BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022879
(290 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 277 bits (708), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 147/290 (50%), Positives = 192/290 (66%), Gaps = 4/290 (1%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
MVIGHE +G + KVG VK L GDRVA+EPG+ C RC CK G+YNLCP++ F ATPP
Sbjct: 62 MVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPD 121
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
G+LA VH AD C KLPDNVSLEEGA+ EPLSVGVHACRRA + T VL++GAGPIG
Sbjct: 122 DGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIG 181
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
LV++LAA+A+GA +V RL VAK GAD + V ++ + +E+I+ A+G
Sbjct: 182 LVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDL 240
Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
+V+ DC+G K ++ + T GG + LVGMG +TVPL A RE+D+ VFRY N
Sbjct: 241 PNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCND 300
Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS-ARGGTAIKVMFN 289
+P+ LE++ SG+ +VK LVTH F Q +AFE + + IKVM +
Sbjct: 301 YPIALEMVASGRCNVKQLVTHSFKLEQ--TVDAFEAARKKADNTIKVMIS 348
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 274 bits (701), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 144/290 (49%), Positives = 199/290 (68%), Gaps = 7/290 (2%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
MV+GHE +G + KVGS V+ L PGDRVA++PG + CK GRYNL P + F ATPP
Sbjct: 64 MVLGHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPD 123
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
G+L H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA + VL+ GAGPIG
Sbjct: 124 DGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIG 183
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGT 179
LV +LAA+A GA ++V+ D+ RLS AKE+GAD I+++S + ++IA++VE + +G+
Sbjct: 184 LVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGL---LGS 240
Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
+V+ +C G+ ++ + AT +GG + LVG+G +VPL AA REVD+ GVFRY N
Sbjct: 241 KPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCN 300
Query: 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
TWP+ + +L S ++VKPLVTHRF ++ EAFETS + G +KVM
Sbjct: 301 TWPMAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVMIK 347
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 273 bits (697), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 145/290 (50%), Positives = 194/290 (66%), Gaps = 7/290 (2%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
MV+GHE +G +EKVGS VK L PGDRVA+EPG + CK GRYNL P + F ATPP
Sbjct: 65 MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
G+L H A C+KLPDNV+ EEGA+ EPLSVG+HACRR + VL+ GAGPIG
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 184
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGT 179
+VT+L A+A GA ++V+ D+ RLS AKEIGAD ++++S + Q+IA +VE +G
Sbjct: 185 MVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGC 241
Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
+V+ +C G ++ + AT +GG + LVG+G TVPL AA+REVD+ GVFRY N
Sbjct: 242 KPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCN 301
Query: 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
TWP+ + +L S ++VKPLVTHRF ++ EAFET + G +K+M
Sbjct: 302 TWPVAISMLASKSVNVKPLVTHRFPL--EKALEAFETFKK-GLGLKIMLK 348
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 142/280 (50%), Positives = 187/280 (66%), Gaps = 6/280 (2%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
V+GHE +G +EKVGS VK L PGDRVA+EPG + CK GRYNL P + F ATPP
Sbjct: 66 VLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPPDD 125
Query: 62 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGL 121
G+L H A C+KLPDNV+ EEGA+ EPLSVG+HACRR + VL+ GAGPIG
Sbjct: 126 GNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGX 185
Query: 122 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTG 180
VT+L A+A GA ++V+ D+ RLS AKEIGAD ++++S + Q+IA +VE +G
Sbjct: 186 VTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGCK 242
Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 240
+V+ +C G ++ + AT +GG + LVG+G TVPL AA+REVD+ GVFRY NT
Sbjct: 243 PEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEXTTVPLLHAAIREVDIKGVFRYCNT 302
Query: 241 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 280
WP+ + L S ++VKPLVTHRF ++ EAFET +G
Sbjct: 303 WPVAISXLASKSVNVKPLVTHRFPL--EKALEAFETFKKG 340
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 211 bits (538), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 178/291 (61%), Gaps = 8/291 (2%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
V+GHE AG + V VK++ GDRVA+EP + C C+ C GRYN C + F +TPPV
Sbjct: 75 VLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVP 134
Query: 62 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGL 121
G L V HPA C K+ N+S E GAM EPLSV + +RA + VLI GAGPIGL
Sbjct: 135 GLLRRYVNHPAVWCHKI-GNMSYENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGL 193
Query: 122 VTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 181
+TML A+A GA +VI D+D+ RL AKEI + + L E +KI ++ G GI
Sbjct: 194 ITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERL-SAEESAKKIVESFG-GI 251
Query: 182 D--VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 239
+ V+ +C G+ +++ A+ A GGKV ++G+G +E+ +P A+VREVD+ +RY N
Sbjct: 252 EPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCN 311
Query: 240 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFN 289
TWP + L+ +G +D+ LVTHRF ++ +AFET++ T AIKV
Sbjct: 312 TWPRAIRLVENGLVDLTRLVTHRFPL--EDALKAFETASDPKTGAIKVQIQ 360
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 156/294 (53%), Gaps = 13/294 (4%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+ GHE AG + ++G V+ + GD V++E I C +C C+ G+Y++C K F
Sbjct: 62 QIXGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DT 120
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
G A V PA +K P ++ E + EPL V I ++ VLI GAGP+G
Sbjct: 121 DGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLG 179
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
L+ + A+A GA +++ + D+R +AK++GAD + ++ +D+ +EV I G G
Sbjct: 180 LLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNG 235
Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RY 237
+DV + +G K + L A G+V L+G+ ++T+ + + + + G+
Sbjct: 236 VDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHL 295
Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL 290
TW LL+SGK+++ P++TH++ GF + EEAFE R G KV+F L
Sbjct: 296 WETWYTVSRLLQSGKLNLDPIITHKYKGFDK--YEEAFEL-XRAGKTGKVVFXL 346
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 156/294 (53%), Gaps = 13/294 (4%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+ GHE AG + ++G V+ + GD V++E I C +C C+ G+Y++C K F
Sbjct: 63 QIXGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DT 121
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
G A V PA +K P ++ E + EPL V I ++ VLI GAGP+G
Sbjct: 122 DGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLG 180
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
L+ + A+A GA +++ + D+R +AK++GAD + ++ +D+ +EV I G G
Sbjct: 181 LLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNG 236
Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RY 237
+DV + +G K + L A G+V L+G+ ++T+ + + + + G+
Sbjct: 237 VDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHL 296
Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL 290
TW LL+SGK+++ P++TH++ GF + EEAFE R G KV+F L
Sbjct: 297 WETWYTVSRLLQSGKLNLDPIITHKYKGFDK--YEEAFEL-XRAGKTGKVVFXL 347
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 154/292 (52%), Gaps = 12/292 (4%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
++GHE AG + +VG V+ L GD +++E I C +C CK RY++C K F +
Sbjct: 63 QIMGHEVAGEVVEVGPGVEDLQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGV-DM 121
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
G A+ + PA +K P ++ E A+ EPL V I + LI GAGP+G
