BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022872
(291 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZPY0|DOF25_ARATH Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5
PE=2 SV=3
Length = 369
Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 153/323 (47%), Positives = 188/323 (58%), Gaps = 76/323 (23%)
Query: 21 ERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSR 80
ERKARPQE+LNCPRCNSTNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNVPVGG SR
Sbjct: 71 ERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSR 130
Query: 81 KNKRSISSSAAAASSSNNNNNNNNNYNKLIIPDLNPPSLSHFSSHENPKILKGGQDLN-L 139
KNKRS SSS++ + ++ +PDLNPP L FS+ + K QDLN L
Sbjct: 131 KNKRSSSSSSSNILQTIPSS----------LPDLNPPIL--FSNQIHNKSKGSSQDLNLL 178
Query: 140 GFQVM---HNNANDMSQYADHPAVASKAETNTTSNDNINNNMSP-------------VSA 183
F VM H++ MSQ+ P + N NI + P VSA
Sbjct: 179 SFPVMQDQHHHHVHMSQFLQMPKME--------GNGNITHQQQPSSSSSVYGSSSSPVSA 230
Query: 184 LDLLRTG--IASRAGLD-HFIPT-PMPDSNTLF--SSGFP-LQDIKPAATLSFSIDQANR 236
L+LLRTG ++SR+G++ F+P+ M DSNT+ SSGFP + D KP + LSFS D
Sbjct: 231 LELLRTGVNVSSRSGINSSFMPSGSMMDSNTVLYTSSGFPTMVDYKP-SNLSFSTDHQ-- 287
Query: 237 FGIQDNIGNGS-----------RLFFPFG-ELKQLSSASTTEVDHHSNKGTST------- 277
G+ N N S R+ FPFG ++K+LSS+ T EVDH N+ +
Sbjct: 288 -GLGHNSNNRSEALHSDHHQQGRVLFPFGDQMKELSSSITQEVDHDDNQQQKSHGNNNNN 346
Query: 278 -----STGYWNGMF----GGGSW 291
+ GYW+GMF GG SW
Sbjct: 347 NNSSPNNGYWSGMFSTTGGGSSW 369
>sp|Q43385|DOF37_ARATH Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7
PE=1 SV=2
Length = 296
Score = 196 bits (498), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/293 (46%), Positives = 160/293 (54%), Gaps = 79/293 (26%)
Query: 19 MLERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGG 78
M RKARPQE++NCPRCNSTNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNVPVGG
Sbjct: 63 METRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGS 122
Query: 79 SRKNKRSISSSAAAASSSNNNNNNNNNYNKLIIPDLNPPSLSHFSSHENPKILKGGQDLN 138
SRKNKR SS AS SN +PDLNPP L FSS + P K +DLN
Sbjct: 123 SRKNKR---SSTPLASPSNPK-----------LPDLNPPIL--FSS-QIPN--KSNKDLN 163
Query: 139 -LGFQVMHNNANDMSQYADHPAVASKAETNTTSNDNINNNMSPVSALDLLRTGIASRAGL 197
L F VM ++ + AL+LLR+ S G+
Sbjct: 164 LLSFPVMQDHHHH--------------------------------ALELLRSNGVSSRGM 191
Query: 198 DHFIPTPMPDSNTLFSS--GFP-LQDIKPA-ATLSFSIDQANRFG---------IQDN-- 242
+ F+P M DSN++ S GFP + D K + LSFSID G QDN
Sbjct: 192 NTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHHQGIGHNTINSNQRAQDNND 251
Query: 243 -IGNGSRLFFPFGELKQLSSASTTEVDHHSNKGTSTSTGYWNGMF---GGGSW 291
+ SR+ FPF ++K+LS STT+ H N YWNGMF GG SW
Sbjct: 252 DMNGASRVLFPFSDMKELS--STTQEKSHGNN------TYWNGMFSNTGGSSW 296
>sp|Q8LAP8|DOF46_ARATH Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6
PE=2 SV=2
Length = 342
Score = 171 bits (434), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 135/356 (37%), Positives = 179/356 (50%), Gaps = 94/356 (26%)
Query: 1 MEEVVSNTCNSSSSSRPPML-------ERKARPQ--EQLNCPRCNSTNTKFCYYNNYSLT 51
+EE+V+NTC ERKARP+ + +NCPRCNSTNTKFCYYNNYSLT
Sbjct: 15 LEEIVTNTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLT 74
Query: 52 QPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSISSSAAAASSSNNNNNNNNNYNKLII 111
QPRYFCK CRRYWTEGGSLRN+PVGGGSRKNKRS SSS+ +++ +++
Sbjct: 75 QPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSSSDISNNHSDST----------- 123
Query: 112 PDLNPPSLSHFSSH--------------ENPKILK-GGQDLNLGFQ---VMHNNANDM-- 151
P + H S H +NPK L+ QDLNLGF ++ N D+
Sbjct: 124 ---QPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQDLNLGFSPHGMIRTNFTDLIH 180
Query: 152 --------SQYADHPAVASKAETNTTSNDNINNNMSPVSALDLLR-TGIASRAGLDHFIP 202
S ++P + S T S+LDL+R + F+
