Query 022874
Match_columns 291
No_of_seqs 107 out of 116
Neff 3.6
Searched_HMMs 13730
Date Mon Mar 25 12:35:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022874.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022874hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2vcha1 c.87.1.10 (A:6-476) Hy 58.1 2.9 0.00021 34.5 3.0 14 90-103 455-468 (471)
2 d1eo0a_ a.48.3.1 (A:) Transcri 53.1 9.2 0.00067 27.3 4.7 26 74-99 46-74 (77)
3 d1n81a_ a.185.1.1 (A:) Gametoc 38.3 17 0.0012 29.9 4.6 27 60-86 67-93 (186)
4 d1dd3a1 a.108.1.1 (A:1-57) Rib 35.3 19 0.0014 24.7 3.7 26 30-55 6-31 (57)
5 d1uptb_ a.193.1.1 (B:) Golgi a 30.4 14 0.001 25.5 2.3 23 13-35 28-50 (58)
6 d2acva1 c.87.1.10 (A:3-463) Tr 29.0 27 0.0019 28.2 4.4 31 19-54 408-439 (461)
7 d2qj2a1 g.10.1.1 (A:36-126) He 28.9 21 0.0015 25.8 3.3 41 200-257 27-67 (91)
8 d1iira_ c.87.1.5 (A:) UDP-gluc 23.6 21 0.0016 28.0 2.7 7 4-10 325-331 (401)
9 d3bnea2 b.12.1.1 (A:7-149) Pla 21.7 9.2 0.00067 30.4 0.0 27 135-162 23-49 (143)
10 d1j1ua_ c.26.1.1 (A:) Tyrosyl- 20.2 30 0.0022 29.0 3.1 35 46-83 270-304 (306)
No 1
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=58.14 E-value=2.9 Score=34.50 Aligned_cols=14 Identities=21% Similarity=0.342 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHH
Q 022874 90 QREAVESWRREKLE 103 (291)
Q Consensus 90 qr~AlE~WRkeKLe 103 (291)
.+.-||+||..|-+
T Consensus 455 ~~~~~~~~~~~~~~ 468 (471)
T d2vcha1 455 LSLVALKWKAHKKE 468 (471)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHh
Confidence 44479999998876
No 2
>d1eo0a_ a.48.3.1 (A:) Transcription elongation factor TFIIS N-domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=53.09 E-value=9.2 Score=27.29 Aligned_cols=26 Identities=12% Similarity=0.261 Sum_probs=13.9
Q ss_pred HHHHhhhcccCCC---hHHHHHHHHHHHH
Q 022874 74 ILRRLQSSDVKGN---VSAQREAVESWRR 99 (291)
Q Consensus 74 i~qRL~dl~~~sn---~~~qr~AlE~WRk 99 (291)
|-+..+.|+..+| ...-++-|+.|++
T Consensus 46 iG~~Vn~LRkh~~~~v~~lAk~Lv~~WK~ 74 (77)
T d1eo0a_ 46 VGVEVNKFKKSTNVEISKLVKKMISSWKD 74 (77)
T ss_dssp HHHHHHHCCSSSCTTHHHHHHHHHHHHHH
T ss_pred ccHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 3344555555444 3334445888875
No 3
>d1n81a_ a.185.1.1 (A:) Gametocyte protein Pfg27 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=38.27 E-value=17 Score=29.88 Aligned_cols=27 Identities=22% Similarity=0.267 Sum_probs=24.9
Q ss_pred ccccHHHHhHHHHHHHHHhhhcccCCC
Q 022874 60 FELPRAVKLRMIDEILRRLQSSDVKGN 86 (291)
Q Consensus 60 ~~lp~~~kqk~a~ei~qRL~dl~~~sn 86 (291)
..||.++|-.+|.-|+.||+|+...-.
T Consensus 67 ~~lp~ei~dsmalRISdRLr~ycfdk~ 93 (186)
T d1n81a_ 67 FLIEERVQDNIVNRISDRLISYCTDKE 93 (186)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHSSSC
T ss_pred hcCcHHHHHHHHHHHHHHHHHHHccch
Confidence 789999999999999999999988665
No 4
>d1dd3a1 a.108.1.1 (A:1-57) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}
Probab=35.32 E-value=19 Score=24.68 Aligned_cols=26 Identities=19% Similarity=0.233 Sum_probs=20.9
Q ss_pred HHHHHhhcCcHHHHHHHHHHHHhhhc
Q 022874 30 SVRIRSDNEPMALVKLVNGLKQEFSR 55 (291)
Q Consensus 30 S~riRra~ePveLI~rVKei~~E~~~ 55 (291)
=++.=..|-=.||.++||.||.+|-.
T Consensus 6 iie~I~~~tv~El~ELvKalEekfGV 31 (57)
T d1dd3a1 6 IIEAIEKLTVSELAELVKKLEDKFGV 31 (57)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHhccHHHHHHHHHHHHHHhCc
Confidence 34445678889999999999999974
No 5
>d1uptb_ a.193.1.1 (B:) Golgi autoantigen, golgin-245 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.41 E-value=14 Score=25.51 Aligned_cols=23 Identities=30% Similarity=0.429 Sum_probs=19.6
Q ss_pred hccccccCHHHHHHHHHHHHHHh
Q 022874 13 LCTVVKYTPDQIRNMEESVRIRS 35 (291)
Q Consensus 13 ~~~~v~yt~~Qir~~eES~riRr 35 (291)
++.+++|+++|..+|=|.++.|.