Sbjct: 122 DGVFAHYAIVPAKNAWKNPKDMPPEYAALQEPLGNAVDTVLAGPIAGRST-LITGAGPLG 180
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
L+ + A+A GA +++ + ++R +AK++GAD + V+ +D + V I G G
Sbjct: 181 LLGIAVAKASGAYPVIVSEPSEFRRKLAKKVGADYV--VNPFEEDPVKFVMDITD--GAG 236
Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RY 237
++V + +G K + L A GG+V L+G+ E+T+ + + ++V G+
Sbjct: 237 VEVFLEFSGAPKALEQGLKAVTPGGRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRHL 296
Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMF 288
TW L++SGK+++ P++TH++ GF + EEAFE G T V F
Sbjct: 297 WETWYTVSSLIQSGKLNLDPIITHKYKGFDK--FEEAFELMRAGKTGKVVFF 346
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 147/292 (50%), Gaps = 13/292 (4%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+V GHE +GV+E VG V+ GD V+LE I C C C+ G Y++C +
Sbjct: 59 LVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVD-R 117
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
G A VV PA+ + P ++ E A+ EP VH + +VLI GAGPIG
Sbjct: 118 DGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIG 177
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 180
L+ + RA GA I++ D + YRL+ A+ AD +V L++ + +E +++ G+G
Sbjct: 178 LMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVN---PLEE--DLLEVVRRVTGSG 231
Query: 181 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RY 237
++V + +G + L A GG+ ++G+ + L V R + G+ R
Sbjct: 232 VEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRL 291
Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 289
TW L+ SG++D+ PL+THR S+ EAF A G A+KV+ +
Sbjct: 292 WQTWMQGTALVYSGRVDLSPLLTHRLPLSR--YREAFGLLA-SGQAVKVILD 340
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 144/303 (47%), Gaps = 28/303 (9%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+ +GHE +G I+ VGS V L PGD VA P + C+ C C G Y+ C + F +
Sbjct: 55 ITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR- 113
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIG 120
G A +V F LP ++ +E+GA EP++VG+HA A NV+I+GAG IG
Sbjct: 114 DGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIG 173
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST----NLQDIAEEVEKIQKA 176
L+ + A A GA + +D+ +L++AK GA S +Q + E+ Q
Sbjct: 174 LLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLI 233
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV-----REVDV 231
+ T AG+ +T+ A+ ++ LVG H ++ LT A +E+ V
Sbjct: 234 LET--------AGVPQTVELAVEIAGPHAQLALVGTLHQDLH--LTSATFGKILRKELTV 283
Query: 232 VGVF-RYKNTWP-----LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 285
+G + Y + WP LL K+ ++PL+ HR F + +A AR K
Sbjct: 284 IGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSF--ESFAQAVRDIARNAMPGK 341
Query: 286 VMF 288
V+
Sbjct: 342 VLL 344
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 135/271 (49%), Gaps = 9/271 (3%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+ +GHE G++ + GS V+ + PG R+ +P ISC RC C+ GR NLC ++ +
Sbjct: 77 VTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIG---I 133
Query: 61 H--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGP 118
H G A V+ P F++P + GA CEPL+ +H + I + V I+G G
Sbjct: 134 HRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGV 193
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
IGL+T+ AR GA +++ + +A+E+GA V S D+ E + +
Sbjct: 194 IGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAG--DVVEAIAGPVGLVP 251
Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFR 236
G+DV +CAG+ +T+ + AGG V ++G+ V + P + RE+ V+G F
Sbjct: 252 GGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFI 311
Query: 237 YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ 267
+L+ +G I++ ++ R +
Sbjct: 312 NPFVHRRAADLVATGAIEIDRXISRRISLDE 342
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 119/271 (43%), Gaps = 16/271 (5%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
VIGHE GVI+ VG V++ G+RVA++P +SC C C G+ N+C + VH
Sbjct: 76 VIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLG---VH 132
Query: 62 --GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPI 119
G + V PA +K+P+ V+ + M EP ++ + VL+ GAGPI
Sbjct: 133 ADGGFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPI 192
Query: 120 GLVTMLAARA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL--QDIAEEVEKIQKA 176
GL + + + +++ D D RL AKE GAD + S + AE+
Sbjct: 193 GLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGESFAEK------- 245
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR 236
G + D A + A+ ++ L+G V +E+ +
Sbjct: 246 -GIKPTLIIDAACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRL 304
Query: 237 YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ 267
N +P+ ++ L G I + L+TH F F
Sbjct: 305 NANKFPVVIDWLSKGLIKPEKLITHTFDFQH 335
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 136/299 (45%), Gaps = 28/299 (9%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATP 58
++ GHE G++E+VG V L GDRV + P + +C CD+C G+ LC K A
Sbjct: 57 LIPGHEGVGIVEEVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQK-NAGY 114
Query: 59 PVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA 116
V G A AD K+PDN+S EE A C ++ A + P V I G
Sbjct: 115 SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGI 173
Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
G +G V + A+A G +V VD+ D +L +AKE+GAD +V + E+ K K
Sbjct: 174 GGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKE 226
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VF 235
G+ + A +A + GG LVG+ EM +P+ + + ++G +
Sbjct: 227 KVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIV 286
Query: 236 RYKNTWPLCLELLRSGK----IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
+ L+ GK I+V+PL +++ E F+ +G +V+ L
Sbjct: 287 GTRKDLQEALQFAAEGKVKTIIEVQPL---------EKINEVFDRMLKGQINGRVVLTL 336
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 135/299 (45%), Gaps = 28/299 (9%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATP 58
++ GHE G++E+VG V L GDRV + P + +C CD+C G+ LC K A
Sbjct: 57 LIPGHEGVGIVEEVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQK-NAGY 114
Query: 59 PVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA 116
V G A AD K+PDN+S EE A C ++ A + P V I G
Sbjct: 115 SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGI 173
Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
G G V + A+A G +V VD+ D +L +AKE+GAD +V + E+ K K
Sbjct: 174 GGFGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKE 226
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VF 235
G+ + A +A + GG LVG+ EM +P+ + + ++G +
Sbjct: 227 KVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIV 286
Query: 236 RYKNTWPLCLELLRSGK----IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 290
+ L+ GK I+V+PL +++ E F+ +G +V+ L
Sbjct: 287 GTRKDLQEALQFAAEGKVKTIIEVQPL---------EKINEVFDRMLKGQINGRVVLTL 336
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 139/312 (44%), Gaps = 39/312 (12%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+V+GHECAG++E VG V PGD+V C RC C NLC +++ F P +
Sbjct: 63 VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTI 122
Query: 61 HGSLANQ-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPL 93
L VV A+L ++ D +LE + C
Sbjct: 123 DQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFS 181
Query: 94 SVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
S A A + P + + G G +GL ++ + GA RI+ +D++ + AK +GA
Sbjct: 182 SGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA 241
Query: 154 DNIVKVSTNLQDIAEEVEK-IQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVG 211
+ + N +++ + V+ I + G+D S DCAG +T+ A+ T G G +VG
Sbjct: 242 TDCL----NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVG 297
Query: 212 MGHHEMTVPLTPAAV-REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQK 268
EMT+P + R ++ G ++ ++ P + ++ K D+ LVTH F +
Sbjct: 298 AKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF--E 355
Query: 269 EVEEAFETSARG 280
+ +A + G
