Query 022875
Match_columns 291
No_of_seqs 231 out of 1100
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 12:36:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022875.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022875hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1e9g_A Ppase, inorganic pyroph 100.0 1.1E-83 3.8E-88 600.4 19.9 235 55-291 1-243 (286)
2 3q46_A TT-ippase; inorganic py 100.0 3.1E-66 1.1E-70 455.3 14.4 174 81-280 1-175 (178)
3 2prd_A Pyrophosphate phosphohy 100.0 3.8E-63 1.3E-67 434.3 17.5 170 82-277 1-174 (174)
4 3fq3_A Inorganic pyrophosphata 100.0 4E-63 1.4E-67 441.0 17.4 176 76-277 16-196 (197)
5 3gvf_A Inorganic pyrophosphata 100.0 4.1E-63 1.4E-67 440.7 16.7 176 76-277 16-196 (196)
6 2au7_A Inorganic pyrophosphata 100.0 2.9E-62 9.8E-67 429.1 17.8 169 83-277 1-174 (175)
7 3ld3_A Inorganic pyrophosphata 100.0 6E-62 2.1E-66 434.0 17.8 176 76-277 16-196 (199)
8 2bqx_A Inorganic pyrophosphata 100.0 1.8E-61 6.2E-66 423.4 16.1 169 83-277 2-173 (173)
9 3tr4_A Inorganic pyrophosphata 100.0 4.1E-61 1.4E-65 422.7 16.8 167 85-277 6-176 (178)
10 3d53_A Inorganic pyrophosphata 100.0 6.8E-61 2.3E-65 419.7 16.8 166 83-274 3-172 (173)
11 1qez_A Ppase, S-ppase, protein 100.0 1.4E-59 4.7E-64 411.5 17.7 166 81-277 3-171 (173)
12 1sxv_A Inorganic pyrophosphata 100.0 5.5E-58 1.9E-62 400.8 14.9 158 94-277 11-169 (172)
13 1x5s_A Cold-inducible RNA-bind 27.2 61 0.0021 23.4 3.8 43 230-273 25-76 (102)
14 4gio_A Putative lipoprotein; u 26.3 32 0.0011 27.1 2.2 48 65-112 50-103 (107)
15 2ek1_A RNA-binding protein 12; 22.7 88 0.003 22.1 3.8 42 230-272 28-78 (95)
16 3bs9_A Nucleolysin TIA-1 isofo 22.2 1.1E+02 0.0038 21.1 4.2 42 230-273 19-70 (87)
17 2dgt_A RNA-binding protein 30; 22.0 50 0.0017 23.5 2.4 43 230-273 23-66 (92)
18 2cpz_A CUG triplet repeat RNA- 21.6 1.2E+02 0.004 22.5 4.5 42 230-273 38-89 (115)
19 2cqh_A IGF-II mRNA-binding pro 21.2 1.6E+02 0.0054 20.7 5.0 43 230-273 21-66 (93)
20 2cqb_A Peptidyl-prolyl CIS-tra 20.6 1E+02 0.0035 22.1 3.9 41 230-272 25-75 (102)
No 1
>1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A
Probab=100.00 E-value=1.1e-83 Score=600.44 Aligned_cols=235 Identities=48% Similarity=0.892 Sum_probs=225.1
Q ss_pred ceeEEEecCCCCcceEEEEEcCCCCccCCCCCCCCCCC--CCeeEEEEEeCCCCCceEEEeccCCCCceeeeccCCeeeE
Q 022875 55 QVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLG--DGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY 132 (291)
Q Consensus 55 ~~~~~~~G~~~t~~~r~~~~~~~g~~~SpwHDIPl~~~--~~~~n~VVEIPrgS~aKyEi~k~~~~npI~qD~k~g~lr~ 132 (291)
+|+++++|+++|++||+||++ +|+++|||||||++.+ ++.|||||||||||++|||+++++++|||+||.++|++|+
T Consensus 1 ~y~~~~~G~~~t~~~r~~~~~-~g~~~sp~hdIp~~~~~~~~~~nvVIEIP~gs~~KyEidk~~~~nPIkqd~k~G~lr~ 79 (286)
T 1e9g_A 1 TYTTRQIGAKNTLEYKVYIEK-DGKPVSAFHDIPLYADKENNIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRF 79 (286)
T ss_dssp CEEEEEEEETTSTTCEEEEEE-TTEEECTTTTSCSEEETTTTEEEEEEEECTTCCBCEEECTTSTTCCEEECEETTEECB
T ss_pred CceeeeecCCCCcceEEEEEe-CCeecCchhhCCCCCCCCCCEEEEEEEECCCCCeEEEEccCCCCCcchhhhcCCcEEE
Confidence 489999999999999999987 6999999999999865 3799999999999999999999999999999999999987
Q ss_pred ----ecc-ccccccCccccccCCCCcCCcccCCCCCCCCcceEEEecCcccCCceEEEEEEceeEEeeeCCccceEEEEE
Q 022875 133 ----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAI 207 (291)
Q Consensus 133 ----yP~-~~~~NYGfIPqTwedp~~~~~~~~g~~gDgDPLDVlvig~~~~~~G~v~~vrvlGvL~miDeGE~DwKIIaV 207 (291)
||+ .|||||||||||||||++.+++ ||+.||||||||||||++++.+|+|++|||||+|+|+|+||+|||||||
T Consensus 80 dr~l~~~~~YP~NYGfIPqTledp~~~~~~-t~~~gDgDPLDVlvi~~~p~~pG~vi~vr~IGvl~MiDege~D~KIIaV 158 (286)
T 1e9g_A 80 VRNCFPHHGYIHNYGAFPQTWEDPNVSHPE-TKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAI 158 (286)
T ss_dssp CCEETTCCSCSSEEEECSSCCCCTTSEETT-TTEEBCSSCCEEEECCSSCCCTTCEEEEEEEEEECEEETTEECCEEEEE
T ss_pred EeccCCCCCCccCcccCcccccCccccccc-CCCCCCCCceEEEEecCccCCCccEEEEEEeEEEEeccCCCCCceEEEE
Confidence 564 5899999999999999999997 8999999999999999999999999999999999999999999999999
Q ss_pred eCCCccccCCCCcccccccChhHHHHHHHHHHhccCCCCCcceEeecCCCCCCHHHHHHHHHHHHHHHHHHhcCcc-CCC
Q 022875 208 SLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVKRSI-EAG 286 (291)
Q Consensus 208 ~~~Dp~~~~indi~Dv~~~~Pg~l~~i~~wFr~YK~~eGK~~n~~g~~~~~~~~~~A~~vI~e~~~~~~~l~~~~~-~~~ 286 (291)
+++||+|++|||++||++++|++|++|+|||++||.++||++|.|++.+.+.++++|+++|++||++|++|+.|+. ++|
T Consensus 159 ~~~Dp~~~~i~di~Dl~~~~p~~l~~i~~fF~~YK~leGK~~n~~~~~~~~~~~~~A~~vI~~~~~~~~~l~~~~~~~~~ 238 (286)
T 1e9g_A 159 DINDPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALDIIKETHDSWKQLIAGKSSDSK 238 (286)
T ss_dssp ETTSTTGGGCCSHHHHHHHSTTHHHHHHHHHHHTTGGGTCCCCEEGGGGCCBCHHHHHHHHHHHHHHHHHHHTTCCSCCT
T ss_pred eCCCcccccCCCHHHhchhhHHHHHHHHHHHHHhcCcCCCCcceeEecCcCCCHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999999999999999999999999999999999999999999999988899999999999999999999999998 889
Q ss_pred CcccC
Q 022875 287 ELSLV 291 (291)
Q Consensus 287 ~~~~~ 291 (291)
+|+|.