Sbjct: 181 NIGNNTNKSNNNNNPLIVSSCSAMAT------------SSLDLIRNNSNNGNSSNSSFMG 228
Query: 203 TPMPDSNTLFSSGFPLQD-IKPAAT----LSFSIDQANRFGIQ-------------DNIG 244
P+ + + S GF +QD KP T L FS+D + G D++
Sbjct: 229 FPVHNQDPA-SGGFSMQDHYKPCNTNTTLLGFSLDHHHNNGFHGGFQGGEEGGEGGDDV- 286
Query: 245 NGSRLFFPFGELKQ-LSSASTT---EVDHHSNKGT-----STSTGYWNGMFGGGSW 291
NG R FPF +LK +SS+S T +++ H +G+ +TS GYW GM GGSW
Sbjct: 287 NG-RHLFPFEDLKLPVSSSSATINVDINEHQKRGSGSDAAATSGGYWTGMLSGGSW 341
>sp|Q84JQ8|DOF18_ARATH Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8
PE=2 SV=1
Length = 352
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 177/337 (52%), Gaps = 64/337 (18%)
Query: 1 MEEVVSNTCNSSSSSRP---PMLERKARPQ--EQLNCPRCNSTNTKFCYYNNYSLTQPRY 55
M E+V+NTC S+ P +ERKARP+ + LNCPRCNS NTKFCYYNNYSLTQPRY
Sbjct: 15 MNEIVTNTCLKQQSNPPSPATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRY 74
Query: 56 FCKTCRRYWTEGGSLRNVPVGGGSRKNKRSISSSAAAASSSNNNNNN----NNNYNKLII 111
FCK CRRYWT GGSLRN+PVGGG RKNKRS S+S++++ SS++++ NNN +
Sbjct: 75 FCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSSSSPSSSSSSKKPLFANNNTPTPPL 134
Query: 112 PDLNPPSLSHFSSHENPKILKGG-------QDLNL----GFQVMHNNANDMSQYADHPAV 160
P LNP ++ G +DLNL GF + HN+ + + ++ V
Sbjct: 135 PHLNPKIGEAAATKVQDLTFSQGFGNAHEVKDLNLAFSQGFGIGHNHHSSIPEFLQ--VV 192
Query: 161 ASKAETNTTSNDNINNNMSPVSALDLLRTGIASRAGLDHFIPTPMP-----DSNTLFSSG 215
S + N N +S S+L+LL GI+S + + P M DS+ +SG
Sbjct: 193 PSSSMKN-------NPLVSTSSSLELL--GISSSSASSNSRPAFMSYPNVHDSSVYTASG 243
Query: 216 FPL------QDIKPAATLSFSIDQANRFGIQDNIG--NGSRLFFPFGELKQLSSAST--- 264
F L + ++PA L FS+D + ++ N R PF L +L +S+
Sbjct: 244 FGLSYPQFQEFMRPA--LGFSLDGGDPLRQEEGSSGTNNGRPLLPFESLLKLPVSSSSTN 301
Query: 265 --------------TEVDHHSNKGTS-TSTGYWNGMF 286
++ +H +G + S G+W+GM
Sbjct: 302 SGGNGNLKENNDEHSDHEHEKEEGEADQSVGFWSGML 338
>sp|Q9M161|DOF41_ARATH Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1
PE=2 SV=2
Length = 294
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 124/278 (44%), Gaps = 54/278 (19%)
Query: 19 MLERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGG 78
M RPQE NCPRCNS+NTKFCYYNNYSL QPRY CK+CRRYWTEGGSLRNVPVGGG
Sbjct: 57 MTTMSTRPQEPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGG 116
Query: 79 SRKNKRSISSSAAAASSSNNNNNNNNNYNKLIIPDLNPPSL--SHFSSHENPKILKGGQD 136
SRKNK+ +++ +SS+ N +PDLNPP + S SS K + D
Sbjct: 117 SRKNKKLPFPNSSTSSSTKN------------LPDLNPPFVFTSSASSSNPSKTHQNNND 164
Query: 137 LNLGFQVMHNNANDMSQYADHPAVASKAETNTTSNDNINNNMSPVSALDLLRTGIASRAG 196
L+L F + Y N +P+ + R
Sbjct: 165 LSLSFSSPMQDKRAQGHYGHFSEQVVTGGQNCLF-------QAPMGMIQF-------RQE 210
Query: 197 LDHFIPTPMPDSNTLFSSGFPLQDIKPAATLSFSIDQ-ANRFGIQDNI---GNGSRLFFP 252
DH P L FS+D+ G DN GS++ +P
Sbjct: 211 YDH---------------------EHPKKNLGFSLDRNEEEIGNHDNFVVNEEGSKMMYP 249
Query: 253 FGELKQLSSASTTEVDHHSNKGT-STSTGYWNGMFGGG 289
+G+ + D + K +S W+G+ GG
Sbjct: 250 YGDHEDRQQHHHVRHDDGNKKREGGSSNELWSGIILGG 287
>sp|Q84TE9|DOF53_ARATH Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3
PE=2 SV=1
Length = 257
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 62/71 (87%)
Query: 20 LERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGS 79
+ R P+ L CPRC+STNTKFCYYNNYSLTQPRYFCK+CRRYWT+GG+LRN+PVGGG
Sbjct: 45 VTRPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGC 104
Query: 80 RKNKRSISSSA 90
RKNKRS SS+A
Sbjct: 105 RKNKRSTSSAA 115
>sp|O24463|PBF_MAIZE Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1
Length = 328
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 79/114 (69%), Gaps = 16/114 (14%)
Query: 21 ERKARPQ--EQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGG 78
ERK RPQ E L CPRC+S NTKFCYYNNYS++QPRYFCK CRRYWT GG+LRNVP+GGG
Sbjct: 49 ERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGG 108