Sbjct: 356 SINDAIDLMKEG 367
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 139/312 (44%), Gaps = 39/312 (12%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+V+GHECAG++E VG V PGD+V C RC C NLC +++ F P +
Sbjct: 63 VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTI 122
Query: 61 HGSLANQ-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPL 93
L VV A+L ++ D +LE + C
Sbjct: 123 DQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFS 181
Query: 94 SVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
S A A + P + + G G +GL ++ + GA RI+ +D++ + AK +GA
Sbjct: 182 SGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA 241
Query: 154 DNIVKVSTNLQDIAEEVEK-IQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVG 211
+ + N +++ + V+ I + G+D S DCAG +T+ A+ T G G +VG
Sbjct: 242 TDCL----NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVG 297
Query: 212 MGHHEMTVPLTPAAV-REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQK 268
EMT+P + R ++ G ++ ++ P + ++ K D+ LVTH F +
Sbjct: 298 AKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF--E 355
Query: 269 EVEEAFETSARG 280
+ +A + G
Sbjct: 356 SINDAIDLMKEG 367
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 123/263 (46%), Gaps = 14/263 (5%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
V+G + +GV++ VG V+ PGD V + PG+SC RC+ C G NLCP + H
Sbjct: 60 VLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRH 118
Query: 62 GSLANQVVHPADLCFKLPDNVSLEEGAMCEP--LSVGVHACRRANIGPETNVLIMGAGP- 118
G+ A VV P P N+S EE A L+ + + P +VL+M AG
Sbjct: 119 GTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSG 178
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
+ + + A+ FGA R++ + +L AK +GAD V + D +EV ++ G
Sbjct: 179 VSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH--PDWPKEVRRLTG--G 233
Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVG-VFR 236
G D D G + AT GG++ + G +E T+P R++ ++G
Sbjct: 234 KGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMA 292
Query: 237 YKNTWPLCLELLRSGKIDVKPLV 259
K+ L + GK+ KP+V
Sbjct: 293 SKSRLFPILRFVEEGKL--KPVV 313
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 141/312 (45%), Gaps = 37/312 (11%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
+++GHE AG++E +G V + PGD+V C +C C NLC ++ +P
Sbjct: 66 VIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPAS 125
Query: 59 -----------------PVH----GSLANQVVHPADLCF-KLPDNVSLEEGAMCE-PLSV 95
PV+ S +Q +D+ K+ D+ +LE + S
Sbjct: 126 DQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFST 185
Query: 96 GVHAC-RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 154
G A A + P + + G G +GL ++ +A GA RI+ +D++ + AK +GA
Sbjct: 186 GYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGAT 245
Query: 155 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCL---VG 211
+ + + I E + ++ K G+D + DCAG ++TM AL T AG C V
Sbjct: 246 DCLNPRDLHKPIQEVIIELTKG---GVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVA 302
Query: 212 MGHHEMTV-PLTPAAVREVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQK 268
G +TV P R ++ G ++ ++ P + ++ K ++ LVTH F +
Sbjct: 303 AGSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDK- 361
Query: 269 EVEEAFETSARG 280
+ EAF+ +G
Sbjct: 362 -ISEAFDLMNQG 372
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 142/325 (43%), Gaps = 49/325 (15%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
++ GHE AG++E +G V T+ PGD+V C +C CK NLC +K + P
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRG 120
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D +S+ + PL S
Sbjct: 121 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFS 176
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A + A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA
Sbjct: 177 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 236
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
V N QD + ++++ M G+D SF+ G TM AL + C A G +V
Sbjct: 237 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAAL-SCCQEAYGVSVIV 291
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
G+ + + P + + G F+ K++ P + + K + PL+TH F
Sbjct: 292 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 351
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
+++ E F+ R G +I+ +
Sbjct: 352 --EKINEGFDL-LRSGKSIRTILTF 373
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 142/325 (43%), Gaps = 49/325 (15%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
++ GHE AG++E +G V T+ PGD+V C +C CK NLC +K + P
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRG 120
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D +S+ + PL S
Sbjct: 121 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFS 176
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A + A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA
Sbjct: 177 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 236
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
V N QD + ++++ M G+D SF+ G TM AL + C A G +V
Sbjct: 237 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAAL-SCCQEAYGVSVIV 291
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
G+ + + P + + G F+ K++ P + + K + PL+TH F
Sbjct: 292 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 351
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
+++ E F+ R G +I+ +
Sbjct: 352 --EKINEGFDL-LRSGKSIRTILTF 373
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 141/325 (43%), Gaps = 48/325 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
++ GHE AG++E +G V T+ PGD+V C +C CK N C + + P
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D +S+ + PL S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A + A + + + G G +GL ++ +A GA RI+ VD++ R + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
V N QD + ++++ M G+D SF+ G TM TAL + C A G +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
G+ + + P + + G F+ K++ P + + K + PL+TH F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
+++ E F+ R G +I+ +
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 141/325 (43%), Gaps = 48/325 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
++ GHE AG++E +G V T+ PGD+V C +C CK N C + + P
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D +S+ + PL S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A + A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
V N QD + ++++ M G+D SF+ G TM TAL + C A G +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
G+ + + P + + G F+ K++ P + + K + PL+TH F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
+++ E F+ R G +I+ +
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 132/267 (49%), Gaps = 16/267 (5%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPPV 60
V+GHE G+++++G++V +L GDRV++ C C++C G C E+K A V
Sbjct: 57 VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKN-AGYSV 115
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-ACRRANIGPETNVLIMGAGPI 119
G +A + + AD K+PD + E + V + A + + + P +I GAG +
Sbjct: 116 DGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGL 175
Query: 120 G-LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI--AEEVEKIQKA 176
G L A FGA +++ VD++ +L++AK+IGAD I+ N D+ +E++KI
Sbjct: 176 GNLAIQYAKNVFGA-KVIAVDINQDKLNLAKKIGADVII----NSGDVNPVDEIKKITG- 229
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VF 235
G G+ + CA A+ + GK+ V + + EMT+ + V+V G +
Sbjct: 230 -GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLV 288
Query: 236 RYKNTWPLCLELLRSGKIDVKPLVTHR 262
+ + GK VKP+V R
Sbjct: 289 GTRLDLAEAFQFGAEGK--VKPIVATR 313
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 12/279 (4%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+ +GHE AG IE+VG EV GD VA+ P C +C+ G +LC ++
Sbjct: 64 VTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NY 122
Query: 61 HGSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGA-GP 118
G+ A V+ P +KL ++E + A R+A++ P ++++GA G
Sbjct: 123 DGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGG 182