T Consensus 239 ~~~~~ 243 (286)
T 1e9g_A 239 GIDLT 243 (286)
T ss_dssp TCCCC
T ss_pred cccee
Confidence 99873
No 2
>3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} SCOP: b.40.5.1 PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A
Probab=100.00 E-value=3.1e-66 Score=455.27 Aligned_cols=174 Identities=30% Similarity=0.496 Sum_probs=159.8
Q ss_pred cCCCCCCCCCC-CCCeeEEEEEeCCCCCceEEEeccCCCCceeeeccCCeeeEeccccccccCccccccCCCCcCCcccC
Q 022875 81 VSPWHDIPLQL-GDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVE 159 (291)
Q Consensus 81 ~SpwHDIPl~~-~~~~~n~VVEIPrgS~aKyEi~k~~~~npI~qD~k~g~lr~yP~~~~~NYGfIPqTwedp~~~~~~~~ 159 (291)
+|||||||++. .++.|||||||||||++|||+++++ ++|++|+.....++|| ||||||||||+
T Consensus 1 ~spwhdi~~g~~~p~~~nvvIEIP~gs~~KyE~dk~~--g~i~~DR~l~~~~~YP----~NYGfIP~Tl~---------- 64 (178)
T 3q46_A 1 MNPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKAT--GLLKLDRVLYSPFFYP----VDYGIIPQTWY---------- 64 (178)
T ss_dssp CCTTTTSCSCSBTTTBCCCEEEECTTCCEEEEECTTT--SCEEEEEECSSSCCCS----SEEEECTTCCB----------
T ss_pred CCccccCCCCCCCCCEEEEEEEECCCCCeeEEECCCC--CCEEEeecccCCCCCC----cccccCCCccC----------
Confidence 69999999975 4799999999999999999999876 5799997655444455 59999999998
Q ss_pred CCCCCCCcceEEEecCcccCCceEEEEEEceeEEeeeCCccceEEEEEeCCCccccCCCCcccccccChhHHHHHHHHHH
Q 022875 160 GAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFR 239 (291)
Q Consensus 160 g~~gDgDPLDVlvig~~~~~~G~v~~vrvlGvL~miDeGE~DwKIIaV~~~Dp~~~~indi~Dv~~~~Pg~l~~i~~wFr 239 (291)
+|||||||||||++++.||++++|||||+|+|+|+||+|||||||+++||+|++|||++||+++ ++++|+|||+
T Consensus 65 ---~DgDPlDvlvl~~~~~~pG~vi~~r~iGvl~m~Dege~D~KiiaV~~~Dp~~~~i~di~Dl~~~---~l~~i~~fF~ 138 (178)
T 3q46_A 65 ---DDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKDISDVPKA---FLDEIAHFFQ 138 (178)
T ss_dssp ---TTTBCCEEEECCSSCCCTTCBC-CEEEEEEEEEETTEECCEEEEECTTCGGGTTCCSGGGSCHH---HHHHHHHHHH
T ss_pred ---CCCCeeEEEEEcCCCCCCceEEEEEEEEEEEeecCCCccceEEEeeCCCccccccCChHHCCHH---HHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999855 8999999999
Q ss_pred hccCCCCCcceEeecCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 022875 240 DYKIPDGKPANKFGLGNKAADKDYALKVITETNESWAKLVK 280 (291)
Q Consensus 240 ~YK~~eGK~~n~~g~~~~~~~~~~A~~vI~e~~~~~~~l~~ 280 (291)
+||.++||+++++||.+ +++|+++|++||++|++++.
T Consensus 139 ~YK~legK~v~~~g~~~----~~~A~~~I~~~~~~~~~~~~ 175 (178)
T 3q46_A 139 RYKELQGKTTKIEGWGN----AEEAKREILRAIEMYKEKFG 175 (178)
T ss_dssp HTTGGGTCCEEEEEEEE----HHHHHHHHHHHHHHHHHC-C
T ss_pred HhcCcCCCceEeccccC----HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999984 99999999999999999875
No 3
>2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1
Probab=100.00 E-value=3.8e-63 Score=434.29 Aligned_cols=170 Identities=26% Similarity=0.409 Sum_probs=159.3
Q ss_pred CCCCCCCCCCC-CCeeEEEEEeCCCCCceEEEeccCCCCceeeeccCCeeeEeccccccccCccccccCCCCcCCcccCC
Q 022875 82 SPWHDIPLQLG-DGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEG 160 (291)
Q Consensus 82 SpwHDIPl~~~-~~~~n~VVEIPrgS~aKyEi~k~~~~npI~qD~k~g~lr~yP~~~~~NYGfIPqTwedp~~~~~~~~g 160 (291)
|+|||||++.+ ++.||||||||+||++|||+++++ ++|++|+..+..++||+ |||||||||+
T Consensus 1 ~~~h~ip~~~~~p~~~nvvIEIP~gs~~KyE~dk~~--g~i~~DR~l~~~~~YP~----NYGfIP~Tl~----------- 63 (174)
T 2prd_A 1 ANLKSLPVGDKAPEVVHMVIEVPRGSGNKYEYDPDL--GAIKLDRVLPGAQFYPG----DYGFIPSTLA----------- 63 (174)
T ss_dssp CCGGGSCCCTTTTTEEEEEEEECTTCCEEEEEETTT--TEEEEEEECSSSCCCSS----EEEECSSCCC-----------
T ss_pred CCcccCCCCCCCCCEEEEEEEecCCCCeEEEEecCC--CCEEEeeecCCCCcCCc----ccccccCccc-----------
Confidence 79999999876 589999999999999999999876 58999987666556665 9999999998
Q ss_pred CCCCCCcceEEEecCcccCCceEEEEEEceeEEeeeCCccceEEEEEeCCCccccCCCCcccccccChhHHHHHHHHHHh
Q 022875 161 AFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRD 240 (291)
Q Consensus 161 ~~gDgDPLDVlvig~~~~~~G~v~~vrvlGvL~miDeGE~DwKIIaV~~~Dp~~~~indi~Dv~~~~Pg~l~~i~~wFr~ 240 (291)
||||||||||||++++.||++++|||||+|+|+|+||+|||||||+++||+|++|+|++||+++ ++++|+|||++
T Consensus 64 --~DgDPlDvlvl~~~p~~pG~vi~~r~iGvl~m~Dege~D~KiiaV~~~dp~~~~i~di~Dl~~~---~l~~i~~fF~~ 138 (174)
T 2prd_A 64 --EDGDPLDGLVLSTYPLLPGVVVEVRVVGLLLMEDEKGGDAKVIGVVAEDQRLDHIQDIGDVPEG---VKQEIQHFFET 138 (174)
T ss_dssp --TTSSCCEEEEECSSCCCTTCEEEEEEEEEEEEEESSCEEEEEEEEETTCGGGTTCCSGGGSCHH---HHHHHHHHHHH
T ss_pred --CCCCceEEEEECCCCCCCceEEEEEEEEEEEEecCCCCccEEEEEECCCcchhhcCChHHCCHH---HHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999866 79999999999
Q ss_pred ccCCC---CCcceEeecCCCCCCHHHHHHHHHHHHHHHHH
Q 022875 241 YKIPD---GKPANKFGLGNKAADKDYALKVITETNESWAK 277 (291)