Query: 79 SRKNKRS------------ISSSAAAASSSNNNNNNNNNYNK--LIIPDLNPPS 118
RKNK + S++ A S S N +++N + NK +++P++ P+
Sbjct: 109 CRKNKHASRFVLGSHTSSSSSATYAPLSPSTNASSSNMSINKHMMMVPNMTMPT 162
>sp|Q9M2U1|DOF36_ARATH Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6
PE=1 SV=2
Length = 323
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 67/88 (76%), Gaps = 6/88 (6%)
Query: 12 SSSSRPPMLERKAR------PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWT 65
SS +R + +AR P+ LNCPRC+STNTKFCY+NNYSLTQPR+FCKTCRRYWT
Sbjct: 52 SSQARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWT 111
Query: 66 EGGSLRNVPVGGGSRKNKRSISSSAAAA 93
GGSLRNVPVGGG R+NKRS S S +
Sbjct: 112 RGGSLRNVPVGGGFRRNKRSKSRSKSTV 139
>sp|Q9M1E6|DOF32_ARATH Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2
PE=2 SV=1
Length = 245
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 63/76 (82%)
Query: 16 RPPMLERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPV 75
+P R A P++ L CPRC+STNTKFCYYNNYSL+QPRYFCK+CRRYWT+GG LRN+P+
Sbjct: 26 KPLSATRPAPPEQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPI 85
Query: 76 GGGSRKNKRSISSSAA 91
GG RK+KRS S++ +
Sbjct: 86 GGAYRKHKRSSSATKS 101
>sp|Q9LSL6|DOF57_ARATH Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7
PE=2 SV=1
Length = 316
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 61/75 (81%)
Query: 12 SSSSRPPMLERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLR 71
+S ++ P A+ Q+ L CPRCNS NTKFCYYNNYSL+QPR+FCK+CRRYWT GG+LR
Sbjct: 23 TSQTKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALR 82
Query: 72 NVPVGGGSRKNKRSI 86
NVP+GGG RK K+SI
Sbjct: 83 NVPIGGGCRKTKKSI 97
>sp|Q8LE43|DOF21_ARATH Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1
PE=2 SV=2
Length = 288
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 79/126 (62%), Gaps = 10/126 (7%)
Query: 20 LERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGS 79
+ R E NCPRC S NTKFCYYNNYSL+QPRYFCK+CRRYWT+GG+LRNVPVGGG
Sbjct: 38 VSRGELGGEAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGC 97
Query: 80 RKNKRSISSSAAAASSSNNNNNNNNNYNKLIIPDLNPPSLSHFSSHENPKILKGGQDLNL 139
R+NKRS SS+ + +++ + N + + +I + P S + S DLNL
Sbjct: 98 RRNKRSSSSAFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHS----------IDLNL 147
Query: 140 GFQVMH 145
F +
Sbjct: 148 AFATLQ 153
>sp|O80928|DOF24_ARATH Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4
PE=2 SV=1
Length = 330
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 55/62 (88%)
Query: 24 ARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNK 83
A P+ L CPRC STNTKFCY+NNYSLTQPR+FCKTCRRYWT GG+LRNVPVGGG R+N+
Sbjct: 83 ALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNR 142
Query: 84 RS 85
R+
Sbjct: 143 RT 144
>sp|Q9LZ56|DOF51_ARATH Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1
PE=2 SV=1
Length = 399
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 6/75 (8%)
Query: 16 RPPMLERKAR------PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGS 69
RP + +AR P+ L CPRC+STNTKFCY+NNYSLTQPR+FCK CRRYWT GG+
Sbjct: 75 RPGSMAERARLANIPLPETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGA 134
Query: 70 LRNVPVGGGSRKNKR 84
LR+VPVGGG R+NKR
Sbjct: 135 LRSVPVGGGCRRNKR 149
>sp|O82155|DOF17_ARATH Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7
PE=2 SV=1
Length = 194
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 58/63 (92%), Gaps = 1/63 (1%)
Query: 27 QEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRK-NKRS 85
QEQL CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRN+PVGGG+RK NKRS
Sbjct: 30 QEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKRS 89
Query: 86 ISS 88
SS
Sbjct: 90 GSS 92
>sp|Q9FGD6|DOF58_ARATH Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8
