|.+|++ .+++.......+. .....++|+| ++++|++++.+ +.|.+|++...
T Consensus 11 ~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~--~~p~~l~~sp--dg~~l~~~~~~~~~~~~v~~~~~~~~~ 86 (361)
T 3scy_A 11 DSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEV--ANPSYLIPSA--DGKFVYSVNEFSKDQAAVSAFAFDKEK 86 (361)
T ss_dssp GGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEEC--SCCCSEEECT--TSSEEEEEECCSSTTCEEEEEEEETTT
T ss_pred CCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccC--CCCceEEECC--CCCEEEEEEccCCCCCcEEEEEEeCCC
Confidence 3344556663 4678999866 4555433322244 3478899999 99999998886 79999998763
Q ss_pred -CCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCcccccc-----CC-----------CCCC-cccCC
Q 022870 97 -GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTD-----SL-----------CDSK-DDVPA 158 (291)
Q Consensus 97 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----------~~~~-~~~~~ 158 (291)
+... +..........+.+.+.................|++......... .. .|.. ++|+|
T Consensus 87 g~~~~--~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp 164 (361)
T 3scy_A 87 GTLHL--LNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP 164 (361)
T ss_dssp TEEEE--EEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT
T ss_pred CcEEE--eeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC
Confidence 2211 112211111112222222222223334455666766543221110 01 1111 89999
Q ss_pred CCCcEEEEecCCcCeEEEEeCCCcce------e------eEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEe
Q 022870 159 EGPKYMAVAGEQLSEVEIWDLNTAER------C------TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (291)
Q Consensus 159 ~~~~~~~~~g~~d~~i~~wd~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~ 226 (291)
+|+.+++ ++..++.|.+|++..... + ..... . .......+. |+|+ |+ ++++
T Consensus 165 dg~~l~~-~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~-------~----~~~~~~~~~-~spd---g~-~l~v 227 (361)
T 3scy_A 165 DGKYLLA-DDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV-------A----PGSGPRHLI-FNSD---GK-FAYL 227 (361)
T ss_dssp TSSEEEE-EETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC-------C----TTCCEEEEE-ECTT---SS-EEEE
T ss_pred CCCEEEE-EeCCCCEEEEEEEcCCCCcccccceeecccccceec-------C----CCCCCeEEE-EcCC---CC-EEEE
Confidence 9987765 455578999998875432 1 11111 1 112244565 9998 55 5555
Q ss_pred ec-CCCcEEEEEccCCCCc--eeec---cccccceeEEEeecCCCeeEEecC--CCeEEEEEcC
Q 022870 227 GY-EDGSILVWDIRNPGIP--LTAM---KVHLEPVLCLSIDESCNGGISGGA--DQKIVLYNLD 282 (291)
Q Consensus 227 g~-~dg~i~vwd~~~~~~~--~~~~---~~h~~~v~~~~~~~~~~~l~s~s~--dg~i~vw~~~ 282 (291)
++ .++.|.+||+.+ +.. +..+ ..+...+..++|+|+|++|+++.. ++.|.+|+++
T Consensus 228 ~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 228 INEIGGTVIAFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EETTTCEEEEEEEET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred EcCCCCeEEEEEecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 54 789999999986 433 2222 233345689999999998866554 5899999996
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.72 E-value=1.1e-14 Score=112.73 Aligned_cols=241 Identities=8% Similarity=0.070 Sum_probs=146.1
Q ss_pred CCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeec----CCcceEEEEEe-ecCCCCeEEEEeC-CCeEE
Q 022870 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS----AAHGIVSVATG-PSIGLNKVISQGR-DGTVK 89 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~-~~~~~~~l~s~~~-dg~i~ 89 (291)
+|-..+.++++++++.++++...++.|.+||.. ++.+..+.... ....+..+++. + ++.++++... ++.|.
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~--~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRN--SGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETT--TTEEEEEECGGGCEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcC--CCeEEEEcCCCCCEEE
Confidence 455678999999999988888889999999976 66666654311 11247899995 5 6555555533 78999
Q ss_pred EEECCCCCCCCCCcccc-ccceEEEEEeecccCccceec-cCCCCceeeecccCccccccCCCCCC----cccCCCCCcE
Q 022870 90 CWDIENGGLSSNPSLTI-KTNSYHFCKLSLVKEPYANAK-QANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKY 163 (291)
Q Consensus 90 iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 163 (291)
+||. +++... .+.. .........+.... ..... ........++.............+.. ++++++|. +
T Consensus 104 ~~d~-~g~~~~--~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-l 177 (286)
T 1q7f_A 104 IYNQ-YGQFVR--KFGATILQHPRGVTVDNKG--RIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-I 177 (286)
T ss_dssp EECT-TSCEEE--EECTTTCSCEEEEEECTTS--CEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-E
T ss_pred EECC-CCcEEE--EecCccCCCceEEEEeCCC--CEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-E
Confidence 9994 343221 1111 11122222222221 11111 12233344443222111111111111 89999986 4
Q ss_pred EEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCC-cEEEEEccCCC
Q 022870 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG-SILVWDIRNPG 242 (291)
Q Consensus 164 ~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg-~i~vwd~~~~~ 242 (291)
++ +...++.|++||.. ++.+..+... ++ ...+..++ +.|+ |+ ++++...++ .|.+||.. +
T Consensus 178 ~v-~~~~~~~i~~~~~~-g~~~~~~~~~------g~----~~~p~~i~-~d~~---G~-l~v~~~~~~~~i~~~~~~--g 238 (286)
T 1q7f_A 178 FI-SDNRAHCVKVFNYE-GQYLRQIGGE------GI----TNYPIGVG-INSN---GE-ILIADNHNNFNLTIFTQD--G 238 (286)
T ss_dssp EE-EEGGGTEEEEEETT-CCEEEEESCT------TT----SCSEEEEE-ECTT---CC-EEEEECSSSCEEEEECTT--S
T ss_pred EE-EECCCCEEEEEcCC-CCEEEEEccC------Cc----cCCCcEEE-ECCC---CC-EEEEeCCCCEEEEEECCC--C
Confidence 44 44457899999985 4555555410 11 13456676 9887 54 677776675 99999964 6
Q ss_pred Cceeecccccc--ceeEEEeecCCCeeEEecCCCeEEEEEcCCCc
Q 022870 243 IPLTAMKVHLE--PVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 243 ~~~~~~~~h~~--~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~ 285 (291)
+.+..+..+.. .+.+++++|+|+++++ +.|+.|++|++....
T Consensus 239 ~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 239 QLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp CEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred CEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 66666665433 4789999999987777 569999999987643
No 165
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.72 E-value=2e-16 Score=134.65 Aligned_cols=195 Identities=10% Similarity=-0.022 Sum_probs=127.1
Q ss_pred cceEEEEEeecCCCCeEEEEeC-CCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccC---CCCceeeec
Q 022870 63 HGIVSVATGPSIGLNKVISQGR-DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQA---NEPKDCYER 138 (291)
Q Consensus 63 ~~v~~~~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 138 (291)
.+|.+++|+| ||++|++++. ||+++||++.+++... +............+++. ........ .....+|.+
T Consensus 22 ~~~~~~~~~~--DG~~la~~s~~~g~~~lw~~~~g~~~~--lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 22 VEKYSLQGVV--DGDKLLVVGFSEGSVNAYLYDGGETVK--LNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp SCEEEEEEEE--TTTEEEEEEEETTEEEEEEEETTEEEE--CCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEE
T ss_pred cchheeecCC--CCCeEEEEEccCCceeEEEEcCCCcEe--eecccccccccccCCCC--eEEEEeccCCCCcceEEEEE
Confidence 4599999999 9999998877 9999999986654321 11111112222222222 11111111 112234333
Q ss_pred cc--CccccccCCCCCC---cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEe
Q 022870 139 EV--GETVDTDSLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAY 213 (291)
Q Consensus 139 ~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (291)
+. ..... .+..... .+|+|+++.+++++++.++ +.+||+.+++...... .+ . .++. |
T Consensus 96 ~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l~~--------~~-----~--~~~~-~ 157 (582)
T 3o4h_A 96 NTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDR-VALYALDGGGLRELAR--------LP-----G--FGFV-S 157 (582)
T ss_dssp ETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEEEE--------ES-----S--CEEE-E
T ss_pred eccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEeec--------CC-----C--ceEE-E
Confidence 32 21111 1111112 7899999887776776554 5599999887654443 11 1 4555 9
Q ss_pred cCCCCCCceEEEeecCC----CcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCC--eEEEEEcCCCcee
Q 022870 214 LPSKSQGFVNVLAGYED----GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ--KIVLYNLDHSTVS 287 (291)
Q Consensus 214 ~p~~~~g~~~l~~g~~d----g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg--~i~vw~~~~~~~~ 287 (291)
+|+ |+ +|++++.+ +.|++||+.+ ++. ..+..|...+.+++|+|||+.|++++.++ .|++||+++++..
T Consensus 158 spD---G~-~la~~~~~~~~~~~i~~~d~~~-g~~-~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 158 DIR---GD-LIAGLGFFGGGRVSLFTSNLSS-GGL-RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEE---TT-EEEEEEEEETTEEEEEEEETTT-CCC-EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CCC---CC-EEEEEEEcCCCCeEEEEEcCCC-CCc-eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 998 55 78877766 7899999986 443 46778888999999999999999888888 8999999988765
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.71 E-value=2.2e-16 Score=127.79 Aligned_cols=256 Identities=9% Similarity=-0.022 Sum_probs=145.9
Q ss_pred CCCCCCceEEecCCccc-----eeEEEEcCCCCEEEEecC---CCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCC
Q 022870 4 RPPPPDPVAVLRGHRAS-----VTDVCFHQTKPILFAGTT---GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG 75 (291)
Q Consensus 4 ~~~~~~~~~~l~~h~~~-----v~~l~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 75 (291)
.+..++.+..+..+... +..++|+|+|++|+.... +..|.+||+.+++.......+. .....+.|+| +
T Consensus 16 d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~--~~~~~~~~sp--d 91 (396)
T 3c5m_A 16 DSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKG--DNTFGGFIST--D 91 (396)
T ss_dssp CTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSC--BCTTTCEECT--T
T ss_pred cCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCC--CccccceECC--C
Confidence 44555667777766544 788999999999876643 3478899998887654332222 1133478999 9
Q ss_pred CCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEE-EEee--------------cccCcccee----c----cCCCC
Q 022870 76 LNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHF-CKLS--------------LVKEPYANA----K----QANEP 132 (291)
Q Consensus 76 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~--------------~~~~~~~~~----~----~~~~~ 132 (291)
|++|+.++.++.|++||+.+++... +.......... ..+. ....+.... . .....
T Consensus 92 g~~l~~~~~~~~l~~~d~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 92 ERAFFYVKNELNLMKVDLETLEEQV--IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR 169 (396)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEE--EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE
T ss_pred CCEEEEEEcCCcEEEEECCCCCcEE--EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcce
Confidence 9999999999999999998875422 22212111000 0000 111111110 0 11122
Q ss_pred ceeeecccCccccccCCCCCC---cccCC-CCCcEEEEecCCc----CeEEEEeCCCcceeeEecccccCCCCCCCCCcc
Q 022870 133 KDCYEREVGETVDTDSLCDSK---DDVPA-EGPKYMAVAGEQL----SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGR 204 (291)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~g~~d----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (291)
+..+++......... ..... +.|+| ++..+++++.... ..|.+||+..++. ..+. .+. ..
T Consensus 170 l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~--------~~~--~~ 237 (396)
T 3c5m_A 170 LIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIK--------EHA--EG 237 (396)
T ss_dssp EEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESS--------CCC--TT
T ss_pred EEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEee--------ccC--CC
Confidence 333444443321111 11111 78999 7766665443222 4689999876543 2232 110 12
Q ss_pred eeeeeEEEecCCCCCCceEEEeecCC-----CcEEEEEccCCCCceeeccccccceeEEEeec-CCCeeEEec-------
Q 022870 205 GMCMAVQAYLPSKSQGFVNVLAGYED-----GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDE-SCNGGISGG------- 271 (291)
Q Consensus 205 ~~~~~~~~~~p~~~~g~~~l~~g~~d-----g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s------- 271 (291)
..+..+. |+|+ |+ .|+.++.+ +.|++||+.+ ++.... ..... .. +.|+| +++++++++
T Consensus 238 ~~~~~~~-~spd---g~-~l~~~~~~~~~~~~~l~~~d~~~-g~~~~l-~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~ 308 (396)
T 3c5m_A 238 ESCTHEF-WIPD---GS-AMAYVSYFKGQTDRVIYKANPET-LENEEV-MVMPP-CS-HLMSNFDGSLMVGDGCDAPVDV 308 (396)
T ss_dssp EEEEEEE-ECTT---SS-CEEEEEEETTTCCEEEEEECTTT-CCEEEE-EECCS-EE-EEEECSSSSEEEEEECCC----
T ss_pred ccccceE-ECCC---CC-EEEEEecCCCCccceEEEEECCC-CCeEEe-eeCCC-CC-CCccCCCCceEEEecCCcceee
Confidence 2455566 9998 44 55544332 4499999987 543322 21112 23 88999 999888754
Q ss_pred ---------CCCeEEEEEcCCCce
Q 022870 272 ---------ADQKIVLYNLDHSTV 286 (291)
Q Consensus 272 ---------~dg~i~vw~~~~~~~ 286 (291)
.++.|++||+.+++.
T Consensus 309 ~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 309 ADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp ------CCCCCCEEEEEETTTTBC
T ss_pred ccccccccCCCCcEEEEecccCce
Confidence 347899999988764
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=1.8e-15 Score=122.10 Aligned_cols=252 Identities=12% Similarity=-0.022 Sum_probs=145.7
Q ss_pred ceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEE--eecCCCCeEEEE-----
Q 022870 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT--GPSIGLNKVISQ----- 82 (291)
Q Consensus 10 ~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~l~s~----- 82 (291)
......+|...+..++|+|||+.|+.++.++.|++||+.+++.......+... +....| +| ++.+++..
T Consensus 72 ~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~--~~~~~~~~~~--dg~~l~~~~~~~~ 147 (388)
T 3pe7_A 72 ATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEW--VGYGTWVANS--DCTKLVGIEIRRE 147 (388)
T ss_dssp EEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTE--EEEEEEEECT--TSSEEEEEEEEGG
T ss_pred eEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhc--ccccceeECC--CCCeeccccccCc
Confidence 33444556666667899999999999999999999999998877766655432 444444 67 87877642
Q ss_pred -----------------eCCCeEEEEECCCCCCCCCCccccccceEEEEEeec-ccCccceeccCC---CCceeeecccC
Q 022870 83 -----------------GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL-VKEPYANAKQAN---EPKDCYEREVG 141 (291)
Q Consensus 83 -----------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~ 141 (291)
..+..|.+||+.+++... +. ..........+++ ............ ....++.++..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~--l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (388)
T 3pe7_A 148 DWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV--IL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED 224 (388)
T ss_dssp GCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE--EE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT
T ss_pred ccccccccchhhhhhccCCcceEEEEECCCCceEE--ee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC
Confidence 244789999999875421 11 1122233334444 333222222211 12233333222
Q ss_pred ccccccCCCCC---C---cccCCCCCcEEEEecCCc---CeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEE
Q 022870 142 ETVDTDSLCDS---K---DDVPAEGPKYMAVAGEQL---SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQA 212 (291)
Q Consensus 142 ~~~~~~~~~~~---~---~~~~~~~~~~~~~~g~~d---~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (291)
......+..+. . .+|+|+|+.++.++...+ ..|++||+.+++........ ++.. .........
T Consensus 225 ~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~------~~~~-~~~~~~~~~- 296 (388)
T 3pe7_A 225 GTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMP------ACSH-LMSNYDGSL- 296 (388)
T ss_dssp SCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEEC------CEEE-EEECTTSSE-
T ss_pred CCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCC------Ccee-eeecCCCCe-
Confidence 11112222222 1 689999998765443222 24999999988743322210 1000 000011123
Q ss_pred ecCCCCCCceEEEee---------cCCCcEEEEEccCCCCceeecccccc-----------ceeEEEeecCCCeeEEec-
Q 022870 213 YLPSKSQGFVNVLAG---------YEDGSILVWDIRNPGIPLTAMKVHLE-----------PVLCLSIDESCNGGISGG- 271 (291)
Q Consensus 213 ~~p~~~~g~~~l~~g---------~~dg~i~vwd~~~~~~~~~~~~~h~~-----------~v~~~~~~~~~~~l~s~s- 271 (291)
|+|+ |+ .|+.. ..+..|++||+.+ ++ +..+..|.. .+..++|+|+|+.|+..+
T Consensus 297 ~spd---g~-~l~~~~~~~~~~~~~~~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 297 MVGD---GS-DAPVDVQDDSGYKIENDPFLYVFNMKN-GT-QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp EEEE---EC-CC------------CCCCEEEEEETTT-TE-EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred EccC---CC-cceeEeeeccccccCCCCEEEEEeccC-Cc-eEEeccccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence 8888 44 44432 5567999999986 43 455655555 578899999999887655
Q ss_pred CCCeEEEEEcC
Q 022870 272 ADQKIVLYNLD 282 (291)
Q Consensus 272 ~dg~i~vw~~~ 282 (291)
.+|...+|.++
T Consensus 371 ~~g~~~l~~~~ 381 (388)
T 3pe7_A 371 VHGKPALYLAT 381 (388)
T ss_dssp TTSSCEEEEEE
T ss_pred CCCceeEEEEE
Confidence 46777777554
No 168
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.70 E-value=5.6e-14 Score=111.07 Aligned_cols=214 Identities=9% Similarity=0.026 Sum_probs=138.7
Q ss_pred ceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC----
Q 022870 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD---- 85 (291)
Q Consensus 10 ~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d---- 85 (291)
....+.++...+.+++|+++|++++++..++.|.+||.++++.......+. ..+.+++++| +++++++...+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~i~~~~--dg~l~v~~~~~~~~~ 111 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK--ANPAAIKIHK--DGRLFVCYLGDFKST 111 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSS--SSEEEEEECT--TSCEEEEECTTSSSC
T ss_pred eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC--CCcceEEECC--CCcEEEEeCCCCCCC
Confidence 345566677778999999999988888899999999998877655443333 4499999999 88877777666
Q ss_pred CeEEEEECCCCCCCCCCccc-cccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEE
Q 022870 86 GTVKCWDIENGGLSSNPSLT-IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (291)
Q Consensus 86 g~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
+.|.+||.+++.... ... ......... ++++|+|.. +
T Consensus 112 ~~i~~~d~~~~~~~~--~~~~~~~~~~~~~---------------------------------------i~~d~~g~l-~ 149 (333)
T 2dg1_A 112 GGIFAATENGDNLQD--IIEDLSTAYCIDD---------------------------------------MVFDSKGGF-Y 149 (333)
T ss_dssp CEEEEECTTSCSCEE--EECSSSSCCCEEE---------------------------------------EEECTTSCE-E
T ss_pred ceEEEEeCCCCEEEE--EEccCccCCcccc---------------------------------------eEECCCCCE-E
Confidence 689999988765321 000 000000000 558888854 4
Q ss_pred EEecC-----CcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEcc
Q 022870 165 AVAGE-----QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 239 (291)
Q Consensus 165 ~~~g~-----~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~ 239 (291)
+++.. ..+.|..+|..+++...... . ......+. |+|+ |+.++++...++.|++||+.
T Consensus 150 v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--------~-----~~~~~~i~-~~~d---g~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 150 FTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--------N-----ISVANGIA-LSTD---EKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp EEECCCBTTBCCEEEEEECTTSCCEEEEEE--------E-----ESSEEEEE-ECTT---SSEEEEEEGGGTEEEEEEEC
T ss_pred EEeccccccCCCceEEEEeCCCCEEEEeec--------C-----CCcccceE-ECCC---CCEEEEEeCCCCeEEEEEec
Confidence 33321 13567777776554332222 0 11245565 9998 44244555668899999996
Q ss_pred CCCCceee--------ccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceee
Q 022870 240 NPGIPLTA--------MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 240 ~~~~~~~~--------~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
+.+..+.. +.++ ..+..++++++|+++++...++.|.+||.+ ++.+.
T Consensus 213 ~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~ 267 (333)
T 2dg1_A 213 DDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIG 267 (333)
T ss_dssp TTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEE
T ss_pred CCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEE
Confidence 42333321 1222 467889999999988888778999999985 44443
No 169
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.70 E-value=7.6e-15 Score=127.70 Aligned_cols=213 Identities=8% Similarity=0.014 Sum_probs=137.0
Q ss_pred CCccceeEEEEcCCCCEEEEecCCC-----eEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCe---
Q 022870 16 GHRASVTDVCFHQTKPILFAGTTGG-----ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT--- 87 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~--- 87 (291)
+|...+..++|||||++||.+..++ +|++||+.+++.+.....+ ..+..++|+| ||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~---~~~~~~~wsp--Dg~~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER---VKFSCMAWTH--DGKGMFYNAYPQQDGK 196 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE---ECSCCEEECT--TSSEEEEEECCCCSSC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC---cccceEEEEe--CCCEEEEEEECCcccc
Confidence 3555788999999999998765433 8999999999877643322 1267899999 9999998887766
Q ss_pred -------------EEEEECCCCCCCCCCccccccceE-EEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC
Q 022870 88 -------------VKCWDIENGGLSSNPSLTIKTNSY-HFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK 153 (291)
Q Consensus 88 -------------i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (291)
|++|++.+++.....+........ ...
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~--------------------------------------- 237 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGG--------------------------------------- 237 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE---------------------------------------
T ss_pred ccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEE---------------------------------------
Confidence 999998776421101111110000 000
Q ss_pred cccCCCCCcEEEEecCC---cCeEEEEeCCC------cc-eeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceE
Q 022870 154 DDVPAEGPKYMAVAGEQ---LSEVEIWDLNT------AE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVN 223 (291)
Q Consensus 154 ~~~~~~~~~~~~~~g~~---d~~i~~wd~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~ 223 (291)
++|+|+|+.+++.+... +..|++||+.+ +. ....+. .+.... .. .|+|+ |..+
T Consensus 238 ~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~--------~~~~~~----~~--~~s~d---g~~l 300 (710)
T 2xdw_A 238 AELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI--------DNFEGE----YD--YVTNE---GTVF 300 (710)
T ss_dssp EEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE--------CSSSSC----EE--EEEEE---TTEE
T ss_pred EEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee--------CCCCcE----EE--EEecc---CCEE
Confidence 45999999887655322 56899999986 43 344454 232211 11 27776 4424
Q ss_pred EEeecC---CCcEEEEEccCCCC-ceeecccccc--ceeEEEeecCCCeeEEecCCCe--EEEEEcCCCceeee
Q 022870 224 VLAGYE---DGSILVWDIRNPGI-PLTAMKVHLE--PVLCLSIDESCNGGISGGADQK--IVLYNLDHSTVSHC 289 (291)
Q Consensus 224 l~~g~~---dg~i~vwd~~~~~~-~~~~~~~h~~--~v~~~~~~~~~~~l~s~s~dg~--i~vw~~~~~~~~~~ 289 (291)
++.+.. ++.|.+||+.++.. ....+..|.. .+.+++|++++.++++...|+. |.+|++.+++.++.
T Consensus 301 ~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~ 374 (710)
T 2xdw_A 301 TFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKI 374 (710)
T ss_dssp EEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEE
T ss_pred EEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEe
Confidence 444433 34799999987321 2345555544 6888999988888888888885 56677766765544
No 170
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.69 E-value=3.5e-14 Score=110.36 Aligned_cols=243 Identities=8% Similarity=-0.048 Sum_probs=152.2
Q ss_pred CceEEecCCccceeEEEEcCCCC-EEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCe
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (291)
..+..+..+.....+++|+|+++ +++++..++.|..||..++ ...+..+.. .+.++++++ +|+++++...++.
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~--~~~~l~~~~--dg~l~v~~~~~~~ 91 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSH--HQNGHCLNK--QGHLIACSHGLRR 91 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCS--SEEEEEECT--TCCEEEEETTTTE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCC--CcceeeECC--CCcEEEEecCCCe
Confidence 44566666777789999999998 7888889999999998876 555555553 489999999 8888777777789
Q ss_pred EEEEECCCCCCCCCCccccccce----EEEEEeecccCccceecc----------------CCCCceeeecccCcccccc
Q 022870 88 VKCWDIENGGLSSNPSLTIKTNS----YHFCKLSLVKEPYANAKQ----------------ANEPKDCYEREVGETVDTD 147 (291)
Q Consensus 88 i~iwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 147 (291)
|.+||..+++... ........ .....+... ....... ......++.+.........
T Consensus 92 i~~~d~~~g~~~~--~~~~~~~~~~~~~~~i~~d~~--G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~ 167 (296)
T 3e5z_A 92 LERQREPGGEWES--IADSFEGKKLNSPNDVCLAPD--GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAP 167 (296)
T ss_dssp EEEECSTTCCEEE--EECEETTEECCCCCCEEECTT--SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEE
T ss_pred EEEEcCCCCcEEE--EeeccCCCCCCCCCCEEECCC--CCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEe
Confidence 9999997765321 11100000 001111111 1111110 0012244444432211111
Q ss_pred CCCCCC---cccCCCCCcEEEEecCCcCeEEEEeCC-Ccce---eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCC
Q 022870 148 SLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDLN-TAER---CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQG 220 (291)
Q Consensus 148 ~~~~~~---~~~~~~~~~~~~~~g~~d~~i~~wd~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g 220 (291)
...... ++|+|+++.+ + +.+.++.|.+||+. +++. ...+. .+ ...+..+. +.++ |
T Consensus 168 ~~~~~~~~gi~~s~dg~~l-v-~~~~~~~i~~~~~~~~g~~~~~~~~~~--------~~----~~~p~~i~-~d~~---G 229 (296)
T 3e5z_A 168 IRDRVKPNGLAFLPSGNLL-V-SDTGDNATHRYCLNARGETEYQGVHFT--------VE----PGKTDGLR-VDAG---G 229 (296)
T ss_dssp ECCCSSEEEEEECTTSCEE-E-EETTTTEEEEEEECSSSCEEEEEEEEC--------CS----SSCCCSEE-EBTT---S
T ss_pred ecCCCCCccEEECCCCCEE-E-EeCCCCeEEEEEECCCCcCcCCCeEee--------CC----CCCCCeEE-ECCC---C
Confidence 111111 8999999876 4 56667899999987 4443 22221 11 22334455 8887 5
Q ss_pred ceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEe-ecCCCeeEEecCCCeEEEEEcCCCce
Q 022870 221 FVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSI-DESCNGGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 221 ~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~l~s~s~dg~i~vw~~~~~~~ 286 (291)
+ ++++. ++.|.+||.. ++.+..+..+.. +++++| +++++.|+.++.++ +.-++.++.++
T Consensus 230 ~-l~v~~--~~~v~~~~~~--g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 230 L-IWASA--GDGVHVLTPD--GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL 289 (296)
T ss_dssp C-EEEEE--TTEEEEECTT--SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred C-EEEEc--CCeEEEECCC--CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence 4 44444 7899999986 677777877777 999999 58888888887664 55666666654
No 171
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.69 E-value=1.7e-15 Score=120.41 Aligned_cols=212 Identities=9% Similarity=0.017 Sum_probs=130.6
Q ss_pred CceEEecCCc-cceeEEEEcCCCCEE-EEecCCCeEEEEeCCCCeEEEEEeeecC----CcceEEEEEeecCCCCeEEEE
Q 022870 9 DPVAVLRGHR-ASVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSA----AHGIVSVATGPSIGLNKVISQ 82 (291)
Q Consensus 9 ~~~~~l~~h~-~~v~~l~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~s~ 82 (291)
+.+.++..+. ..+..++|+|+++++ +++..++.|.+||+.+++.+..+..... ...+..++|+| +|++|+++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~sp--dg~~l~~~ 109 (349)
T 1jmx_B 32 TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISP--DGKEVYAT 109 (349)
T ss_dssp EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECT--TSSEEEEE
T ss_pred cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECC--CCCEEEEE
Confidence 4455555433 257899999999865 5666789999999999988877764321 12378899999 99999988
Q ss_pred eCC------------CeEEEEECCCCCCCCCCccccccc-eEEEEEeecccCccceeccCCCCceeeecccCccccccCC
Q 022870 83 GRD------------GTVKCWDIENGGLSSNPSLTIKTN-SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSL 149 (291)
Q Consensus 83 ~~d------------g~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (291)
+.+ +.|.+||+.+++.... ....... ......+++... ....+.....++............
T Consensus 110 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~----l~~~~~~i~~~d~~~~~~~~~~~~ 184 (349)
T 1jmx_B 110 VNPTQRLNDHYVVKPPRLEVFSTADGLEAKP-VRTFPMPRQVYLMRAADDGS----LYVAGPDIYKMDVKTGKYTVALPL 184 (349)
T ss_dssp EEEEEECSSCEEECCCEEEEEEGGGGGGBCC-SEEEECCSSCCCEEECTTSC----EEEESSSEEEECTTTCCEEEEECS
T ss_pred cccccccccccccCCCeEEEEECCCccccce-eeeccCCCcccceeECCCCc----EEEccCcEEEEeCCCCceeccccc
Confidence 865 8999999987543221 1111110 111111222221 111122233444333221111000
Q ss_pred C---------------------------------------------------------------------CCC--cccCC
Q 022870 150 C---------------------------------------------------------------------DSK--DDVPA 158 (291)
Q Consensus 150 ~---------------------------------------------------------------------~~~--~~~~~ 158 (291)
. ... ++|+|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 264 (349)
T 1jmx_B 185 RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSP 264 (349)
T ss_dssp TTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECS
T ss_pred cccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecC
Confidence 0 000 46678
Q ss_pred -CCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEE
Q 022870 159 -EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (291)
Q Consensus 159 -~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (291)
+++.+++ + ++.|.+||+.+++.+..+.. ++ .+..+. |+|+ |+ +|++++.++.|++||
T Consensus 265 ~dg~~l~~-~---~~~v~~~d~~~~~~~~~~~~-------~~------~~~~~~-~s~d---g~-~l~~~~~~~~v~v~d 322 (349)
T 1jmx_B 265 KDPNQIYG-V---LNRLAKYDLKQRKLIKAANL-------DH------TYYCVA-FDKK---GD-KLYLGGTFNDLAVFN 322 (349)
T ss_dssp SCTTEEEE-E---ESEEEEEETTTTEEEEEEEC-------SS------CCCEEE-ECSS---SS-CEEEESBSSEEEEEE
T ss_pred CCCCEEEE-E---cCeEEEEECccCeEEEEEcC-------CC------CccceE-ECCC---CC-EEEEecCCCeEEEEe
Confidence 8876654 3 68999999999988777762 11 234565 9998 44 666778889999999
Q ss_pred ccCCCCceeeccc
Q 022870 238 IRNPGIPLTAMKV 250 (291)
Q Consensus 238 ~~~~~~~~~~~~~ 250 (291)
+++ ++.+..+..
T Consensus 323 ~~~-~~~~~~~~~ 334 (349)
T 1jmx_B 323 PDT-LEKVKNIKL 334 (349)
T ss_dssp TTT-TEEEEEEEC
T ss_pred ccc-cceeeeeec
Confidence 988 676666654
No 172
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.67 E-value=1.8e-13 Score=108.00 Aligned_cols=238 Identities=6% Similarity=-0.105 Sum_probs=147.6
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEe-CCCeEEEEECCCCCC
Q 022870 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG-RDGTVKCWDIENGGL 98 (291)
Q Consensus 20 ~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~ 98 (291)
....+.+.. +.+.++...++.|.+||..+++.+.++... .....+++++ ++ .++.+. .++.|.+||..+++.
T Consensus 45 ~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~~---~~p~~i~~~~--~g-~lyv~~~~~~~v~~iD~~t~~~ 117 (328)
T 3dsm_A 45 VAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITGF---TSPRYIHFLS--DE-KAYVTQIWDYRIFIINPKTYEI 117 (328)
T ss_dssp CEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEECC---SSEEEEEEEE--TT-EEEEEEBSCSEEEEEETTTTEE
T ss_pred cceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCCC---CCCcEEEEeC--CC-eEEEEECCCCeEEEEECCCCeE
Confidence 356677743 445566666899999999999998888543 3378999999 86 455444 889999999998765
Q ss_pred CCCCcccccc------ceEEEEEeecccCccceecc-CCCCceeeecccCccccccCCCCC--CcccCCCCCcEEEEecC
Q 022870 99 SSNPSLTIKT------NSYHFCKLSLVKEPYANAKQ-ANEPKDCYEREVGETVDTDSLCDS--KDDVPAEGPKYMAVAGE 169 (291)
Q Consensus 99 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~ 169 (291)
.. ...... .+.. ..+ .......... ....+..++............+.. .++++|+|+ +++++..
T Consensus 118 ~~--~i~~g~~~~~~~~p~~-i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~ 191 (328)
T 3dsm_A 118 TG--YIECPDMDMESGSTEQ-MVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNK-MWTITDG 191 (328)
T ss_dssp EE--EEECTTCCTTTCBCCC-EEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSE-EEEEBCC
T ss_pred EE--EEEcCCccccCCCcce-EEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCC-EEEEECC
Confidence 32 111111 1111 111 1111111111 134455566655543332222222 288999986 4443322
Q ss_pred C---------cCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccC
Q 022870 170 Q---------LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (291)
Q Consensus 170 ~---------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~ 240 (291)
. .+.|.++|..+++....+... .......++ |+|+ ++ .|+++.. .|.+||..+
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~-----------~g~~p~~la-~~~d---~~-~lyv~~~--~v~~~d~~t 253 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEKQFKFK-----------LGDWPSEVQ-LNGT---RD-TLYWINN--DIWRMPVEA 253 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEEEEECC-----------TTCCCEEEE-ECTT---SC-EEEEESS--SEEEEETTC
T ss_pred CccCCccccCCceEEEEECCCCeEEEEEecC-----------CCCCceeEE-EecC---CC-EEEEEcc--EEEEEECCC
Confidence 1 278999999998877666521 012345665 9997 33 5655544 899999987
Q ss_pred CCCcee-e-ccccccceeEEEeec-CCCeeEEe----cCCCeEEEEEcCCCceeeee
Q 022870 241 PGIPLT-A-MKVHLEPVLCLSIDE-SCNGGISG----GADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 241 ~~~~~~-~-~~~h~~~v~~~~~~~-~~~~l~s~----s~dg~i~vw~~~~~~~~~~~ 290 (291)
++... . +..+.....+++++| ++.++++. ..++.|.+||.+ ++++.++
T Consensus 254 -~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 254 -DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp -SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred -CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 54432 1 222246789999998 66666666 678999999998 8877664
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.66 E-value=1.9e-14 Score=124.26 Aligned_cols=251 Identities=9% Similarity=-0.000 Sum_probs=151.6
Q ss_pred eEEecCCccceeEEEEcCCCCEEEEe--cCCCeEEEEeCCCCeEEEEEeeecCCcceE---------EEEEe--ecCCCC
Q 022870 11 VAVLRGHRASVTDVCFHQTKPILFAG--TTGGELRIWDTVQHRTVSSSWVHSAAHGIV---------SVATG--PSIGLN 77 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~~l~s~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~~ 77 (291)
...+.+|...+..++|++++.++++. +.++...||....+.....+..+... +. ...|+ | ||+
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~SP--Dg~ 91 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWN--VRNRVFEYSGFPWAGVPRP--AGG 91 (662)
T ss_dssp HHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCC--BCCCGGGTCCCCEEEECCS--SSS
T ss_pred HHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCcc--ccccccccCCccceeeeec--CCC
Confidence 34577899999999999987777777 66889999996544445556555432 55 56666 8 888
Q ss_pred e-EEEEeC-CCeEEEEECC--C-CCCCCCCcccc----ccceEEEEEeecccCccceeccC-------C--CCceeeecc
Q 022870 78 K-VISQGR-DGTVKCWDIE--N-GGLSSNPSLTI----KTNSYHFCKLSLVKEPYANAKQA-------N--EPKDCYERE 139 (291)
Q Consensus 78 ~-l~s~~~-dg~i~iwd~~--~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~ 139 (291)
. |+.++. +..|.+|++. + ++... +... .........+++........... . ..+..+++.
T Consensus 92 ~~la~~~~~~~~l~~~~~~~~g~~~~~~--l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 169 (662)
T 3azo_A 92 PLLVFTHFGDQRLYAFEPDAPGGAVPRP--LTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLD 169 (662)
T ss_dssp CEEEEEBTTTCCEEEECTTSTTCCCCEE--CSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETT
T ss_pred eEEEEEECCCCeEEEEcCCCCCCCCCEe--ccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECC
Confidence 8 665543 5667777765 2 33211 1111 12233445555555444333322 1 233344554
Q ss_pred cCc----cccccCC-CCCC----cccCCCCCcEEEEecCC------cCeEEEEeCC-Ccc--eeeEecccccCCCCCCCC
Q 022870 140 VGE----TVDTDSL-CDSK----DDVPAEGPKYMAVAGEQ------LSEVEIWDLN-TAE--RCTRLHQNSCGGSPNFSS 201 (291)
Q Consensus 140 ~~~----~~~~~~~-~~~~----~~~~~~~~~~~~~~g~~------d~~i~~wd~~-~~~--~~~~~~~~~~~~~~~~~~ 201 (291)
... .....+. .+.. ++|+|||+.++.++... ...|++||+. +++ ....+.. ++
T Consensus 170 ~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~-------~~-- 240 (662)
T 3azo_A 170 GSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG-------GP-- 240 (662)
T ss_dssp STTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE-------ET--
T ss_pred CCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC-------CC--
Confidence 410 1112222 2222 88999998876544332 1479999998 561 2333331 22
Q ss_pred CcceeeeeEEEecCCCCCCceEEEeecCCC--cEEEEEccCCCCceeeccccccc--------eeEEEeecCCCeeEEec
Q 022870 202 KGRGMCMAVQAYLPSKSQGFVNVLAGYEDG--SILVWDIRNPGIPLTAMKVHLEP--------VLCLSIDESCNGGISGG 271 (291)
Q Consensus 202 ~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg--~i~vwd~~~~~~~~~~~~~h~~~--------v~~~~~~~~~~~l~s~s 271 (291)
...+..+. |+|+ |+ +++++..++ .|++||+.+ ++.......+... +..++|++++.++++++
T Consensus 241 --~~~~~~~~-~spd---g~-l~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~ 312 (662)
T 3azo_A 241 --EEAIAQAE-WAPD---GS-LIVATDRTGWWNLHRVDPAT-GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG 312 (662)
T ss_dssp --TBCEEEEE-ECTT---SC-EEEEECTTSSCEEEEECTTT-CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB
T ss_pred --CceEcceE-ECCC---Ce-EEEEECCCCCeEEEEEECCC-CceeecccccccccCccccccCceEeEeCCCEEEEEEE
Confidence 23456666 9998 55 788888888 666677655 5444333333222 56788899999999999
Q ss_pred CCCeEEEE--EcCCCc
Q 022870 272 ADQKIVLY--NLDHST 285 (291)
Q Consensus 272 ~dg~i~vw--~~~~~~ 285 (291)
. +.+++| |+++++
T Consensus 313 ~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 313 K-GAAVLGILDPESGE 327 (662)
T ss_dssp S-SSCEEEEEETTTTE
T ss_pred c-CccEEEEEECCCCc
Confidence 8 999999 555554
No 174
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.66 E-value=7.2e-14 Score=117.38 Aligned_cols=207 Identities=14% Similarity=-0.002 Sum_probs=142.6
Q ss_pred CCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECC--CCCCCCCCccc
Q 022870 28 QTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE--NGGLSSNPSLT 105 (291)
Q Consensus 28 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~ 105 (291)
+.+.++++...+++|.++|..+++.+..+.... .+..+.|+| ||+++++++.|+.|.+||+. +.+.. .+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~---~p~~v~~Sp--DGr~lyv~~~dg~V~viD~~~~t~~~v----~~ 235 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY---AVHISRLSA--SGRYLFVIGRDGKVNMIDLWMKEPTTV----AE 235 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS---CEEEEEECT--TSCEEEEEETTSEEEEEETTSSSCCEE----EE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC---CccceEECC--CCCEEEEEcCCCeEEEEECCCCCCcEe----EE
Confidence 445577788889999999999999998887543 378999999 99999999999999999996 44332 12
Q ss_pred cccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccC----CCCCcEEEEecCCcCeEEEEeCCC
Q 022870 106 IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVP----AEGPKYMAVAGEQLSEVEIWDLNT 181 (291)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~d~~i~~wd~~~ 181 (291)
+........ ++|+ |+|+++++ +...++.+.++|..+
T Consensus 236 i~~G~~P~~---------------------------------------ia~s~~~~pDGk~l~v-~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 236 IKIGSEARS---------------------------------------IETSKMEGWEDKYAIA-GAYWPPQYVIMDGET 275 (567)
T ss_dssp EECCSEEEE---------------------------------------EEECCSTTCTTTEEEE-EEEETTEEEEEETTT
T ss_pred EecCCCCce---------------------------------------eEEccccCCCCCEEEE-EEccCCeEEEEECCC
Confidence 222111111 5688 69987766 566689999999999
Q ss_pred cceeeEecccccCC--CCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEE
Q 022870 182 AERCTRLHQNSCGG--SPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLS 259 (291)
Q Consensus 182 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~ 259 (291)
.+.+..+....... ...|. ...+..+. +++++ ..+++....+|.|.++|..+.......-.........+.
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p---~~rva~i~-~s~~~---~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~ 348 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHP---EPRVAAIL-ASHYR---PEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGG 348 (567)
T ss_dssp CCEEEEEECCEECTTTCCEES---CCCEEEEE-ECSSS---SEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEE
T ss_pred CcEEEEEeccccccccccccC---CCceEEEE-EcCCC---CEEEEEecCCCeEEEEecCCCccceeeeeeccccccCce
Confidence 99888776310000 00011 11344454 67763 337777788899999999863222111112344577889
Q ss_pred eecCCCeeEEec-CCCeEEEEEcCCCceeeee
Q 022870 260 IDESCNGGISGG-ADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 260 ~~~~~~~l~s~s-~dg~i~vw~~~~~~~~~~~ 290 (291)
|+|++++++++. .++.|.++|+.+++++..+
T Consensus 349 ~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i 380 (567)
T 1qks_A 349 LDGSHRYFITAANARNKLVVIDTKEGKLVAIE 380 (567)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEEeCCCCeEEEEECCCCcEEEEE
Confidence 999999876554 6789999999999887553
No 175
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.65 E-value=5.9e-14 Score=107.74 Aligned_cols=196 Identities=12% Similarity=0.095 Sum_probs=138.7
Q ss_pred CCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCcccccc
Q 022870 29 TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKT 108 (291)
Q Consensus 29 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 108 (291)
.+++|++++.|+.|.+||.++++.+..+..+.. ..+.++.+.| +|++++ +.++.|..||. +++.+. ....
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~p--dG~ilv--s~~~~V~~~d~-~G~~~W----~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKG-WECNSVAATK--AGEILF--SYSKGAKMITR-DGRELW----NIAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTT-CCCCEEEECT--TSCEEE--ECBSEEEEECT-TSCEEE----EEEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECC--CCCEEE--eCCCCEEEECC-CCCEEE----EEcC
Confidence 456899999999999999989999999887642 2388999999 988888 44678999998 666543 2221
Q ss_pred c--eEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcceee
Q 022870 109 N--SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCT 186 (291)
Q Consensus 109 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~ 186 (291)
. ..... ..+.++|..+++.++ .++.+..+|. +++.+.
T Consensus 74 ~~~~~~~~---------------------------------------~~~~~dG~~lv~~~~-~~~~v~~vd~-~Gk~l~ 112 (276)
T 3no2_A 74 PAGCEMQT---------------------------------------ARILPDGNALVAWCG-HPSTILEVNM-KGEVLS 112 (276)
T ss_dssp CTTCEEEE---------------------------------------EEECTTSCEEEEEES-TTEEEEEECT-TSCEEE
T ss_pred CCCccccc---------------------------------------cEECCCCCEEEEecC-CCCEEEEEeC-CCCEEE
Confidence 1 00000 337788876664333 2577888886 677776
Q ss_pred EecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCe
Q 022870 187 RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG 266 (291)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 266 (291)
++.... .. .........+. +.++ |. ++++...++.|..||.. ++.+.++..+ ..+.++...+++++
T Consensus 113 ~~~~~~-----~~-~~~~~~~~~v~-~~~~---G~-~lv~~~~~~~v~~~d~~--G~~~w~~~~~-~~~~~~~~~~~g~~ 178 (276)
T 3no2_A 113 KTEFET-----GI-ERPHAQFRQIN-KNKK---GN-YLVPLFATSEVREIAPN--GQLLNSVKLS-GTPFSSAFLDNGDC 178 (276)
T ss_dssp EEEECC-----SC-SSGGGSCSCCE-ECTT---SC-EEEEETTTTEEEEECTT--SCEEEEEECS-SCCCEEEECTTSCE
T ss_pred EEeccC-----CC-CcccccccCce-ECCC---CC-EEEEecCCCEEEEECCC--CCEEEEEECC-CCccceeEcCCCCE
Confidence 665310 00 00011122233 6666 55 89999999999999986 7888888764 45677888999999
Q ss_pred eEEecCCCeEEEEEcCCCceeee
Q 022870 267 GISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 267 l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
+++++.++.|..+|.++++++-+
T Consensus 179 ~v~~~~~~~v~~~d~~tG~~~w~ 201 (276)
T 3no2_A 179 LVACGDAHCFVQLNLESNRIVRR 201 (276)
T ss_dssp EEECBTTSEEEEECTTTCCEEEE
T ss_pred EEEeCCCCeEEEEeCcCCcEEEE
Confidence 99999889999999998888654
No 176
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.64 E-value=2.2e-13 Score=104.34 Aligned_cols=239 Identities=8% Similarity=-0.033 Sum_probs=141.0
Q ss_pred ceeEEEEcCCCCEEE-EecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCC
Q 022870 20 SVTDVCFHQTKPILF-AGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98 (291)
Q Consensus 20 ~v~~l~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 98 (291)
...+++++++|++++ +...++.|.+||..+.........+. ..+.++++.+ +++++++.. ++.|.+||......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~p~~i~~~~--~g~l~v~~~-~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL--YQPQGLAVDG--AGTVYVTDF-NNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSC--CSCCCEEECT--TCCEEEEET-TTEEEEECTTCSCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCc--CCcceeEECC--CCCEEEEcC-CCEEEEEeCCCceE
Confidence 678999999998777 55778999999976544322111121 3478999999 877655555 88999999876543
Q ss_pred CCCCcccccc-ceEEEEEeecccCccceec-cCCCCceeeecccCccccccCCC--C-CCcccCCCCCcEEEEecCCcCe
Q 022870 99 SSNPSLTIKT-NSYHFCKLSLVKEPYANAK-QANEPKDCYEREVGETVDTDSLC--D-SKDDVPAEGPKYMAVAGEQLSE 173 (291)
Q Consensus 99 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~g~~d~~ 173 (291)
.. ..... .......+.... ..... ........++............. . ..++++++|. +++ +...++.
T Consensus 100 ~~---~~~~~~~~p~~i~~~~~g--~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v-~~~~~~~ 172 (270)
T 1rwi_B 100 TV---LPFDGLNYPEGLAVDTQG--AVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VYV-TDTDNNR 172 (270)
T ss_dssp EE---CCCCSCSSEEEEEECTTC--CEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EEE-EEGGGTE
T ss_pred ee---eecCCcCCCcceEECCCC--CEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EEE-EECCCCE
Confidence 21 11111 112222222211 11111 11122223322221111111111 1 1288999886 554 3334689
Q ss_pred EEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeecccccc
Q 022870 174 VEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLE 253 (291)
Q Consensus 174 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~ 253 (291)
|.+||........... .. ...+..+. +.++ |. ++++...++.|.+||... .........+..
T Consensus 173 i~~~~~~~~~~~~~~~--------~~----~~~p~~i~-~d~~---g~-l~v~~~~~~~v~~~~~~~-~~~~~~~~~~~~ 234 (270)
T 1rwi_B 173 VVKLEAESNNQVVLPF--------TD----ITAPWGIA-VDEA---GT-VYVTEHNTNQVVKLLAGS-TTSTVLPFTGLN 234 (270)
T ss_dssp EEEECTTTCCEEECCC--------SS----CCSEEEEE-ECTT---CC-EEEEETTTSCEEEECTTC-SCCEECCCCSCS
T ss_pred EEEEecCCCceEeecc--------cC----CCCceEEE-ECCC---CC-EEEEECCCCcEEEEcCCC-CcceeeccCCCC
Confidence 9999988765433221 11 13455665 8887 54 677777788999999875 333322223345
Q ss_pred ceeEEEeecCCCeeEEecCCCeEEEEEcCCCceee
Q 022870 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 254 ~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
.+.+++++++|+++++...++.|+++++...+..+
T Consensus 235 ~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~~~ 269 (270)
T 1rwi_B 235 TPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHHH 269 (270)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECCCGGGSCC
T ss_pred CceeEEECCCCCEEEEECCCCEEEEEcCCCccccC
Confidence 78999999999988999999999999998877654
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.63 E-value=1.6e-14 Score=124.70 Aligned_cols=216 Identities=9% Similarity=0.003 Sum_probs=136.9
Q ss_pred ceEEecC-----CccceeEEEEcCCCCEEEEecCC----------CeEEEEeCCC------CeEEEEEe-eecCCcceEE
Q 022870 10 PVAVLRG-----HRASVTDVCFHQTKPILFAGTTG----------GELRIWDTVQ------HRTVSSSW-VHSAAHGIVS 67 (291)
Q Consensus 10 ~~~~l~~-----h~~~v~~l~~~~~~~~l~s~~~d----------g~v~iwd~~~------~~~~~~~~-~~~~~~~v~~ 67 (291)
....+.. |...+..++|+|||+.|++++.| ..|++||+.+ ++. ..+. .+. ..+..
T Consensus 116 ~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~--~~~~~ 192 (662)
T 3azo_A 116 VPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAH--RFVTG 192 (662)
T ss_dssp CCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCS--SEECC
T ss_pred CCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCC--CcccC
Confidence 3445555 67889999999999999988877 5899999987 544 3343 333 44888
Q ss_pred EEEeecCCCCeEEEEeCC--------CeEEEEECC-CCCCCC-CCccccccceEEEEEeecccCccceeccCCCCceeee
Q 022870 68 VATGPSIGLNKVISQGRD--------GTVKCWDIE-NGGLSS-NPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYE 137 (291)
Q Consensus 68 ~~~~~~~~~~~l~s~~~d--------g~i~iwd~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (291)
++|+| ||++|+.++.+ ..|.+||+. +++... ..+......... .
T Consensus 193 ~~~Sp--DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~-~----------------------- 246 (662)
T 3azo_A 193 PRLSP--DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIA-Q----------------------- 246 (662)
T ss_dssp CEECT--TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEE-E-----------------------
T ss_pred ceECC--CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEc-c-----------------------
Confidence 99999 99999987755 379999998 442100 000000000000 0
Q ss_pred cccCccccccCCCCCCcccCCCCCcEEEEecCCcC--eEEEEeCCCcceeeEecccccCCCCCCCCCccee-----eeeE
Q 022870 138 REVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS--EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGM-----CMAV 210 (291)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 210 (291)
++|+|+|+ +++ +++.++ .|.+||+.+++...... .+.. .... +..+
T Consensus 247 ----------------~~~spdg~-l~~-~~~~~~~~~l~~~~~~~~~~~~l~~--------~~~~-~~~p~w~~~~~~~ 299 (662)
T 3azo_A 247 ----------------AEWAPDGS-LIV-ATDRTGWWNLHRVDPATGAATQLCR--------REEE-FAGPLWTPGMRWF 299 (662)
T ss_dssp ----------------EEECTTSC-EEE-EECTTSSCEEEEECTTTCCEEESSC--------CSSB-SSCCCCSTTCCSE
T ss_pred ----------------eEECCCCe-EEE-EECCCCCeEEEEEECCCCceeeccc--------cccc-ccCccccccCceE
Confidence 55999998 555 455567 67777776665433222 1111 1000 2334
Q ss_pred EEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEE-EeecCCCeeEEecCCC--eEEEEEcCCCcee
Q 022870 211 QAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCL-SIDESCNGGISGGADQ--KIVLYNLDHSTVS 287 (291)
Q Consensus 211 ~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~l~s~s~dg--~i~vw~~~~~~~~ 287 (291)
. |+|+ ++ +++++.. +.+++|.+...+..+..+..|...+..+ +++++..++++++.+. .|.+||+.+++..
T Consensus 300 ~-~~~~---~~-~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 300 A-PLAN---GL-IAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRAR 373 (662)
T ss_dssp E-ECTT---SC-EEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred e-EeCC---CE-EEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceE
Confidence 4 7776 44 8888888 9999995443234467788888888887 6776655566666665 4555566676643
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.63 E-value=1.4e-14 Score=125.62 Aligned_cols=249 Identities=10% Similarity=-0.018 Sum_probs=150.9
Q ss_pred CCccceeEEEEcCCCCEEE-----EecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCe---
Q 022870 16 GHRASVTDVCFHQTKPILF-----AGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT--- 87 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~-----s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~--- 87 (291)
+|...+..++|||||++|| .|+.+.+|++||+.+++.+. ..+........++|+| ||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wsp--Dg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTP--DSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECT--TSSEEEEEECCCCTTS
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEec--CCCEEEEEEecCCCCC
Confidence 4666799999999999998 55566899999999887641 1121111126899999 9999999888776
Q ss_pred ----------EEEEECCCCCCCCCCcccccc--ceEEEEEeecccCccceeccCC-CCceeeecccCccccccCCCCCC-
Q 022870 88 ----------VKCWDIENGGLSSNPSLTIKT--NSYHFCKLSLVKEPYANAKQAN-EPKDCYEREVGETVDTDSLCDSK- 153 (291)
Q Consensus 88 ----------i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 153 (291)
|++|++.++......+..... .......+++............ ....++.++........+..+..
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 273 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGA 273 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSC
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCc
Confidence 999999887532211222221 1233444555554443333332 22233333221111111111111
Q ss_pred ---cccCCCCCcEEEEecC--CcCeEEEEeCCCcce--eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEe
Q 022870 154 ---DDVPAEGPKYMAVAGE--QLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (291)
Q Consensus 154 ---~~~~~~~~~~~~~~g~--~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~ 226 (291)
..+ ++|. +++.+.. .++.|.+||+.+++. ...+. .+. ....+..+. |+ + +. ++++
T Consensus 274 ~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~--------~~~--~~~~l~~~~-~~-~---~~-lv~~ 335 (695)
T 2bkl_A 274 KYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIV--------PED--SSASLLSVS-IV-G---GH-LSLE 335 (695)
T ss_dssp CEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEE--------CCC--SSCEEEEEE-EE-T---TE-EEEE
T ss_pred eEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEe--------cCC--CCCeEEEEE-EE-C---CE-EEEE
Confidence 333 6776 6654431 358899999987653 23333 111 122344454 65 2 43 7888
Q ss_pred ecCCCcEEEEEccCCCCceeecccc-ccceeEEEeecCCCeeE----EecCCCeEEEEEcCCCce
Q 022870 227 GYEDGSILVWDIRNPGIPLTAMKVH-LEPVLCLSIDESCNGGI----SGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 227 g~~dg~i~vwd~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~----s~s~dg~i~vw~~~~~~~ 286 (291)
...|+..++|.+...+.....+..+ .+.+..+++++++..++ +....++|++||+.+++.
T Consensus 336 ~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 336 YLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 8999988888766325556666655 66788889999987776 334458899999988764
No 179
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.62 E-value=3e-12 Score=102.44 Aligned_cols=259 Identities=8% Similarity=0.012 Sum_probs=151.2
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEec----------CCCeEEEEeCCCCeEEEEEeee-cC----CcceEEEEEeec
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVH-SA----AHGIVSVATGPS 73 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~-~~----~~~v~~~~~~~~ 73 (291)
+.+.++..-..+ .++++|||++++.+. .++.|.+||..+.+.+..+... .. ...-..++|+|
T Consensus 58 ~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp- 134 (373)
T 2mad_H 58 SILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP- 134 (373)
T ss_pred eEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECC-
Confidence 344455433333 899999999998875 3678999999988888776543 00 01145899999
Q ss_pred CCCCeEEEEeC--CCeEEEEECCCCCCCCCCccc-cccceEEEEEeecccCccceeccCCCCceeeecccCcccccc---
Q 022870 74 IGLNKVISQGR--DGTVKCWDIENGGLSSNPSLT-IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTD--- 147 (291)
Q Consensus 74 ~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 147 (291)
||++|+++.. ++.|.++| .+++... . +..... ..+.+............+....++. ..+.....
T Consensus 135 -DG~~l~v~n~~~~~~v~viD-~t~~~~~----~~i~~~~~--~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~ 205 (373)
T 2mad_H 135 -NNADLLFFQFAAGPAVGLVV-QGGSSDD----QLLSSPTC--YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVG 205 (373)
T ss_pred -CCCEEEEEecCCCCeEEEEE-CCCCEEe----EEcCCCce--EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEecc
Confidence 9999998874 57899999 8886543 2 221111 1111111111112222333333444 22222100
Q ss_pred --CCCCCC----cccCCCCCcEEEEecCCcCeEEEEeCCCcce--eeEecccccCCCCCCCCCcceeeeeEEEecCCCCC
Q 022870 148 --SLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ 219 (291)
Q Consensus 148 --~~~~~~----~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 219 (291)
...... ..+.+++..+++++ .++.+.+.|+..... +..+.... ...............+. ++|++
T Consensus 206 ~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~v~vid~~~~~~~v~~~~~~~~--~~~~~~~~~p~g~~~~~-~s~d~-- 278 (373)
T 2mad_H 206 AMLTAAQNLLTQPAQANKSGRIVWPV--YSGKILQADISAAGATNKAPIDALS--GGRKADTWRPGGWQQVA-YLKSS-- 278 (373)
T ss_pred ccccCCcceeecceeEecCCEEEEEc--CCceEEEEeccCCcceEeeeeeecC--CcccccceecCceEeEE-ECCCC--
Confidence 011111 34566666665544 357899999976532 22221100 00000000011122244 88873
Q ss_pred CceEEEeecC----------CCcEEEEEccCCCCceeeccccccceeEEEeecCCC-eeEEec-CCCeEEEEEcCCCcee
Q 022870 220 GFVNVLAGYE----------DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGG-ADQKIVLYNLDHSTVS 287 (291)
Q Consensus 220 g~~~l~~g~~----------dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s-~dg~i~vw~~~~~~~~ 287 (291)
. .++++.. ++.|.++|..+ .+.+..+.. .....+++|+|+|+ +++++. .++.|.++|+.+++.+
T Consensus 279 -~-~lyV~~~~~~~~~~~~~~~~V~VID~~t-~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 279 -D-GIYLLTSEQSAWKLHAAAKEVTSVTGLV-GQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred -C-EEEEEeccCCcccccCCCCeEEEEECCC-CEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 3 4444322 46899999998 788788764 34689999999999 777777 5899999999999988
Q ss_pred eee
Q 022870 288 HCV 290 (291)
Q Consensus 288 ~~~ 290 (291)
.++
T Consensus 355 ~~i 357 (373)
T 2mad_H 355 QST 357 (373)
T ss_pred eee
Confidence 763
No 180
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.60 E-value=1.6e-13 Score=109.96 Aligned_cols=197 Identities=8% Similarity=0.043 Sum_probs=120.1
Q ss_pred EEEEecCC--CeEEEEeC--CCCeEEEEEeee-cCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECC-CCCCCCCCccc
Q 022870 32 ILFAGTTG--GELRIWDT--VQHRTVSSSWVH-SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE-NGGLSSNPSLT 105 (291)
Q Consensus 32 ~l~s~~~d--g~v~iwd~--~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~ 105 (291)
+++.|+.. +.|.+|++ .+++....-... .....+..++|+| ++++|++++.+ .|.+|++. +++... ...
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~sp--dg~~l~~~~~~-~v~~~~~~~~g~~~~--~~~ 78 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDH--ERKNIYGAAMK-KWSSFAVKSPTEIVH--EAS 78 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECT--TSSEEEEEEBT-EEEEEEEEETTEEEE--EEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECC--CCCEEEEEccc-eEEEEEECCCCCEEE--eeE
Confidence 35555542 56777664 456543221111 1112478999999 99999999888 99999987 543211 000
Q ss_pred cccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecC-------------CcC
Q 022870 106 IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE-------------QLS 172 (291)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-------------~d~ 172 (291)
. .....+.. ++|+|+|+.+++.+++ .++
T Consensus 79 --------~--~~~g~~~~-----------------------------~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g 119 (365)
T 1jof_A 79 --------H--PIGGHPRA-----------------------------NDADTNTRAIFLLAAKQPPYAVYANPFYKFAG 119 (365)
T ss_dssp --------E--ECCSSGGG-----------------------------GCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred --------e--ecCCCCcc-----------------------------EEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence 0 00000000 6699999864332332 588
Q ss_pred eEEEEeCC-CcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeec-CCCcEEEEEcc-CCCCce--ee
Q 022870 173 EVEIWDLN-TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY-EDGSILVWDIR-NPGIPL--TA 247 (291)
Q Consensus 173 ~i~~wd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~-~dg~i~vwd~~-~~~~~~--~~ 247 (291)
.+.+|++. .++....+... .+ .....+..+. |+|+ |+ +|+++. .++.|++||+. + ++.. ..
T Consensus 120 ~v~v~~~~~~g~~~~~~~~~------~~--~~~~~~~~~~-~spd---G~-~l~~~~~~~~~v~~~~~~~~-g~~~~~~~ 185 (365)
T 1jof_A 120 YGNVFSVSETGKLEKNVQNY------EY--QENTGIHGMV-FDPT---ET-YLYSADLTANKLWTHRKLAS-GEVELVGS 185 (365)
T ss_dssp EEEEEEECTTCCEEEEEEEE------EC--CTTCCEEEEE-ECTT---SS-EEEEEETTTTEEEEEEECTT-SCEEEEEE
T ss_pred eEEEEccCCCCcCcceEeeE------Ee--CCCCcceEEE-ECCC---CC-EEEEEcCCCCEEEEEEECCC-CCEEEeee
Confidence 99999997 45544333210 00 0123456676 9998 55 565544 57899999998 5 4432 23
Q ss_pred cc--ccccceeEEEeecCCCeeEEecC-CCeEEEEEcC--CCce
Q 022870 248 MK--VHLEPVLCLSIDESCNGGISGGA-DQKIVLYNLD--HSTV 286 (291)
Q Consensus 248 ~~--~h~~~v~~~~~~~~~~~l~s~s~-dg~i~vw~~~--~~~~ 286 (291)
+. .|...+..++|+|+|++|++++. ++.|.+|+++ ++++
T Consensus 186 ~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 186 VDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMP 229 (365)
T ss_dssp EECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcE
Confidence 33 23567899999999998877664 7899999876 4554
No 181
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.59 E-value=1.1e-12 Score=100.61 Aligned_cols=199 Identities=12% Similarity=0.024 Sum_probs=138.0
Q ss_pred CCCceEEecCCc-cceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeC-
Q 022870 7 PPDPVAVLRGHR-ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR- 84 (291)
Q Consensus 7 ~~~~~~~l~~h~-~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~- 84 (291)
.++.+.++..+. ..+.+++++|+|+++++ .++.|..||. +++.+..+..+.. ..+.++.+.+ +|+.+++.+.
T Consensus 24 tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~-~~~~~~~~~~--dG~~lv~~~~~ 97 (276)
T 3no2_A 24 TKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAPAG-CEMQTARILP--DGNALVAWCGH 97 (276)
T ss_dssp TTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECCTT-CEEEEEEECT--TSCEEEEEEST
T ss_pred CCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCCCC-ccccccEECC--CCCEEEEecCC
Confidence 456677777765 57899999999998883 4778999998 8999998886532 3488999999 9999998887
Q ss_pred CCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEE
Q 022870 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (291)
Q Consensus 85 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
++.|..+|. +++.+. ...... ... . .......+++.++|..++
T Consensus 98 ~~~v~~vd~-~Gk~l~----~~~~~~------~~~-~-------------------------~~~~~~~v~~~~~G~~lv 140 (276)
T 3no2_A 98 PSTILEVNM-KGEVLS----KTEFET------GIE-R-------------------------PHAQFRQINKNKKGNYLV 140 (276)
T ss_dssp TEEEEEECT-TSCEEE----EEEECC------SCS-S-------------------------GGGSCSCCEECTTSCEEE
T ss_pred CCEEEEEeC-CCCEEE----EEeccC------CCC-c-------------------------ccccccCceECCCCCEEE
Confidence 777877775 343322 110000 000 0 000000145778887554
Q ss_pred EEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCc
Q 022870 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (291)
Q Consensus 165 ~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (291)
+...++.|..||.. ++.+.++.. . ....++. +.++ |. +++++..++.|..+|..+ ++.
T Consensus 141 --~~~~~~~v~~~d~~-G~~~w~~~~--------~-----~~~~~~~-~~~~---g~-~~v~~~~~~~v~~~d~~t-G~~ 198 (276)
T 3no2_A 141 --PLFATSEVREIAPN-GQLLNSVKL--------S-----GTPFSSA-FLDN---GD-CLVACGDAHCFVQLNLES-NRI 198 (276)
T ss_dssp --EETTTTEEEEECTT-SCEEEEEEC--------S-----SCCCEEE-ECTT---SC-EEEECBTTSEEEEECTTT-CCE
T ss_pred --EecCCCEEEEECCC-CCEEEEEEC--------C-----CCcccee-EcCC---CC-EEEEeCCCCeEEEEeCcC-CcE
Confidence 45568999999998 998888873 1 1223343 6666 44 788888888999999998 888
Q ss_pred eeeccccc------cceeEEEeecCCCeeEEe
Q 022870 245 LTAMKVHL------EPVLCLSIDESCNGGISG 270 (291)
Q Consensus 245 ~~~~~~h~------~~v~~~~~~~~~~~l~s~ 270 (291)
+.++..+. ..+.+++..++|+++++.
T Consensus 199 ~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 199 VRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 88876432 237888888999988776
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.58 E-value=4.9e-12 Score=106.32 Aligned_cols=257 Identities=13% Similarity=0.054 Sum_probs=158.9
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCC--CCeEEEEEeeecCCcceEEEEEe----ecCCCCeEEEE
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATG----PSIGLNKVISQ 82 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~l~s~ 82 (291)
+.+.++... ..+..+.|+|||+++++++.|+.|.+||+. +++.+..+.... ....++|+ | +|++++++
T Consensus 188 ~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~---~P~~ia~s~~~~p--DGk~l~v~ 261 (567)
T 1qks_A 188 EIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS---EARSIETSKMEGW--EDKYAIAG 261 (567)
T ss_dssp CEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS---EEEEEEECCSTTC--TTTEEEEE
T ss_pred eEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC---CCceeEEccccCC--CCCEEEEE
Confidence 445555532 346789999999999999999999999995 788888777643 25799999 7 88888866
Q ss_pred eC-CCeEEEEECCCCCCCCCCcccccc----------c-eEE--------------------------------------
Q 022870 83 GR-DGTVKCWDIENGGLSSNPSLTIKT----------N-SYH-------------------------------------- 112 (291)
Q Consensus 83 ~~-dg~i~iwd~~~~~~~~~~~~~~~~----------~-~~~-------------------------------------- 112 (291)
.. +++|.++|..+.+.+.. ..... . ...