Q Consensus 241 YK~~e---GK~~n~~g~~~~~~~~~~A~~vI~e~~~~~~~ 277 (291)
||.++ ||++++.||. ++++|+++|++||++|++
T Consensus 139 YK~le~k~gK~v~~~gw~----~~~~A~~~I~~~~~~~~~ 174 (174)
T 2prd_A 139 YKALEAKKGKWVKVTGWR----DRKAALEEVRACIARYKG 174 (174)
T ss_dssp TTGGGGGGTCCEEEEEEE----CHHHHHHHHHHHHHHHHC
T ss_pred hcCccccCCCceEECccc----CHHHHHHHHHHHHHHHhC
Confidence 99999 9999999998 599999999999999974
No 4
>3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A
Probab=100.00 E-value=4e-63 Score=441.01 Aligned_cols=176 Identities=28% Similarity=0.379 Sum_probs=157.2
Q ss_pred CCCCccCCCCCCCCCCC-CCeeEEEEEeCCC-CCceEEEeccCCCCceeeeccCCeeeEeccccccccCccccccCCCCc
Q 022875 76 NSGKKVSPWHDIPLQLG-DGVFNFVVEIPKE-SSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSF 153 (291)
Q Consensus 76 ~~g~~~SpwHDIPl~~~-~~~~n~VVEIPrg-S~aKyEi~k~~~~npI~qD~k~g~lr~yP~~~~~NYGfIPqTwedp~~ 153 (291)
..|+++|+||+||++.+ ++.||||||||+| |++|||+++++ ++|+||+.....++||+ |||||||||+
T Consensus 16 ~~g~~im~~~~ip~g~~~p~~vnvvIEIP~g~s~~KyE~dk~~--g~i~~DR~l~~~~~YP~----NYGfIP~Tl~---- 85 (197)
T 3fq3_A 16 TQGPGSMNIDAISIGSNPPEDVNVIIEVPVGGQPIKYEMDKKA--GALIVDRFLYTPMTYPG----NYGFVPHTLS---- 85 (197)
T ss_dssp ------CCGGGSCSCSSTTSCEEEEEEECTTCCSEEEEEETTT--TEEEEEEECCSSBCCSS----EEEECTTCCC----
T ss_pred cCCCCcCCHHHCCCCCCCCCEEEEEEEecCCCCCEeEEEecCC--CCEEEEeecCCCCcCCc----ccccccCccc----
Confidence 47999999999999976 7999999999985 99999999875 79999976655555555 9999999997
Q ss_pred CCcccCCCCCCCCcceEEEecCcccCCceEEEEEEceeEEeeeCCccceEEEEEeCC--CccccCCCCcccccccChhHH
Q 022875 154 ANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLD--DPKAALVNDVDDVEKHFPGTL 231 (291)
Q Consensus 154 ~~~~~~g~~gDgDPLDVlvig~~~~~~G~v~~vrvlGvL~miDeGE~DwKIIaV~~~--Dp~~~~indi~Dv~~~~Pg~l 231 (291)
||||||||||||++|+.||++++|||||+|+|+|+||+|||||||+++ ||+|++|+|++||++ +++
T Consensus 86 ---------~DgDPLDvlvl~~~p~~pG~vi~~r~iGvl~MiDege~D~KIIaVp~~~~dp~~~~i~di~Dlp~---~~l 153 (197)
T 3fq3_A 86 ---------EDGDPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPE---ITL 153 (197)
T ss_dssp ---------TTSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCSTTTTCCSGGGSCH---HHH
T ss_pred ---------CCCCceEEEEEcCCCCCCceEEEEEEEEEEEEecCCCCccEEEEEECCCCCchhcccCchHHCCH---HHH
Confidence 999999999999999999999999999999999999999999999999 999999999999975 489
Q ss_pred HHHHHHHHhccCCC-CCcceEeecCCCCCCHHHHHHHHHHHHHHHHH
Q 022875 232 TAIRDWFRDYKIPD-GKPANKFGLGNKAADKDYALKVITETNESWAK 277 (291)
Q Consensus 232 ~~i~~wFr~YK~~e-GK~~n~~g~~~~~~~~~~A~~vI~e~~~~~~~ 277 (291)
++|+|||++||.++ ||++...||. ++++|+++|++||++|++
T Consensus 154 ~~I~~fF~~YK~le~~K~v~v~~~~----~~~~A~~~I~~~~~~~~~ 196 (197)
T 3fq3_A 154 KQIAHFFEHYKDLEPGKWVKIGDWG----DEDYARKFIVEAIERAKG 196 (197)
T ss_dssp HHHHHHHHHTTTTSTTCCEEECCCB----CHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHhcCcCCCCeEEeCCCC----CHHHHHHHHHHHHHHHhh
Confidence 99999999999998 8999988887 599999999999999975
No 5
>3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A*
Probab=100.00 E-value=4.1e-63 Score=440.66 Aligned_cols=176 Identities=33% Similarity=0.468 Sum_probs=157.9
Q ss_pred CCCCccCCCCCCCCCCC-CCeeEEEEEeCCCCC-ceEEEeccCCCCceeeeccCCeeeEeccccccccCccccccCCCCc
Q 022875 76 NSGKKVSPWHDIPLQLG-DGVFNFVVEIPKESS-AKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSF 153 (291)
Q Consensus 76 ~~g~~~SpwHDIPl~~~-~~~~n~VVEIPrgS~-aKyEi~k~~~~npI~qD~k~g~lr~yP~~~~~NYGfIPqTwedp~~ 153 (291)
.+|+++++||+||++.+ ++.|||||||||||+ +|||+++++ ++|++|+.....++||+ |||||||||+
T Consensus 16 ~~g~~~m~~~~i~~g~~~p~~vnvvIEIP~gs~~~KyE~dk~~--g~i~~DR~l~s~~~YP~----NYGfIP~Tl~---- 85 (196)
T 3gvf_A 16 TQGPGSMSFSNVPAGKDLPQDFNVIIEIPAQSEPVKYEADKAL--GLLVVDRFIGTGMRYPV----NYGFIPQTLS---- 85 (196)
T ss_dssp -------CGGGSCSCSBTTTBEEEEEEECTTCCSEEEEEETTT--TEEEEEEECTTCCCCSS----EEEECTTCCC----
T ss_pred ccCCCCCchhhCCCCCCCCCEEEEEEEecCCCCceEEEEecCC--CCEEEEeEcCCCccCCc----ccccccCccC----
Confidence 47999999999999865 799999999999998 999999876 69999987666666665 9999999997
Q ss_pred CCcccCCCCCCCCcceEEEecCcccCCceEEEEEEceeEEeeeCCccceEEEEEeCCC--ccccCCCCcccccccChhHH
Q 022875 154 ANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDD--PKAALVNDVDDVEKHFPGTL 231 (291)
Q Consensus 154 ~~~~~~g~~gDgDPLDVlvig~~~~~~G~v~~vrvlGvL~miDeGE~DwKIIaV~~~D--p~~~~indi~Dv~~~~Pg~l 231 (291)
||||||||||||++++.||++++|||||+|+|+|+||+|||||||+++| |+|++|+|++||++ +++
T Consensus 86 ---------~DgDPLDvlvl~~~p~~pG~vi~~r~iGvl~M~Dege~D~KIIaVp~~d~~p~~~~i~di~dlp~---~~l 153 (196)
T 3gvf_A 86 ---------GDGDPVDVLVITPFPLLAGSVVRARALGMLKMTDESGVDAKLVAVPHDKVCPMTANLKSIDDVPA---YLK 153 (196)