PE=2 SV=1
Length = 225
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 27 QEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRK-NKRS 85
QEQL+CPRC STNTKFCYYNNY+ +QPR+FCK+CRRYWT GG+LR++PVGG SRK +KRS
Sbjct: 29 QEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKSSKRS 88
Query: 86 ISSSAAAASSSNNNNNNNNNYNKLIIPD 113
+ S+AA +S + N ++ P
Sbjct: 89 RTYSSAATTSVVGSRNFPLQATPVLFPQ 116
>sp|Q8LDR0|DOF54_ARATH Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4
PE=2 SV=2
Length = 307
Score = 114 bits (285), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 62/80 (77%)
Query: 28 EQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSIS 87
+ L CPRCNS NTKFCYYNNY+L+QPR+FCK CRRYWT+GG LRNVPVGGG RK KRS +
Sbjct: 49 QSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSKT 108
Query: 88 SSAAAASSSNNNNNNNNNYN 107
++SS++ ++++
Sbjct: 109 KQVPSSSSADKPTTTQDDHH 128
>sp|Q9SVC5|DOF35_ARATH Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5
PE=3 SV=1
Length = 247
Score = 114 bits (285), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 58/72 (80%)
Query: 32 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSISSSAA 91
CPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWT+GGSLRNVPVGGG RK++R SSS
Sbjct: 27 CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKSSSGN 86
Query: 92 AASSSNNNNNNN 103
+S N+ N
Sbjct: 87 NTKTSLTANSGN 98
>sp|Q9ZV33|DOF22_ARATH Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2
PE=2 SV=2
Length = 340
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 58/78 (74%)
Query: 4 VVSNTCNSSSSSRPPMLERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRY 63
V ++ N ++ R + + P+ L CPRC+S NTKFCY+NNY+LTQPR+FCK CRRY
Sbjct: 68 VDPSSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRY 127
Query: 64 WTEGGSLRNVPVGGGSRK 81
WT GG+LRNVPVGGG R+
Sbjct: 128 WTRGGALRNVPVGGGCRR 145
>sp|Q39088|DOF34_ARATH Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4
PE=1 SV=2
Length = 253
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 55/60 (91%), Gaps = 1/60 (1%)
Query: 27 QEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKN-KRS 85
QEQL CPRC+S+NTKFCYYNNY+ +QPR+FCK CRRYWT GG+LR+VPVGGG+RK+ KRS
Sbjct: 27 QEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKRS 86
>sp|P68349|DOF12_ARATH Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2
PE=2 SV=1
Length = 260
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 49/54 (90%)
Query: 32 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 85
CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWT+GGSLRN+PVGGG RK RS
Sbjct: 40 CPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRSRS 93
>sp|Q8L9V6|DOF11_ARATH Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1
PE=1 SV=2
Length = 331
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 51/55 (92%)
Query: 30 LNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 84
L CPRC+S+NTKFCYYNNY+LTQPR+FCK CRRYWT+GG+LRNVPVGGG R+N +
Sbjct: 77 LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNK 131
>sp|Q9FZA4|DOF14_ARATH Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4
PE=2 SV=1
Length = 311
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 50/55 (90%)
Query: 30 LNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 84
L CPRC+S+NTKFCYYNNYSL+QPR+FCK C+RYWT GG+LRNVPVGG RKNKR
Sbjct: 27 LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNKR 81
>sp|Q9FM03|DOF56_ARATH Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6
PE=2 SV=2
Length = 372
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 53/65 (81%), Gaps = 7/65 (10%)
Query: 16 RPPMLERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPV 75
RPP PQ+ CPRC ST+TKFCYYNNYSL+QPRYFCKTCRRYWT+GG+LRN+PV