T Consensus 262 n~~~~~v~ViD~~t~~~~~~--i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~ 339 (567)
T 1qks_A 262 AYWPPQYVIMDGETLEPKKI--QSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS 339 (567)
T ss_dssp EEETTEEEEEETTTCCEEEE--EECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE
T ss_pred EccCCeEEEEECCCCcEEEE--EeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee
Confidence 55 58999999887665331 11000 0 000
Q ss_pred ------EEEeecccCccceeccCCCCceeeecccCccccccCC----CCCC--cc-cCCCCCcEEEEecCCcCeEEEEeC
Q 022870 113 ------FCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSL----CDSK--DD-VPAEGPKYMAVAGEQLSEVEIWDL 179 (291)
Q Consensus 113 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~-~~~~~~~~~~~~g~~d~~i~~wd~ 179 (291)
...+++.......+......+..++....+....... .|.. .. ++|++..+++++.-.++.|.++|.
T Consensus 340 ~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~ 419 (567)
T 1qks_A 340 AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGT 419 (567)
T ss_dssp CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEEC
T ss_pred ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecC
Confidence 0011111111111222233445556665543322211 2322 33 478766666644334689999999
Q ss_pred CC-------cceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecC-------CCcEEEEEccCC----
Q 022870 180 NT-------AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE-------DGSILVWDIRNP---- 241 (291)
Q Consensus 180 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~-------dg~i~vwd~~~~---- 241 (291)
.+ .+.++++.. .. .....+. ++|+ ++ ++.+... ...|.++|+.+.
T Consensus 420 ~~~~~~~~~~kvv~~i~~--------~g----~g~~~i~-~~p~---~~-~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g 482 (567)
T 1qks_A 420 DPEGHPDNAWKILDSFPA--------LG----GGSLFIK-THPN---SQ-YLYVDATLNPEAEISGSVAVFDIKAMTGDG 482 (567)
T ss_dssp CTTTCTTTBTSEEEEEEC--------SC----SCCCCEE-CCTT---CS-EEEEECTTCSSHHHHTCEEEEEGGGCCCSS
T ss_pred CCCCCccccCEEEEEEec--------CC----CCCEEEE-eCCC---CC-eEEEecCCCCCcccCceEEEEECCcccccc
Confidence 87 556666652 10 1123344 7888 44 5666542 459999999874
Q ss_pred -CCceeecc--------ccccceeEEEeecCCCeeEEec-----CCCeEEEEEcCCCceeeee
Q 022870 242 -GIPLTAMK--------VHLEPVLCLSIDESCNGGISGG-----ADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 242 -~~~~~~~~--------~h~~~v~~~~~~~~~~~l~s~s-----~dg~i~vw~~~~~~~~~~~ 290 (291)
......+. .-...+..+.|+++|..+..+. .++.|.|+|..+.++...+
T Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i 545 (567)
T 1qks_A 483 SDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVI 545 (567)
T ss_dssp SCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEE
T ss_pred cCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEe
Confidence 22222221 1235788999999999886552 3799999999999987764
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.57 E-value=2.4e-13 Score=109.89 Aligned_cols=233 Identities=9% Similarity=-0.111 Sum_probs=133.4
Q ss_pred eEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEE-------------------EEEeecCCCCeEEEE
Q 022870 22 TDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVS-------------------VATGPSIGLNKVISQ 82 (291)
Q Consensus 22 ~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~~l~s~ 82 (291)
..+.|+|+|++|+.++.++.|++||+.+++.......+... ... +.|+| +++.++.+
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~--~~~g~~l~~~~~~~~~~~~~~~~~~sp--dg~~~~~~ 159 (396)
T 3c5m_A 84 FGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEW--KGYGTWVANSDCTKLVGIEILKRDWQP--LTSWEKFA 159 (396)
T ss_dssp TTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTE--EEEEEEEECTTSSEEEEEEEEGGGCCC--CCSHHHHH
T ss_pred ccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEeccccc--CCCCCEEEeccCCccccccccccccCC--CCcceeee
Confidence 34889999999999999999999999888766555433321 222 34567 66666544
Q ss_pred -----eCCCeEEEEECCCCCCCCCCccccccceEEEEEeec-ccCccceeccCC-----CCceeeecccCccccccCCCC
Q 022870 83 -----GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL-VKEPYANAKQAN-----EPKDCYEREVGETVDTDSLCD 151 (291)
Q Consensus 83 -----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 151 (291)
..+..|.+||+.+++... +. ..........+++ ............ ..+..++....... .+..+
T Consensus 160 ~~~~~~~~~~l~~~d~~~g~~~~--~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~--~l~~~ 234 (396)
T 3c5m_A 160 EFYHTNPTCRLIKVDIETGELEV--IH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR--KIKEH 234 (396)
T ss_dssp HHHHTCCCEEEEEEETTTCCEEE--EE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE--ESSCC
T ss_pred eeccCCCcceEEEEECCCCcEEe--ec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee--Eeecc
Confidence 456789999998875422 11 1111222233333 222121211111 12333444332211 11112
Q ss_pred C-C-----cccCCCCCcEEEEecC---CcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecC-CCCCCc
Q 022870 152 S-K-----DDVPAEGPKYMAVAGE---QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP-SKSQGF 221 (291)
Q Consensus 152 ~-~-----~~~~~~~~~~~~~~g~---~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~g~ 221 (291)
. . ++|+|+|+.+++++.. .++.|++||+.+++....... . .. . .. |+| + |+
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~--------~-----~~-~-~~-~s~~d---g~ 295 (396)
T 3c5m_A 235 AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM--------P-----PC-S-HL-MSNFD---GS 295 (396)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC--------C-----SE-E-EE-EECSS---SS
T ss_pred CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC--------C-----CC-C-CC-ccCCC---Cc
Confidence 1 1 6899999887654321 114599999988765433221 0 11 1 44 998 7 55
Q ss_pred eEEEeec----------------CCCcEEEEEccCCCCceeecccccc-----------ceeEEEeecCCCeeEEecC-C
Q 022870 222 VNVLAGY----------------EDGSILVWDIRNPGIPLTAMKVHLE-----------PVLCLSIDESCNGGISGGA-D 273 (291)
Q Consensus 222 ~~l~~g~----------------~dg~i~vwd~~~~~~~~~~~~~h~~-----------~v~~~~~~~~~~~l~s~s~-d 273 (291)
+++.++ .++.|++||+.+ ++. ..+..+.. .+..++|+|+|+.|+.++. +
T Consensus 296 -~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~-~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~ 372 (396)
T 3c5m_A 296 -LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA-KSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFE 372 (396)
T ss_dssp -EEEEEECCC----------CCCCCCEEEEEETTT-TBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT
T ss_pred -eEEEecCCcceeeccccccccCCCCcEEEEeccc-Cce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCC
Confidence 565543 347899999986 443 44555544 2567899999998876664 4
Q ss_pred CeEEE--EEcCCCc
Q 022870 274 QKIVL--YNLDHST 285 (291)
Q Consensus 274 g~i~v--w~~~~~~ 285 (291)
+...+ .++.+++
T Consensus 373 ~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 373 GVPAIYIADVPESY 386 (396)
T ss_dssp SSCEEEEEECCTTC
T ss_pred CCceEEEEEEcccc
Confidence 55444 4555554
No 184
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.55 E-value=7.6e-13 Score=105.11 Aligned_cols=189 Identities=11% Similarity=-0.013 Sum_probs=116.9
Q ss_pred cceeEEEEcCCCCEEEEecCC---C--eEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC--------
Q 022870 19 ASVTDVCFHQTKPILFAGTTG---G--ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD-------- 85 (291)
Q Consensus 19 ~~v~~l~~~~~~~~l~s~~~d---g--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-------- 85 (291)
..+..++|+|||++|+..+.+ + .|.+||+.+++.......+ . +..++|+| +|+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~---~-~~~~~wsp--dg~~l~~~~~~~~~~~~~~ 132 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK---N-IRSLEWNE--DSRKLLIVGFKRREDEDFI 132 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES---E-EEEEEECT--TSSEEEEEEECCCC-----
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC---C-ccceeECC--CCCEEEEEEccCCCcCCcE
Confidence 457889999999999877653 2 4888898887766544332 3 89999999 99988877643
Q ss_pred -------------------CeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccc
Q 022870 86 -------------------GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT 146 (291)
Q Consensus 86 -------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (291)
..|.+||+.+++... .+.. . ..
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~----~l~~-~------~~---------------------------- 173 (347)
T 2gop_A 133 FEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE----EFEK-P------RF---------------------------- 173 (347)
T ss_dssp ----CCCC---------CEEEEEEEETTTTEEEE----EEEE-E------TT----------------------------
T ss_pred EEcccceeecCcccccCccceEEEEECCCCeEEe----eecC-C------Cc----------------------------
Confidence 457777776553200 0000 0 00
Q ss_pred cCCCCCCcccCCCCCcEEEEecCCc-----C-eEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCC
Q 022870 147 DSLCDSKDDVPAEGPKYMAVAGEQL-----S-EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQG 220 (291)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~g~~d-----~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g 220 (291)
..++|+|+| +++++...+ . ...||.+.+++ ...+.. + ... . .++|+ |
T Consensus 174 -----~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~--------~-----~~~--~-~~spd---g 226 (347)
T 2gop_A 174 -----SSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFE--------K-----VSF--Y-AVDSD---G 226 (347)
T ss_dssp -----CEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEE--------E-----ESE--E-EEEEC---S
T ss_pred -----ccccCCCCe--EEEEEecccccccccccccEEEeCCCc-eEEecc--------C-----cce--e-eECCC---C
Confidence 005689998 444332211 1 33444333443 333331 1 111 1 24666 5
Q ss_pred ceEEEeecCC--------CcEEEEEccCCCCceeeccccccceeE-EEeecCCCeeEEecCCCeEEEEEcCCCce
Q 022870 221 FVNVLAGYED--------GSILVWDIRNPGIPLTAMKVHLEPVLC-LSIDESCNGGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 221 ~~~l~~g~~d--------g~i~vwd~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~l~s~s~dg~i~vw~~~~~~~ 286 (291)
+ .|+.++.+ ..|++|| + ++.......|...+.. +.|+ ++ ++++++.++.+++| +++++.
T Consensus 227 ~-~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~ 294 (347)
T 2gop_A 227 E-RILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI 294 (347)
T ss_dssp S-CEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE
T ss_pred C-EEEEEEccccCCccccceEEEEC--C-CceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce
Confidence 5 55554432 4788888 4 5555555666778886 8999 88 88999999999999 875554
No 185
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.55 E-value=6.4e-12 Score=98.29 Aligned_cols=246 Identities=9% Similarity=0.036 Sum_probs=142.7
Q ss_pred ecCCccceeEEEEcCCCCEEEE-------ecCCCeEEEEeCCCCeEEEEEe----eecCCcceEEEEEeecCC-CCeEEE
Q 022870 14 LRGHRASVTDVCFHQTKPILFA-------GTTGGELRIWDTVQHRTVSSSW----VHSAAHGIVSVATGPSIG-LNKVIS 81 (291)
Q Consensus 14 l~~h~~~v~~l~~~~~~~~l~s-------~~~dg~v~iwd~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~-~~~l~s 81 (291)
+...-....+++|++++.++++ +..++.|.+||..+++...... .+. ..+.++++++ + ++++++
T Consensus 13 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~--~~~~~i~~~~--~~g~l~v~ 88 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYG--GIPAGCQCDR--DANQLFVA 88 (314)
T ss_dssp EECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEE--CCEEEEEECS--SSSEEEEE
T ss_pred hhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCC--CCCceEEEec--CCCcEEEE
Confidence 3444456789999999988877 6778999999988777543221 133 3389999999 7 555554
Q ss_pred EeCCCeEEEEECCCCCCCCCCc-cccc----cceEEEEEeecccCccceeccCCC--------------CceeeecccCc
Q 022870 82 QGRDGTVKCWDIENGGLSSNPS-LTIK----TNSYHFCKLSLVKEPYANAKQANE--------------PKDCYEREVGE 142 (291)
Q Consensus 82 ~~~dg~i~iwd~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 142 (291)
.. .+.|.+||.. ++... . .... ........+... .......... ...++.++...
T Consensus 89 ~~-~~~l~~~d~~-g~~~~--~~~~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 162 (314)
T 1pjx_A 89 DM-RLGLLVVQTD-GTFEE--IAKKDSEGRRMQGCNDCAFDYE--GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG 162 (314)
T ss_dssp ET-TTEEEEEETT-SCEEE--CCSBCTTSCBCBCCCEEEECTT--SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS
T ss_pred EC-CCCEEEEeCC-CCEEE--EEeccCCCccccCCcCEEECCC--CCEEEEecCcccccccccccccCCCCeEEEECCCC
Confidence 44 4479999987 54321 1 1100 011111112111 1111111111 12333333221
Q ss_pred cccccCC---CCCCcccC----CCCCcEEEEecCCcCeEEEEeCC-Cccee--eEecccccCCCCCCCCCcceeeeeEEE
Q 022870 143 TVDTDSL---CDSKDDVP----AEGPKYMAVAGEQLSEVEIWDLN-TAERC--TRLHQNSCGGSPNFSSKGRGMCMAVQA 212 (291)
Q Consensus 143 ~~~~~~~---~~~~~~~~----~~~~~~~~~~g~~d~~i~~wd~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (291)
....... ....++++ |+++.+++ +...++.|.+||.. +++.. ..+.. ..++. ......+.
T Consensus 163 ~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v-~~~~~~~i~~~~~~~~g~~~~~~~~~~-----~~~~~---~~~p~~i~- 232 (314)
T 1pjx_A 163 QMIQVDTAFQFPNGIAVRHMNDGRPYQLIV-AETPTKKLWSYDIKGPAKIENKKVWGH-----IPGTH---EGGADGMD- 232 (314)
T ss_dssp CEEEEEEEESSEEEEEEEECTTSCEEEEEE-EETTTTEEEEEEEEETTEEEEEEEEEE-----CCCCS---SCEEEEEE-
T ss_pred CEEEeccCCCCcceEEEecccCCCCCEEEE-EECCCCeEEEEECCCCCccccceEEEE-----CCCCC---CCCCCceE-
Confidence 1111110 11117888 98876655 44457899999986 34321 11110 00110 03455665
Q ss_pred ecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCC-eeEEecCCCeEEEEEcCCC
Q 022870 213 YLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 213 ~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~dg~i~vw~~~~~ 284 (291)
+.++ |. ++++...++.|.+||.++ ++.+..+..+...+.+++|+++++ ++++...++.|..|++...
T Consensus 233 ~d~~---G~-l~v~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 233 FDED---NN-LLVANWGSSHIEVFGPDG-GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EBTT---CC-EEEEEETTTEEEEECTTC-BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred ECCC---CC-EEEEEcCCCEEEEEcCCC-CcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 8887 54 666666788999999886 566666666667899999999998 4456666789999998754
No 186
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.54 E-value=1.6e-12 Score=103.91 Aligned_cols=119 Identities=11% Similarity=0.144 Sum_probs=79.1
Q ss_pred CCCEEEEe------cCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEe----------CCCeEEEEE
Q 022870 29 TKPILFAG------TTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTVKCWD 92 (291)
Q Consensus 29 ~~~~l~s~------~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~----------~dg~i~iwd 92 (291)
++.+++.. ..|+.|.+||..+++.+..+..+. .+ .++|+| ++++++++. .+++|.+||
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~--~p--~i~~sp--dg~~lyv~~~~~~~~~~g~~~~~v~v~d 87 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAF--NG--HVQVSN--DGKKIYTMTTYHERITRGKRSDVVEVWD 87 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCE--EE--EEEECT--TSSEEEEEEEEETTSSSSCEEEEEEEEE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCC--CC--ceEECC--CCCEEEEEEecccccccCCCCCEEEEEE
Confidence 45555543 247899999999999888877653 33 899999 999999876 367899999
Q ss_pred CCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcC
Q 022870 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS 172 (291)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~ 172 (291)
..+.+... .+...... ......+ ..++++|+|++++++....++
T Consensus 88 ~~t~~~~~----~i~~~~~~---~~~g~~p-----------------------------~~i~~spdg~~l~v~n~~~~~ 131 (361)
T 2oiz_A 88 ADKLTFEK----EISLPPKR---VQGLNYD-----------------------------GLFRQTTDGKFIVLQNASPAT 131 (361)
T ss_dssp TTTCCEEE----EEEECTTB---CCBCCCG-----------------------------GGEEECTTSSEEEEEEESSSE
T ss_pred CcCCcEEE----EEEcCccc---cccCCCc-----------------------------ceEEECCCCCEEEEECCCCCC
Confidence 98765432 11100000 0000000 007799999988765433368
Q ss_pred eEEEEeCCCcceeeE-ec
Q 022870 173 EVEIWDLNTAERCTR-LH 189 (291)
Q Consensus 173 ~i~~wd~~~~~~~~~-~~ 189 (291)
.|.+||+.+++.+.. +.
T Consensus 132 ~v~v~d~~~~~~~~~~i~ 149 (361)
T 2oiz_A 132 SIGIVDVAKGDYVEDVTA 149 (361)
T ss_dssp EEEEEETTTTEEEEEEGG
T ss_pred eEEEEECCCCcEEEEEec
Confidence 999999999988777 54
No 187
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.53 E-value=2.6e-12 Score=103.60 Aligned_cols=257 Identities=8% Similarity=0.023 Sum_probs=153.9
Q ss_pred ceEEecCCccceeEEEEcCCCCEEEEec----------CCCeEEEEeCCCCeEEEEEeee-cC----CcceEEEEEeecC
Q 022870 10 PVAVLRGHRASVTDVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVH-SA----AHGIVSVATGPSI 74 (291)
Q Consensus 10 ~~~~l~~h~~~v~~l~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~-~~----~~~v~~~~~~~~~ 74 (291)
.+.++..-..+ .++++|||++++.+. .++.|.++|..+.+.+..+... .. ......++++|
T Consensus 111 vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp-- 186 (426)
T 3c75_H 111 ILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP-- 186 (426)
T ss_dssp EEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT--
T ss_pred EEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcC--
Confidence 34444433344 799999999888775 3678999999999998887653 00 01246789999
Q ss_pred CCCeEEEEeC--CCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCcccc---ccCC
Q 022870 75 GLNKVISQGR--DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVD---TDSL 149 (291)
Q Consensus 75 ~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 149 (291)
||++++.+.. ++.|.+.|+.+.+... ++..... ....+............+....++....+... ..+.
T Consensus 187 DGk~lyV~n~~~~~~VsVID~~t~kvv~----~I~v~g~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~ 260 (426)
T 3c75_H 187 DNKNLLFYQFSPAPAVGVVDLEGKTFDR----MLDVPDC--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFH 260 (426)
T ss_dssp TSSEEEEEECSSSCEEEEEETTTTEEEE----EEECCSE--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCS
T ss_pred CCCEEEEEecCCCCeEEEEECCCCeEEE----EEEcCCc--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeec
Confidence 9999998764 5799999999987644 2222111 01111111111112222222333332221110 0010
Q ss_pred CC-C----CcccCCCCCcEEEEecCCcCeEEEEeCCCccee--eEecccccCCCCCCCCCc---ceeeeeEEEecCCCCC
Q 022870 150 CD-S----KDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERC--TRLHQNSCGGSPNFSSKG---RGMCMAVQAYLPSKSQ 219 (291)
Q Consensus 150 ~~-~----~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~ 219 (291)
.. . ...+.+++..+++++. .+.+.+.|+...... ..+... . ...... ......+. ++|++
T Consensus 261 v~~~p~~~~~~~~~dg~~~~~~s~--~g~V~ViD~~~~~~~v~~~~~~~---~--~~~i~~g~~p~g~~~va-~s~dg-- 330 (426)
T 3c75_H 261 TEDELLINHPAFSLRSGRLVWPTY--TGKIFQADLTAEGATFRAPIEAL---T--EAERADDWRPGGWQQTA-YHRQS-- 330 (426)
T ss_dssp CTTSCBCSCCEECTTTCEEEEEBT--TSEEEEEEECSSCEEECCCEESS---C--TTTGGGTEEECSSSCEE-EEGGG--
T ss_pred cCCCceeeEeeecCCCCEEEEEeC--CCcEEEEeccCCceEEeeeeeec---c--ccccccccccCCceeeE-EcCCC--
Confidence 00 0 1567889888776543 589999999765422 111100 0 000000 00011244 88873
Q ss_pred CceEEEeec----------CCCcEEEEEccCCCCceeeccccccceeEEEeecCCC-eeEEec-CCCeEEEEEcCCCcee
Q 022870 220 GFVNVLAGY----------EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGG-ADQKIVLYNLDHSTVS 287 (291)
Q Consensus 220 g~~~l~~g~----------~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s-~dg~i~vw~~~~~~~~ 287 (291)
. .+++.. .++.|.++|..+ .+.+..+.. .....+++|+|+++ ++++.. .++.|.++|+.+++.+
T Consensus 331 -~-rlyVa~~~~~~gthk~~s~~VsVID~~T-~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 331 -D-RIYLLVDQRDEWKHKAASRFVVVLNAET-GERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp -T-EEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred -C-EEEEEecccccccccCCCCEEEEEECCC-CeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence 3 333332 135799999999 888888864 33589999999999 777777 5899999999999998
Q ss_pred eee
Q 022870 288 HCV 290 (291)
Q Consensus 288 ~~~ 290 (291)
.++
T Consensus 407 ~tI 409 (426)
T 3c75_H 407 RSV 409 (426)
T ss_dssp EEE
T ss_pred EEe
Confidence 875
No 188
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.53 E-value=5.2e-12 Score=100.17 Aligned_cols=262 Identities=8% Similarity=0.039 Sum_probs=149.1
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEec----------CCCeEEEEeCCCCeEEEEEeeecCC-----cceEEEEEeec
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVHSAA-----HGIVSVATGPS 73 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~~~-----~~v~~~~~~~~ 73 (291)
+.+.++..-..+ . ++++|||++++.+. .++.|.+||..+.+.+..+....+. ..-..++++|
T Consensus 70 ~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp- 146 (386)
T 3sjl_D 70 RVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP- 146 (386)
T ss_dssp EEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-
T ss_pred eEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC-
Confidence 334445433344 4 99999999887765 3678999999999998888653200 1246799999
Q ss_pred CCCCeEEEEeC--CCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeeccc-Ccccc---cc
Q 022870 74 IGLNKVISQGR--DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV-GETVD---TD 147 (291)
Q Consensus 74 ~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~ 147 (291)
||++++++.. ++.|.++|+.+.+... ++..... ....+............+....++... .+... ..
T Consensus 147 -DGk~lyVan~~~~~~VsVID~~t~~vv~----tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~ 219 (386)
T 3sjl_D 147 -DGKTLLFYQFSPAPAVGVVDLEGKAFKR----MLDVPDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEV 219 (386)
T ss_dssp -TSSEEEEEECSSSCEEEEEETTTTEEEE----EEECCSE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCC
T ss_pred -CCCEEEEEEcCCCCeEEEEECCCCcEEE----EEECCCc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecce
Confidence 9999888764 6899999999987654 2221111 001111111111222223333333332 11111 01
Q ss_pred CCCCCC-----cccC-CCCCcEEEEecCCcCeEEEEeCCCcce--eeEecccccCCCCCCCCCcceeeeeEEEecCCCCC
Q 022870 148 SLCDSK-----DDVP-AEGPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ 219 (291)
Q Consensus 148 ~~~~~~-----~~~~-~~~~~~~~~~g~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 219 (291)
+..... .+|. ++|+.++ ++. +|.|.+.|+.+... ...+.... ..........+....+. ++|++
T Consensus 220 ~~~~~~~~~~~~~~~~~dG~~~~-vs~--~g~V~v~d~~~~~~~v~~~~~~~~--~~~~~~g~~p~g~q~~a-~~~~~-- 291 (386)
T 3sjl_D 220 FHPEDEFLINHPAYSQKAGRLVW-PTY--TGKIHQIDLSSGDAKFLPAVEALT--EAERADGWRPGGWQQVA-YHRAL-- 291 (386)
T ss_dssp CSCTTSCBCSCCEEETTTTEEEE-EBT--TSEEEEEECTTSSCEECCCEESSC--HHHHHTTEEECSSSCEE-EETTT--
T ss_pred eccccccccccceeEcCCCcEEE-EeC--CCEEEEEECCCCcceeecceeccc--cccccccccCCCcceee-ECCCC--
Confidence 111111 3443 5664444 333 58999999976642 22221000 00000000001111233 77763
Q ss_pred CceEEEeec--------CCCcEEEEEccCCCCceeeccccccceeEEEeecCCC-eeEE-ecCCCeEEEEEcCCCceeee
Q 022870 220 GFVNVLAGY--------EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGIS-GGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 220 g~~~l~~g~--------~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s-~s~dg~i~vw~~~~~~~~~~ 289 (291)
++.|++... ..+.|.++|+.+ .+.+..+.. ...+++|+++++++ +|++ ...++.|.++|..+++.+.+
T Consensus 292 ~~lyV~~~~~~~~~hk~~~~~V~viD~~t-~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~ 369 (386)
T 3sjl_D 292 DRIYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRS 369 (386)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CeEEEEeccccccccCCCCCEEEEEECCC-CeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEE
Confidence 332222221 125799999999 888888764 34789999999986 5555 45689999999999999887
Q ss_pred e
Q 022870 290 V 290 (291)
Q Consensus 290 ~ 290 (291)
+
T Consensus 370 i 370 (386)
T 3sjl_D 370 V 370 (386)
T ss_dssp E
T ss_pred e
Confidence 5
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.52 E-value=1.3e-11 Score=97.36 Aligned_cols=200 Identities=13% Similarity=0.022 Sum_probs=121.7
Q ss_pred CCccceeEEEEcCCCCEEEEecCC----CeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeC------C
Q 022870 16 GHRASVTDVCFHQTKPILFAGTTG----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR------D 85 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~------d 85 (291)
.+...+.+++++++|+++++...+ +.|.+||.+++.....+........+.+++++| +++++++... .
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~--~g~l~v~~~~~~~~~~~ 161 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS--KGGFYFTDFRGYSTNPL 161 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT--TSCEEEEECCCBTTBCC
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECC--CCCEEEEeccccccCCC
Confidence 566789999999999888877666 689999988776543333211224589999999 8877776553 2
Q ss_pred CeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEE
Q 022870 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (291)
Q Consensus 86 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
+.|..+|..+++.. .+.. .. ..+.. ++|+|+++.+++
T Consensus 162 ~~l~~~~~~~~~~~-----~~~~---~~--~~~~~---------------------------------i~~~~dg~~l~v 198 (333)
T 2dg1_A 162 GGVYYVSPDFRTVT-----PIIQ---NI--SVANG---------------------------------IALSTDEKVLWV 198 (333)
T ss_dssp EEEEEECTTSCCEE-----EEEE---EE--SSEEE---------------------------------EEECTTSSEEEE
T ss_pred ceEEEEeCCCCEEE-----Eeec---CC--Ccccc---------------------------------eEECCCCCEEEE
Confidence 45655665443221 0000 00 00000 558999876665
Q ss_pred EecCCcCeEEEEeCCC-cceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCc
Q 022870 166 VAGEQLSEVEIWDLNT-AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (291)
Q Consensus 166 ~~g~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (291)
+.+.++.|.+||+++ +.....+...... ... ....+..+. +.++ |. ++++...++.|.+||.. ++.
T Consensus 199 -~~~~~~~i~~~d~~~~g~~~~~~~~~~~~---~~~--~~~~~~~i~-~d~~---G~-l~v~~~~~~~v~~~d~~--g~~ 265 (333)
T 2dg1_A 199 -TETTANRLHRIALEDDGVTIQPFGATIPY---YFT--GHEGPDSCC-IDSD---DN-LYVAMYGQGRVLVFNKR--GYP 265 (333)
T ss_dssp -EEGGGTEEEEEEECTTSSSEEEEEEEEEE---ECC--SSSEEEEEE-EBTT---CC-EEEEEETTTEEEEECTT--SCE
T ss_pred -EeCCCCeEEEEEecCCCcCcccccceEEE---ecC--CCCCCCceE-ECCC---CC-EEEEEcCCCEEEEECCC--CCE
Confidence 344468999999964 3332221100000 000 012445565 8887 54 66666678899999984 566
Q ss_pred eeecccccc------ceeEEEeecCCCeeEEecCC
Q 022870 245 LTAMKVHLE------PVLCLSIDESCNGGISGGAD 273 (291)
Q Consensus 245 ~~~~~~h~~------~v~~~~~~~~~~~l~s~s~d 273 (291)
+..+..+.. .+.+++|++++..|+.++.+
T Consensus 266 ~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 266 IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 666554432 68999999998666655544
No 190
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.52 E-value=2e-12 Score=113.07 Aligned_cols=207 Identities=9% Similarity=-0.020 Sum_probs=125.5
Q ss_pred CccceeEEEEcCCCCEEEEecCC-----CeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCe----
Q 022870 17 HRASVTDVCFHQTKPILFAGTTG-----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT---- 87 (291)
Q Consensus 17 h~~~v~~l~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~---- 87 (291)
|...+..++|||||++||.++.+ .+|++||+.+++.+.. ..+. ..+..++|+| | +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~--~~~~~~~wsp--D-~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKW--VKFSGLAWLG--N-DALLYSRFAEPKEGQ 234 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEE--EESCCCEEST--T-SEEEEEECCCC----
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCC--ceeccEEEEC--C-CEEEEEEecCccccc
Confidence 44578899999999999876543 4699999999887653 2222 1146889999 9 88887776654
Q ss_pred ----------EEEEECCCCCCCCCCccccccce-EEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCccc
Q 022870 88 ----------VKCWDIENGGLSSNPSLTIKTNS-YHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDV 156 (291)
Q Consensus 88 ----------i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (291)
|++|++.++......+....... .... +.|
T Consensus 235 ~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~---------------------------------------~~~ 275 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG---------------------------------------ASV 275 (741)
T ss_dssp ----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE---------------------------------------EEE
T ss_pred ccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE---------------------------------------EEE
Confidence 78888876542111111111000 0000 559
Q ss_pred CCCCCcEEEEecCC---cCeEEEEeCCCc--ceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecC--
Q 022870 157 PAEGPKYMAVAGEQ---LSEVEIWDLNTA--ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE-- 229 (291)
Q Consensus 157 ~~~~~~~~~~~g~~---d~~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~-- 229 (291)
+|+|+.+++.+... ...|++||+.++ ++...+. .+.... ... +.|+ |. .|+..+.
T Consensus 276 SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~--------~~~~~~----~~~--~~~d---g~-~l~~~s~~~ 337 (741)
T 1yr2_A 276 SSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI--------PDLKAQ----WDF--VDGV---GD-QLWFVSGDG 337 (741)
T ss_dssp CTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE--------CSSSSC----EEE--EEEE---TT-EEEEEECTT
T ss_pred CCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec--------CCCCce----EEE--Eecc---CC-EEEEEECCC
Confidence 99998877655432 358999999876 3134444 222211 111 3355 44 4544443
Q ss_pred --CCcEEEEEccCCC-CceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcC-CCcee
Q 022870 230 --DGSILVWDIRNPG-IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD-HSTVS 287 (291)
Q Consensus 230 --dg~i~vwd~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~-~~~~~ 287 (291)
++.|.+||+.++. .....+..+...+.+++|+ ++.++++...|+..++|.++ +++..
T Consensus 338 ~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~ 398 (741)
T 1yr2_A 338 APLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPA 398 (741)
T ss_dssp CTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEE
T ss_pred CCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCce
Confidence 4569999988631 2233334445567778888 55678888889988877654 34433
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.51 E-value=6.1e-12 Score=109.48 Aligned_cols=205 Identities=14% Similarity=0.048 Sum_probs=133.6
Q ss_pred eeEEEEcCCCCEEEEecCCCe----------------EEEEeCCCCeE--EEEEeeecCCcceEEEEEeecCCCCeEEEE
Q 022870 21 VTDVCFHQTKPILFAGTTGGE----------------LRIWDTVQHRT--VSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (291)
Q Consensus 21 v~~l~~~~~~~~l~s~~~dg~----------------v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~ 82 (291)
+..++|+|||+.|+.++.++. |++|++.+++. ...+........+..+.|+| ||++|+.+
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp--Dg~~l~~~ 250 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD--DGRYVLLS 250 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT--TSCEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC--CCCEEEEE
Confidence 678999999999998887765 99999988752 22233322223478999999 99988876
Q ss_pred eC-----CCeEEEEECCC------CCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCC
Q 022870 83 GR-----DGTVKCWDIEN------GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCD 151 (291)
Q Consensus 83 ~~-----dg~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (291)
+. +..|.+||+.+ +..... .+........
T Consensus 251 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~l~~~~~~~~--------------------------------------- 290 (710)
T 2xdw_A 251 IREGCDPVNRLWYCDLQQESNGITGILKWV-KLIDNFEGEY--------------------------------------- 290 (710)
T ss_dssp EECSSSSCCEEEEEEGGGSSSSSCSSCCCE-EEECSSSSCE---------------------------------------
T ss_pred EEccCCCccEEEEEECcccccccCCccceE-EeeCCCCcEE---------------------------------------
Confidence 64 56899999976 321100 0000000000
Q ss_pred CCcccCCCCCcEEEEecC--CcCeEEEEeCCCcce--eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEee
Q 022870 152 SKDDVPAEGPKYMAVAGE--QLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG 227 (291)
Q Consensus 152 ~~~~~~~~~~~~~~~~g~--~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g 227 (291)
..|+|+|..+++.+.. .++.|.+||+.++.. ...+. .+.. ...+..+. |.++ +. ++++.
T Consensus 291 --~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~--------~~~~--~~~~~~~~-~~~~---~~-lv~~~ 353 (710)
T 2xdw_A 291 --DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV--------PEHE--KDVLEWVA-CVRS---NF-LVLCY 353 (710)
T ss_dssp --EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--------CCCS--SCEEEEEE-EETT---TE-EEEEE
T ss_pred --EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc--------CCCC--CCeEEEEE-EEcC---CE-EEEEE
Confidence 1267788877765432 134799999987642 23343 2211 12445565 7754 43 77888
Q ss_pred cCCCc--EEEEEccCCCCceeeccccccceeEEEeecCCCeeE-Ee---cCCCeEEEEEcCCCc
Q 022870 228 YEDGS--ILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI-SG---GADQKIVLYNLDHST 285 (291)
Q Consensus 228 ~~dg~--i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~---s~dg~i~vw~~~~~~ 285 (291)
..++. |++||+.+ ++.+..+..+.+.+..+.+++++..++ +. ...+.|++||+.+++
T Consensus 354 ~~~g~~~l~~~~~~~-g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 354 LHDVKNTLQLHDLAT-GALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EETTEEEEEEEETTT-CCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EECCEEEEEEEECCC-CCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 88874 56677756 666777777788899999999887665 22 235789999998876
No 192
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.47 E-value=6.4e-10 Score=86.10 Aligned_cols=238 Identities=4% Similarity=-0.078 Sum_probs=141.8
Q ss_pred EecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEE
Q 022870 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (291)
Q Consensus 13 ~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd 92 (291)
.+..+...+.+++++++|.+.++...++.|.+||.. ++.. .+........+.++++.+ ++.++++...++.|..||
T Consensus 9 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~~ 84 (299)
T 2z2n_A 9 NLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCLTISS--DGEVWFTENAANKIGRIT 84 (299)
T ss_dssp ECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEEC
T ss_pred cCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-EecCCcccCceeeEEECC--CCCEEEeCCCCCeEEEEC
Confidence 344566789999999999887777778999999987 5543 332221124589999999 888777777788999999
Q ss_pred CCCCCCCCCCccccc--cceEEEEEeecccCccceecc-CCCCceeeecccCccccccCCCC-CC---cccCCCCCcEEE
Q 022870 93 IENGGLSSNPSLTIK--TNSYHFCKLSLVKEPYANAKQ-ANEPKDCYEREVGETVDTDSLCD-SK---DDVPAEGPKYMA 165 (291)
Q Consensus 93 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~ 165 (291)
.. ++.. .+... ........+. ......... .......++. ............ .. +++++++. +++
T Consensus 85 ~~-g~~~---~~~~~~~~~~~~~i~~~--~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v 156 (299)
T 2z2n_A 85 KK-GIIK---EYTLPNPDSAPYGITEG--PNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-LWF 156 (299)
T ss_dssp TT-SCEE---EEECSSTTCCEEEEEEC--TTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-EEE
T ss_pred CC-CcEE---EEeCCCcCCCceeeEEC--CCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-EEE
Confidence 76 2211 11111 1112222222 111122211 1222333333 222111111111 11 78889885 444
Q ss_pred EecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCce
Q 022870 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 245 (291)
Q Consensus 166 ~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~ 245 (291)
+...++.|..||. +++... +... .. ...+..+. +.++ |. +.++...++.|.+||. + ++..
T Consensus 157 -~~~~~~~i~~~~~-~g~~~~-~~~~------~~----~~~~~~i~-~~~~---g~-l~v~~~~~~~i~~~~~-~-g~~~ 216 (299)
T 2z2n_A 157 -TENQNNAIGRITE-SGDITE-FKIP------TP----ASGPVGIT-KGND---DA-LWFVEIIGNKIGRITT-S-GEIT 216 (299)
T ss_dssp -EETTTTEEEEECT-TCCEEE-EECS------ST----TCCEEEEE-ECTT---SS-EEEEETTTTEEEEECT-T-CCEE
T ss_pred -EeCCCCEEEEEcC-CCcEEE-eeCC------CC----CCcceeEE-ECCC---CC-EEEEccCCceEEEECC-C-CcEE
Confidence 3444688999999 555433 2110 11 22345665 8876 54 5666666889999998 5 4432
Q ss_pred e-eccccccceeEEEeecCCCeeEEecCCCeEEEEEcC
Q 022870 246 T-AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (291)
Q Consensus 246 ~-~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~ 282 (291)
. .+..+...+.+++++++|+++++...++.|..||.+
T Consensus 217 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 217 EFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred EEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC
Confidence 2 233345678999999999977777678899999984
No 193
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.46 E-value=1.6e-11 Score=97.41 Aligned_cols=185 Identities=12% Similarity=0.089 Sum_probs=118.0
Q ss_pred eeEEEEcCCCCEEEEecC---------------------------CCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeec
Q 022870 21 VTDVCFHQTKPILFAGTT---------------------------GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73 (291)
Q Consensus 21 v~~l~~~~~~~~l~s~~~---------------------------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 73 (291)
+..++|+|+|+.|+.++. ...|.+||+.+++.+..+.. . . +..+.|+|
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~--~~~~~~sp- 180 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-R--FSSGIWHR- 180 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-T--TCEEEEET-
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-C--cccccCCC-
Confidence 899999999998887763 25799999998877455554 2 3 88999999
Q ss_pred CCCCeEEEEeCCC-------eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccc
Q 022870 74 IGLNKVISQGRDG-------TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT 146 (291)
Q Consensus 74 ~~~~~l~s~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (291)
+| +++++..++ ...+|.+.+++.. .+... . ..
T Consensus 181 -dg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-----~l~~~-~--~~------------------------------- 219 (347)
T 2gop_A 181 -DK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE-----KMFEK-V--SF------------------------------- 219 (347)
T ss_dssp -TE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-----EEEEE-E--SE-------------------------------
T ss_pred -Ce-EEEEEecccccccccccccEEEeCCCceE-----EeccC-c--ce-------------------------------
Confidence 98 777776542 3445544432210 11100 0 00
Q ss_pred cCCCCCCcccCCCCCcEEEEecCC------cCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeee-EEEecCCCCC
Q 022870 147 DSLCDSKDDVPAEGPKYMAVAGEQ------LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMA-VQAYLPSKSQ 219 (291)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~g~~------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~ 219 (291)
..++|+|+.+++.+... ...|.+|| +++.. .+.. .+ ...+.. +. |+ +
T Consensus 220 -------~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~-~l~~-------~~----~~~~~~~~~-~s-d--- 273 (347)
T 2gop_A 220 -------YAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVM-GILD-------EV----DRGVGQAKI-KD-G--- 273 (347)
T ss_dssp -------EEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEE-ESST-------TC----CSEEEEEEE-ET-T---
T ss_pred -------eeECCCCCEEEEEEccccCCccccceEEEEC--CCceE-eccc-------cC----CcccCCccE-Ec-C---
Confidence 11468888776544221 25788888 44433 3321 22 223443 54 87 5
Q ss_pred CceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeE-EEEEcCCCc
Q 022870 220 GFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKI-VLYNLDHST 285 (291)
Q Consensus 220 g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i-~vw~~~~~~ 285 (291)
+ ++++++.++.+++| +.+ ++. ..+..+...|.+++|++ .++++++.++.. .+|.++ ++
T Consensus 274 g--~~~~~~~~~~~~l~-~~~-g~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~ 332 (347)
T 2gop_A 274 K--VYFTLFEEGSVNLY-IWD-GEI-KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE 332 (347)
T ss_dssp E--EEEEEEETTEEEEE-EES-SSE-EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS
T ss_pred c--EEEEEecCCcEEEE-EcC-Cce-EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc
Confidence 4 78888899999999 884 555 34444578899999999 567777766654 777776 54
No 194
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.44 E-value=1.6e-10 Score=93.69 Aligned_cols=209 Identities=12% Similarity=-0.013 Sum_probs=134.0
Q ss_pred cceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC--eEEEEECCCC
Q 022870 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG--TVKCWDIENG 96 (291)
Q Consensus 19 ~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~ 96 (291)
.....|+|+++++++++...++.|++||..++.......... ... ++|++ +++.|+++..++ .|.+|+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~---~~~-ia~~~--~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK---GGK-PAVTK--DKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC---BCB-CEECT--TSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC---CCc-eeEec--CCCcEEEEecCCCceEEEEEcCCC
Confidence 357899999999888888888999999998777665544322 234 99999 888888888766 7888887654
Q ss_pred CCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEE
Q 022870 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEI 176 (291)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~ 176 (291)
.... .+ ...... ....-..++++|++..+++ + ..++.|+.
T Consensus 205 ~~~~----~~-------g~~~~~---------------------------~~~~p~~iav~p~~g~lyv-~-d~~~~I~~ 244 (409)
T 3hrp_A 205 WAPT----RI-------GQLGST---------------------------FSGKIGAVALDETEEWLYF-V-DSNKNFGR 244 (409)
T ss_dssp TCEE----EE-------EECCTT---------------------------SCSCCCBCEECTTSSEEEE-E-CTTCEEEE
T ss_pred ceeE----Ee-------eeccch---------------------------hcCCcEEEEEeCCCCeEEE-E-ECCCcEEE
Confidence 3211 00 000000 0000001778996556665 3 34789999
Q ss_pred EeCCCcceeeEecccccCCCCCCCCCcceeee-eEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccc---
Q 022870 177 WDLNTAERCTRLHQNSCGGSPNFSSKGRGMCM-AVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHL--- 252 (291)
Q Consensus 177 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~--- 252 (291)
||..++... .+... ...+... .... .++ |+|++ +. ++++-..++.|+.|+... . +..+.++.
T Consensus 245 ~d~~~~~~~-~~~~~---~~~g~~~---~~P~~~ia-~~p~~--g~-lyv~d~~~~~I~~~~~~g--~-~~~~~g~~~~~ 310 (409)
T 3hrp_A 245 FNVKTQEVT-LIKQL---ELSGSLG---TNPGPYLI-YYFVD--SN-FYMSDQNLSSVYKITPDG--E-CEWFCGSATQK 310 (409)
T ss_dssp EETTTCCEE-EEEEC---CCCSCCC---CSSCCEEE-EETTT--TE-EEEEETTTTEEEEECTTC--C-EEEEEECTTCC
T ss_pred EECCCCCEE-EEecc---cccCCCC---CCccccEE-EeCCC--CE-EEEEeCCCCEEEEEecCC--C-EEEEEeCCCCC
Confidence 999877532 22100 0001111 0112 565 99952 43 667777889999999763 2 33333322
Q ss_pred ------------cceeEEEeecCCCeeEEec-CCCeEEEEEcCCCcee
Q 022870 253 ------------EPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTVS 287 (291)
Q Consensus 253 ------------~~v~~~~~~~~~~~l~s~s-~dg~i~vw~~~~~~~~ 287 (291)
.....++++++|+++++-+ .++.|+.|++.++++.
T Consensus 311 g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~ 358 (409)
T 3hrp_A 311 TVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS 358 (409)
T ss_dssp SCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE
T ss_pred CcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE
Confidence 3478999999999888888 8999999998777643
No 195
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.44 E-value=3.7e-10 Score=87.71 Aligned_cols=209 Identities=9% Similarity=0.036 Sum_probs=129.6
Q ss_pred ecCCccceeEEEEcCC-CCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEE
Q 022870 14 LRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (291)
Q Consensus 14 l~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd 92 (291)
+..+..---+..|+++ +.++++...++.|..||..+++. ..+.. . ..+.++++++ +++++++ . ++.|.+||
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~-~--~~~~~i~~~~--dG~l~v~-~-~~~l~~~d 79 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTM-D--APVSSVALRQ--SGGYVAT-I-GTKFCALN 79 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEEC-S--SCEEEEEEBT--TSSEEEE-E-TTEEEEEE
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeC-C--CceEEEEECC--CCCEEEE-E-CCeEEEEE
Confidence 3334445567899994 55677778889999999987765 33332 2 4489999999 8885444 4 56899999
Q ss_pred CCCCCCCCCCccccccc---eEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecC
Q 022870 93 IENGGLSSNPSLTIKTN---SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE 169 (291)
Q Consensus 93 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 169 (291)
.++++... +...... ..... ++++|+|+.++...+.
T Consensus 80 ~~~g~~~~--~~~~~~~~~~~~~~d---------------------------------------i~~d~dG~l~~~~~~~ 118 (297)
T 3g4e_A 80 WKEQSAVV--LATVDNDKKNNRFND---------------------------------------GKVDPAGRYFAGTMAE 118 (297)
T ss_dssp TTTTEEEE--EEECCTTCSSEEEEE---------------------------------------EEECTTSCEEEEEEEC
T ss_pred CCCCcEEE--EEecCCCCCCCCCCC---------------------------------------EEECCCCCEEEecCCc
Confidence 88764311 1110000 00000 5588888744322221
Q ss_pred ---------CcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEcc-
Q 022870 170 ---------QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR- 239 (291)
Q Consensus 170 ---------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~- 239 (291)
..+.|..+|.. ++...... .......++ |+|+ ++.++++.+.++.|.+||+.
T Consensus 119 ~~~~~~~~~~~~~l~~~d~~-g~~~~~~~-------------~~~~pngi~-~spd---g~~lyv~~~~~~~i~~~~~d~ 180 (297)
T 3g4e_A 119 ETAPAVLERHQGALYSLFPD-HHVKKYFD-------------QVDISNGLD-WSLD---HKIFYYIDSLSYSVDAFDYDL 180 (297)
T ss_dssp CSBTTBCCTTCEEEEEECTT-SCEEEEEE-------------EESBEEEEE-ECTT---SCEEEEEEGGGTEEEEEEECT
T ss_pred ccccccccCCCcEEEEEECC-CCEEEEee-------------ccccccceE-EcCC---CCEEEEecCCCCcEEEEeccC
Confidence 12345555543 33222222 112345565 9998 54355667778999999984
Q ss_pred -CCCCc-----eeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 240 -NPGIP-----LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 240 -~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+ +.. ...+..+...+.+++++++|++.++...++.|.+||.++++++..+
T Consensus 181 ~~-G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 181 QT-GQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp TT-CCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEE
T ss_pred CC-CcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEE
Confidence 3 332 2233334467889999999998888777889999999988877654
No 196
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.44 E-value=7.9e-14 Score=111.65 Aligned_cols=187 Identities=14% Similarity=0.077 Sum_probs=105.3
Q ss_pred CCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCcccccc
Q 022870 29 TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKT 108 (291)
Q Consensus 29 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 108 (291)
++..+++++.||.|+.||..+|+.+..++. .. +.+..+.. ++..+++++.||.|+.||.++++.... .....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~--~~s~p~~~--~g~~~v~~s~dg~l~a~d~~tG~~~w~--~~~~~ 79 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DP--VLQVPTHV--EEPAFLPDPNDGSLYTLGSKNNEGLTK--LPFTI 79 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CC--SCCCC-------CCEEECTTTCCEEEC-----CCSEE--CSCCH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CC--ceecceEc--CCCEEEEeCCCCEEEEEECCCCceeee--eeccC
Confidence 566899999999999999999999988776 22 55555556 667888889999999999988865431 11110
Q ss_pred ceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEe
Q 022870 109 NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRL 188 (291)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~ 188 (291)
... .... ..+. .+..++ +|+.|+.++.||.++++.+..+
T Consensus 80 ~~~------~~~s--------------------------------p~~~-~~~~v~--~g~~dg~v~a~D~~tG~~~w~~ 118 (369)
T 2hz6_A 80 PEL------VQAS--------------------------------PCRS-SDGILY--MGKKQDIWYVIDLLTGEKQQTL 118 (369)
T ss_dssp HHH------HTTC--------------------------------SCC------CC--CCEEEEEEEEECCC--------
T ss_pred ccc------cccC--------------------------------ceEe-cCCEEE--EEeCCCEEEEEECCCCcEEEEe
Confidence 000 0000 0111 223333 4666899999999999988776
Q ss_pred cccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCC---C
Q 022870 189 HQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESC---N 265 (291)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~---~ 265 (291)
.. +. ... ++|+ +. .+++++.|+.|+.||.++ ++.+..+..+. ....+++++. .
T Consensus 119 ~~--------~~--------~~~-~~p~---~~-~v~~~~~dg~v~a~d~~t-G~~~W~~~~~~--~~~~~~~~~~~~~~ 174 (369)
T 2hz6_A 119 SS--------AF--------ADS-LSPS---TS-LLYLGRTEYTITMYDTKT-RELRWNATYFD--YAASLPEDDVDYKM 174 (369)
T ss_dssp -----------------------------------EEEEEEEEEEECCCSSS-SSCCCEEEEEE--ECCBCCCCCTTCCC
T ss_pred cC--------CC--------ccc-cccc---CC-EEEEEecCCEEEEEECCC-CCEEEeEeccc--ccCccccCCccccc
Confidence 62 21 112 5664 33 788889999999999998 77766655322 2333444432 3
Q ss_pred eeEEecCCCeEEEEEcCCCceee
Q 022870 266 GGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 266 ~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
.++.++.||.|+.||.++++.+-
T Consensus 175 ~v~~~~~dg~v~a~d~~tG~~~W 197 (369)
T 2hz6_A 175 SHFVSNGDGLVVTVDSESGDVLW 197 (369)
T ss_dssp CEEEEETSCEEEEECTTTCCEEE
T ss_pred eEEEECCCCEEEEEECCCCcEEE
Confidence 57778889999999999988763
No 197
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.42 E-value=1.8e-11 Score=106.96 Aligned_cols=85 Identities=9% Similarity=0.004 Sum_probs=64.9
Q ss_pred CCceEEecCCccc-----eeEEEEcCCCCEEEEecCC---------CeEEEEeCCCCeEEEEEeeecCCcceEEEEEeec
Q 022870 8 PDPVAVLRGHRAS-----VTDVCFHQTKPILFAGTTG---------GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS 73 (291)
Q Consensus 8 ~~~~~~l~~h~~~-----v~~l~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 73 (291)
+++...+.+|... ...++|||||++|+.++.+ +.+.+||+.+++... +..+. ..+...+|+|
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~~~--~~~~~~~~SP- 121 (740)
T 4a5s_A 46 GNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EERIP--NNTQWVTWSP- 121 (740)
T ss_dssp CCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SSCCC--TTEEEEEECS-
T ss_pred CceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-cccCC--CcceeeEECC-
Confidence 3455566777543 2347889999999998876 566799999987653 44454 4499999999
Q ss_pred CCCCeEEEEeCCCeEEEEECCCCCC
Q 022870 74 IGLNKVISQGRDGTVKCWDIENGGL 98 (291)
Q Consensus 74 ~~~~~l~s~~~dg~i~iwd~~~~~~ 98 (291)
||+.|+.+. |+.|++||+.+++.
T Consensus 122 -dG~~la~~~-~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 122 -VGHKLAYVW-NNDIYVKIEPNLPS 144 (740)
T ss_dssp -STTCEEEEE-TTEEEEESSTTSCC
T ss_pred -CCCEEEEEE-CCeEEEEECCCCce
Confidence 999998885 68999999987653
No 198
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.39 E-value=9.4e-11 Score=93.03 Aligned_cols=256 Identities=6% Similarity=-0.062 Sum_probs=145.0
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEec----------CCCeEEEEeCCCCeEEEEEeeecCC-----cceEEEEEeec
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVHSAA-----HGIVSVATGPS 73 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~~~-----~~v~~~~~~~~ 73 (291)
+.+.++..-..+ .+.++||+++++.+. .++.|.+||+.+++.+.++...... .....++++|
T Consensus 57 ~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~Sp- 133 (368)
T 1mda_H 57 VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA- 133 (368)
T ss_dssp EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT-
T ss_pred eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcC-
Confidence 445555544445 799999999998875 3789999999999999998764100 1246899999
Q ss_pred CCCCeEEEEeC--CCeEEE--EECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeeccc-----Cccc
Q 022870 74 IGLNKVISQGR--DGTVKC--WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV-----GETV 144 (291)
Q Consensus 74 ~~~~~l~s~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 144 (291)
||++++++.. +..|.+ +|..+ .. ....... ..+.+............+....++... .+..
T Consensus 134 -DGk~lyVan~~~~~~v~V~~iD~~t---v~--~i~v~~~----~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~ 203 (368)
T 1mda_H 134 -SSACLLFFLFGSSAAAGLSVPGASD---DQ--LTKSASC----FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVG 203 (368)
T ss_dssp -TSSCEEEEECSSSCEEEEEETTTEE---EE--EEECSSC----CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECC
T ss_pred -CCCEEEEEccCCCCeEEEEEEchhh---ce--EEECCCc----eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEE
Confidence 9999998864 467888 99876 11 1111100 000111111111112222233334433 1111
Q ss_pred cc---cCC-CCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcc--eeeEecccccCCCCCCCCCcceeeeeEEEecCCCC
Q 022870 145 DT---DSL-CDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAE--RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS 218 (291)
Q Consensus 145 ~~---~~~-~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 218 (291)
.. ... +....+ .+++..++.++ . +.+.+.|..... .+..+.... ...............+. |+|+
T Consensus 204 ~~~t~~i~vg~~P~~-~~~~~~~~~vs-~--~~V~viD~~~~~~~v~~~~~~~~--~~~~~~~~~p~g~~~v~-~s~d-- 274 (368)
T 1mda_H 204 AQCTGAQNCSSQAAQ-ANYPGMLVWAV-A--SSILQGDIPAAGATMKAAIDGNE--SGRKADNFRSAGFQMVA-KLKN-- 274 (368)
T ss_dssp CCSCTTSCBCSCCEE-ETTTTEEEECB-S--SCCEEEECCSSCCEEECCCCSSC--THHHHTTEEECSSSCEE-EETT--
T ss_pred EEeeeeeeCCCCccc-cccCCEEEEEc-C--CEEEEEECCCCcceEEEEEEecc--ccccccccccCcceeeE-EcCC--
Confidence 00 000 111122 55565555433 3 789999987543 222221100 00000000000001133 8888
Q ss_pred CCceEEEee-c---C-----CCcEEEEEccCCCCceeeccccccceeEEEeecCCC-eeEEec-CCCeEEEEEcCCCcee
Q 022870 219 QGFVNVLAG-Y---E-----DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGG-ADQKIVLYNLDHSTVS 287 (291)
Q Consensus 219 ~g~~~l~~g-~---~-----dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s-~dg~i~vw~~~~~~~~ 287 (291)
++ .++++ . . ++.+.++|+.+ .+.+..+.... ...+|+|+++++ ++++.. .++.|.++|+.+.+.+
T Consensus 275 -g~-~lyV~~~~~~~~~~~~~~~~~ViD~~t-~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 275 -TD-GIMILTVEHSRSCLAAAENTSSVTASV-GQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp -TT-EEEEEEEECSSCTTSCEEEEEEEESSS-CCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred -CC-EEEEEeccccCcccccCCCEEEEECCC-CeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 33 34433 2 2 23566999998 78888887543 689999999998 456666 5999999999999998
Q ss_pred eee
Q 022870 288 HCV 290 (291)
Q Consensus 288 ~~~ 290 (291)
.++
T Consensus 351 ~~I 353 (368)
T 1mda_H 351 SSV 353 (368)
T ss_dssp EEC
T ss_pred EEE
Confidence 775
No 199
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.39 E-value=9e-11 Score=92.53 Aligned_cols=126 Identities=14% Similarity=0.116 Sum_probs=84.9
Q ss_pred cccCCCCCcEEEEecCCcCeEEEEeCCCcc-eeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeec-CCC
Q 022870 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY-EDG 231 (291)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~-~dg 231 (291)
++++|+|. +++ +...++.|++||..... .+..+.... ..+...........++ ++|+ +|. ++++.+ .++
T Consensus 96 ia~d~~g~-l~v-~d~~~~~v~~~~~~g~~~~~~~~~~~~---~~g~~~~~~~~P~~ia-~~~~--~g~-lyv~d~~~~~ 166 (329)
T 3fvz_A 96 LSIDTDGN-YWV-TDVALHQVFKLDPHSKEGPLLILGRSM---QPGSDQNHFCQPTDVA-VEPS--TGA-VFVSDGYCNS 166 (329)
T ss_dssp EEECTTSC-EEE-EETTTTEEEEECTTCSSCCSEEESBTT---BCCCSTTCCSSEEEEE-ECTT--TCC-EEEEECSSCC
T ss_pred EEECCCCC-EEE-EECCCCEEEEEeCCCCeEEEEEecccC---CCCCCccccCCCcEEE-EeCC--CCe-EEEEeCCCCC
Confidence 77899987 444 56667999999986543 444443100 0011111223456776 9983 144 666665 689
Q ss_pred cEEEEEccCCCCceeeccc----------cccceeEEEeecC-CCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 232 SILVWDIRNPGIPLTAMKV----------HLEPVLCLSIDES-CNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 232 ~i~vwd~~~~~~~~~~~~~----------h~~~v~~~~~~~~-~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
.|++||.. +..+..+.. +-..+.+|+++|+ +.++++...++.|++|+.++++++..+
T Consensus 167 ~I~~~~~~--g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 167 RIVQFSPS--GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp EEEEECTT--SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred eEEEEcCC--CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 99999943 666666642 2234899999998 888888889999999999988877654
No 200
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.38 E-value=1.8e-11 Score=97.42 Aligned_cols=170 Identities=13% Similarity=0.050 Sum_probs=114.1
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEeCCCCe-----------EEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeE
Q 022870 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHR-----------TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (291)
Q Consensus 20 ~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i 88 (291)
+++.+++++...++++|+.++ +++|++++.+ ...... +. . |+.++| . ++.|+++ .++.|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp--~-V~~l~f-d---~~~L~v~-~~~~l 108 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE-IP--D-VIFVCF-H---GDQVLVS-TRNAL 108 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE-CT--T-EEEEEE-E---TTEEEEE-ESSEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEee-CC--C-eeEEEE-C---CCEEEEE-cCCcE
Confidence 689999999998999999985 6669865322 112222 22 4 999999 4 4888888 88999
Q ss_pred EEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEec
Q 022870 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (291)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 168 (291)
++||+.+..... .......... . +.+.+ +.+++ +
T Consensus 109 ~v~dv~sl~~~~--~~~~~~~~v~--~--------------------------------------i~~~~--p~~av--~ 142 (388)
T 1xip_A 109 YSLDLEELSEFR--TVTSFEKPVF--Q--------------------------------------LKNVN--NTLVI--L 142 (388)
T ss_dssp EEEESSSTTCEE--EEEECSSCEE--E--------------------------------------EEECS--SEEEE--E
T ss_pred EEEEchhhhccC--ccceeeccee--e--------------------------------------EEecC--CCEEE--E
Confidence 999998764211 0000000100 0 11222 23433 3
Q ss_pred CCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCc--ee
Q 022870 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP--LT 246 (291)
Q Consensus 169 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~--~~ 246 (291)
..||.|.+||+.+++... + ...+.+++ |+|. | ++.|..||.+++|+... ... ..
T Consensus 143 ~~dG~L~v~dl~~~~~~~-~---------------~~~Vs~v~-WSpk---G---~~vg~~dg~i~~~~~~~-~~~~~k~ 198 (388)
T 1xip_A 143 NSVNDLSALDLRTKSTKQ-L---------------AQNVTSFD-VTNS---Q---LAVLLKDRSFQSFAWRN-GEMEKQF 198 (388)
T ss_dssp ETTSEEEEEETTTCCEEE-E---------------EESEEEEE-ECSS---E---EEEEETTSCEEEEEEET-TEEEEEE
T ss_pred ECCCCEEEEEccCCcccc-c---------------cCCceEEE-EcCC---c---eEEEEcCCcEEEEcCCC-ccccccc
Confidence 458999999999877543 2 22467776 9998 3 67788999999998886 442 33
Q ss_pred ec------c---ccccceeEEEeecCCCeeEE
Q 022870 247 AM------K---VHLEPVLCLSIDESCNGGIS 269 (291)
Q Consensus 247 ~~------~---~h~~~v~~~~~~~~~~~l~s 269 (291)
.+ . +|...|.+|.|.+++.++++
T Consensus 199 ~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 199 EFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred eecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 44 2 47789999999999998876
No 201
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.38 E-value=1.1e-10 Score=91.99 Aligned_cols=219 Identities=10% Similarity=-0.100 Sum_probs=134.7
Q ss_pred cCCCeEEEEeCCCCeEEEEEee----ecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCccccc-cceE
Q 022870 37 TTGGELRIWDTVQHRTVSSSWV----HSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIK-TNSY 111 (291)
Q Consensus 37 ~~dg~v~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~ 111 (291)
+.++.|.++|.++++....+.. ..-......+.+.. +..+++...++.|.+||..+++... ++. ....
T Consensus 14 ~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~---~~lyv~~~~~~~v~viD~~t~~~~~----~i~~~~~p 86 (328)
T 3dsm_A 14 YSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD---GIGWIVVNNSHVIFAIDINTFKEVG----RITGFTSP 86 (328)
T ss_dssp SCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET---TEEEEEEGGGTEEEEEETTTCCEEE----EEECCSSE
T ss_pred CCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC---CEEEEEEcCCCEEEEEECcccEEEE----EcCCCCCC
Confidence 3489999999999887654311 01002257777754 3566667778999999999887643 221 1122
Q ss_pred EEEEeecccCccceecc-CCCCceeeecccCccccccCCCC------CC--cccCCCCCcEEEEecCCcCeEEEEeCCCc
Q 022870 112 HFCKLSLVKEPYANAKQ-ANEPKDCYEREVGETVDTDSLCD------SK--DDVPAEGPKYMAVAGEQLSEVEIWDLNTA 182 (291)
Q Consensus 112 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~g~~d~~i~~wd~~~~ 182 (291)
....++... ...... ....+..++............+. .. +++ ++..++++....++.|.++|+.++
T Consensus 87 ~~i~~~~~g--~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 87 RYIHFLSDE--KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETD 162 (328)
T ss_dssp EEEEEEETT--EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTT
T ss_pred cEEEEeCCC--eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCC
Confidence 222232222 222222 34555666666554332211111 11 666 455666543224789999999999
Q ss_pred ceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCC----------CcEEEEEccCCCCceeecccc-
Q 022870 183 ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED----------GSILVWDIRNPGIPLTAMKVH- 251 (291)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d----------g~i~vwd~~~~~~~~~~~~~h- 251 (291)
+....+.. + .....+. +.|+ |+ +++++..+ +.|.++|..+ ++....+...
T Consensus 163 ~~~~~i~~-------g------~~p~~i~-~~~d---G~-l~v~~~~~~~~~~~~~~~~~v~~id~~t-~~v~~~~~~~~ 223 (328)
T 3dsm_A 163 KVVDELTI-------G------IQPTSLV-MDKY---NK-MWTITDGGYEGSPYGYEAPSLYRIDAET-FTVEKQFKFKL 223 (328)
T ss_dssp EEEEEEEC-------S------SCBCCCE-ECTT---SE-EEEEBCCBCTTCSSCBCCCEEEEEETTT-TEEEEEEECCT
T ss_pred eEEEEEEc-------C------CCccceE-EcCC---CC-EEEEECCCccCCccccCCceEEEEECCC-CeEEEEEecCC
Confidence 88877762 1 1123444 8887 55 55555444 7899999987 6666555432
Q ss_pred ccceeEEEeecCCCeeEEecCCCeEEEEEcCCCcee
Q 022870 252 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVS 287 (291)
Q Consensus 252 ~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~ 287 (291)
...+..++++|+++.|..+.. .|.+||..++++.
T Consensus 224 g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 224 GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVP 257 (328)
T ss_dssp TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCC
T ss_pred CCCceeEEEecCCCEEEEEcc--EEEEEECCCCcee
Confidence 236899999999888877654 8999999988764
No 202
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.37 E-value=8.8e-11 Score=101.86 Aligned_cols=205 Identities=10% Similarity=0.069 Sum_probs=124.8
Q ss_pred CCccceeEEEEcCCCCEEEE-----ecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC----
Q 022870 16 GHRASVTDVCFHQTKPILFA-----GTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG---- 86 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s-----~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg---- 86 (291)
+|...+..++|||||++||- |+.+.+|++||+.+++.+.. .... .....++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~--~k~~~~~Ws---Dg~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKD--VKFSGISWL---GNEGFFYSSYDKPDGS 199 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEE--EESCCCEEE---TTTEEEEEESSCCC--
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCC--ceeccEEEe---CCCEEEEEEecCcccc
Confidence 45667889999999998883 44446899999999986543 1111 012466787 346777666663
Q ss_pred ---------eEEEEECCCCCCCCCCcccccc-ceE-EEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcc
Q 022870 87 ---------TVKCWDIENGGLSSNPSLTIKT-NSY-HFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDD 155 (291)
Q Consensus 87 ---------~i~iwd~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (291)
.|++|++.+.......++.... ... ... +.
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~---------------------------------------~~ 240 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVG---------------------------------------AT 240 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEE---------------------------------------EE
T ss_pred cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEE---------------------------------------EE
Confidence 3888998776432211222211 110 000 44
Q ss_pred cCCCCCcEEEEecC--CcCeEEEEeCCCcc-eeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecC---
Q 022870 156 VPAEGPKYMAVAGE--QLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE--- 229 (291)
Q Consensus 156 ~~~~~~~~~~~~g~--~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~--- 229 (291)
++|+|+.+++.... .+..|+++|+.++. ....+. .+....... ++++ |..+++....
T Consensus 241 ~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~--------~~~~~~~~~------~~~~---g~~l~~~t~~~~~ 303 (693)
T 3iuj_A 241 VTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ--------GDLDADVSL------VDNK---GSTLYLLTNRDAP 303 (693)
T ss_dssp ECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE--------CSSSSCEEE------EEEE---TTEEEEEECTTCT
T ss_pred EcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe--------CCCCceEEE------Eecc---CCEEEEEECCCCC
Confidence 89999988765442 23589999998764 344444 222211111 4444 3325555544
Q ss_pred CCcEEEEEccCCCCc--eeeccccccceeEEEeecCCCeeEEecCC-C--eEEEEEcCCCc
Q 022870 230 DGSILVWDIRNPGIP--LTAMKVHLEPVLCLSIDESCNGGISGGAD-Q--KIVLYNLDHST 285 (291)
Q Consensus 230 dg~i~vwd~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~s~d-g--~i~vw~~~~~~ 285 (291)
.+.|..+|+.+ +.. ...+..|...+. .|+++++.|+....+ + .|++|+++.+.