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
+G + + A+A I+ VDV + L AK GAD ++ S+ QD E+ +I + G
Sbjct: 183 LGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASS--QDPVSEIRRITQ--G 238
Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRY 237
G D D KT+S GK +VG+ ++ + EV +G +
Sbjct: 239 KGADAVIDLNNSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGN 298
Query: 238 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 276
++ + + L +GK VKP+VT +E EA +
Sbjct: 299 QSDFLGIMSLAEAGK--VKPMVTKTMKL--EEANEAIDN 333
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 132/267 (49%), Gaps = 16/267 (5%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPPV 60
V+GHE G+++++G++V +L GDRV++ C C++C G C E+K A V
Sbjct: 57 VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKN-AGYSV 115
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-ACRRANIGPETNVLIMGAGPI 119
G +A + + AD K+PD + E + V + A + + + P +I GAG +
Sbjct: 116 DGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGL 175
Query: 120 G-LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI--AEEVEKIQKA 176
G L A FGA +++ VD++ +L++AK+IGAD V+ N D+ +E++KI
Sbjct: 176 GNLAIQYAKNVFGA-KVIAVDINQDKLNLAKKIGAD----VTINSGDVNPVDEIKKITG- 229
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VF 235
G G+ + CA A+ + GK+ V + + EMT+ + V+V G +
Sbjct: 230 -GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLV 288
Query: 236 RYKNTWPLCLELLRSGKIDVKPLVTHR 262
+ + GK VKP+V R
Sbjct: 289 GTRLDLAEAFQFGAEGK--VKPIVATR 313
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 141/325 (43%), Gaps = 48/325 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
++ GHE AG++E +G V T+ PGD+V C +C CK N C + + P
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D +S+ + PL S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A + A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
V N QD + ++++ M G+D SF+ G TM TAL + C A G +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
G+ + + P + + G F+ K++ P + + K + PL+TH F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
+++ E F+ R G +I+ +
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 141/325 (43%), Gaps = 48/325 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
++ GHE AG++E +G V T+ PGD+V C +C CK N C + + P
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D +S+ + PL S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A + A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
V N QD + ++++ M G+D SF+ G TM TAL + C A G +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
G+ + + P + + G F+ K++ P + + K + PL+TH F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
+++ E F+ R G +I+ +
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 141/325 (43%), Gaps = 48/325 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
++ GHE AG++E +G V T+ PGD+V C +C CK N C + + P
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D +S+ + PL S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A + A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
V N QD + ++++ M G+D SF+ G TM TAL + C A G +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTPAAVREVD-----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
G+ + + P + + G F+ K++ P + + K + PL+TH F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
+++ E F+ R G +I+ +
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 140/325 (43%), Gaps = 48/325 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
++ GHE AG++E +G V T+ PGD+V C +C CK N C + + P
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D +S+ + PL S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A + A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
V N QD + ++++ M G+D SF+ G TM TAL + C A G +
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIT 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
G+ + + P + + G F+ K++ P + + K + PL+TH F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
+++ E F+ R G +I+ +
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 140/325 (43%), Gaps = 48/325 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
++ GHE AG++E +G V T+ PGD+V C +C CK N C + + P
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D +S+ + PL S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A + A + + + G G GL ++ +A GA RI+ VD++ + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
V N QD + ++++ M G+D SF+ G TM TAL + C A G +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
G+ + + P + + G F+ K++ P + + K + PL+TH F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
+++ E F+ R G +I+ +
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 140/325 (43%), Gaps = 48/325 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
++ GHE AG++E +G V T+ PGD+V C +C CK N C + + P
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D +S+ + PL S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A + A + + + G G GL ++ +A GA RI+ VD++ + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
V N QD + ++++ M G+D SF+ G TM TAL + C A G +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
G+ + + P + + G F+ K++ P + + K + PL+TH F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
+++ E F+ R G +I+ +
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 140/325 (43%), Gaps = 48/325 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
++ GHE AG++E +G V T+ PGD+V C +C CK N C + + P
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D +S+ + PL S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A + A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
V N QD + ++++ M G+D SF+ G TM TAL + C A G +
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIS 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
G+ + + P + + G F+ K++ P + + K + PL+TH F
Sbjct: 293 GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
+++ E F+ R G +I+ +
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 140/325 (43%), Gaps = 48/325 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
++ GHE AG++E +G V T+ PGD+V C +C CK N C + + P
Sbjct: 63 VIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRG 121
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D +S+ + PL S
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFS 177
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A + A + + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA
Sbjct: 178 TGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATC--AGGKVCLV 210
V N QD + ++++ M G+D SF+ G TM TAL + C A G +V
Sbjct: 238 TECV----NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL-SCCQEAYGVSVIV 292
Query: 211 GMGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 265
+ + + P + + G F+ K++ P + + K + PL+TH F
Sbjct: 293 AVTPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF 352
Query: 266 SQKEVEEAFETSARGGTAIKVMFNL 290
+++ E F+ R G +I+ +
Sbjct: 353 --EKINEGFDL-LRSGESIRTILTF 374
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
M++GHE G + +VGSEVK PGDRV + WR + G + M KF
Sbjct: 55 MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114
Query: 57 TPP-VHGSLANQVVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLI 113
V G + V+ AD+ LP + LE M + ++ G H A+I V +
Sbjct: 115 VKDGVFGEFFH--VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
+G GP+GL+ + A+ GA RI+ V + AK GA +IV N +D E + +
Sbjct: 173 LGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIM 228
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
G G+D + G M+TA+ GG + V GM H
Sbjct: 229 NLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLDVPRLEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
+ L P G R + ++L+ ++D LVTH F GF +E+AF
Sbjct: 289 TIKGGLCPG--------GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 142/319 (44%), Gaps = 36/319 (11%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--------- 51
+++GHE AG++E VG V T+ PGD+V C +C CK N C +
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGT 122