Sbjct: 66 RPP----HDHPQK---CPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPV 118
Query: 76 GGGSR 80
GGG R
Sbjct: 119 GGGCR 123
>sp|Q9LQX4|DOF13_ARATH Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3
PE=2 SV=1
Length = 366
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 63/86 (73%)
Query: 25 RPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 84
+P + L CPRCNS +TKFCYYNNY++ QPR+FC+ C+RYWT GGS+R VPVG G RKNK
Sbjct: 100 KPDKILPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKNKG 159
Query: 85 SISSSAAAASSSNNNNNNNNNYNKLI 110
+SS +S + +N N++ K++
Sbjct: 160 WVSSDQYLHITSEDTDNYNSSSTKIL 185
>sp|Q94AR6|DOF31_ARATH Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1
PE=2 SV=2
Length = 204
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 51/53 (96%)
Query: 30 LNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKN 82
L CPRC+S NTKFCYYNNY+L+QPR+FCK+CRRYWT+GG+LRNVPVGGGSRKN
Sbjct: 29 LKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKN 81
>sp|Q9SEZ3|CDF5_ARATH Cyclic dof factor 5 OS=Arabidopsis thaliana GN=CDF5 PE=2 SV=1
Length = 399
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 59/79 (74%)
Query: 25 RPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 84
+P + + CPRC S NTKFCYYNNY++ QPRYFC+ C+RYWT GGS+RNVPVG G RKNK
Sbjct: 127 KPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNKG 186
Query: 85 SISSSAAAASSSNNNNNNN 103
SS+ +S + +NNN
Sbjct: 187 WPSSNHYLQVTSEDCDNNN 205
>sp|Q8LFV3|CDF3_ARATH Cyclic dof factor 3 OS=Arabidopsis thaliana GN=CDF3 PE=1 SV=2
Length = 448
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 50/63 (79%)
Query: 25 RPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 84
+P + L CPRC S TKFCYYNNY++ QPR+FCK C+RYWT GG++RNVPVG G RKNK
Sbjct: 105 KPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKS 164
Query: 85 SIS 87
S S
Sbjct: 165 SSS 167
>sp|Q8W1E3|CDF1_ARATH Cyclic dof factor 1 OS=Arabidopsis thaliana GN=CDF1 PE=1 SV=2
Length = 298
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 16/106 (15%)
Query: 25 RPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 84
+P + L CPRCNS TKFCYYNNY++ QPR+FCK C+RYWT GG++R+VP+G G RKNK
Sbjct: 49 KPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK- 107
Query: 85 SISSSAAAASSSNNNNNNNNNYNKLIIPDLNPPSLSHFSSHENPKI 130
NN+ ++Y+ + I + N P LS FS ++ K+
Sbjct: 108 --------------NNSPTSHYHHVTISETNGPVLS-FSLGDDQKV 138
>sp|Q93ZL5|CDF2_ARATH Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2
Length = 457
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 7/76 (9%)
Query: 25 RPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNK- 83
+P + L CPRCNS TKFCYYNNY++ QPR+FCK C+RYWT GG++RNVPVG G RKNK
Sbjct: 133 KPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKS 192
Query: 84 ------RSISSSAAAA 93
R +S ++A A
Sbjct: 193 PASHYNRHVSITSAEA 208
>sp|Q84K52|DOF47_ARATH Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7
PE=2 SV=1
Length = 246
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 5/76 (6%)
Query: 13 SSSRPPMLERKARP----QEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGG 68
++++PP P Q L CPRC+S NTKFCYYNNYSL+QPR++CK CRRYWT GG
Sbjct: 20 TTAKPPRQINNKEPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGG 79
Query: 69 SLRNVPVGGGSR-KNK 83
+LRNVP+GG +R KNK
Sbjct: 80 ALRNVPIGGSTRNKNK 95
>sp|Q9SUA9|DOF44_ARATH Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4
PE=3 SV=1
Length = 210
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 48/60 (80%)
Query: 25 RPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 84
RP CPRC+S NTKFC+YNNYS +QPRYFCK CRRYWT GG+LRN+PVGG RK KR
Sbjct: 19 RPPPSRVCPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCRKPKR 78