T Consensus 304 ~~~l~~~d~~~-~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~ 361 (693)
T 3iuj_A 304 NRRLVTVDAAN-PGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR 361 (693)
T ss_dssp TCEEEEEETTS-CCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE
T ss_pred CCEEEEEeCCC-CCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe
Confidence 36899999987 433 345666666665 788888887766554 3 68999988654
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.37 E-value=4.6e-09 Score=81.22 Aligned_cols=236 Identities=7% Similarity=-0.030 Sum_probs=135.6
Q ss_pred CccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCC
Q 022870 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96 (291)
Q Consensus 17 h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 96 (291)
+...+.+++++++|.+.++...++.|..||.. ++. ..+........+.++++.+ ++.++++...++.|..||. ++
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~d~-~g 129 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGP--NGDIWFTEMNGNRIGRITD-DG 129 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECT-TC
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECC--CCCEEEEecCCceEEEECC-CC
Confidence 45678999999999888887778899999976 433 2333221123489999999 8877777777889999998 44
Q ss_pred CCCCCCccccc--cceEEEEEeecccCccceecc-CCCCceeeecccCccccccCCCCC-C---cccCCCCCcEEEEecC
Q 022870 97 GLSSNPSLTIK--TNSYHFCKLSLVKEPYANAKQ-ANEPKDCYEREVGETVDTDSLCDS-K---DDVPAEGPKYMAVAGE 169 (291)
Q Consensus 97 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~g~ 169 (291)
+... .... ........+.. ........ .......++. ............. . +++++++. +++ +..
T Consensus 130 ~~~~---~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v-~~~ 201 (299)
T 2z2n_A 130 KIRE---YELPNKGSYPSFITLGS--DNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWF-VEI 201 (299)
T ss_dssp CEEE---EECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEE-EET
T ss_pred CEEE---ecCCCCCCCCceEEEcC--CCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEE-Ecc
Confidence 3211 1111 11112222221 11112111 1223333333 2222111111111 1 88889886 444 343
Q ss_pred CcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCce-eec
Q 022870 170 QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL-TAM 248 (291)
Q Consensus 170 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~-~~~ 248 (291)
.++.|.+||. +++.. .+... . ....+.++. +.++ |+ ++++...++.|..||.. +... ..+
T Consensus 202 ~~~~i~~~~~-~g~~~-~~~~~------~----~~~~~~~i~-~~~~---g~-l~v~~~~~~~i~~~d~~--g~~~~~~~ 262 (299)
T 2z2n_A 202 IGNKIGRITT-SGEIT-EFKIP------T----PNARPHAIT-AGAG---ID-LWFTEWGANKIGRLTSN--NIIEEYPI 262 (299)
T ss_dssp TTTEEEEECT-TCCEE-EEECS------S----TTCCEEEEE-ECST---TC-EEEEETTTTEEEEEETT--TEEEEEEC
T ss_pred CCceEEEECC-CCcEE-EEECC------C----CCCCceeEE-ECCC---CC-EEEeccCCceEEEECCC--CceEEEeC
Confidence 4688999999 66533 23210 1 123456666 8877 54 55665578899999983 4322 123
Q ss_pred cccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCce
Q 022870 249 KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 249 ~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~ 286 (291)
..+...+.++++ +++.+.++.+ .+.+..++.+++++
T Consensus 263 ~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~~ 298 (299)
T 2z2n_A 263 QIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDNM 298 (299)
T ss_dssp SSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC----
T ss_pred CCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCcccC
Confidence 344567899999 8888777665 56788888877643
No 204
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.36 E-value=3.8e-09 Score=83.08 Aligned_cols=198 Identities=9% Similarity=0.001 Sum_probs=120.9
Q ss_pred ceeEEEEcCC-CCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCC
Q 022870 20 SVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98 (291)
Q Consensus 20 ~v~~l~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 98 (291)
-..+.+|+|+ +.++++...++.|..||..+++.. .+.. . ..+.++++.+ +++++++. .+ .|.+||..+++.
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~-~--~~v~~i~~~~--dg~l~v~~-~~-gl~~~d~~~g~~ 121 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHAL-P--FMGSALAKIS--DSKQLIAS-DD-GLFLRDTATGVL 121 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC-S--SCEEEEEEEE--TTEEEEEE-TT-EEEEEETTTCCE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEC-C--CcceEEEEeC--CCeEEEEE-CC-CEEEEECCCCcE
Confidence 3467899996 556677778899999998877643 3332 2 3499999999 87766654 44 499999877653
Q ss_pred CCCCcccccc---ceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecC-----C
Q 022870 99 SSNPSLTIKT---NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE-----Q 170 (291)
Q Consensus 99 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~ 170 (291)
.. ...... ...... ++++|+|.. ++++.. .
T Consensus 122 ~~--~~~~~~~~~~~~~~~---------------------------------------i~~d~~G~l-~v~~~~~~~~~~ 159 (326)
T 2ghs_A 122 TL--HAELESDLPGNRSND---------------------------------------GRMHPSGAL-WIGTMGRKAETG 159 (326)
T ss_dssp EE--EECSSTTCTTEEEEE---------------------------------------EEECTTSCE-EEEEEETTCCTT
T ss_pred EE--EeeCCCCCCCCCCCC---------------------------------------EEECCCCCE-EEEeCCCcCCCC
Confidence 11 100000 000000 558888864 433321 1
Q ss_pred cCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEcc--CCC-Cc---
Q 022870 171 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR--NPG-IP--- 244 (291)
Q Consensus 171 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~--~~~-~~--- 244 (291)
.+.|..+| +++.. .+.. . ......+. |+|+ |+.++++.+.++.|.+||+. + + ..
T Consensus 160 ~~~l~~~~--~g~~~-~~~~-------~-----~~~~~~i~-~s~d---g~~lyv~~~~~~~I~~~d~~~~~-Gl~~~~~ 219 (326)
T 2ghs_A 160 AGSIYHVA--KGKVT-KLFA-------D-----ISIPNSIC-FSPD---GTTGYFVDTKVNRLMRVPLDART-GLPTGKA 219 (326)
T ss_dssp CEEEEEEE--TTEEE-EEEE-------E-----ESSEEEEE-ECTT---SCEEEEEETTTCEEEEEEBCTTT-CCBSSCC
T ss_pred ceEEEEEe--CCcEE-EeeC-------C-----CcccCCeE-EcCC---CCEEEEEECCCCEEEEEEccccc-CCcccCc
Confidence 24566666 44432 2221 0 11234565 9998 44244555678899999986 4 3 21
Q ss_pred --eeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceee
Q 022870 245 --LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 245 --~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
...+......+.+++++++|++.++...++.|.+|+. +++.+.
T Consensus 220 ~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~ 264 (326)
T 2ghs_A 220 EVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIA 264 (326)
T ss_dssp EEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEE
T ss_pred eEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEE
Confidence 2223333456788999999987777766789999998 455544
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.33 E-value=1.4e-08 Score=78.52 Aligned_cols=235 Identities=7% Similarity=-0.046 Sum_probs=140.2
Q ss_pred CCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCC
Q 022870 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 95 (291)
.....+.++++.++|.+.++...++.|.+||.. ++... +........+.++++.+ ++.++++...++.|..||..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSS--LGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECTT-
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECC--CCCEEEEecCCCeEEEECCC-
Confidence 345678999999999888887778999999987 55443 32222224489999998 87777777668899999987
Q ss_pred CCCCCCCccccc--cceEEEEEeecccCccceeccC-CCCceeeecccCccccccCCCC-CC---cccCCCCCcEEEEec
Q 022870 96 GGLSSNPSLTIK--TNSYHFCKLSLVKEPYANAKQA-NEPKDCYEREVGETVDTDSLCD-SK---DDVPAEGPKYMAVAG 168 (291)
Q Consensus 96 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~g 168 (291)
++.. .+... ........+. .......... ......++.. ........... .. +++++++. +++ +.
T Consensus 92 g~~~---~~~~~~~~~~~~~i~~~--~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v-~~ 163 (300)
T 2qc5_A 92 GGFT---EYPLPQPDSGPYGITEG--LNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWF-TE 163 (300)
T ss_dssp SCEE---EEECSSTTCCEEEEEEC--STTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEE-EE
T ss_pred CCeE---EecCCCCCCCCccceEC--CCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEE-Ee
Confidence 4331 11111 1112222222 1111222111 2223333333 22221112211 11 78889887 444 34
Q ss_pred CCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCcee-e
Q 022870 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT-A 247 (291)
Q Consensus 169 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~-~ 247 (291)
..++.|..||. +++... +... .. ...+..+. +.++ |. +.++....+.|.+||. + +.... .
T Consensus 164 ~~~~~i~~~~~-~g~~~~-~~~~------~~----~~~~~~i~-~d~~---g~-l~v~~~~~~~i~~~~~-~-g~~~~~~ 224 (300)
T 2qc5_A 164 NQNNSIGRITN-TGKLEE-YPLP------TN----AAAPVGIT-SGND---GA-LWFVEIMGNKIGRITT-T-GEISEYD 224 (300)
T ss_dssp TTTTEEEEECT-TCCEEE-EECS------ST----TCCEEEEE-ECTT---SS-EEEEETTTTEEEEECT-T-CCEEEEE
T ss_pred cCCCeEEEECC-CCcEEE-eeCC------CC----CCCcceEE-ECCC---CC-EEEEccCCCEEEEEcC-C-CcEEEEE
Confidence 44678999998 554432 3210 11 22355665 8876 54 5666666778999998 3 44332 2
Q ss_pred ccccccceeEEEeecCCCeeEEecCCCeEEEEEcC
Q 022870 248 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (291)
Q Consensus 248 ~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~ 282 (291)
+..+...+.++++++++++.++...++.|..|+.+
T Consensus 225 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 225 IPTPNARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp CSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred CCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 33345678999999999977777677899999984
No 206
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.33 E-value=3.2e-10 Score=88.38 Aligned_cols=236 Identities=8% Similarity=-0.012 Sum_probs=131.9
Q ss_pred ceEEecCCccceeEEEEcCCCC-EEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeE
Q 022870 10 PVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (291)
Q Consensus 10 ~~~~l~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i 88 (291)
.+..+..+........|+|+++ +++++..++.|..|+. +++ ...+..+. ..+..+++.+ +|+++++...++.|
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~--~~~~gl~~d~--dG~l~v~~~~~~~v 109 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDAT--AFTNGNAVDA--QQRLVHCEHGRRAI 109 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESC--SCEEEEEECT--TSCEEEEETTTTEE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCC--CccceeeECC--CCCEEEEECCCCEE
Confidence 3445555556678899999988 6778888999999997 454 33444444 3389999999 88866665566889
Q ss_pred EEEECCCCCCCCCCccccccce----EEEEEeecccCccceec-----cC-----------CCCceeeeccc--Cccccc
Q 022870 89 KCWDIENGGLSSNPSLTIKTNS----YHFCKLSLVKEPYANAK-----QA-----------NEPKDCYEREV--GETVDT 146 (291)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-----~~-----------~~~~~~~~~~~--~~~~~~ 146 (291)
.+|+.. ++... ........ .....+... ...... .. .....++.++. ......
T Consensus 110 ~~~~~~-g~~~~--~~~~~~~~~~~~~~~i~~d~d--G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~ 184 (305)
T 3dr2_A 110 TRSDAD-GQAHL--LVGRYAGKRLNSPNDLIVARD--GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM 184 (305)
T ss_dssp EEECTT-SCEEE--EECEETTEECSCCCCEEECTT--SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE
T ss_pred EEECCC-CCEEE--EEeccCCCccCCCCCEEECCC--CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE
Confidence 999976 33211 10000000 001111111 111110 00 01123444433 221111
Q ss_pred c-CCCCCCcccCCCCCcEEEEecCC----cCeEEEEeCCCccee--eEecccccCCCCCCCCCcceeeeeEEEecCCCCC
Q 022870 147 D-SLCDSKDDVPAEGPKYMAVAGEQ----LSEVEIWDLNTAERC--TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ 219 (291)
Q Consensus 147 ~-~~~~~~~~~~~~~~~~~~~~g~~----d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 219 (291)
. +.....++|+|+++.++++.... ++.|.+||+...... ..+.. . ..+....+. +.++
T Consensus 185 ~~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~-------~----~~~~pdgi~-~d~~--- 249 (305)
T 3dr2_A 185 ADLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFAS-------V----PDGLPDGFC-VDRG--- 249 (305)
T ss_dssp EEESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEEC-------C----SSSCCCSEE-ECTT---
T ss_pred ecCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEE-------C----CCCCCCeEE-ECCC---
Confidence 1 11111189999998776543221 268999998765411 11110 0 011223444 7776
Q ss_pred CceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEE
Q 022870 220 GFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIV 277 (291)
Q Consensus 220 g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~ 277 (291)
|. |.+++.+ .|.+||.. ++.+..+..+. .+.+++|+++++.|..++.++..+
T Consensus 250 G~--lwv~~~~-gv~~~~~~--g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 250 GW--LWSSSGT-GVCVFDSD--GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp SC--EEECCSS-EEEEECTT--SCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred CC--EEEecCC-cEEEECCC--CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 54 4444444 49999985 67777776554 589999999988887777665433
No 207
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.33 E-value=1e-09 Score=82.58 Aligned_cols=210 Identities=8% Similarity=-0.015 Sum_probs=136.5
Q ss_pred ceEEecCCccc--eeEEEEcCCCCEEEEecC--CCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC
Q 022870 10 PVAVLRGHRAS--VTDVCFHQTKPILFAGTT--GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (291)
Q Consensus 10 ~~~~l~~h~~~--v~~l~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (291)
.+.++. |... ...++|++++.+.++.+. ++.|.+.|+.+++.+..+...... ....+++.. + ...++.-.+
T Consensus 11 vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~-fgeGi~~~g--~-~lyv~t~~~ 85 (266)
T 2iwa_A 11 VLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY-FGEGLTLLN--E-KLYQVVWLK 85 (266)
T ss_dssp EEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC-CEEEEEEET--T-EEEEEETTC
T ss_pred EEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc-ceEEEEEeC--C-EEEEEEecC
Confidence 345553 5533 579999998755555443 689999999999999887654321 234555543 2 444455568
Q ss_pred CeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEE
Q 022870 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (291)
Q Consensus 86 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
+.+.++|..+.+... ++... .... ..++++|..+++
T Consensus 86 ~~v~viD~~t~~v~~----~i~~g-------~~~g---------------------------------~glt~Dg~~l~v 121 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIK----NFTHQ-------MKDG---------------------------------WGLATDGKILYG 121 (266)
T ss_dssp SEEEEEETTTTEEEE----EEECC-------SSSC---------------------------------CEEEECSSSEEE
T ss_pred CEEEEEECCCCcEEE----EEECC-------CCCe---------------------------------EEEEECCCEEEE
Confidence 899999999876533 11111 0000 336678888886
Q ss_pred EecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCce
Q 022870 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 245 (291)
Q Consensus 166 ~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~ 245 (291)
+.+ ++.|.++|..+.+.+..+.. +.....-.....+. |. + |+ ..+....++.|.+.|..+ ++.+
T Consensus 122 s~g--s~~l~viD~~t~~v~~~I~V-------g~~~~p~~~~nele-~~-d---g~-lyvn~~~~~~V~vID~~t-g~V~ 185 (266)
T 2iwa_A 122 SDG--TSILYEIDPHTFKLIKKHNV-------KYNGHRVIRLNELE-YI-N---GE-VWANIWQTDCIARISAKD-GTLL 185 (266)
T ss_dssp ECS--SSEEEEECTTTCCEEEEEEC-------EETTEECCCEEEEE-EE-T---TE-EEEEETTSSEEEEEETTT-CCEE
T ss_pred ECC--CCeEEEEECCCCcEEEEEEE-------CCCCcccccceeEE-EE-C---CE-EEEecCCCCeEEEEECCC-CcEE
Confidence 543 68999999999988887763 11000111234454 65 3 54 455555688999999998 8877
Q ss_pred eecccc-------------ccceeEEEeecCCC-eeEEecCCCeEEEEEcCCC
Q 022870 246 TAMKVH-------------LEPVLCLSIDESCN-GGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 246 ~~~~~h-------------~~~v~~~~~~~~~~-~l~s~s~dg~i~vw~~~~~ 284 (291)
..+... ....++|+|+|+++ +++++...+.+.+-++...
T Consensus 186 ~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 186 GWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 776531 13568999999876 5567777889988887653
No 208
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.32 E-value=5.6e-10 Score=86.05 Aligned_cols=196 Identities=10% Similarity=0.055 Sum_probs=113.5
Q ss_pred CccceeEEEE-cCCCCEEEEecC-CCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECC
Q 022870 17 HRASVTDVCF-HQTKPILFAGTT-GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94 (291)
Q Consensus 17 h~~~v~~l~~-~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 94 (291)
|...+.++++ .+++.++++... ++.|.+|| .+++.+..+..... ..+.++++.| +++++++...++.|.+||..
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~-~~~~~i~~~~--~g~l~v~~~~~~~i~~~~~~ 150 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATIL-QHPRGVTVDN--KGRIIVVECKVMRVIIFDQN 150 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTC-SCEEEEEECT--TSCEEEEETTTTEEEEECTT
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccC-CCceEEEEeC--CCCEEEEECCCCEEEEEcCC
Confidence 4567899999 577766666643 88999999 56777766643221 3489999999 88877787788999999965
Q ss_pred CCCCCCCCccc--cccceEEEEEeecccCccceec-cCCCCceeeecccCccccccCCCC-CC---cccCCCCCcEEEEe
Q 022870 95 NGGLSSNPSLT--IKTNSYHFCKLSLVKEPYANAK-QANEPKDCYEREVGETVDTDSLCD-SK---DDVPAEGPKYMAVA 167 (291)
Q Consensus 95 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~ 167 (291)
.. ... .+. ..........+... ...... .....+..++............++ .. ++++++|. +++ +
T Consensus 151 g~-~~~--~~~~~~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v-~ 223 (286)
T 1q7f_A 151 GN-VLH--KFGCSKHLEFPNGVVVNDK--QEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGE-ILI-A 223 (286)
T ss_dssp SC-EEE--EEECTTTCSSEEEEEECSS--SEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCC-EEE-E
T ss_pred CC-EEE--EeCCCCccCCcEEEEECCC--CCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCC-EEE-E
Confidence 32 211 111 01111222222221 111111 122334444443221111111221 11 89999985 444 3
Q ss_pred cCCcC-eEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccC
Q 022870 168 GEQLS-EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (291)
Q Consensus 168 g~~d~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~ 240 (291)
...++ .|.+||.. ++.+..+.. +.. ...+.+++ +.|+ |+ ++++ +.++.|++|++..
T Consensus 224 ~~~~~~~i~~~~~~-g~~~~~~~~--------~~~--~~~~~~i~-~~~~---g~-l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 224 DNHNNFNLTIFTQD-GQLISALES--------KVK--HAQCFDVA-LMDD---GS-VVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp ECSSSCEEEEECTT-SCEEEEEEE--------SSC--CSCEEEEE-EETT---TE-EEEE-ETTTEEEEEECSC
T ss_pred eCCCCEEEEEECCC-CCEEEEEcc--------cCC--CCcceeEE-ECCC---Cc-EEEE-CCCCeEEEEEccc
Confidence 44454 99999964 566666652 211 12355676 9987 54 5555 5689999999875
No 209
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.31 E-value=6.1e-11 Score=94.39 Aligned_cols=149 Identities=7% Similarity=0.013 Sum_probs=100.7
Q ss_pred ceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCC-----C--CCCccccccceEEEEEeecccCccceeccCCCCceee
Q 022870 64 GIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL-----S--SNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCY 136 (291)
Q Consensus 64 ~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (291)
++..+++++ ...++++|+.++ +.+|++..... . .++..........
T Consensus 39 ~~nlLais~--~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~------------------------ 91 (388)
T 1xip_A 39 SLQNLDISN--SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPDVI------------------------ 91 (388)
T ss_dssp CCBCEEEET--TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTTEE------------------------
T ss_pred cccEEEEcC--CCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCCee------------------------
Confidence 489999999 888999999885 66699764320 0 0000000000000
Q ss_pred ecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCC
Q 022870 137 EREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPS 216 (291)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 216 (291)
.++| ++..+++ + .++.|++||+++........ .|.. .+.++. +.+.
T Consensus 92 ----------------~l~f--d~~~L~v-~--~~~~l~v~dv~sl~~~~~~~--------~~~~----~v~~i~-~~~p 137 (388)
T 1xip_A 92 ----------------FVCF--HGDQVLV-S--TRNALYSLDLEELSEFRTVT--------SFEK----PVFQLK-NVNN 137 (388)
T ss_dssp ----------------EEEE--ETTEEEE-E--ESSEEEEEESSSTTCEEEEE--------ECSS----CEEEEE-ECSS
T ss_pred ----------------EEEE--CCCEEEE-E--cCCcEEEEEchhhhccCccc--------eeec----ceeeEE-ecCC
Confidence 0567 6655543 3 57999999998876555444 3322 234554 5443
Q ss_pred CCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCce
Q 022870 217 KSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 217 ~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~ 286 (291)
.+++++.||.|.+||+.+ +.... +...|++++|+|+| ++.|..||.+++|+.+.+.+
T Consensus 138 ------~~av~~~dG~L~v~dl~~-~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~ 194 (388)
T 1xip_A 138 ------TLVILNSVNDLSALDLRT-KSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEM 194 (388)
T ss_dssp ------EEEEEETTSEEEEEETTT-CCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEE
T ss_pred ------CEEEEECCCCEEEEEccC-Ccccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccc
Confidence 488889999999999997 54432 45689999999999 57788999999999888775
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.30 E-value=3.4e-09 Score=82.22 Aligned_cols=191 Identities=11% Similarity=0.035 Sum_probs=117.7
Q ss_pred CccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeec--CCcceEEEEEeecCCCCeEEEEeCC---------
Q 022870 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS--AAHGIVSVATGPSIGLNKVISQGRD--------- 85 (291)
Q Consensus 17 h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~~~d--------- 85 (291)
+...+.+++++++|+++++. ++.|.+||.++++......... ....+..+++.| +|+++++...+
T Consensus 52 ~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~--dG~l~~~~~~~~~~~~~~~~ 127 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDP--AGRYFAGTMAEETAPAVLER 127 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECT--TSCEEEEEEECCSBTTBCCT
T ss_pred CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECC--CCCEEEecCCcccccccccC
Confidence 35678999999999855543 5679999998876543332211 113478999999 88866654322
Q ss_pred CeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEE
Q 022870 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (291)
Q Consensus 86 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
..-.+|.+....... ... .....+.. ++|+|+++.+++
T Consensus 128 ~~~~l~~~d~~g~~~----~~~-----~~~~~png---------------------------------i~~spdg~~lyv 165 (297)
T 3g4e_A 128 HQGALYSLFPDHHVK----KYF-----DQVDISNG---------------------------------LDWSLDHKIFYY 165 (297)
T ss_dssp TCEEEEEECTTSCEE----EEE-----EEESBEEE---------------------------------EEECTTSCEEEE
T ss_pred CCcEEEEEECCCCEE----EEe-----eccccccc---------------------------------eEEcCCCCEEEE
Confidence 233455544321100 000 00000000 669999987765
Q ss_pred EecCCcCeEEEEeC--CCccee--eEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCC
Q 022870 166 VAGEQLSEVEIWDL--NTAERC--TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 241 (291)
Q Consensus 166 ~~g~~d~~i~~wd~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~ 241 (291)
+.+.++.|.+||+ .++... ..+.. . ....+....+. +.++ |. +.++...++.|..||..+
T Consensus 166 -~~~~~~~i~~~~~d~~~G~~~~~~~~~~--------~-~~~~~~p~g~~-~d~~---G~-lwva~~~~~~v~~~d~~t- 229 (297)
T 3g4e_A 166 -IDSLSYSVDAFDYDLQTGQISNRRSVYK--------L-EKEEQIPDGMC-IDAE---GK-LWVACYNGGRVIRLDPVT- 229 (297)
T ss_dssp -EEGGGTEEEEEEECTTTCCEEEEEEEEE--------C-CGGGCEEEEEE-EBTT---SC-EEEEEETTTEEEEECTTT-
T ss_pred -ecCCCCcEEEEeccCCCCcccCcEEEEE--------C-CCCCCCCCeeE-ECCC---CC-EEEEEcCCCEEEEEcCCC-
Confidence 4555789999987 455431 11210 0 00123455665 8877 54 666666778899999987
Q ss_pred CCceeeccccccceeEEEee-cCCCeeEE
Q 022870 242 GIPLTAMKVHLEPVLCLSID-ESCNGGIS 269 (291)
Q Consensus 242 ~~~~~~~~~h~~~v~~~~~~-~~~~~l~s 269 (291)
++.+..+..+...+++++|. |+++.|..
T Consensus 230 G~~~~~i~~p~~~~t~~~f~g~d~~~L~v 258 (297)
T 3g4e_A 230 GKRLQTVKLPVDKTTSCCFGGKNYSEMYV 258 (297)
T ss_dssp CCEEEEEECSSSBEEEEEEESGGGCEEEE
T ss_pred ceEEEEEECCCCCceEEEEeCCCCCEEEE
Confidence 78888888777789999997 77766543
No 211
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.28 E-value=2.3e-10 Score=99.37 Aligned_cols=194 Identities=8% Similarity=-0.020 Sum_probs=115.0
Q ss_pred cCCCCEEEEecCCC-----eEEEEeCCCCeEEEEEeeec----CCcceEEEEEeecCCCCeEE-----EEeCCCeEEEEE
Q 022870 27 HQTKPILFAGTTGG-----ELRIWDTVQHRTVSSSWVHS----AAHGIVSVATGPSIGLNKVI-----SQGRDGTVKCWD 92 (291)
Q Consensus 27 ~~~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~l~-----s~~~dg~i~iwd 92 (291)
+|+|.+++....++ .+.+.+...++....+.... +...+.+++|+| ||++|+ .|+.+..|++||
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SP--DG~~la~~~~~~G~~~~~i~v~d 153 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSW--DGKKVAFAQKPNAADEAVLHVID 153 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECT--TSSEEEEEEEETTCSCCEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECC--CCCEEEEEECCCCCceEEEEEEE
Confidence 37888877655433 34444544444333332111 112489999999 999988 444557899999
Q ss_pred CCCCCCC-CCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCc
Q 022870 93 IENGGLS-SNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL 171 (291)
Q Consensus 93 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d 171 (291)
+.+++.. .. .+.... ...++|+|||+.++.++ .|
T Consensus 154 l~tg~~~~~~---~~~~~~----------------------------------------~~~~~wspDg~~l~~~~--~d 188 (695)
T 2bkl_A 154 VDSGEWSKVD---VIEGGK----------------------------------------YATPKWTPDSKGFYYEW--LP 188 (695)
T ss_dssp TTTCCBCSSC---CBSCCT----------------------------------------TCCCEECTTSSEEEEEE--CC
T ss_pred CCCCCCcCCc---ccCccc----------------------------------------ccceEEecCCCEEEEEE--ec
Confidence 9988653 10 000000 00166999998777543 23
Q ss_pred Ce-------------EEEEeCCCcce--eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCC----c
Q 022870 172 SE-------------VEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG----S 232 (291)
Q Consensus 172 ~~-------------i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg----~ 232 (291)
.. |++|++.+++. ...+... .+ ......+. |+|+ |+ +|+.++.++ .
T Consensus 189 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~------~~----~~~~~~~~-~SpD---G~-~l~~~~~~~~~~~~ 253 (695)
T 2bkl_A 189 TDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT------GD----PTTFLQSD-LSRD---GK-YLFVYILRGWSEND 253 (695)
T ss_dssp CCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC------CC----TTCEEEEE-ECTT---SC-CEEEEEEETTTEEE
T ss_pred CCCCCccccCCCCCEEEEEECCCCchhceEEEecC------CC----CEEEEEEE-ECCC---CC-EEEEEEeCCCCceE
Confidence 33 99999988763 2222210 11 23455666 9998 55 566555444 6
Q ss_pred EEEEEccCCCCceeeccccccceeEEEeecCCCeeEEec---CCCeEEEEEcCCCc
Q 022870 233 ILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG---ADQKIVLYNLDHST 285 (291)
Q Consensus 233 i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s---~dg~i~vw~~~~~~ 285 (291)
|++||..+ + ....+..+...+....| +++.+++... .++.|.+||+++++
T Consensus 254 l~~~~~~~-~-~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 254 VYWKRPGE-K-DFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EEEECTTC-S-SCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred EEEEcCCC-C-ceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 77776543 3 45556666666666666 4555445444 25899999998764
No 212
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.27 E-value=1.3e-09 Score=95.35 Aligned_cols=204 Identities=12% Similarity=0.064 Sum_probs=126.4
Q ss_pred eeEEEEcCCCCEEEEecCCCe--------------EEEEeCCCCeE--EEEEeeecCCcceEEEEEeecCCCCeEEEEeC
Q 022870 21 VTDVCFHQTKPILFAGTTGGE--------------LRIWDTVQHRT--VSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (291)
Q Consensus 21 v~~l~~~~~~~~l~s~~~dg~--------------v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (291)
+..++|+|| +.|+.++.|+. |++|++.++.. ...+........+.++.|+| ||++|+..+.
T Consensus 211 ~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp--DG~~l~~~~~ 287 (741)
T 1yr2_A 211 FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSS--DGRWVVITSS 287 (741)
T ss_dssp SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT--TSCEEEEEEE
T ss_pred eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECC--CCCEEEEEEE
Confidence 367899999 88888776554 89999977652 22333322212488999999 9998887765
Q ss_pred CC-----eEEEEECCCCCCC-CCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCC
Q 022870 85 DG-----TVKCWDIENGGLS-SNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPA 158 (291)
Q Consensus 85 dg-----~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (291)
++ .|.+||+.++... ...+ ........ ..++|
T Consensus 288 ~~~~~~~~l~~~d~~~~~~~~~~~l-~~~~~~~~-----------------------------------------~~~~~ 325 (741)
T 1yr2_A 288 EGTDPVNTVHVARVTNGKIGPVTAL-IPDLKAQW-----------------------------------------DFVDG 325 (741)
T ss_dssp CTTCSCCEEEEEEEETTEECCCEEE-ECSSSSCE-----------------------------------------EEEEE
T ss_pred ccCCCcceEEEEECCCCCCcccEEe-cCCCCceE-----------------------------------------EEEec
Confidence 44 8999998765211 1001 00100000 01336
Q ss_pred CCCcEEEEecC--CcCeEEEEeCCCcc-eeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEE
Q 022870 159 EGPKYMAVAGE--QLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 235 (291)
Q Consensus 159 ~~~~~~~~~g~--~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~v 235 (291)
+|+.+++.+.. .++.|.+||+.++. ....+.. .+ ...+..+. +. . +. ++++...|+..+|
T Consensus 326 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~-------~~----~~~l~~~~-~~-~---~~-lv~~~~~dg~~~l 388 (741)
T 1yr2_A 326 VGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP-------ES----KDNLESVG-IA-G---NR-LFASYIHDAKSQV 388 (741)
T ss_dssp ETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC-------CC----SSEEEEEE-EE-B---TE-EEEEEEETTEEEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec-------CC----CCeEEEEE-EE-C---CE-EEEEEEECCEEEE
Confidence 77777665432 24679999998752 3333331 22 12233444 54 1 33 7888888998777
Q ss_pred EEccCCCCceeeccc-cccceeEEEeecCCCeeE----EecCCCeEEEEEcCCCce
Q 022870 236 WDIRNPGIPLTAMKV-HLEPVLCLSIDESCNGGI----SGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 236 wd~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~----s~s~dg~i~vw~~~~~~~ 286 (291)
|.+...+.....+.. +.+.+..+.+++++..|+ +....++|++||+.+++.
T Consensus 389 ~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 389 LAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred EEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 766522555566654 367788999999988665 334458999999988763
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.23 E-value=9.6e-10 Score=87.17 Aligned_cols=222 Identities=9% Similarity=-0.067 Sum_probs=126.1
Q ss_pred cceeEEEEcCCCCEEEEec--CCCeEEEEeCCCCeEEEEEee-----ecCCcceEEEEEeecCCCCeEEEEeC-----CC
Q 022870 19 ASVTDVCFHQTKPILFAGT--TGGELRIWDTVQHRTVSSSWV-----HSAAHGIVSVATGPSIGLNKVISQGR-----DG 86 (291)
Q Consensus 19 ~~v~~l~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~l~s~~~-----dg 86 (291)
.....++++++|+++++.. .++.++||.+.+++.. .+.. ......+..+++.+ +++++++-.. ++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~--~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDG--NGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECS--SSEEEEEECHHHHTSCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcC--CCcEEEEcCCCCcCCCC
Confidence 6789999999999888853 2343556655455432 2211 01113489999999 8665554433 57
Q ss_pred eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCC-CCcccCCCCCcEEE
Q 022870 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCD-SKDDVPAEGPKYMA 165 (291)
Q Consensus 87 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 165 (291)
.|.+||+.+++... .+.+..... ....+ ..+++++++..+++
T Consensus 94 ~i~~~d~~tg~~~~--~~~~~~~~~-----------------------------------~~~~~~~~v~vd~~~g~~yv 136 (343)
T 2qe8_A 94 KLVAWDTLNNQLSR--VIYLPPPIT-----------------------------------LSNSFVNDLAVDLIHNFVYI 136 (343)
T ss_dssp EEEEEETTTTEEEE--EEECCTTTS-----------------------------------CTTCCCCEEEEETTTTEEEE
T ss_pred eEEEEECCCCeEEE--EEECChhhc-----------------------------------ccccccceEEEecCCCEEEE
Confidence 89999998775322 111100000 00000 01667776555555
Q ss_pred EecC---CcCeEEEEeCCCcceeeEeccc-ccCC-CC-----CCCC----C------cceeeeeEEEecCCCCCCceEEE
Q 022870 166 VAGE---QLSEVEIWDLNTAERCTRLHQN-SCGG-SP-----NFSS----K------GRGMCMAVQAYLPSKSQGFVNVL 225 (291)
Q Consensus 166 ~~g~---~d~~i~~wd~~~~~~~~~~~~~-~~~~-~~-----~~~~----~------~~~~~~~~~~~~p~~~~g~~~l~ 225 (291)
+.. .++.|.+||+.+++....+... ...+ .. +..- . .......++ |+|+ |+ .|+
T Consensus 137 -td~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia-~s~d---g~-~ly 210 (343)
T 2qe8_A 137 -SDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIV-LDAE---NE-WLY 210 (343)
T ss_dssp -EECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEE-ECTT---SC-EEE
T ss_pred -EcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeE-eccC---CC-EEE
Confidence 433 5789999999988766555310 0000 00 0000 0 001245676 9997 54 566
Q ss_pred eecCCC-cEEEEEccC--CCC-----cee--eccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCce
Q 022870 226 AGYEDG-SILVWDIRN--PGI-----PLT--AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 226 ~g~~dg-~i~vwd~~~--~~~-----~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~ 286 (291)
.+..++ .|+.++... .+. ... ...++.....+++++++|+++++...++.|.+||.+++++
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~ 281 (343)
T 2qe8_A 211 LSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAY 281 (343)
T ss_dssp EEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEE
T ss_pred EEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCE
Confidence 665544 666665421 011 011 1123445677899999999999999999999999955553
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.23 E-value=4.1e-09 Score=83.68 Aligned_cols=198 Identities=11% Similarity=-0.005 Sum_probs=128.6
Q ss_pred EEEcCCCCEEEEecC-----CCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEe----------CCCeE
Q 022870 24 VCFHQTKPILFAGTT-----GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTV 88 (291)
Q Consensus 24 l~~~~~~~~l~s~~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~----------~dg~i 88 (291)
....|++..++.... ++.|.+.|..+++.+..+.... .+ . ++++| ||++++++. .++.|
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~--~P-~-va~sp--DG~~lyVan~~~~r~~~G~~~~~V 111 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGF--LP-N-PVVAD--DGSFIAHASTVFSRIARGERTDYV 111 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECS--SC-E-EEECT--TSSCEEEEEEEEEETTEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCC--CC-c-EEECC--CCCEEEEEcccccccccCCCCCEE
Confidence 455688888877755 6899999999999999987655 33 4 99999 999888765 36789
Q ss_pred EEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCC-CCC-cccCCCCCcEEEE
Q 022870 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC-DSK-DDVPAEGPKYMAV 166 (291)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~ 166 (291)
.+||..+.+... ++....... ...+ +.. ++|+|||++++++
T Consensus 112 sviD~~t~~v~~----~I~v~~g~r---------------------------------~~~g~~P~~~a~spDGk~lyVa 154 (386)
T 3sjl_D 112 EVFDPVTLLPTA----DIELPDAPR---------------------------------FLVGTYPWMTSLTPDGKTLLFY 154 (386)
T ss_dssp EEECTTTCCEEE----EEEETTCCC---------------------------------CCBSCCGGGEEECTTSSEEEEE
T ss_pred EEEECCCCeEEE----EEECCCccc---------------------------------cccCCCCceEEEcCCCCEEEEE
Confidence 999999876533 111000000 0000 000 6799999988765
Q ss_pred ecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCcee
Q 022870 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (291)
Q Consensus 167 ~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~ 246 (291)
....++.|.++|+.+++.+.++.. .+ +. . ..|.+ .+ .+++.+.||.+.+.++.+.++...
T Consensus 155 n~~~~~~VsVID~~t~~vv~tI~v-------------~g-~~--~-~~P~g--~~-~~~~~~~DG~~~~v~~~~~g~v~~ 214 (386)
T 3sjl_D 155 QFSPAPAVGVVDLEGKAFKRMLDV-------------PD-CY--H-IFPTA--PD-TFFMHCRDGSLAKVAFGTEGTPEI 214 (386)
T ss_dssp ECSSSCEEEEEETTTTEEEEEEEC-------------CS-EE--E-EEEEE--TT-EEEEEETTSCEEEEECCSSSCCEE
T ss_pred EcCCCCeEEEEECCCCcEEEEEEC-------------CC-cc--e-eecCC--Cc-eeEEECCCCCEEEEECCCCCeEEE
Confidence 333368999999999999888862 11 11 1 23432 22 667888899999999875344322
Q ss_pred ecccc----cccee-EEEee-cCCCeeEEecCCCeEEEEEcCCCc
Q 022870 247 AMKVH----LEPVL-CLSID-ESCNGGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 247 ~~~~h----~~~v~-~~~~~-~~~~~l~s~s~dg~i~vw~~~~~~ 285 (291)
....+ ..++. ...|. ++|++++ .+.+|.|.+.|+.++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 215 THTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGD 258 (386)
T ss_dssp EECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSS
T ss_pred eecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCc
Confidence 11111 12222 24664 6776555 4558999999997654
No 215
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.23 E-value=1.2e-08 Score=81.62 Aligned_cols=121 Identities=7% Similarity=-0.100 Sum_probs=79.7
Q ss_pred EEcCCCCEEEEecC--CC---eEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEe----------CCCeEE
Q 022870 25 CFHQTKPILFAGTT--GG---ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTVK 89 (291)
Q Consensus 25 ~~~~~~~~l~s~~~--dg---~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~----------~dg~i~ 89 (291)
...|++.+++.... .. +|.++|..+++.+..+.... .+ .++++| |+++++.+. .++.|.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~--~p--~i~~sp--Dg~~lyv~n~~~~~~~rg~~~~~v~ 100 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGF--LP--NPVAAH--SGSEFALASTSFSRIAKGKRTDYVE 100 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCC--CC--CeEECC--CCCEEEEEeccccccccCCCCCeEE
Confidence 34467877777653 22 88999999999888776543 33 999999 999998875 367899
Q ss_pred EEECCCCCCCCCCccccccc-eEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCC-CcccCCCCCcEEEEe
Q 022870 90 CWDIENGGLSSNPSLTIKTN-SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDS-KDDVPAEGPKYMAVA 167 (291)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 167 (291)
+||..+.+... .+... ..... ..... .++++|+|++++++.
T Consensus 101 viD~~t~~~~~----~i~~~~~~~~~---------------------------------~g~~p~~~~~spDG~~l~v~n 143 (373)
T 2mad_H 101 VFDPVTFLPIA----DIELPDAPRFD---------------------------------VGPYSWMNANTPNNADLLFFQ 143 (373)
T ss_pred EEECCCCcEEE----EEECCCccccc---------------------------------cCCCccceEECCCCCEEEEEe
Confidence 99998765432 11110 00000 00000 066999998887643
Q ss_pred cCCcCeEEEEeCCCcceeeE-ec
Q 022870 168 GEQLSEVEIWDLNTAERCTR-LH 189 (291)
Q Consensus 168 g~~d~~i~~wd~~~~~~~~~-~~ 189 (291)
...++.|.++| .+++.+.. +.
T Consensus 144 ~~~~~~v~viD-~t~~~~~~~i~ 165 (373)
T 2mad_H 144 FAAGPAVGLVV-QGGSSDDQLLS 165 (373)
T ss_pred cCCCCeEEEEE-CCCCEEeEEcC
Confidence 22257899999 98887776 54
No 216
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.22 E-value=1.3e-09 Score=84.46 Aligned_cols=169 Identities=16% Similarity=0.057 Sum_probs=106.1
Q ss_pred EEEEEeeecCCcceEEEEEeecCCCC-eEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCC
Q 022870 52 TVSSSWVHSAAHGIVSVATGPSIGLN-KVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQAN 130 (291)
Q Consensus 52 ~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (291)
.+..+..+. ....+++|+| +++ +++++..++.|..||..++ . . .+........ .
T Consensus 19 ~~~~l~~~~--~~~eg~~~d~--~g~~l~~~~~~~~~i~~~~~~~~-~-~--~~~~~~~~~~-~---------------- 73 (296)
T 3e5z_A 19 EARRLADGF--TWTEGPVYVP--ARSAVIFSDVRQNRTWAWSDDGQ-L-S--PEMHPSHHQN-G---------------- 73 (296)
T ss_dssp CCEEEECCC--SSEEEEEEEG--GGTEEEEEEGGGTEEEEEETTSC-E-E--EEESSCSSEE-E----------------
T ss_pred cEEEEecCC--ccccCCeEeC--CCCEEEEEeCCCCEEEEEECCCC-e-E--EEECCCCCcc-e----------------
Confidence 334444444 3378999999 887 7778888999999998875 2 1 1111111000 0
Q ss_pred CCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeE
Q 022870 131 EPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAV 210 (291)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (291)
++++++|. +++ +...++.|.+||..+++....... ........+..+
T Consensus 74 -----------------------l~~~~dg~-l~v-~~~~~~~i~~~d~~~g~~~~~~~~--------~~~~~~~~~~~i 120 (296)
T 3e5z_A 74 -----------------------HCLNKQGH-LIA-CSHGLRRLERQREPGGEWESIADS--------FEGKKLNSPNDV 120 (296)
T ss_dssp -----------------------EEECTTCC-EEE-EETTTTEEEEECSTTCCEEEEECE--------ETTEECCCCCCE
T ss_pred -----------------------eeECCCCc-EEE-EecCCCeEEEEcCCCCcEEEEeec--------cCCCCCCCCCCE
Confidence 56889886 444 444468899999988775433321 111111234456
Q ss_pred EEecCCCCCCceEEEe----ec-------------CCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCC
Q 022870 211 QAYLPSKSQGFVNVLA----GY-------------EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD 273 (291)
Q Consensus 211 ~~~~p~~~~g~~~l~~----g~-------------~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d 273 (291)
. +.|+ |+ ++++ |+ ..+.|..++.. ++ +..+..+...+.+++|+|+++.|++.+.+
T Consensus 121 ~-~d~~---G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~ 192 (296)
T 3e5z_A 121 C-LAPD---GS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGD 192 (296)
T ss_dssp E-ECTT---SC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SC-EEEEECCCSSEEEEEECTTSCEEEEETTT
T ss_pred E-ECCC---CC-EEEECCccccccccccccccccCCCcEEEEECCC--CC-EEEeecCCCCCccEEECCCCCEEEEeCCC
Confidence 5 8887 55 6665 33 13455555543 33 34445556778999999999988888888
Q ss_pred CeEEEEEcC-CCce
Q 022870 274 QKIVLYNLD-HSTV 286 (291)
Q Consensus 274 g~i~vw~~~-~~~~ 286 (291)
+.|.+|+++ ++++
T Consensus 193 ~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 193 NATHRYCLNARGET 206 (296)
T ss_dssp TEEEEEEECSSSCE
T ss_pred CeEEEEEECCCCcC
Confidence 999999997 4544
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.22 E-value=5.7e-09 Score=84.61 Aligned_cols=207 Identities=10% Similarity=0.026 Sum_probs=128.9
Q ss_pred EEEcCCCCEEEEecCCC--eEEEEeCCCCeEEEEE---ee-ecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCC
Q 022870 24 VCFHQTKPILFAGTTGG--ELRIWDTVQHRTVSSS---WV-HSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG 97 (291)
Q Consensus 24 l~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~---~~-~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 97 (291)
++|++++..|+.+..++ .|.+|+...+.....+ .. .. ..+.+++++| ++..|+.+..++.|+.||..+..
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~--~~p~~iav~p--~~g~lyv~d~~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFS--GKIGAVALDE--TEEWLYFVDSNKNFGRFNVKTQE 251 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSC--SCCCBCEECT--TSSEEEEECTTCEEEEEETTTCC
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhc--CCcEEEEEeC--CCCeEEEEECCCcEEEEECCCCC
Confidence 89999999888887766 7999997765543333 11 22 3478899999 66777777788999999988654
Q ss_pred CCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEE
Q 022870 98 LSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIW 177 (291)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~w 177 (291)
... +... .... .. +. . + ...++|+|++..+++ +...++.|+.|
T Consensus 252 ~~~-----~~~~-------~~~g-~~------~~-------~---------P-~~~ia~~p~~g~lyv-~d~~~~~I~~~ 294 (409)
T 3hrp_A 252 VTL-----IKQL-------ELSG-SL------GT-------N---------P-GPYLIYYFVDSNFYM-SDQNLSSVYKI 294 (409)
T ss_dssp EEE-----EEEC-------CCCS-CC------CC-------S---------S-CCEEEEETTTTEEEE-EETTTTEEEEE
T ss_pred EEE-----Eecc-------cccC-CC------CC-------C---------c-cccEEEeCCCCEEEE-EeCCCCEEEEE
Confidence 210 0000 0000 00 00 0 0 001678997666665 45557899999
Q ss_pred eCCCcceeeEecccccCCCCCCCC-----CcceeeeeEEEecCCCCCCceEEEeec-CCCcEEEEEccCCCCceeecccc
Q 022870 178 DLNTAERCTRLHQNSCGGSPNFSS-----KGRGMCMAVQAYLPSKSQGFVNVLAGY-EDGSILVWDIRNPGIPLTAMKVH 251 (291)
Q Consensus 178 d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~g~~~l~~g~-~dg~i~vwd~~~~~~~~~~~~~h 251 (291)
|.... ...+.... ...+... ..-.....++ +.|+ |+ ++++-. .++.|+.||+.+ +. +..+.++
T Consensus 295 ~~~g~--~~~~~g~~--~~~g~~dg~~~~~~~~~P~gia-~d~d---G~-lyvad~~~~~~I~~~~~~~-G~-v~~~~g~ 363 (409)
T 3hrp_A 295 TPDGE--CEWFCGSA--TQKTVQDGLREEALFAQPNGMT-VDED---GN-FYIVDGFKGYCLRKLDILD-GY-VSTVAGQ 363 (409)
T ss_dssp CTTCC--EEEEEECT--TCCSCBCEEGGGCBCSSEEEEE-ECTT---CC-EEEEETTTTCEEEEEETTT-TE-EEEEEEC
T ss_pred ecCCC--EEEEEeCC--CCCCcCCCcccccEeCCCeEEE-EeCC---CC-EEEEeCCCCCEEEEEECCC-CE-EEEEeCC
Confidence 98654 22222100 0001100 0012356676 9987 55 677777 889999999765 43 3444443
Q ss_pred ---------------ccceeEEEeecCCCeeEEecCCCeEEEEEcC
Q 022870 252 ---------------LEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (291)
Q Consensus 252 ---------------~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~ 282 (291)
-....+|++++++.++++-..++.|+.++++
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 2458899999999888888889999988764
No 218
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.21 E-value=8.5e-09 Score=76.77 Aligned_cols=194 Identities=10% Similarity=0.100 Sum_probs=123.6
Q ss_pred eEEecCCccce--eEEEEcCCCCEEEEecCCC--eEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEE-EEeCC
Q 022870 11 VAVLRGHRASV--TDVCFHQTKPILFAGTTGG--ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRD 85 (291)
Q Consensus 11 ~~~l~~h~~~v--~~l~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~d 85 (291)
+.++ .|...- ..|.|+ ++.++.+.+.+| .|+++|+++++.+..+..... .......+ +++.|+ ..-.+
T Consensus 34 v~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~---~FgeGit~--~g~~ly~ltw~~ 106 (262)
T 3nol_A 34 VHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR---YFGEGISD--WKDKIVGLTWKN 106 (262)
T ss_dssp EEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT---CCEEEEEE--ETTEEEEEESSS
T ss_pred EEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc---cceeEEEE--eCCEEEEEEeeC
Confidence 4455 355443 779998 676667777665 899999999999988876432 33333333 334555 44468
Q ss_pred CeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEE
Q 022870 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (291)
Q Consensus 86 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
+.+.+||..+.+... ++.... . +..+++++..+++
T Consensus 107 ~~v~v~D~~t~~~~~----ti~~~~--------e---------------------------------G~glt~dg~~L~~ 141 (262)
T 3nol_A 107 GLGFVWNIRNLRQVR----SFNYDG--------E---------------------------------GWGLTHNDQYLIM 141 (262)
T ss_dssp SEEEEEETTTCCEEE----EEECSS--------C---------------------------------CCCEEECSSCEEE
T ss_pred CEEEEEECccCcEEE----EEECCC--------C---------------------------------ceEEecCCCEEEE
Confidence 899999999887543 221110 0 0335567777776
Q ss_pred EecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCce
Q 022870 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 245 (291)
Q Consensus 166 ~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~ 245 (291)
+.| ++.|.++|..+.+.+..+... .....-.....+. |. + |+ ..+..-.+..|.+.|.++ ++.+
T Consensus 142 SdG--s~~i~~iDp~T~~v~~~I~V~-------~~g~~~~~lNELe-~~-~---G~-lyan~w~~~~I~vIDp~t-G~V~ 205 (262)
T 3nol_A 142 SDG--TPVLRFLDPESLTPVRTITVT-------AHGEELPELNELE-WV-D---GE-IFANVWQTNKIVRIDPET-GKVT 205 (262)
T ss_dssp CCS--SSEEEEECTTTCSEEEEEECE-------ETTEECCCEEEEE-EE-T---TE-EEEEETTSSEEEEECTTT-CBEE
T ss_pred ECC--CCeEEEEcCCCCeEEEEEEec-------cCCccccccceeE-EE-C---CE-EEEEEccCCeEEEEECCC-CcEE
Confidence 544 578999999999988887631 0000011122343 54 2 54 555556788999999998 7776
Q ss_pred eecccc------------ccceeEEEeecCCCeeEEecC
Q 022870 246 TAMKVH------------LEPVLCLSIDESCNGGISGGA 272 (291)
Q Consensus 246 ~~~~~h------------~~~v~~~~~~~~~~~l~s~s~ 272 (291)
..+... ....++|+|+|+++.|...+.
T Consensus 206 ~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 206 GIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 655421 235689999998777765554
No 219
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.20 E-value=7.3e-08 Score=74.47 Aligned_cols=232 Identities=9% Similarity=-0.048 Sum_probs=133.2
Q ss_pred CccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCC
Q 022870 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96 (291)
Q Consensus 17 h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 96 (291)
+...+.++++.+++.+.++...++.|..+|.. ++.. .+........+.++++.+ ++.++++...++.|..||.. +
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~~~~-g 134 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGL--NGDIWFTQLNGDRIGKLTAD-G 134 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECS--TTCEEEEETTTTEEEEECTT-S
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECC--CCCEEEEccCCCeEEEECCC-C
Confidence 34678999999999888877778899999987 5543 333221114489999998 88877777768899999987 4
Q ss_pred CCCCCCccccc--cceEEEEEeecccCccceecc-CCCCceeeecccCccccccCCCCCC----cccCCCCCcEEEEecC
Q 022870 97 GLSSNPSLTIK--TNSYHFCKLSLVKEPYANAKQ-ANEPKDCYEREVGETVDTDSLCDSK----DDVPAEGPKYMAVAGE 169 (291)
Q Consensus 97 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~ 169 (291)
+... .... ........+... ....... .......++. .............. +++++++. +++ +..
T Consensus 135 ~~~~---~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v-~~~ 206 (300)
T 2qc5_A 135 TIYE---YDLPNKGSYPAFITLGSD--NALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGA-LWF-VEI 206 (300)
T ss_dssp CEEE---EECSSTTCCEEEEEECTT--SSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEE-EET
T ss_pred CEEE---ccCCCCCCCceeEEECCC--CCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCC-EEE-Ecc
Confidence 3221 1111 111122222211 1112111 1222333333 22211111111111 78888885 444 333
Q ss_pred CcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCce-eec
Q 022870 170 QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL-TAM 248 (291)
Q Consensus 170 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~-~~~ 248 (291)
..+.|.+||. +++....... .. ...+.++. +.++ |+ +.++...++.|..||.. ++.. ..+
T Consensus 207 ~~~~i~~~~~-~g~~~~~~~~-------~~----~~~~~~i~-~d~~---g~-l~v~~~~~~~i~~~~~~--g~~~~~~~ 267 (300)
T 2qc5_A 207 MGNKIGRITT-TGEISEYDIP-------TP----NARPHAIT-AGKN---SE-IWFTEWGANQIGRITND--NTIQEYQL 267 (300)
T ss_dssp TTTEEEEECT-TCCEEEEECS-------ST----TCCEEEEE-ECST---TC-EEEEETTTTEEEEECTT--SCEEEEEC
T ss_pred CCCEEEEEcC-CCcEEEEECC-------CC----CCCceEEE-ECCC---CC-EEEeccCCCeEEEECCC--CcEEEEEC
Confidence 4578999998 4443322110 11 23355665 8877 54 55666667899999984 4332 223
Q ss_pred cccccceeEEEeecCCCeeEEecCCCeEEEEEcC
Q 022870 249 KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (291)
Q Consensus 249 ~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~ 282 (291)
......+.+++++++|++.++.. . .|..++.+
T Consensus 268 ~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 268 QTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp CSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred CccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 33346689999999998666665 4 67777654
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.17 E-value=3.1e-08 Score=77.87 Aligned_cols=187 Identities=12% Similarity=0.067 Sum_probs=112.2
Q ss_pred ccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeec--CCcceEEEEEeecCCCCeEEEEeC------CCeEE
Q 022870 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS--AAHGIVSVATGPSIGLNKVISQGR------DGTVK 89 (291)
Q Consensus 18 ~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~~~------dg~i~ 89 (291)
...+.+++|+++|+++++. .+ .|.+||..+++......... ....+..++++| +|+++++... .+.|.
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~--~G~l~v~~~~~~~~~~~~~l~ 164 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHP--SGALWIGTMGRKAETGAGSIY 164 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECT--TSCEEEEEEETTCCTTCEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECC--CCCEEEEeCCCcCCCCceEEE
Confidence 4578999999999877654 44 49999988877543322111 113488999999 8886665432 23454
Q ss_pred EEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecC
Q 022870 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE 169 (291)
Q Consensus 90 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 169 (291)
.++ +++.. .+.. . ... +. .++|+|+++.+++ +.+
T Consensus 165 ~~~--~g~~~-----~~~~---~---~~~---~~-----------------------------~i~~s~dg~~lyv-~~~ 198 (326)
T 2ghs_A 165 HVA--KGKVT-----KLFA---D---ISI---PN-----------------------------SICFSPDGTTGYF-VDT 198 (326)
T ss_dssp EEE--TTEEE-----EEEE---E---ESS---EE-----------------------------EEEECTTSCEEEE-EET
T ss_pred EEe--CCcEE-----EeeC---C---Ccc---cC-----------------------------CeEEcCCCCEEEE-EEC
Confidence 455 33210 0000 0 000 00 0568999987665 444
Q ss_pred CcCeEEEEeCC--Cc-cee--eEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCc
Q 022870 170 QLSEVEIWDLN--TA-ERC--TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (291)
Q Consensus 170 ~d~~i~~wd~~--~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (291)
.++.|.+||+. ++ +.. ..+.. . .........+. +.++ |. +.++...++.|.+||. + ++.
T Consensus 199 ~~~~I~~~d~~~~~Gl~~~~~~~~~~--------~-~~~~~~p~gi~-~d~~---G~-lwva~~~~~~v~~~d~-~-g~~ 262 (326)
T 2ghs_A 199 KVNRLMRVPLDARTGLPTGKAEVFID--------S-TGIKGGMDGSV-CDAE---GH-IWNARWGEGAVDRYDT-D-GNH 262 (326)
T ss_dssp TTCEEEEEEBCTTTCCBSSCCEEEEE--------C-TTSSSEEEEEE-ECTT---SC-EEEEEETTTEEEEECT-T-CCE
T ss_pred CCCEEEEEEcccccCCcccCceEEEE--------C-CCCCCCCCeeE-ECCC---CC-EEEEEeCCCEEEEECC-C-CCE
Confidence 56899999986 55 321 11210 0 00122344565 7776 54 5555556788999998 4 677
Q ss_pred eeeccccccceeEEEee-cCCCeeEEe
Q 022870 245 LTAMKVHLEPVLCLSID-ESCNGGISG 270 (291)
Q Consensus 245 ~~~~~~h~~~v~~~~~~-~~~~~l~s~ 270 (291)
+..+..+...+++++|+ +++..|+.+
T Consensus 263 ~~~i~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 263 IARYEVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp EEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred EEEEECCCCCcEEEEEecCCCCEEEEE
Confidence 77777767789999998 887666433
No 221
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.16 E-value=1.3e-08 Score=81.62 Aligned_cols=219 Identities=10% Similarity=0.027 Sum_probs=129.2
Q ss_pred CCCCCCceEEecC-------CccceeEEEEcCCCCEEEEecCC------CeEEEEeCCCCeEEEEEeeecCC-cceEEEE
Q 022870 4 RPPPPDPVAVLRG-------HRASVTDVCFHQTKPILFAGTTG------GELRIWDTVQHRTVSSSWVHSAA-HGIVSVA 69 (291)
Q Consensus 4 ~~~~~~~~~~l~~-------h~~~v~~l~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~-~~v~~~~ 69 (291)
.|..++..++++. -...-..+..+|+| +++++..+ |.|.+.|.++.+.+..+.....+ .--..+.
T Consensus 116 ~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~ 194 (462)
T 2ece_A 116 NPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFW 194 (462)
T ss_dssp CTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEE
T ss_pred CCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEE
Confidence 3444566666630 11234567888999 66666555 78999999999999988744322 1134688
Q ss_pred EeecCCCCeEEEEe-------------------CCCeEEEEECCCCCCCCCCccccccc--eEEEEEeecccCccceecc
Q 022870 70 TGPSIGLNKVISQG-------------------RDGTVKCWDIENGGLSSNPSLTIKTN--SYHFCKLSLVKEPYANAKQ 128 (291)
Q Consensus 70 ~~~~~~~~~l~s~~-------------------~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 128 (291)
|+| +++.+++.. .+.+|.+||+.+++... ++... ......+.
T Consensus 195 ~~p--~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~----tI~vg~~g~~P~~i~----------- 257 (462)
T 2ece_A 195 WNL--PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIH----SLTLGEENRMALELR----------- 257 (462)
T ss_dssp EET--TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEE----EEESCTTEEEEEEEE-----------
T ss_pred ECC--CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEee----EEecCCCCCccceeE-----------
Confidence 899 888888874 36899999999765432 22221 00000000
Q ss_pred CCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecC-----CcCeEEEEeCCCcce--eeEecccccCCCCCCC-
Q 022870 129 ANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE-----QLSEVEIWDLNTAER--CTRLHQNSCGGSPNFS- 200 (291)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~- 200 (291)
++|+|++++.+++ +. .+++|.+|....++. .+.+..... ...+..
T Consensus 258 -------------------------f~~~Pdg~~aYV~-~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~-~v~~~lp 310 (462)
T 2ece_A 258 -------------------------PLHDPTKLMGFIN-MVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAE-PLEGNLP 310 (462)
T ss_dssp -------------------------ECSSTTCCEEEEE-EEEETTTCCEEEEEEEEETTEEEEEEEEEECCE-ECCSSCC
T ss_pred -------------------------eeECCCCCEEEEE-EeeeccCCCceEEEEEecCCceeEEEEEeCCCc-ccccccc
Confidence 3369999877764 44 567888876654421 111110000 000000
Q ss_pred ------CCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCC--ceeecccc-----------c---cceeEE
Q 022870 201 ------SKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI--PLTAMKVH-----------L---EPVLCL 258 (291)
Q Consensus 201 ------~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~--~~~~~~~h-----------~---~~v~~~ 258 (291)
.........+. ++|+ |+.+.++.-..+.|.+||+.+.++ .+..+.-. . +....+
T Consensus 311 ~~~~~f~~~~~~pa~I~-lS~D---GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~ 386 (462)
T 2ece_A 311 EILKPFKAVPPLVTDID-ISLD---DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQML 386 (462)
T ss_dssp GGGGGGTEECCCCCCEE-ECTT---SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCE
T ss_pred ccccccccCCCceeEEE-ECCC---CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEE
Confidence 00013456676 9998 663445555678999999964332 33333221 0 135889
Q ss_pred EeecCCCeeEEec
Q 022870 259 SIDESCNGGISGG 271 (291)
Q Consensus 259 ~~~~~~~~l~s~s 271 (291)
+++|+|++|+.+.
T Consensus 387 ~lSpDGk~LyVaN 399 (462)
T 2ece_A 387 EISRDGRRVYVTN 399 (462)
T ss_dssp EECTTSSEEEEEC
T ss_pred EEcCCCCEEEEEc
Confidence 9999999998877
No 222
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.09 E-value=2.4e-08 Score=74.35 Aligned_cols=194 Identities=10% Similarity=0.031 Sum_probs=122.3
Q ss_pred ceEEecCCccc--eeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCe
Q 022870 10 PVAVLRGHRAS--VTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (291)
Q Consensus 10 ~~~~l~~h~~~--v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 87 (291)
.+.++. |... ...|.|+. +.+..+.+.+|.|+++|+++++.+..+ .... ..-..+++.. + ......-.++.
T Consensus 45 Vv~~~p-hd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~-~FgeGit~~g--~-~Ly~ltw~~~~ 117 (268)
T 3nok_A 45 IIREYP-HATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGN-IFAEGLASDG--E-RLYQLTWTEGL 117 (268)
T ss_dssp EEEEEE-CCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTT-CCEEEEEECS--S-CEEEEESSSCE
T ss_pred EEEEEc-CCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC-cceeEEEEeC--C-EEEEEEccCCE
Confidence 345553 5443 36788874 567778888899999999999988887 4332 1123355443 2 44445556889
Q ss_pred EEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEe
Q 022870 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVA 167 (291)
Q Consensus 88 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
+.+||..+.+.+. ++.... .. ..+++++..++++.
T Consensus 118 v~V~D~~Tl~~~~----ti~~~~--------eG---------------------------------wGLt~Dg~~L~vSd 152 (268)
T 3nok_A 118 LFTWSGMPPQRER----TTRYSG--------EG---------------------------------WGLCYWNGKLVRSD 152 (268)
T ss_dssp EEEEETTTTEEEE----EEECSS--------CC---------------------------------CCEEEETTEEEEEC
T ss_pred EEEEECCcCcEEE----EEeCCC--------ce---------------------------------eEEecCCCEEEEEC
Confidence 9999999886543 221100 00 23556777777654
Q ss_pred cCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceee
Q 022870 168 GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (291)
Q Consensus 168 g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~ 247 (291)
| ++.|.++|..+.+.+.+++... + ...-.....+. |. + |+ ..+....+..|.+.|.++ ++.+..
T Consensus 153 G--s~~l~~iDp~T~~v~~~I~V~~------~-g~~v~~lNeLe-~~-d---G~-lyanvw~s~~I~vIDp~T-G~V~~~ 216 (268)
T 3nok_A 153 G--GTMLTFHEPDGFALVGAVQVKL------R-GQPVELINELE-CA-N---GV-IYANIWHSSDVLEIDPAT-GTVVGV 216 (268)
T ss_dssp S--SSEEEEECTTTCCEEEEEECEE------T-TEECCCEEEEE-EE-T---TE-EEEEETTCSEEEEECTTT-CBEEEE
T ss_pred C--CCEEEEEcCCCCeEEEEEEeCC------C-CcccccccccE-Ee-C---CE-EEEEECCCCeEEEEeCCC-CcEEEE
Confidence 3 6899999999999888876310 0 00111223344 54 2 54 555555788999999998 777665
Q ss_pred cccc-------------ccceeEEEeecCCCeeEEec
Q 022870 248 MKVH-------------LEPVLCLSIDESCNGGISGG 271 (291)
Q Consensus 248 ~~~h-------------~~~v~~~~~~~~~~~l~s~s 271 (291)
+... .+..++|+|+|+++.|...+
T Consensus 217 Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 217 IDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 5421 13678999999766554444
No 223
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.09 E-value=1.3e-07 Score=69.90 Aligned_cols=197 Identities=9% Similarity=0.037 Sum_probs=122.3
Q ss_pred CceEEecCCccc--eeEEEEcCCCCEEEEecCC--CeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeC
Q 022870 9 DPVAVLRGHRAS--VTDVCFHQTKPILFAGTTG--GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (291)
Q Consensus 9 ~~~~~l~~h~~~--v~~l~~~~~~~~l~s~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~ 84 (291)
+.+.++ .|... ...|.|++ +.+..+.+.+ ..|+.+|+++++.+..+...... .-..+++.. + ......-.
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~~~--~-~ly~ltw~ 83 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVAWR--D-RLIQLTWR 83 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEEET--T-EEEEEESS
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEEeC--C-EEEEEEee
Confidence 345555 46544 55899987 5566666665 48999999999999888765431 113344433 2 44445566
Q ss_pred CCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEE
Q 022870 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (291)
Q Consensus 85 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
++.+.+||..+.+... +++.... +..+.+++..++
T Consensus 84 ~~~v~v~D~~tl~~~~----ti~~~~~-----------------------------------------Gwglt~dg~~L~ 118 (243)
T 3mbr_X 84 NHEGFVYDLATLTPRA----RFRYPGE-----------------------------------------GWALTSDDSHLY 118 (243)
T ss_dssp SSEEEEEETTTTEEEE----EEECSSC-----------------------------------------CCEEEECSSCEE
T ss_pred CCEEEEEECCcCcEEE----EEeCCCC-----------------------------------------ceEEeeCCCEEE
Confidence 8999999999876543 2211100 022556777787
Q ss_pred EEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCc
Q 022870 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (291)
Q Consensus 165 ~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (291)
++-| ++.|.++|..+.+.+.+++... + ...-.....+. |. +|+ ..+....+..|.+.|.++ ++.