Query: 52 -----MKFFAT-PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGV-H 98
+F + P+H + + V + K+ LE+ + S G
Sbjct: 123 LQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGS 182
Query: 99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
A + A + P + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA +
Sbjct: 183 AVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECI- 241
Query: 159 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHE 216
N QD + ++++ K M G+D SF+ G L+ M++ L A G +VG+
Sbjct: 242 ---NPQDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDS 298
Query: 217 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 271
+ + P + + G F+ K + P + + K + L+T+ F +++
Sbjct: 299 QNLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPF--EKIN 356
Query: 272 EAFETSARGGTAIKVMFNL 290
E F+ R G +I+ +
Sbjct: 357 EGFDL-LRSGKSIRTVLTF 374
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 123/297 (41%), Gaps = 32/297 (10%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPP 59
+ +GHE G + ++G V GD VA+ C C C GR N C TPP
Sbjct: 58 LTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPP 117
Query: 60 VHGSLANQ----VVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRAN--IGPETNVLI 113
GS + +V A + D + + + HA R +GP + ++
Sbjct: 118 GLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVV 177
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
+G G +G V + RA A R++ VD+DD RL++A+E+GAD VK D E+
Sbjct: 178 IGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTG- 236
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM---GHHEMTVPLTPAAVREVD 230
G G FD G T+ TA G + +VG+ H ++ + P V
Sbjct: 237 ----GQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVT 292
Query: 231 VVGVFRYKNTWPLCLE---LLRSGKIDVKPLVTHRFGFSQKEVEEAF----ETSARG 280
Y T +E L R+G++D+ H F+ E A+ E S RG
Sbjct: 293 -----PYWGTRSELMEVVALARAGRLDI-----HTETFTLDEGPAAYRRLREGSIRG 339
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
M++GHE G + +VGSEVK PGDRV + WR + G + M KF
Sbjct: 55 MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114
Query: 57 TPP-VHGSLANQVVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLI 113
V G + V+ AD+ LP + LE M + ++ G H A+I V +
Sbjct: 115 VKDGVFGEFFH--VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
+G GP+GL+ + A+ GA RI+ V + AK GA +IV N +D E + +
Sbjct: 173 LGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIM 228
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
G G+D + G M+TA+ GG + V GM H
Sbjct: 229 NLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
+ L P G R + ++L+ ++D LVTH F GF +E+AF
Sbjct: 289 TIKGGLCPG--------GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATP 58
+ GHE G + VGS VK + GDRV + P + +C C HC GG LC E +
Sbjct: 82 FIPGHEGVGFVSAVGSGVKHVKEGDRVGI-PWLYTACGHCRHCLGGWETLCEE-QLNTGY 139
Query: 59 PVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA 116
V+G A VV + LP N+ E A +C ++V + + P V+I G
Sbjct: 140 SVNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTV-YKGLKVTDTKPGDWVVISGI 198
Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
G +G + + ARA G + VD+DD +L +A+ +GA V+ N + +A+ I+K
Sbjct: 199 GGLGHMAVQYARAMGL-NVAAVDIDDRKLDLARRLGA----TVTVNAKTVADPAAYIRKE 253
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 212
G A K ALG GG V L G+
Sbjct: 254 TDGGAQGVLVTAVSPKAFEQALGMVARGGTVSLNGL 289
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 127/305 (41%), Gaps = 38/305 (12%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF------- 54
++GHE AG++E VG V + GD V C C CK G+ NLC +++
Sbjct: 65 ILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIM 124
Query: 55 -------FAT--PPVHGSLANQ------VVHPADLCFKLPDNVSLEEGAMCE---PLSVG 96
F+ P++ + VVH + K+ L++ + P +G
Sbjct: 125 MNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVA-KIDPTAPLDKVCLLGCGVPTGLG 183
Query: 97 VHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNI 156
A + P +NV I G G +GL A+ GA RI+ +D+D + AK+ G +
Sbjct: 184 A-VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEF 242
Query: 157 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM--- 212
V + + I E + + G+D SF+C G M AL G G +VG+
Sbjct: 243 VNPKDHDKPIQEVIVDLTDG---GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 299
Query: 213 GHHEMTVP--LTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEV 270
G T P L V + G F+ + P +E + +I V +TH E+
Sbjct: 300 GQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLG--EI 357
Query: 271 EEAFE 275
+AF+
Sbjct: 358 NKAFD 362
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 135/304 (44%), Gaps = 35/304 (11%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC-------PE-- 51
+++GHE AG++E VG V T+ PGD+V C +C CK N C P+
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGT 122
Query: 52 -----MKFFAT-PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGV-H 98
+F P+H + + V + K+ LE+ + S G
Sbjct: 123 LQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGS 182
Query: 99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
A A + P + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA +
Sbjct: 183 AVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECI- 241
Query: 159 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVGMGHHE 216
N QD + ++++ K M G+D SF+ G L+ M++ L A G +VG+
Sbjct: 242 ---NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDS 298
Query: 217 MTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 271
+ + P + ++G F+ K P + + K + L+TH F +++
Sbjct: 299 QNLSMNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPF--EKIN 356
Query: 272 EAFE 275
E F+
Sbjct: 357 EGFD 360
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 135/321 (42%), Gaps = 45/321 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
+++GHE AG++E VG V T+ PGD+V C +C CK N C + P
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDL-GNPRG 121
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D ++ + PL S
Sbjct: 122 TLQDGTRRFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFS 177
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A A + P + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA
Sbjct: 178 TGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVG 211
+ N QD + ++++ K M G+D SF+ G L+ M++ L A G +VG
Sbjct: 238 TECI----NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVG 293
Query: 212 MGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFS 266
+ + + P + V G F+ K P + + K + L+TH F
Sbjct: 294 VPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF- 352
Query: 267 QKEVEEAFETSARGGTAIKVM 287
+++ E F+ G + V+
Sbjct: 353 -EKINEGFDLLHSGKSICTVL 372
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 131/309 (42%), Gaps = 45/309 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
+++GHE AG++E VG V T+ PGD+V C +C CK N C + P
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDL-GNPRG 121
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D ++ + PL S
Sbjct: 122 TLQDGTRRFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFS 177
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A A + P + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA
Sbjct: 178 TGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVG 211
+ N QD + ++++ K M G+D SF+ G L+ M++ L A G +VG
Sbjct: 238 TECI----NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVG 293
Query: 212 MGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFS 266
+ + + P + V G F+ K P + + K + L+TH F
Sbjct: 294 VPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF- 352
Query: 267 QKEVEEAFE 275
+++ E F+
Sbjct: 353 -EKINEGFD 360
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 131/309 (42%), Gaps = 45/309 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
+++GHE AG++E VG V T+ PGD+V C +C CK N C + P
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDL-GNPRG 121
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D ++ + PL S