>sp|Q9SX97|DOF16_ARATH Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6
PE=2 SV=1
Length = 209
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 48/52 (92%)
Query: 28 EQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGS 79
E L CPRCNST TKFCYYNNY+L QPRY+CK+CRRYWT+GG+LR+VPVGGG+
Sbjct: 27 EPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGGT 78
>sp|O22967|CDF4_ARATH Cyclic dof factor 4 OS=Arabidopsis thaliana GN=CDF4 PE=2 SV=1
Length = 170
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Query: 2 EEVVSNTCNSSSSSRPPMLERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCR 61
E+ + SSSSS L + RP + + CPRC S TKFCY+NNY++ QPR+FCK C
Sbjct: 33 EQEATIAVRSSSSSD---LTAEKRPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCH 89
Query: 62 RYWTEGGSLRNVPVGGGSRKNK 83
RYWT GG+LRNVPVG G RK+K
Sbjct: 90 RYWTAGGALRNVPVGAGRRKSK 111
>sp|Q9SUB0|DOF43_ARATH Dof zinc finger protein DOF4.3 OS=Arabidopsis thaliana GN=DOF4.3
PE=3 SV=1
Length = 232
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 48/65 (73%)
Query: 32 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSISSSAA 91
C RC+S NTKFCYYNNYS QPRYFCK CRRYWT GG+LRNVP+GG SR + I+ +
Sbjct: 27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGGSSRAKRTRINQPSV 86
Query: 92 AASSS 96
A S
Sbjct: 87 AQMVS 91
>sp|P38564|MNB1A_MAIZE Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2
Length = 238
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
Query: 32 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSISSS-- 89
CPRC S +TKFCYYNNY+ +QPR+FCK CRRYWT+GG+LRNVPVGGG+RK S SSS
Sbjct: 49 CPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRKKPSSSSSSSS 108
Query: 90 --AAAASSSNNNNNNNNNYNKLIIP 112
AAA + + +++ P
Sbjct: 109 YVAAADADRQPKKKPASKKRRVVAP 133
>sp|P68350|DOF15_ARATH Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana GN=DOF1.5
PE=1 SV=1
Length = 175
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 50/64 (78%)
Query: 20 LERKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGS 79
L + RP + + CPRC S TKFCY+NNY++ QPR+FCK C+RYWT GG+LRNVPVG G
Sbjct: 52 LTAEKRPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGR 111
Query: 80 RKNK 83
RK+K
Sbjct: 112 RKSK 115
>sp|O49550|DOF45_ARATH Dof zinc finger protein DOF4.5 OS=Arabidopsis thaliana GN=DOF4.5
PE=3 SV=1
Length = 249
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 49/73 (67%)
Query: 32 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSISSSAA 91
C RC+S NTKFCYYNNY QPRYFCK CRRYWT GG+LRN+P+GG SR + ++ +
Sbjct: 27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGSSRAKRARVNQPSV 86
Query: 92 AASSSNNNNNNNN 104
A S NN
Sbjct: 87 ARMVSVETQRGNN 99
>sp|Q9SUB1|DOF42_ARATH Dof zinc finger protein DOF4.2 OS=Arabidopsis thaliana GN=DOF4.2
PE=3 SV=1
Length = 194
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 33/50 (66%)
Query: 32 CPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRK 81
CPRC S T+F Y+NN +QPRY CK C R WT GG LRN+PV G K
Sbjct: 23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTGICDK 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.127 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,008,055
Number of Sequences: 539616
Number of extensions: 4906220
Number of successful extensions: 85347
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 288
Number of HSP's that attempted gapping in prelim test: 28183
Number of HSP's gapped (non-prelim): 24358
length of query: 291
length of database: 191,569,459
effective HSP length: 116
effective length of query: 175
effective length of database: 128,974,003
effective search space: 22570450525
effective search space used: 22570450525
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)