T Consensus 119 vSdg--s~~l~~iDp~t~~~~~~I~V~~------~-g~~~~~lNeLe-~~----~G~-lyanvw~s~~I~vIDp~t-G~V 182 (243)
T 3mbr_X 119 MSDG--TAVIRKLDPDTLQQVGSIKVTA------G-GRPLDNLNELE-WV----NGE-LLANVWLTSRIARIDPAS-GKV 182 (243)
T ss_dssp EECS--SSEEEEECTTTCCEEEEEECEE------T-TEECCCEEEEE-EE----TTE-EEEEETTTTEEEEECTTT-CBE
T ss_pred EECC--CCeEEEEeCCCCeEEEEEEEcc------C-CcccccceeeE-Ee----CCE-EEEEECCCCeEEEEECCC-CCE
Confidence 6554 5889999999998888876310 0 00111223333 43 254 445555678999999998 777
Q ss_pred eeeccc-------------cccceeEEEeecCCCeeEEecC
Q 022870 245 LTAMKV-------------HLEPVLCLSIDESCNGGISGGA 272 (291)
Q Consensus 245 ~~~~~~-------------h~~~v~~~~~~~~~~~l~s~s~ 272 (291)
+..+.. -....++|+++|+++.|...+.
T Consensus 183 ~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 183 VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 665441 1235689999997666654443
No 224
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.08 E-value=2e-08 Score=81.17 Aligned_cols=194 Identities=11% Similarity=0.003 Sum_probs=125.3
Q ss_pred CCCCEEEEecC-C----CeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEe----------CCCeEEEEE
Q 022870 28 QTKPILFAGTT-G----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTVKCWD 92 (291)
Q Consensus 28 ~~~~~l~s~~~-d----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~----------~dg~i~iwd 92 (291)
+++..++.... + +.|.+.|..+++.+.++.... .+ .++++| |+++++++. .++.|.++|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~--~P--gia~Sp--Dgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF--LP--HPVAAE--DGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS--SC--EEEECT--TSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC--CC--ceEECC--CCCEEEEEeccccccccCCCCCEEEEEE
Confidence 36665655443 2 799999999999999988654 44 899999 999888776 467899999
Q ss_pred CCCCCCCCCCccccccc-eEEE-EEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCC
Q 022870 93 IENGGLSSNPSLTIKTN-SYHF-CKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQ 170 (291)
Q Consensus 93 ~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 170 (291)
..+.+... ++... .... ....+. .++|+|+|++++++....
T Consensus 156 ~~t~~vv~----~I~v~g~~r~~~g~~P~---------------------------------~~~~spDGk~lyV~n~~~ 198 (426)
T 3c75_H 156 PVTFLPIA----DIELPDAPRFLVGTYQW---------------------------------MNALTPDNKNLLFYQFSP 198 (426)
T ss_dssp TTTCCEEE----EEEETTCCCCCBSCCGG---------------------------------GSEECTTSSEEEEEECSS
T ss_pred CCCCcEEE----EEECCCccccccCCCcc---------------------------------eEEEcCCCCEEEEEecCC
Confidence 99876533 11100 0000 000000 077999999888643333
Q ss_pred cCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCcee----
Q 022870 171 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT---- 246 (291)
Q Consensus 171 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~---- 246 (291)
++.|.+.|+.+++.+.++.. .+. .. ..|++. + .+++.+.||.+.+.+..+ ++...
T Consensus 199 ~~~VsVID~~t~kvv~~I~v-------------~g~---~~-~~p~g~--~-~~v~~~~dG~~~~V~~~~-~~v~~~~~~ 257 (426)
T 3c75_H 199 APAVGVVDLEGKTFDRMLDV-------------PDC---YH-IFPASP--T-VFYMNCRDGSLARVDFAD-GETKVTNTE 257 (426)
T ss_dssp SCEEEEEETTTTEEEEEEEC-------------CSE---EE-EEEEET--T-EEEEEETTSSEEEEECCT-TCCEEEECC
T ss_pred CCeEEEEECCCCeEEEEEEc-------------CCc---ee-eccCCC--c-EEEEEcCCCCEEEEECCC-CcEEEEeee
Confidence 68899999999998888873 111 11 444421 2 566677788888888854 44432
Q ss_pred eccccccce-eEEEeecCCCeeEEecCCCeEEEEEcCCCc
Q 022870 247 AMKVHLEPV-LCLSIDESCNGGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 247 ~~~~h~~~v-~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~ 285 (291)
.+.....++ ..+.+++++..++..+..+.+.+.|+.+..
T Consensus 258 ~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~ 297 (426)
T 3c75_H 258 VFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEG 297 (426)
T ss_dssp CCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSC
T ss_pred eeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCc
Confidence 122112222 235678887777766778899999986543
No 225
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.08 E-value=8.1e-08 Score=77.03 Aligned_cols=226 Identities=10% Similarity=0.072 Sum_probs=125.4
Q ss_pred CCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCcccccc
Q 022870 29 TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKT 108 (291)
Q Consensus 29 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 108 (291)
++..++.++.++.|..+|.++++.+......... ...... .+..++.++.++.|..+|.++++...+ .....
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~--~~~p~~----~~~~v~v~~~~g~l~~~d~~tG~~~W~--~~~~~ 173 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEA--LSRPVV----SDGLVLIHTSNGQLQALNEADGAVKWT--VNLDM 173 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCC--CSCCEE----ETTEEEEECTTSEEEEEETTTCCEEEE--EECCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCce--EcCCEE----ECCEEEEEcCCCeEEEEECCCCcEEEE--EeCCC
Confidence 3457888888999999999999988776654321 111122 236788888999999999998876441 11110
Q ss_pred ceEEEE-Eeeccc-CccceeccCCCCceeeecccCccccccCCCCC----------CcccCC--CCCcEEEEecCCcCeE
Q 022870 109 NSYHFC-KLSLVK-EPYANAKQANEPKDCYEREVGETVDTDSLCDS----------KDDVPA--EGPKYMAVAGEQLSEV 174 (291)
Q Consensus 109 ~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~~~g~~d~~i 174 (291)
...... ...+.. ..........+....++....+..-....... .+...| .+..+++ ++.++.+
T Consensus 174 ~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~--~~~~g~l 251 (376)
T 3q7m_A 174 PSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFA--LAYNGNL 251 (376)
T ss_dssp -----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEE--ECTTSCE
T ss_pred CceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEE--EecCcEE
Confidence 000000 000000 01111111122233334333332211110000 000111 2334443 4457899
Q ss_pred EEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccc-ccc
Q 022870 175 EIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV-HLE 253 (291)
Q Consensus 175 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-h~~ 253 (291)
..+|.++++.+..... . ....+. .. +. .++.++.++.|..+|..+ ++.+..... ...
T Consensus 252 ~~~d~~tG~~~w~~~~-------------~-~~~~~~-~~-----~~-~l~~~~~~g~l~~~d~~t-G~~~w~~~~~~~~ 309 (376)
T 3q7m_A 252 TALDLRSGQIMWKREL-------------G-SVNDFI-VD-----GN-RIYLVDQNDRVMALTIDG-GVTLWTQSDLLHR 309 (376)
T ss_dssp EEEETTTCCEEEEECC-------------C-CEEEEE-EE-----TT-EEEEEETTCCEEEEETTT-CCEEEEECTTTTS
T ss_pred EEEECCCCcEEeeccC-------------C-CCCCce-EE-----CC-EEEEEcCCCeEEEEECCC-CcEEEeecccCCC
Confidence 9999999988766552 0 111222 22 22 688888899999999998 776665542 222
Q ss_pred ceeEEEeecCCCeeEEecCCCeEEEEEcCCCceee
Q 022870 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 254 ~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
.+....... ..|+.++.+|.|.++|.++++++.
T Consensus 310 ~~~~~~~~~--~~l~v~~~~g~l~~~d~~tG~~~~ 342 (376)
T 3q7m_A 310 LLTSPVLYN--GNLVVGDSEGYLHWINVEDGRFVA 342 (376)
T ss_dssp CCCCCEEET--TEEEEECTTSEEEEEETTTCCEEE
T ss_pred cccCCEEEC--CEEEEEeCCCeEEEEECCCCcEEE
Confidence 333334433 368888889999999999998764
No 226
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.04 E-value=6e-08 Score=75.57 Aligned_cols=199 Identities=11% Similarity=0.016 Sum_probs=111.4
Q ss_pred ceEEEEEeecCCCCeEEE-------EeCCCeEEEEECCCCCCCCCCcccc-----ccceEEEEEeecccCccceeccCCC
Q 022870 64 GIVSVATGPSIGLNKVIS-------QGRDGTVKCWDIENGGLSSNPSLTI-----KTNSYHFCKLSLVKEPYANAKQANE 131 (291)
Q Consensus 64 ~v~~~~~~~~~~~~~l~s-------~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (291)
...+++|.+ ++.++++ ...++.|.+||..+++... +.. .........+.... ..........
T Consensus 19 ~~~~~~~~~--~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~---~~~~~~~~~~~~~~~i~~~~~~-g~l~v~~~~~ 92 (314)
T 1pjx_A 19 GAEGPVFDK--NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV---ICKPEVNGYGGIPAGCQCDRDA-NQLFVADMRL 92 (314)
T ss_dssp TCEEEEECT--TSCEEEEETTCEETTEECCEEEEECTTTCCEEE---EECCEETTEECCEEEEEECSSS-SEEEEEETTT
T ss_pred CccCceECC--CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE---EEecccCCCCCCCceEEEecCC-CcEEEEECCC
Confidence 368999998 8777777 5778999999987765421 111 01111112121110 1122222222
Q ss_pred CceeeecccCccccc---cCCCC----CC-cccCCCCCcEEEEecCC--------------cCeEEEEeCCCcceeeEec
Q 022870 132 PKDCYEREVGETVDT---DSLCD----SK-DDVPAEGPKYMAVAGEQ--------------LSEVEIWDLNTAERCTRLH 189 (291)
Q Consensus 132 ~~~~~~~~~~~~~~~---~~~~~----~~-~~~~~~~~~~~~~~g~~--------------d~~i~~wd~~~~~~~~~~~ 189 (291)
.+..++.. ...... ..... .. ++++++|.. ++++... .+.|..||.. ++......
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l-~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~ 169 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNL-WITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT 169 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCE-EEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCE-EEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc
Confidence 34444444 222111 01111 11 888999864 4433321 1568888876 44333222
Q ss_pred ccccCCCCCCCCCcceeeeeEEEec----CCCCCCceEEEeecCCCcEEEEEccCCCC-----ceeeccccc-cceeEEE
Q 022870 190 QNSCGGSPNFSSKGRGMCMAVQAYL----PSKSQGFVNVLAGYEDGSILVWDIRNPGI-----PLTAMKVHL-EPVLCLS 259 (291)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~----p~~~~g~~~l~~g~~dg~i~vwd~~~~~~-----~~~~~~~h~-~~v~~~~ 259 (291)
+ ......+. |+ |+ |+.++++...++.|.+||....+. ....+..+. ..+..++
T Consensus 170 ---------~----~~~~~~i~-~~~~~d~d---g~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~ 232 (314)
T 1pjx_A 170 ---------A----FQFPNGIA-VRHMNDGR---PYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMD 232 (314)
T ss_dssp ---------E----ESSEEEEE-EEECTTSC---EEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEE
T ss_pred ---------C----CCCcceEE-EecccCCC---CCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceE
Confidence 0 11234454 87 77 442455556789999999862133 223344444 5688999
Q ss_pred eecCCCeeEEecCCCeEEEEEcCCCceee
Q 022870 260 IDESCNGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 260 ~~~~~~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
++++|+++++...++.|.+||.++++.+.
T Consensus 233 ~d~~G~l~v~~~~~~~i~~~d~~~g~~~~ 261 (314)
T 1pjx_A 233 FDEDNNLLVANWGSSHIEVFGPDGGQPKM 261 (314)
T ss_dssp EBTTCCEEEEEETTTEEEEECTTCBSCSE
T ss_pred ECCCCCEEEEEcCCCEEEEEcCCCCcEeE
Confidence 99999988887788999999998666543
No 227
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.04 E-value=2.3e-08 Score=76.19 Aligned_cols=197 Identities=11% Similarity=-0.032 Sum_probs=108.7
Q ss_pred ceEEEEEeecCCCCeEE-EEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCc
Q 022870 64 GIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (291)
Q Consensus 64 ~v~~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (291)
...++++.+ ++++++ +...++.|.+||..+....... ...........+.. ...............++.....
T Consensus 25 ~p~~i~~~~--~g~l~v~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~p~~i~~~~--~g~l~v~~~~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDS--AGNVYVTSEGMYGRVVKLATGSTGTTVLP--FNGLYQPQGLAVDG--AGTVYVTDFNNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECT--TCCEEEEECSSSCEEEEECC-----EECC--CCSCCSCCCEEECT--TCCEEEEETTTEEEEECTTCSC
T ss_pred CccceEECC--CCCEEEEccCCCCcEEEecCCCcccceEe--eCCcCCcceeEECC--CCCEEEEcCCCEEEEEeCCCce
Confidence 478999999 877666 4467889999997654321100 00001111111111 1111111112233333333322
Q ss_pred cccccCCCCCC---cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCC
Q 022870 143 TVDTDSLCDSK---DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ 219 (291)
Q Consensus 143 ~~~~~~~~~~~---~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 219 (291)
........... ++++++|. +++ +...++.|.+||..+........ .. ...+..+. +.|+
T Consensus 99 ~~~~~~~~~~~p~~i~~~~~g~-l~v-~~~~~~~i~~~~~~~~~~~~~~~--------~~----~~~p~~i~-~~~~--- 160 (270)
T 1rwi_B 99 QTVLPFDGLNYPEGLAVDTQGA-VYV-ADRGNNRVVKLAAGSKTQTVLPF--------TG----LNDPDGVA-VDNS--- 160 (270)
T ss_dssp CEECCCCSCSSEEEEEECTTCC-EEE-EEGGGTEEEEECTTCCSCEECCC--------CS----CCSCCCEE-ECTT---
T ss_pred EeeeecCCcCCCcceEECCCCC-EEE-EECCCCEEEEEECCCceeEeecc--------cc----CCCceeEE-EeCC---
Confidence 21111111112 88899886 444 33346889999876544322111 11 11344555 8886
Q ss_pred CceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCce
Q 022870 220 GFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 220 g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~ 286 (291)
|+ ++++...++.|.+||... .........+...+.+|+++++|.++++...++.|.+|+.++...
T Consensus 161 g~-l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 161 GN-VYVTDTDNNRVVKLEAES-NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp CC-EEEEEGGGTEEEEECTTT-CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred CC-EEEEECCCCEEEEEecCC-CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 54 667777788999999876 443333333336789999999998888887889999999876543
No 228
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.02 E-value=8.6e-11 Score=94.05 Aligned_cols=187 Identities=13% Similarity=0.081 Sum_probs=96.6
Q ss_pred CCCceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecC-CCCeEEEEeCC
Q 022870 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI-GLNKVISQGRD 85 (291)
Q Consensus 7 ~~~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~s~~~d 85 (291)
.++.+.+++. +++.+..+..++..+++++.||.|+.||.++++.+..+..+.. ..+. .+|.. ++..+++++.|
T Consensus 28 tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~-~~~~---~sp~~~~~~~v~~g~~d 101 (369)
T 2hz6_A 28 TGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP-ELVQ---ASPCRSSDGILYMGKKQ 101 (369)
T ss_dssp TCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH-HHHT---TCSCC-----CCCCEEE
T ss_pred CCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc-cccc---cCceEecCCEEEEEeCC
Confidence 3455666654 4566655666777888889999999999988887766554321 1111 11111 33677888899
Q ss_pred CeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEE
Q 022870 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (291)
Q Consensus 86 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
+.|+.||.++++... ...... . ..++|++..++
T Consensus 102 g~v~a~D~~tG~~~w----~~~~~~---~---------------------------------------~~~~p~~~~v~- 134 (369)
T 2hz6_A 102 DIWYVIDLLTGEKQQ----TLSSAF---A---------------------------------------DSLSPSTSLLY- 134 (369)
T ss_dssp EEEEEECCC--------------------------------------------------------------------EE-
T ss_pred CEEEEEECCCCcEEE----EecCCC---c---------------------------------------ccccccCCEEE-
Confidence 999999999987654 111111 0 11445555555
Q ss_pred EecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCce
Q 022870 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 245 (291)
Q Consensus 166 ~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~ 245 (291)
.++.|+.|+.||.++++.+..+... ...... +.++...+. .+++++.||.|+.||.++ ++.+
T Consensus 135 -~~~~dg~v~a~d~~tG~~~W~~~~~--------------~~~~~~-~~~~~~~~~-~v~~~~~dg~v~a~d~~t-G~~~ 196 (369)
T 2hz6_A 135 -LGRTEYTITMYDTKTRELRWNATYF--------------DYAASL-PEDDVDYKM-SHFVSNGDGLVVTVDSES-GDVL 196 (369)
T ss_dssp -EEEEEEEEECCCSSSSSCCCEEEEE--------------EECCBC-CCCCTTCCC-CEEEEETSCEEEEECTTT-CCEE
T ss_pred -EEecCCEEEEEECCCCCEEEeEecc--------------cccCcc-ccCCccccc-eEEEECCCCEEEEEECCC-CcEE
Confidence 3455899999999999877666520 011111 333210012 577788999999999998 7777
Q ss_pred eeccccccceeE-EEeecCCC
Q 022870 246 TAMKVHLEPVLC-LSIDESCN 265 (291)
Q Consensus 246 ~~~~~h~~~v~~-~~~~~~~~ 265 (291)
..... ..++.. ..+++++.
T Consensus 197 W~~~~-~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 197 WIQNY-ASPVVAFYVWQREGL 216 (369)
T ss_dssp EEEEC-SSCEEEEEECTTSSC
T ss_pred EEecC-CCceEEEEEecCCce
Confidence 77664 344433 34456654
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.99 E-value=2.6e-08 Score=85.96 Aligned_cols=58 Identities=19% Similarity=0.233 Sum_probs=46.6
Q ss_pred CcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 231 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 231 g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
|.|..||+.+ ++.+..+.. ..++.+..+...+.+++.++.||.+++||.++++.+..+
T Consensus 457 g~l~A~D~~t-G~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 457 GRLLAWDPVA-QKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EEEEEEETTT-TEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEeCCC-CcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeee
Confidence 7899999998 887777663 445556666667778888999999999999999998764
No 230
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.99 E-value=3.8e-08 Score=81.71 Aligned_cols=223 Identities=13% Similarity=0.058 Sum_probs=125.7
Q ss_pred CCCEEEEec-CCCeEEEEeCCCCeEEEEEeeecCCcceEEEEE-e-ecCCCCeEEEEe------------------CCCe
Q 022870 29 TKPILFAGT-TGGELRIWDTVQHRTVSSSWVHSAAHGIVSVAT-G-PSIGLNKVISQG------------------RDGT 87 (291)
Q Consensus 29 ~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~~~l~s~~------------------~dg~ 87 (291)
||++++... .++.|.+.|+.+.++...+..... .....+++ . | ++.++++++ .++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g-~~phg~~~~~~p--~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNA-KGIHGLRPQKWP--RSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSC-CSEEEEEECCSS--BCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCC-CCCcceeeeecC--CCcEEEEecccccccCCCCcccccccccCce
Confidence 788776654 466799999999998886654332 34788888 4 7 889988885 2457
Q ss_pred EEEEECCCCCCCCCCcccccc-ceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCC--cccCCCCCcEE
Q 022870 88 VKCWDIENGGLSSNPSLTIKT-NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK--DDVPAEGPKYM 164 (291)
Q Consensus 88 i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 164 (291)
+.+.|.++.+... ++.. ........+...................+...........-.... .++.++|+...
T Consensus 177 vtvID~~t~~v~~----qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 177 FTAVDADKWEVAW----QVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEETTTTEEEE----EEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred EEEEECCCCeEEE----EEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 8888888765433 1111 011111122221111111111111100000000000000000000 12345555544
Q ss_pred EEecCCcCeEEEEeCCC--cce-eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCC
Q 022870 165 AVAGEQLSEVEIWDLNT--AER-CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 241 (291)
Q Consensus 165 ~~~g~~d~~i~~wd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~ 241 (291)
+ +.|.+.|.++ ++. +..++. .....++. ++|| |++.++++-.+..|.++|+.+
T Consensus 253 i------~~V~VID~~~~~~~~~~~~Ipv-------------g~~PhGv~-~sPD---Gk~v~V~~~~s~~VsVid~~~- 308 (595)
T 1fwx_A 253 L------NGVKVVDGRKEASSLFTRYIPI-------------ANNPHGCN-MAPD---KKHLCVAGKLSPTVTVLDVTR- 308 (595)
T ss_dssp E------TTEEEEECSGGGCCSSEEEEEE-------------ESSCCCEE-ECTT---SSEEEEECTTSSBEEEEEGGG-
T ss_pred E------CcEEEEeCcccCCceeEEEEec-------------CCCceEEE-EcCC---CCEEEEeCCCCCeEEEEECcc-
Confidence 2 3489999987 444 444542 11234454 9998 665777777899999999986
Q ss_pred CC------------ceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCC
Q 022870 242 GI------------PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (291)
Q Consensus 242 ~~------------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~ 283 (291)
.+ .+..+.. ......++|+++|...++.-.|++|.+||++.
T Consensus 309 ~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 309 FDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp HHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred cccccccccCcccceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 31 2333332 24578899999996556777899999999987
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.97 E-value=6.9e-08 Score=77.49 Aligned_cols=198 Identities=15% Similarity=0.101 Sum_probs=118.3
Q ss_pred CCCCEE-EEecCCCeEEEEeCCCC----eEEEEEe---ee--cCCcceEEEEEeecCCCCeEEEEeCC------CeEEEE
Q 022870 28 QTKPIL-FAGTTGGELRIWDTVQH----RTVSSSW---VH--SAAHGIVSVATGPSIGLNKVISQGRD------GTVKCW 91 (291)
Q Consensus 28 ~~~~~l-~s~~~dg~v~iwd~~~~----~~~~~~~---~~--~~~~~v~~~~~~~~~~~~~l~s~~~d------g~i~iw 91 (291)
+++++| ++|..+++|.++|+.+. +..++++ .. .+...-..+...| +| .++++..+ |.|.++
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p--dG-i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP--DA-IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS--SC-EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC--Ce-EEEEcCCCcCCCCCCeEEEE
Confidence 777766 56777899999998754 6666663 10 0111246677889 87 77766655 789999
Q ss_pred ECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEec---
Q 022870 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG--- 168 (291)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--- 168 (291)
|.++.+.+. ++..... ... .-++ +.|+|+++.++ ++.
T Consensus 170 D~~T~~v~~----~~~~~~~------~~~-------------~~Yd----------------~~~~p~~~~mv-sS~wg~ 209 (462)
T 2ece_A 170 DHYSFEPLG----KWEIDRG------DQY-------------LAYD----------------FWWNLPNEVLV-SSEWAV 209 (462)
T ss_dssp CTTTCCEEE----ECCSBCT------TCC-------------CCCC----------------EEEETTTTEEE-ECBCCC
T ss_pred ECCCCeEEE----EEccCCC------Ccc-------------ccce----------------EEECCCCCEEE-EccCcC
Confidence 999887543 1111000 000 0000 33688887544 331
Q ss_pred ---------------CCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEE-EecCCCCCCceEEEeec----
Q 022870 169 ---------------EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQ-AYLPSKSQGFVNVLAGY---- 228 (291)
Q Consensus 169 ---------------~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~g~~~l~~g~---- 228 (291)
..+.+|.+||+.+++.+.++.. +. .......+. +|+|+ ++ ++++++
T Consensus 210 p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v-------g~---~g~~P~~i~f~~~Pd---g~-~aYV~~e~~~ 275 (462)
T 2ece_A 210 PNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL-------GE---ENRMALELRPLHDPT---KL-MGFINMVVSL 275 (462)
T ss_dssp HHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES-------CT---TEEEEEEEEECSSTT---CC-EEEEEEEEET
T ss_pred ccccccccchhhhhhccCCEEEEEECCCCcEeeEEec-------CC---CCCccceeEeeECCC---CC-EEEEEEeeec
Confidence 2358899999999888877763 11 112333333 15887 54 444444
Q ss_pred --CCCcEEEEEccCCCCc--ee-----------ec-------cccccceeEEEeecCCCeeEEec-CCCeEEEEEcCC
Q 022870 229 --EDGSILVWDIRNPGIP--LT-----------AM-------KVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDH 283 (291)
Q Consensus 229 --~dg~i~vwd~~~~~~~--~~-----------~~-------~~h~~~v~~~~~~~~~~~l~s~s-~dg~i~vw~~~~ 283 (291)
.++.|.+|.... +.. .+ .+ .+-...+..|.+++|+++|..+. ..+.|.++|+..
T Consensus 276 ~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 276 KDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp TTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred cCCCceEEEEEecC-CceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 667888766553 211 00 00 00023578899999999886555 468999999863
No 232
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.97 E-value=7.7e-08 Score=83.51 Aligned_cols=200 Identities=7% Similarity=-0.019 Sum_probs=120.1
Q ss_pred eEEEEcCCCCEEEEecCCC-------------eEEEEeCCCCeE--EEEEeeec-CCcceEEEEEeecCCCCeEEEEe--
Q 022870 22 TDVCFHQTKPILFAGTTGG-------------ELRIWDTVQHRT--VSSSWVHS-AAHGIVSVATGPSIGLNKVISQG-- 83 (291)
Q Consensus 22 ~~l~~~~~~~~l~s~~~dg-------------~v~iwd~~~~~~--~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~-- 83 (291)
..++|+ |++.|+.++.+. .|++|++.++.. ...+.... ....+.++.|+| ||++|+...
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp--Dg~~l~~~~~~ 254 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE--DDRFLLISAAN 254 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT--TSCEEEEEEES
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC--CCCEEEEEEcc
Confidence 578999 999888887774 499999987642 22233222 113378899999 998876433
Q ss_pred --CCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCC
Q 022870 84 --RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGP 161 (291)
Q Consensus 84 --~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
.+..|.++|+.++..... .+........ -.++++|.
T Consensus 255 ~~~~~~i~~~d~~~~~~~~~-~l~~~~~~~~-----------------------------------------~~~~~~g~ 292 (693)
T 3iuj_A 255 STSGNRLYVKDLSQENAPLL-TVQGDLDADV-----------------------------------------SLVDNKGS 292 (693)
T ss_dssp SSSCCEEEEEETTSTTCCCE-EEECSSSSCE-----------------------------------------EEEEEETT
T ss_pred CCCCcEEEEEECCCCCCceE-EEeCCCCceE-----------------------------------------EEEeccCC
Confidence 235899999987632110 0011110000 01456667
Q ss_pred cEEEEecCC--cCeEEEEeCCCcce--eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCC--cEEE
Q 022870 162 KYMAVAGEQ--LSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG--SILV 235 (291)
Q Consensus 162 ~~~~~~g~~--d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg--~i~v 235 (291)
.+++.+... .+.|..+|+.++.. ...+. .+... .. . |+|+ +..++++...++ .|++
T Consensus 293 ~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~--------~~~~~----~~--~-~s~~---g~~lv~~~~~~g~~~l~~ 354 (693)
T 3iuj_A 293 TLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI--------PERQQ----VL--T-VHSG---SGYLFAEYMVDATARVEQ 354 (693)
T ss_dssp EEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--------CCCSS----CE--E-EEEE---TTEEEEEEEETTEEEEEE
T ss_pred EEEEEECCCCCCCEEEEEeCCCCCccccEEEe--------cCCCC----EE--E-EEEE---CCEEEEEEEECCeeEEEE
Confidence 776655432 36899999987654 23444 23221 12 3 7776 442444445555 6888
Q ss_pred EEccCCCCceeecc-ccccceeEEEeecCCCeeEEecCC----CeEEEEEcCCCce
Q 022870 236 WDIRNPGIPLTAMK-VHLEPVLCLSIDESCNGGISGGAD----QKIVLYNLDHSTV 286 (291)
Q Consensus 236 wd~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d----g~i~vw~~~~~~~ 286 (291)
||+.. .....+. ...+.+..+.+++++..|+....+ +.+..||+.+++.
T Consensus 355 ~d~~g--~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 355 FDYEG--KRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp ECTTS--CEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EECCC--CeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 98874 3344443 234567788888888777655444 7899999987753
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.95 E-value=3.5e-06 Score=64.04 Aligned_cols=207 Identities=5% Similarity=-0.051 Sum_probs=123.2
Q ss_pred cceeEEEEcCCCC-EEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEE-EEeCCCeEEEEECCCC
Q 022870 19 ASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENG 96 (291)
Q Consensus 19 ~~v~~l~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~ 96 (291)
..+..++|++++. ++++-..++.|..++...+.....+.... .....+++.+ ++..|+ +-...+.|.++++...
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~--~~p~~ia~d~--~~~~lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL--GSPEGIALDH--LGRTIFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC--CCEEEEEEET--TTTEEEEEETTTTEEEEEETTSC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC--CCccEEEEEe--cCCeEEEEECCCCEEEEEEcCCC
Confidence 4567899999654 44555667899999987654333232211 2378999998 655555 4455678999998653
Q ss_pred CCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCC-cCeEE
Q 022870 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQ-LSEVE 175 (291)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-d~~i~ 175 (291)
.... ........ +. .++++|++.+++++.... .+.|.
T Consensus 112 ~~~~--~~~~~~~~-----------P~-----------------------------~i~vd~~~g~lyv~~~~~~~~~I~ 149 (267)
T 1npe_A 112 QRRV--LFDTGLVN-----------PR-----------------------------GIVTDPVRGNLYWTDWNRDNPKIE 149 (267)
T ss_dssp SCEE--EECSSCSS-----------EE-----------------------------EEEEETTTTEEEEEECCSSSCEEE
T ss_pred CEEE--EEECCCCC-----------cc-----------------------------EEEEeeCCCEEEEEECCCCCcEEE
Confidence 2100 00000000 00 056888766666543221 46888
Q ss_pred EEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccce
Q 022870 176 IWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV 255 (291)
Q Consensus 176 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v 255 (291)
.+++.... ...+.. . .......++ ++|+ +..++++-...+.|.++|... ......+.. ....
T Consensus 150 ~~~~dg~~-~~~~~~-------~----~~~~P~gia-~d~~---~~~lyv~d~~~~~I~~~~~~g-~~~~~~~~~-~~~P 211 (267)
T 1npe_A 150 TSHMDGTN-RRILAQ-------D----NLGLPNGLT-FDAF---SSQLCWVDAGTHRAECLNPAQ-PGRRKVLEG-LQYP 211 (267)
T ss_dssp EEETTSCC-CEEEEC-------T----TCSCEEEEE-EETT---TTEEEEEETTTTEEEEEETTE-EEEEEEEEC-CCSE
T ss_pred EEecCCCC-cEEEEE-------C----CCCCCcEEE-EcCC---CCEEEEEECCCCEEEEEecCC-CceEEEecC-CCCc
Confidence 88876432 222221 0 112355665 8886 332556666778999999874 332222222 2345
Q ss_pred eEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 256 LCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 256 ~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
.+++.+ .+.++++....+.|.++|.++++.+..+
T Consensus 212 ~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 212 FAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTF 245 (267)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEE
Confidence 678776 4555566666789999999999887765
No 234
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.94 E-value=4.2e-07 Score=67.72 Aligned_cols=169 Identities=11% Similarity=0.012 Sum_probs=112.4
Q ss_pred eEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCC
Q 022870 51 RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQAN 130 (291)
Q Consensus 51 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (291)
+.+.++ .|........+.|+. +.++.+.+.+|.|+.+|+++++...+. +.......
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~~---~~Ly~stG~~g~v~~iD~~Tgkv~~~~---l~~~~Fge----------------- 99 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFHQ---GHFFESTGHQGTLRQLSLESAQPVWME---RLGNIFAE----------------- 99 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET---TEEEEEETTTTEEEECCSSCSSCSEEE---ECTTCCEE-----------------
T ss_pred EEEEEE-cCCCccccceEEEEC---CEEEEEcCCCCEEEEEECCCCcEEeEE---CCCCccee-----------------
Confidence 344444 344444467888875 367778888999999999999875521 21111000
Q ss_pred CCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeE
Q 022870 131 EPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAV 210 (291)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (291)
...++++.++++ .-.++.+.+||..+.+.+.+++.. ..+ +.+
T Consensus 100 ------------------------Git~~g~~Ly~l-tw~~~~v~V~D~~Tl~~~~ti~~~-----------~eG--wGL 141 (268)
T 3nok_A 100 ------------------------GLASDGERLYQL-TWTEGLLFTWSGMPPQRERTTRYS-----------GEG--WGL 141 (268)
T ss_dssp ------------------------EEEECSSCEEEE-ESSSCEEEEEETTTTEEEEEEECS-----------SCC--CCE
T ss_pred ------------------------EEEEeCCEEEEE-EccCCEEEEEECCcCcEEEEEeCC-----------Cce--eEE
Confidence 022345566664 445899999999999999998731 122 232
Q ss_pred EEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeecccc--c---cceeEEEeecCCCeeEEecCCCeEEEEEcCCCc
Q 022870 211 QAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH--L---EPVLCLSIDESCNGGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 211 ~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h--~---~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~ 285 (291)
.++ ++ .|+.+..++.|.++|..+ .+.+..+... . ..++.+.|. +|...+..-.++.|.+-|.++++
T Consensus 142 ---t~D---g~-~L~vSdGs~~l~~iDp~T-~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 142 ---CYW---NG-KLVRSDGGTMLTFHEPDG-FALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGT 212 (268)
T ss_dssp ---EEE---TT-EEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCB
T ss_pred ---ecC---CC-EEEEECCCCEEEEEcCCC-CeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCc
Confidence 333 44 565556689999999998 7777766532 2 245778887 66666666568899999999999
Q ss_pred eeeee
Q 022870 286 VSHCV 290 (291)
Q Consensus 286 ~~~~~ 290 (291)
++..+
T Consensus 213 V~~~I 217 (268)
T 3nok_A 213 VVGVI 217 (268)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88764
No 235
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.94 E-value=1.5e-07 Score=74.60 Aligned_cols=228 Identities=10% Similarity=-0.036 Sum_probs=123.0
Q ss_pred CCccceeEEEEcCCCCEEEEecC-----CCeEEEEeCCCCeEEEEEeeecC----CcceEEEEEeecCCCCeE-EEEe--
Q 022870 16 GHRASVTDVCFHQTKPILFAGTT-----GGELRIWDTVQHRTVSSSWVHSA----AHGIVSVATGPSIGLNKV-ISQG-- 83 (291)
Q Consensus 16 ~h~~~v~~l~~~~~~~~l~s~~~-----dg~v~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l-~s~~-- 83 (291)
+|-..+..++++++++++++-.. ++.|.+||+.+++.+..+..... ...+..+++.+ ++..+ ++-.
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~--~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDL--IHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEET--TTTEEEEEECCS
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEec--CCCEEEEEcCcc
Confidence 46678999999999876665433 57899999999987777754321 12368999997 54454 4544
Q ss_pred -CCCeEEEEECCCCCCCCCCccccc-cceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCC
Q 022870 84 -RDGTVKCWDIENGGLSSNPSLTIK-TNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGP 161 (291)
Q Consensus 84 -~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
.++.|.+||+.+++... ....+ ........+.+....... ....+....+ ..+-..++|+|+++
T Consensus 142 ~~~~~i~v~d~~~g~~~r--~~~~~~~~~~~~~~~~~~g~~~~~-~~~~g~~~~~-----------~~~~~gia~s~dg~ 207 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAAR--VLQGYPGIAPEDIDLVIDGVPVQI-GQPDGTVIRP-----------HLGVNGIVLDAENE 207 (343)
T ss_dssp GGGCEEEEEETTTCCEEE--ECTTCTTTSCCSCCCEETTEECBE-ECTTSCEECC-----------CCCEEEEEECTTSC
T ss_pred CCCCeEEEEECCCCCEEE--EecCCCcccccccceeECCEEEEe-ccCCCceece-----------ecccceeEeccCCC
Confidence 67899999998765322 11000 000000000000000000 0000000000 00011188999998
Q ss_pred cEEEEecCCcCeEEEEeCCC---cc-----eeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcE
Q 022870 162 KYMAVAGEQLSEVEIWDLNT---AE-----RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 233 (291)
Q Consensus 162 ~~~~~~g~~d~~i~~wd~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i 233 (291)
.++++. .....+..++... +. ....+... ++ .+....++ +.++ |. ++++...++.|
T Consensus 208 ~ly~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------g~----~g~pdgia-~d~~---G~-l~va~~~~~~V 271 (343)
T 2qe8_A 208 WLYLSP-MHSTSMYRIKSADLSNLQLTDAELGSKIERY------SE----KPICDGIS-IDKD---HN-IYVGDLAHSAI 271 (343)
T ss_dssp EEEEEE-SSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE------EE----CCSCSCEE-ECTT---CC-EEEEEGGGTEE
T ss_pred EEEEEe-CCCCeEEEEEHHHhcCCCCChhhhhcceEec------cc----CCCCceEE-ECCC---CC-EEEEccCCCeE
Confidence 776543 3234565555321 10 00000000 11 11233454 8887 54 77888889999
Q ss_pred EEEEccCCCCceeeccc-cccceeEEEeecCCCeeEEecCCCeE
Q 022870 234 LVWDIRNPGIPLTAMKV-HLEPVLCLSIDESCNGGISGGADQKI 276 (291)
Q Consensus 234 ~vwd~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~dg~i 276 (291)
.+||..+ ++....... +...+.+++|++++.++++.+..+.+
T Consensus 272 ~~~d~~~-G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 272 GVITSAD-RAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp EEEETTT-TEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred EEEECCC-CCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 9999844 443222221 24568999999999888887754443
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.92 E-value=1.6e-07 Score=81.24 Aligned_cols=58 Identities=16% Similarity=0.179 Sum_probs=45.9
Q ss_pred CCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 230 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 230 dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
+|.|+.||+.+ ++.+.++..+. ++..-.+...+.+++.++.||.|+.||.++++++-.
T Consensus 454 ~g~l~A~D~~t-G~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~ 511 (689)
T 1yiq_A 454 SGKLIAWDPVK-QQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWE 511 (689)
T ss_dssp EEEEEEEETTT-TEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ceeEEEEECCC-CCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCcccee
Confidence 47899999999 88888776543 334445566677889999999999999999998854
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.89 E-value=6.2e-07 Score=67.53 Aligned_cols=172 Identities=9% Similarity=-0.024 Sum_probs=109.7
Q ss_pred eEEEEEeeecCCcceEEEEEeecCCCCeEEEEeC--CCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceecc
Q 022870 51 RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR--DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQ 128 (291)
Q Consensus 51 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (291)
+.+.++. |........+.|++ ++.++++.+. ++.|.+.|+.+++... ...+......
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~--dg~Lyvstg~~~~s~v~~iD~~tg~v~~--~i~l~~~~fg---------------- 68 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAE--NDTLFESTGLYGRSSVRQVALQTGKVEN--IHKMDDSYFG---------------- 68 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECS--TTEEEEEECSTTTCEEEEEETTTCCEEE--EEECCTTCCE----------------
T ss_pred eEEEEEE-CCCCCCcccEEEeC--CCeEEEECCCCCCCEEEEEECCCCCEEE--EEecCCCcce----------------
Confidence 3455553 33222368999999 8544444443 5799999999987644 1111111110
Q ss_pred CCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeee
Q 022870 129 ANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCM 208 (291)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (291)
..+.+++..+++ +...++.+.++|..+.+.+.++.. + . ..+ +
T Consensus 69 -------------------------eGi~~~g~~lyv-~t~~~~~v~viD~~t~~v~~~i~~-------g-~--~~g--~ 110 (266)
T 2iwa_A 69 -------------------------EGLTLLNEKLYQ-VVWLKNIGFIYDRRTLSNIKNFTH-------Q-M--KDG--W 110 (266)
T ss_dssp -------------------------EEEEEETTEEEE-EETTCSEEEEEETTTTEEEEEEEC-------C-S--SSC--C
T ss_pred -------------------------EEEEEeCCEEEE-EEecCCEEEEEECCCCcEEEEEEC-------C-C--CCe--E
Confidence 002233456665 455689999999999999888873 2 0 122 2
Q ss_pred eEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccc-----cceeEEEeecCCCeeEEecCCCeEEEEEcCC
Q 022870 209 AVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHL-----EPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (291)
Q Consensus 209 ~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~ 283 (291)
. ++++ |+ .++++..++.|.++|..+ .+.+..+.-.. ..++.+.|. ++...+..-.++.|.+-|..+
T Consensus 111 g---lt~D---g~-~l~vs~gs~~l~viD~~t-~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~t 181 (266)
T 2iwa_A 111 G---LATD---GK-ILYGSDGTSILYEIDPHT-FKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKD 181 (266)
T ss_dssp E---EEEC---SS-SEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTT
T ss_pred E---EEEC---CC-EEEEECCCCeEEEEECCC-CcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCC
Confidence 2 4445 33 444555688999999998 67666665321 246788888 676666666788999999999
Q ss_pred Cceeeee
Q 022870 284 STVSHCV 290 (291)
Q Consensus 284 ~~~~~~~ 290 (291)
++.+..+
T Consensus 182 g~V~~~I 188 (266)
T 2iwa_A 182 GTLLGWI 188 (266)
T ss_dssp CCEEEEE
T ss_pred CcEEEEE
Confidence 9988764
No 238
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.88 E-value=9.6e-07 Score=65.22 Aligned_cols=170 Identities=16% Similarity=0.106 Sum_probs=110.3
Q ss_pred eEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC--eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceecc
Q 022870 51 RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG--TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQ 128 (291)
Q Consensus 51 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (291)
+.+.++ .|........+.|++ + .++.+.+.+| .|+.+|+.+++... ...+.......
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~--~-~LyestG~~g~S~v~~vD~~tgkv~~--~~~l~~~~fge--------------- 68 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR--G-HLYESTGETGRSSVRKVDLETGRILQ--RAEVPPPYFGA--------------- 68 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET--T-EEEEEECCTTSCEEEEEETTTCCEEE--EEECCTTCCEE---------------
T ss_pred EEEEEc-CCCCccccccEEEEC--C-EEEEECCCCCCceEEEEECCCCCEEE--EEeCCCCccee---------------
Confidence 345555 466556688999986 3 5666666654 89999999997644 11111111100
Q ss_pred CCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeee
Q 022870 129 ANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCM 208 (291)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (291)
...+.+..++..+ -.++.+.+||..+.+.+.+++.. ..+ +
T Consensus 69 --------------------------Gi~~~~~~ly~lt-w~~~~v~v~D~~tl~~~~ti~~~-----------~~G--w 108 (243)
T 3mbr_X 69 --------------------------GIVAWRDRLIQLT-WRNHEGFVYDLATLTPRARFRYP-----------GEG--W 108 (243)
T ss_dssp --------------------------EEEEETTEEEEEE-SSSSEEEEEETTTTEEEEEEECS-----------SCC--C
T ss_pred --------------------------EEEEeCCEEEEEE-eeCCEEEEEECCcCcEEEEEeCC-----------CCc--e
Confidence 0222345666644 45799999999999999998831 122 3
Q ss_pred eEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccc-----cceeEEEeecCCCeeEEecCCCeEEEEEcCC
Q 022870 209 AVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHL-----EPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (291)
Q Consensus 209 ~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~ 283 (291)
.+ .++ +. .|+.+..++.|.++|..+ .+.+..+.-.. ..++.+.|. +|...+..-.+..|.+.|.++
T Consensus 109 gl---t~d---g~-~L~vSdgs~~l~~iDp~t-~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 109 AL---TSD---DS-HLYMSDGTAVIRKLDPDT-LQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp EE---EEC---SS-CEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTT
T ss_pred EE---eeC---CC-EEEEECCCCeEEEEeCCC-CeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCC
Confidence 33 333 33 455555688999999998 77776665322 345677776 556556665678999999999
Q ss_pred Cceeeee
Q 022870 284 STVSHCV 290 (291)
Q Consensus 284 ~~~~~~~ 290 (291)
++++..+
T Consensus 180 G~V~~~i 186 (243)
T 3mbr_X 180 GKVVAWI 186 (243)
T ss_dssp CBEEEEE
T ss_pred CCEEEEE
Confidence 9988654
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.87 E-value=1.8e-07 Score=77.77 Aligned_cols=222 Identities=9% Similarity=0.095 Sum_probs=137.9
Q ss_pred cceeEEEE-c-CCCCEEEEec------------------CCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCe
Q 022870 19 ASVTDVCF-H-QTKPILFAGT------------------TGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNK 78 (291)
Q Consensus 19 ~~v~~l~~-~-~~~~~l~s~~------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 78 (291)
.....+++ + |++.+++.++ .++.+.+.|.++.+...++..... -..++++| +|++
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~---pd~~~~sp--dGk~ 208 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGN---LDNCDADY--EGKW 208 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSC---CCCEEECS--SSSE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCC---ccceEECC--CCCE
Confidence 45778887 5 8999998884 356899999999999888876432 46777999 9999
Q ss_pred EEEEeCCC---------------eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeeccc--C
Q 022870 79 VISQGRDG---------------TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV--G 141 (291)
Q Consensus 79 l~s~~~dg---------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 141 (291)
+++.+.+. .|.+.|...... ........ .. +...+++... .
T Consensus 209 ~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~------~v~~Gk~~-------------~i---~~V~VID~~~~~~ 266 (595)
T 1fwx_A 209 AFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK------AIAAGDYQ-------------EL---NGVKVVDGRKEAS 266 (595)
T ss_dssp EEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH------HHHHTCSE-------------EE---TTEEEEECSGGGC
T ss_pred EEEEecCcccCcchhhccccccceEEEeeccceeE------eccCCCee-------------EE---CcEEEEeCcccCC
Confidence 99888663 355555432210 00000000 00 2244455544 2
Q ss_pred ccccccC-CCCCC--cccCCCCCcEEEEecCCcCeEEEEeCCCcc------------eeeEecccccCCCCCCCCCccee
Q 022870 142 ETVDTDS-LCDSK--DDVPAEGPKYMAVAGEQLSEVEIWDLNTAE------------RCTRLHQNSCGGSPNFSSKGRGM 206 (291)
Q Consensus 142 ~~~~~~~-~~~~~--~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 206 (291)
....... .+... +.++|||+++++ ++..+..|.++|+.+.+ .....+ ....
T Consensus 267 ~~~~~~Ipvg~~PhGv~~sPDGk~v~V-~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-------------vG~g 332 (595)
T 1fwx_A 267 SLFTRYIPIANNPHGCNMAPDKKHLCV-AGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-------------LGLG 332 (595)
T ss_dssp CSSEEEEEEESSCCCEEECTTSSEEEE-ECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-------------CCSC
T ss_pred ceeEEEEecCCCceEEEEcCCCCEEEE-eCCCCCeEEEEECcccccccccccCcccceEEEcC-------------CCCC
Confidence 2211111 11111 899999988776 56668999999999653 122222 1223
Q ss_pred eeeEEEecCCCCCCceEEEeecCCCcEEEEEccCC---------CCceeeccccccce-----eEEEeecCCCeeEEecC
Q 022870 207 CMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP---------GIPLTAMKVHLEPV-----LCLSIDESCNGGISGGA 272 (291)
Q Consensus 207 ~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~---------~~~~~~~~~h~~~v-----~~~~~~~~~~~l~s~s~ 272 (291)
..-++ |+|+ |. ..++...|+.|.+||+... .+.+..+..|-.+- .++..++||++|++...
T Consensus 333 P~h~a-F~~d---G~-aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 333 PLHTA-FDGR---GN-AYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEEEE-ECTT---SE-EEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred cceEE-ECCC---Ce-EEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 44554 9998 53 7778888999999998751 34555565554432 23355899999988753
Q ss_pred ---CCe----------EEEEEcCCCce
Q 022870 273 ---DQK----------IVLYNLDHSTV 286 (291)
Q Consensus 273 ---dg~----------i~vw~~~~~~~ 286 (291)
|.. -.++|+..+++
T Consensus 408 ~skdr~~~~gp~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 408 FSKDRFLNVGPLKPENDQLIDISGDKM 434 (595)
T ss_dssp CCTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred CCccccccCCCCCCCcceEEEcCCCcE
Confidence 432 18899976653
No 240
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.86 E-value=4.5e-06 Score=66.83 Aligned_cols=235 Identities=11% Similarity=0.059 Sum_probs=126.3
Q ss_pred CCCEEEEecCCCeEEEEeCCCCeEEEEEeeecC-------CcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCC
Q 022870 29 TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-------AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSN 101 (291)
Q Consensus 29 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 101 (291)
.+..++.++.++.|..+|.++++.+........ ...+.+.-.. ++..++.++.++.|..+|.++++...+
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~v~~~~g~l~a~d~~tG~~~W~ 128 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV---SGGHVYIGSEKAQVYALNTSDGTVAWQ 128 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE---ETTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE---eCCEEEEEcCCCEEEEEECCCCCEEEE
Confidence 455788888899999999999998877665321 1123222222 347888899999999999998876431
Q ss_pred CccccccceEEEEEeecccCccceeccCCCCceeeecccCcccccc-CCC-------CCCcccCCCCCcEEEEecCCcCe
Q 022870 102 PSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTD-SLC-------DSKDDVPAEGPKYMAVAGEQLSE 173 (291)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~g~~d~~ 173 (291)
............ .. ..........+....++....+..-.. ... ....... +..++ .+..++.
T Consensus 129 --~~~~~~~~~~p~--~~-~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~--~g~~~g~ 199 (376)
T 3q7m_A 129 --TKVAGEALSRPV--VS-DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAV--VGGDNGR 199 (376)
T ss_dssp --EECSSCCCSCCE--EE-TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEE--ECCTTTE
T ss_pred --EeCCCceEcCCE--EE-CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEE--EEcCCCE
Confidence 111110000000 00 001111111222333333333221111 100 0111122 23444 3556899
Q ss_pred EEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeecccccc
Q 022870 174 VEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLE 253 (291)
Q Consensus 174 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~ 253 (291)
+..+|.++++.+......... +. .+.. ....+. -.|.-.++ .++.++.++.+..+|.++ ++.+..... .
T Consensus 200 l~~~d~~tG~~~w~~~~~~~~---~~-~~~~-~~~~~~-~~p~~~~~--~v~~~~~~g~l~~~d~~t-G~~~w~~~~--~ 268 (376)
T 3q7m_A 200 VSAVLMEQGQMIWQQRISQAT---GS-TEID-RLSDVD-TTPVVVNG--VVFALAYNGNLTALDLRS-GQIMWKREL--G 268 (376)
T ss_dssp EEEEETTTCCEEEEEECCC----------------CCC-CCCEEETT--EEEEECTTSCEEEEETTT-CCEEEEECC--C
T ss_pred EEEEECCCCcEEEEEecccCC---CC-cccc-cccccC-CCcEEECC--EEEEEecCcEEEEEECCC-CcEEeeccC--C
Confidence 999999999887766521000 00 0000 000000 11110112 678888899999999998 776655542 2
Q ss_pred ceeEEEeecCCCeeEEecCCCeEEEEEcCCCceee
Q 022870 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 254 ~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
....+..+ +..|+.++.++.|..+|.++++.+-
T Consensus 269 ~~~~~~~~--~~~l~~~~~~g~l~~~d~~tG~~~w 301 (376)
T 3q7m_A 269 SVNDFIVD--GNRIYLVDQNDRVMALTIDGGVTLW 301 (376)
T ss_dssp CEEEEEEE--TTEEEEEETTCCEEEEETTTCCEEE
T ss_pred CCCCceEE--CCEEEEEcCCCeEEEEECCCCcEEE
Confidence 34455554 3367777789999999999988753
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.85 E-value=8.3e-07 Score=66.14 Aligned_cols=169 Identities=13% Similarity=0.097 Sum_probs=109.8
Q ss_pred EEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC--eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccC
Q 022870 52 TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG--TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQA 129 (291)
Q Consensus 52 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (291)
.+.++ .|........+.|+. +.++.+.+.+| .|+.+|+++++...+ ..+......
T Consensus 33 vv~~~-phd~~~ftqGL~~~~---~~LyestG~~g~S~v~~vD~~Tgkv~~~--~~l~~~~Fg----------------- 89 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYRN---GYFYESTGLNGRSSIRKVDIESGKTLQQ--IELGKRYFG----------------- 89 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEET---TEEEEEEEETTEEEEEEECTTTCCEEEE--EECCTTCCE-----------------
T ss_pred EEEEe-cCCCCcccceEEEEC---CEEEEECCCCCCceEEEEECCCCcEEEE--EecCCccce-----------------
Confidence 44555 355444567888874 36666777766 899999999876441 111111000
Q ss_pred CCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeee
Q 022870 130 NEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMA 209 (291)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (291)
..+.++++.+++++ -.++.+.+||..+.+.+.+++.. ..+ +.
T Consensus 90 ------------------------eGit~~g~~ly~lt-w~~~~v~v~D~~t~~~~~ti~~~-----------~eG--~g 131 (262)
T 3nol_A 90 ------------------------EGISDWKDKIVGLT-WKNGLGFVWNIRNLRQVRSFNYD-----------GEG--WG 131 (262)
T ss_dssp ------------------------EEEEEETTEEEEEE-SSSSEEEEEETTTCCEEEEEECS-----------SCC--CC
T ss_pred ------------------------eEEEEeCCEEEEEE-eeCCEEEEEECccCcEEEEEECC-----------CCc--eE
Confidence 01223456666644 45799999999999999998731 122 22
Q ss_pred EEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeecccc--c---cceeEEEeecCCCeeEEecCCCeEEEEEcCCC
Q 022870 210 VQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH--L---EPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 210 ~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h--~---~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~ 284 (291)
+.++ ++ .|+....++.|.++|..+ .+.+..+... . ..++.+.|. +|...+..-.++.|.+.|.+++
T Consensus 132 ---lt~d---g~-~L~~SdGs~~i~~iDp~T-~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG 202 (262)
T 3nol_A 132 ---LTHN---DQ-YLIMSDGTPVLRFLDPES-LTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETG 202 (262)
T ss_dssp ---EEEC---SS-CEEECCSSSEEEEECTTT-CSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTC
T ss_pred ---EecC---CC-EEEEECCCCeEEEEcCCC-CeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCC
Confidence 3334 33 455555578999999998 7777665532 2 335567886 6666666667889999999999
Q ss_pred ceeeee
Q 022870 285 TVSHCV 290 (291)
Q Consensus 285 ~~~~~~ 290 (291)
+++..+
T Consensus 203 ~V~~~I 208 (262)
T 3nol_A 203 KVTGII 208 (262)
T ss_dssp BEEEEE
T ss_pred cEEEEE
Confidence 988764
No 242
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.81 E-value=8.4e-07 Score=76.64 Aligned_cols=229 Identities=10% Similarity=0.041 Sum_probs=130.1
Q ss_pred eEEEEcCCCCEEEEecCCC-------------------eEEEEeCCCCeEEEEEeeecCC-------cceEEEEEeecCC
Q 022870 22 TDVCFHQTKPILFAGTTGG-------------------ELRIWDTVQHRTVSSSWVHSAA-------HGIVSVATGPSIG 75 (291)
Q Consensus 22 ~~l~~~~~~~~l~s~~~dg-------------------~v~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~ 75 (291)
..++++|++.+++.+..++ .|..+|..+|+.+..++...+. ....-+.... +
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~--d 323 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI--A 323 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE--T
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEeccc--C
Confidence 4578889888888887764 5999999999998887653210 1122334444 6
Q ss_pred C---CeEEEEeCCCeEEEEECCCCCCCCCCccccccceEE-EEEeecccCccceeccCCCCceeeecccCc-cccccCCC
Q 022870 76 L---NKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYH-FCKLSLVKEPYANAKQANEPKDCYEREVGE-TVDTDSLC 150 (291)
Q Consensus 76 ~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 150 (291)
| ..++.++.+|.|+++|.++++.+. ..+..... ...+.....+.... . ....... ...-...+
T Consensus 324 G~~~~~l~~~~~~G~l~~lD~~tG~~l~----~~~~~~~~~~~~~d~~g~~~~~~-----~---~~~~~~~~~~~P~~~G 391 (677)
T 1kb0_A 324 GKPRKVILHAPKNGFFFVLDRTNGKFIS----AKNFVPVNWASGYDKHGKPIGIA-----A---ARDGSKPQDAVPGPYG 391 (677)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEE----EEESSCCSSEEEECTTSCEEECG-----G---GGCTTSCEECSSCTTC
T ss_pred CcEeeEEEEECCCCEEEEEECCCCCEec----cccccccCcccccCCCCceeecc-----c---cCcCCCccEECcCccc
Confidence 6 678899999999999999997643 11111000 00000000000000 0 0000000 00000111
Q ss_pred CC---CcccCCCCCcEEEEecC-----------------------------------------CcCeEEEEeCCCcceee
Q 022870 151 DS---KDDVPAEGPKYMAVAGE-----------------------------------------QLSEVEIWDLNTAERCT 186 (291)
Q Consensus 151 ~~---~~~~~~~~~~~~~~~g~-----------------------------------------~d~~i~~wd~~~~~~~~ 186 (291)
.. .++++|++..+++.+.. ..+.|..||+.+++.+.
T Consensus 392 ~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W 471 (677)
T 1kb0_A 392 AHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAW 471 (677)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEE
T ss_pred ccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEe
Confidence 11 16677776655542210 13789999999999887
Q ss_pred EecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccc-cceeEEEeecCCC
Q 022870 187 RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHL-EPVLCLSIDESCN 265 (291)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~-~~v~~~~~~~~~~ 265 (291)
+++. +. ...... +.+. +. .++.++.||.+++||.++ ++.+..+.... ....-+.|..+|+
T Consensus 472 ~~~~-------~~------~~~~g~-~~~~---g~-~v~~g~~dg~l~a~D~~t-G~~lw~~~~~~~~~~~p~~y~~~G~ 532 (677)
T 1kb0_A 472 SVEH-------VS------PWNGGT-LTTA---GN-VVFQGTADGRLVAYHAAT-GEKLWEAPTGTGVVAAPSTYMVDGR 532 (677)
T ss_dssp EEEE-------SS------SCCCCE-EEET---TT-EEEEECTTSEEEEEETTT-CCEEEEEECSSCCCSCCEEEEETTE
T ss_pred ecCC-------CC------CCcCcc-eEeC---CC-EEEEECCCCcEEEEECCC-CceeeeeeCCCCcccCCEEEEeCCE
Confidence 7763 11 111111 3333 33 678889999999999999 88888887433 2334456667776
Q ss_pred eeEEe-cC----------------CCeEEEEEcCC
Q 022870 266 GGISG-GA----------------DQKIVLYNLDH 283 (291)
Q Consensus 266 ~l~s~-s~----------------dg~i~vw~~~~ 283 (291)
.+++. +. .+.+.+|.+..
T Consensus 533 ~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 533 QYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp EEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred EEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence 54432 22 36777777763
No 243
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.81 E-value=2.5e-07 Score=73.43 Aligned_cols=54 Identities=13% Similarity=-0.103 Sum_probs=45.7
Q ss_pred eEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEe----------CCCeEEEEECCCCCCCC
Q 022870 41 ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTVKCWDIENGGLSS 100 (291)
Q Consensus 41 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~ 100 (291)
+|.+.|..+++.+.++.... .| .+.++| |+++++++. .++.|.+||..+.+...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~--~P--~i~~sp--Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF--LS--LAVAGH--SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT--TC--EEEECT--TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred eEEEEECCCCeEEEEEeCCC--CC--ceEECC--CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 88899999999999988765 45 799999 999998876 47899999999987543
No 244
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.80 E-value=1.3e-05 Score=60.02 Aligned_cols=222 Identities=9% Similarity=0.022 Sum_probs=128.6
Q ss_pred EecCCccceeEEEEcCCCCEE-EEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEE
Q 022870 13 VLRGHRASVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (291)
Q Consensus 13 ~l~~h~~~v~~l~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iw 91 (291)
.+.+-.+.+..++|+|++..| ++...++.|...|.. ++.+..+..... .....|++.+ ++.++++.-.++.+.++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~--~g~~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIG--DNQFVISDERDYAIYVI 96 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECS--TTEEEEEETTTTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeC--CCEEEEEECCCCcEEEE
Confidence 455666789999999976555 557778999999987 888887754321 2378888888 76666666667889999
Q ss_pred ECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCc
Q 022870 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL 171 (291)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d 171 (291)
++....... .. ....+.....+ .-.+-..++++|.+..++++.....
T Consensus 97 ~v~~~~~i~----~~-----~~~~~~~~~~~------------------------~N~g~EGLA~d~~~~~L~va~E~~p 143 (255)
T 3qqz_A 97 SLTPNSEVK----IL-----KKIKIPLQESP------------------------TNCGFEGLAYSRQDHTFWFFKEKNP 143 (255)
T ss_dssp EECTTCCEE----EE-----EEEECCCSSCC------------------------CSSCCEEEEEETTTTEEEEEEESSS
T ss_pred EcCCCCeee----ee-----eeecccccccc------------------------ccCCcceEEEeCCCCEEEEEECcCC
Confidence 887643110 00 00000000000 0000011889999988887554422
Q ss_pred CeEEEEeC-CCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccc
Q 022870 172 SEVEIWDL-NTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV 250 (291)
Q Consensus 172 ~~i~~wd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 250 (291)
..|..|+- .....+..+........ .+ ..-..++. |.|.. ++ +++....+..|.++|.. ++++..+.-
T Consensus 144 ~~i~~~~g~~~~~~l~i~~~~~~~~~-~~----~~d~S~l~-~dp~t--g~-lliLS~~s~~L~~~d~~--g~~~~~~~L 212 (255)
T 3qqz_A 144 IEVYKVNGLLSSNELHISKDKALQRQ-FT----LDDVSGAE-FNQQK--NT-LLVLSHESRALQEVTLV--GEVIGEMSL 212 (255)
T ss_dssp EEEEEEESTTCSSCCEEEECHHHHHT-CC----SSCCCEEE-EETTT--TE-EEEEETTTTEEEEECTT--CCEEEEEEC
T ss_pred ceEEEEcccccCCceeeecchhhccc-cc----cCCceeEE-EcCCC--Ce-EEEEECCCCeEEEEcCC--CCEEEEEEc
Confidence 25556651 01111222210000000 01 11245665 99872 55 77778888999999977 555544332
Q ss_pred cc---------cceeEEEeecCCCeeEEecCCCeEEEEEcCC
Q 022870 251 HL---------EPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (291)
Q Consensus 251 h~---------~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~ 283 (291)
.. ...-+|+|+++|++.++ ++-+.++++.-..
T Consensus 213 ~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~~~ 253 (255)
T 3qqz_A 213 TKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTPQS 253 (255)
T ss_dssp STTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC--
T ss_pred CCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEecC
Confidence 21 25689999999985555 6777777775443
No 245
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.79 E-value=7.3e-06 Score=64.16 Aligned_cols=214 Identities=11% Similarity=0.028 Sum_probs=119.3
Q ss_pred ecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeec------------------CCcceEEEEEeecCC
Q 022870 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHS------------------AAHGIVSVATGPSIG 75 (291)
Q Consensus 14 l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~------------------~~~~v~~~~~~~~~~ 75 (291)
+.+.-....++++++++++++++..++.|..||..+++.. .+.... .......+++.+ +
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~--~ 90 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL--Q 90 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET--T
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcC--C
Confidence 4443345677899999987888889999999998765433 222100 002368899986 4
Q ss_pred CCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcc
Q 022870 76 LNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDD 155 (291)
Q Consensus 76 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (291)
...|+.+...+.|..+|..++.... ....... .. + ..+. .++
T Consensus 91 ~g~l~v~d~~~~i~~~d~~~g~~~~--~~~~~~~-~~---~---~~p~-----------------------------~i~ 132 (322)
T 2fp8_A 91 NNQLYIVDCYYHLSVVGSEGGHATQ--LATSVDG-VP---F---KWLY-----------------------------AVT 132 (322)
T ss_dssp TTEEEEEETTTEEEEECTTCEECEE--EESEETT-EE---C---SCEE-----------------------------EEE
T ss_pred CCcEEEEECCCCEEEEeCCCCEEEE--ecccCCC-Cc---c---cccc-----------------------------eEE
Confidence 4566666555668888876543210 0000000 00 0 0000 045
Q ss_pred cCC-CCCcEEEEec----------------CCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCC
Q 022870 156 VPA-EGPKYMAVAG----------------EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS 218 (291)
Q Consensus 156 ~~~-~~~~~~~~~g----------------~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 218 (291)
+.+ +|. ++++.. ..++.|..||..+++...... . ......++ ++|+
T Consensus 133 ~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--------~-----~~~p~gia-~~~d-- 195 (322)
T 2fp8_A 133 VDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK--------E-----LHVPGGAE-VSAD-- 195 (322)
T ss_dssp ECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE--------E-----ESCCCEEE-ECTT--
T ss_pred EecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc--------C-----CccCcceE-ECCC--
Confidence 677 664 333221 124778999987665432222 0 11223454 9987
Q ss_pred CCceEEEeecCCCcEEEEEccCCC-CceeeccccccceeEEEeecCCCeeEEecC----------CCeEEEEEcCCCcee
Q 022870 219 QGFVNVLAGYEDGSILVWDIRNPG-IPLTAMKVHLEPVLCLSIDESCNGGISGGA----------DQKIVLYNLDHSTVS 287 (291)
Q Consensus 219 ~g~~~l~~g~~dg~i~vwd~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~----------dg~i~vw~~~~~~~~ 287 (291)
|+.++++-..++.|++|++.... .....+....+ ...++++++|++.++... .+.|..+|.+ ++++
T Consensus 196 -g~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~ 272 (322)
T 2fp8_A 196 -SSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNIL 272 (322)
T ss_dssp -SSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEE
T ss_pred -CCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEE
Confidence 44234444667899999987411 11111111123 788999999987766544 4667788764 5544
Q ss_pred e
Q 022870 288 H 288 (291)
Q Consensus 288 ~ 288 (291)
.
T Consensus 273 ~ 273 (322)
T 2fp8_A 273 E 273 (322)
T ss_dssp E
T ss_pred E
Confidence 3
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.72 E-value=1.3e-06 Score=68.52 Aligned_cols=218 Identities=10% Similarity=-0.013 Sum_probs=119.7
Q ss_pred CCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCccccccc
Q 022870 30 KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTN 109 (291)
Q Consensus 30 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 109 (291)
+..+..++.++.|..+|.. ++.......... .+.++...+ + ..++.++.++.|..+|.. ++... .......
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~--~~~~~~~~~--~-g~l~vgt~~~~l~~~d~~-g~~~~--~~~~~~~ 177 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKA--IYATPIVSE--D-GTIYVGSNDNYLYAINPD-GTEKW--RFKTNDA 177 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSC--CCSCCEECT--T-SCEEEECTTSEEEEECTT-SCEEE--EEECSSC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCc--eeeeeEEcC--C-CEEEEEcCCCEEEEECCC-CCEeE--EEecCCC
Confidence 3467778888999999988 777666654432 256666665 5 457778888999999988 54322 1111110
Q ss_pred eEEEEEeecccCccceeccCCCCceeeecccCccc-cccCCCCCC--cccCCCCCcEEEEecCCcCeEEEEeCCCcceee
Q 022870 110 SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETV-DTDSLCDSK--DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCT 186 (291)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~ 186 (291)
.. ............... .....++ ...... ......... +...++|. +++ ++.++.+..+|. +++.+.