Sbjct: 122 TLQDGTRRFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFS 177
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A A + P + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA
Sbjct: 178 TGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVG 211
+ N QD + ++++ K M G+D SF+ G L+ M++ L A G +VG
Sbjct: 238 TECI----NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVG 293
Query: 212 MGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFS 266
+ + + P + V G F+ K P + + K + L+TH F
Sbjct: 294 VPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF- 352
Query: 267 QKEVEEAFE 275
+++ E F+
Sbjct: 353 -EKINEGFD 360
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 131/309 (42%), Gaps = 45/309 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-- 58
+++GHE AG++E VG V T+ PGD+V C +C CK N C + P
Sbjct: 63 VILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDL-GNPRG 121
Query: 59 --------------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------S 94
P+H L + + D ++ + PL S
Sbjct: 122 TLQDGTRRFTCRGKPIHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFS 177
Query: 95 VGV-HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGA 153
G A A + P + + G G +GL ++ +A GA RI+ VD++ + + AKE+GA
Sbjct: 178 TGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGA 237
Query: 154 DNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAG-LNKTMSTALGATCAGGKVCLVG 211
+ N QD + ++++ K M G+D SF+ G L+ M++ L A G +VG
Sbjct: 238 TECI----NPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVG 293
Query: 212 MGHHEMTVPLTP-----AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFS 266
+ + + P + V G F+ K P + + K + L+TH F
Sbjct: 294 VPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF- 352
Query: 267 QKEVEEAFE 275
+++ E F+
Sbjct: 353 -EKINEGFD 360
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 126/300 (42%), Gaps = 46/300 (15%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
M++GHE G + +VGSEVK PGDRV + WR + G + M KF
Sbjct: 55 MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114
Query: 57 TPP-VHGSLANQVVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLI 113
V G + V+ AD+ LP + LE M + ++ G H ANI V +
Sbjct: 115 VKDGVFGEFFH--VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
+G GP+GL+++ A GA RI V + +A E GA +I+ DI E++ +
Sbjct: 173 IGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQI--L 228
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKV------------------CLVGMGHH 215
+ G G+D G T + A+ G + VGMGH
Sbjct: 229 KATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
+ L P G R + ++L+ ++D LVTH F GF +E+AF
Sbjct: 289 HIHGGLCPG--------GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 133/319 (41%), Gaps = 37/319 (11%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK-------- 53
V+GHE AG++E VG V + PGD V C C CK G+ NLC +++
Sbjct: 83 VLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVM 142
Query: 54 ---------FFATPPVH---GSLANQVVHPADLCFKLPDNVS-LEEGAMCE---PLSVGV 97
P H S +Q D+ D V+ LE+ + P +G
Sbjct: 143 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGA 202
Query: 98 HACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157
A + P + V + G G +GL A+A GA RI+ +D+D + AK G +
Sbjct: 203 -VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFI 261
Query: 158 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGM---G 213
+ Q I + + + G+D SF+C G M +AL G G +VG+ G
Sbjct: 262 NPKEHEQPIQQVIVDLTDG---GVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASG 318
Query: 214 HHEMTVP--LTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 271
T P L V + G F+ ++ P ++ +I V +TH + ++
Sbjct: 319 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLA--DIN 376
Query: 272 EAFETSARGGTAIKVMFNL 290
+AF+ G ++V+ ++
Sbjct: 377 KAFDL-MHDGDCLRVVLDM 394
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
M++GHE G + +VGSEVK PGDRV + WR + G M KF
Sbjct: 55 MILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSN 114
Query: 57 TPP-VHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIGPETNVLI 113
V G + V+ AD+ LP ++ LE M + ++ G H A+I V +
Sbjct: 115 FKDGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGATVAV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
+G GP+GL+ + A+ GA RI+ V + AK GA +IV N +D E + +
Sbjct: 173 LGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIM 228
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
G G+D + G M+TA+ GG + V GM H
Sbjct: 229 NLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
+ L P G R + + +++ ++D+ LVTH + GF +EEA
Sbjct: 289 TIKGGLCPG--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 44/241 (18%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM--------- 52
V+GHE +G+IE +G V L GD V L G C +C C G C E
Sbjct: 62 VLGHEGSGIIEAIGPNVTELQVGDHVVLSYGY-CGKCTQCNTGNPAYCSEFFGRNFSGAD 120
Query: 53 -----------------KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV 95
FFA S A + + K+ +V +E + PL
Sbjct: 121 SEGNHALCTHDQGVVNDHFFA----QSSFATYALSRENNTVKVTKDVPIE---LLGPLGC 173
Query: 96 GVH----ACRRA-NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKE 150
G+ AC A + P ++ + GAG +GL +LAA+ GA I+ VD+ + RL +AK+
Sbjct: 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ 233
Query: 151 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 210
+GA +++ T + V I++ G++ + + G + + + A GK+ +V
Sbjct: 234 LGATHVINSKTQ-----DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVV 288
Query: 211 G 211
G
Sbjct: 289 G 289
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
M++GHE G + +VGSEVK PGDRV + WR + G + M KF
Sbjct: 55 MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114
Query: 57 TPP-VHGSLANQVVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLI 113
V G + V+ AD+ LP + LE M + ++ G H A+I ++V++
Sbjct: 115 VKDGVFGEFFH--VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
+G G +GL+ + A+ GA RI+ V + AK GA +I+ I ++V K+
Sbjct: 173 IGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKL 230
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
G G+D G ++T+S A+ GG + + GM H
Sbjct: 231 TN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
+ L P G R + ++L+ ++D LVTH F GF +E+AF
Sbjct: 289 TIKGGLCPG--------GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 14/237 (5%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATP 58
+ GHE G + VGS V + GDRV + P + +C C+HC G LC E +
Sbjct: 63 FIPGHEGVGYVAAVGSGVTRVKEGDRVGI-PWLYTACGCCEHCLTGWETLC-ESQQNTGY 120
Query: 59 PVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGA 116
V+G A V+ + LP NV E A +C ++V ++ N P V I G
Sbjct: 121 SVNGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGI 179
Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
G +G V + ARA G + +D+DD +L +A+++GA V + VE IQ+
Sbjct: 180 GGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNARQE-----DPVEAIQRD 233
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 233
+G G A N A+G GG + LVG+ + P+ ++ + + G
Sbjct: 234 IG-GAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAG 289
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
M++GHE G + +VGSEVK PGDRV + WR + G + M KF
Sbjct: 55 MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114
Query: 57 TPP-VHGSLANQVVHPADLCF-KLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLI 113
V G + V+ AD+ LP + LE M + ++ G H A+I ++V++
Sbjct: 115 VKDGVFGEFFH--VNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
+G G +GL+ + A+ GA RI+ V + AK GA +I+ I ++V K+
Sbjct: 173 IGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKL 230
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
G G+D G ++T+S A+ GG + + GM H
Sbjct: 231 TN--GKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
+ L P G R + ++L+ ++D LVTH F GF +E+AF
Sbjct: 289 TIKGGLCPG--------GRLRMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 125/298 (41%), Gaps = 42/298 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR-YNLCPEMKFFATPP 59
M++GHE G I KVGS VK L GD+V + W + + G + + +