T Consensus 28 i~av~kF~~~Q~q~iL~kE~~r~ 50 (58)
T d1uptb_ 28 ITTVLKFPDDQTQKILEREDARL 50 (58)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHhcch
Confidence 45688999999999998888773
No 6
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}
Probab=28.99 E-value=27 Score=28.24 Aligned_cols=31 Identities=13% Similarity=0.135 Sum_probs=18.4
Q ss_pred cCHHHHHHHHHHHHHHhhcC-cHHHHHHHHHHHHhhh
Q 022874 19 YTPDQIRNMEESVRIRSDNE-PMALVKLVNGLKQEFS 54 (291)
Q Consensus 19 yt~~Qir~~eES~riRra~e-PveLI~rVKei~~E~~ 54 (291)
.|+++|++- ||+.++ +-..-+++++|++.+.
T Consensus 408 ~t~~~l~~a-----~~~vl~~d~~~r~~a~~l~~~~r 439 (461)
T d2acva1 408 VAAEEIEKG-----LKDLMDKDSIVHKKVQEMKEMSR 439 (461)
T ss_dssp CCHHHHHHH-----HHHHTCTTCTHHHHHHHHHHHHH
T ss_pred cCHHHHHHH-----HHHHhhCCHHHHHHHHHHHHHHH
Confidence 466666542 666663 4556667777776554
No 7
>d2qj2a1 g.10.1.1 (A:36-126) Hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.91 E-value=21 Score=25.78 Aligned_cols=41 Identities=17% Similarity=0.422 Sum_probs=29.2
Q ss_pred cccCCHHHHHHHHHHhhhhcCCCCCCCceeEECCCCCCCCCCCccCCCCCcccccccC
Q 022874 200 HHRDSAADCCQACIEQAKRAKPGQMKCNIWVYCPAETGCHSPDKYEHKYQECWLKYAE 257 (291)
Q Consensus 200 ~~~~SA~eCC~AC~~~~~~~~~g~~~CNvWVfC~d~~GC~spd~y~~~~geCWLK~~~ 257 (291)
..+.|+++|-+.|.+- +.....|-++.|=. ..+.|+|-...
T Consensus 27 ~~~~s~eeCA~rC~~~----~~~~f~CrSF~y~~-------------~~~~C~Ls~~n 67 (91)
T d2qj2a1 27 KKVNTADQCANRCTRN----KGLPFTCKAFVFDK-------------ARKQCLWFPFN 67 (91)
T ss_dssp EECSCHHHHHHHHHTT----TTCSSCCCEEEEET-------------TTTEEEEESSC
T ss_pred cccCCHHHHHHHHHcc----CCCCceEEeEEEEC-------------CCCeEEEcccc
Confidence 3457999999999972 22345688887743 56899998653
No 8
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}
Probab=23.60 E-value=21 Score=28.03 Aligned_cols=7 Identities=29% Similarity=0.676 Sum_probs=3.8
Q ss_pred ehhhhHH
Q 022874 4 VILPFFF 10 (291)
Q Consensus 4 ~~~~~~~ 10 (291)
|++|+++
T Consensus 325 v~~P~~~ 331 (401)
T d1iira_ 325 ILLPQMA 331 (401)
T ss_dssp EECCCST
T ss_pred EEccccc
Confidence 4556554
No 9
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]}
Probab=21.67 E-value=9.2 Score=30.37 Aligned_cols=27 Identities=19% Similarity=0.281 Sum_probs=17.8
Q ss_pred hHHHHHhhccccCceeeccccCCCCCCC
Q 022874 135 WAALSEEIGLWIPTEIIHKEHGDKPKGV 162 (291)
Q Consensus 135 w~~~~e~ig~w~p~~~~~~~~~~k~~~~ 162 (291)
.|.+.|=||--+--+++..+++|+ .+.
T Consensus 23 lD~~~el~Gk~V~lqLVS~~~~d~-~g~ 49 (143)
T d3bnea2 23 VDNLNAFLGRSVSLQLISATKADA-HGK 49 (143)
T ss_dssp --CGGGGSTTSEEEEEEEEEEECT-TSC
T ss_pred hhhhhHhhCCcEEEEEEEeeccCC-CCC
Confidence 456666688777778888777773 444
No 10
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=20.21 E-value=30 Score=28.95 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=26.9
Q ss_pred HHHHHHhhhcccccccccHHHHhHHHHHHHHHhhhccc
Q 022874 46 VNGLKQEFSRDESVFELPRAVKLRMIDEILRRLQSSDV 83 (291)
Q Consensus 46 VKei~~E~~~e~~~~~lp~~~kqk~a~ei~qRL~dl~~ 83 (291)
+++|++++... .-.|.++|+.+|++|.+-|..++.
T Consensus 270 ~~el~~~~~~g---~l~~~~~K~~lae~i~~~l~pire 304 (306)
T d1j1ua_ 270 YEELESLFKNK---ELHPMDLKNAVAEELIKILEPIRK 304 (306)
T ss_dssp HHHHHHHHHTT---SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 46777777653 235789999999999999987753
Done!