T Consensus 178 ~~--~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v--~t~~~gl~~~~~-~g~~~~ 248 (330)
T 3hxj_A 178 IT--SAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYV--TSLDGHLYAINP-DGTEKW 248 (330)
T ss_dssp CC--SCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEE--EETTTEEEEECT-TSCEEE
T ss_pred ce--eeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEE--EcCCCeEEEECC-CCCEeE
Confidence 00 000011111111111 2233333 222111 111111111 66667764 443 333678888885 455555
Q ss_pred EecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCe
Q 022870 187 RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG 266 (291)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 266 (291)
.+.. .. .....+. +.++ + .|..++.+|.|..+|. + ++.+..+......+.++..++++.
T Consensus 249 ~~~~--------~~----~~~~~~~-~~~~---g--~l~v~t~~ggl~~~d~-~-g~~~~~~~~~~~~~~~~~~d~~g~- 307 (330)
T 3hxj_A 249 RFKT--------GK----RIESSPV-IGNT---D--TIYFGSYDGHLYAINP-D-GTEKWNFETGSWIIATPVIDENGT- 307 (330)
T ss_dssp EEEC--------SS----CCCSCCE-ECTT---S--CEEEECTTCEEEEECT-T-SCEEEEEECSSCCCSCCEECTTCC-
T ss_pred EeeC--------CC----Cccccce-EcCC---C--eEEEecCCCCEEEECC-C-CcEEEEEEcCCccccceEEcCCCE-
Confidence 5542 11 1111222 4433 3 5888888999999996 4 666666665566778888888887
Q ss_pred eEEecCCCeEEEEEcCCCce
Q 022870 267 GISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 267 l~s~s~dg~i~vw~~~~~~~ 286 (291)
|..++.+|.+++...+..+.
T Consensus 308 l~~gt~~G~~~~~~~~~~~~ 327 (330)
T 3hxj_A 308 IYFGTRNGKFYALFNLEHHH 327 (330)
T ss_dssp EEEECTTSCEEEEEC-----
T ss_pred EEEEcCCCeEEEEecccccc
Confidence 56678899999988766543
No 247
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.69 E-value=2.8e-06 Score=73.55 Aligned_cols=208 Identities=14% Similarity=0.093 Sum_probs=122.1
Q ss_pred CCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCc--------ce-EEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCC
Q 022870 30 KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAH--------GI-VSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSS 100 (291)
Q Consensus 30 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~--------~v-~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 100 (291)
+..++.++.++.|..+|..+|+.+..+....... .+ ..+.+ .+..++.++.|+.|..+|.++++...
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~v~v~~~dg~l~AlDa~TG~~~W 145 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV----WKGKVYVGVLDGRLEAIDAKTGQRAW 145 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE----ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE----ECCEEEEEccCCEEEEEECCCCCEee
Confidence 4577888889999999999999998876543210 00 11222 34788889999999999999997644
Q ss_pred CCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCC--CCCcEEEEecC----CcCeE
Q 022870 101 NPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPA--EGPKYMAVAGE----QLSEV 174 (291)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~----~d~~i 174 (291)
+ .... ...... +. +..+| .+..+++.++. .++.|
T Consensus 146 ~----~~~~--------~~~~~~------------~~----------------~~~sP~v~~g~v~vg~~~~~~~~~g~v 185 (689)
T 1yiq_A 146 S----VDTR--------ADHKRS------------YT----------------ITGAPRVVNGKVVIGNGGAEFGVRGYV 185 (689)
T ss_dssp E----EECC--------SCTTSC------------CB----------------CCSCCEEETTEEEECCBCTTTCCBCEE
T ss_pred e----ecCc--------CCCCCC------------cc----------------ccCCcEEECCEEEEEeCCCccCCCCEE
Confidence 1 1100 000000 00 00111 12234432221 36899
Q ss_pred EEEeCCCcceeeEecccccCCCCCCCCC------------------cceee-eeEEEecCCCCCCceEEEeecCCC----
Q 022870 175 EIWDLNTAERCTRLHQNSCGGSPNFSSK------------------GRGMC-MAVQAYLPSKSQGFVNVLAGYEDG---- 231 (291)
Q Consensus 175 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~-~~~~~~~p~~~~g~~~l~~g~~dg---- 231 (291)
+.||.++++.+..+......+....... ..+.. ..+. |.|.. . .++.++.++
T Consensus 186 ~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~-~d~~~---~-~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 186 TAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFA-YDPEL---N-LLYIGVGNGSLWD 260 (689)
T ss_dssp EEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEE-EETTT---T-EEEEECCCEESSC
T ss_pred EEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCcccccee-EcCCC---C-EEEEeCCCCCccc
Confidence 9999999998877652100000000000 00011 1343 77763 2 677777765
Q ss_pred ---------------cEEEEEccCCCCceeeccc--cc-------cceeEEEeecCCC---eeEEecCCCeEEEEEcCCC
Q 022870 232 ---------------SILVWDIRNPGIPLTAMKV--HL-------EPVLCLSIDESCN---GGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 232 ---------------~i~vwd~~~~~~~~~~~~~--h~-------~~v~~~~~~~~~~---~l~s~s~dg~i~vw~~~~~ 284 (291)
.|..+|.++ ++.+..++. |. .++.-.....+|+ .|+.++.+|.++++|.+++
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~T-G~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG 339 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADT-GEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATG 339 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTT-CCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred cCCCCCCCCCceeeeeEEEEEccC-CceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCC
Confidence 399999999 888776653 22 1111112223454 7889999999999999999
Q ss_pred cee
Q 022870 285 TVS 287 (291)
Q Consensus 285 ~~~ 287 (291)
+++
T Consensus 340 ~~l 342 (689)
T 1yiq_A 340 ELL 342 (689)
T ss_dssp CEE
T ss_pred CEe
Confidence 987
No 248
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.68 E-value=3e-07 Score=72.12 Aligned_cols=232 Identities=9% Similarity=0.006 Sum_probs=120.4
Q ss_pred CceEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeE
Q 022870 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i 88 (291)
+++.++..+.....+.....++ .+..++.++.|..|| .+++.+....... ..+.++...+ + ..++.++.+ |
T Consensus 10 ~~~W~~~~~~~~~~~~~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~--~~~~~~~~~~--~-g~l~v~t~~--l 80 (330)
T 3hxj_A 10 KIKWEFLIGNSIDSSPILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGE--IIECRPSIGK--D-GTIYFGSDK--V 80 (330)
T ss_dssp --CCTTTSCEEECCCCEECTTS-CEECSSTTTTTEEEC-TTSCEEESSCGGG--EEEECCEETT--T-TEECCSSCE--E
T ss_pred eEEEEEeCCCCcccCceEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEecCC--CcccceEEec--C-CcEEEecCc--E
Confidence 4444444444434455565566 577778888999999 8888766554433 2356666665 5 456666655 8
Q ss_pred EEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccc-cCCCCC--CcccCCCCCcEEE
Q 022870 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT-DSLCDS--KDDVPAEGPKYMA 165 (291)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~ 165 (291)
..+|. +++... ............... ...............++.. ...... ...... .+...+++. +++
T Consensus 81 ~~~d~-~g~~~~----~~~~~~~~~~~~~~~-~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~v 152 (330)
T 3hxj_A 81 YAINP-DGTEKW----RFDTKKAIVSDFTIF-EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYV 152 (330)
T ss_dssp EEECC-CGGGGG----GSCC-----CCEEEE-TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEE
T ss_pred EEECC-CCcEEE----EEECCCCcccCceEE-CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEE
Confidence 88886 443322 111111000000011 1111122222223333333 221111 111111 145555664 443
Q ss_pred EecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCce
Q 022870 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 245 (291)
Q Consensus 166 ~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~ 245 (291)
++.++.+..||.. ++....+.. . ...+.++. ..++ | .+..++ +.|..+| .+ ++..
T Consensus 153 --gt~~~~l~~~d~~-g~~~~~~~~--------~----~~~~~~~~-~d~~---g--~l~v~t--~~l~~~d-~~-g~~~ 207 (330)
T 3hxj_A 153 --GSNDNYLYAINPD-GTEKWRFKT--------N----DAITSAAS-IGKD---G--TIYFGS--DKVYAIN-PD-GTEK 207 (330)
T ss_dssp --ECTTSEEEEECTT-SCEEEEEEC--------S----SCCCSCCE-ECTT---C--CEEEES--SSEEEEC-TT-SCEE
T ss_pred --EcCCCEEEEECCC-CCEeEEEec--------C----CCceeeeE-EcCC---C--EEEEEe--CEEEEEC-CC-CcEE
Confidence 4456899999998 776665552 1 11222232 4433 4 355555 7889999 55 6666
Q ss_pred eeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCC
Q 022870 246 TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (291)
Q Consensus 246 ~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~ 283 (291)
.........+.++..++++. |..++.++.|..++.+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g 244 (330)
T 3hxj_A 208 WNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDG 244 (330)
T ss_dssp EEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTS
T ss_pred EEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCC
Confidence 66655556788888888876 44455677777777533
No 249
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.63 E-value=4.2e-06 Score=65.01 Aligned_cols=157 Identities=12% Similarity=0.000 Sum_probs=94.0
Q ss_pred ceEEEEEeecCCCC-eEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCc
Q 022870 64 GIVSVATGPSIGLN-KVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (291)
Q Consensus 64 ~v~~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (291)
......|+| +++ ++++...++.|..|+.. ++.. .+.........
T Consensus 46 ~~egp~~~~--~g~~l~~~d~~~~~i~~~~~~-g~~~---~~~~~~~~~~g----------------------------- 90 (305)
T 3dr2_A 46 WSEGPAWWE--AQRTLVWSDLVGRRVLGWRED-GTVD---VLLDATAFTNG----------------------------- 90 (305)
T ss_dssp SEEEEEEEG--GGTEEEEEETTTTEEEEEETT-SCEE---EEEESCSCEEE-----------------------------
T ss_pred CccCCeEeC--CCCEEEEEECCCCEEEEEeCC-CCEE---EEeCCCCccce-----------------------------
Confidence 378899999 887 56677788999999873 3211 11111100000
Q ss_pred cccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCce
Q 022870 143 TVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFV 222 (291)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~ 222 (291)
++++++|+ +++ +...++.|.+||.. ++. ..+.. .........+..+. +.|+ |.
T Consensus 91 -----------l~~d~dG~-l~v-~~~~~~~v~~~~~~-g~~-~~~~~-------~~~~~~~~~~~~i~-~d~d---G~- 143 (305)
T 3dr2_A 91 -----------NAVDAQQR-LVH-CEHGRRAITRSDAD-GQA-HLLVG-------RYAGKRLNSPNDLI-VARD---GA- 143 (305)
T ss_dssp -----------EEECTTSC-EEE-EETTTTEEEEECTT-SCE-EEEEC-------EETTEECSCCCCEE-ECTT---SC-
T ss_pred -----------eeECCCCC-EEE-EECCCCEEEEECCC-CCE-EEEEe-------ccCCCccCCCCCEE-ECCC---CC-
Confidence 55888886 444 34445789999986 543 22221 00010112234565 8887 54
Q ss_pred EEEe----ecC-------------CCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCC------CeEEEE
Q 022870 223 NVLA----GYE-------------DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD------QKIVLY 279 (291)
Q Consensus 223 ~l~~----g~~-------------dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d------g~i~vw 279 (291)
++++ |.. .+.|+.||..+ ++..... .....+.++|+|+++.|+.+... +.|.+|
T Consensus 144 l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~-g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~ 220 (305)
T 3dr2_A 144 IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG-SPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAF 220 (305)
T ss_dssp EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS-CCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEE
T ss_pred EEEeCcCCCccccccccccccccCCCeEEEEcCCC-CcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEE
Confidence 5554 432 35688888765 4433322 34567899999999977666554 789999
Q ss_pred EcCCCc
Q 022870 280 NLDHST 285 (291)
Q Consensus 280 ~~~~~~ 285 (291)
++..+.
T Consensus 221 ~~~~~~ 226 (305)
T 3dr2_A 221 AWRDGA 226 (305)
T ss_dssp EEETTE
T ss_pred EecCCC
Confidence 987654
No 250
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.62 E-value=9.7e-05 Score=59.33 Aligned_cols=208 Identities=6% Similarity=-0.089 Sum_probs=119.9
Q ss_pred cceeEEEEcCC-CCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeE-EEEeCCCeEEEEECCCC
Q 022870 19 ASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDGTVKCWDIENG 96 (291)
Q Consensus 19 ~~v~~l~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~ 96 (291)
.....++|++. +.++++-...+.|..+++..+.....+.... .....+++.+ .+..| ++-...+.|.+.++...
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~--~~p~glavd~--~~g~lY~~d~~~~~I~~~~~dg~ 191 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGL--ESPGGLAVDW--VHDKLYWTDSGTSRIEVANLDGA 191 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSC--SCCCCEEEET--TTTEEEEEETTTTEEEECBTTSC
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCC--CCccEEEEEe--CCCeEEEEcCCCCeEEEEeCCCC
Confidence 34678999974 4455566677899999987655433332222 2256788886 44444 45555678888887643
Q ss_pred CCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEE
Q 022870 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEI 176 (291)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~ 176 (291)
.... +.......... ++++|.+..++.+-....+.|..
T Consensus 192 ~~~~--l~~~~l~~P~g----------------------------------------iavdp~~g~ly~td~~~~~~I~r 229 (386)
T 3v65_B 192 HRKV--LLWQSLEKPRA----------------------------------------IALHPMEGTIYWTDWGNTPRIEA 229 (386)
T ss_dssp SCEE--EECSSCSCEEE----------------------------------------EEEETTTTEEEEEECSSSCEEEE
T ss_pred ceEE--eecCCCCCCcE----------------------------------------EEEEcCCCeEEEeccCCCCEEEE
Confidence 2110 00000000000 55777777666543332278999
Q ss_pred EeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeecccccccee
Q 022870 177 WDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVL 256 (291)
Q Consensus 177 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~ 256 (291)
+++........... + ......++ ++|++ ++ +.++-...+.|..+|+.. ......+........
T Consensus 230 ~~~dG~~~~~~~~~-------~-----~~~PnGla-vd~~~--~~-lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~ 292 (386)
T 3v65_B 230 SSMDGSGRRIIADT-------H-----LFWPNGLT-IDYAG--RR-MYWVDAKHHVIERANLDG-SHRKAVISQGLPHPF 292 (386)
T ss_dssp EETTSCSCEEEECS-------S-----CSCEEEEE-EEGGG--TE-EEEEETTTTEEEEECTTS-CSCEEEECSSCSSEE
T ss_pred EeCCCCCcEEEEEC-------C-----CCCeeeEE-EeCCC--CE-EEEEECCCCEEEEEeCCC-CeeEEEEECCCCCce
Confidence 98875433322221 1 12345665 88762 33 555666778999999874 332223333344668
Q ss_pred EEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 257 CLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 257 ~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+|+++. +.++++-...+.|..++..+++..+.+
T Consensus 293 giav~~-~~ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 293 AITVFE-DSLYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp EEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEEEC-CEEEEeeCCCCeEEEEECCCCcceEEE
Confidence 888854 455666667888999986666655443
No 251
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.61 E-value=9.1e-05 Score=57.44 Aligned_cols=230 Identities=7% Similarity=-0.025 Sum_probs=119.6
Q ss_pred eEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC-C-eE
Q 022870 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD-G-TV 88 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-g-~i 88 (291)
+..+... .....++|+++++++++-..++.|..||... +....+... .....+++.+ +++++++.... + .|
T Consensus 25 ~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~---~~p~gia~~~--dG~l~vad~~~~~~~v 97 (306)
T 2p4o_A 25 ITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVE---GKVSGLAFTS--NGDLVATGWNADSIPV 97 (306)
T ss_dssp EEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECS---SEEEEEEECT--TSCEEEEEECTTSCEE
T ss_pred eEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCC---CCceeEEEcC--CCcEEEEeccCCcceE
Confidence 3444322 4578899999998777777889999999764 443333322 3488999999 87765554332 2 46
Q ss_pred EEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCc----cc--cc-----cCCCC-CC-cc
Q 022870 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE----TV--DT-----DSLCD-SK-DD 155 (291)
Q Consensus 89 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~-----~~~~~-~~-~~ 155 (291)
..+|..+++... ........... .......... .........++.++... .. .. ..... .. -.
T Consensus 98 ~~~d~~~g~~~~--~~~~~~~~~~~-g~~~~~~~~~-~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~png 173 (306)
T 2p4o_A 98 VSLVKSDGTVET--LLTLPDAIFLN-GITPLSDTQY-LTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANG 173 (306)
T ss_dssp EEEECTTSCEEE--EEECTTCSCEE-EEEESSSSEE-EEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEE
T ss_pred EEEcCCCCeEEE--EEeCCCccccC-cccccCCCcE-EEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCC
Confidence 667766665321 11111111000 0000011111 11111122333333211 10 00 00011 11 12
Q ss_pred cCCCCCcEEEEecCCcCeEEEEeCCC-cce--eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCc
Q 022870 156 VPAEGPKYMAVAGEQLSEVEIWDLNT-AER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGS 232 (291)
Q Consensus 156 ~~~~~~~~~~~~g~~d~~i~~wd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~ 232 (291)
++|++..+++ +-...+.|..||+.. ++. ...+.. . .....++ +.++ |. ++++....+.
T Consensus 174 is~dg~~lyv-~d~~~~~I~~~~~~~~g~~~~~~~~~~--------~-----~~P~gi~-vd~d---G~-l~va~~~~~~ 234 (306)
T 2p4o_A 174 LKRFGNFLYV-SNTEKMLLLRIPVDSTDKPGEPEIFVE--------Q-----TNIDDFA-FDVE---GN-LYGATHIYNS 234 (306)
T ss_dssp EEEETTEEEE-EETTTTEEEEEEBCTTSCBCCCEEEEE--------S-----CCCSSEE-EBTT---CC-EEEECBTTCC
T ss_pred cCcCCCEEEE-EeCCCCEEEEEEeCCCCCCCccEEEec--------c-----CCCCCeE-ECCC---CC-EEEEeCCCCe
Confidence 3788876665 455578999999874 321 111110 0 1123343 7776 54 6666667789
Q ss_pred EEEEEccCCCCc--eeeccccccceeEEEee---cCCCeeEEecC
Q 022870 233 ILVWDIRNPGIP--LTAMKVHLEPVLCLSID---ESCNGGISGGA 272 (291)
Q Consensus 233 i~vwd~~~~~~~--~~~~~~h~~~v~~~~~~---~~~~~l~s~s~ 272 (291)
|.++|.. ++. +..+......+++++|. +++..|+..+.
T Consensus 235 V~~~~~~--G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 235 VVRIAPD--RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEEECTT--CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEEECCC--CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 9999975 444 22344334568999998 78766654443
No 252
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.60 E-value=4.4e-06 Score=73.15 Aligned_cols=198 Identities=11% Similarity=0.023 Sum_probs=106.6
Q ss_pred ceeEEEEc-CCCCEEEEecC-----CCeEEEEeCCCC-eEEEE-EeeecCCcceEEEEEeecCCCCeEEEEeCC-----C
Q 022870 20 SVTDVCFH-QTKPILFAGTT-----GGELRIWDTVQH-RTVSS-SWVHSAAHGIVSVATGPSIGLNKVISQGRD-----G 86 (291)
Q Consensus 20 ~v~~l~~~-~~~~~l~s~~~-----dg~v~iwd~~~~-~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-----g 86 (291)
.+...+|| |||++||-+.. ..+|+++|+.++ +.+.. +. .....++|+| |++.|+....| .
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~-----~~~~~~~Wsp--Dg~~l~y~~~d~~~~~~ 247 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS-----GTNGEIVWGP--DHTSLFYVTKDETLREN 247 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE-----EECSCCEECS--STTEEEEEEECTTCCEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc-----CceeeEEEec--CCCEEEEEEECCCCCCC
Confidence 67889999 99998874422 236999999988 63211 11 1134688999 98887766654 2
Q ss_pred eEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEE
Q 022870 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAV 166 (291)
Q Consensus 87 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (291)
.|.++++.++......++.......... +.|+|||+.+++.
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~---------------------------------------~~~SpDg~~l~~~ 288 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSAF---------------------------------------MYKAADTNTLCIG 288 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEEE---------------------------------------EEECTTSSEEEEE
T ss_pred EEEEEECCCCchhcEEEEecCCCceEEE---------------------------------------EEECCCCCEEEEE
Confidence 5777777665321100110000000000 4599999988775
Q ss_pred ecC-CcCeEEEEeCCCcc-ee--eEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCC----CcEEEEEc
Q 022870 167 AGE-QLSEVEIWDLNTAE-RC--TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED----GSILVWDI 238 (291)
Q Consensus 167 ~g~-~d~~i~~wd~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d----g~i~vwd~ 238 (291)
+.. ....|.++|+.++. .. ..+.. .. ....+++. |+.. +. +++....+ ..|..+|+
T Consensus 289 ~~~~~~~~l~~~d~~~~~~~~~~~~l~~-------~~----~~~~~s~~-~~~g---~~-l~~~t~~~~a~~~~L~~~d~ 352 (751)
T 2xe4_A 289 SQSPETAEVHLLDLRKGNAHNTLEIVRP-------RE----KGVRYDVQ-MHGT---SH-LVILTNEGGAVNHKLLIAPR 352 (751)
T ss_dssp EECSSCEEEEEEESSSCTTCCCEEESSC-------CC----TTCCEEEE-EETT---TE-EEEEECTTTCTTCEEEEEET
T ss_pred ecCCCCceEEEEECCCCCCCceeEEeec-------CC----CCceEEEe-eeeC---CE-EEEEeCCCCCCCcEEEEEcC
Confidence 533 24568889998752 22 33321 11 12222232 3322 33 44444433 46777777
Q ss_pred cCCCCceee-cccccc--ceeEEEeecCCCeeEEecCCCeE--EEEEc
Q 022870 239 RNPGIPLTA-MKVHLE--PVLCLSIDESCNGGISGGADQKI--VLYNL 281 (291)
Q Consensus 239 ~~~~~~~~~-~~~h~~--~v~~~~~~~~~~~l~s~s~dg~i--~vw~~ 281 (291)
.++ ..... +..|.. .+.++.+.. +.++++...++.. .++++
T Consensus 353 ~~~-~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 353 GQP-SDWSHVLVDHSEDVFMESIAVRS-NYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TST-TCCCCEEECCCSSEEEEEEEECS-SEEEEEEEETTEEEEEEEEC
T ss_pred CCc-ccceeeEECCCCCcEEEEEEEEC-CEEEEEEEeCCEEEEEEEec
Confidence 642 22222 333333 455666653 3455677777764 45554
No 253
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.50 E-value=0.00016 Score=54.78 Aligned_cols=189 Identities=11% Similarity=0.035 Sum_probs=107.2
Q ss_pred CEEEEecCCCeEEEEeCCCCeE-----EEEEeeecCCcceEEEEEeecCCCCeEE-EEeCCCeEEEEECCCCCCCCCCcc
Q 022870 31 PILFAGTTGGELRIWDTVQHRT-----VSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLSSNPSL 104 (291)
Q Consensus 31 ~~l~s~~~dg~v~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~ 104 (291)
.+|+.+.. +.|+.++++.... ...+.... .....++|++ +++.|+ +-..++.|..++........ ..
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~--~~~~gi~~d~--~~~~ly~~d~~~~~I~~~~~~g~~~~~--~~ 74 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPA--KVIIGLAFDC--VDKVVYWTDISEPSIGRASLHGGEPTT--II 74 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEE--EEEEEEEEET--TTTEEEEEETTTTEEEEEESSSCCCEE--EE
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCC--CcEEEEEEec--CCCEEEEEECCCCEEEEEecCCCCcEE--EE
Confidence 34555443 4788888765432 11222222 2378999998 656555 44457899999987653210 00
Q ss_pred ccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcce
Q 022870 105 TIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAER 184 (291)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~ 184 (291)
......... +++++++..++++ ....+.|.++|+.....
T Consensus 75 ~~~~~~p~~----------------------------------------ia~d~~~~~lyv~-d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 75 RQDLGSPEG----------------------------------------IALDHLGRTIFWT-DSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp CTTCCCEEE----------------------------------------EEEETTTTEEEEE-ETTTTEEEEEETTSCSC
T ss_pred ECCCCCccE----------------------------------------EEEEecCCeEEEE-ECCCCEEEEEEcCCCCE
Confidence 000000000 5678877666654 44468899999875432
Q ss_pred eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecC--CCcEEEEEccCCCCceeecc-ccccceeEEEee
Q 022870 185 CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE--DGSILVWDIRNPGIPLTAMK-VHLEPVLCLSID 261 (291)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~--dg~i~vwd~~~~~~~~~~~~-~h~~~v~~~~~~ 261 (291)
...... + ......++ +.|++ +. ++++... .+.|..+++.. .....+. ........++++
T Consensus 114 ~~~~~~-------~-----~~~P~~i~-vd~~~--g~-lyv~~~~~~~~~I~~~~~dg--~~~~~~~~~~~~~P~gia~d 175 (267)
T 1npe_A 114 RVLFDT-------G-----LVNPRGIV-TDPVR--GN-LYWTDWNRDNPKIETSHMDG--TNRRILAQDNLGLPNGLTFD 175 (267)
T ss_dssp EEEECS-------S-----CSSEEEEE-EETTT--TE-EEEEECCSSSCEEEEEETTS--CCCEEEECTTCSCEEEEEEE
T ss_pred EEEEEC-------C-----CCCccEEE-EeeCC--CE-EEEEECCCCCcEEEEEecCC--CCcEEEEECCCCCCcEEEEc
Confidence 222221 1 12245565 88862 43 3333333 47899998863 2222221 223467899999
Q ss_pred cCCCee-EEecCCCeEEEEEcCCCc
Q 022870 262 ESCNGG-ISGGADQKIVLYNLDHST 285 (291)
Q Consensus 262 ~~~~~l-~s~s~dg~i~vw~~~~~~ 285 (291)
+++..| ++-...+.|.+++++...
T Consensus 176 ~~~~~lyv~d~~~~~I~~~~~~g~~ 200 (267)
T 1npe_A 176 AFSSQLCWVDAGTHRAECLNPAQPG 200 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEETTEEE
T ss_pred CCCCEEEEEECCCCEEEEEecCCCc
Confidence 976544 566667899999997643
No 254
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.48 E-value=5.4e-05 Score=65.37 Aligned_cols=76 Identities=14% Similarity=0.174 Sum_probs=55.6
Q ss_pred eEEEEcCCCCEEEEecCCCe-------------------EEEEeCCCCeEEEEEeeecCC-------cceEEEEEeecCC
Q 022870 22 TDVCFHQTKPILFAGTTGGE-------------------LRIWDTVQHRTVSSSWVHSAA-------HGIVSVATGPSIG 75 (291)
Q Consensus 22 ~~l~~~~~~~~l~s~~~dg~-------------------v~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~ 75 (291)
..+++.|+..+++.++.++. |..+|..+|+.+..++...+. .+.....+.. +
T Consensus 233 ~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~--~ 310 (668)
T 1kv9_A 233 DSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI--D 310 (668)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE--T
T ss_pred cceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEecc--C
Confidence 35788887778888887764 999999999998887653211 1233333334 5
Q ss_pred CC---eEEEEeCCCeEEEEECCCCCCC
Q 022870 76 LN---KVISQGRDGTVKCWDIENGGLS 99 (291)
Q Consensus 76 ~~---~l~s~~~dg~i~iwd~~~~~~~ 99 (291)
|. .++.++.+|.+.++|.++++.+
T Consensus 311 G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 311 GKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred CcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 44 6889999999999999999764
No 255
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.47 E-value=2.2e-05 Score=67.79 Aligned_cols=207 Identities=14% Similarity=0.078 Sum_probs=121.0
Q ss_pred CCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCc--------ce-EEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCC
Q 022870 30 KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAH--------GI-VSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSS 100 (291)
Q Consensus 30 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~--------~v-~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 100 (291)
+..++.++.++.|..+|..+|+.+..+....... .+ ..+++ .+..++.++.|+.|..+|.++++...
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~v~~~dg~l~alD~~tG~~~W 141 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL----WGDKVYVGTLDGRLIALDAKTGKAIW 141 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE----EBTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE----ECCEEEEEcCCCEEEEEECCCCCEee
Confidence 4477778889999999999999998876432210 00 11222 23678888999999999999997654
Q ss_pred CCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCC--CCCcEEEEecC----CcCeE
Q 022870 101 NPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPA--EGPKYMAVAGE----QLSEV 174 (291)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~----~d~~i 174 (291)
+ ........ ... +.-+| .+..+++.++. .++.|
T Consensus 142 ~--~~~~~~~~---~~~------------------------------------~~~~P~v~~~~v~vg~~~~~~~~~g~v 180 (668)
T 1kv9_A 142 S--QQTTDPAK---PYS------------------------------------ITGAPRVVKGKVIIGNGGAEYGVRGFV 180 (668)
T ss_dssp E--EECSCTTS---SCB------------------------------------CCSCCEEETTEEEECCBCTTTCCBCEE
T ss_pred e--eccCCCCC---cce------------------------------------ecCCCEEECCEEEEeCCCCCcCCCCEE
Confidence 1 11100000 000 00011 12334432221 25899
Q ss_pred EEEeCCCcceeeEecccccCCCCCCCCC------------------cceee-eeEEEecCCCCCCceEEEeecCCC----
Q 022870 175 EIWDLNTAERCTRLHQNSCGGSPNFSSK------------------GRGMC-MAVQAYLPSKSQGFVNVLAGYEDG---- 231 (291)
Q Consensus 175 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~-~~~~~~~p~~~~g~~~l~~g~~dg---- 231 (291)
..+|.++++.+..+......+....... ..+.+ ..+. +.|.. + .++.++.++
T Consensus 181 ~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a-~d~~~--~--~vy~~~~~g~~w~ 255 (668)
T 1kv9_A 181 SAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMA-YDPEL--D--LLYVGTGNGSPWN 255 (668)
T ss_dssp EEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEE-EETTT--T--EEEEECCCEESSC
T ss_pred EEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceE-EcCCC--C--EEEEeCCCCCccc
Confidence 9999999999887753110000000000 00111 1233 77652 2 677776665
Q ss_pred ---------------cEEEEEccCCCCceeeccc--cc-------cceeEEEeecCCC---eeEEecCCCeEEEEEcCCC
Q 022870 232 ---------------SILVWDIRNPGIPLTAMKV--HL-------EPVLCLSIDESCN---GGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 232 ---------------~i~vwd~~~~~~~~~~~~~--h~-------~~v~~~~~~~~~~---~l~s~s~dg~i~vw~~~~~ 284 (291)
.|..+|.++ ++.+..++. |. .++.-..+..+|+ .|+.++.+|.++++|.+++
T Consensus 256 ~~~~~~~~gd~l~~~~v~AlD~~t-G~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG 334 (668)
T 1kv9_A 256 REVRSPGGGDNLYLSSILAIRPDT-GKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNG 334 (668)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTT-CCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred cCCCCCCCCCceeeeeEEEEcCCC-CceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCC
Confidence 499999998 887776653 22 2222222233554 6889999999999999999
Q ss_pred cee
Q 022870 285 TVS 287 (291)
Q Consensus 285 ~~~ 287 (291)
+++
T Consensus 335 ~~l 337 (668)
T 1kv9_A 335 KLI 337 (668)
T ss_dssp CEE
T ss_pred CEe
Confidence 987
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.47 E-value=2.5e-05 Score=66.11 Aligned_cols=59 Identities=10% Similarity=-0.077 Sum_probs=42.3
Q ss_pred CCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 229 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 229 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
.+|.|..||+.+ ++.+.++... ..+.+......+..++.++.||.|+.||.++++++-.
T Consensus 442 ~~g~l~a~D~~t-G~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~ 500 (571)
T 2ad6_A 442 EMGQIRAFDLTT-GKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWN 500 (571)
T ss_dssp CCEEEEEECTTT-CCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCCeEEEEECCC-CCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEE
Confidence 458899999998 7777766532 3333333333344677789999999999999998754
No 257
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.43 E-value=0.00034 Score=55.32 Aligned_cols=244 Identities=5% Similarity=-0.119 Sum_probs=126.3
Q ss_pred cceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEE-EEeCCCeEEEEECCCCC
Q 022870 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGG 97 (291)
Q Consensus 19 ~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~ 97 (291)
+..+|.+..+++ +|+.+. ...|+..++........+... .....++|.+ ....|+ +-...+.|..+++....
T Consensus 34 d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~~~---~~~~~l~~d~--~~~~ly~~D~~~~~I~r~~~~g~~ 106 (349)
T 3v64_C 34 DRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNNL---ENAIALDFHH--RRELVFWSDVTLDRILRANLNGSN 106 (349)
T ss_dssp TSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEECSC---SCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCcccccccCc-eeEeec-ccceEEEeCCCCeeEEeecCC---CceEEEEEec--cccEEEEEeccCCceEEEecCCCC
Confidence 445666666654 444333 345888888765544433322 3378999997 545555 54567889999988654
Q ss_pred CCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCC-CCC--cccCCCCCcEEEEecCCcCeE
Q 022870 98 LSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC-DSK--DDVPAEGPKYMAVAGEQLSEV 174 (291)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~g~~d~~i 174 (291)
... +............+..........-.....+...+.+........... ... ++++|.+..++.+-....+.|
T Consensus 107 ~~~--~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I 184 (349)
T 3v64_C 107 VEE--VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRI 184 (349)
T ss_dssp CEE--EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred ceE--EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEE
Confidence 211 111111111111222111111111111222233333222111110011 111 888987777666433322789
Q ss_pred EEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccc
Q 022870 175 EIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEP 254 (291)
Q Consensus 175 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~ 254 (291)
..+++..... ..+.. . .......++ ++|++ ++ +.++-...+.|..+|+.. ......+......
T Consensus 185 ~r~~~dG~~~-~~~~~-------~----~~~~PnGla-~d~~~--~~-lY~aD~~~~~I~~~~~dG-~~~~~~~~~~~~~ 247 (349)
T 3v64_C 185 EASSMDGSGR-RIIAD-------T----HLFWPNGLT-IDYAG--RR-MYWVDAKHHVIERANLDG-SHRKAVISQGLPH 247 (349)
T ss_dssp EEEETTSCSC-EESCC-------S----SCSCEEEEE-EETTT--TE-EEEEETTTTEEEEEETTS-CSCEEEECSSCSS
T ss_pred EEEeCCCCCc-EEEEE-------C----CCCCcceEE-EeCCC--CE-EEEEECCCCEEEEEeCCC-CceEEEEeCCCCC
Confidence 8888875432 22211 0 122345665 88862 43 555666678999999874 3222223333456
Q ss_pred eeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 255 VLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 255 v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
..+|++.. +.++++-...+.|...+..+++....
T Consensus 248 P~giav~~-~~ly~td~~~~~V~~~~~~~G~~~~~ 281 (349)
T 3v64_C 248 PFAITVFE-DSLYWTDWHTKSINSANKFTGKNQEI 281 (349)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred ceEEEEEC-CEEEEecCCCCeEEEEEccCCCccEE
Confidence 67888854 45566666778898888666655443
No 258
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.39 E-value=0.00033 Score=54.61 Aligned_cols=199 Identities=14% Similarity=0.200 Sum_probs=109.0
Q ss_pred CCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecC--CCC---eEEEEeC---CCeEEEEECC--CCCCC
Q 022870 30 KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSI--GLN---KVISQGR---DGTVKCWDIE--NGGLS 99 (291)
Q Consensus 30 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~---~l~s~~~---dg~i~iwd~~--~~~~~ 99 (291)
..+++....++-+.+||+ +|+.+..+.. . .+..+..-|.. .|. ++++... +++|.+|++. +..+
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g--~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l- 113 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--G--KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL- 113 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--S--CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE-
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--C--CcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce-
Confidence 345665566788999999 7888888753 2 26666665510 112 2333333 5799999774 3221
Q ss_pred CCCccccccc--eEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCccc--CCCCCcEEEEecCCcCeEE
Q 022870 100 SNPSLTIKTN--SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDV--PAEGPKYMAVAGEQLSEVE 175 (291)
Q Consensus 100 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~d~~i~ 175 (291)
..+... +.... ...+. .+++ +|....+.+.....+|.+.
T Consensus 114 ----~~i~~~~~pv~t~----~~~py-----------------------------Glcly~~~~~g~~yafV~~k~G~~~ 156 (355)
T 3amr_A 114 ----QSMTDPDHPIATA----INEVY-----------------------------GFTLYHSQKTGKYYAMVTGKEGEFE 156 (355)
T ss_dssp ----EECSCTTSCEECC----CSSCC-----------------------------CEEEEECTTTCCEEEEEECSSSEEE
T ss_pred ----eeccccccCcCCC----CCCee-----------------------------EEEEEecCCCCcEEEEEECCCCeEE
Confidence 111000 00000 00000 0445 5644433222445579999
Q ss_pred EEeCC-------CcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCC----CCc
Q 022870 176 IWDLN-------TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP----GIP 244 (291)
Q Consensus 176 ~wd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~----~~~ 244 (291)
.|++. +.+.++++.. + +.+-.+. ..+.. + .|+.+-++.-|..+|.+-. .+.
T Consensus 157 q~~l~~~~~g~~~~~lVR~f~l-------g------sq~Egcv-vDd~~--g--~Lyv~eEd~GIw~~da~p~~~~~~~~ 218 (355)
T 3amr_A 157 QYELKADKNGYISGKKVRAFKM-------N------SQTEGMA-ADDEY--G--RLYIAEEDEAIWKFSAEPDGGSNGTV 218 (355)
T ss_dssp EEEEEECTTSCEEEEEEEEEEC-------S------SCEEEEE-EETTT--T--EEEEEETTTEEEEEECSTTSCSCCEE
T ss_pred EEEEEeCCCCcccceEEEEecC-------C------CCcceEE-EcCCC--C--eEEEecccceEEEEeCCcCCCCCceE
Confidence 99883 3355666663 1 1222333 66542 3 7999999877777775521 234
Q ss_pred eeecc-cc-ccceeEEEe--ecCCC-eeEEec-CCCeEEEEEcC-CCceeee
Q 022870 245 LTAMK-VH-LEPVLCLSI--DESCN-GGISGG-ADQKIVLYNLD-HSTVSHC 289 (291)
Q Consensus 245 ~~~~~-~h-~~~v~~~~~--~~~~~-~l~s~s-~dg~i~vw~~~-~~~~~~~ 289 (291)
+..+. ++ ...+..|++ .++++ +|++++ .++++.+||.+ +.+.+-.
T Consensus 219 v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~ 270 (355)
T 3amr_A 219 IDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVAD 270 (355)
T ss_dssp EEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEE
T ss_pred EEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEE
Confidence 44432 22 246888888 45544 555544 67899999997 5555543
No 259
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.29 E-value=0.00017 Score=61.19 Aligned_cols=59 Identities=12% Similarity=-0.060 Sum_probs=40.8
Q ss_pred CCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 229 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 229 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
.+|.|..||+.+ ++.+.+... ..++.+-.....+.+++.++.||.++.||.++++++-+
T Consensus 451 ~~G~l~A~D~~t-G~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~ 509 (599)
T 1w6s_A 451 GLGQIKAYNAIT-GDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWK 509 (599)
T ss_dssp CCEEEEEECTTT-CCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CcCeEEEEECCC-CCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEE
Confidence 458899999998 777766642 22222211222444677789999999999999998754
No 260
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.24 E-value=0.0009 Score=52.14 Aligned_cols=207 Identities=7% Similarity=-0.088 Sum_probs=119.2
Q ss_pred cceeEEEEcC-CCCEEEEecCCCeEEEEeCCCCeEE-EEEeeecCCcceEEEEEeecCCCC-eEEEEeCCCeEEEEECCC
Q 022870 19 ASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTV-SSSWVHSAAHGIVSVATGPSIGLN-KVISQGRDGTVKCWDIEN 95 (291)
Q Consensus 19 ~~v~~l~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~ 95 (291)
..+..++|++ ++.++.+-...+.|..+++..+... ..+.... .....+++.+ .+. ++++-...+.|.+++++.
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l--~~p~glavd~--~~g~ly~~d~~~~~I~~~~~dG 110 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL--LSPDGLACDW--LGEKLYWTDSETNRIEVSNLDG 110 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECC--SCCCEEEEET--TTTEEEEEETTTTEEEEEETTS
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCC--CCccEEEEEc--CCCeEEEEECCCCEEEEEECCC
Confidence 3466889998 4555566677789999998765321 1222221 2256788886 444 445555678899999875
Q ss_pred CCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEE
Q 022870 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVE 175 (291)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~ 175 (291)
..... +.......... ++++|.+..++.+-....+.|.
T Consensus 111 ~~~~~--l~~~~~~~P~g----------------------------------------iavdp~~g~ly~td~~~~~~I~ 148 (318)
T 3sov_A 111 SLRKV--LFWQELDQPRA----------------------------------------IALDPSSGFMYWTDWGEVPKIE 148 (318)
T ss_dssp CSCEE--EECSSCSSEEE----------------------------------------EEEEGGGTEEEEEECSSSCEEE
T ss_pred CcEEE--EEeCCCCCccE----------------------------------------EEEeCCCCEEEEEecCCCCEEE
Confidence 42110 00000000000 5566766666654322357888
Q ss_pred EEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccce
Q 022870 176 IWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV 255 (291)
Q Consensus 176 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v 255 (291)
..++........... + -.....++ ++|++ ++ +.++=+..+.|..+|+.. ........+.....
T Consensus 149 r~~~dG~~~~~~~~~-------~-----l~~Pngla-vd~~~--~~-lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P 211 (318)
T 3sov_A 149 RAGMDGSSRFIIINS-------E-----IYWPNGLT-LDYEE--QK-LYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHP 211 (318)
T ss_dssp EEETTSCSCEEEECS-------S-----CSCEEEEE-EETTT--TE-EEEEETTTTEEEEEETTS-CSCEEEECSCCSCE
T ss_pred EEEcCCCCeEEEEEC-------C-----CCCccEEE-EeccC--CE-EEEEECCCCEEEEEcCCC-CceEEEecCCCCCc
Confidence 888864332222221 1 12345665 88862 33 555666788999999874 22222223234566
Q ss_pred eEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 256 LCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 256 ~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
.+++++.+ .++++-...+.|..++..+++....
T Consensus 212 ~glav~~~-~lywtd~~~~~V~~~~~~~G~~~~~ 244 (318)
T 3sov_A 212 FALTLFED-ILYWTDWSTHSILACNKYTGEGLRE 244 (318)
T ss_dssp EEEEEETT-EEEEEETTTTEEEEEETTTCCSCEE
T ss_pred eEEEEeCC-EEEEEecCCCeEEEEECCCCCceEE
Confidence 78888755 4556666778999999987776544
No 261
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.21 E-value=0.00016 Score=61.39 Aligned_cols=59 Identities=19% Similarity=0.154 Sum_probs=41.8
Q ss_pred CCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 229 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 229 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
.+|.|..||+.+ ++.+.+..... ++.+-.....+.+++.++.||.++.||.++++++-.
T Consensus 464 ~~G~l~A~D~~t-G~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~ 522 (582)
T 1flg_A 464 HVGSLRAMDPVS-GKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWK 522 (582)
T ss_dssp CSEEEEEECTTT-CCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CcceEEEEECCC-CCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEE
Confidence 368899999998 77776665432 222222222345677899999999999999998754
No 262
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.20 E-value=0.0019 Score=57.05 Aligned_cols=242 Identities=10% Similarity=0.063 Sum_probs=126.4
Q ss_pred eeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEe-eecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCC
Q 022870 21 VTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW-VHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLS 99 (291)
Q Consensus 21 v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 99 (291)
|.++...+++.+. .|+.++.|..||..+++...... ... ..|.++...+ ++. |..|+.++-|..||..+.+..
T Consensus 175 i~~i~~d~~g~lw-igt~~~Gl~~~~~~~~~~~~~~~~~~~--~~i~~i~~d~--~g~-lwigt~~~Gl~~~~~~~~~~~ 248 (795)
T 4a2l_A 175 IASTLYRQGDQIY-IGTSTDGLYTYSITQKTFEKVIPILGT--KQIQAILQQS--PTR-IWVATEGAGLFLINPKTKEIK 248 (795)
T ss_dssp CEEEEEEETTEEE-EEESSSCEEEEETTTCCEEECC----C--CCEEEEEEEE--TTE-EEEEEBSSCEEEEETTTTEEE
T ss_pred eEEEEECCCCCEE-EEECCCCEEEEeCCCCeEEEecCCCCC--CeeEEEEEcC--CCC-EEEEECCCCeEEEeCCCCeEE
Confidence 8888888887544 46655458899987765443211 122 4488988887 644 555554444888998765432
Q ss_pred CCCc-----cccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCC-------CCCC---cccCCCCCcEE
Q 022870 100 SNPS-----LTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSL-------CDSK---DDVPAEGPKYM 164 (291)
Q Consensus 100 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~ 164 (291)
.-.. ..+....... +.............. .+..++............ .... +...++|. +.
T Consensus 249 ~~~~~~~~~~~l~~~~i~~--i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lW 324 (795)
T 4a2l_A 249 NYLHSPSNPKSISSNYIRS--LAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MW 324 (795)
T ss_dssp EECCCTTCTTSCSCSBEEE--EEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EE
T ss_pred EeecCCCCccccCCCeEEE--EEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EE
Confidence 1000 0111111111 112222222222222 233344332221111100 0111 55567775 44
Q ss_pred EEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCc
Q 022870 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (291)
Q Consensus 165 ~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (291)
+ |+.++-|..|+..+... ..+.... .........+.++. ..++ | .|..|+.++-|..||..+ +..
T Consensus 325 i--gt~~~Gl~~~~~~~~~~-~~~~~~~-----~~~~l~~~~V~~i~-~d~~---g--~lWiGt~~~Gl~~~~~~~-~~~ 389 (795)
T 4a2l_A 325 L--GTYFGGLNYYHPIRNRF-KNIRNIP-----YKNSLSDNVVSCIV-EDKD---K--NLWIGTNDGGLNLYNPIT-QRF 389 (795)
T ss_dssp E--EESSSCEEEECGGGGSS-EEECCCT-----TSSSCSCSSEEEEE-ECTT---S--CEEEEESSSCEEEECTTT-CCE
T ss_pred E--EECCCCeEEeCCCcccc-eEEcCCC-----CCCCCCCCeeEEEE-ECCC---C--CEEEEECCCCeEEEcCCC-CcE
Confidence 3 33456789998765542 2222100 00011123456654 5544 4 477788888899999876 332
Q ss_pred eeecc--------ccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCcee
Q 022870 245 LTAMK--------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVS 287 (291)
Q Consensus 245 ~~~~~--------~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~ 287 (291)
..... .....|.+++.++++..|..|+.++-|..||.+++++.
T Consensus 390 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~ 440 (795)
T 4a2l_A 390 TSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE 440 (795)
T ss_dssp EEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE
T ss_pred EEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE
Confidence 22111 12357899999998874556666667999998877653
No 263
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.20 E-value=0.00036 Score=59.21 Aligned_cols=78 Identities=13% Similarity=0.110 Sum_probs=51.5
Q ss_pred cCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccc
Q 022870 171 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV 250 (291)
Q Consensus 171 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 250 (291)
+|.|.-||+.+++.+.+.+. +. . ..+... . .. +. +++.|+.||.++.||.++ ++.+.+++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~-------~~-~-~~~g~~--~-ta-----gg-lvf~g~~dg~l~A~D~~t-G~~lW~~~~ 525 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE-------HL-P-LWAGVL--A-TA-----GN-LVFTGTGDGYFKAFDAKS-GKELWKFQT 525 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE-------SS-C-CCSCCE--E-ET-----TT-EEEEECTTSEEEEEETTT-CCEEEEEEC
T ss_pred cceEEEEECCCCCEEEEecC-------CC-C-Ccccce--E-eC-----CC-EEEEECCCCcEEEEECCC-CCEEEEecC
Confidence 68899999999998877663 11 1 111111 1 11 22 677799999999999999 888888875
Q ss_pred cccce-eEEEeecCCCee
Q 022870 251 HLEPV-LCLSIDESCNGG 267 (291)
Q Consensus 251 h~~~v-~~~~~~~~~~~l 267 (291)
..... .-+.|..+|+..
T Consensus 526 ~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 526 GSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp SSCCCSCCEEEEETTEEE
T ss_pred CCCcccCceEEEECCEEE
Confidence 43322 236666777644
No 264
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.17 E-value=0.00097 Score=56.65 Aligned_cols=211 Identities=13% Similarity=0.063 Sum_probs=118.0
Q ss_pred CCEEEEecC-CCeEEEEeC-CCCeEEEEEeeecCCc--c-------eEEEEEeecCCCCe----EEEEeCCCeEEEEECC
Q 022870 30 KPILFAGTT-GGELRIWDT-VQHRTVSSSWVHSAAH--G-------IVSVATGPSIGLNK----VISQGRDGTVKCWDIE 94 (291)
Q Consensus 30 ~~~l~s~~~-dg~v~iwd~-~~~~~~~~~~~~~~~~--~-------v~~~~~~~~~~~~~----l~s~~~dg~i~iwd~~ 94 (291)
+..++.++. ++.|.-+|. .+|+.+.++....... + ...+++.| .+.. ++.++.|+.|.-+|.+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p--~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWP--GDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEEC--CCSSSCCEEEEECTTSEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEe--cCCcceeEEEEEcCCCEEEEEECC
Confidence 446777777 899999999 8999988876543210 0 12345544 3345 8888999999999999
Q ss_pred CCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecC----C
Q 022870 95 NGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE----Q 170 (291)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~ 170 (291)
+++...+ ........ ....... ..+ .+ ..+++.++. .
T Consensus 140 TG~~~W~--~~~~~~~~---~~~~~ss--------------------------------P~v-~~-g~V~vg~~g~e~g~ 180 (599)
T 1w6s_A 140 TGETVWK--VENSDIKV---GSTLTIA--------------------------------PYV-VK-DKVIIGSSGAELGV 180 (599)
T ss_dssp TCCEEEE--EECCCGGG---TCBCCSC--------------------------------CEE-ET-TEEEECCBCGGGTC
T ss_pred CCCEEEe--ecCCCCCc---cceeecC--------------------------------CEE-EC-CEEEEEecccccCC
Confidence 9976441 11100000 0000000 001 12 234432211 3
Q ss_pred cCeEEEEeCCCcceeeEecccccC------CCCCCCCC-------------------cceeee-eEEEecCCCCCCceEE
Q 022870 171 LSEVEIWDLNTAERCTRLHQNSCG------GSPNFSSK-------------------GRGMCM-AVQAYLPSKSQGFVNV 224 (291)
Q Consensus 171 d~~i~~wd~~~~~~~~~~~~~~~~------~~~~~~~~-------------------~~~~~~-~~~~~~p~~~~g~~~l 224 (291)
++.|+-+|.++++.+-++...... +......+ ..+.++ ... +.+.. + .+
T Consensus 181 ~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a-~d~~~--g--~v 255 (599)
T 1w6s_A 181 RGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYA-YDPGT--N--LI 255 (599)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCE-EETTT--T--EE
T ss_pred CCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCcccccee-EeCCC--C--EE
Confidence 689999999999988776632100 00000000 000011 122 44442 3 45
Q ss_pred EeecCC----------------CcEEEEEccCCCCceeeccccc----------cceeEEEee-cCC---CeeEEecCCC
Q 022870 225 LAGYED----------------GSILVWDIRNPGIPLTAMKVHL----------EPVLCLSID-ESC---NGGISGGADQ 274 (291)
Q Consensus 225 ~~g~~d----------------g~i~vwd~~~~~~~~~~~~~h~----------~~v~~~~~~-~~~---~~l~s~s~dg 274 (291)
+.++.+ +.|..+|.++ ++.+..++... .++. +... .+| ..++.++.+|
T Consensus 256 y~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~T-G~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G 333 (599)
T 1w6s_A 256 YFGTGNPAPWNETMRPGDNKWTMTIFGRDADT-GEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNG 333 (599)
T ss_dssp EEECCCCSCSCGGGSCSCCTTSSEEEEEETTT-CCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTS
T ss_pred EEeCCCCccccCcccCCCccccceEEEEeCCC-CceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCc
Confidence 555444 4899999998 78776665321 1121 1221 466 5678899999
Q ss_pred eEEEEEcCCCceee
Q 022870 275 KIVLYNLDHSTVSH 288 (291)
Q Consensus 275 ~i~vw~~~~~~~~~ 288 (291)
.+++.|.++++++-
T Consensus 334 ~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 334 IVYTLDRTDGALVS 347 (599)
T ss_dssp EEEEEETTTCCEEE
T ss_pred EEEEEECCCCCEee
Confidence 99999999999874
No 265
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.14 E-value=0.00032 Score=60.50 Aligned_cols=73 Identities=8% Similarity=0.089 Sum_probs=48.2
Q ss_pred EEEEcC-CCCEEEEecCCC-----------eEEEEeCCCCeEE--EEEeeecCCcceEEEEEeecCCCCeEEEEeC-CCe
Q 022870 23 DVCFHQ-TKPILFAGTTGG-----------ELRIWDTVQHRTV--SSSWVHSAAHGIVSVATGPSIGLNKVISQGR-DGT 87 (291)
Q Consensus 23 ~l~~~~-~~~~l~s~~~dg-----------~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg~ 87 (291)
.+++.+ ++++++.|+.+. .+.+||..+++.. ..+..... ....++++.. ++.+++.|+. +..
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~-~~~~~~~~~~--~g~lyv~GG~~~~~ 266 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD-MFCPGISMDG--NGQIVVTGGNDAKK 266 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC-CSSCEEEECT--TSCEEEECSSSTTC
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC-CccccccCCC--CCCEEEeCCCCCCc
Confidence 456667 888888887543 6889998876532 22222111 1234567777 8888888884 558
Q ss_pred EEEEECCCCCC
Q 022870 88 VKCWDIENGGL 98 (291)
Q Consensus 88 i~iwd~~~~~~ 98 (291)
+.+||..+.+.
T Consensus 267 v~~yd~~t~~W 277 (656)
T 1k3i_A 267 TSLYDSSSDSW 277 (656)
T ss_dssp EEEEEGGGTEE
T ss_pred eEEecCcCCce
Confidence 99999987654
No 266
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.14 E-value=0.00098 Score=51.97 Aligned_cols=109 Identities=12% Similarity=-0.003 Sum_probs=65.0
Q ss_pred cccCCCCCcEEEEecCCcCeEEEEeCCCcc--eeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecC--
Q 022870 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAE--RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE-- 229 (291)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~-- 229 (291)
++++|+++.++++ -..++.|..||+.... ....+.. ..+ ...+. +.++ |. +.++...
T Consensus 190 ia~~~dg~~lyv~-d~~~~~I~~~~~~~~~~~~~~~~~~------------~~g-P~gi~-~d~~---G~-l~va~~~~~ 250 (322)
T 2fp8_A 190 AEVSADSSFVLVA-EFLSHQIVKYWLEGPKKGTAEVLVK------------IPN-PGNIK-RNAD---GH-FWVSSSEEL 250 (322)
T ss_dssp EEECTTSSEEEEE-EGGGTEEEEEESSSTTTTCEEEEEE------------CSS-EEEEE-ECTT---SC-EEEEEEEET
T ss_pred eEECCCCCEEEEE-eCCCCeEEEEECCCCcCCccceEEe------------CCC-CCCeE-ECCC---CC-EEEEecCcc
Confidence 7799998766654 3346889999987532 1111210 011 34454 7776 55 4443332
Q ss_pred --------CCcEEEEEccCCCCceeeccccc----cceeEEEeecCCCeeEEecCCCeEEEEEcCCC
Q 022870 230 --------DGSILVWDIRNPGIPLTAMKVHL----EPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 230 --------dg~i~vwd~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~ 284 (291)
.+.|..+|.. ++.+..+.... ..++++++. ++.++++...++.|.++++...
T Consensus 251 ~~~~~~~~~~~v~~~d~~--G~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 251 DGNMHGRVDPKGIKFDEF--GNILEVIPLPPPFAGEHFEQIQEH-DGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp TSSTTSCEEEEEEEECTT--SCEEEEEECCTTTTTSCCCEEEEE-TTEEEEECSSCSEEEEEEC---
T ss_pred cccccCCCccEEEEECCC--CCEEEEEECCCCCccccceEEEEe-CCEEEEeecCCCceEEEecccc
Confidence 4678888864 66666655332 356777764 5666677777889999998754
No 267
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.13 E-value=0.0015 Score=53.24 Aligned_cols=202 Identities=10% Similarity=0.022 Sum_probs=109.9
Q ss_pred ceeEEEEcC-CCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC-C----eEEEEEC
Q 022870 20 SVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD-G----TVKCWDI 93 (291)
Q Consensus 20 ~v~~l~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-g----~i~iwd~ 93 (291)
....|+++| ++..|+.+...+.|+.+|++.+....... .. .....++|++ ++++|+.+... + .+...+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~--~~P~~ia~d~--~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GL--SKVRTICWTH--EADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CC--SCEEEEEECT--TSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CC--CCcceEEEeC--CCCEEEEEeCCCCcccceEEEEeC
Confidence 457889997 34456555554889999988766544333 22 3478999999 88866665542 2 2333332
Q ss_pred CCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCe
Q 022870 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSE 173 (291)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~ 173 (291)
.+.... . . .... +..-..++++|++..+++ +-..++.
T Consensus 213 -~g~~~~--~------~-~l~~--------------------------------~~~p~giavdp~~g~lyv-~d~~~~~ 249 (430)
T 3tc9_A 213 -ESGFKV--I------T-ELTK--------------------------------GQNCNGAETHPINGELYF-NSWNAGQ 249 (430)
T ss_dssp -GGTSCS--E------E-EEEE--------------------------------CSSCCCEEECTTTCCEEE-EETTTTE
T ss_pred -CCceee--e------e-eecc--------------------------------CCCceEEEEeCCCCEEEE-EECCCCE
Confidence 222110 0 0 0000 000011678895445555 3444689
Q ss_pred EEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCc---eeeccc
Q 022870 174 VEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP---LTAMKV 250 (291)
Q Consensus 174 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~---~~~~~~ 250 (291)
|..+|...+........ +. ......++ |+|+ |+.++++-..++.|+.++....... ...+.+
T Consensus 250 V~~~~~~~~~~~~~~~~-------~~----~~~P~gia-~~pd---G~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag 314 (430)
T 3tc9_A 250 VFRYDFTTQETTPLFTI-------QD----SGWEFHIQ-FHPS---GNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCG 314 (430)
T ss_dssp EEEEETTTTEEEEEEEC-------SS----SSCCEEEE-ECTT---SSEEEEEETTTTEEEEEEEETTTTEECCCEEEEE
T ss_pred EEEEECCCCcEEEEEEc-------CC----CCcceeEE-EcCC---CCEEEEEECCCCEEEEEeCCcccccccceEEEec
Confidence 99999987654222221 00 12344565 9998 5434555567889999887631111 111111
Q ss_pred c---------------cccee-EEEee--------cCCCeeEEecCCCeEEEEEcCCCc
Q 022870 251 H---------------LEPVL-CLSID--------ESCNGGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 251 h---------------~~~v~-~~~~~--------~~~~~l~s~s~dg~i~vw~~~~~~ 285 (291)
. -.... .++.+ +++.+.++-...+.|+.++. +++
T Consensus 315 ~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~ 372 (430)
T 3tc9_A 315 QQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGR 372 (430)
T ss_dssp CTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSE
T ss_pred cCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCc
Confidence 1 01223 45553 44666666666778888883 343
No 268
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.13 E-value=0.0016 Score=50.68 Aligned_cols=207 Identities=10% Similarity=-0.079 Sum_probs=117.4
Q ss_pred ccceeEEEEcCCC-CEEEEecCCCeEEEEeCCC---CeEEEE-EeeecCCcceEEEEEeecCCCCeE-EEEeCCCeEEEE
Q 022870 18 RASVTDVCFHQTK-PILFAGTTGGELRIWDTVQ---HRTVSS-SWVHSAAHGIVSVATGPSIGLNKV-ISQGRDGTVKCW 91 (291)
Q Consensus 18 ~~~v~~l~~~~~~-~~l~s~~~dg~v~iwd~~~---~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~i~iw 91 (291)
-.....++|++.+ .++++-..++.|..+++.. +..... +.... .....+++.+ .+..| ++-...+.|.+.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~--~~p~glavd~--~~~~ly~~d~~~~~I~~~ 104 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDW--IHSNIYWTDSVLGTVSVA 104 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC--SCCCEEEEET--TTTEEEEEETTTTEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC--CCcCEEEEee--cCCeEEEEECCCCEEEEE
Confidence 3456789999854 4555666678999999875 122222 22111 2257888886 44444 455667889999
Q ss_pred ECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCc
Q 022870 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL 171 (291)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d 171 (291)
++....... +...... .+. .++++|.+..++.+.....
T Consensus 105 ~~~g~~~~~--~~~~~~~-----------~P~-----------------------------~iavdp~~g~ly~~d~~~~ 142 (316)
T 1ijq_A 105 DTKGVKRKT--LFRENGS-----------KPR-----------------------------AIVVDPVHGFMYWTDWGTP 142 (316)
T ss_dssp ETTSSSEEE--EEECTTC-----------CEE-----------------------------EEEEETTTTEEEEEECSSS
T ss_pred eCCCCceEE--EEECCCC-----------Ccc-----------------------------eEEeCCCCCEEEEEccCCC
Confidence 987532110 0000000 000 0567787766665432223
Q ss_pred CeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeecc--
Q 022870 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK-- 249 (291)
Q Consensus 172 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~-- 249 (291)
+.|..+++.... ...+.. . .-.....++ +.|++ ++ +.++-...+.|..+|+.. .....+.
T Consensus 143 ~~I~~~~~dG~~-~~~~~~-------~----~~~~P~gla-~d~~~--~~-lY~~D~~~~~I~~~d~dg--~~~~~~~~~ 204 (316)
T 1ijq_A 143 AKIKKGGLNGVD-IYSLVT-------E----NIQWPNGIT-LDLLS--GR-LYWVDSKLHSISSIDVNG--GNRKTILED 204 (316)
T ss_dssp CEEEEEETTSCC-EEEEEC-------S----SCSCEEEEE-EETTT--TE-EEEEETTTTEEEEEETTS--CSCEEEEEC
T ss_pred CeEEEEcCCCCC-eEEEEE-------C----CCCCceEEE-EeccC--CE-EEEEECCCCeEEEEecCC--CceEEEeec
Confidence 688888886433 333321 1 112345665 88762 33 556666778999999874 2222221
Q ss_pred -ccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 250 -VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 250 -~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
..-....+|+++. +.++++-...+.|..++..+++.+..
T Consensus 205 ~~~~~~P~giav~~-~~ly~~d~~~~~V~~~~~~~g~~~~~ 244 (316)
T 1ijq_A 205 EKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNL 244 (316)
T ss_dssp TTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEE
T ss_pred CCccCCcEEEEEEC-CEEEEEECCCCeEEEEeCCCCcceEE
Confidence 1224567888875 55666777788999999877765544
No 269
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.10 E-value=0.0023 Score=51.57 Aligned_cols=209 Identities=11% Similarity=-0.071 Sum_probs=117.0
Q ss_pred ccceeEEEEcCC-CCEEEEecCCCeEEEEeCCCC----eEEEEEeeecCCcceEEEEEeecCCCC-eEEEEeCCCeEEEE
Q 022870 18 RASVTDVCFHQT-KPILFAGTTGGELRIWDTVQH----RTVSSSWVHSAAHGIVSVATGPSIGLN-KVISQGRDGTVKCW 91 (291)
Q Consensus 18 ~~~v~~l~~~~~-~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~i~iw 91 (291)
-..+..++|++. +.++.+-...+.|..+++... .....+.... .....+++.+ .+. ++++-...+.|.+.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~--~~p~glavD~--~~~~lY~~d~~~~~I~~~ 186 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDW--IHSNIYWTDSVLGTVSVA 186 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC--SCEEEEEEET--TTTEEEEEETTTTEEEEE
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC--CCcccEEEEe--cCCceEEEECCCCeEEEE
Confidence 456788999984 444455566788988987652 1222222122 3367888886 434 44455567788888
Q ss_pred ECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCc
Q 022870 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL 171 (291)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d 171 (291)
+++...... +....... |. .++++|.+..++.+-....
T Consensus 187 ~~~g~~~~~--l~~~~~~~-----------P~-----------------------------~iavdp~~g~ly~td~~~~ 224 (400)
T 3p5b_L 187 DTKGVKRKT--LFRENGSK-----------PR-----------------------------AIVVDPVHGFMYWTDWGTP 224 (400)
T ss_dssp CTTTCSEEE--EEECSSCC-----------EE-----------------------------EEEEETTTTEEEEEECSSS
T ss_pred eCCCCceEE--EEeCCCCC-----------cc-----------------------------eEEEecccCeEEEEeCCCC
Confidence 887543210 00000000 00 0567777666665433334
Q ss_pred CeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccc-
Q 022870 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV- 250 (291)
Q Consensus 172 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~- 250 (291)
+.|...++........... .-.....++ +.|++ ++ +.++-...+.|..+|+.. .........
T Consensus 225 ~~I~~~~~dG~~~~~~~~~------------~l~~P~gla-vd~~~--~~-lY~aD~~~~~I~~~d~dG-~~~~~~~~~~ 287 (400)
T 3p5b_L 225 AKIKKGGLNGVDIYSLVTE------------NIQWPNGIT-LDLLS--GR-LYWVDSKLHSISSIDVNG-GNRKTILEDE 287 (400)
T ss_dssp CCEEEEETTSCSCEEEECS------------SCSCEEEEE-EETTT--TE-EEEEETTTTEEEEEETTS-CCCEEEEECS
T ss_pred CEEEEEeCCCCccEEEEEC------------CCCceEEEE-EEeCC--CE-EEEEECCCCEEEEEeCCC-CccEEEEeCC
Confidence 6788888875443332221 112345565 88762 33 555556678999999874 322222221
Q ss_pred -cccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeeee
Q 022870 251 -HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 251 -h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
.-....+|++..+ .++++-...+.|..++..+++.+..+
T Consensus 288 ~~l~~P~gl~v~~~-~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 288 KRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp STTSSEEEEEEETT-EEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred CCCCCCEEEEEeCC-EEEEecCCCCeEEEEEcCCCCceEEE
Confidence 2344567888554 45566667788999997777655443
No 270
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.06 E-value=0.0002 Score=62.15 Aligned_cols=227 Identities=9% Similarity=-0.060 Sum_probs=115.8
Q ss_pred CCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEE-eCCCeEEEEECCC----CCCCCCCccccccceEEE
Q 022870 39 GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ-GRDGTVKCWDIEN----GGLSSNPSLTIKTNSYHF 113 (291)
Q Consensus 39 dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~-~~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~ 113 (291)
.+.|+..++...+....+... ..+..++|.+ .+..|+.+ ...+.|+.+++.+ ..... +..........