T ss_dssp ---------TTSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCGGGTTCCSGGGSCH---HHH
T ss_pred ---------CCCCceEEEEecCCccCCeeEEEEEEEEEEEEecCCCcccEEEEEecCCcCchhhhcCchhhCCH---HHH
Confidence 9999999999999999999999999999999999999999999999998 99999999999975 589
Q ss_pred HHHHHHHHhccCCC-CCcceEeecCCCCCCHHHHHHHHHHHHHHHHH
Q 022875 232 TAIRDWFRDYKIPD-GKPANKFGLGNKAADKDYALKVITETNESWAK 277 (291)
Q Consensus 232 ~~i~~wFr~YK~~e-GK~~n~~g~~~~~~~~~~A~~vI~e~~~~~~~ 277 (291)
++|+|||++||.+| ||+++..||. ++++|+++|++|+++|++
T Consensus 154 ~~I~~fF~~YK~le~gK~v~v~gw~----~~~~A~~~I~~~~~~y~~ 196 (196)
T 3gvf_A 154 DQIKHFFEQYKALEKGKWVKVEGWD----GIDAAHKEITDGVANFKK 196 (196)
T ss_dssp HHHHHHHHHTTTTSTTCCEEEEEEE----CHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCcCCCCeEEeccCc----CHHHHHHHHHHHHHHHhC
Confidence 99999999999998 9999999998 599999999999999964
No 6
>2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A*
Probab=100.00 E-value=2.9e-62 Score=429.06 Aligned_cols=169 Identities=26% Similarity=0.362 Sum_probs=158.4
Q ss_pred CCCCCCCCCC-CCeeEEEEEeCCCCC-ceEEEeccCCCCceeeeccCCeeeEeccccccccCccccccCCCCcCCcccCC
Q 022875 83 PWHDIPLQLG-DGVFNFVVEIPKESS-AKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEG 160 (291)
Q Consensus 83 pwHDIPl~~~-~~~~n~VVEIPrgS~-aKyEi~k~~~~npI~qD~k~g~lr~yP~~~~~NYGfIPqTwedp~~~~~~~~g 160 (291)
+||+||++.+ ++.|||||||||||+ +|||+++++ ++|+||+.....++|| ||||||||||+
T Consensus 1 ~~~~ip~~~~~p~~~nvvIEIP~gs~p~KyE~dk~~--g~i~~DR~l~~~~~YP----~NYGfIP~Tl~----------- 63 (175)
T 2au7_A 1 SLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKES--GALFVDQFMSTAMFYP----CNYGYINHTLS----------- 63 (175)
T ss_dssp CGGGCCSCSBTTTBEEEEEEECTTCCSEEEEECTTT--CCEEEEEECSSSCCCS----SEEEECTTCCC-----------
T ss_pred CcccCCCCCCCCCEEEEEEEecCCCCceeEEEecCC--CCEEEeeecCCCCcCC----cCcCccCCccC-----------
Confidence 6999999876 589999999999999 999999886 7999997665555555 59999999998
Q ss_pred CCCCCCcceEEEecCcccCCceEEEEEEceeEEeeeCCccceEEEEEeCC--CccccCCCCcccccccChhHHHHHHHHH
Q 022875 161 AFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLD--DPKAALVNDVDDVEKHFPGTLTAIRDWF 238 (291)
Q Consensus 161 ~~gDgDPLDVlvig~~~~~~G~v~~vrvlGvL~miDeGE~DwKIIaV~~~--Dp~~~~indi~Dv~~~~Pg~l~~i~~wF 238 (291)
|||||||||||+++|+.+|++++|||||+|+|+|+||.|||||||+++ ||+|++|||++||+++ ++++|+|||
T Consensus 64 --~DgDPlDvlvl~~~p~~pG~vi~~r~iGvl~m~Deg~~D~KiiaV~~~k~dp~~~~i~di~Dl~~~---~l~~i~~fF 138 (175)
T 2au7_A 64 --LDGDPVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPEL---LKAQIAHFF 138 (175)
T ss_dssp --TTSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEECCEEEEEECTTTCSTTTTCCSGGGSCHH---HHHHHHHHH
T ss_pred --CCCCceEEEEECCCCCCCceEEEEEEEEEEEeecCCCCccEEEEEeCCCCCcchhhCCChHHCCHH---HHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999976 799999999
Q ss_pred HhccCCC-CCcceEeecCCCCCCHHHHHHHHHHHHHHHHH
Q 022875 239 RDYKIPD-GKPANKFGLGNKAADKDYALKVITETNESWAK 277 (291)
Q Consensus 239 r~YK~~e-GK~~n~~g~~~~~~~~~~A~~vI~e~~~~~~~ 277 (291)
++||.++ ||+++++||. ++++|+++|++||++|++
T Consensus 139 ~~YK~le~gK~v~v~gw~----~~~~A~~~I~~~~~~~~~ 174 (175)
T 2au7_A 139 EHYKDLEKGKWVKVEGWE----NAEAAKAEIVASFERAKN 174 (175)
T ss_dssp HHTTTTSTTCCEEEEEEE----CHHHHHHHHHHHHHHHHH
T ss_pred HHhhCccCCCCeEEcccc----CHHHHHHHHHHHHHHHHh
Confidence 9999999 9999999998 599999999999999986
No 7
>3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A
Probab=100.00 E-value=6e-62 Score=434.02 Aligned_cols=176 Identities=27% Similarity=0.336 Sum_probs=153.3
Q ss_pred CCCCccCCCCCCCCCCC-CCeeEEEEEeCCCC-CceEEEeccCCCCceeeeccCCeeeEeccccccccCccccccCCCCc
Q 022875 76 NSGKKVSPWHDIPLQLG-DGVFNFVVEIPKES-SAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSF 153 (291)
Q Consensus 76 ~~g~~~SpwHDIPl~~~-~~~~n~VVEIPrgS-~aKyEi~k~~~~npI~qD~k~g~lr~yP~~~~~NYGfIPqTwedp~~ 153 (291)
.+|+++++||+||++.+ ++.||||||||||| ++|||+++++ ++|++|+.....++|| ||||||||||+
T Consensus 16 ~~g~~~m~~~~i~~g~~~p~~vnvvIEIP~gs~~~KyE~dk~~--G~l~~DR~l~~~~~YP----~NYGfIP~Tl~---- 85 (199)
T 3ld3_A 16 TQGPGSMNLDDIGSGSNAPEEVNVVIEVSQDSHPVKYEFDEKN--GALWVDRFLPTAMYYP----CNYGFIPNTIA---- 85 (199)
T ss_dssp ----------CCCSCTTTTTSEEEEEEECTTCCSEEEEECTTT--CCEEEEEECSSSBCCS----SEEEECTTCCC----
T ss_pred cCCCccCChHHCCCCCCCCCEEEEEEEecCCCCCEEEEEecCC--CCEEEEEEcCCCCcCC----ccccccccccc----
Confidence 57999999999999865 79999999999998 5999999876 6899997655555555 59999999997
Q ss_pred CCcccCCCCCCCCcceEEEecCcccCCceEEEEEEceeEEeeeCCccceEEEEEeCC--CccccCCCCcccccccChhHH
Q 022875 154 ANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLD--DPKAALVNDVDDVEKHFPGTL 231 (291)