Sbjct: 55 MILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSN 114
Query: 60 VHGSLANQVVH----PADLCFKLPDNVSLEEGAMCEPL-SVGVHACRRANIGPETNVLIM 114
+ ++V H A+L LP ++ E+ M + + G H ANI V ++
Sbjct: 115 FKDGVFSEVFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI 173
Query: 115 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 174
G GP+GL+++ A GA RI V + +A E GA +I+ DI E++ ++
Sbjct: 174 GIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQI--LK 229
Query: 175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKV------------------CLVGMGHHE 216
G G+D G T + A+ G + VGMGH
Sbjct: 230 ATDGKGVDKVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKH 289
Query: 217 MTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 274
+ LTP G R + L+ +GK+D L+THRF +K VE+A
Sbjct: 290 IHGGLTPG--------GRVRMEK----LASLISTGKLDTSKLITHRFEGLEK-VEDAL 334
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 109/236 (46%), Gaps = 12/236 (5%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPP 59
+ GHE G + VGS V + GDRV + S C C+HC G LC E +
Sbjct: 59 FIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLC-EKQQNTGYS 117
Query: 60 VHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGAG 117
V+G VV + LPD V E A +C ++V + + P V+I G G
Sbjct: 118 VNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTV-YKGLKVTDTRPGQWVVISGIG 176
Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
+G V + ARA G R+ VD+DD +L++A+ +GA+ V+ N +D + +QK +
Sbjct: 177 GLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAE----VAVNARD-TDPAAWLQKEI 230
Query: 178 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 233
G G A K S A+G GG + L G+ + P+ ++ + + G
Sbjct: 231 G-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRG 285
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 125/298 (41%), Gaps = 42/298 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR-YNLCPEMKFFATPP 59
M++GHE G I KVGS VK L GD+V + W + + G + + +
Sbjct: 55 MILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSN 114
Query: 60 VHGSLANQVVH----PADLCFKLPDNVSLEEGAMCEPL-SVGVHACRRANIGPETNVLIM 114
+ ++V H A+L LP ++ E+ M + + G H ANI V ++
Sbjct: 115 FKDGVFSEVFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI 173
Query: 115 GAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 174
G GP+GL+++ A GA RI V + +A E GA +I+ DI E++ ++
Sbjct: 174 GIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQI--LK 229
Query: 175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKV------------------CLVGMGHHE 216
G G+D G T + A+ G + VGMGH
Sbjct: 230 ATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRSEWGVGMGHKH 289
Query: 217 MTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 274
+ LTP G R + L+ +GK+D L+THRF +K VE+A
Sbjct: 290 IHGGLTPG--------GRVRMEK----LASLISTGKLDTSKLITHRFEGLEK-VEDAL 334
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 12/279 (4%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+ +GHE AG IE+VG EV GD VA+ P C +C+ G +LC ++
Sbjct: 64 VTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NF 122
Query: 61 HGSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGP 118
G+ A V+ P +KL ++E + A R+A++ P +T +++ G
Sbjct: 123 DGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGG 182
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
+G + + A+A I+ VDV + + AK GAD ++ S +QD E+ +I ++
Sbjct: 183 LGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES-- 238
Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK 238
G+D D KT+S A GK +VG+ ++ + E+ VG
Sbjct: 239 KGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGN 298
Query: 239 NTWPL-CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 276
+ L + L +GK VKP++T +E EA +
Sbjct: 299 QSDFLGIMRLAEAGK--VKPMITKTMKL--EEANEAIDN 333
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 12/279 (4%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+ +GHE AG IE+VG EV GD VA+ P C +C+ G +LC ++
Sbjct: 64 VTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NF 122
Query: 61 HGSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGP 118
G+ A V+ P +KL ++E + A R+A++ P +T +++ G
Sbjct: 123 DGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGG 182
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
+G + + A+A I+ VDV + + AK GAD ++ S +QD E+ +I ++
Sbjct: 183 LGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES-- 238
Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK 238
G+D D KT+S A GK +VG+ ++ + E+ VG
Sbjct: 239 KGVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGN 298
Query: 239 NTWPL-CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 276
+ L + L +GK VKP++T +E EA +
Sbjct: 299 QSDFLGIMRLAEAGK--VKPMITKTMKL--EEANEAIDN 333
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 12/279 (4%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+ +GHE AG IE+VG EV GD VA+ P C +C+ G +LC ++
Sbjct: 64 VTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGI-NF 122
Query: 61 HGSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGP 118
G+ A V+ P +KL ++E + A R+A++ P +T +++ G
Sbjct: 123 DGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGG 182
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
+G + + A+A I+ VDV + + AK GAD ++ S +QD E+ +I ++
Sbjct: 183 LGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES-- 238
Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK 238
G+D D KT+S A GK +VG+ ++ + E+ VG
Sbjct: 239 KGVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGN 298
Query: 239 NTWPL-CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 276
+ L + L +GK VKP++T +E EA +
Sbjct: 299 QSDFLGIMRLAEAGK--VKPMITKTMKL--EEANEAIDN 333
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 34/264 (12%)
Query: 1 MVIGHECAGVIEKVGSEVKTL-----VPGDRVALEPGISCWRCDHCKGGRY-NLCPEMKF 54
+++GHE AG + +V E + L PGD + GI+C C CK + LCP K
Sbjct: 73 IILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV 132
Query: 55 FAT-------PPVHGSLANQVV-HPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 106
+ P + G ++ +V P K+ + L+ AM + G A +
Sbjct: 133 YGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMA--MCSGATAYHAFDEY 190
Query: 107 PET----NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN 162
PE+ V+I GAGP+GL ++ AR+ GA ++++ RL +A+EIGAD ++ N
Sbjct: 191 PESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD----LTLN 246
Query: 163 LQDIAEEVEKIQKAM-----GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM 217
++ + VE+ +KA+ G G D + G ++ + GG + G+ +
Sbjct: 247 RRETS--VEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQD 304
Query: 218 TVPLTPAAVREVDVVGVFRYKNTW 241
VP V E V+ +K W
Sbjct: 305 PVPFK---VYEWLVLKNATFKGIW 325
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
M++GHE G + +VGSEVK PGDRV + WR + G M KF
Sbjct: 55 MILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSN 114
Query: 57 TPP-VHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIGPETNVLI 113
V G + V+ AD+ LP ++ LE M + ++ G H A+I ++V++
Sbjct: 115 FKDGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
+G G +GL+ + A+ GA RI+ V + AK GA +I+ I ++V K+
Sbjct: 173 IGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKL 230
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
G G+D G ++T+S A+ GG + + GM H
Sbjct: 231 TN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
+ L P G R + + +++ ++D+ LVTH + GF +EEA
Sbjct: 289 TIKGGLCPG--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 46/300 (15%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGG----RYNLCPEMKFFA 56
M++GHE G + +VGSEVK PGDRV + WR + G + KF
Sbjct: 55 MILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSN 114
Query: 57 TPP-VHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIGPETNVLI 113
V G + V+ AD+ LP ++ LE M + ++ G H A+I ++V++
Sbjct: 115 FKDGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
+G G +GL+ + A+ GA RI+ V + AK GA +I+ I ++V K+
Sbjct: 173 IGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKL 230