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~---~~p~gla~d~--~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~--~i~~~~~~P~g 457 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNL---RNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDT--VISRDIQAPDG 457 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCC---TTCCCCEEET--TTTEEEECCTTTTSBEEEESCCCCC-CCCCC--BCCSCC--CCC
T ss_pred ccceEEEeCCCCcceeeeccC---cceEEEcccc--ccCeEEEEecCCCeEEEEecCCCCCCcceEE--EEeCCCCCcce
Confidence 357888888766554433332 2367899998 65666655 4567899999875 11111 11100001111
Q ss_pred EEeecccCccceeccCCCCceeeecccCccccc---cCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecc
Q 022870 114 CKLSLVKEPYANAKQANEPKDCYEREVGETVDT---DSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQ 190 (291)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~ 190 (291)
..+.........+-.....+..+++........ .+..-..++++|.+..++++-....+.|..+++..... ..+..
T Consensus 458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~~ 536 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVT 536 (699)
T ss_dssp EECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEESC
T ss_pred EEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEEe
Confidence 111111111111112223333334333221111 11111228899987776653322236788887764322 22211
Q ss_pred cccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeecc--ccccceeEEEeecCCCeeE
Q 022870 191 NSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK--VHLEPVLCLSIDESCNGGI 268 (291)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~ 268 (291)
. .......++ |.|++ ++ ++++-...+.|.++|+.. ......+. .......+|+++.+ .+++
T Consensus 537 -------~----~l~~PnGla-vd~~~--~~-LY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~~~P~glavd~~-~lyw 599 (699)
T 1n7d_A 537 -------E----NIQWPNGIT-LDLLS--GR-LYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFED-KVFW 599 (699)
T ss_dssp -------S----SCSSCCCEE-ECTTT--CC-EEEEETTTTEEEEECSSS-SCCEEECCCSSSCSSCCCCEEETT-EEEE
T ss_pred -------C----CCCCccEEE-EeccC--CE-EEEEecCCCeEEEEccCC-CceEEEEecCCcCCCceEeEEECC-EEEE
Confidence 0 012234454 88873 33 556666778999999874 22222221 12234567778776 4556
Q ss_pred EecCCCeEEEEEcCCCceeeee
Q 022870 269 SGGADQKIVLYNLDHSTVSHCV 290 (291)
Q Consensus 269 s~s~dg~i~vw~~~~~~~~~~~ 290 (291)
+....+.|..++..+++.+..|
T Consensus 600 td~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 600 TDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp ECSTTTCEEEEETTTEEEEECC
T ss_pred EeCCCCeEEEEEccCCCceEEe
Confidence 6667789999998888776654
No 271
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.04 E-value=0.00094 Score=56.55 Aligned_cols=209 Identities=12% Similarity=0.078 Sum_probs=115.1
Q ss_pred CCEEEEecC-CCeEEEEeC-CCCeEEEEEeeecCCc--------ce-EEEEEeecCCCCeEEEEeCCCeEEEEECCCCCC
Q 022870 30 KPILFAGTT-GGELRIWDT-VQHRTVSSSWVHSAAH--------GI-VSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98 (291)
Q Consensus 30 ~~~l~s~~~-dg~v~iwd~-~~~~~~~~~~~~~~~~--------~v-~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 98 (291)
+..++.++. ++.|.-+|. .+|+.+.......... .+ ..+++ .+..++.++.|+.|..+|.++++.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~v~~~dg~l~alD~~tG~~ 137 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY----GAGQIVKKQANGHLLALDAKTGKI 137 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE----ETTEEEEECTTSEEEEEETTTCCE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE----ECCEEEEEeCCCEEEEEECCCCCE
Confidence 346666777 899999999 8999988775432100 00 11222 346888888999999999999876
Q ss_pred CCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCC--CCCcEEEEecC----CcC
Q 022870 99 SSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPA--EGPKYMAVAGE----QLS 172 (291)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~----~d~ 172 (291)
..+ ......... .. +.-+| .+..+++.+.. .++
T Consensus 138 ~W~--~~~~~~~~~---~~------------------------------------~~~~P~v~~g~v~vg~~~~~~~~~g 176 (571)
T 2ad6_A 138 NWE--VEVCDPKVG---ST------------------------------------LTQAPFVAKDTVLMGCSGAELGVRG 176 (571)
T ss_dssp EEE--EECCCGGGT---CB------------------------------------CCSCCEEETTEEEEECBCGGGTCCC
T ss_pred EEE--ecCCCCCcc---ce------------------------------------eccCCEEECCEEEEEecCCccCCCC
Confidence 441 111000000 00 00111 12344432221 168
Q ss_pred eEEEEeCCCcceeeEecccccC------CCCCCCCC-------------------cceee-eeEEEecCCCCCCceEEEe
Q 022870 173 EVEIWDLNTAERCTRLHQNSCG------GSPNFSSK-------------------GRGMC-MAVQAYLPSKSQGFVNVLA 226 (291)
Q Consensus 173 ~i~~wd~~~~~~~~~~~~~~~~------~~~~~~~~-------------------~~~~~-~~~~~~~p~~~~g~~~l~~ 226 (291)
.|..+|.++++.+.++...... +....... ..+.+ ..+. +.+. .+ .++.
T Consensus 177 ~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a-~d~~--~g--~vy~ 251 (571)
T 2ad6_A 177 AVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYA-YDPK--LN--LFYY 251 (571)
T ss_dssp EEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCE-EETT--TT--EEEE
T ss_pred EEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEE-EcCC--CC--eEEE
Confidence 9999999999988776531100 00000000 00000 1122 5554 23 3444
Q ss_pred ecCC----------------CcEEEEEccCCCCceeeccc--ccc----ceeEE---EeecCCC---eeEEecCCCeEEE
Q 022870 227 GYED----------------GSILVWDIRNPGIPLTAMKV--HLE----PVLCL---SIDESCN---GGISGGADQKIVL 278 (291)
Q Consensus 227 g~~d----------------g~i~vwd~~~~~~~~~~~~~--h~~----~v~~~---~~~~~~~---~l~s~s~dg~i~v 278 (291)
++.+ +.|..+|.++ ++.+..++. |.. .+.+. ....+|+ .++.++.+|.+++
T Consensus 252 ~~g~~~~~~~~~~~gd~~y~~~v~Ald~~t-G~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~ 330 (571)
T 2ad6_A 252 GSGNPAPWNETMRPGDNKWTMTIWGRDLDT-GMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYT 330 (571)
T ss_dssp ECCCCSCSCGGGSCSCCTTTTEEEEEETTT-CCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEE
T ss_pred ECCCCccccCCccCCCceeEEEEEEEecCC-CcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEE
Confidence 4321 3699999998 777766652 211 11121 2224663 6778889999999
Q ss_pred EEcCCCceeee
Q 022870 279 YNLDHSTVSHC 289 (291)
Q Consensus 279 w~~~~~~~~~~ 289 (291)
+|.++++++-.
T Consensus 331 lD~~tG~~~w~ 341 (571)
T 2ad6_A 331 LNRENGNLIVA 341 (571)
T ss_dssp EETTTCCEEEE
T ss_pred EECCCCCEEee
Confidence 99999988643
No 272
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.99 E-value=0.0039 Score=50.02 Aligned_cols=197 Identities=14% Similarity=0.008 Sum_probs=111.4
Q ss_pred eeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEE-EEeCCCeEEEEECCCCCCC
Q 022870 21 VTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLS 99 (291)
Q Consensus 21 v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~ 99 (291)
-+|.+..+.+ +|+.+. ...|+..++........+... .....++|.+ .+..|+ +-...+.|..+++......
T Consensus 79 ~~C~~~~~~~-~l~~~~-~~~I~~i~~~~~~~~~~~~~~---~~~~gl~~d~--~~~~ly~~D~~~~~I~r~~~~g~~~~ 151 (386)
T 3v65_B 79 RSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNNL---ENAIALDFHH--RRELVFWSDVTLDRILRANLNGSNVE 151 (386)
T ss_dssp SCEEECSSCC-EEEEEC-BSCEEEECTTSCCCEEEECSC---SCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCCEE
T ss_pred CeECCccccc-eeEeec-CccceeeccCCCcEEEEecCC---CccEEEEEec--CCCeEEEEeCCCCcEEEEecCCCCcE
Confidence 3455555544 444433 356888888766544433332 3378999997 545554 5456778988988765311
Q ss_pred CCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeC
Q 022870 100 SNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDL 179 (291)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~ 179 (291)
. + +... +..-..+++++.+..++++ -...+.|.+.++
T Consensus 152 ~--~--~~~~--------------------------------------~~~p~glavd~~~g~lY~~-d~~~~~I~~~~~ 188 (386)
T 3v65_B 152 E--V--VSTG--------------------------------------LESPGGLAVDWVHDKLYWT-DSGTSRIEVANL 188 (386)
T ss_dssp E--E--ECSS--------------------------------------CSCCCCEEEETTTTEEEEE-ETTTTEEEECBT
T ss_pred E--E--EeCC--------------------------------------CCCccEEEEEeCCCeEEEE-cCCCCeEEEEeC
Confidence 0 0 0000 0000015677766666653 444678888888
Q ss_pred CCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCC-CcEEEEEccCCCCceeeccccccceeEE
Q 022870 180 NTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED-GSILVWDIRNPGIPLTAMKVHLEPVLCL 258 (291)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d-g~i~vwd~~~~~~~~~~~~~h~~~v~~~ 258 (291)
........+.. + ......++ +.|.+ |. ++++-..+ +.|+.+++.. ..........-...+.|
T Consensus 189 dg~~~~~l~~~-------~-----l~~P~gia-vdp~~--g~-ly~td~~~~~~I~r~~~dG-~~~~~~~~~~~~~PnGl 251 (386)
T 3v65_B 189 DGAHRKVLLWQ-------S-----LEKPRAIA-LHPME--GT-IYWTDWGNTPRIEASSMDG-SGRRIIADTHLFWPNGL 251 (386)
T ss_dssp TSCSCEEEECS-------S-----CSCEEEEE-EETTT--TE-EEEEECSSSCEEEEEETTS-CSCEEEECSSCSCEEEE
T ss_pred CCCceEEeecC-------C-----CCCCcEEE-EEcCC--Ce-EEEeccCCCCEEEEEeCCC-CCcEEEEECCCCCeeeE
Confidence 75443332221 1 12345555 88762 43 44554445 7899999874 22222222234467899
Q ss_pred EeecCCCee-EEecCCCeEEEEEcCCC
Q 022870 259 SIDESCNGG-ISGGADQKIVLYNLDHS 284 (291)
Q Consensus 259 ~~~~~~~~l-~s~s~dg~i~vw~~~~~ 284 (291)
++++++..| ++-+..+.|..++++..
T Consensus 252 avd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 252 TIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp EEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred EEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 999755444 55566788999998754
No 273
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.98 E-value=0.0099 Score=54.57 Aligned_cols=76 Identities=11% Similarity=0.031 Sum_probs=51.8
Q ss_pred ccceeEEEEcCC------CCEEEEecC-CCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEE
Q 022870 18 RASVTDVCFHQT------KPILFAGTT-GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (291)
Q Consensus 18 ~~~v~~l~~~~~------~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~i 90 (291)
...|.|+++.|. +.+++.|.. |++|+|+++.+-+.+........ ....++.+.......+|..|-.||.+..
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~-~~p~si~l~~~~~~~~L~igl~dG~l~~ 631 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGE-IIPRSILMTTFESSHYLLCALGDGALFY 631 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSS-CCEEEEEEEEETTEEEEEEEETTSEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCC-CCCcEEEEEEeCCCcEEEEEeCCCeEEE
Confidence 457999999863 368999986 99999999987666654433211 2345555543213357888989998876
Q ss_pred EECC
Q 022870 91 WDIE 94 (291)
Q Consensus 91 wd~~ 94 (291)
+.+.
T Consensus 632 ~~~d 635 (1158)
T 3ei3_A 632 FGLN 635 (1158)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6554
No 274
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.96 E-value=0.0011 Score=58.04 Aligned_cols=158 Identities=9% Similarity=0.035 Sum_probs=89.3
Q ss_pred ceEEEEEe-ecCCCCeEEEE-eCCC----eEEEEECCCC-CCCCCCccccccceEEEEEeecccCccceeccCCCCceee
Q 022870 64 GIVSVATG-PSIGLNKVISQ-GRDG----TVKCWDIENG-GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCY 136 (291)
Q Consensus 64 ~v~~~~~~-~~~~~~~l~s~-~~dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (291)
.+...+|+ | ||++|+-+ +.+| +|+++|+.++ +.... .+ ... ...
T Consensus 175 ~~~~~~~S~P--DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~---~~-----~~~---~~~---------------- 225 (751)
T 2xe4_A 175 DVMEVKPAPP--EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD---KV-----SGT---NGE---------------- 225 (751)
T ss_dssp EEEEEEECTT--TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC---CE-----EEE---CSC----------------
T ss_pred EEeeeEecCC--CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc---cc-----cCc---eee----------------
Confidence 47889999 9 99887743 3333 5999999987 53210 00 000 000
Q ss_pred ecccCccccccCCCCCCcccCCCCCcEEEEecCCc---CeEEEEeCCCcce--eeEecccccCCCCCCCCCcceeeeeEE
Q 022870 137 EREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL---SEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQ 211 (291)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d---~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (291)
++|+|||+.++.+.-... ..|+++++.+++. ...+.. . .......+.
T Consensus 226 -----------------~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~-------~----~~~~~~~~~ 277 (751)
T 2xe4_A 226 -----------------IVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEE-------H----NPLFSAFMY 277 (751)
T ss_dssp -----------------CEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEEC-------C----CTTCEEEEE
T ss_pred -----------------EEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEec-------C----CCceEEEEE
Confidence 569999988876543211 3688888877642 222321 0 112344565
Q ss_pred EecCCCCCCceEEEeec---CCCcEEEEEccCCCCce--eec-cccccceeEEEeecCCCeeEEecCC----CeEEEEEc
Q 022870 212 AYLPSKSQGFVNVLAGY---EDGSILVWDIRNPGIPL--TAM-KVHLEPVLCLSIDESCNGGISGGAD----QKIVLYNL 281 (291)
Q Consensus 212 ~~~p~~~~g~~~l~~g~---~dg~i~vwd~~~~~~~~--~~~-~~h~~~v~~~~~~~~~~~l~s~s~d----g~i~vw~~ 281 (291)
|+|+ |+ +|+... ....|+++|+.++.... ..+ ........++.|+..+.+++....+ ..|..+++
T Consensus 278 -~SpD---g~-~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~ 352 (751)
T 2xe4_A 278 -KAAD---TN-TLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPR 352 (751)
T ss_dssp -ECTT---SS-EEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEET
T ss_pred -ECCC---CC-EEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcC
Confidence 9998 55 444333 34578889998632122 333 3334556666665544444554443 36777777
Q ss_pred CC
Q 022870 282 DH 283 (291)
Q Consensus 282 ~~ 283 (291)
.+
T Consensus 353 ~~ 354 (751)
T 2xe4_A 353 GQ 354 (751)
T ss_dssp TS
T ss_pred CC
Confidence 64
No 275
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.91 E-value=0.0048 Score=48.71 Aligned_cols=203 Identities=9% Similarity=-0.030 Sum_probs=103.3
Q ss_pred ceeEEEEcCC-CCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCe-EEEEeCCCeEEEEECCCCC
Q 022870 20 SVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNK-VISQGRDGTVKCWDIENGG 97 (291)
Q Consensus 20 ~v~~l~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~ 97 (291)
.+..++|++. +.++++-...+.|..+++..+.....+.... .....+++.+ .+.. +++-...+.|.+.++....
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~--~~p~glavd~--~~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGL--ESPGGLAVDW--VHDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC--SCCCEEEEET--TTTEEEEEETTTTEEEEEETTSCS
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCC--CCccEEEEec--CCCeEEEEcCCCCeEEEEcCCCCc
Confidence 4678899974 4445565677889999987654333332222 2256888886 4444 4555667899999987543
Q ss_pred CCCCCccccccceEEEEEeecccCccceeccCC-CCceeeecccCccccccCCC-C--CCcccCCCCCcEEEEecCCcCe
Q 022870 98 LSSNPSLTIKTNSYHFCKLSLVKEPYANAKQAN-EPKDCYEREVGETVDTDSLC-D--SKDDVPAEGPKYMAVAGEQLSE 173 (291)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~g~~d~~ 173 (291)
... +............+.+........-... ..+..++++........... . ..++++|++..++.+ -...+.
T Consensus 150 ~~~--l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~a-D~~~~~ 226 (349)
T 3v64_C 150 RKV--LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWV-DAKHHV 226 (349)
T ss_dssp CEE--EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEE-ETTTTE
T ss_pred eEE--EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEE-ECCCCE
Confidence 211 1111111222222332222111111111 22222233222111110011 1 118999888777764 444688
Q ss_pred EEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeec
Q 022870 174 VEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 248 (291)
Q Consensus 174 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~ 248 (291)
|..+|+........+.. . ......++ +. . +. ++++-...+.|..+|..+ ++....+
T Consensus 227 I~~~~~dG~~~~~~~~~--------~----~~~P~gia-v~-~---~~-ly~td~~~~~V~~~~~~~-G~~~~~i 282 (349)
T 3v64_C 227 IERANLDGSHRKAVISQ--------G----LPHPFAIT-VF-E---DS-LYWTDWHTKSINSANKFT-GKNQEII 282 (349)
T ss_dssp EEEEETTSCSCEEEECS--------S----CSSEEEEE-EE-T---TE-EEEEETTTTEEEEEETTT-CCSCEEE
T ss_pred EEEEeCCCCceEEEEeC--------C----CCCceEEE-EE-C---CE-EEEecCCCCeEEEEEccC-CCccEEe
Confidence 99999875433222221 1 12334454 42 1 33 666667788898888655 4444433
No 276
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.90 E-value=0.0068 Score=49.94 Aligned_cols=209 Identities=9% Similarity=-0.009 Sum_probs=114.3
Q ss_pred ceeEEEEcC-CCCEE-EEecCCCeEEEEeCCCCeEEEEEeeec-CCcceEEEEE-------eecCCCCeEEEEeCCC---
Q 022870 20 SVTDVCFHQ-TKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHS-AAHGIVSVAT-------GPSIGLNKVISQGRDG--- 86 (291)
Q Consensus 20 ~v~~l~~~~-~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~-------~~~~~~~~l~s~~~dg--- 86 (291)
....|+|+| ++..| ++....+.|++.|++++.......... .......++| ++ +++.|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~--~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD--EAEYMIVAIDYDGKG 217 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC--TTCEEEEEECCCTTG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC--CCCEEEEEeCCCCCc
Confidence 356899998 34444 444445679999988776655443321 1134789999 99 888676665543
Q ss_pred ----eEEEEECCC-CCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCC
Q 022870 87 ----TVKCWDIEN-GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGP 161 (291)
Q Consensus 87 ----~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
.|.+.+... +.....+ .......+. .+ ..++++|++.
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~------~~~~v~~~~---~p-----------------------------~giavdp~~g 259 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRS------DIQLIAAYK---QC-----------------------------NGATIHPING 259 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTS------CEEEEEEES---CC-----------------------------CCEEECTTTC
T ss_pred ccCceEEEEecCCCCceeecc------cceeeccCC---Cc-----------------------------eEEEEcCCCC
Confidence 255555333 1111000 000000000 00 0166889777
Q ss_pred cEEEEecCCcCeEEEEeCC-------Ccce-----------eeE-ecccccCCCCCCCCCcceeeeeEEEecCCCCCCce
Q 022870 162 KYMAVAGEQLSEVEIWDLN-------TAER-----------CTR-LHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFV 222 (291)
Q Consensus 162 ~~~~~~g~~d~~i~~wd~~-------~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~ 222 (291)
.++++ -..++.|..+|+. ++.. ... +.. + .......++ |+|+ |..
T Consensus 260 ~LYvt-d~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-------~----~~~~p~~ia-~~p~---G~~ 323 (496)
T 3kya_A 260 ELYFN-SYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-------A----DPSWEFQIF-IHPT---GKY 323 (496)
T ss_dssp CEEEE-ETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-------S----SSSCCEEEE-ECTT---SSE
T ss_pred eEEEE-ECCCCEEEEEecccccccccCceeecccccccccccceeEec-------C----CCCCceEEE-EcCC---CCE
Confidence 77764 4457889999997 4443 111 110 0 122345665 9998 442
Q ss_pred EEEeecCCCcEEEEEccCCCCce---eecccc------c---------ccee-EEEee-------cCCCeeEEecCCCeE
Q 022870 223 NVLAGYEDGSILVWDIRNPGIPL---TAMKVH------L---------EPVL-CLSID-------ESCNGGISGGADQKI 276 (291)
Q Consensus 223 ~l~~g~~dg~i~vwd~~~~~~~~---~~~~~h------~---------~~v~-~~~~~-------~~~~~l~s~s~dg~i 276 (291)
++++-+....|+.++.......+ ..+.+. . .... .++.+ .++.++++=...+.|
T Consensus 324 lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rI 403 (496)
T 3kya_A 324 AYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCV 403 (496)
T ss_dssp EEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEE
T ss_pred EEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEE
Confidence 34555677899997765311111 112111 0 1244 45555 567777777778899
Q ss_pred EEEEcCCCc
Q 022870 277 VLYNLDHST 285 (291)
Q Consensus 277 ~vw~~~~~~ 285 (291)
+.++. ++.
T Consensus 404 r~i~~-~G~ 411 (496)
T 3kya_A 404 RKVTP-EGI 411 (496)
T ss_dssp EEECT-TCB
T ss_pred EEEeC-CCC
Confidence 99984 443
No 277
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.89 E-value=0.011 Score=52.22 Aligned_cols=246 Identities=11% Similarity=0.046 Sum_probs=126.5
Q ss_pred ccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeee-----cCCcceEEEEEeecCCCCeEEEEeCCCeEEEEE
Q 022870 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH-----SAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (291)
Q Consensus 18 ~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd 92 (291)
...|.++...+++.+. .|+.++-+.+||..+++........ -....|.++...+ +|. |..|..+ -|.+||
T Consensus 214 ~~~i~~i~~d~~g~lw-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~--~g~-lWigt~~-Gl~~~~ 288 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIW-VATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDS--QNR-LWIGTFN-DLNIYH 288 (795)
T ss_dssp CCCEEEEEEEETTEEE-EEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECT--TSC-EEEEESS-CEEEEE
T ss_pred CCeeEEEEEcCCCCEE-EEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcC--CCC-EEEEeCC-hhheEc
Confidence 4568888888877544 4554444889998776554322111 0114599998887 755 4455555 488899
Q ss_pred CCCCCCCCCC-----ccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccC------CCCCC---cccCC
Q 022870 93 IENGGLSSNP-----SLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDS------LCDSK---DDVPA 158 (291)
Q Consensus 93 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~~~ 158 (291)
..+.+...-. ...+....... +................+..++........... ..... +...+
T Consensus 289 ~~~~~~~~~~~~~~~~~~l~~~~i~~--i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~ 366 (795)
T 4a2l_A 289 EGTDSFASYSSNPVENGSLSQRSVRS--IFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK 366 (795)
T ss_dssp TTTTEEEEECCCTTSTTSCSSSCEEE--EEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT
T ss_pred CCCCeEEEEecCCCCCCCCCCCcEEE--EEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC
Confidence 8765432100 00111111111 112222223333333333333332221110000 01111 44556
Q ss_pred CCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCC-CCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEE
Q 022870 159 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFS-SKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (291)
Q Consensus 159 ~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd 237 (291)
+|. +.+ |..++-|..||..+++......... ... ......+.++. ..++ |. .|..|+.++-|..||
T Consensus 367 ~g~-lWi--Gt~~~Gl~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~v~~i~-~d~~---g~-~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 367 DKN-LWI--GTNDGGLNLYNPITQRFTSYTLQED-----ESARGIGSNNIKAVY-VDEK---KS-LVYIGTHAGGLSILH 433 (795)
T ss_dssp TSC-EEE--EESSSCEEEECTTTCCEEEECCC-----------CCSCSCEEEEE-EETT---TT-EEEEEETTTEEEEEE
T ss_pred CCC-EEE--EECCCCeEEEcCCCCcEEEEecCCC-----CcccCCCCccEEEEE-EcCC---CC-EEEEEeCcCceeEEe
Confidence 664 443 4445679999988765432221000 000 00123456654 5444 43 388888888899999
Q ss_pred ccCCCCceeecc-----ccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCcee
Q 022870 238 IRNPGIPLTAMK-----VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVS 287 (291)
Q Consensus 238 ~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~ 287 (291)
..+ ++.. .+. .....|.++..++++.+.+.. .+| +.+|+.+++++.
T Consensus 434 ~~~-~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~G-l~~~~~~~~~~~ 484 (795)
T 4a2l_A 434 RNS-GQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGT-LSA-LVRFNPEQRSFT 484 (795)
T ss_dssp TTT-CCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEE-SSC-EEEEETTTTEEE
T ss_pred CCC-CcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEe-cCc-eeEEeCCCCeEE
Confidence 886 4332 222 234578999999988855554 344 888998776543
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.89 E-value=0.0067 Score=49.45 Aligned_cols=202 Identities=10% Similarity=0.030 Sum_probs=112.6
Q ss_pred ceeEEEEcCC--CCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC----e-EEEEE
Q 022870 20 SVTDVCFHQT--KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG----T-VKCWD 92 (291)
Q Consensus 20 ~v~~l~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg----~-i~iwd 92 (291)
....++|+|+ +..|+.+...+.|+.+|..++....... .. .....+++++ +++ |+.+...+ . +...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~--~~P~giavd~--dG~-lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NI--GQCADVNFTL--NGD-MVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CC--SCEEEEEECT--TCC-EEEEECCSCTTSEEEEEEC
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CC--CCccEEEECC--CCC-EEEEcCCCCcccceEEEEE
Confidence 3578999984 3345555444889999987776654433 22 3378999999 888 55444322 1 22222
Q ss_pred CCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcC
Q 022870 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS 172 (291)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~ 172 (291)
.... ... ...... +..-..++++|++..+++ +-..++
T Consensus 214 ~~~~-~~~---------~~~~~~--------------------------------~~~P~giavd~~~G~lyv-~d~~~~ 250 (433)
T 4hw6_A 214 RASG-FTE---------RLSLCN--------------------------------ARGAKTCAVHPQNGKIYY-TRYHHA 250 (433)
T ss_dssp GGGT-TCC---------EEEEEE--------------------------------CSSBCCCEECTTTCCEEE-CBTTCS
T ss_pred CCCC-eec---------cccccc--------------------------------cCCCCEEEEeCCCCeEEE-EECCCC
Confidence 2111 000 000000 000011778884445554 444578
Q ss_pred eEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCC-CCc--eeecc
Q 022870 173 EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP-GIP--LTAMK 249 (291)
Q Consensus 173 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~-~~~--~~~~~ 249 (291)
.|+.+|..++.....+... +. ......++ |+|+ |..++++-...+.|+.++.... +.. ...+.
T Consensus 251 ~V~~~d~~~g~~~~~~~~~------~~----~~~~~~ia-~dpd---G~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~a 316 (433)
T 4hw6_A 251 MISSYDPATGTLTEEEVMM------DT----KGSNFHIV-WHPT---GDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVC 316 (433)
T ss_dssp EEEEECTTTCCEEEEEEEC------SC----CSSCEEEE-ECTT---SSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEE
T ss_pred EEEEEECCCCeEEEEEecc------CC----CCCcccEE-EeCC---CCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEE
Confidence 9999999877652332210 11 11122465 9998 4424555566789999887521 211 11111
Q ss_pred cc---------------ccceeEEEe---------ecCCCeeEEecCCCeEEEEEcCCCc
Q 022870 250 VH---------------LEPVLCLSI---------DESCNGGISGGADQKIVLYNLDHST 285 (291)
Q Consensus 250 ~h---------------~~~v~~~~~---------~~~~~~l~s~s~dg~i~vw~~~~~~ 285 (291)
+. -.....+++ ++++.+.++-...+.|+.++. ++.
T Consensus 317 g~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~ 375 (433)
T 4hw6_A 317 GQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR 375 (433)
T ss_dssp ECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE
T ss_pred ecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC
Confidence 11 124677999 788888788777889999985 443
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.88 E-value=0.011 Score=51.91 Aligned_cols=208 Identities=10% Similarity=-0.095 Sum_probs=115.5
Q ss_pred ccceeEEEEcC-CCCEEEEecCCCeEEEEeCCCC----eEEEEEeeecCCcceEEEEEeecCCCC-eEEEEeCCCeEEEE
Q 022870 18 RASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQH----RTVSSSWVHSAAHGIVSVATGPSIGLN-KVISQGRDGTVKCW 91 (291)
Q Consensus 18 ~~~v~~l~~~~-~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~i~iw 91 (291)
...+..|+|++ ++.++++-...+.|+.+++... .....+.... .....|++.+ .++ ++++-...+.|.+.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l--~~P~GLAvD~--~~~~LY~tD~~~~~I~v~ 498 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDW--IHSNIYWTDSVLGTVSVA 498 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC--SCCCEEEEET--TTTEEEEEETTTTEEEEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC--CCcceeeeee--cCCcEEEEecCCCeEEEE
Confidence 44567889988 4545556666788988888642 1222222122 2367888887 554 44455667889999
Q ss_pred ECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCc
Q 022870 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL 171 (291)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d 171 (291)
++....... +.......... ++++|.+.+++.+-....
T Consensus 499 ~ldG~~~~~--l~~~~l~~P~g----------------------------------------IaVDp~~g~LYwtD~g~~ 536 (791)
T 3m0c_C 499 DTKGVKRKT--LFRENGSKPRA----------------------------------------IVVDPVHGFMYWTDWGTP 536 (791)
T ss_dssp ETTSSSEEE--EEECTTCCEEE----------------------------------------EEEETTTTEEEEEECSSS
T ss_pred eCCCCeEEE--EEeCCCCCcce----------------------------------------EEEecCCCCEEEecCCCC
Confidence 987543210 00000000000 567787666665433323
Q ss_pred CeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccc-
Q 022870 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV- 250 (291)
Q Consensus 172 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~- 250 (291)
+.|...++........+.. . ......++ +.+.. ++ ++++-...+.|..+++.. ......+..
T Consensus 537 ~~I~~~~~dG~~~~~lv~~--------~----l~~P~GLa-vD~~~--~~-LYwaD~~~~~I~~~d~dG-~~~~~v~~~~ 599 (791)
T 3m0c_C 537 AKIKKGGLNGVDIYSLVTE--------N----IQWPNGIT-LDLLS--GR-LYWVDSKLHSISSIDVNG-GNRKTILEDE 599 (791)
T ss_dssp CEEEEEETTSCCEEEEECS--------S----CSCEEEEE-EETTT--TE-EEEEETTTTEEEEEETTS-CSCEEEEECT
T ss_pred CeEEEEecCCCceEEEEeC--------C----CCCceEEE-EecCC--Ce-EEEEeCCCCcEEEEecCC-CceEEEecCC
Confidence 7899999875444333321 1 12345565 77662 43 445556677899999874 322222222
Q ss_pred -cccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 251 -HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 251 -h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
.-....+|++..+ .++++-...+.|...+..+++.+..
T Consensus 600 ~~l~~P~glav~~~-~lYwtD~~~~~I~~~dk~tG~~~~~ 638 (791)
T 3m0c_C 600 KRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNL 638 (791)
T ss_dssp TTTSSEEEEEEETT-EEEEEETTTTEEEEEETTTCCCCEE
T ss_pred CccCCCCEEEEeCC-EEEEEECCCCEEEEEeCCCCcceEE
Confidence 1234567777654 4455656678888888777655444
No 280
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.86 E-value=0.0032 Score=51.32 Aligned_cols=216 Identities=10% Similarity=0.014 Sum_probs=108.3
Q ss_pred EEecCCccceeEEEEcCCCCEEEEecC-CC----eEEEEeCCCCeEE--EEEeeecCCcceEEEEEeecCCCCeEE-EEe
Q 022870 12 AVLRGHRASVTDVCFHQTKPILFAGTT-GG----ELRIWDTVQHRTV--SSSWVHSAAHGIVSVATGPSIGLNKVI-SQG 83 (291)
Q Consensus 12 ~~l~~h~~~v~~l~~~~~~~~l~s~~~-dg----~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~ 83 (291)
..+.........++|+++|++|+.+.. ++ .+.+.+. .+... ..+... .....+++.| +...|+ +-.
T Consensus 172 ~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~~---~~p~giavdp--~~g~lyv~d~ 245 (430)
T 3tc9_A 172 STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTKG---QNCNGAETHP--INGELYFNSW 245 (430)
T ss_dssp EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEEC---SSCCCEEECT--TTCCEEEEET
T ss_pred EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeeccC---CCceEEEEeC--CCCEEEEEEC
Confidence 333334455788999999985655543 22 3433443 23221 223222 2257788888 444444 545
Q ss_pred CCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcE
Q 022870 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKY 163 (291)
Q Consensus 84 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
.++.|..++..+..... ....... ..+. .++|+|+++.+
T Consensus 246 ~~~~V~~~~~~~~~~~~--~~~~~~~----------~~P~-----------------------------gia~~pdG~~l 284 (430)
T 3tc9_A 246 NAGQVFRYDFTTQETTP--LFTIQDS----------GWEF-----------------------------HIQFHPSGNYA 284 (430)
T ss_dssp TTTEEEEEETTTTEEEE--EEECSSS----------SCCE-----------------------------EEEECTTSSEE
T ss_pred CCCEEEEEECCCCcEEE--EEEcCCC----------Ccce-----------------------------eEEEcCCCCEE
Confidence 67889999987543210 0000000 0000 06799999866
Q ss_pred EEEecCCcCeEEEEeCCC--cce--eeEecccccCCCCCCCCC-----cceeee-eEEEecCC-----CCCCceEEEeec
Q 022870 164 MAVAGEQLSEVEIWDLNT--AER--CTRLHQNSCGGSPNFSSK-----GRGMCM-AVQAYLPS-----KSQGFVNVLAGY 228 (291)
Q Consensus 164 ~~~~g~~d~~i~~wd~~~--~~~--~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~p~-----~~~g~~~l~~g~ 228 (291)
++ +-...+.|..++... ++. +..+.... ...+.... .-.... .+. ..+. ..+|. ++++=.
T Consensus 285 yv-~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~--g~~g~~dg~~~~a~~~~P~~gv~-v~~~~y~~~D~~g~-lyvaD~ 359 (430)
T 3tc9_A 285 YI-VVVNQHYILRSDYDWKTKRLTTPYIVCGQQ--GAKDWVDGVGKKARMHAPRQGTF-VKNPAYKGSSDEYD-FYFCDR 359 (430)
T ss_dssp EE-EETTTTEEEEEEEETTTTEECCCEEEEECT--TCBCCBCEEGGGCBBSSEEEEEE-EECGGGTTSSCCEE-EEEEEG
T ss_pred EE-EECCCCEEEEEeCCcccccccceEEEeccC--CCCCCCCCCCcceEeCCCcceEE-EccccccccCCCCe-EEEEEC
Confidence 65 444578899987653 221 12221100 00011000 000111 221 2211 12243 445555
Q ss_pred CCCcEEEEEccCCCCceeecccc------------------ccceeEEEeec-CCCeeEEecCCCeEEEEEcC
Q 022870 229 EDGSILVWDIRNPGIPLTAMKVH------------------LEPVLCLSIDE-SCNGGISGGADQKIVLYNLD 282 (291)
Q Consensus 229 ~dg~i~vwd~~~~~~~~~~~~~h------------------~~~v~~~~~~~-~~~~l~s~s~dg~i~vw~~~ 282 (291)
.++.|+.++. + +.. ..+.+. -.....|++++ ++.++++-...+.|+.++++
T Consensus 360 ~n~~I~~i~~-~-G~v-~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 360 ENHCIRILTP-Q-GRV-TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp GGTEEEEECT-T-SEE-EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCcEEEEECC-C-CcE-EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 6678888873 2 432 222211 12578999998 57777777777889988765
No 281
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.81 E-value=0.013 Score=50.28 Aligned_cols=203 Identities=8% Similarity=-0.102 Sum_probs=118.6
Q ss_pred cceeEEEEcCCC-CEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCC-eEEEEeCCCeEEEEECCCC
Q 022870 19 ASVTDVCFHQTK-PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLN-KVISQGRDGTVKCWDIENG 96 (291)
Q Consensus 19 ~~v~~l~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~ 96 (291)
..+..++|++.+ ..+.+-..++.|..+++........+.... .....+++.+ .+. ++++-...+.|.+.++...
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~--~~P~GlAvD~--~~~~LY~tD~~~~~I~v~~~dG~ 112 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL--DYPEGMAVDW--LGKNLYWADTGTNRIEVSKLDGQ 112 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC--SCCCEEEEET--TTTEEEEEETTTTEEEEEETTST
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCC--CCcceEEEEe--CCCEEEEEECCCCEEEEEecCCC
Confidence 356789999854 445566678899999987544333333222 2256888876 444 4455556778999988754
Q ss_pred CCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEE
Q 022870 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEI 176 (291)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~ 176 (291)
.... +.. .... .|. .++++|....++.+--...+.|..
T Consensus 113 ~~~~--l~~-~~l~----------~P~-----------------------------~iavdp~~G~lY~tD~g~~~~I~r 150 (628)
T 4a0p_A 113 HRQV--LVW-KDLD----------SPR-----------------------------ALALDPAEGFMYWTEWGGKPKIDR 150 (628)
T ss_dssp TCEE--EEC-SSCC----------CEE-----------------------------EEEEETTTTEEEEEECSSSCEEEE
T ss_pred cEEE--EEe-CCCC----------Ccc-----------------------------cEEEccCCCeEEEeCCCCCCEEEE
Confidence 2110 100 0000 000 056777666666543222567888
Q ss_pred EeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeecccccccee
Q 022870 177 WDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVL 256 (291)
Q Consensus 177 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~ 256 (291)
.++.......... . ......++ +.+++ ++ +.++-...+.|..+|+.. ... ..+...-....
T Consensus 151 ~~~dG~~~~~l~~--------~-----~~~P~Gla-lD~~~--~~-LY~aD~~~~~I~~~d~dG-~~~-~v~~~~l~~P~ 211 (628)
T 4a0p_A 151 AAMDGSERTTLVP--------N-----VGRANGLT-IDYAK--RR-LYWTDLDTNLIESSNMLG-LNR-EVIADDLPHPF 211 (628)
T ss_dssp EETTSCSCEEEEC--------S-----CSSEEEEE-EETTT--TE-EEEEETTTTEEEEEETTS-CSC-EEEEECCSCEE
T ss_pred EeCCCCceEEEEC--------C-----CCCcceEE-Ecccc--CE-EEEEECCCCEEEEEcCCC-Cce-EEeeccCCCce
Confidence 8886554332222 1 12345565 88762 33 555556778999999975 222 33433344567
Q ss_pred EEEeecCCCeeEEecCCCeEEEEEcCCCcee
Q 022870 257 CLSIDESCNGGISGGADQKIVLYNLDHSTVS 287 (291)
Q Consensus 257 ~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~ 287 (291)
+|++.. +.++++-...+.|...|..+++..
T Consensus 212 glav~~-~~ly~tD~~~~~I~~~dk~tg~~~ 241 (628)
T 4a0p_A 212 GLTQYQ-DYIYWTDWSRRSIERANKTSGQNR 241 (628)
T ss_dssp EEEEET-TEEEEEETTTTEEEEEETTTCCSC
T ss_pred EEEEEC-CEEEEecCCCCEEEEEECCCCCce
Confidence 888877 455566666789999997766543
No 282
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.77 E-value=0.018 Score=50.78 Aligned_cols=241 Identities=8% Similarity=-0.003 Sum_probs=120.1
Q ss_pred ccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEe-------e-----ecCCcceEEEEEeecCCCCeEEEEeCC
Q 022870 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW-------V-----HSAAHGIVSVATGPSIGLNKVISQGRD 85 (291)
Q Consensus 18 ~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-------~-----~~~~~~v~~~~~~~~~~~~~l~s~~~d 85 (291)
...|.++...++|. |..|+..+-|.++|..+++...... . .-....|.++...+ +| .|..|..+
T Consensus 257 ~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~--~g-~lWigt~~ 332 (781)
T 3v9f_A 257 SSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS--FN-NIWIGTWG 332 (781)
T ss_dssp CCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS--SC-CEEEEEBS
T ss_pred CceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC--CC-CEEEEecC
Confidence 35688998888884 5556664568889987665332211 0 00113589998887 64 56667766
Q ss_pred CeEEEEECCCCCCCCCC-------ccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccC--C-CCCC--
Q 022870 86 GTVKCWDIENGGLSSNP-------SLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDS--L-CDSK-- 153 (291)
Q Consensus 86 g~i~iwd~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~-- 153 (291)
+-|..|+..+.....-. ...+...... .+.............+..+..++........... . ....
T Consensus 333 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~--~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~ 410 (781)
T 3v9f_A 333 GGINFISNAPPTFHTWSYSPTQMNESSLSNKVVS--SVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVL 410 (781)
T ss_dssp SCEEEECSSCCSCEEEC----CCCSSCCSSSCEE--EEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEE
T ss_pred CeEEEeCCCCCcceeeccCccccccCCCCCcceE--EEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceE
Confidence 77888988765421100 0011111111 1111222222222222233333332221111000 0 0111
Q ss_pred -cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCc
Q 022870 154 -DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGS 232 (291)
Q Consensus 154 -~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~ 232 (291)
+...+++. +.+ |..++-+..+|.++++.. .+.. . ......+.++. ..++ | .|..|+. +-
T Consensus 411 ~i~~d~~g~-lWi--gt~~~Gl~~~~~~~~~~~-~~~~-------~--~~~~~~v~~i~-~d~~---g--~lwigt~-~G 470 (781)
T 3v9f_A 411 CSLKDSEGN-LWF--GTYLGNISYYNTRLKKFQ-IIEL-------E--KNELLDVRVFY-EDKN---K--KIWIGTH-AG 470 (781)
T ss_dssp EEEECTTSC-EEE--EETTEEEEEECSSSCEEE-ECCS-------T--TTCCCCEEEEE-ECTT---S--EEEEEET-TE
T ss_pred EEEECCCCC-EEE--EeccCCEEEEcCCCCcEE-Eecc-------C--CCCCCeEEEEE-ECCC---C--CEEEEEC-Cc
Confidence 44455654 443 333467999998776532 2221 0 11123455554 5444 4 4666666 56
Q ss_pred EEEEEccCCCCceeecccc-----ccceeEEEeecCCCeeEEecCCCeEEEEEcCCCce
Q 022870 233 ILVWDIRNPGIPLTAMKVH-----LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 233 i~vwd~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~ 286 (291)
|..||..+ ++........ ...|.++..+++|.+.+....+| +..|+.+++++
T Consensus 471 l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~ 527 (781)
T 3v9f_A 471 VFVIDLAS-KKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLV 527 (781)
T ss_dssp EEEEESSS-SSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEE
T ss_pred eEEEeCCC-CeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeE
Confidence 89999876 4332221111 35789999999988555443345 77788776654
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.75 E-value=0.0083 Score=48.90 Aligned_cols=218 Identities=11% Similarity=0.050 Sum_probs=108.9
Q ss_pred EEecCCccceeEEEEcCCCCEEEEecCC---Ce-EEEEeCCCCeE-EEEEeeecCCcceEEEEEeecCCCCeEE-EEeCC
Q 022870 12 AVLRGHRASVTDVCFHQTKPILFAGTTG---GE-LRIWDTVQHRT-VSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRD 85 (291)
Q Consensus 12 ~~l~~h~~~v~~l~~~~~~~~l~s~~~d---g~-v~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~d 85 (291)
.++.+.......++|+++|.++++.... .. +...+...+.. ...+.. . .....+++.| +...|+ +-..+
T Consensus 175 ~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~-~--~~P~giavd~--~~G~lyv~d~~~ 249 (433)
T 4hw6_A 175 DIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCN-A--RGAKTCAVHP--QNGKIYYTRYHH 249 (433)
T ss_dssp EEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEE-C--SSBCCCEECT--TTCCEEECBTTC
T ss_pred EEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccc-c--CCCCEEEEeC--CCCeEEEEECCC
Confidence 3333344557899999999854544321 12 33333222111 111221 1 2246778887 444455 44456
Q ss_pred CeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEE
Q 022870 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (291)
Q Consensus 86 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
+.|+.+|..++..... +........ + ..++|+|+++.+++
T Consensus 250 ~~V~~~d~~~g~~~~~-~~~~~~~~~----------~-----------------------------~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 250 AMISSYDPATGTLTEE-EVMMDTKGS----------N-----------------------------FHIVWHPTGDWAYI 289 (433)
T ss_dssp SEEEEECTTTCCEEEE-EEECSCCSS----------C-----------------------------EEEEECTTSSEEEE
T ss_pred CEEEEEECCCCeEEEE-EeccCCCCC----------c-----------------------------ccEEEeCCCCEEEE
Confidence 7898888875542110 000000000 0 00679999986665
Q ss_pred EecCCcCeEEEEeCCC--cce--eeEecccccCCCCCCCCC-----cceeeeeEEEecC------CCCCCceEEEeecCC
Q 022870 166 VAGEQLSEVEIWDLNT--AER--CTRLHQNSCGGSPNFSSK-----GRGMCMAVQAYLP------SKSQGFVNVLAGYED 230 (291)
Q Consensus 166 ~~g~~d~~i~~wd~~~--~~~--~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p------~~~~g~~~l~~g~~d 230 (291)
+-...+.|+.+|... +.. ...+.... ...+.... .-.....++ +.+ +..+|. ++++-..+
T Consensus 290 -ad~~~~~I~~~~~d~~~~~~~~~~~~ag~~--g~~g~~dg~~~~a~~~~P~gia-v~~n~~y~~dd~~g~-lyvaD~~n 364 (433)
T 4hw6_A 290 -IYNGKHCIYRVDYNRETGKLAVPYIVCGQH--SSPGWVDGMGTGARLWGPNQGI-FVKNEAYAGEEDEYD-FYFCDRDS 364 (433)
T ss_dssp -EETTTTEEEEEEBCTTTCCBCCCEEEEECT--TCCCCBCEEGGGSBCSSEEEEE-EEECGGGTTSSCCEE-EEEEETTT
T ss_pred -EeCCCCEEEEEeCCCCCcccCcEEEEEecC--CCCccCCCcccceEEcCCccEE-EEccccccccCCCCc-EEEEECCC
Confidence 444568899988652 221 11221000 00011100 011234454 611 112254 55666677
Q ss_pred CcEEEEEccCCCCceeecccc------------------ccceeEEEee-cCCCeeEEecCCCeEEEEEcC
Q 022870 231 GSILVWDIRNPGIPLTAMKVH------------------LEPVLCLSID-ESCNGGISGGADQKIVLYNLD 282 (291)
Q Consensus 231 g~i~vwd~~~~~~~~~~~~~h------------------~~~v~~~~~~-~~~~~l~s~s~dg~i~vw~~~ 282 (291)
+.|+.++.. +. +..+.+. -....+|+++ +++.++++=...+.|+..+++
T Consensus 365 ~~I~~~~~~--G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 365 HTVRVLTPE--GR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TEEEEECTT--SE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEECCC--CC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 889998853 42 2222211 1246789999 778777777778889988875
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.74 E-value=0.019 Score=50.44 Aligned_cols=201 Identities=12% Similarity=-0.009 Sum_probs=107.8
Q ss_pred eEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEE-EEeCCCeEEEEECCCCCCCC
Q 022870 22 TDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLSS 100 (291)
Q Consensus 22 ~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~ 100 (291)
+|.+..+.. +|+.+. ...|+..++...+....+.. . ..+..|+|.+ ....|+ +-...+.|+.+++.......
T Consensus 388 ~C~~~~~~p-~Ll~an-~~~Ir~i~l~~~~~~~l~~~-~--~~~~gl~~d~--~~~~lY~sD~~~~~I~~~~l~g~~~~~ 460 (791)
T 3m0c_C 388 ACKAVGSIA-YLFFTN-RHEVRKMTLDRSEYTSLIPN-L--RNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVS 460 (791)
T ss_dssp CCEETTSCC-EEEEEC-BSSEEEECTTSCCCEEEECS-C--SSEEEEEEET--TTTEEEEEETTTTEEEEEEC-------
T ss_pred eeeeccccc-cccccc-ccceeEeeccCCcceeeecC-C--CceEEEeecc--cCCeeEEeeccceeEEEEeccCCCCCc
Confidence 344443333 344333 35688888876554443333 2 3378999988 445544 55556788888887532100
Q ss_pred CCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCC
Q 022870 101 NPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLN 180 (291)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~ 180 (291)
.....+.. . +..-..+++.+.+.++++ +-...+.|.+.++.
T Consensus 461 ~~~~vi~~---------~-----------------------------l~~P~GLAvD~~~~~LY~-tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 461 SYDTVISR---------D-----------------------------IQAPDGLAVDWIHSNIYW-TDSVLGTVSVADTK 501 (791)
T ss_dssp -CEEEECS---------S-----------------------------CSCCCEEEEETTTTEEEE-EETTTTEEEEEETT
T ss_pred ceeEEEec---------C-----------------------------CCCcceeeeeecCCcEEE-EecCCCeEEEEeCC
Confidence 00000000 0 000001667777777766 44457899999998
Q ss_pred CcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEee-cCCCcEEEEEccCCCCceeeccccccceeEEE
Q 022870 181 TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG-YEDGSILVWDIRNPGIPLTAMKVHLEPVLCLS 259 (291)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g-~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~ 259 (291)
.......+.. . ......++ +.|.. |. ++++- +..+.|.+.++.. ......+...-...++|+
T Consensus 502 G~~~~~l~~~--------~----l~~P~gIa-VDp~~--g~-LYwtD~g~~~~I~~~~~dG-~~~~~lv~~~l~~P~GLa 564 (791)
T 3m0c_C 502 GVKRKTLFRE--------N----GSKPRAIV-VDPVH--GF-MYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGIT 564 (791)
T ss_dssp SSSEEEEEEC--------T----TCCEEEEE-EETTT--TE-EEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEE
T ss_pred CCeEEEEEeC--------C----CCCcceEE-EecCC--CC-EEEecCCCCCeEEEEecCC-CceEEEEeCCCCCceEEE
Confidence 6543333321 1 12245565 87762 43 33443 3337899999874 332222333335789999
Q ss_pred eecCCCeeE-EecCCCeEEEEEcCCCc
Q 022870 260 IDESCNGGI-SGGADQKIVLYNLDHST 285 (291)
Q Consensus 260 ~~~~~~~l~-s~s~dg~i~vw~~~~~~ 285 (291)
+++....|+ +=...+.|...+++...
T Consensus 565 vD~~~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 565 LDLLSGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred EecCCCeEEEEeCCCCcEEEEecCCCc
Confidence 996555554 44556789999886543
No 285
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.69 E-value=0.01 Score=45.92 Aligned_cols=214 Identities=9% Similarity=0.103 Sum_probs=112.7
Q ss_pred EecCCccceeEEEEcC-CCCEEEEecCCCeEEEEeCCCCeEEEE-Eee----ecCCcceEEEEE---eecCCCCeEEEEe
Q 022870 13 VLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSS-SWV----HSAAHGIVSVAT---GPSIGLNKVISQG 83 (291)
Q Consensus 13 ~l~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~----~~~~~~v~~~~~---~~~~~~~~l~s~~ 83 (291)
.+++..----+.+|++ ++.++++.-..++|..||...+..... +.. ......+..|.| .| ++.++++..
T Consensus 7 ~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~--~grL~vv~~ 84 (334)
T 2p9w_A 7 DVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN--SKRLFAVMK 84 (334)
T ss_dssp EECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS--CCEEEEEEE
T ss_pred EecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC--CCcEEEEEc
Confidence 3444444456789988 454455555899999999875543332 221 111123689999 57 755665433
Q ss_pred -------------CCCeEEEEECC---CCCCCCCCcccccc-----------ceEEEEEeecccCccceeccCCCCceee
Q 022870 84 -------------RDGTVKCWDIE---NGGLSSNPSLTIKT-----------NSYHFCKLSLVKEPYANAKQANEPKDCY 136 (291)
Q Consensus 84 -------------~dg~i~iwd~~---~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (291)
.+..|..||+. +++... ...+.. .......
T Consensus 85 ~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~--~~dL~~~~~~~~~~~g~~~~~~nD--------------------- 141 (334)
T 2p9w_A 85 NAKSFNFADQSSHGASSFHSFNLPLSENSKPVW--SVNFEKVQDEFEKKAGKRPFGVVQ--------------------- 141 (334)
T ss_dssp ETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSE--EEESHHHHHHHHHHHSSCCEEEEE---------------------
T ss_pred ccccccccccccCCCCEEEEEcCCcCCCCCEEE--EecCccccccccccccccccCCce---------------------
Confidence 26789999998 665433 111110 0000000
Q ss_pred ecccCccccccCCCCCCcccCCCCCcEEEEecCCc-CeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecC
Q 022870 137 EREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL-SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP 215 (291)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d-~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 215 (291)
++..++|+-++ +++.. +.|...+.........+... . ......-...+. +.|
T Consensus 142 -----------------vavD~~GnaYV--t~s~~~~~I~rV~pdG~~~~~~~~~~------~-~~~~~~G~nGIv-~~p 194 (334)
T 2p9w_A 142 -----------------SAQDRDGNSYV--AFALGMPAIARVSADGKTVSTFAWES------G-NGGQRPGYSGIT-FDP 194 (334)
T ss_dssp -----------------EEECTTSCEEE--EEEESSCEEEEECTTSCCEEEEEECC------C-CSSSCCSCSEEE-EET
T ss_pred -----------------eEECCCCCEEE--eCCCCCCeEEEEeCCCCEEeeeeecC------C-CcccccCcceEE-EeC
Confidence 55778886555 44445 66777776644222111110 0 000111234454 999
Q ss_pred CCCCCceEEEeecCCCcEEEEEccCCCC-ceeecc--cc---ccceeEE-EeecCCCe-eEEecCCCeEEEEEcCC
Q 022870 216 SKSQGFVNVLAGYEDGSILVWDIRNPGI-PLTAMK--VH---LEPVLCL-SIDESCNG-GISGGADQKIVLYNLDH 283 (291)
Q Consensus 216 ~~~~g~~~l~~g~~dg~i~vwd~~~~~~-~~~~~~--~h---~~~v~~~-~~~~~~~~-l~s~s~dg~i~vw~~~~ 283 (291)
+ |. .|++....|.|..+|++++.. ++. +. +. -.....| ....+|+. |++.+..+.+.+.+-+.
T Consensus 195 d---g~-~Liv~~~~g~L~~fD~~~pv~~~v~-~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 195 H---SN-KLIAFGGPRALTAFDVSKPYAWPEP-VKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp T---TT-EEEEESSSSSEEEEECSSSSCCCEE-CEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred C---CC-EEEEEcCCCeEEEEcCCCCcceeec-ccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 8 55 555554499999999985322 021 11 21 1123343 44456666 55555666666655443
No 286
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.68 E-value=0.025 Score=49.94 Aligned_cols=243 Identities=10% Similarity=-0.005 Sum_probs=122.9
Q ss_pred ccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEe-------eecCCcceEEEEEeecCCCCeEEEEeCCCeEEE
Q 022870 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW-------VHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (291)
Q Consensus 18 ~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~i 90 (291)
...|.++...++|. |-.|+.++-|..++..++....... ..-....|.++...+ ++ .|..|+.++-|..
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~--~g-~lWigt~~~Gl~~ 387 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG--QG-KLWIGTDGGGINV 387 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT--TS-CEEEEEBSSCEEE
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC--CC-CEEEEeCCCcEEE
Confidence 45799999998885 6667766778899876554322111 000113488888877 64 5666676666888
Q ss_pred EECCCCCCCCCC-ccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccC--CCCCC---cccCCCCCcEE
Q 022870 91 WDIENGGLSSNP-SLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDS--LCDSK---DDVPAEGPKYM 164 (291)
Q Consensus 91 wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~ 164 (291)
||..+.....-. ...+...... .+...................++........... ..... +...+++. +.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~v~--~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lw 464 (781)
T 3v9f_A 388 FENGKRVAIYNKENRELLSNSVL--CSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IW 464 (781)
T ss_dssp EETTEEEEECC-----CCCSBEE--EEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EE
T ss_pred EECCCCeEEEccCCCCCCCcceE--EEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EE
Confidence 998765322100 0001111111 1111111122222211222223322222111111 01111 44455554 44
Q ss_pred EEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCc
Q 022870 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (291)
Q Consensus 165 ~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~ 244 (291)
+.+ . +-+..||..+++....... .........+.++. ..++ | .|..|+.++-|..||..+ .+
T Consensus 465 igt--~-~Gl~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~i~-~d~~---g--~lWigt~~~Gl~~~~~~~-~~- 526 (781)
T 3v9f_A 465 IGT--H-AGVFVIDLASKKVIHHYDT-------SNSQLLENFVRSIA-QDSE---G--RFWIGTFGGGVGIYTPDM-QL- 526 (781)
T ss_dssp EEE--T-TEEEEEESSSSSCCEEECT-------TTSSCSCSCEEEEE-ECTT---C--CEEEEESSSCEEEECTTC-CE-
T ss_pred EEE--C-CceEEEeCCCCeEEecccC-------cccccccceeEEEE-EcCC---C--CEEEEEcCCCEEEEeCCC-Ce-
Confidence 322 2 4589999887654332221 00001123455554 5554 4 366666655588888765 32
Q ss_pred eeeccc----cccceeEEEeecCCCeeEEecCCCeEEEEEcCCCce
Q 022870 245 LTAMKV----HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 245 ~~~~~~----h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~ 286 (291)
...+.. ....|.++..+++|.+.++.. +|.|..||..++++
T Consensus 527 ~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~ 571 (781)
T 3v9f_A 527 VRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDY 571 (781)
T ss_dssp EEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCC
T ss_pred EEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcE
Confidence 222221 235789999999988655544 77658888877654
No 287
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.68 E-value=0.0011 Score=57.47 Aligned_cols=218 Identities=7% Similarity=-0.078 Sum_probs=103.3
Q ss_pred cceeEEEEcCCCCEEEEe-cCCCeEEEEeCCC----CeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEEC
Q 022870 19 ASVTDVCFHQTKPILFAG-TTGGELRIWDTVQ----HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (291)
Q Consensus 19 ~~v~~l~~~~~~~~l~s~-~~dg~v~iwd~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 93 (291)
..+..++|++.+..|+.+ ...+.|+.+++.. ......+.... .....|++.+. .++++++-...+.|.++++
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~--~~P~glavD~~-~g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDWI-HSNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC----CCCEECCCS-SSBCEECCTTTSCEEEEBS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCC--CCcceEEEEee-CCcEEEEeccCCeEEEEec
Confidence 345678998865555544 4567899998764 12111111111 12456787751 3345555556788999998
Q ss_pred CCCCCCCCCccccccceEEEEEeecccCccceeccCC--CCceeeecccCcc--cc-ccCCCCCCcccCCCCCcEEEEec
Q 022870 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQAN--EPKDCYEREVGET--VD-TDSLCDSKDDVPAEGPKYMAVAG 168 (291)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~g 168 (291)
....... +............+.+...... ....+ ..+..+++..... +. ..+..-..++++|++..++++-
T Consensus 483 dg~~~~~--l~~~~~~~P~giavDp~~g~ly-~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD- 558 (699)
T 1n7d_A 483 KGVKRKT--LFREQGSKPRAIVVDPVHGFMY-WTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVD- 558 (699)
T ss_dssp SSCCEEE--ECCCSSCCCCCEECCSSSSCCE-ECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEE-
T ss_pred CCCceEE--EEeCCCCCcceEEEccCCCcEE-EcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEe-
Confidence 7543211 1111001111111111111111 11111 1222222222111 11 1111122299999887777644
Q ss_pred CCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeec
Q 022870 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 248 (291)
Q Consensus 169 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~ 248 (291)
...+.|..+|+..... ..+.. ... .......+. +.. +. ++++....+.|..+|..+ ++.+..+
T Consensus 559 ~~~~~I~~~d~dG~~~-~~~~~-------~~~--~~~~P~gla-vd~----~~-lywtd~~~~~V~~~d~~~-G~~~~~i 621 (699)
T 1n7d_A 559 SKLHSISSIDVNGGNR-KTILE-------DEK--RLAHPFSLA-VFE----DK-VFWTDIINEAIFSANRLT-GSDVNLL 621 (699)
T ss_dssp TTTTEEEEECSSSSCC-EEECC-------CSS--SCSSCCCCE-EET----TE-EEEECSTTTCEEEEETTT-EEEEECC
T ss_pred cCCCeEEEEccCCCce-EEEEe-------cCC--cCCCceEeE-EEC----CE-EEEEeCCCCeEEEEEccC-CCceEEe
Confidence 4468899999975433 22221 000 011122333 332 22 666777788999999876 5555555
Q ss_pred cccccceeEEEe
Q 022870 249 KVHLEPVLCLSI 260 (291)
Q Consensus 249 ~~h~~~v~~~~~ 260 (291)
......+++|++
T Consensus 622 ~~~~~~P~~i~v 633 (699)
T 1n7d_A 622 AENLLSPEDMVL 633 (699)
T ss_dssp CTTCSSCCCCCB
T ss_pred ecCCCCCcEEEE
Confidence 432333444544
No 288
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.61 E-value=0.026 Score=48.25 Aligned_cols=207 Identities=7% Similarity=-0.077 Sum_probs=113.6
Q ss_pred cceeEEEEcCCCCEE-EEecCCCeEEEEeCCCCeE-EEEEeeecCCcceEEEEEeecCCCCeEE-EEeCCCeEEEEECCC
Q 022870 19 ASVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRT-VSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIEN 95 (291)
Q Consensus 19 ~~v~~l~~~~~~~~l-~s~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~ 95 (291)
.....++|++.+..| .+-...+.|..++++.... ...+.... .....+++.+ .++.|+ +-...+.|.+.++..
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~--~~P~GlAvD~--~~~~ly~~d~~~~~I~v~~~dG 115 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL--LSPDGLACDW--LGEKLYWTDSETNRIEVSNLDG 115 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSC--SCEEEEEEET--TTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCC--CCcCeEEEEe--cCCEEEEEeCCCCEEEEEECCC
Confidence 346789999855444 4555678898898865432 22222221 2378999988 555555 555678999999875
Q ss_pred CCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEE
Q 022870 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVE 175 (291)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~ 175 (291)
..... +.. . .+..-..++++|.+..++.+--...+.|.
T Consensus 116 ~~~~~--l~~-~---------------------------------------~l~~P~~Iavdp~~g~ly~tD~g~~~~I~ 153 (619)
T 3s94_A 116 SLRKV--LFW-Q---------------------------------------ELDQPRAIALDPSSGFMYWTDWGEVPKIE 153 (619)
T ss_dssp CSCEE--EEC-S---------------------------------------SCSCCCCEEEETTTTEEEEEECSSSCEEE
T ss_pred CCEEE--EEe-C---------------------------------------CCCCCceEEEecCCCeEEEeccCCCCEEE
Confidence 43210 000 0 00000116788876666654322246777
Q ss_pred EEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccce
Q 022870 176 IWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV 255 (291)
Q Consensus 176 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v 255 (291)
..++........... .-.....++ +.++. ++ +.++-...+.|..+|+.. ........+.....
T Consensus 154 r~~~dG~~~~~l~~~------------~~~~P~Gla-ld~~~--~~-LY~aD~~~~~I~~~~~dG-~~~~~~~~~~~~~P 216 (619)
T 3s94_A 154 RAGMDGSSRFIIINS------------EIYWPNGLT-LDYEE--QK-LYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHP 216 (619)
T ss_dssp EEETTSCSCEEEECS------------SCSSEEEEE-EETTT--TE-EEEEETTTCCEEEESSSC-CEEC---------C
T ss_pred EEECCCCceEEEEeC------------CCCCCcEEE-EEccC--CE-EEEEeCCCCeEEEecCCC-CccEEEEeCCCCCc
Confidence 777764333222221 112345565 88762 33 555556678899999874 22222222223344
Q ss_pred eEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 256 LCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 256 ~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
.+|++.++ .+.++-...+.|...|..+++....
T Consensus 217 ~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~ 249 (619)
T 3s94_A 217 FALTLFED-ILYWTDWSTHSILACNKYTGEGLRE 249 (619)
T ss_dssp CCEEESSS-EEEEECTTTCSEEEEESSSCCCCEE
T ss_pred eEEEEeCC-EEEEecCCCCEEEEEECCCCcccEE
Confidence 67888777 4556666678899999888765443
No 289
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.59 E-value=0.019 Score=46.24 Aligned_cols=191 Identities=13% Similarity=0.035 Sum_probs=105.1
Q ss_pred EEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEE-EeCCCeEEEEECCCCCCCCCCccccccce
Q 022870 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVIS-QGRDGTVKCWDIENGGLSSNPSLTIKTNS 110 (291)
Q Consensus 32 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 110 (291)
+|+.+. ...|+..++........+.. . ..+..++|.+ .+..|+. -...+.|+.+++............+...
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~-~--~~~~~l~~d~--~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~- 157 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPN-L--RNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD- 157 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECS-C--SCEEEEEEET--TTTEEEEEETTTTEEEEEEC------CCCEEEECSS-
T ss_pred eeEEec-cceeEEEccCCcceeEeccc-c--CcceEEeeee--ccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC-
Confidence 444433 36899999876654444332 2 3488999998 5555554 4456788888886532100000000000
Q ss_pred EEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecc
Q 022870 111 YHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQ 190 (291)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~ 190 (291)
...+. .+++.+.+..++. +-...+.|.+.|+........+..
T Consensus 158 --------~~~p~-----------------------------glavD~~~~~lY~-~d~~~~~I~~~~~~g~~~~~l~~~ 199 (400)
T 3p5b_L 158 --------IQAPD-----------------------------GLAVDWIHSNIYW-TDSVLGTVSVADTKGVKRKTLFRE 199 (400)
T ss_dssp --------CSCEE-----------------------------EEEEETTTTEEEE-EETTTTEEEEECTTTCSEEEEEEC
T ss_pred --------CCCcc-----------------------------cEEEEecCCceEE-EECCCCeEEEEeCCCCceEEEEeC
Confidence 00000 0556665556665 344468899999876544333331
Q ss_pred cccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEee-cCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeE-
Q 022870 191 NSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG-YEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI- 268 (291)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g-~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~- 268 (291)
. ......++ +.|.. |. ++++- +..+.|+..++.. ......+...-...+.|++++++..|.
T Consensus 200 -------~-----~~~P~~ia-vdp~~--g~-ly~td~~~~~~I~~~~~dG-~~~~~~~~~~l~~P~glavd~~~~~lY~ 262 (400)
T 3p5b_L 200 -------N-----GSKPRAIV-VDPVH--GF-MYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYW 262 (400)
T ss_dssp -------S-----SCCEEEEE-EETTT--TE-EEEEECSSSCCEEEEETTS-CSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred -------C-----CCCcceEE-Eeccc--Ce-EEEEeCCCCCEEEEEeCCC-CccEEEEECCCCceEEEEEEeCCCEEEE
Confidence 1 11245565 88762 43 33343 3357899999874 222222233335789999997665554
Q ss_pred EecCCCeEEEEEcCCC
Q 022870 269 SGGADQKIVLYNLDHS 284 (291)
Q Consensus 269 s~s~dg~i~vw~~~~~ 284 (291)
+-+..+.|...|++..