Q Consensus 154 ~~~~~~g~~gDgDPLDVlvig~~~~~~G~v~~vrvlGvL~miDeGE~DwKIIaV~~~--Dp~~~~indi~Dv~~~~Pg~l 231 (291)
||||||||||||++|+.||+|++|||||+|+|+|+||+|||||||+++ ||+|++|+|++||+ |+++
T Consensus 86 ---------~DGDPLDvlvl~~~p~~pG~vi~vr~IGvl~MiDege~D~KIIaVp~~~~dp~~~~i~di~Dlp---~~~l 153 (199)
T 3ld3_A 86 ---------GDGDPVDVLVLARFPVMPGAVICVRPVGVLMMNDEKGEDAKVLAVPATKVDQYYGNIVNYSDLP---SSFL 153 (199)
T ss_dssp ---------TTSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEECCEEEEEECTTTCGGGTTCCSGGGSC---HHHH
T ss_pred ---------CCCCceEEEEecCCCCCCceEEEEEEEEEEEEecCCCCcceEEEEECCCCCccccccCchHHCC---HHHH
Confidence 999999999999999999999999999999999999999999999999 99999999999997 4589
Q ss_pred HHHHHHHHhccCCC-CCcceEeecCCCCCCHHHHHHHHHHHHHHHHH
Q 022875 232 TAIRDWFRDYKIPD-GKPANKFGLGNKAADKDYALKVITETNESWAK 277 (291)
Q Consensus 232 ~~i~~wFr~YK~~e-GK~~n~~g~~~~~~~~~~A~~vI~e~~~~~~~ 277 (291)
++|+|||++||.++ ||++...||. ++++|+++|++||++|++
T Consensus 154 ~~I~~fF~~YK~le~gK~v~v~gw~----~~~~A~~~I~~~~~~~~~ 196 (199)
T 3ld3_A 154 DSISHFFSFYKKLEKDKFVSVGCWQ----DAASAKELIRSAIIAAKK 196 (199)
T ss_dssp HHHHHHHHHTTTTSTTCCEEEEEEE----EHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCcCCCceEEecCCC----CHHHHHHHHHHHHHHHHh
Confidence 99999999999987 7999999998 599999999999999985
No 8
>2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A
Probab=100.00 E-value=1.8e-61 Score=423.35 Aligned_cols=169 Identities=30% Similarity=0.504 Sum_probs=153.5
Q ss_pred CCCCCCCCCCCCeeEEEEEeCCCCCceEEEeccCCCCceeeeccCCeeeEeccccccccCccccccCCCCcCCcccCCCC
Q 022875 83 PWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAF 162 (291)
Q Consensus 83 pwHDIPl~~~~~~~n~VVEIPrgS~aKyEi~k~~~~npI~qD~k~g~lr~yP~~~~~NYGfIPqTwedp~~~~~~~~g~~ 162 (291)
+||+||++.+++.||||||||+||++|||++++. ++|++|+..+..++||+ |||||||||+
T Consensus 2 ~~~~ip~~~~p~~~nvvIEIP~gs~~KyE~dk~~--g~i~~DR~l~~~~~YP~----NYGfIP~Tl~------------- 62 (173)
T 2bqx_A 2 NLEKLEVSHDADSLCVVIEISKHSNIKYELDKES--GALMVDRVLYGAQNYPA----NYGFVPNTLG------------- 62 (173)
T ss_dssp -----CCCEETTEEEEEEEECTTCSEEEEECTTT--CCEEEEEECSSSCCCSS----EEEECSSCCC-------------
T ss_pred CcccCCCCCCCCeEEEEEEECCCCCeEEEEecCC--CCEEEeeecCCCCcCcc----cccccccccC-------------
Confidence 7999999977999999999999999999999874 79999987665555665 9999999997
Q ss_pred CCCCcceEEEecCcccCCceEEEEEEceeEEeeeCCccceEEEEEeCC--CccccCCCCcccccccChhHHHHHHHHHHh
Q 022875 163 GDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLD--DPKAALVNDVDDVEKHFPGTLTAIRDWFRD 240 (291)
Q Consensus 163 gDgDPLDVlvig~~~~~~G~v~~vrvlGvL~miDeGE~DwKIIaV~~~--Dp~~~~indi~Dv~~~~Pg~l~~i~~wFr~ 240 (291)
||||||||||||++|+.+|++++|||||+|+|+|+||.|||||||+++ ||+|++++|++||+++ ++++|+|||++
T Consensus 63 ~DgDPlDvlvl~~~p~~~G~vi~~r~iGvl~m~D~g~~D~KiiaV~~~k~dp~~~~i~di~Dl~~~---~l~~i~~fF~~ 139 (173)
T 2bqx_A 63 SDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLIALPIDKIDPTHSYVKDIDDLSKH---TLDKIKHFFET 139 (173)
T ss_dssp TTSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCCTTTTCCSGGGSCHH---HHHHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCCceEEEEEEEEEEEeccCCCCccEEEEEeCCCCCcchhhcCChhHCCHH---HHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999976 79999999999
Q ss_pred ccCCC-CCcceEeecCCCCCCHHHHHHHHHHHHHHHHH
Q 022875 241 YKIPD-GKPANKFGLGNKAADKDYALKVITETNESWAK 277 (291)
Q Consensus 241 YK~~e-GK~~n~~g~~~~~~~~~~A~~vI~e~~~~~~~ 277 (291)
||.++ ||+++..||.+ +++|+++|++||++|++
T Consensus 140 YK~le~gK~v~~~g~~~----~~~A~~~I~~~~~~~~~ 173 (173)
T 2bqx_A 140 YKDLEPNKWVKVKGFEN----KESAIKVLEKAIKAYQG 173 (173)
T ss_dssp TTTTSTTCCEEEEEEEE----HHHHHHHHHHHHHHHC-
T ss_pred hccccCCCceeeCcCcC----HHHHHHHHHHHHHHHhC
Confidence 99999 99999999985 89999999999999964
No 9
>3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} SCOP: b.40.5.0
Probab=100.00 E-value=4.1e-61 Score=422.71 Aligned_cols=167 Identities=27% Similarity=0.360 Sum_probs=153.6
Q ss_pred CCCCCCCCCCeeEEEEEeCCCCC-ceEEEeccCCCCceeeeccCCeeeEeccccccccCccccccCCCCcCCcccCCCCC
Q 022875 85 HDIPLQLGDGVFNFVVEIPKESS-AKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFG 163 (291)
Q Consensus 85 HDIPl~~~~~~~n~VVEIPrgS~-aKyEi~k~~~~npI~qD~k~g~lr~yP~~~~~NYGfIPqTwedp~~~~~~~~g~~g 163 (291)
|+||++.+.+.|||||||||||+ +|||+++++ ++|+||+.....++||+ |||||||||+ |
T Consensus 6 h~ip~g~~~~~vnvvIEIP~gs~~~KyE~dk~~--g~i~~DR~l~~~~~YP~----NYGfIP~Tl~-------------~ 66 (178)
T 3tr4_A 6 FLVSAGKGIDDFNVIIEIPANGGEVKYEYDKEL--GFLTVDRFMPTSMRYPC----NYGFVPSTLA-------------Q 66 (178)
T ss_dssp --CCCEEETTEEEEEEEECTTCCSEEEEEETTT--TEEEEEEECCSSBCCSS----EEEECTTCCC-------------T