T Consensus 263 aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 263 VDSKLHSISSIDVNGG 278 (400)
T ss_dssp EETTTTEEEEEETTSC
T ss_pred EECCCCEEEEEeCCCC
Confidence 4455678999998754
No 290
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.58 E-value=0.015 Score=44.82 Aligned_cols=247 Identities=11% Similarity=0.092 Sum_probs=137.3
Q ss_pred EEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCcc
Q 022870 25 CFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSL 104 (291)
Q Consensus 25 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 104 (291)
-.+|..+.+|.-. ..++.|+|+++.+.++..... ++|.-=.|-. + +.|+-... ..|+-|+++...... .++
T Consensus 73 IMnP~~~ViALra-g~~LQiFnletK~klks~~~~---e~VvfWkWis--~-~~L~lVT~-taVyHWs~~~~s~P~-kvF 143 (365)
T 2xzh_A 73 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT---DDVTFWKWIS--L-NTVALVTD-NAVYHWSMEGESQPV-KMF 143 (365)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS---SCEEEEEECS--S-SEEEEEES-SEEEEEESSTTCCCE-EEE
T ss_pred eeCCCccEEEEec-CCeEEEechHHhhhhcceecC---CccEEEEecC--C-CeEEEEcC-CcEEEEcccCCCCCc-eee
Confidence 3477777776654 578999999999988887765 4487777876 4 66666554 589999998633211 011
Q ss_pred ----ccccceEEEEEeecccCccceecc---CCC-CceeeecccCccccccCCCCCC--cccC----CCCCcEEEEe--c
Q 022870 105 ----TIKTNSYHFCKLSLVKEPYANAKQ---ANE-PKDCYEREVGETVDTDSLCDSK--DDVP----AEGPKYMAVA--G 168 (291)
Q Consensus 105 ----~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~--g 168 (291)
.+.......-..+........... .+. .+.+.-....+.....+++|.. ..+- +....+++.+ +
T Consensus 144 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~ 223 (365)
T 2xzh_A 144 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRG 223 (365)
T ss_dssp ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEE
T ss_pred ecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEec
Confidence 111122222222222222221111 110 1111222333444455566655 2222 2222333321 2
Q ss_pred CCcCeEEEEeCCCc-ceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceee
Q 022870 169 EQLSEVEIWDLNTA-ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (291)
Q Consensus 169 ~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~ 247 (291)
...+.+++-++... .....+......-+ -.++.......++. .++.. | .+..-+.-|.|++||+++ +.++..
T Consensus 224 ~~g~kLhIiEi~~~~~~~~~f~kk~vdi~-fppea~~DFPVamq-vs~ky--g--viyviTK~G~ihlyDleT-gt~i~~ 296 (365)
T 2xzh_A 224 QAGGKLHIIEVGTPPTGNQPFPKKAVDVF-FPPEAQNDFPVAMQ-ISEKH--D--VVFLITKYGYIHLYDLET-GTCIYM 296 (365)
T ss_dssp TTEEEEEEEECSSCCTTCCCCCCEEEEEC-CCTTCTTCCEEEEE-EETTT--T--EEEEEETTSEEEEEETTT-CCEEEE
T ss_pred CCCcEEEEEEcCCCCCCCCCcccccceee-CCccccCCceEEEE-ecccC--C--EEEEEeCCcEEEEEEccc-CcEEEE
Confidence 22368888888443 00011110000000 01122456677776 77652 3 788888999999999999 888888
Q ss_pred ccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCcee
Q 022870 248 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVS 287 (291)
Q Consensus 248 ~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~ 287 (291)
-+-..++|..-+-+.+..-++....+|.|.--.++..+++
T Consensus 297 nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~iv 336 (365)
T 2xzh_A 297 NRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 336 (365)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTHH
T ss_pred eccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccEe
Confidence 7776778877676655555677778898888887776654
No 291
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.56 E-value=0.017 Score=44.83 Aligned_cols=189 Identities=14% Similarity=0.077 Sum_probs=104.7
Q ss_pred EEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEE-EEeCCCeEEEEECCCCCCCCCCccccccce
Q 022870 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLSSNPSLTIKTNS 110 (291)
Q Consensus 32 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 110 (291)
+|+.+.. ..|+..|+...+....+... .....++|.+ .++.|+ +-..++.|..+++............+..
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~~---~~p~g~~~d~--~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~-- 74 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIPNL---RNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-- 74 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEECSC---SSEEEEEEET--TTTEEEEEETTTTEEEEEEC--------CEEEECS--
T ss_pred EEEEECC-CeEEEEECCCcceEehhcCC---CceEEEEEEe--CCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeC--
Confidence 3444333 46899998877655544432 3378999998 555555 5455688999988752100000000000
Q ss_pred EEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecc
Q 022870 111 YHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQ 190 (291)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~ 190 (291)
....+ ..+++++.+..++++ -...+.|.++|+........+..
T Consensus 75 -------~~~~p-----------------------------~glavd~~~~~ly~~-d~~~~~I~~~~~~g~~~~~~~~~ 117 (316)
T 1ijq_A 75 -------DIQAP-----------------------------DGLAVDWIHSNIYWT-DSVLGTVSVADTKGVKRKTLFRE 117 (316)
T ss_dssp -------SCSCC-----------------------------CEEEEETTTTEEEEE-ETTTTEEEEEETTSSSEEEEEEC
T ss_pred -------CCCCc-----------------------------CEEEEeecCCeEEEE-ECCCCEEEEEeCCCCceEEEEEC
Confidence 00000 005677666666653 34468899999875443322221
Q ss_pred cccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCC-CcEEEEEccCCCCceeec-cccccceeEEEeecCCCee-
Q 022870 191 NSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED-GSILVWDIRNPGIPLTAM-KVHLEPVLCLSIDESCNGG- 267 (291)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d-g~i~vwd~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l- 267 (291)
. ......++ +.|.+ |. ++++.... +.|..+++. +.....+ ...-...+.|++++++..|
T Consensus 118 --------~----~~~P~~ia-vdp~~--g~-ly~~d~~~~~~I~~~~~d--G~~~~~~~~~~~~~P~gla~d~~~~~lY 179 (316)
T 1ijq_A 118 --------N----GSKPRAIV-VDPVH--GF-MYWTDWGTPAKIKKGGLN--GVDIYSLVTENIQWPNGITLDLLSGRLY 179 (316)
T ss_dssp --------T----TCCEEEEE-EETTT--TE-EEEEECSSSCEEEEEETT--SCCEEEEECSSCSCEEEEEEETTTTEEE
T ss_pred --------C----CCCcceEE-eCCCC--CE-EEEEccCCCCeEEEEcCC--CCCeEEEEECCCCCceEEEEeccCCEEE
Confidence 1 12345565 88752 43 44444333 789999886 3333333 2223567899999865555
Q ss_pred EEecCCCeEEEEEcCC
Q 022870 268 ISGGADQKIVLYNLDH 283 (291)
Q Consensus 268 ~s~s~dg~i~vw~~~~ 283 (291)
++-+..+.|..+|++.
T Consensus 180 ~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 180 WVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEETTTTEEEEEETTS
T ss_pred EEECCCCeEEEEecCC
Confidence 4555667999999875
No 292
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.52 E-value=0.0077 Score=46.61 Aligned_cols=101 Identities=10% Similarity=0.053 Sum_probs=63.9
Q ss_pred cCeEEEEeCC---CcceeeEecccccCCCCCCCCC-------cceeeeeEEEecCCCCCCceEEEeecCC-CcEEEEEcc
Q 022870 171 LSEVEIWDLN---TAERCTRLHQNSCGGSPNFSSK-------GRGMCMAVQAYLPSKSQGFVNVLAGYED-GSILVWDIR 239 (291)
Q Consensus 171 d~~i~~wd~~---~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~p~~~~g~~~l~~g~~d-g~i~vwd~~ 239 (291)
+..+..||+. +++.+...... ..... ....+..+. ..++ |. ..++++.. +.|...+..
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~------~~~~~~~~~~g~~~~~~nDva-vD~~---Gn-aYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFE------KVQDEFEKKAGKRPFGVVQSA-QDRD---GN-SYVAFALGMPAIARVSAD 167 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESH------HHHHHHHHHHSSCCEEEEEEE-ECTT---SC-EEEEEEESSCEEEEECTT
T ss_pred CCEEEEEcCCcCCCCCEEEEecCc------cccccccccccccccCCceeE-ECCC---CC-EEEeCCCCCCeEEEEeCC
Confidence 5789999999 77766544311 00000 123466676 7777 44 66666666 777777665
Q ss_pred CCCCceeeccc------cccceeEEEeecCCCeeEEecCCCeEEEEEcCCC
Q 022870 240 NPGIPLTAMKV------HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 240 ~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~ 284 (291)
++.+..+.. .....+.|+++|++..|+.....|.+..+|+++.
T Consensus 168 --G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 168 --GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp --SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred --CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 333332211 1123679999999988887766999999998743
No 293
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.52 E-value=0.0065 Score=52.44 Aligned_cols=74 Identities=12% Similarity=0.135 Sum_probs=49.3
Q ss_pred eEEEEcCCCCEEEEecC-CCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEe-CC-----CeEEEEECC
Q 022870 22 TDVCFHQTKPILFAGTT-GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG-RD-----GTVKCWDIE 94 (291)
Q Consensus 22 ~~l~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~d-----g~i~iwd~~ 94 (291)
.++++..++.+++.|+. +..+.+||..+.+-...-..+.. ..-.+++..+ ++..++.|+ .+ ..+.+||..
T Consensus 246 ~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~-R~~~s~~~~~--dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 246 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVA-RGYQSSATMS--DGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp CEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSC-CSSCEEEECT--TSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred ccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcc-ccccceEEec--CCeEEEEeCcccCCcccccceEeCCC
Confidence 34677789999999984 56899999887654432222211 1123555666 778888888 34 579999998
Q ss_pred CCCC
Q 022870 95 NGGL 98 (291)
Q Consensus 95 ~~~~ 98 (291)
+.+.
T Consensus 323 t~~W 326 (656)
T 1k3i_A 323 SKTW 326 (656)
T ss_dssp TTEE
T ss_pred CCcc
Confidence 7653
No 294
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.41 E-value=0.022 Score=44.52 Aligned_cols=110 Identities=11% Similarity=0.201 Sum_probs=65.7
Q ss_pred EEEEecCC--cCeEEEEeC--CCcceeeEecccccCCCCCCC-CCcceeeeeEEEe-cCCCCCCceEEEeecCCCcEEEE
Q 022870 163 YMAVAGEQ--LSEVEIWDL--NTAERCTRLHQNSCGGSPNFS-SKGRGMCMAVQAY-LPSKSQGFVNVLAGYEDGSILVW 236 (291)
Q Consensus 163 ~~~~~g~~--d~~i~~wd~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~p~~~~g~~~l~~g~~dg~i~vw 236 (291)
+++++... +++|.+|++ .++ .+..+... .+. ......++.++.| +|. .++.++++...+|.+..|
T Consensus 88 la~as~R~~~~n~l~vf~iDp~~~-~l~~i~~~------~~pv~t~~~~pyGlcly~~~~--~g~~yafV~~k~G~~~q~ 158 (355)
T 3amr_A 88 IAAASNRSEGKNTIEIYAIDGKNG-TLQSMTDP------DHPIATAINEVYGFTLYHSQK--TGKYYAMVTGKEGEFEQY 158 (355)
T ss_dssp EEEEEECSTTCCEEEEEEECTTTC-CEEECSCT------TSCEECCCSSCCCEEEEECTT--TCCEEEEEECSSSEEEEE
T ss_pred EEEEeCCCCCCCeEEEEEECCCCC-ceeecccc------ccCcCCCCCCeeEEEEEecCC--CCcEEEEEECCCCeEEEE
Confidence 44445554 588999976 333 34444210 000 0000223334313 453 254478888889999999
Q ss_pred EccCC------CCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcC
Q 022870 237 DIRNP------GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (291)
Q Consensus 237 d~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~ 282 (291)
++... .+.++++.. .+.+-.+..++....|..+-+|.-|..++.+
T Consensus 159 ~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 159 ELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred EEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 98421 245566664 4578899999888889999888666666644
No 295
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.40 E-value=0.029 Score=43.63 Aligned_cols=181 Identities=14% Similarity=0.029 Sum_probs=101.5
Q ss_pred CCeEEEEeCCCCe--EEEEEeeecCCcceEEEEEeecCCCCeEE-EEeCCCeEEEEECCCCCCCCCCccccccceEEEEE
Q 022870 39 GGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCK 115 (291)
Q Consensus 39 dg~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 115 (291)
...|+..++.... ....+... .....+.|.+ .+..|+ +-...+.|..+++....... .+.. ..
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~---~~~~~ld~d~--~~~~lyw~D~~~~~I~r~~~~g~~~~~-~~~~--------~~ 77 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGL---EDAAAVDFVF--SHGLIYWSDVSEEAIKRTEFNKTESVQ-NVVV--------SG 77 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEE---EEEEEEEEEG--GGTEEEEEETTTTEEEEEETTSSSCCC-EEEE--------EC
T ss_pred cCeEEEEECCCCceEEEEEecCC---CccEEEEEEe--CCCEEEEEECCCCcEEEEEccCCCceE-EEEc--------CC
Confidence 4679999987653 22222222 2367999998 445444 55567889999887653211 0000 00
Q ss_pred eecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCC
Q 022870 116 LSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGG 195 (291)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~ 195 (291)
...+. .+++.+.+..++.+ -...+.|.++++........+..
T Consensus 78 ---l~~p~-----------------------------glavd~~~g~ly~~-d~~~~~I~~~~~dG~~~~~l~~~----- 119 (318)
T 3sov_A 78 ---LLSPD-----------------------------GLACDWLGEKLYWT-DSETNRIEVSNLDGSLRKVLFWQ----- 119 (318)
T ss_dssp ---CSCCC-----------------------------EEEEETTTTEEEEE-ETTTTEEEEEETTSCSCEEEECS-----
T ss_pred ---CCCcc-----------------------------EEEEEcCCCeEEEE-ECCCCEEEEEECCCCcEEEEEeC-----
Confidence 00000 05566666666653 34467899999875433222221
Q ss_pred CCCCCCCcceeeeeEEEecCCCCCCceEEEee-cCCCcEEEEEccCCCCceeec-cccccceeEEEeecCCCee-EEecC
Q 022870 196 SPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG-YEDGSILVWDIRNPGIPLTAM-KVHLEPVLCLSIDESCNGG-ISGGA 272 (291)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g-~~dg~i~vwd~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l-~s~s~ 272 (291)
. ......++ +.|.+ |. ++++- +..+.|+..++.. .....+ ...-...+.|++++++..| ++=+.
T Consensus 120 --~-----~~~P~gia-vdp~~--g~-ly~td~~~~~~I~r~~~dG--~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~ 186 (318)
T 3sov_A 120 --E-----LDQPRAIA-LDPSS--GF-MYWTDWGEVPKIERAGMDG--SSRFIIINSEIYWPNGLTLDYEEQKLYWADAK 186 (318)
T ss_dssp --S-----CSSEEEEE-EEGGG--TE-EEEEECSSSCEEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred --C-----CCCccEEE-EeCCC--CE-EEEEecCCCCEEEEEEcCC--CCeEEEEECCCCCccEEEEeccCCEEEEEECC
Confidence 1 12234555 77752 43 33333 2468899998873 333332 2223467899999855544 55556
Q ss_pred CCeEEEEEcCCC
Q 022870 273 DQKIVLYNLDHS 284 (291)
Q Consensus 273 dg~i~vw~~~~~ 284 (291)
.+.|..++++..
T Consensus 187 ~~~I~~~d~dG~ 198 (318)
T 3sov_A 187 LNFIHKSNLDGT 198 (318)
T ss_dssp TTEEEEEETTSC
T ss_pred CCEEEEEcCCCC
Confidence 789999998753
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.26 E-value=0.06 Score=44.41 Aligned_cols=224 Identities=10% Similarity=0.006 Sum_probs=113.5
Q ss_pred ceeEEEE-------cCCCCEEEEecCCC-------eEEEEeCCC-CeEE-----EEEeeecCCcceEEEEEeecCCCCe-
Q 022870 20 SVTDVCF-------HQTKPILFAGTTGG-------ELRIWDTVQ-HRTV-----SSSWVHSAAHGIVSVATGPSIGLNK- 78 (291)
Q Consensus 20 ~v~~l~~-------~~~~~~l~s~~~dg-------~v~iwd~~~-~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~- 78 (291)
....++| +++|..|+.+...+ .|.+.+... +... ..+....+ ...++++| ++..
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~---p~giavdp--~~g~L 261 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQ---CNGATIHP--INGEL 261 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESC---CCCEEECT--TTCCE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCC---ceEEEEcC--CCCeE
Confidence 5788999 99998666655443 266665333 2221 22322222 46778888 5454
Q ss_pred EEEEeCCCeEEEEECC-------CCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCC
Q 022870 79 VISQGRDGTVKCWDIE-------NGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCD 151 (291)
Q Consensus 79 l~s~~~dg~i~iwd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (291)
+++-..++.|..+|+. ++.. ..+............ +.... ..
T Consensus 262 Yvtd~~~g~V~r~d~~~~~~~~~tg~~-~tp~~~~~~g~~~~l-~~~~~-----------------------------~~ 310 (496)
T 3kya_A 262 YFNSYEKGQVFRLDLVDYFKTIKNGGS-WDPIVKNNPNTFKQL-FTIAD-----------------------------PS 310 (496)
T ss_dssp EEEETTTTEEEEECHHHHHHHHHTTCC-CCCBGGGCTTTEEEE-EECSS-----------------------------SS
T ss_pred EEEECCCCEEEEEecccccccccCcee-eccccccccccccee-EecCC-----------------------------CC
Confidence 4456677889999997 4432 111111000000000 00000 00
Q ss_pred C--CcccCCCCCcEEEEecCCcCeEEEEeCC--Ccce--eeEecccccCCCCCCCCC-----cceeee-eEEEec-CC--
Q 022870 152 S--KDDVPAEGPKYMAVAGEQLSEVEIWDLN--TAER--CTRLHQNSCGGSPNFSSK-----GRGMCM-AVQAYL-PS-- 216 (291)
Q Consensus 152 ~--~~~~~~~~~~~~~~~g~~d~~i~~wd~~--~~~~--~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~-p~-- 216 (291)
. .++|+|+|+.+++ +-.....|+.+|.. .+.. ...+.... ...++... .-.... .+. .. |+
T Consensus 311 ~p~~ia~~p~G~~lYv-aD~~~h~I~kid~dg~~~~~~~~~~~aG~~--g~~G~~DG~~~~a~f~~P~~gv~-vd~~~~~ 386 (496)
T 3kya_A 311 WEFQIFIHPTGKYAYF-GVINNHYFMRSDYDEIKKEFITPYNFVGGY--KQSGYRDDVGTEARMNNPCQGVF-VKNPDYT 386 (496)
T ss_dssp CCEEEEECTTSSEEEE-EETTTTEEEEEEEETTTTEECCCEEEEEBT--TBCCCBCCBGGGCBCSSEEEEEE-EECTTCC
T ss_pred CceEEEEcCCCCEEEE-EeCCCCEEEEEecCCCcceecccEEecCCC--CCCcccCCcccccccCCCeEEEE-Ecccccc
Confidence 0 0779999986555 34446889886653 3321 11221000 00011110 001122 221 32 10
Q ss_pred -CCCCceEEEeecCCCcEEEEEccCCCCceeecccc------------------------ccceeEEEeecC-CCeeEEe
Q 022870 217 -KSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH------------------------LEPVLCLSIDES-CNGGISG 270 (291)
Q Consensus 217 -~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h------------------------~~~v~~~~~~~~-~~~l~s~ 270 (291)
..+|. ++++=..+..|+.++. + +. +.++.+. -....+|+++++ +.++++=
T Consensus 387 ~~~~g~-lyVaD~~N~rIr~i~~-~-G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD 462 (496)
T 3kya_A 387 GEEEYD-FYFVDRLNFCVRKVTP-E-GI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHD 462 (496)
T ss_dssp SSCCEE-EEEEEGGGTEEEEECT-T-CB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEE
T ss_pred ccCCCe-EEEEECCCCEEEEEeC-C-CC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEe
Confidence 01244 5566667888999983 3 42 3333221 124678999996 8877777
Q ss_pred cCCCeEEEEEcCCCcee
Q 022870 271 GADQKIVLYNLDHSTVS 287 (291)
Q Consensus 271 s~dg~i~vw~~~~~~~~ 287 (291)
..+..||.++++.....
T Consensus 463 ~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 463 QVGHTIRTISMEQEENV 479 (496)
T ss_dssp TTTTEEEEEEECCCC--
T ss_pred CCCCEEEEEECCCCccc
Confidence 78899999999876654
No 297
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.06 E-value=0.066 Score=41.22 Aligned_cols=165 Identities=12% Similarity=-0.004 Sum_probs=88.7
Q ss_pred CeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeecccCccceeccC
Q 022870 50 HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQA 129 (291)
Q Consensus 50 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (291)
.+.+..+... .....++|.+ +++++++-..++.|..||...... . ...... ....
T Consensus 22 ~~~~~~~p~~---~~pegia~~~--~g~lyv~d~~~~~I~~~d~~g~~~-~--~~~~~~--~p~g--------------- 76 (306)
T 2p4o_A 22 AKIITSFPVN---TFLENLASAP--DGTIFVTNHEVGEIVSITPDGNQQ-I--HATVEG--KVSG--------------- 76 (306)
T ss_dssp EEEEEEECTT---CCEEEEEECT--TSCEEEEETTTTEEEEECTTCCEE-E--EEECSS--EEEE---------------
T ss_pred ceEeEeCCCC---CCcceEEECC--CCCEEEEeCCCCeEEEECCCCceE-E--EEeCCC--Ccee---------------
Confidence 3444455432 2368999999 877666666788999998765311 0 001100 0000
Q ss_pred CCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCc-CeEEEEeCCCcceeeEecccccCCCCCCCCCcceeee
Q 022870 130 NEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL-SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCM 208 (291)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d-~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (291)
++++++|+ ++++....+ ..|..+|..+++....... .. .....
T Consensus 77 ------------------------ia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~~~~~~~-------~~----~~~~~ 120 (306)
T 2p4o_A 77 ------------------------LAFTSNGD-LVATGWNADSIPVVSLVKSDGTVETLLTL-------PD----AIFLN 120 (306)
T ss_dssp ------------------------EEECTTSC-EEEEEECTTSCEEEEEECTTSCEEEEEEC-------TT----CSCEE
T ss_pred ------------------------EEEcCCCc-EEEEeccCCcceEEEEcCCCCeEEEEEeC-------CC----ccccC
Confidence 56888887 444333222 3577788777765433221 00 11112
Q ss_pred eEEEecCCCCCCceEEEeecCCCcEEEEEccCCCC-cee---------eccccccceeEEEeecCCCee-EEecCCCeEE
Q 022870 209 AVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI-PLT---------AMKVHLEPVLCLSIDESCNGG-ISGGADQKIV 277 (291)
Q Consensus 209 ~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~-~~~---------~~~~h~~~v~~~~~~~~~~~l-~s~s~dg~i~ 277 (291)
.+. ..+. +. .+++-..++.|+++|..+ +. .+. .....-...+.| ++++..| ++-...+.|.
T Consensus 121 g~~-~~~~---~~-~~v~d~~~g~i~~~d~~~-~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~ 192 (306)
T 2p4o_A 121 GIT-PLSD---TQ-YLTADSYRGAIWLIDVVQ-PSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLL 192 (306)
T ss_dssp EEE-ESSS---SE-EEEEETTTTEEEEEETTT-TEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEE
T ss_pred ccc-ccCC---Cc-EEEEECCCCeEEEEeCCC-CcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEE
Confidence 222 3332 32 455555688999999764 21 111 001111234566 7777554 5556678999
Q ss_pred EEEcCC
Q 022870 278 LYNLDH 283 (291)
Q Consensus 278 vw~~~~ 283 (291)
+++++.
T Consensus 193 ~~~~~~ 198 (306)
T 2p4o_A 193 RIPVDS 198 (306)
T ss_dssp EEEBCT
T ss_pred EEEeCC
Confidence 999875
No 298
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.03 E-value=0.091 Score=42.35 Aligned_cols=248 Identities=11% Similarity=0.094 Sum_probs=137.0
Q ss_pred EEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCc
Q 022870 24 VCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPS 103 (291)
Q Consensus 24 l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 103 (291)
.-.+|..+.+|.-. ..++.|+|+++.+.++..... ++|.-=.|-. + +.|+-... ..|+-|+++...... .+
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~---e~VvfWkWis--~-~~l~lVT~-taVyHWsi~~~s~P~-kv 141 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT---DDVTFWKWIS--L-NTVALVTD-NAVYHWSMEGESQPV-KM 141 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS---SCCCEEEEEE--T-TEEEEECS-SEEEEEESSSSCCCE-EE
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC---CCceEEEecC--C-CeEEEEcC-CeeEEecccCCCCch-hh
Confidence 34567666666554 578999999999988887765 3477777776 4 66665554 589999997633211 01
Q ss_pred cc----cccceEEEEEeecccCccceeccC---C-CCceeeecccCccccccCCCCCC--cccCCCC----CcEEEEe--
Q 022870 104 LT----IKTNSYHFCKLSLVKEPYANAKQA---N-EPKDCYEREVGETVDTDSLCDSK--DDVPAEG----PKYMAVA-- 167 (291)
Q Consensus 104 ~~----~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~-- 167 (291)
+. +.......-..+............ + ..+.+--....+.....+.+|.. ..+-.+| ..+++.+
T Consensus 142 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r 221 (494)
T 1bpo_A 142 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVR 221 (494)
T ss_dssp EECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEEC
T ss_pred eecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEe
Confidence 11 111222222222222222211111 1 01111122233344445556654 2222222 2333322
Q ss_pred cCCcCeEEEEeCCCc-ceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCcee
Q 022870 168 GEQLSEVEIWDLNTA-ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (291)
Q Consensus 168 g~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~ 246 (291)
....+.+++-++... .....+......-+ -..+.......++. .++.. | .+..-+.-|.|++||+.+ +.++.
T Consensus 222 ~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~-fppe~~~DFPvamq-vs~ky--g--viyviTK~G~i~lyDleT-gt~i~ 294 (494)
T 1bpo_A 222 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVF-FPPEAQNDFPVAMQ-ISEKH--D--VVFLITKYGYIHLYDLET-GTCIY 294 (494)
T ss_dssp STTCCEEEEEECSCCCTTCCCCCCEEEECC-CCTTSTTCCEEEEE-EETTT--T--EEEEEETTSEEEEEETTT-CCEEE
T ss_pred cCCCcEEEEEEcCCCccCCCCccceeeeee-CCcccccCceeEEE-ecccC--C--EEEEEecCceEEEEeccc-ceeee
Confidence 112378888888543 00001100000000 11122456677777 77653 3 788888999999999999 88888
Q ss_pred eccccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCcee
Q 022870 247 AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVS 287 (291)
Q Consensus 247 ~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~ 287 (291)
.-+-..++|..-+-+.+..-++....+|.|.--.++...++
T Consensus 295 ~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 295 MNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (494)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHH
T ss_pred eecccCCceEEecccCCCCcEEEEccCceEEEEEEccccch
Confidence 77776778877777666556777778888888777776554
No 299
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.94 E-value=0.074 Score=39.75 Aligned_cols=166 Identities=11% Similarity=0.083 Sum_probs=87.4
Q ss_pred ceEEEEEeecCCCCeEE-EEeCCCeEEEEECCCCCCCCCCcccccc-ceEEEEEeecccCccceeccCCCCceeeecccC
Q 022870 64 GIVSVATGPSIGLNKVI-SQGRDGTVKCWDIENGGLSSNPSLTIKT-NSYHFCKLSLVKEPYANAKQANEPKDCYEREVG 141 (291)
Q Consensus 64 ~v~~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (291)
.+..++|+| +++.|+ +...++.|...|.. ++... ...+.. .....
T Consensus 28 ~lSGla~~~--~~~~L~aV~d~~~~I~~ld~~-g~v~~--~i~l~g~~D~EG---------------------------- 74 (255)
T 3qqz_A 28 NISSLTWSA--QSNTLFSTINKPAAIVEMTTN-GDLIR--TIPLDFVKDLET---------------------------- 74 (255)
T ss_dssp CEEEEEEET--TTTEEEEEEETTEEEEEEETT-CCEEE--EEECSSCSSEEE----------------------------
T ss_pred CcceeEEeC--CCCEEEEEECCCCeEEEEeCC-CCEEE--EEecCCCCChHH----------------------------
Confidence 499999999 666555 56778889888987 54322 111110 00000
Q ss_pred ccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCc
Q 022870 142 ETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGF 221 (291)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~ 221 (291)
+++.+++. +++ +...++.+.++++.....+......... . + ..+.+.-.-.++ |.|. +.
T Consensus 75 ------------Ia~~~~g~-~~v-s~E~~~~l~~~~v~~~~~i~~~~~~~~~-~-~-~~~~N~g~EGLA-~d~~---~~ 133 (255)
T 3qqz_A 75 ------------IEYIGDNQ-FVI-SDERDYAIYVISLTPNSEVKILKKIKIP-L-Q-ESPTNCGFEGLA-YSRQ---DH 133 (255)
T ss_dssp ------------EEECSTTE-EEE-EETTTTEEEEEEECTTCCEEEEEEEECC-C-S-SCCCSSCCEEEE-EETT---TT
T ss_pred ------------eEEeCCCE-EEE-EECCCCcEEEEEcCCCCeeeeeeeeccc-c-c-cccccCCcceEE-EeCC---CC
Confidence 44666664 333 4555788999987655432211111000 0 0 011222345565 9987 32
Q ss_pred eEEEeecCCCcEEEEEccC--CCCceeecc-------ccccceeEEEeecCC-CeeEEecCCCeEEEEEcCCC
Q 022870 222 VNVLAGYEDGSILVWDIRN--PGIPLTAMK-------VHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 222 ~~l~~g~~dg~i~vwd~~~--~~~~~~~~~-------~h~~~v~~~~~~~~~-~~l~s~s~dg~i~vw~~~~~ 284 (291)
.|+++.+.....+|.++. ....+..+. .+...+.+++++|.. ++++.....+.+.++|.+..
T Consensus 134 -~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 134 -TFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE 205 (255)
T ss_dssp -EEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC
T ss_pred -EEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC
Confidence 455555544444554431 011122211 123457899998854 45566666788888887654
No 300
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.89 E-value=0.099 Score=40.44 Aligned_cols=222 Identities=11% Similarity=0.060 Sum_probs=122.8
Q ss_pred CCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEee
Q 022870 38 TGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLS 117 (291)
Q Consensus 38 ~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (291)
.+.+|.|-|+.+++.+..-... --+.-.+| ....++.-. ..++.++|+++.+... ...+.. ......+
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi~-----AdsAIMnP--~~~ViALra-g~~LQiFnletK~klk--s~~~~e-~VvfWkW- 114 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPIS-----ADSAIMNP--ASKVIALKA-GKTLQIFNIEMKSKMK--AHTMTD-DVTFWKW- 114 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEECC-----CSEEEECS--SSSEEEEEE-TTEEEEEETTTTEEEE--EEECSS-CEEEEEE-
T ss_pred CCCEEEEEECCCCCCccccccc-----cceeeeCC--CccEEEEec-CCeEEEechHHhhhhc--ceecCC-ccEEEEe-
Confidence 3447888898876554322211 12334588 645555444 6799999999876543 222221 2222211
Q ss_pred cccCccceeccCCCCceeeecccCccccccCCCCCC--------cccCCCCCcEEEEec-----CCcCeEEEEeCCCcce
Q 022870 118 LVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK--------DDVPAEGPKYMAVAG-----EQLSEVEIWDLNTAER 184 (291)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g-----~~d~~i~~wd~~~~~~ 184 (291)
.++...+.........|++.....+...+..|.. -..+++.+.++++.- .-.|.+.+|..+.+ .
T Consensus 115 --is~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~ 191 (365)
T 2xzh_A 115 --ISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-V 191 (365)
T ss_dssp --CSSSEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-E
T ss_pred --cCCCeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-c
Confidence 1233445556666777777654444333333333 344677766555321 12477899988764 3
Q ss_pred eeEecccccCCCCCCCCCcceeeeeEEEecCCCCCC-ceEEEeec---CCCcEEEEEccCC--CCce------eecc---
Q 022870 185 CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQG-FVNVLAGY---EDGSILVWDIRNP--GIPL------TAMK--- 249 (291)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g-~~~l~~g~---~dg~i~vwd~~~~--~~~~------~~~~--- 249 (291)
-+.++ ||.. +. ..|..++... ...++.+. ..++++|.++... +.+. ..+.
T Consensus 192 sQ~ie--------Ghaa-----~F--~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppe 256 (365)
T 2xzh_A 192 SQPIE--------GHAA-----SF--AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE 256 (365)
T ss_dssp EEEEC--------CSEE-----EE--EEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTT
T ss_pred cceee--------eeee-----ee--EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCcc
Confidence 34455 5522 11 1132222111 11233222 2368999998542 2211 1111
Q ss_pred ccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 250 VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 250 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
.-.+-..++..++.-..+..-..-|.|++||++++.+++.
T Consensus 257 a~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 257 AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEE
Confidence 1245567888888888888889999999999999998863
No 301
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.89 E-value=0.0089 Score=46.69 Aligned_cols=66 Identities=15% Similarity=0.171 Sum_probs=43.4
Q ss_pred CEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEE--eCCCeEEEEECCCCC
Q 022870 31 PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ--GRDGTVKCWDIENGG 97 (291)
Q Consensus 31 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~--~~dg~i~iwd~~~~~ 97 (291)
.+++.++.||.|.-.|.++|+.+.+++.... .++....-.....+..++.+ ..||.|..+|..++.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~-~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~ 78 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENF-QPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGL 78 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGS-CCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCcc-CCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCc
Confidence 3788899999999999999999998876511 12333221110012234433 589999999987763
No 302
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.88 E-value=0.041 Score=44.15 Aligned_cols=113 Identities=12% Similarity=0.116 Sum_probs=71.9
Q ss_pred cccCCCCCcEEEEecCCcCeEEEEeCCCcc------------eeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCc
Q 022870 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAE------------RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGF 221 (291)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~ 221 (291)
+..+|+|..+ |..|. ..|.|-.+..+. ..+.+... .........+..+. |+|.+..+.
T Consensus 71 lvlSpsG~lL-Al~g~--~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~------~~~~~~~s~I~qVl-WHPl~~~ds 140 (452)
T 3pbp_A 71 VISSTSGDLL-CLFND--NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSID------EEEVGPKSSIKKVL-FHPKSYRDS 140 (452)
T ss_dssp EEECTTSSEE-EEECS--SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGG------GCC--CCCCEEEEE-ECTTBGGGC
T ss_pred EEECCCCCEE-EEecC--CeEEEEEecCccccCcccccccccceeEEEcC------CcccCCCCceeEEE-eccccCCCC
Confidence 5588999654 44564 689998887321 11222211 00011245677777 999877666
Q ss_pred eEEEeecCCCcEEEEEccC-CCCceeecc---------ccccceeEEEeecCCCeeEE--ecCCCeEEE
Q 022870 222 VNVLAGYEDGSILVWDIRN-PGIPLTAMK---------VHLEPVLCLSIDESCNGGIS--GGADQKIVL 278 (291)
Q Consensus 222 ~~l~~g~~dg~i~vwd~~~-~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~s--~s~dg~i~v 278 (291)
.|++-..|+.|++||+.. ..+|. .+. .....|.+++|.+++..|.. .+..|.|+-
T Consensus 141 -~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 141 -CIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp -EEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred -eEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 899999999999999985 12333 222 22357889999888777766 447777754
No 303
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.80 E-value=0.15 Score=41.14 Aligned_cols=222 Identities=11% Similarity=0.054 Sum_probs=123.6
Q ss_pred CCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEee
Q 022870 38 TGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLS 117 (291)
Q Consensus 38 ~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (291)
.+.+|.|-|+.+++.+..-... --+.-.+| ..+.++.-. ..++.++|+++..... ...+.. ......+
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~-----AdsAIMnP--~~~iiALra-g~~lQiFnle~K~klk--s~~~~e-~VvfWkW- 113 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPIS-----ADSAIMNP--ASKVIALKA-GKTLQIFNIEMKSKMK--AHTMTD-DVTFWKW- 113 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECC-----CSEEEECS--SSSCEEEEE-TTEEEEEETTTTEEEE--EEECSS-CCCEEEE-
T ss_pred CCCeEEEEECCCCCcceecccc-----cceeeeCC--CCcEEEEec-CCeEEEEchHHhhhhc--ceecCC-CceEEEe-
Confidence 3447888888876554322211 12445678 555665444 6799999999876443 122221 1111111
Q ss_pred cccCccceeccCCCCceeeecccCccccccCCCCCC--------cccCCCCCcEEEEec-----CCcCeEEEEeCCCcce
Q 022870 118 LVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK--------DDVPAEGPKYMAVAG-----EQLSEVEIWDLNTAER 184 (291)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g-----~~d~~i~~wd~~~~~~ 184 (291)
.++...+......+..|++.....+...+..|.. -..+++.+.++++.- .-.|.+.+|..+.+ .
T Consensus 114 --is~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~ 190 (494)
T 1bpo_A 114 --ISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-V 190 (494)
T ss_dssp --EETTEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-C
T ss_pred --cCCCeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-c
Confidence 1233445566667777777654444333333333 344677766655321 13577899988764 3
Q ss_pred eeEecccccCCCCCCCCCcceeeeeEEEecCCCCC-CceEEEeecC---CCcEEEEEccCC--CCce------eecc---
Q 022870 185 CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ-GFVNVLAGYE---DGSILVWDIRNP--GIPL------TAMK--- 249 (291)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-g~~~l~~g~~---dg~i~vwd~~~~--~~~~------~~~~--- 249 (291)
-+.++ ||.. .-. .+..++.. ....++.+.. .++++|.++... +.+. ..+.
T Consensus 191 sQ~ie--------Ghaa----~F~---~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe 255 (494)
T 1bpo_A 191 SQPIE--------GHAA----SFA---QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE 255 (494)
T ss_dssp EEEEC--------CSEE----EEE---EEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTT
T ss_pred cchhe--------eeee----eeE---EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcc
Confidence 34454 5522 111 12222111 1113333333 378999998642 1111 1111
Q ss_pred ccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 250 VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 250 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
.-.+-..++..++.-..+.....-|.|+++|++++.+++.
T Consensus 256 ~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 256 AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (494)
T ss_dssp STTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred cccCceeEEEecccCCEEEEEecCceEEEEecccceeeee
Confidence 1234567888898888888889999999999999998753
No 304
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.78 E-value=0.12 Score=39.61 Aligned_cols=61 Identities=18% Similarity=0.048 Sum_probs=33.4
Q ss_pred EEEeecCC-----CcEEEEEccCCCCce--eeccccccceeEEEeecCCCeeEEecCC-----CeEEEEEcCCCce
Q 022870 223 NVLAGYED-----GSILVWDIRNPGIPL--TAMKVHLEPVLCLSIDESCNGGISGGAD-----QKIVLYNLDHSTV 286 (291)
Q Consensus 223 ~l~~g~~d-----g~i~vwd~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~s~d-----g~i~vw~~~~~~~ 286 (291)
+++.|+.+ ..+.+||+.+ .+-. ..+...... .+++.. ++++++.|+.+ ..+.+||+++.+-
T Consensus 209 i~v~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~-~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 209 IYVVGGFDGTAHLSSVEAYNIRT-DSWTTVTSMTTPRCY-VGATVL-RGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp EEEECCBCSSSBCCCEEEEETTT-TEEEEECCCSSCCBS-CEEEEE-TTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred EEEEeCCCCCcccceEEEEeCCC-CcEEECCCCCCcccc-eeEEEE-CCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 66666653 4689999986 3211 111111111 122222 55677777765 4688899887653
No 305
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.75 E-value=0.12 Score=39.52 Aligned_cols=65 Identities=15% Similarity=0.179 Sum_probs=34.7
Q ss_pred CCCEEEEecCC-----CeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC-----eEEEEECCCCC
Q 022870 29 TKPILFAGTTG-----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG-----TVKCWDIENGG 97 (291)
Q Consensus 29 ~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~ 97 (291)
++.+++.|+.+ ..+.+||..+.+-...-....... -.+++.. ++..++.|+.++ .+.+||+.+.+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 135 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRS-TLGAAVL---NGLLYAVGGFDGSTGLSSVEAYNIKSNE 135 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCB-SCEEEEE---TTEEEEEEEECSSCEEEEEEEEETTTTE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcccc-ceEEEEE---CCEEEEEcCCCCCccCceEEEEeCCCCe
Confidence 55567777754 358889987765333211111111 1222222 446667777553 46777877654
No 306
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.74 E-value=0.13 Score=39.54 Aligned_cols=65 Identities=11% Similarity=0.163 Sum_probs=36.4
Q ss_pred CCCEEEEecCC----CeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC------CeEEEEECCCCC
Q 022870 29 TKPILFAGTTG----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD------GTVKCWDIENGG 97 (291)
Q Consensus 29 ~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~ 97 (291)
++.+++.|+.+ ..+.+||..+.+-...-....... -.+++.. ++..++.|+.+ ..+.+||..+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRD-SLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCB-SCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcccc-ceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 55577777754 678889988775433222111111 1122222 44666777765 457788887664
No 307
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.52 E-value=0.2 Score=39.01 Aligned_cols=108 Identities=12% Similarity=0.085 Sum_probs=55.3
Q ss_pred cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcE
Q 022870 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 233 (291)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i 233 (291)
+++.+++. +++ .+. +|.+++.+...++.-..+.. .. ......+.++. |.|+ +. +++++ .+|.|
T Consensus 210 ~~~~~~g~-~~~-~~~-~G~~~~s~~D~G~tW~~~~~-------~~-~~~~~~~~~v~-~~~~---~~-~~~~g-~~g~i 272 (327)
T 2xbg_A 210 MGFTPDGR-LWM-IVN-GGKIAFSDPDNSENWGELLS-------PL-RRNSVGFLDLA-YRTP---NE-VWLAG-GAGAL 272 (327)
T ss_dssp EEECTTSC-EEE-EET-TTEEEEEETTEEEEECCCBC-------TT-SSCCSCEEEEE-ESSS---SC-EEEEE-STTCE
T ss_pred eEECCCCC-EEE-EeC-CceEEEecCCCCCeeEeccC-------Cc-ccCCcceEEEE-ecCC---CE-EEEEe-CCCeE
Confidence 34667765 443 333 57777764332333222221 00 00112355665 7765 33 44444 46766
Q ss_pred EEEEccCCCCceeecc---ccccceeEEEeecCCCeeEEecCCCeEEEEEc
Q 022870 234 LVWDIRNPGIPLTAMK---VHLEPVLCLSIDESCNGGISGGADQKIVLYNL 281 (291)
Q Consensus 234 ~vwd~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~ 281 (291)
++.... ++.-..+. .....+.++.|.+++. ++.++.+|.|.-++-
T Consensus 273 -~~S~Dg-G~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 273 -LCSQDG-GQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp -EEESST-TSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred -EEeCCC-CcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 344443 44333333 2245678899976555 566667898776653
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.17 E-value=0.35 Score=38.13 Aligned_cols=49 Identities=8% Similarity=-0.015 Sum_probs=32.0
Q ss_pred CcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEE-ecCCCeEEEEEcCC
Q 022870 231 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS-GGADQKIVLYNLDH 283 (291)
Q Consensus 231 g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s-~s~dg~i~vw~~~~ 283 (291)
|.|+-+|. ++ +..+...-...+.++|+|+++.|.. -+..+.|..|+++.
T Consensus 203 g~vyr~d~---~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 203 SFVTYYSP---ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEEEECT---TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cEEEEEEC---Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 45555554 22 2233333456799999999977654 45678999999874
No 309
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.10 E-value=0.58 Score=40.12 Aligned_cols=206 Identities=9% Similarity=-0.042 Sum_probs=112.8
Q ss_pred cceeEEEEcCCCCE-EEEecCCCeEEEEeCCCCeEEEEEeee----cCCcceEEEEEeecCCCCeE-EEEeCCCeEEEEE
Q 022870 19 ASVTDVCFHQTKPI-LFAGTTGGELRIWDTVQHRTVSSSWVH----SAAHGIVSVATGPSIGLNKV-ISQGRDGTVKCWD 92 (291)
Q Consensus 19 ~~v~~l~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~l-~s~~~dg~i~iwd 92 (291)
..+.+++|.+.... +.+=...+.|+.++.........+... .....+..+++.. .++.| ++-+..+.|.+.+
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~--~~~nLY~td~~~~~I~v~~ 417 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDI--YSRYIYWTCEATNVINVTR 417 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEET--TTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeec--cCCeEEEEcCCCCEEEEEE
Confidence 45788999985444 455556788988887643322223220 0112378999987 55544 4666778898888
Q ss_pred CCCCCCCCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcC
Q 022870 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS 172 (291)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~ 172 (291)
+..... . .+.......... ++++|....++.+-.....
T Consensus 418 ~~G~~~-~-~l~~~~l~~Pr~----------------------------------------iavdp~~g~ly~tD~g~~~ 455 (628)
T 4a0p_A 418 LDGRSV-G-VVLKGEQDRPRA----------------------------------------VVVNPEKGYMYFTNLQERS 455 (628)
T ss_dssp TTSCEE-E-EEEECTTCCEEE----------------------------------------EEEETTTTEEEEEEEETTE
T ss_pred CCCCeE-E-EEEeCCCCceee----------------------------------------EEEecCCCeEEEeecCCCC
Confidence 864311 0 000000000000 5677755555553322222
Q ss_pred -eEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeecc-c
Q 022870 173 -EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK-V 250 (291)
Q Consensus 173 -~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~-~ 250 (291)
.|...++........... . -.....++ +.+.. ++ +.++-+..+.|...|+.. .....+. .
T Consensus 456 ~~I~r~~~dG~~~~~l~~~--------~----l~~P~gla-~D~~~--~~-LYw~D~~~~~I~~~~~dG--~~r~~~~~~ 517 (628)
T 4a0p_A 456 PKIERAALDGTEREVLFFS--------G----LSKPIALA-LDSRL--GK-LFWADSDLRRIESSDLSG--ANRIVLEDS 517 (628)
T ss_dssp EEEEEEETTSCSCEEEECS--------S----CSCEEEEE-EETTT--TE-EEEEETTTTEEEEEETTS--CSCEEEECS
T ss_pred CeEEEEeCCCCCcEEEEec--------c----CCCccEEE-EeCCC--CE-EEEEeCCCCEEEEEeCCC--CceEEEEcC
Confidence 677777764333222221 1 12345555 77652 32 444555678999999863 3333333 3
Q ss_pred cccceeEEEeecCCCeeEEecCCCeEEEEEcCCCcee
Q 022870 251 HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVS 287 (291)
Q Consensus 251 h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~ 287 (291)
......+|+... +.++++=...+.|...|..+++..
T Consensus 518 ~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~~ 553 (628)
T 4a0p_A 518 NILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREGR 553 (628)
T ss_dssp SCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSSCC
T ss_pred CCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCCc
Confidence 334567888877 455566666778888888766543
No 310
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.01 E-value=0.36 Score=38.83 Aligned_cols=76 Identities=14% Similarity=0.105 Sum_probs=55.7
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEeCCCCe------------EEEEEeeec----CCcceEEEEEeecC-CCCeEEEE
Q 022870 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHR------------TVSSSWVHS----AAHGIVSVATGPSI-GLNKVISQ 82 (291)
Q Consensus 20 ~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~------------~~~~~~~~~----~~~~v~~~~~~~~~-~~~~l~s~ 82 (291)
.|..+..+|+|++||..+. .+|.|-.+..+. ..+.+.... ...+|..+.|+|.. .+..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 6888999999999998865 578888877321 122333221 12569999999932 24689999
Q ss_pred eCCCeEEEEECCCC
Q 022870 83 GRDGTVKCWDIENG 96 (291)
Q Consensus 83 ~~dg~i~iwd~~~~ 96 (291)
..|+.|++||+...
T Consensus 146 tsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 146 KEDDTITMFDILNS 159 (452)
T ss_dssp ETTSCEEEEETTCT
T ss_pred ecCCEEEEEEcccC
Confidence 99999999999873
No 311
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.98 E-value=0.43 Score=37.60 Aligned_cols=63 Identities=13% Similarity=0.059 Sum_probs=40.5
Q ss_pred eeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCce--eeccccccceeEEEeec-CCCeeEEecCC
Q 022870 206 MCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL--TAMKVHLEPVLCLSIDE-SCNGGISGGAD 273 (291)
Q Consensus 206 ~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~--~~~~~h~~~v~~~~~~~-~~~~l~s~s~d 273 (291)
....++ |+|+ ++.+.++-+..+.|+.|++...+... ..+ ...+..-.+++++ +|++.+++..+
T Consensus 222 ~pNGia-~spD---g~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 222 FANGIN-ISPD---GKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp SEEEEE-ECTT---SSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred ccCcce-ECCC---CCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 345565 9998 54355556678899999997423321 223 2245678899998 59877766533
No 312
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.96 E-value=0.67 Score=39.66 Aligned_cols=202 Identities=6% Similarity=-0.089 Sum_probs=106.3
Q ss_pred ceeEEEEcC-CCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCC
Q 022870 20 SVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98 (291)
Q Consensus 20 ~v~~l~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 98 (291)
.+.+++|.+ ++.++++-...+.|+.++++.......+.... .....+++.+. .++++++-+..+.|.+.++.....
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~--~~p~GlAvD~~-~~~lY~tD~~~~~I~v~~~~G~~~ 426 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQI--AHPDGIAVDWV-ARNLYWTDTGTDRIEVTRLNGTMR 426 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC--SCCCEEEEETT-TTEEEEEETTTTEEEEEETTSCSC
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCC--CCcCceEEecc-cCcEEEEeCCCCcEEEEeCCCCeE
Confidence 467888988 44445555567889889876543332232221 23678888761 334445555678899888875421
Q ss_pred CCCCccccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEEEe
Q 022870 99 SSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWD 178 (291)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~wd 178 (291)
.. +.......... +++.|....++.+--...+.|...+
T Consensus 427 ~~--l~~~~l~~P~~----------------------------------------iavdp~~G~ly~tD~g~~~~I~r~~ 464 (619)
T 3s94_A 427 KI--LISEDLEEPRA----------------------------------------IVLDPMVGYMYWTDWGEIPKIERAA 464 (619)
T ss_dssp EE--EECTTCCSEEE----------------------------------------EEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EE--EEECCCCCeee----------------------------------------EEEEcCCCcEEEecCCCCCEEEEEc
Confidence 00 10000000000 5577765555553322246677777
Q ss_pred CCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeeccccccceeEE
Q 022870 179 LNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCL 258 (291)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~ 258 (291)
+..... ..+.. .. -.....++ +.+.. ++ +.++=+..+.|..+++.. ......+...-....+|
T Consensus 465 ~dG~~~-~~l~~-------~~----l~~P~Gla-lD~~~--~~-LY~aD~~~~~I~~~~~dG-~~~~~~~~~~l~~P~gl 527 (619)
T 3s94_A 465 LDGSDR-VVLVN-------TS----LGWPNGLA-LDYDE--GK-IYWGDAKTDKIEVMNTDG-TGRRVLVEDKIPHIFGF 527 (619)
T ss_dssp TTSCSC-EEEEC-------SS----CSCEEEEE-EETTT--TE-EEEEETTTTEEEEEESSS-CCCEEEEECCCCSSCCE
T ss_pred cCCCcc-EEEEe-------CC----CCCCeeeE-EcccC--CE-EEEEECCCCEEEEEecCC-CceEEEeccCCCCcEEE
Confidence 754332 22221 11 12344555 77652 33 445555667899999864 22211122222334567
Q ss_pred EeecCCCeeEEecCCCeEEEEEcCCC
Q 022870 259 SIDESCNGGISGGADQKIVLYNLDHS 284 (291)
Q Consensus 259 ~~~~~~~~l~s~s~dg~i~vw~~~~~ 284 (291)
+...+ .+.++-...+.|...+..++
T Consensus 528 av~~~-~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 528 TLLGD-YVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp EEETT-EEEEECTTSSCEEEEESSSC
T ss_pred EEECC-EEEEeecCCCeEEEEEcCCC
Confidence 77655 44455555667777777665
No 313
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.95 E-value=1.1 Score=42.17 Aligned_cols=246 Identities=11% Similarity=0.084 Sum_probs=125.0
Q ss_pred EcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCccc
Q 022870 26 FHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLT 105 (291)
Q Consensus 26 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 105 (291)
.+|..+.+|.-. ..++.|+|+++.+.+++.... ++|.-=.|-. + +.|+-.+. ..|..|++....... .++.
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~~---e~VvfWkWis--~-~~l~lVT~-~aVyHW~~~~~s~P~-k~fd 143 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT---DDVTFWKWIS--L-NTVALVTD-NAVYHWSMEGESQPV-KMFD 143 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhcccccC---CCceEEEecC--C-CeeEEEcC-CeEEEeccCCCCccH-HHHh
Confidence 456555665544 578999999988877766654 4477777765 4 56665554 579999997532111 0111
Q ss_pred cc----cceEEEEEeecccCccceeccC---C-CCceeeecccCccccccCCCCCC--ccc----CCCCCcEEEEe--cC
Q 022870 106 IK----TNSYHFCKLSLVKEPYANAKQA---N-EPKDCYEREVGETVDTDSLCDSK--DDV----PAEGPKYMAVA--GE 169 (291)
Q Consensus 106 ~~----~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~--g~ 169 (291)
.+ ......-..+............ + ..+.+--....+.....+.||.. ..+ .+....++..+ ..
T Consensus 144 R~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~ 223 (1630)
T 1xi4_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (1630)
T ss_pred cchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecC
Confidence 11 1111111112222222211111 1 11111122223334444555544 111 12223343321 11
Q ss_pred CcCeEEEEeCCCc-ceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeec
Q 022870 170 QLSEVEIWDLNTA-ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 248 (291)
Q Consensus 170 ~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~ 248 (291)
..+.++|-++... .....+......-+ -.+........++. .++.. | .+..-+.-|.|.+||+.+ +.++..-
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f~kk~~~~~-~~~~~~~Dfpv~~~-vs~k~--g--~iy~itk~G~~~~~d~~t-~~~i~~~ 296 (1630)
T 1xi4_A 224 AGGKLHIIEVGTPPTGNQPFPKKAVDVF-FPPEAQNDFPVAMQ-ISEKH--D--VVFLITKYGYIHLYDLET-GTCIYMN 296 (1630)
T ss_pred CCceEEEEecCCCccCCCCCcccccccc-CCcccccCcceEEE-ecccc--C--EEEEEecCceEEEEeccc-chhhhhc
Confidence 2367888888543 11111110000000 01112345566666 66652 3 777888899999999999 7777666
Q ss_pred cccccceeEEEeecCCCeeEEecCCCeEEEEEcCCCcee
Q 022870 249 KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVS 287 (291)
Q Consensus 249 ~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~ 287 (291)
+-...+|...+-+....-++.....|.|.--.++...++
T Consensus 297 ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 297 RISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (1630)
T ss_pred cccCCceEEeccCCCCCceEEEcCCceEEEEEEccchhh
Confidence 655666666555544334555667777777666665544
No 314
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.89 E-value=0.4 Score=36.55 Aligned_cols=65 Identities=14% Similarity=0.167 Sum_probs=35.0
Q ss_pred CCCEEEEec-CC-----CeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC-----CeEEEEECCCCC
Q 022870 29 TKPILFAGT-TG-----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD-----GTVKCWDIENGG 97 (291)
Q Consensus 29 ~~~~l~s~~-~d-----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~ 97 (291)
++.+++.|+ .+ ..+.+||+.+.+-...-..... ..-.+++. . ++..++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~-~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRK-RRYVASVS-L--HDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSC-CBSCEEEE-E--TTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChh-hccccEEE-E--CCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 445666676 33 3688999887653321111111 11122222 2 44677777755 358888887765
No 315
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.84 E-value=0.44 Score=36.56 Aligned_cols=61 Identities=21% Similarity=0.221 Sum_probs=33.0
Q ss_pred EEEeecCC-----CcEEEEEccCCCCceeecccc--ccceeEEEeecCCCeeEEecCC-----CeEEEEEcCCCce
Q 022870 223 NVLAGYED-----GSILVWDIRNPGIPLTAMKVH--LEPVLCLSIDESCNGGISGGAD-----QKIVLYNLDHSTV 286 (291)
Q Consensus 223 ~l~~g~~d-----g~i~vwd~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~s~s~d-----g~i~vw~~~~~~~ 286 (291)
+++.|+.+ ..+.+||+.+ .+ -..+... ...-.+++.. ++++++.|+.+ ..+.+||+++.+-
T Consensus 218 iyv~GG~~~~~~~~~v~~yd~~~-~~-W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 218 IYAAGGYDGQDQLNSVERYDVET-ET-WTFVAPMKHRRSALGITVH-QGRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp EEEECCBCSSSBCCCEEEEETTT-TE-EEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred EEEEeCCCCCCccceEEEEeCCC-Cc-EEECCCCCCCccceEEEEE-CCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 56666543 5699999886 32 1111110 0111122222 45677777754 4688899887653
No 316
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.63 E-value=0.55 Score=43.98 Aligned_cols=220 Identities=10% Similarity=0.045 Sum_probs=117.3
Q ss_pred CCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCCCCCCccccccceEEEEEeec
Q 022870 39 GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL 118 (291)
Q Consensus 39 dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (291)
..+|.|-|+.+++.+..-... --+.-.+| ..+.++.- ...++.|+|+++..... ...+.. ..... .
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~-----AdsAIMnP--~~~iiALr-ag~~lQiFnl~~k~klk--s~~~~e-~VvfW--k- 112 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPIS-----ADSAIMNP--ASKVIALK-AGKTLQIFNIEMKSKMK--AHTMTD-DVTFW--K- 112 (1630)
T ss_pred CceEEEEECCCCCCccccccc-----chhhccCC--CcceEEEe-cCCeEEEeehHHhhhhc--ccccCC-CceEE--E-
Confidence 347888888776544221111 22444677 54555443 36799999999876544 222221 11111 1
Q ss_pred ccCccceeccCCCCceeeecccCccccccCCCCCC--------cccCCCCCcEEEEe-----cCCcCeEEEEeCCCccee
Q 022870 119 VKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK--------DDVPAEGPKYMAVA-----GEQLSEVEIWDLNTAERC 185 (291)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-----g~~d~~i~~wd~~~~~~~ 185 (291)
..++...+......+..|++.....+...+..|.. -..+++.+.++++. |.-.|.+.+|..+.+. .
T Consensus 113 Wis~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-s 191 (1630)
T 1xi4_A 113 WISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-S 191 (1630)
T ss_pred ecCCCeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-c
Confidence 12334456666777788888654444444444433 34456666655432 2235788888887542 2
Q ss_pred eEecccccCCCCCCCCCcceeeeeEEEecCCCCC-CceEEEeec---CCCcEEEEEccCC--CCce------eeccc---
Q 022870 186 TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQ-GFVNVLAGY---EDGSILVWDIRNP--GIPL------TAMKV--- 250 (291)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-g~~~l~~g~---~dg~i~vwd~~~~--~~~~------~~~~~--- 250 (291)
+.++ ||...... +..++.. ....++.+. ..++++|.++..+ +.+. ..+..
T Consensus 192 Q~ie--------gha~~F~~-------~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~ 256 (1630)
T 1xi4_A 192 QPIE--------GHAASFAQ-------FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 256 (1630)
T ss_pred hhhh--------HhHhhhhe-------eccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCccc
Confidence 2233 44221110 1111000 110222221 2368999988542 1111 11111
Q ss_pred cccceeEEEeecCCCeeEEecCCCeEEEEEcCCCceee
Q 022870 251 HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSH 288 (291)
Q Consensus 251 h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~ 288 (291)
-.+-..++..++.-..+...+.-|.|.++|++++.+++
T Consensus 257 ~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 257 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred ccCcceEEEeccccCEEEEEecCceEEEEecccchhhh
Confidence 13445677788887788888899999999999998764
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.62 E-value=0.53 Score=35.92 Aligned_cols=53 Identities=9% Similarity=0.112 Sum_probs=28.1
Q ss_pred CcEEEEEccCCCCc--eeeccccccceeEEEeecCCCeeEEecCC-----CeEEEEEcCCCce
Q 022870 231 GSILVWDIRNPGIP--LTAMKVHLEPVLCLSIDESCNGGISGGAD-----QKIVLYNLDHSTV 286 (291)
Q Consensus 231 g~i~vwd~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~s~d-----g~i~vw~~~~~~~ 286 (291)
..+.+||+.+ .+- +..+...... .+++.. ++.+++.|+.+ ..+.+||+++.+-
T Consensus 173 ~~~~~yd~~~-~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 173 STVECYNATT-NEWTYIAEMSTRRSG-AGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp CCEEEEETTT-TEEEEECCCSSCCBS-CEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred cEEEEEeCCC-CcEEECCCCcccccc-ccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 4588999876 321 1111111111 122222 45677777764 3688999887653
No 318
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.21 E-value=0.81 Score=35.87 Aligned_cols=55 Identities=16% Similarity=0.044 Sum_probs=28.2
Q ss_pred cEEEEEccCCCC--ceeeccccccceeEEEeecCCCeeEEecCCC------eEEEEEcCCCceeee
Q 022870 232 SILVWDIRNPGI--PLTAMKVHLEPVLCLSIDESCNGGISGGADQ------KIVLYNLDHSTVSHC 289 (291)
Q Consensus 232 ~i~vwd~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg------~i~vw~~~~~~~~~~ 289 (291)
.+.+||+.+ .+ .+..+......-.. ..-++++++.|+.++ .|.++++++++.+..
T Consensus 286 ~~~~yd~~~-~~W~~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 286 STDIHLWHN-GKWDKSGELSQGRAYGVS--LPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CCEEEECC----CEEEEECSSCCBSSEE--EEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eEEEEecCC-CceeeCCCCCCCccccee--EEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 578899886 32 12222211111112 223556777777552 466779998887754
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.18 E-value=0.78 Score=35.15 Aligned_cols=61 Identities=18% Similarity=0.067 Sum_probs=32.5
Q ss_pred EEEeecCC-----CcEEEEEccCCCCc--eeeccccccceeEEEeecCCCeeEEecCC-----CeEEEEEcCCCce
Q 022870 223 NVLAGYED-----GSILVWDIRNPGIP--LTAMKVHLEPVLCLSIDESCNGGISGGAD-----QKIVLYNLDHSTV 286 (291)
Q Consensus 223 ~l~~g~~d-----g~i~vwd~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~s~d-----g~i~vw~~~~~~~ 286 (291)
+++.|+.+ ..+.+||+.+ .+- +..+...... .+++.. ++.+++.|+.+ ..+.+||+++.+-
T Consensus 171 iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 171 LYAVGGFDGTNRLNSAECYYPER-NEWRMITAMNTIRSG-AGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp EEEECCBCSSCBCCCEEEEETTT-TEEEECCCCSSCCBS-CEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EEEEeCCCCCCcCceEEEEeCCC-CeEeeCCCCCCcccc-ceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 55555543 4689999876 321 1111111111 122222 55577777664 4688999887653
No 320
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.99 E-value=1 Score=35.45 Aligned_cols=73 Identities=18% Similarity=0.190 Sum_probs=44.6
Q ss_pred ccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEE--EEEee-ecCCcceEEEEEeecCC---CCeEEEEeC-C-----
Q 022870 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTV--SSSWV-HSAAHGIVSVATGPSIG---LNKVISQGR-D----- 85 (291)
Q Consensus 18 ~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~--~~~~~-~~~~~~v~~~~~~~~~~---~~~l~s~~~-d----- 85 (291)
-..-..++|.|+|+++++ ..+|.|++++ +++.. ..+.. .........|+++| + +..|+.+.. +
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~p--df~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHP--RFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECT--TTTTSCEEEEEEEECTTSSE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECC--CCCCCCEEEEEEecCCCCCc
Confidence 345679999999986555 5569999998 44422 21211 11123478999999 6 445554433 2
Q ss_pred CeEEEEECCC
Q 022870 86 GTVKCWDIEN 95 (291)
Q Consensus 86 g~i~iwd~~~ 95 (291)
+.|..|+...
T Consensus 105 ~~v~r~~~~~ 114 (352)
T 2ism_A 105 NQVVRLRHLG 114 (352)
T ss_dssp EEEEEEEECS
T ss_pred cEEEEEEeCC
Confidence 5666676653
No 321
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.94 E-value=2.3 Score=39.39 Aligned_cols=74 Identities=7% Similarity=-0.022 Sum_probs=46.6
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCC----CCeEEEEeC-CCeEEEEECC
Q 022870 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIG----LNKVISQGR-DGTVKCWDIE 94 (291)
Q Consensus 20 ~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~l~s~~~-dg~i~iwd~~ 94 (291)
.|...+.+. .+++.++ ++.+..+++++++... .....-...|.|+++.|..+ +.+++.|.. |++|+|+++.
T Consensus 515 ~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~-~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 515 NISVASCNS--SQVVVAV-GRALYYLQIHPQELRQ-ISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEE-EEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred EEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceee-ecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 455555443 3555554 5778888776654332 22111124599999986322 368888886 9999999998
Q ss_pred CCC
Q 022870 95 NGG 97 (291)
Q Consensus 95 ~~~ 97 (291)
+.+
T Consensus 591 ~l~ 593 (1158)
T 3ei3_A 591 SFE 593 (1158)
T ss_dssp TCC
T ss_pred CCC
Confidence 654
No 322
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.87 E-value=0.98 Score=34.70 Aligned_cols=66 Identities=12% Similarity=0.176 Sum_probs=33.2
Q ss_pred CCCCEEEEecC-----C------CeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC--------CeE
Q 022870 28 QTKPILFAGTT-----G------GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD--------GTV 88 (291)
Q Consensus 28 ~~~~~l~s~~~-----d------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d--------g~i 88 (291)
.++.+++.|+. . ..+.+||..+.+-.. +..-..+..-.+++.. ++..++.|+.+ ..+
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~ 119 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-MPPLPSPRCLFGLGEA---LNSIYVVGGREIKDGERCLDSV 119 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-CCCBSSCEESCEEEEE---TTEEEEECCEESSTTCCBCCCE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-CCCCCcchhceeEEEE---CCEEEEEeCCcCCCCCcccceE
Confidence 46667777773 1 127788887765422 1111111001122222 34566666632 357
Q ss_pred EEEECCCCC
Q 022870 89 KCWDIENGG 97 (291)
Q Consensus 89 ~iwd~~~~~ 97 (291)
.+||..+.+
T Consensus 120 ~~~d~~~~~ 128 (315)
T 4asc_A 120 MCYDRLSFK 128 (315)
T ss_dssp EEEETTTTE
T ss_pred EEECCCCCc
Confidence 788877654
No 323
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.67 E-value=1.5 Score=35.90 Aligned_cols=30 Identities=17% Similarity=0.212 Sum_probs=21.0
Q ss_pred eEEEEEeecCCCCeEEEEeCCCeEEEEECCCC
Q 022870 65 IVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96 (291)
Q Consensus 65 v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 96 (291)
.+.|+|.| +|+++++-...+.|++++..++
T Consensus 29 P~~~a~~p--dG~l~V~e~~gg~I~~~~~~~g 58 (454)
T 1cru_A 29 PHALLWGP--DNQIWLTERATGKILRVNPESG 58 (454)
T ss_dssp EEEEEECT--TSCEEEEETTTCEEEEECTTTC
T ss_pred ceEEEEcC--CCcEEEEEcCCCEEEEEECCCC
Confidence 68999999 9876665443346888876443
No 324
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.34 E-value=1.3 Score=33.79 Aligned_cols=62 Identities=6% Similarity=-0.019 Sum_probs=32.9
Q ss_pred EEEEecC--CCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC----CeEEEEECCCCC
Q 022870 32 ILFAGTT--GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD----GTVKCWDIENGG 97 (291)
Q Consensus 32 ~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~ 97 (291)
+++.|+. ...+.+||..+.+-...-....... -.+++. - ++..++.|+.+ ..+.+||..+.+
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~-~~~~~~-~--~~~lyv~GG~~~~~~~~~~~~d~~~~~ 81 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRR-DAACVF-W--DNVVYILGGSQLFPIKRMDCYNVVKDS 81 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCB-SCEEEE-E--TTEEEEECCBSSSBCCEEEEEETTTTE
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccc-eeEEEE-E--CCEEEEEeCCCCCCcceEEEEeCCCCe
Confidence 4555654 3568899988765432211111111 112222 2 44666777754 567788877664
No 325
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.99 E-value=3 Score=36.64 Aligned_cols=199 Identities=11% Similarity=0.087 Sum_probs=100.6
Q ss_pred cceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCC
Q 022870 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98 (291)
Q Consensus 19 ~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 98 (291)
..|.++....+| .|..|+.+| +..||..+.+......... ..|.++.. . + ..|..++.+ -|..+|..+.+.
T Consensus 63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~--~~i~~i~~-~--~-g~lWigt~~-Gl~~~~~~~~~~ 133 (758)
T 3ott_A 63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFP--TDVRTMAL-Q--G-DTLWLGALN-GLYTYQLQSRKL 133 (758)
T ss_dssp SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCC--SCEEEEEE-E--T-TEEEEEETT-EEEEEETTTCCE
T ss_pred ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCC--ceEEEEEe-c--C-CcEEEEcCC-cceeEeCCCCeE
Confidence 458888777776 566666665 7889987764332111111 23776653 3 4 456666665 578888876542
Q ss_pred CCCCcc--ccccceEEEEEeecccCccceeccCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCCcCeEEE
Q 022870 99 SSNPSL--TIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEI 176 (291)
Q Consensus 99 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~i~~ 176 (291)
..-... .+....... +....++. +.+.+ . +-+..
T Consensus 134 ~~~~~~~~~l~~~~i~~----------------------------------------i~~d~~g~-lWigt--~-~Gl~~ 169 (758)
T 3ott_A 134 TSFDTRRNGLPNNTIYS----------------------------------------IIRTKDNQ-IYVGT--Y-NGLCR 169 (758)
T ss_dssp EEECHHHHCCSCSCEEE----------------------------------------EEECTTCC-EEEEE--T-TEEEE
T ss_pred EEeccCCCCcCCCeEEE----------------------------------------EEEcCCCC-EEEEe--C-CCHhh
Confidence 110000 000000000 22334554 44423 2 34888
Q ss_pred EeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcEEEEEccCCCCceeecccccccee
Q 022870 177 WDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVL 256 (291)
Q Consensus 177 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~ 256 (291)
||..+++.. .+... .........+.++. ..++ +. .|..|+. +-+..+|..+ ++...........|.
T Consensus 170 ~~~~~~~~~-~~~~~------~~~~~~~~~i~~i~-~d~~---~~-~lWigt~-~Gl~~~~~~~-~~~~~~~~l~~~~i~ 235 (758)
T 3ott_A 170 YIPSNGKFE-GIPLP------VHSSQSNLFVNSLL-EDTT---RQ-CVWIGTE-GYLFQYFPST-GQIKQTEAFHNNSIK 235 (758)
T ss_dssp EETTTTEEE-EECCC------CCTTCSSCCEEEEE-EETT---TT-EEEEEEE-EEEEEEETTT-TEEEEEEEEEEEEEE
T ss_pred CccCCCceE-EecCC------CccccccceeEEEE-EECC---CC-EEEEEEC-CCCeEEcCCC-CeEEeccCCCCCeEE
Confidence 888766432 22210 11011122344443 4333 32 4555664 4588888775 332211111234688
Q ss_pred EEEeecCCCeeEEecCCCeEEEEEcCCCce
Q 022870 257 CLSIDESCNGGISGGADQKIVLYNLDHSTV 286 (291)
Q Consensus 257 ~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~ 286 (291)
++..+.++.+.+. +.+| +.+++..++++
T Consensus 236 ~i~~d~~g~lWig-T~~G-l~~~~~~~~~~ 263 (758)
T 3ott_A 236 SLALDGNGDLLAG-TDNG-LYVYHNDTTPL 263 (758)
T ss_dssp EEEECTTCCEEEE-ETTE-EEEECCTTSCC
T ss_pred EEEEcCCCCEEEE-eCCc-eeEEecCCCcE
Confidence 8888888875544 4444 77888766543
No 326
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.90 E-value=1.8 Score=33.91 Aligned_cols=31 Identities=23% Similarity=0.299 Sum_probs=23.8
Q ss_pred ceEEEEEeecCCCCeEEEEeCCCeEEEEECCCC
Q 022870 64 GIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96 (291)
Q Consensus 64 ~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 96 (291)
.-+.|+|.| +|.++++--..|.|++++...+
T Consensus 33 ~P~~ia~~p--dG~llVter~~G~I~~v~~~~g 63 (347)
T 3das_A 33 SPWGLAPLP--GGDLLVSSRDEATITRVDAKTG 63 (347)
T ss_dssp SEEEEEECT--TSCEEEEETTTCEEEEECTTTC
T ss_pred CceEEEEcC--CCcEEEEEecCCEEEEEECCCC
Confidence 378999999 9876666555899999876544
No 327
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.79 E-value=1.9 Score=33.84 Aligned_cols=28 Identities=18% Similarity=0.293 Sum_probs=22.1
Q ss_pred eEEEEEeecCCCCeEEEEeCCCeEEEEECC
Q 022870 65 IVSVATGPSIGLNKVISQGRDGTVKCWDIE 94 (291)
Q Consensus 65 v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 94 (291)
...|+|.| +|+.|+.+...|.|++++..
T Consensus 20 P~~i~~~p--dG~~l~V~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 20 PWALAFLP--DNHGMLITLRGGELRHWQAG 47 (353)
T ss_dssp EEEEEECS--TTCCEEEEETTTEEEEEETT
T ss_pred cEEEEEcC--CCCEEEEEeCCceEEEEeCC
Confidence 68999999 98735566678999999853
No 328
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.73 E-value=1.8 Score=33.24 Aligned_cols=67 Identities=18% Similarity=0.198 Sum_probs=33.6
Q ss_pred CCCCEEEEecC----CC-------eEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC-------CeEE
Q 022870 28 QTKPILFAGTT----GG-------ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD-------GTVK 89 (291)
Q Consensus 28 ~~~~~l~s~~~----dg-------~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-------g~i~ 89 (291)
.++.+++.|+. ++ .+.+||..+.+-...-..... ..-.+++.. ++..++.|+.+ ..+.
T Consensus 55 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 55 QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA-RCLFGLGEV---DDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC-BCSCEEEEE---TTEEEEEEEEBTTTCCEEEEEE
T ss_pred ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc-ccccceEEE---CCEEEEEcCccCCCCcccceEE
Confidence 45667777773 12 277888876654322111111 111222222 34666677654 2477
Q ss_pred EEECCCCCC
Q 022870 90 CWDIENGGL 98 (291)
Q Consensus 90 iwd~~~~~~ 98 (291)
+||..+.+.
T Consensus 131 ~yd~~~~~W 139 (318)
T 2woz_A 131 CYDPVAAKW 139 (318)
T ss_dssp EEETTTTEE
T ss_pred EEeCCCCCE
Confidence 788776643
No 329
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.69 E-value=0.39 Score=37.54 Aligned_cols=108 Identities=12% Similarity=0.189 Sum_probs=62.7
Q ss_pred ecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCC-CCCceEEEee-cCCCcEEEEEccCCCCc
Q 022870 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSK-SQGFVNVLAG-YEDGSILVWDIRNPGIP 244 (291)
Q Consensus 167 ~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~g~~~l~~g-~~dg~i~vwd~~~~~~~ 244 (291)
.++.||.|.-+|..+++..-+++... ........ .|.. .++. .++.. +.||.|+.+|..+ +..
T Consensus 15 v~t~dG~l~Ald~~tG~~~W~~~~~~-----------~~p~~~~~--~~~~~~~~~-~~vv~p~~dG~l~a~~~~~-G~~ 79 (339)
T 2be1_A 15 AADVEGGLHAVDRRNGHIIWSIEPEN-----------FQPLIEIQ--EPSRLETYE-TLIIEPFGDGNIYYFNAHQ-GLQ 79 (339)
T ss_dssp EEETTSCEEEEETTTTEEEEEECGGG-----------SCCSEECC--CSCTTTSSE-EEEECCSTTTEEEEEETTT-EEE
T ss_pred EEeCCCeEEEEECCCCcEEEEecCCc-----------cCCcEEec--CCccccCCc-EEEEEECCCCEEEEEECCC-CcE
Confidence 45669999999999999998887410 01111110 1110 1133 34343 6899999999887 433
Q ss_pred eeeccc----cccceeE---EEe-e----cCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 245 LTAMKV----HLEPVLC---LSI-D----ESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 245 ~~~~~~----h~~~v~~---~~~-~----~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
...+.. ...++.. ... + ..+..+++|+.+|.+...|+++|+.+..
T Consensus 80 ~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~ 136 (339)
T 2be1_A 80 KLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISA 136 (339)
T ss_dssp EEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEE
T ss_pred EeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEE
Confidence 222221 1112221 000 0 0344688999999999999999988754
No 330
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.29 E-value=2.4 Score=33.34 Aligned_cols=74 Identities=15% Similarity=0.066 Sum_probs=44.9
Q ss_pred ccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCe-EEEEEee-ecCCcceEEEEEeecCC---CCeEEEEeC----C---
Q 022870 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR-TVSSSWV-HSAAHGIVSVATGPSIG---LNKVISQGR----D--- 85 (291)
Q Consensus 18 ~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~-~~~~~~v~~~~~~~~~~---~~~l~s~~~----d--- 85 (291)
-.....|+|.|+|+++++ ..+|.|+++| .+++ .+..+.. .........|+++| + +..|+.+.. +
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~p--df~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHP--EFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECT--TTTTSCEEEEEEEEECGGGCE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCC--CCCcCCEEEEEEeccCCCCCc
Confidence 345689999999975555 5569999997 4555 2222110 11123488999999 6 445554332 2
Q ss_pred -CeEEEEECCC
Q 022870 86 -GTVKCWDIEN 95 (291)
Q Consensus 86 -g~i~iwd~~~ 95 (291)
..|..|+...
T Consensus 104 ~~~v~r~~~~~ 114 (354)
T 3a9g_A 104 RNRVIRGRLDG 114 (354)
T ss_dssp EEEEEEEEECS
T ss_pred ceEEEEEEECC
Confidence 4566666654
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.79 E-value=0.64 Score=33.78 Aligned_cols=108 Identities=7% Similarity=-0.092 Sum_probs=55.5
Q ss_pred cccCCCCCcEEEEecCCcCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCCCcE
Q 022870 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 233 (291)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg~i 233 (291)
++|+|+|. +.++ .+|.+.-.+..+.+...-+...... +... -.. -.++. |.|+ |. |.+. .||.|
T Consensus 46 laf~P~G~-LYaV---~~G~Ly~~~~~t~~~~~W~~s~t~I---G~~G-w~~-F~a~~-fD~~---G~--LYav-~dG~i 109 (236)
T 1tl2_A 46 LFLSPGGE-LYGV---LNDKIYKGTPPTHDNDNWMGRAKKI---GNGG-WNQ-FQFLF-FDPN---GY--LYAV-SKDKL 109 (236)
T ss_dssp EEECTTSC-EEEE---ETTEEEEESCCCSTTCCHHHHCEEE---ECSC-GGG-CSEEE-ECTT---SC--EEEE-ETTEE
T ss_pred EEECCCcc-EEEE---eCCeEEEECCCCCCcccccccccEe---cccc-ccc-ceEEE-ECCC---CC--EEEe-CCCEE
Confidence 88999875 5654 3577777776553221111100000 0000 011 23343 8887 53 4444 66999
Q ss_pred EEEEccCCCCceeeccc------cccceeEEEeecCCCeeEEecCCCeEEEE
Q 022870 234 LVWDIRNPGIPLTAMKV------HLEPVLCLSIDESCNGGISGGADQKIVLY 279 (291)
Q Consensus 234 ~vwd~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~s~s~dg~i~vw 279 (291)
+-++-.+.+.--..-.+ -=..+..|.++|+|.+.+.. |+.++-+
T Consensus 110 yr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~ 159 (236)
T 1tl2_A 110 YKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKA 159 (236)
T ss_dssp EEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEE
T ss_pred EEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEec
Confidence 88876431221110000 11467899999999865555 7775433
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.73 E-value=2.6 Score=32.27 Aligned_cols=61 Identities=15% Similarity=0.147 Sum_probs=32.7
Q ss_pred EEEEecCCCeEEEEeCCCCeEEEEEeeecC-CcceEEEEEeecCCCCeEEEEeC----C-------CeEEEEECCCCCC
Q 022870 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHSA-AHGIVSVATGPSIGLNKVISQGR----D-------GTVKCWDIENGGL 98 (291)
Q Consensus 32 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~~~----d-------g~i~iwd~~~~~~ 98 (291)
+++.|+ ..+.+||..+++-.. ...... +..-.+++. . ++..++.|+. + ..+..||..+.+.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVT-K--ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEEC-T--TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEE-E--CCEEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 455666 579999998876432 221110 111223332 3 5577777773 1 1267788776643
No 333
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=92.70 E-value=3.5 Score=37.33 Aligned_cols=38 Identities=16% Similarity=0.196 Sum_probs=33.4
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEe
Q 022870 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW 57 (291)
Q Consensus 20 ~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 57 (291)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56777777888899999999999999999999988765
No 334
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.45 E-value=3.2 Score=32.58 Aligned_cols=51 Identities=8% Similarity=0.001 Sum_probs=31.8
Q ss_pred CceEEEeecCCCcEEEEEccCCCCc-----eeeccccccceeEEEeecCCCeeEEec
Q 022870 220 GFVNVLAGYEDGSILVWDIRNPGIP-----LTAMKVHLEPVLCLSIDESCNGGISGG 271 (291)
Q Consensus 220 g~~~l~~g~~dg~i~vwd~~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~s~s 271 (291)
|. ++++....+.|...++...+.. ...+..-...+..++++|+|.++++..
T Consensus 278 G~-l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 278 GD-LYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp TE-EEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CE-EEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 44 5566666778888887752221 122212235789999999997666653
No 335
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.22 E-value=2.4 Score=38.35 Aligned_cols=36 Identities=11% Similarity=0.124 Sum_probs=31.4
Q ss_pred ceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 254 ~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
.+.+++..++..++++-+.|+++|+|++.+++++.+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 456777788888999999999999999999998865
No 336
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=91.03 E-value=4.4 Score=31.33 Aligned_cols=67 Identities=12% Similarity=-0.010 Sum_probs=37.0
Q ss_pred ccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeee--cCCcceEEEEEeecCCCCeEEEEeCCCeEEE
Q 022870 18 RASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVH--SAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (291)
Q Consensus 18 ~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~i 90 (291)
...+.++.|.+++..++. +.+|.|. ...+.++.=..+... .....+.++.+.+ + . ++.++.++.|..
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~-~-~~~~g~~g~i~~ 103 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG--N-E-GWIVGEPPIMLH 103 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET--T-E-EEEEEETTEEEE
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC--C-e-EEEEECCCeEEE
Confidence 457999999877767775 4567653 333334321111111 1113588999876 3 3 444556675543
No 337
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.52 E-value=6.3 Score=32.24 Aligned_cols=71 Identities=10% Similarity=0.096 Sum_probs=43.5
Q ss_pred eEEecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEE--EEeee----cCCcceEEEEEeecCC---CCeEEE
Q 022870 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVS--SSWVH----SAAHGIVSVATGPSIG---LNKVIS 81 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~~~----~~~~~v~~~~~~~~~~---~~~l~s 81 (291)
+..+..--...+.|+|.|+|+++++-...+.|++++..+++... .+... ........|+|+| + +..|+.
T Consensus 19 ~~~~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~P--df~~~g~lYv 96 (454)
T 1cru_A 19 KKVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHP--DFKNNPYIYI 96 (454)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECT--TTTTSCEEEE
T ss_pred EEEEECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECC--CcCcCCEEEE
Confidence 33443333456799999999877776554579888865554322 22110 1224578999998 5 555554
Q ss_pred Ee
Q 022870 82 QG 83 (291)
Q Consensus 82 ~~ 83 (291)
+.
T Consensus 97 ~~ 98 (454)
T 1cru_A 97 SG 98 (454)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 338
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.17 E-value=8.8 Score=33.39 Aligned_cols=55 Identities=9% Similarity=0.001 Sum_probs=29.7
Q ss_pred CcEEEEEccCCCCc-----eeeccc---cccceeEEEeecCCCeeEEecC--------CCeEEEEEcCCCce
Q 022870 231 GSILVWDIRNPGIP-----LTAMKV---HLEPVLCLSIDESCNGGISGGA--------DQKIVLYNLDHSTV 286 (291)
Q Consensus 231 g~i~vwd~~~~~~~-----~~~~~~---h~~~v~~~~~~~~~~~l~s~s~--------dg~i~vw~~~~~~~ 286 (291)
..+.+||+.+ ..- ...+.. ....-.+++...++.+++.|+. ...+.+||+.+.+-
T Consensus 568 ~~v~~yd~~~-~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 568 DKAIIFKYDA-ENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp CEEEEEEECT-TCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred CcEEEEEccC-CccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 4699999987 431 111111 1111123333343567777774 34689999987654
No 339
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=89.75 E-value=5.5 Score=30.45 Aligned_cols=60 Identities=12% Similarity=0.082 Sum_probs=30.9
Q ss_pred EEEEecCCCeEEEEeCCCCeEEEEEeeec-CCcceEEEEEeecCCCCeEEEEeC----CC-------eEEEEECCCCC
Q 022870 32 ILFAGTTGGELRIWDTVQHRTVSSSWVHS-AAHGIVSVATGPSIGLNKVISQGR----DG-------TVKCWDIENGG 97 (291)
Q Consensus 32 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~----dg-------~i~iwd~~~~~ 97 (291)
+++.|+. .+..||..+.+-.. ..... .+..-.+++ .. ++..++.|+. ++ .+..||..+.+
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~-~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~ 89 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYL-TALAEQIPRNHSSIV-TQ--QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSE 89 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEE-EEECTTSCSSEEEEE-CS--SSCEEEEESSCC-------CCCBEEEEEETTTTE
T ss_pred hhhcccc--ceEEECCCCCceec-ccCCccCCccceEEE-EE--CCEEEEECCcccCccccCCCccccEEEEeCCCCc
Confidence 4555654 48899998876543 22211 111122333 23 4567777773 11 16677776654
No 340
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.48 E-value=2.1 Score=35.95 Aligned_cols=107 Identities=11% Similarity=0.158 Sum_probs=62.6
Q ss_pred cccCCCCCcEEEEecCCcCeEEEEeCCCcceee-----EecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeec
Q 022870 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCT-----RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY 228 (291)
Q Consensus 154 ~~~~~~~~~~~~~~g~~d~~i~~wd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~ 228 (291)
+.++|||+++++ +|-.+.++.++|++...... ..+. +.. +......+ ..-.+ |.++ |. ...+-.
T Consensus 328 v~vsPDGkyi~v-~GKLsptvtV~d~~k~~~~~~~k~~~~~~-~~~---ae~e~GlG-PlHt~-Fd~~---G~-aYTtlf 396 (638)
T 3sbq_A 328 CNTSSDGKYFIA-AGKLSPTCSMIAIDKLPDLFAGKLADPRD-VIV---GEPELGLG-PLHTT-FDGR---GN-AYTTLF 396 (638)
T ss_dssp EEECTTSCEEEE-ECTTSSBEEEEEGGGHHHHHTTCCSCGGG-GEE---ECCBCCSC-EEEEE-ECSS---SE-EEEEET
T ss_pred eeeCCCCCEEEE-cCCCCCeEEEEEeehhhhhhhccccCccc-ceE---eeccCCCc-ccEEE-ECCC---Cc-eEeeee
Confidence 888999988776 68789999999998432100 0000 000 01011122 23333 8887 53 666777
Q ss_pred CCCcEEEEEccCC---------CCceeeccccccceeEEE-----eecCCCeeEEec
Q 022870 229 EDGSILVWDIRNP---------GIPLTAMKVHLEPVLCLS-----IDESCNGGISGG 271 (291)
Q Consensus 229 ~dg~i~vwd~~~~---------~~~~~~~~~h~~~v~~~~-----~~~~~~~l~s~s 271 (291)
-|..|.-|++... ...+..+.-|-.+-...+ -.++|++|++..
T Consensus 397 idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 397 IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred ecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 8999999999751 134455555544433322 267888888764
No 341
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=89.28 E-value=6.7 Score=30.75 Aligned_cols=68 Identities=21% Similarity=0.320 Sum_probs=39.7
Q ss_pred eEEecCCccceeEEEEcCCCC-EEEEecCCCeEEEEeCCCCeEEEEEee-----ecCCcceEEEEEeecCC---CCeEEE
Q 022870 11 VAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWV-----HSAAHGIVSVATGPSIG---LNKVIS 81 (291)
Q Consensus 11 ~~~l~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~---~~~l~s 81 (291)
+..+...-.....|+|.|+|+ +++ +...|.|++++. ++.....+.. .........|+++| + +..|+.
T Consensus 10 ~~~va~~l~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~p--df~~~g~lYv 85 (353)
T 2g8s_A 10 VEVLQDKLDHPWALAFLPDNHGMLI-TLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAP--DFAQSRRIWL 85 (353)
T ss_dssp EEEEEEEESSEEEEEECSTTCCEEE-EETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECT--THHHHCEEEE
T ss_pred EEEEECCCCCcEEEEEcCCCCEEEE-EeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECC--CCCCCCEEEE
Confidence 333333334568999999998 555 456799999985 3432211110 11123478999998 5 444444
Q ss_pred E
Q 022870 82 Q 82 (291)
Q Consensus 82 ~ 82 (291)
.
T Consensus 86 ~ 86 (353)
T 2g8s_A 86 S 86 (353)
T ss_dssp E
T ss_pred E
Confidence 3
No 342
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.14 E-value=2.9 Score=35.13 Aligned_cols=68 Identities=16% Similarity=0.080 Sum_probs=48.7
Q ss_pred ecCCCCCCceEEEeecCCCcEEEEEccCC-----CCc-------eeeccccccceeEEEeecCCCeeEEecCCCeEEEEE
Q 022870 213 YLPSKSQGFVNVLAGYEDGSILVWDIRNP-----GIP-------LTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYN 280 (291)
Q Consensus 213 ~~p~~~~g~~~l~~g~~dg~i~vwd~~~~-----~~~-------~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~ 280 (291)
.+|+ |++.+++|-.+.++.|+|.+.. .+. +.+... .-.....+|+++|+...|.--|..|.-|+
T Consensus 330 vsPD---Gkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 330 TSSD---GKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp ECTT---SCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred eCCC---CCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeecceEEEEe
Confidence 7887 7767777788999999998831 111 222222 23456789999997667777899999999
Q ss_pred cCCC
Q 022870 281 LDHS 284 (291)
Q Consensus 281 ~~~~ 284 (291)
+...
T Consensus 406 i~~a 409 (638)
T 3sbq_A 406 MEEA 409 (638)
T ss_dssp HHHH
T ss_pred ccHH
Confidence 9753
No 343
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=88.86 E-value=7.2 Score=30.59 Aligned_cols=51 Identities=14% Similarity=0.076 Sum_probs=33.6
Q ss_pred CceEEEeecCCCcEEEEEccCCCCce--ee-ccccccceeEEEeecCCCeeEEec
Q 022870 220 GFVNVLAGYEDGSILVWDIRNPGIPL--TA-MKVHLEPVLCLSIDESCNGGISGG 271 (291)
Q Consensus 220 g~~~l~~g~~dg~i~vwd~~~~~~~~--~~-~~~h~~~v~~~~~~~~~~~l~s~s 271 (291)
|. ++++....+.|...++...+... .. +.+-...+..+++.|+|.+.++..
T Consensus 277 G~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 277 GW-LLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp TE-EEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred Cc-EEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 54 66666777889999987522322 12 222245789999999997666654
No 344
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=88.21 E-value=12 Score=32.48 Aligned_cols=67 Identities=13% Similarity=0.113 Sum_probs=37.9
Q ss_pred CCCEEEEecCC------CeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCC--eEEEEECCCCCC
Q 022870 29 TKPILFAGTTG------GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG--TVKCWDIENGGL 98 (291)
Q Consensus 29 ~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~ 98 (291)
++.+++.|+.+ ..+.+||..+.+-...-..... ..-.+++... ++..++.|+.++ .+.+||..+...
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~-R~~h~~~~~~--~~~iyv~GG~~~~~~v~~yd~~t~~W 525 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT-RFRHSACSLP--DGNVLILGGVTEGPAMLLYNVTEEIF 525 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC-CBSCEEEECT--TSCEEEECCBCSSCSEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC-cccceEEEEc--CCEEEEECCCCCCCCEEEEECCCCce
Confidence 66677777654 3578889877543322111111 1122333333 557777887655 688899887643
No 345
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=87.37 E-value=2.5 Score=39.18 Aligned_cols=36 Identities=11% Similarity=0.124 Sum_probs=30.3
Q ss_pred ceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 254 ~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
.+.+++..++..++++-+.|+++|+|++.+++++.+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 345556677888999999999999999999998865
No 346
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=86.22 E-value=11 Score=29.63 Aligned_cols=81 Identities=12% Similarity=0.072 Sum_probs=49.2
Q ss_pred EecCCccceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEE--EEe--eecCCcceEEEEEeecCC---CCeEEEE---
Q 022870 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVS--SSW--VHSAAHGIVSVATGPSIG---LNKVISQ--- 82 (291)
Q Consensus 13 ~l~~h~~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~--~~~~~~~v~~~~~~~~~~---~~~l~s~--- 82 (291)
.+..--..-+.|+|.|+|.++++--..|.|++++..+++... .+. ..........|+++| + ...|+..
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~P--df~~~g~lYv~yt~ 103 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSP--DYASDHMVYAYFTS 103 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECT--THHHHCEEEEEEEC
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEecc--ccccCCEEEEEEec
Confidence 333334567899999999888877668999999866554322 111 011224589999998 4 2334332
Q ss_pred eCCCeEEEEECCC
Q 022870 83 GRDGTVKCWDIEN 95 (291)
Q Consensus 83 ~~dg~i~iwd~~~ 95 (291)
..++.|.-|.+..
T Consensus 104 ~~~~~v~R~~~~~ 116 (347)
T 3das_A 104 ASDNRIVRMLYDE 116 (347)
T ss_dssp SSSEEEEEEEBCT
T ss_pred CCCCEEEEEEeCC
Confidence 2344555555544
No 347
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=83.64 E-value=2.9 Score=30.42 Aligned_cols=69 Identities=3% Similarity=-0.135 Sum_probs=42.3
Q ss_pred cceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeE------EEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEE
Q 022870 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRT------VSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (291)
Q Consensus 19 ~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd 92 (291)
..+..++|+|+|.+.+. .+|.+.-.+..+... -..+ +...-..-.++.|.| +|.+.++ .||.|.-++
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~I-G~~Gw~~F~a~~fD~--~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKI-GNGGWNQFQFLFFDP--NGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEE-ECSCGGGCSEEEECT--TSCEEEE--ETTEEEEES
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEe-cccccccceEEEECC--CCCEEEe--CCCEEEEeC
Confidence 46789999999975555 678766666544111 1111 111111247888999 8666666 569888776
Q ss_pred CC
Q 022870 93 IE 94 (291)
Q Consensus 93 ~~ 94 (291)
-.
T Consensus 114 pP 115 (236)
T 1tl2_A 114 PP 115 (236)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=82.54 E-value=13 Score=30.55 Aligned_cols=114 Identities=10% Similarity=0.038 Sum_probs=55.4
Q ss_pred cccCCCCC-cEEEEecCCcCeEEEEeCCCcc---eeeEecccccCCCCCCCCCcceeeeeEEEecCCCC-CCceEEEeec
Q 022870 154 DDVPAEGP-KYMAVAGEQLSEVEIWDLNTAE---RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS-QGFVNVLAGY 228 (291)
Q Consensus 154 ~~~~~~~~-~~~~~~g~~d~~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~g~~~l~~g~ 228 (291)
++|.|+|. +++++ ...|.|++++..... .+..+.... ..+.......-.+.++ |+|+-. ++..|++-..
T Consensus 19 ~a~~pdG~~rl~V~--er~G~i~~~~~~g~~~~~~~~~~~~~~---~~g~~~~~e~Gllgia-~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 19 ALHSGDGSQRLFIL--EKEGYVKILTPEGEIFKEPYLDIHKLV---QSGIKGGDERGLLSLA-FHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp EECCSSSSCCEEEE--ETTTEEEEECTTSCBCSSCSEECTTTB---CCCCSSSCCCSEEEEE-ECTTHHHHCEEEEEEEE
T ss_pred EEECCCCCeEEEEE--eCCceEEEEeCCCCeeeeeecCCccee---ccCccccCCCcceeeE-eCCCCcCCCEEEEEEeC
Confidence 77899986 56643 357999999754321 222222100 0000001123456776 998611 1332333222
Q ss_pred C-C----------CcEEEEEccCC---------CCceeecc--ccccceeEEEeecCCCeeEEecCC
Q 022870 229 E-D----------GSILVWDIRNP---------GIPLTAMK--VHLEPVLCLSIDESCNGGISGGAD 273 (291)
Q Consensus 229 ~-d----------g~i~vwd~~~~---------~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~d 273 (291)
. + ..|.-|.+... .+.+..+. ........|+|.|||.+.++.++.
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 1 13444555421 11222221 112345789999999877776654
No 349
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=82.52 E-value=1.7 Score=40.24 Aligned_cols=39 Identities=15% Similarity=0.206 Sum_probs=32.8
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEee
Q 022870 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV 58 (291)
Q Consensus 20 ~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 58 (291)
.+.+++..++..++++-+.|+++|+|++.+++++.+...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 455666677888999999999999999999999888653
No 350
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=80.49 E-value=12 Score=32.34 Aligned_cols=80 Identities=11% Similarity=0.194 Sum_probs=47.8
Q ss_pred CceEEecCCccceeEEEEc----CCC--CEEEEecCCCeEE-EEeCCCCe-------EEEEEeeecCCcceEEEEEeecC
Q 022870 9 DPVAVLRGHRASVTDVCFH----QTK--PILFAGTTGGELR-IWDTVQHR-------TVSSSWVHSAAHGIVSVATGPSI 74 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~----~~~--~~l~s~~~dg~v~-iwd~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~ 74 (291)
+|+....+.....+.++.+ +++ ..++.|+.+|.|+ +.....+. .+..+.......+|..|.+++
T Consensus 402 ~Pll~~~~~~~~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~-- 479 (667)
T 4gz8_A 402 RPIMIKTDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELST-- 479 (667)
T ss_dssp SCSEEECSSSCCEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEET--
T ss_pred CceEEEcCcccceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcC--
Confidence 4444444433345556553 234 3577899999875 33222211 233344434446799999999
Q ss_pred CCCeEEEEeCCCeEEE
Q 022870 75 GLNKVISQGRDGTVKC 90 (291)
Q Consensus 75 ~~~~l~s~~~dg~i~i 90 (291)
+...|+.++.++.+++
T Consensus 480 ~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 480 KQQQLYIGSTAGVAQL 495 (667)
T ss_dssp TTTEEEEEBSSCEEEE
T ss_pred CCCEEEEEECCEEEEE
Confidence 8889999998876654
No 351
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=80.38 E-value=4.2 Score=35.25 Aligned_cols=38 Identities=18% Similarity=0.281 Sum_probs=31.4
Q ss_pred cceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEee
Q 022870 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWV 58 (291)
Q Consensus 19 ~~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 58 (291)
..|.++.+ +..++++-+.|.++|+|++.+++++.+...
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 45666665 356999999999999999999999888765
No 352
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=78.67 E-value=13 Score=31.51 Aligned_cols=58 Identities=5% Similarity=0.034 Sum_probs=41.0
Q ss_pred eEEEEcCCCCEEEEecCC------------CeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEE
Q 022870 22 TDVCFHQTKPILFAGTTG------------GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (291)
Q Consensus 22 ~~l~~~~~~~~l~s~~~d------------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~ 82 (291)
--|+|+|.|.+++.-..+ ..+.+.+..+++..+-+..+.. ..++.++|+| |++.|+..
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g-aE~TG~~fsp--Dg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG-CEVTGISFSP--DQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT-CEEEEEEECT--TSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC-ccCcCeeECC--CCCEEEEE
Confidence 458899999766543321 3466667777887776666654 6799999999 88777654
No 353
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=78.51 E-value=10 Score=31.36 Aligned_cols=80 Identities=13% Similarity=0.185 Sum_probs=47.2
Q ss_pred CceEEecCCccceeEEEEcC----CC--CEEEEecCCCeEEEEeCC-CCe-------EEEEEeeecCCcceEEEEEeecC
Q 022870 9 DPVAVLRGHRASVTDVCFHQ----TK--PILFAGTTGGELRIWDTV-QHR-------TVSSSWVHSAAHGIVSVATGPSI 74 (291)
Q Consensus 9 ~~~~~l~~h~~~v~~l~~~~----~~--~~l~s~~~dg~v~iwd~~-~~~-------~~~~~~~~~~~~~v~~~~~~~~~ 74 (291)
+++....+-....++|+... ++ ..++.|+.+|.|+-.-+. .+. .+..+.......+|..|.+++
T Consensus 394 ~Pll~~~~~~~~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~-- 471 (495)
T 1q47_A 394 RPIMIKTDVNYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELST-- 471 (495)
T ss_dssp SCSEEESSSSSCEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEET--
T ss_pred ccEEEecCCccceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcC--
Confidence 34444332222466666553 23 357789999987544332 211 233344332236799999999
Q ss_pred CCCeEEEEeCCCeEEE
Q 022870 75 GLNKVISQGRDGTVKC 90 (291)
Q Consensus 75 ~~~~l~s~~~dg~i~i 90 (291)
+...|+.++.++.++|
T Consensus 472 ~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 472 KQQQLYIGSTAGVAQL 487 (495)
T ss_dssp TTTEEEEEBSSCEEEE
T ss_pred CCCEEEEEECCeEEEE
Confidence 8889999998876654
No 354
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=77.90 E-value=6.4 Score=33.01 Aligned_cols=69 Identities=14% Similarity=0.103 Sum_probs=44.2
Q ss_pred ceeEEEEcC--CCCEEEEecCCCeEEEEeCCCC----eEEEEEeeecCCcceE-EEEEeecCCCCeEEEEeCCCeEEE
Q 022870 20 SVTDVCFHQ--TKPILFAGTTGGELRIWDTVQH----RTVSSSWVHSAAHGIV-SVATGPSIGLNKVISQGRDGTVKC 90 (291)
Q Consensus 20 ~v~~l~~~~--~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~s~~~dg~i~i 90 (291)
..++++... +-..++.|..+|.|.-..+... ..+..+.......+|. .|.+++ +...|+.++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~--~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSI--NQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECT--TSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEcc--CCCeEEEEecccccee
Confidence 466676655 3346788999998865544322 2344444333225685 899999 7789999888765543
No 355
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=77.62 E-value=3.8 Score=35.49 Aligned_cols=34 Identities=12% Similarity=0.063 Sum_probs=27.6
Q ss_pred ceeEEEeecCCCeeEEecCCCeEEEEEcCCCceeee
Q 022870 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTVSHC 289 (291)
Q Consensus 254 ~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~~~~~~~ 289 (291)
.|.++.++ ..+|++-+.|.++|+|++++++++.+
T Consensus 223 ~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 223 VISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp EEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 45555554 55999999999999999999998765
No 356
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=76.11 E-value=31 Score=28.28 Aligned_cols=53 Identities=15% Similarity=0.153 Sum_probs=32.9
Q ss_pred ceeEEEEcCCCC-EEEEecCCCeEEEEeCCCC---eEEEEEee--e-----cCCcceEEEEEee
Q 022870 20 SVTDVCFHQTKP-ILFAGTTGGELRIWDTVQH---RTVSSSWV--H-----SAAHGIVSVATGP 72 (291)
Q Consensus 20 ~v~~l~~~~~~~-~l~s~~~dg~v~iwd~~~~---~~~~~~~~--~-----~~~~~v~~~~~~~ 72 (291)
.-+.|+|.|+|. .|+.+...|.|++++.... ..+..+.. . ........|+|+|
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P 78 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHP 78 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCC
Confidence 457899999986 4545567899999975422 12222210 0 0124588999998
No 357
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=73.76 E-value=9.1 Score=31.94 Aligned_cols=68 Identities=13% Similarity=0.150 Sum_probs=43.7
Q ss_pred ceeEEEEcC-CC-CEEEEecCCCeEEEEeCC-C--CeEEEEEeeecCCcceE-EEEEeecCCCCeEEEEeCCCeEEE
Q 022870 20 SVTDVCFHQ-TK-PILFAGTTGGELRIWDTV-Q--HRTVSSSWVHSAAHGIV-SVATGPSIGLNKVISQGRDGTVKC 90 (291)
Q Consensus 20 ~v~~l~~~~-~~-~~l~s~~~dg~v~iwd~~-~--~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~s~~~dg~i~i 90 (291)
..+.++... ++ ..++.|+.+|.|+-.-+. . ...+..+.. ....+|. .+.+++ +...|+.++.++.+++
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~--~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDG--TFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECT--TSSEEEEECSSCEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEec--CCCEEEEEeCCEEEEE
Confidence 467777665 33 456788999998744432 2 123344444 2225684 899988 7788999888876664
No 358
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=70.94 E-value=34 Score=26.44 Aligned_cols=21 Identities=10% Similarity=-0.107 Sum_probs=14.9
Q ss_pred CcEEEEecCCcCeEEEEeCCC
Q 022870 161 PKYMAVAGEQLSEVEIWDLNT 181 (291)
Q Consensus 161 ~~~~~~~g~~d~~i~~wd~~~ 181 (291)
..+++..|.....+.+||+..
T Consensus 20 ~~iyv~GG~~~~~~~~~d~~~ 40 (357)
T 2uvk_A 20 DTVYIGLGSAGTAWYKLDTQA 40 (357)
T ss_dssp TEEEEECGGGTTCEEEEETTS
T ss_pred CEEEEEeCcCCCeEEEEcccc
Confidence 456666666556799999874
No 359
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=69.88 E-value=41 Score=28.51 Aligned_cols=62 Identities=6% Similarity=0.026 Sum_probs=41.9
Q ss_pred cceeEEEEcCCCCEEE-EecC-----------CCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEe
Q 022870 19 ASVTDVCFHQTKPILF-AGTT-----------GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (291)
Q Consensus 19 ~~v~~l~~~~~~~~l~-s~~~-----------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~ 83 (291)
.....|.|.++|.+.+ +=.. ...|..++..+++....+..... ..++.++|+| |++.|+.+-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~-aEpnGiafSP--D~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG-CEVTGISFSP--DQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT-CEEEEEEECT--TSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC-ccccCCEECC--CCCEEEEEE
Confidence 3456799999997766 3221 22577777777876665544322 3489999999 988877654
No 360
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=66.19 E-value=27 Score=30.32 Aligned_cols=69 Identities=14% Similarity=0.083 Sum_probs=43.4
Q ss_pred ceeEEEEcC--CCCEEEEecCCCeEEEEeCCC----CeEEEEEeeecCCcce-EEEEEeecCCCCeEEEEeCCCeEEE
Q 022870 20 SVTDVCFHQ--TKPILFAGTTGGELRIWDTVQ----HRTVSSSWVHSAAHGI-VSVATGPSIGLNKVISQGRDGTVKC 90 (291)
Q Consensus 20 ~v~~l~~~~--~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~l~s~~~dg~i~i 90 (291)
..+.++... +-..++.|+.+|.|+-.-+.. ...+..+.......+| ..+.+++ +...|+.++.++.+++
T Consensus 400 ~lT~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~--~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 400 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSI--NQLYLYVMSERQVTRV 475 (681)
T ss_dssp CBCCCEEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECT--TSSEEEEECSSEEEEE
T ss_pred ceEEEEEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcC--CCCEEEEEecCEEEEE
Confidence 355555554 334678899999987544432 2233444333222557 6899998 7788888888776665
No 361
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=61.04 E-value=45 Score=28.16 Aligned_cols=81 Identities=11% Similarity=0.114 Sum_probs=48.5
Q ss_pred CCceEEecCCccceeEEEEcC----C--CCEEEEecCCCeEE-EEeCCC-------CeEEEEEeeec---------CCcc
Q 022870 8 PDPVAVLRGHRASVTDVCFHQ----T--KPILFAGTTGGELR-IWDTVQ-------HRTVSSSWVHS---------AAHG 64 (291)
Q Consensus 8 ~~~~~~l~~h~~~v~~l~~~~----~--~~~l~s~~~dg~v~-iwd~~~-------~~~~~~~~~~~---------~~~~ 64 (291)
.+|+..-.+..-..+.|+... + -..++.|+.+|.|+ +..... ...+..+.... ...+
T Consensus 392 ~~Pll~~~~~~y~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~p 471 (565)
T 3oky_B 392 NRPWFLRTMVRYRLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKR 471 (565)
T ss_dssp GSCSEEECSSSSCEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCC
T ss_pred ceeEEEEcCCccceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCc
Confidence 345544444333467777664 2 24678899999984 443221 11233333211 1256
Q ss_pred eEEEEEeecCCCCeEEEEeCCCeEEE
Q 022870 65 IVSVATGPSIGLNKVISQGRDGTVKC 90 (291)
Q Consensus 65 v~~~~~~~~~~~~~l~s~~~dg~i~i 90 (291)
|..|.+++ +...|+.++.++.+++
T Consensus 472 I~~L~ls~--~~~~LYV~s~~~V~qV 495 (565)
T 3oky_B 472 IMGMQLDR--ASGSLYVAFSTCVIKV 495 (565)
T ss_dssp CCEEEEEG--GGTEEEEECSSCEEEE
T ss_pred eEEEEEcC--CCCEEEEEecCeEEEe
Confidence 89999998 7788999998877665
No 362
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=60.97 E-value=85 Score=27.45 Aligned_cols=56 Identities=13% Similarity=0.133 Sum_probs=34.5
Q ss_pred CCCcEEEEEccCCC------Cceee-ccc-cccceeEEEeecCCCeeEEecCCCe--EEEEEcCCCc
Q 022870 229 EDGSILVWDIRNPG------IPLTA-MKV-HLEPVLCLSIDESCNGGISGGADQK--IVLYNLDHST 285 (291)
Q Consensus 229 ~dg~i~vwd~~~~~------~~~~~-~~~-h~~~v~~~~~~~~~~~l~s~s~dg~--i~vw~~~~~~ 285 (291)
..+.|.+.|+.++. ..... +.. ....+.++.|..+ .++++...++. ++++++.+++
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTE
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCc
Confidence 47789999987621 12222 222 2346778888876 45666666764 6777766553
No 363
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=60.20 E-value=88 Score=27.35 Aligned_cols=71 Identities=14% Similarity=0.155 Sum_probs=43.4
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCC
Q 022870 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG 97 (291)
Q Consensus 20 ~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 97 (291)
.|.++...+++..|..|+. +-+..+|..+++......... ..|.++...+ ++. |..|..+ -|.+++..+.+
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~--~~i~~i~~d~--~g~-lWigT~~-Gl~~~~~~~~~ 262 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHN--NSIKSLALDG--NGD-LLAGTDN-GLYVYHNDTTP 262 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEE--EEEEEEEECT--TCC-EEEEETT-EEEEECCTTSC
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCC--CeEEEEEEcC--CCC-EEEEeCC-ceeEEecCCCc
Confidence 4788887776665555554 458888987765433212222 3488888776 644 4445544 57788876553
No 364
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=57.59 E-value=58 Score=24.44 Aligned_cols=55 Identities=13% Similarity=0.256 Sum_probs=31.8
Q ss_pred EEEeecCCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecCCCeEEEEEcCC
Q 022870 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (291)
Q Consensus 223 ~l~~g~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw~~~~ 283 (291)
.++. .||.|+.|=....++.-.... -...|..|+-......+++ ||.|..|=.+.
T Consensus 192 s~al--~~G~v~~wG~n~~gqlg~p~~-~~~~v~~i~~G~~h~~al~---~g~v~~wG~n~ 246 (282)
T 3qhy_B 192 SLAL--KDGKVIAWGDNRYKQTTVPTE-ALSGVSAIASGEWYSLALK---NGKVIAWGSSR 246 (282)
T ss_dssp EEEE--ETTEEEEEECCTTSTTCCCGG-GGSSCCEEEECSSCEEEEE---TTEEEEESTTC
T ss_pred EEEE--ECCeEEEEECCCCCCCCCCcc-cCCCceEEEcCCCEEEEEE---CCEEEEecCCC
Confidence 3444 599999998765333321111 1235777766555333233 88999986554
No 365
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=51.27 E-value=64 Score=26.75 Aligned_cols=57 Identities=14% Similarity=0.114 Sum_probs=38.2
Q ss_pred eEEEeecCCCcEEEEEccCCC-------Cceeeccc--cccceeEEEeecCCCeeEEecCCCeEEE
Q 022870 222 VNVLAGYEDGSILVWDIRNPG-------IPLTAMKV--HLEPVLCLSIDESCNGGISGGADQKIVL 278 (291)
Q Consensus 222 ~~l~~g~~dg~i~vwd~~~~~-------~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~dg~i~v 278 (291)
..+..|+.+|.|.=.-+.... ..+.++.. ...+|..|.++++..+|..++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 377889999987544332111 12223332 3578999999999999999998887665
No 366
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=50.39 E-value=77 Score=23.74 Aligned_cols=69 Identities=19% Similarity=0.277 Sum_probs=39.6
Q ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEEEECCCCCC
Q 022870 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98 (291)
Q Consensus 20 ~v~~l~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 98 (291)
.|..++..... .++. . ||.|..|-....-.+. +.. .....|..++... . ..++. . ||.|..|-......
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg-~p~-~~~~~i~~ia~G~--~-hs~~l-~-~G~v~~wG~n~~Gq 93 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLT-MPA-ATQSGVDAIAAGN--Y-HSLAL-K-DGEVIAWGGNEDGQ 93 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTS-CCG-GGGSCCCEEEECS--S-EEEEE-E-TTEEEEEECCTTST
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCC-CCc-cCCCCEEEEEeCC--C-EEEEE-E-CCEEEEeeCCCCCC
Confidence 57777765543 3333 4 8999999765422111 111 1113477777665 3 34444 4 89999998765443
No 367
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=48.38 E-value=1e+02 Score=24.52 Aligned_cols=118 Identities=7% Similarity=0.009 Sum_probs=60.4
Q ss_pred EEEEecCCcCeEEEEeCCCcceeeEecccccCCCC-------CCCCCcceeeeeEEEecCCCCCCceEEEeecCCC-cEE
Q 022870 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSP-------NFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG-SIL 234 (291)
Q Consensus 163 ~~~~~g~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~dg-~i~ 234 (291)
++.++-+..+.|.+||+.+++.-+.+... ..+.. |..-....-+..++ .+|+..+|...|.-....+ .++
T Consensus 172 ~aYItD~~~~gLIVydl~~~~swRv~~~~-~~pd~~~~~~i~G~~~~~~~Gi~gIa-Lsp~~~~~~~~LYf~plss~~ly 249 (381)
T 3q6k_A 172 FVYITNFLRGALFIYDHKKQDSWNVTHPT-FKAERPTKFDYGGKEYEFKAGIFGIT-LGDRDSEGNRPAYYLAGSAIKVY 249 (381)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEECGG-GSCCSCEEEEETTEEEEECCCEEEEE-ECCCCTTSCCEEEEEESSCSEEE
T ss_pred EEEEEcCCCCcEEEEECCCCcEEEEccCC-CccccCcceEECCEEeEeccCceEEE-ecCCcCCCCeEEEEEECCCCcEE
Confidence 33345555688999999998766554311 11100 00000012355665 7876443222444333332 343
Q ss_pred EEE---ccCCCCceeec--cccc---cceeEEEee-cCCCeeEEecCCCeEEEEEcCC
Q 022870 235 VWD---IRNPGIPLTAM--KVHL---EPVLCLSID-ESCNGGISGGADQKIVLYNLDH 283 (291)
Q Consensus 235 vwd---~~~~~~~~~~~--~~h~---~~v~~~~~~-~~~~~l~s~s~dg~i~vw~~~~ 283 (291)
-.. +++ ......+ .+.. ..-..++.+ .+|.++++--..+.|..|+.++
T Consensus 250 ~V~T~~L~~-~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 250 SVNTKELKQ-KGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEEHHHHSS-TTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEEHHHhhC-cchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 333 222 1111111 1222 223356676 7888888888889999999886
No 368
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=45.23 E-value=84 Score=26.75 Aligned_cols=58 Identities=10% Similarity=0.055 Sum_probs=37.2
Q ss_pred CEEEEecCCCeEEEEeC-CCC-----eEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEE
Q 022870 31 PILFAGTTGGELRIWDT-VQH-----RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (291)
Q Consensus 31 ~~l~s~~~dg~v~iwd~-~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~i 90 (291)
..++.|+.+|.|+-.-. ..+ -.+..+.......+|..+.+++ +...|+.++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~--~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDA--ERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEET--TTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcC--CCCEEEEEecceEEEc
Confidence 36778999998764333 222 1222333222335699999999 7788999888876665
No 369
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=45.08 E-value=99 Score=23.47 Aligned_cols=213 Identities=7% Similarity=0.001 Sum_probs=98.8
Q ss_pred CCCCEEEEec--CCCeEEEEeCCCCeEEEEEeeecCCcceEEEEEeecCCCCeEEEEeCC--------------CeEEEE
Q 022870 28 QTKPILFAGT--TGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD--------------GTVKCW 91 (291)
Q Consensus 28 ~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d--------------g~i~iw 91 (291)
+++..++-.. .++.|...+.+... ...+... .+-.+++ +++.|+-+... ..|+..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~------~~~~i~~--~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i 93 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND------TAMYINA--DKNYVYYVRNNNQKITSQTFFSYDRNSLCRI 93 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE------EEEEEEE--CSSEEEEEEECC------CCSSCCSEEEEEE
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC------ceeeEEE--cCCEEEEEECCCCcccccceeccCCCeEEEE
Confidence 4555555442 35666666654333 3333322 1234467 77877755442 367777
Q ss_pred ECCCCCCCCCCccccccceEEEEEeecccCccceec-cCCCCceeeecccCccccccCCCCCCcccCCCCCcEEEEecCC
Q 022870 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAK-QANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQ 170 (291)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 170 (291)
++...+.. .+...... .+++......... .......++.+.........+..+...+++|+++.++.+.. .
T Consensus 94 ~~dg~~~~-----~l~~~~~~--~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~~~~~~~g~~iy~t~~-g 165 (302)
T 3s25_A 94 KRNGHGST-----VLDPDPCI--YASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYLFTCNTSDRYFYYNNP-K 165 (302)
T ss_dssp ETTSCCCE-----EEECSCEE--EEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCCCCSEEETTEEEEECT-T
T ss_pred eCCCCcce-----EeecCCcc--EEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCceEeeEECCEEEEEeC-C
Confidence 77766421 11111111 2333333333222 11222333333222111111211212567899988776433 4
Q ss_pred cCeEEEEeCCCcceeeEecccccCCCCCCCCCcceeeeeEEEecCCCCCCceEEEeecCC-CcEEEEEccCCCCceeecc
Q 022870 171 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED-GSILVWDIRNPGIPLTAMK 249 (291)
Q Consensus 171 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~l~~g~~d-g~i~vwd~~~~~~~~~~~~ 249 (291)
...|..-++..+.....+. + ... .. +.|+ +..+..+-..+ ..|..-++.. .....+.
T Consensus 166 ~~~Iy~~~l~g~~~~~l~~--------~-------~~~-~~-~~P~---g~~iy~t~~~~~~~I~~~~ldG--~~~~~Lt 223 (302)
T 3s25_A 166 NGQLYRYDTASQSEALFYD--------C-------NCY-KP-VVLD---DTNVYYMDVNRDNAIVHVNINN--PNPVVLT 223 (302)
T ss_dssp TCCEEEEETTTTEEEEEEC--------S-------CEE-EE-EEEE---TTEEEEEEGGGTTEEEEECSSS--CCCEECS
T ss_pred CceEEEEECCCCCEEEEeC--------C-------Ccc-ce-eeec---CCEEEEEEcCCCcEEEEEECCC--CCeEEEe
Confidence 6788888887665443332 1 111 12 4566 33233333222 4677777664 3233333
Q ss_pred ccccceeEEEeecCCCeeEEec--CCCeEEEEEcCC
Q 022870 250 VHLEPVLCLSIDESCNGGISGG--ADQKIVLYNLDH 283 (291)
Q Consensus 250 ~h~~~v~~~~~~~~~~~l~s~s--~dg~i~vw~~~~ 283 (291)
. ..+. .|+|++.+|.-++ ..+.|..-+++.
T Consensus 224 ~--~~~~--~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 224 E--ANIE--HYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp C--SCEE--EEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred C--CCcc--eEEECCCEEEEEECCCCcEEEEEECCC
Confidence 2 2232 3566666665432 234555555554
No 370
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=41.18 E-value=1.2e+02 Score=23.11 Aligned_cols=51 Identities=14% Similarity=0.107 Sum_probs=28.5
Q ss_pred CCCcEEEEEccCCCCceeeccccccceeEEEeecCCCeeEEecC-CCeEEEEEcCCCc
Q 022870 229 EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA-DQKIVLYNLDHST 285 (291)
Q Consensus 229 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-dg~i~vw~~~~~~ 285 (291)
.+..|+..++. +.....+..+.. .+++++++.|+-.+. ...|.+-+++.+.
T Consensus 127 ~~~~Iy~~~~d--Gs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~ 178 (302)
T 3s25_A 127 TATSLYRIRID--GEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQS 178 (302)
T ss_dssp SCEEEEEEETT--SCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTE
T ss_pred CCceEEEEECC--CCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCC
Confidence 44566666665 333444444322 345666667664443 5677777776654
No 371
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=40.48 E-value=1.3e+02 Score=25.62 Aligned_cols=38 Identities=18% Similarity=-0.014 Sum_probs=26.2
Q ss_pred cEEEEEccCCCCceeecccc-ccceeEEEeecCCCeeEEe
Q 022870 232 SILVWDIRNPGIPLTAMKVH-LEPVLCLSIDESCNGGISG 270 (291)
Q Consensus 232 ~i~vwd~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~ 270 (291)
.|..++..+ ++....+.+. ...++.++|+||++.|...
T Consensus 510 ~v~~~dp~t-Gel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 510 QMLCADPAT-GEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTT-CCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCC-CeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 566777665 5554444432 3578999999999988654
No 372
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=38.46 E-value=89 Score=27.08 Aligned_cols=57 Identities=11% Similarity=0.100 Sum_probs=37.1
Q ss_pred eEEEeecCCCcEEEE-EccCCCCceeecc--ccccceeEEEeecCC--CeeEEecCCCeEEE
Q 022870 222 VNVLAGYEDGSILVW-DIRNPGIPLTAMK--VHLEPVLCLSIDESC--NGGISGGADQKIVL 278 (291)
Q Consensus 222 ~~l~~g~~dg~i~vw-d~~~~~~~~~~~~--~h~~~v~~~~~~~~~--~~l~s~s~dg~i~v 278 (291)
..+..|+.+|.|.=. ........+..+. ....+|..|.++++. .+|..++.++.++|
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 378889999987543 4333112222222 235688999999887 88888888776665
No 373
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=38.35 E-value=1.5e+02 Score=23.57 Aligned_cols=80 Identities=11% Similarity=0.085 Sum_probs=49.5
Q ss_pred cceeEEEEcCCCCEEE--EecC-------------CCeEEEEeCCCC--eEEEEEeeecC----CcceEEEEEeecC-C-
Q 022870 19 ASVTDVCFHQTKPILF--AGTT-------------GGELRIWDTVQH--RTVSSSWVHSA----AHGIVSVATGPSI-G- 75 (291)
Q Consensus 19 ~~v~~l~~~~~~~~l~--s~~~-------------dg~v~iwd~~~~--~~~~~~~~~~~----~~~v~~~~~~~~~-~- 75 (291)
-.|..+...+.+.+=+ +|-. --.|.+||+.+. +.++.+..... ...+..+++.... +
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 3577777777664322 2211 125889999999 99888765321 1347888887210 1
Q ss_pred ---CCeEEEEe-CCCeEEEEECCCCCC
Q 022870 76 ---LNKVISQG-RDGTVKCWDIENGGL 98 (291)
Q Consensus 76 ---~~~l~s~~-~dg~i~iwd~~~~~~ 98 (291)
+.+++.+. ..+-|.++|+.+++.
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~s 193 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDS 193 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcE
Confidence 23444333 467899999998864
No 374
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=36.69 E-value=1.5e+02 Score=25.32 Aligned_cols=38 Identities=18% Similarity=-0.014 Sum_probs=26.0
Q ss_pred cEEEEEccCCCCceeecccc-ccceeEEEeecCCCeeEEe
Q 022870 232 SILVWDIRNPGIPLTAMKVH-LEPVLCLSIDESCNGGISG 270 (291)
Q Consensus 232 ~i~vwd~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~ 270 (291)
.+.+.+..+ ++....+.++ ...++.++|+||++.|...
T Consensus 510 ~~~~~~~~~-g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 510 QMLCADPAT-GEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTT-CCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCC-CeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 455556555 5555555544 4689999999999888664
No 375
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=35.69 E-value=79 Score=26.55 Aligned_cols=58 Identities=12% Similarity=0.072 Sum_probs=38.9
Q ss_pred ceEEEeecCCCcEEEEEccCCCC---ceeecc--cccccee-EEEeecCCCeeEEecCCCeEEE
Q 022870 221 FVNVLAGYEDGSILVWDIRNPGI---PLTAMK--VHLEPVL-CLSIDESCNGGISGGADQKIVL 278 (291)
Q Consensus 221 ~~~l~~g~~dg~i~vwd~~~~~~---~~~~~~--~h~~~v~-~~~~~~~~~~l~s~s~dg~i~v 278 (291)
...+..|+.+|.|.-..+..... .+..+. ....+|. .|.++++..+|..++.++.++|
T Consensus 413 ~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 413 YSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 34788899999887665543121 222222 2246785 8999999999999987776655
No 376
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=35.66 E-value=1.4e+02 Score=25.44 Aligned_cols=58 Identities=7% Similarity=-0.049 Sum_probs=38.4
Q ss_pred eEEEeecCCCcEEEEEccCCCC---c--eeecc--ccccceeEEEeecCCCeeEEecCCCeEEEE
Q 022870 222 VNVLAGYEDGSILVWDIRNPGI---P--LTAMK--VHLEPVLCLSIDESCNGGISGGADQKIVLY 279 (291)
Q Consensus 222 ~~l~~g~~dg~i~vwd~~~~~~---~--~~~~~--~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw 279 (291)
..+..|+.+|.|.-.-+..... . +..+. ....+|..|.++++...|..++.++.++|-
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 3778899999876443322121 1 12222 245689999999998899999888776663
No 377
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=33.74 E-value=1.5e+02 Score=25.67 Aligned_cols=56 Identities=14% Similarity=0.165 Sum_probs=37.0
Q ss_pred EEEeecCCCcEE-EEEccCCC-C-----ceeecc--ccccceeEEEeecCCCeeEEecCCCeEEE
Q 022870 223 NVLAGYEDGSIL-VWDIRNPG-I-----PLTAMK--VHLEPVLCLSIDESCNGGISGGADQKIVL 278 (291)
Q Consensus 223 ~l~~g~~dg~i~-vwd~~~~~-~-----~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~dg~i~v 278 (291)
.+..|+.+|.|. +....... . .+.+++ ....+|..|.++++...|..++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 677899999875 33322211 1 122222 34568999999999999999998887665
No 378
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=32.40 E-value=54 Score=27.40 Aligned_cols=71 Identities=13% Similarity=0.111 Sum_probs=38.7
Q ss_pred CccceeEEEEcCCC--CEEEEecCCCeEEEEeCC-CCe---EEEEEeeecCCcceEEEEEeecCCCCeEEEEeCCCeEEE
Q 022870 17 HRASVTDVCFHQTK--PILFAGTTGGELRIWDTV-QHR---TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (291)
Q Consensus 17 h~~~v~~l~~~~~~--~~l~s~~~dg~v~iwd~~-~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~i 90 (291)
+...++.++..+.+ ..++.|..||.|.-.-+. .+. .+..+.......+|.. .+.. +++.|+.++.++.+++
T Consensus 403 ~~~~~T~iav~~~~~~tV~FlGT~~G~l~Kv~~~~~~~~~~~~~~~~~~~~~~pi~~-~l~~--~~~~Lyv~s~~~V~~v 479 (527)
T 4fww_A 403 GPVQVTALYVTRLDNVTVAHMGTMDGRILQVELVRSLNYLLYVSNFSLGDSGQPVQR-DVSR--LGDHLLFASGDQVFQV 479 (527)
T ss_dssp TTCCEEEEEEEEETTEEEEEEEETTSEEEEEECSCCSSCCCEEEEEEETTSCCCBCS-CCEE--ETTEEEEEETTEEEEE
T ss_pred CceEEEEEEEeccCCEEEEEEECCCCeEEEEEEcCCCCcceEEEEEEecCCCceeeh-hccc--CCCEEEEEECCEEEEE
Confidence 34457788777633 357789999987654432 221 2222332222234532 2333 3467888887765554
No 379
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=29.88 E-value=2.3e+02 Score=24.53 Aligned_cols=69 Identities=12% Similarity=0.158 Sum_probs=42.9
Q ss_pred ceeEEEEc----CCC---CEEEEecCCCeEEEE-eCCCCe-EEEEEeeecCCcceEEEEEeecCCC--CeEEEEeCCCeE
Q 022870 20 SVTDVCFH----QTK---PILFAGTTGGELRIW-DTVQHR-TVSSSWVHSAAHGIVSVATGPSIGL--NKVISQGRDGTV 88 (291)
Q Consensus 20 ~v~~l~~~----~~~---~~l~s~~~dg~v~iw-d~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~--~~l~s~~~dg~i 88 (291)
..+.|+.. .++ ..++.|..+|.|.-. ....+. .+..+..-....+|..|.+++ +. ..|+.++.++.+
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~--~~~~~~Lyv~s~~~V~ 475 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSS--KKGNRFVYAGSNSGVV 475 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECC--SSSSCEEEEECSSCEE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEecc--CCCccEEEEEEcCeEE
Confidence 35666653 233 367889999987433 443332 233333333335799999998 65 788888887766
Q ss_pred EE
Q 022870 89 KC 90 (291)
Q Consensus 89 ~i 90 (291)
++
T Consensus 476 ~v 477 (663)
T 1olz_A 476 QA 477 (663)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 380
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=24.20 E-value=2.1e+02 Score=23.98 Aligned_cols=59 Identities=14% Similarity=0.117 Sum_probs=39.2
Q ss_pred CceEEEeecCCCcEEEEEcc-CC-CCceeecc-ccccce-eEEEeecCCCeeEEecCCCeEEE
Q 022870 220 GFVNVLAGYEDGSILVWDIR-NP-GIPLTAMK-VHLEPV-LCLSIDESCNGGISGGADQKIVL 278 (291)
Q Consensus 220 g~~~l~~g~~dg~i~vwd~~-~~-~~~~~~~~-~h~~~v-~~~~~~~~~~~l~s~s~dg~i~v 278 (291)
|...+..|+.+|.|.-.-+. +. ...+..+. ....+| ..|.++++...|..++.++.++|
T Consensus 399 g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 399 GHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp TEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred CeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 44477889999988754443 21 12222322 234577 48999998889999988887776
No 381
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=22.93 E-value=2.7e+02 Score=23.59 Aligned_cols=59 Identities=20% Similarity=0.213 Sum_probs=37.8
Q ss_pred ceEEEeecCCCcEE-EEEccCC-----C-Cceeeccc-----------cccceeEEEeecCCCeeEEecCCCeEEEE
Q 022870 221 FVNVLAGYEDGSIL-VWDIRNP-----G-IPLTAMKV-----------HLEPVLCLSIDESCNGGISGGADQKIVLY 279 (291)
Q Consensus 221 ~~~l~~g~~dg~i~-vwd~~~~-----~-~~~~~~~~-----------h~~~v~~~~~~~~~~~l~s~s~dg~i~vw 279 (291)
...+..|+.+|.|. +...... . ..+.++.. ...+|..|.++++...|..++.++.++|-
T Consensus 420 ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~LYV~s~~~V~qVP 496 (565)
T 3oky_B 420 HTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGSLYVAFSTCVIKVP 496 (565)
T ss_dssp EEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTEEEEECSSCEEEEE
T ss_pred eEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCEEEEEecCeEEEee
Confidence 34788899999875 4332210 1 11222221 14578899999998899999888877763
No 382
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=22.70 E-value=83 Score=21.97 Aligned_cols=34 Identities=9% Similarity=0.142 Sum_probs=21.8
Q ss_pred ceeEEEeec-CCCeeEEecCCCeEEEEEcCCCcee
Q 022870 254 PVLCLSIDE-SCNGGISGGADQKIVLYNLDHSTVS 287 (291)
Q Consensus 254 ~v~~~~~~~-~~~~l~s~s~dg~i~vw~~~~~~~~ 287 (291)
-+.++.|.. ...-+++...+|++.++|.+-|++-
T Consensus 120 hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF~ 154 (188)
T 1ukf_A 120 HLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQ 154 (188)
T ss_dssp EEEEEEETTTEEEEEEEEEETTEEEEEETTTEEEE
T ss_pred eEEEEEecCCCceeEEeccCCCeEEEeCCCCceee
Confidence 344444522 2334555567899999999988764
No 383
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=20.22 E-value=2.9e+02 Score=24.06 Aligned_cols=58 Identities=10% Similarity=0.036 Sum_probs=38.0
Q ss_pred ceEEEeecCCCcEEEEEccCCCC---ceeecc--ccccce-eEEEeecCCCeeEEecCCCeEEE
Q 022870 221 FVNVLAGYEDGSILVWDIRNPGI---PLTAMK--VHLEPV-LCLSIDESCNGGISGGADQKIVL 278 (291)
Q Consensus 221 ~~~l~~g~~dg~i~vwd~~~~~~---~~~~~~--~h~~~v-~~~~~~~~~~~l~s~s~dg~i~v 278 (291)
...+..|+.+|.|.-.-+..... .+..+. ....+| ..|.++++...|..++.++.++|
T Consensus 412 ~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 412 YSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp EEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 34788899999887554432111 222322 234566 68999998888988888877666
Done!