T ss_pred ccCCCCCCCCEEEEEEEecCCCCcEEEEEecCC--CcEEEEEecCcCccCCc----cccccCCccc-------------C
Confidence 99999876699999999999999 999999875 79999977665555555 9999999997 9
Q ss_pred CCCcceEEEecCcccCCceEEEEEEceeEEeeeCCccceEEEEEeCC--CccccCCCCcccccccChhHHHHHHHHHHhc
Q 022875 164 DNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLD--DPKAALVNDVDDVEKHFPGTLTAIRDWFRDY 241 (291)
Q Consensus 164 DgDPLDVlvig~~~~~~G~v~~vrvlGvL~miDeGE~DwKIIaV~~~--Dp~~~~indi~Dv~~~~Pg~l~~i~~wFr~Y 241 (291)
|||||||||||++++.||++++|||||+|+|+|+||+|||||||+++ ||+|++|+|++||++ +++++|+|||++|
T Consensus 67 DgDPlDvlvl~~~p~~pG~vi~~r~iGvl~m~Dege~D~KiIaVp~~~~dp~~~~i~di~dl~~---~~l~~i~~fF~~Y 143 (178)
T 3tr4_A 67 DGDPLDVLVLTPVPVQPGVLMRVRALGIMKMEDEAGEDSKVLAVPVVKACRAYEAIQSLKDISS---LLLDAISHFFERY 143 (178)
T ss_dssp TSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEECCEEEEEECTTTCGGGTTCCSGGGSCH---HHHHHHHHHHHHT
T ss_pred CCCceEEEEECCCCCCCeeEEEEEEEEEEEeccCCCCcceEEEEEcCCCCchhhhcCchhhCCH---HHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 899999999999974 5899999999999
Q ss_pred cCCC-CCcceEeecCCCCCCHHHHHHHHHHHHHHHHH
Q 022875 242 KIPD-GKPANKFGLGNKAADKDYALKVITETNESWAK 277 (291)
Q Consensus 242 K~~e-GK~~n~~g~~~~~~~~~~A~~vI~e~~~~~~~ 277 (291)
|.++ ||+++..||. ++++|+++|++||++|++
T Consensus 144 K~le~gK~v~~~g~~----~~~~A~~~I~~~~~~~~~ 176 (178)
T 3tr4_A 144 KDLEPNKWAKVKGWE----DKEAAKKEFEASIVRFKE 176 (178)
T ss_dssp TTTSTTCCEEEEEEE----CHHHHHHHHHHHHHHHHC
T ss_pred cCcCCCceeEeccCc----CHHHHHHHHHHHHHHHHh
Confidence 9988 6999999997 599999999999999986
No 10
>3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A*
Probab=100.00 E-value=6.8e-61 Score=419.69 Aligned_cols=166 Identities=29% Similarity=0.421 Sum_probs=156.1
Q ss_pred CCCCCCCCCCCCeeEEEEEeCCCCC-ceEEEeccCCCCceeeeccCCeeeEeccccccccCccccccCCCCcCCcccCCC
Q 022875 83 PWHDIPLQLGDGVFNFVVEIPKESS-AKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGA 161 (291)
Q Consensus 83 pwHDIPl~~~~~~~n~VVEIPrgS~-aKyEi~k~~~~npI~qD~k~g~lr~yP~~~~~NYGfIPqTwedp~~~~~~~~g~ 161 (291)
+||+||++.+++.|||||||||||+ +|||+++++ ++|++|+.....++||+ |||||||||+
T Consensus 3 ~~~~ip~~~~p~~~nvvIEIP~gs~p~KyE~dk~~--g~i~~DR~l~~~~~YP~----NYGfIP~Tl~------------ 64 (173)
T 3d53_A 3 FIKKIKAKANNNEINVIIEIPMNSGPIKYEFDKES--GALFVDRFMQTTMSYPC----NYGFIPDTLS------------ 64 (173)
T ss_dssp CGGGSCSCSSTTCEEEEEEECTTCCSEEEEECTTT--CCEEEEEECCSSCCCSS----EEEECTTCCC------------
T ss_pred chhhCCCCCCCCeEEEEEEeCCCCCceeEEEecCC--CCEEEeeecCCCCcCCc----ccchhhCCcc------------
Confidence 8999999977999999999999999 999999876 69999987665556665 9999999998
Q ss_pred CCCCCcceEEEecCcccCCceEEEEEEceeEEeeeCCccceEEEEEeCC--CccccCCCCcccccccChhHHHHHHHHHH
Q 022875 162 FGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLD--DPKAALVNDVDDVEKHFPGTLTAIRDWFR 239 (291)
Q Consensus 162 ~gDgDPLDVlvig~~~~~~G~v~~vrvlGvL~miDeGE~DwKIIaV~~~--Dp~~~~indi~Dv~~~~Pg~l~~i~~wFr 239 (291)
|||||||||||+++++.+|++++|||||+|+|+|+||.|||||||+++ ||+|++|+|++||+++ ++++|+|||+
T Consensus 65 -~DgDPlDvlvl~~~p~~~G~vi~~r~iGvl~m~Dege~D~KiiaV~~~k~dp~~~~i~di~Dl~~~---~l~~i~~fF~ 140 (173)
T 3d53_A 65 -NDGDPVDVLVVAHHPVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEM---LKKRIVHFFE 140 (173)
T ss_dssp -TTSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCGGGTTCCSGGGSCHH---HHHHHHHHHH
T ss_pred -CCCCceEEEEECCCccCCceEEEEEEEEEEEEccCCCccceEEEEeCCCCCcchhhcCChhHCCHH---HHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999976 7999999999
Q ss_pred hccCCC-CCcceEeecCCCCCCHHHHHHHHHHHHHH
Q 022875 240 DYKIPD-GKPANKFGLGNKAADKDYALKVITETNES 274 (291)
Q Consensus 240 ~YK~~e-GK~~n~~g~~~~~~~~~~A~~vI~e~~~~ 274 (291)
+||.++ ||++++.||. ++++|+++|++||++
T Consensus 141 ~YK~le~gK~v~v~gw~----~~~~A~~~I~~~~~~ 172 (173)
T 3d53_A 141 HYKDLEKGKWVKVTGWG----DKVKAETLIKEGIDR 172 (173)
T ss_dssp HTTTTSTTCCEEEEEEE----CHHHHHHHHHHHHHC
T ss_pred HHcCccCCCcEEEccCc----CHHHHHHHHHHHHhc
Confidence 999999 9999999998 489999999999974
No 11
>1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1
Probab=100.00 E-value=1.4e-59 Score=411.47 Aligned_cols=166 Identities=35% Similarity=0.496 Sum_probs=152.6
Q ss_pred cCCCCCCCCCCCCCeeEEEEEeCCCCCceEEEeccCCCCceeeeccCCeeeEeccccccccCccccccCCCCcCCcccCC
Q 022875 81 VSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEG 160 (291)
Q Consensus 81 ~SpwHDIPl~~~~~~~n~VVEIPrgS~aKyEi~k~~~~npI~qD~k~g~lr~yP~~~~~NYGfIPqTwedp~~~~~~~~g 160 (291)
++++++.| +.||||||||+||++|||++++. ++|++|+.....++||+ |||||||||+
T Consensus 3 i~~g~~~p-----~~~nvvIEIP~gs~~KyE~dk~~--g~l~~DR~l~~~~~YP~----NYGfIP~Tl~----------- 60 (173)
T 1qez_A 3 LSPGKNAP-----DVVNVLVEIPQGSNIKYEYDDEE--GVIKVDRVLYTSMNYPF----NYGFIPGTLE----------- 60 (173)
T ss_dssp CCSCTTTT-----TSEEEEEEECTTCCEEEEEETTT--TEEEEEEECSSSBCCSS----EEEECTTCCC-----------
T ss_pred cCCCCCCC-----CeEEEEEEECCCCCeEEEEecCC--CCEEEEeecCCCCcCCc----cccccccccC-----------
Confidence 55666655 78999999999999999999875 68999986665555665 9999999998
Q ss_pred CCCCCCcceEEEecCcccCCceEEEEEEceeEEeeeCCccceEEEEEeCC--CccccCCCCcccccccChhHHHHHHHHH
Q 022875 161 AFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLD--DPKAALVNDVDDVEKHFPGTLTAIRDWF 238 (291)
Q Consensus 161 ~~gDgDPLDVlvig~~~~~~G~v~~vrvlGvL~miDeGE~DwKIIaV~~~--Dp~~~~indi~Dv~~~~Pg~l~~i~~wF 238 (291)
|||||||||||+++|+.+|++++|||||+|+|+|+||.|||||||+++ ||+|++|+|++||+++ ++++|+|||
T Consensus 61 --~DgDPlDvlvl~~~p~~~G~vi~~r~iGvl~m~Dege~D~KiiaV~~~k~dp~~~~i~di~Dl~~~---~l~~i~~fF 135 (173)
T 1qez_A 61 --EDGDPLDVLVITNYQLYPGSVIEVRPIGILYMKDEEGEDAKIVAVPKDKTDPSFSNIKDINDLPQA---TKNKIVHFF 135 (173)
T ss_dssp --TTSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCGGGTTCCSGGGSCHH---HHHHHHHHH
T ss_pred --CCCCceEEEEECCCCCCCccEEEEEEEEEEEeecCCCcccEEEEEeCCCCCcchhhcCChHHCCHH---HHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999976 799999999
Q ss_pred HhccCCC-CCcceEeecCCCCCCHHHHHHHHHHHHHHHHH
Q 022875 239 RDYKIPD-GKPANKFGLGNKAADKDYALKVITETNESWAK 277 (291)
Q Consensus 239 r~YK~~e-GK~~n~~g~~~~~~~~~~A~~vI~e~~~~~~~ 277 (291)
++||.++ ||+++..||. ++++|+++|++||++|++
T Consensus 136 ~~YK~le~gK~v~~~gw~----~~~~A~~~I~~~~~~~~~ 171 (173)
T 1qez_A 136 EHYKELEPGKYVKISGWG----SATEAKNRIQLAIKRVSG 171 (173)
T ss_dssp HHTTTTSTTCCEEEEEEE----CHHHHHHHHHHHHHHHC-
T ss_pred HHhccccCCCceEEcccc----CHHHHHHHHHHHHHHHHh
Confidence 9999999 9999999998 499999999999999986
No 12
>1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A
Probab=100.00 E-value=5.5e-58 Score=400.83 Aligned_cols=158 Identities=26% Similarity=0.384 Sum_probs=143.8
Q ss_pred CeeEEEEEeCCCCCceEEEeccCCCCceeeeccCCeeeEeccccccccCccccccCCCCcCCcccCCCCCCCCcceEEEe
Q 022875 94 GVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEI 173 (291)
Q Consensus 94 ~~~n~VVEIPrgS~aKyEi~k~~~~npI~qD~k~g~lr~yP~~~~~NYGfIPqTwedp~~~~~~~~g~~gDgDPLDVlvi 173 (291)
-.|||||||||||++|||+|++. +.+++|+.... +..||||||||||||+ |||||||||||
T Consensus 11 ~~~nvvIEIP~gs~~KyE~Dk~~--G~l~~DR~l~~----~~~YP~NYGfIP~Tl~-------------~DGDPlDvlvl 71 (172)
T 1sxv_A 11 MQFDVTIEIPKGQRNKYEVDHET--GRVRLDRYLYT----PMAYPTDYGFIEDTLG-------------DDGDPLDALVL 71 (172)
T ss_dssp CCEEEEEEECTTCCEEC-CCTTT--CCCCCCEECSS----SCCCSSEEEEETTCCC-------------TTSSCCEEEEC
T ss_pred eEEEEEEEECCCCCeEEEEEcCC--CCEEEEeecCC----CCCCCcCcCccCCccC-------------CCCCCeEEEEE
Confidence 46999999999999999998764 46777764433 3345669999999997 99999999999
Q ss_pred cCcccCCceEEEEEEceeEEeeeCCccceEEEEEeCCCccccCCCCcccccccChhHHHHHHHHHHhccCCC-CCcceEe
Q 022875 174 GERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPGTLTAIRDWFRDYKIPD-GKPANKF 252 (291)
Q Consensus 174 g~~~~~~G~v~~vrvlGvL~miDeGE~DwKIIaV~~~Dp~~~~indi~Dv~~~~Pg~l~~i~~wFr~YK~~e-GK~~n~~ 252 (291)
|++|+.||++++|||||+|+|+|+||.|||||||+++||+|++|||++||+++ ++++|++||++||.++ ||+++..
T Consensus 72 ~~~p~~pG~vi~~r~iGvl~m~Dege~D~KIIaVp~~Dp~~~~i~di~Dlp~~---~l~~I~~fF~~YK~le~gK~v~v~ 148 (172)
T 1sxv_A 72 LPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAF---ELDAIKHFFVHYKDLEPGKFVKAA 148 (172)
T ss_dssp CSSCCCTTCEEEEEEEEEEEEEETTEECCEEEEEETTCGGGTTCCSGGGSCHH---HHHHHHHHHHHTTTTSTTCCEEEE
T ss_pred cCCCcCCceEEEEEEEEEEEecCCCCCCCEEEEEeCCCCCccccCChHHCCHH---HHHHHHHHHHHhcCcCCCCeEEeC
Confidence 99999999999999999999999999999999999999999999999999987 7999999999999999 9999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHHH
Q 022875 253 GLGNKAADKDYALKVITETNESWAK 277 (291)
Q Consensus 253 g~~~~~~~~~~A~~vI~e~~~~~~~ 277 (291)
||. ++++|+++|++|+++|++
T Consensus 149 gw~----~~~~A~~~I~~~~~~~~~ 169 (172)
T 1sxv_A 149 DWV----DRAEAEAEVQRSVERFKA 169 (172)
T ss_dssp EEE----CHHHHHHHHHHHHHHHHC
T ss_pred CCC----CHHHHHHHHHHHHHHHHH
Confidence 998 599999999999999986
No 13
>1x5s_A Cold-inducible RNA-binding protein; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.22 E-value=61 Score=23.40 Aligned_cols=43 Identities=16% Similarity=0.214 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhccCCC---------CCcceEeecCCCCCCHHHHHHHHHHHHH
Q 022875 230 TLTAIRDWFRDYKIPD---------GKPANKFGLGNKAADKDYALKVITETNE 273 (291)
Q Consensus 230 ~l~~i~~wFr~YK~~e---------GK~~n~~g~~~~~~~~~~A~~vI~e~~~ 273 (291)
.-++|+++|..|-... .....-++|- +|.+.+.|.+.|+..+.
T Consensus 25 t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV-~f~~~~~A~~A~~~l~g 76 (102)
T 1x5s_A 25 NEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFV-TFENIDDAKDAMMAMNG 76 (102)
T ss_dssp CHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEE-ECSSHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEE-EECCHHHHHHHHHHhCC
Confidence 3578899999983221 1111225665 47789999998876553
No 14
>4gio_A Putative lipoprotein; unknown function; 1.90A {Campylobacter jejuni subsp}
Probab=26.35 E-value=32 Score=27.09 Aligned_cols=48 Identities=10% Similarity=0.331 Sum_probs=29.6
Q ss_pred CCcceEEEEEcCCCCcc-----CCCCCCCCCCCC-CeeEEEEEeCCCCCceEEE
Q 022875 65 ETLDYRVFFVNNSGKKV-----SPWHDIPLQLGD-GVFNFVVEIPKESSAKMEV 112 (291)
Q Consensus 65 ~t~~~r~~~~~~~g~~~-----SpwHDIPl~~~~-~~~n~VVEIPrgS~aKyEi 112 (291)
-+..||+|..|++|-.+ ++|+-+.|.+.. -.+..|-=-|+.++-+.+|
T Consensus 50 ~~l~Yrf~WyD~~G~~v~~~~~~~W~~~~l~g~~~~~i~~vap~~~A~~fRl~i 103 (107)
T 4gio_A 50 KDVIYKVDWLDKDGFVLRDVLNEDYQALRIPAGQEVILRKLASDTRANDFRLEI 103 (107)
T ss_dssp EEEEEEEEEECTTSCBCCSSCCCCCEEEEECTTCCEEEEEECSSTTCCEEEEEE
T ss_pred eEEEEEEEEECCCCCCcCCCCCCCCEEEEEcCCCeEEEEEECCCCCeEEEEEEE
Confidence 35789999999999765 579988776542 3333333334444444444
No 15
>2ek1_A RNA-binding protein 12; RNA recognition motif, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} PDB: 2ek6_A
Probab=22.68 E-value=88 Score=22.09 Aligned_cols=42 Identities=19% Similarity=0.304 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhccCCCC-C--------cceEeecCCCCCCHHHHHHHHHHHH
Q 022875 230 TLTAIRDWFRDYKIPDG-K--------PANKFGLGNKAADKDYALKVITETN 272 (291)
Q Consensus 230 ~l~~i~~wFr~YK~~eG-K--------~~n~~g~~~~~~~~~~A~~vI~e~~ 272 (291)
.-++|+++|..|-.... + ...-++|- +|.+.+.|.+.|++.+
T Consensus 28 t~~~l~~~F~~~G~i~~~~~~~~~~~g~~~g~afV-~f~~~~~a~~Ai~~l~ 78 (95)
T 2ek1_A 28 SIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMV-AFESRDEATAAVIDLN 78 (95)
T ss_dssp CHHHHHHHTTTSCBCTTCCEEEECTTSCEEEEEEE-EESSHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCccceEEEEeCCCCCEeeEEEE-EECCHHHHHHHHHHhC
Confidence 35789999998864321 1 12345665 4678999998887544
No 16
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=22.19 E-value=1.1e+02 Score=21.08 Aligned_cols=42 Identities=24% Similarity=0.220 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhccCC----------CCCcceEeecCCCCCCHHHHHHHHHHHHH
Q 022875 230 TLTAIRDWFRDYKIP----------DGKPANKFGLGNKAADKDYALKVITETNE 273 (291)
Q Consensus 230 ~l~~i~~wFr~YK~~----------eGK~~n~~g~~~~~~~~~~A~~vI~e~~~ 273 (291)
.-++|+++|..|-.. .|+ ..-+||- +|.+.+.|.+.|+..+.
T Consensus 19 t~~~l~~~F~~~G~i~~v~i~~~~~~~~-~~g~afV-~f~~~~~A~~A~~~l~g 70 (87)
T 3bs9_A 19 TTAAIAAAFAPFGRISDARVVKDMATGK-SKGYGFV-SFFNKWDAENAIQQMGG 70 (87)
T ss_dssp CHHHHHHHHGGGSCEEEEEEEECTTTCC-EEEEEEE-EESSHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHhcCCEeEEEEEecCCCCc-cceEEEE-EECCHHHHHHHHHHcCC
Confidence 357899999988321 122 2336665 47789999998876553
No 17
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.04 E-value=50 Score=23.51 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhccCCC-CCcceEeecCCCCCCHHHHHHHHHHHHH
Q 022875 230 TLTAIRDWFRDYKIPD-GKPANKFGLGNKAADKDYALKVITETNE 273 (291)
Q Consensus 230 ~l~~i~~wFr~YK~~e-GK~~n~~g~~~~~~~~~~A~~vI~e~~~ 273 (291)
.-++|+++|..|-... =+-...++|- +|.+.+.|.+.|+..+.
T Consensus 23 t~~~l~~~F~~~G~v~~v~~~~~~afV-~f~~~~~a~~A~~~l~g 66 (92)
T 2dgt_A 23 TNQELRAKFEEYGPVIECDIVKDYAFV-HMERAEDAVEAIRGLDN 66 (92)
T ss_dssp CHHHHHHHHHTTSCCCEEEECSSEEEE-EESCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHhcCCeEEEEEECCEEEE-EECCHHHHHHHHHHhCC
Confidence 4578999999995332 1222336766 47789999988876543
No 18
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=21.64 E-value=1.2e+02 Score=22.46 Aligned_cols=42 Identities=14% Similarity=0.061 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhccCCC----------CCcceEeecCCCCCCHHHHHHHHHHHHH
Q 022875 230 TLTAIRDWFRDYKIPD----------GKPANKFGLGNKAADKDYALKVITETNE 273 (291)
Q Consensus 230 ~l~~i~~wFr~YK~~e----------GK~~n~~g~~~~~~~~~~A~~vI~e~~~ 273 (291)
.-++|+++|..|-... |+ -.-++|- +|.+.+.|.+.|+..+.
T Consensus 38 t~~~l~~~F~~~G~i~~v~i~~~~~~g~-~~g~afV-~f~~~~~a~~A~~~l~g 89 (115)
T 2cpz_A 38 GDQDLLQMFMPFGNVVSAKVFIDKQTNL-SKCFGFV-SYDNPVSAQAAIQSMNG 89 (115)
T ss_dssp CHHHHHHHHGGGSCCSEEEEEECSSSCS-EEEEEEE-ECSSHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHhcCCeEEEEEEECCCCCC-cCccEEE-EECCHHHHHHHHHHcCC
Confidence 3588999999984321 22 2336766 57789999998876544
No 19
>2cqh_A IGF-II mRNA-binding protein 2 isoform A; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.24 E-value=1.6e+02 Score=20.71 Aligned_cols=43 Identities=21% Similarity=0.404 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhccC-CCCCcc--eEeecCCCCCCHHHHHHHHHHHHH
Q 022875 230 TLTAIRDWFRDYKI-PDGKPA--NKFGLGNKAADKDYALKVITETNE 273 (291)
Q Consensus 230 ~l~~i~~wFr~YK~-~eGK~~--n~~g~~~~~~~~~~A~~vI~e~~~ 273 (291)
.-++|+++|..|-. .+...+ .-+||- +|.+.+.|.+.|++.+.
T Consensus 21 t~~~l~~~F~~~G~vv~~~~~~~~g~afV-~f~~~~~A~~A~~~l~g 66 (93)
T 2cqh_A 21 TADDLRQLFGDRKLPLAGQVLLKSGYAFV-DYPDQNWAIRAIETLSG 66 (93)
T ss_dssp CHHHHHHHHHHTTCCCSSCEEEETTEEEE-CCSCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCceEEEEEcCCCEEEE-EECCHHHHHHHHHHccC
Confidence 45789999999975 443222 225665 47789999988876654
No 20
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.61 E-value=1e+02 Score=22.11 Aligned_cols=41 Identities=15% Similarity=0.064 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhccCCC----------CCcceEeecCCCCCCHHHHHHHHHHHH
Q 022875 230 TLTAIRDWFRDYKIPD----------GKPANKFGLGNKAADKDYALKVITETN 272 (291)
Q Consensus 230 ~l~~i~~wFr~YK~~e----------GK~~n~~g~~~~~~~~~~A~~vI~e~~ 272 (291)
.-++|+++|..|-... |+ ..-++|- +|.+.+.|.+.|+..+
T Consensus 25 t~~~l~~~f~~~G~i~~v~i~~~~~~~~-~~g~afV-~f~~~~~A~~A~~~l~ 75 (102)
T 2cqb_A 25 DDKVLHAAFIPFGDITDIQIPLDYETEK-HRGFAFV-EFELAEDAAAAIDNMN 75 (102)
T ss_dssp CHHHHHHHHTTTSCCCCEECCCCSSSCC-CSSEEEE-CCSSHHHHHHHHHHHT
T ss_pred CHHHHHHHhhccCCEEEEEEEecCCCCC-cceEEEE-EECCHHHHHHHHHHhC
Confidence 3588999999984221 11 2336666 5778999998887654
Done!