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
G G+D G ++T+S A+ GG + + GM H
Sbjct: 231 TN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
+ L P G R + + +++ ++D+ LVTH + GF +EEA
Sbjct: 289 TIKGGLCPG--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 120/313 (38%), Gaps = 43/313 (13%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+++GHE AG++E VG V L GD V C C C + NLC +++ +
Sbjct: 63 VILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 122
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH----- 98
++ + E + +SV G+
Sbjct: 123 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182
Query: 99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
A A + P + + G G +GL ++ + GA RI+ VD++ + + AKE GA +
Sbjct: 183 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI- 241
Query: 159 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM 217
N QD ++ ++++ M G+D SF+C G K M AL A G +
Sbjct: 242 ---NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGV 294
Query: 218 TVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQ 267
A R +V +K T W P + S KI V VTH F
Sbjct: 295 AASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD- 353
Query: 268 KEVEEAFETSARG 280
E+ +AFE G
Sbjct: 354 -EINKAFELMHSG 365
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 120/313 (38%), Gaps = 43/313 (13%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+++GHE AG++E VG V L GD V C C C + NLC +++ +
Sbjct: 62 VILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 121
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH----- 98
++ + E + +SV G+
Sbjct: 122 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 181
Query: 99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
A A + P + + G G +GL ++ + GA RI+ VD++ + + AKE GA +
Sbjct: 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI- 240
Query: 159 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM 217
N QD ++ ++++ M G+D SF+C G K M AL A G +
Sbjct: 241 ---NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGV 293
Query: 218 TVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQ 267
A R +V +K T W P + S KI V VTH F
Sbjct: 294 AASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD- 352
Query: 268 KEVEEAFETSARG 280
E+ +AFE G
Sbjct: 353 -EINKAFELMHSG 364
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 120/313 (38%), Gaps = 43/313 (13%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+++GHE AG++E VG V L GD V C C C + NLC +++ +
Sbjct: 63 VILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 122
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH----- 98
++ + E + +SV G+
Sbjct: 123 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182
Query: 99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
A A + P + + G G +GL ++ + GA RI+ VD++ + + AKE GA +
Sbjct: 183 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI- 241
Query: 159 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM 217
N QD ++ ++++ M G+D SF+C G K M AL A G +
Sbjct: 242 ---NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGV 294
Query: 218 TVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQ 267
A R +V +K T W P + S KI V VTH F
Sbjct: 295 AASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD- 353
Query: 268 KEVEEAFETSARG 280
E+ +AFE G
Sbjct: 354 -EINKAFELMHSG 365
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 118/290 (40%), Gaps = 30/290 (10%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+V+GHE AG++E VG V PG++V C C C+ + N C + +P V
Sbjct: 64 VVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDV 123
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH----- 98
+ + + + + ++V GV
Sbjct: 124 MSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGA 183
Query: 99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
A A + P + + G G +GL ++ + GA RI+ VD++ + AK GA + V
Sbjct: 184 AVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVN 243
Query: 159 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMG--HH 215
+ + + I++ + K+ G+D S +C G M AL + G G LVG H
Sbjct: 244 PNDHSEPISQVLSKMTNG---GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHD 300
Query: 216 EMTVPLTPAAVR--EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF 263
T P+ A R + + G F+ K+ P ++ K+ + +THR
Sbjct: 301 VATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRM 350
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 12/217 (5%)
Query: 3 IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 62
+GHE G IE+V V+ L GD V L P ++ C C+ G C ++F + G
Sbjct: 77 LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDG 135
Query: 63 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLS-VGVHACRRAN-----IGPETNVLIMGA 116
A + KLP ++S E+ PL+ G+ A R + P V I+G
Sbjct: 136 GFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV 195
Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
G +G + + + ++ +DV + +L +A+ +GAD++V +D ++V ++ +
Sbjct: 196 GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR---RDPVKQVMELTR- 251
Query: 177 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 213
G G++V+ D G T+ G++ +VG G
Sbjct: 252 -GRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG 287
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 129/300 (43%), Gaps = 46/300 (15%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFA 56
M++GHE G + +VGSEVK PGDRV + WR + G M KF
Sbjct: 55 MILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSN 114
Query: 57 TPP-VHGSLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIGPETNVLI 113
V G + V+ AD+ LP ++ LE M + ++ G H A+I ++V++
Sbjct: 115 FKDGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVV 172
Query: 114 MGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 173
+G G +GL+ + A+ GA RI+ V + AK GA +I+ I ++V K+
Sbjct: 173 IGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIEDQVMKL 230
Query: 174 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV------------------GMGHH 215
G G+D G ++T+S A+ GG + + GM H
Sbjct: 231 TN--GKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHK 288
Query: 216 EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 274
+ L P G R + +++ ++D+ LVTH + GF +EEA
Sbjct: 289 TIKGGLCPG--------GRLRAER----LRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 15/278 (5%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+ +GHE AG IE+VG EV GD VA+ P C +C+ G +LC ++
Sbjct: 64 VTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NF 122
Query: 61 HGSLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGP-ETNVLIMGAGP 118
G+ A V+ P +KL ++E + A R+A++ P +T +++ G
Sbjct: 123 DGAYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGG 182
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 178
+G + A+A I+ VDV + + AK GAD ++ S +QD E+ +I ++
Sbjct: 183 LGTXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES-- 238
Query: 179 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK 238
G+D D KT+S A GK VG+ ++ + E+ VG
Sbjct: 239 KGVDAVIDLNNSEKTLSVYPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGN 298
Query: 239 NTWPLCL-ELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 275
+ L + L +GK VKP +T ++EEA E
Sbjct: 299 QSDFLGIXRLAEAGK--VKPXIT-----KTXKLEEANE 329
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 119/313 (38%), Gaps = 43/313 (13%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+++GH AG++E VG V L GD V C C C + NLC +++ +
Sbjct: 62 VILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 121
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----------------GVH----- 98
++ + E + +SV G+
Sbjct: 122 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 181
Query: 99 ACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 158
A A + P + + G G +GL ++ + GA RI+ VD++ + + AKE GA +
Sbjct: 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI- 240
Query: 159 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM 217
N QD ++ ++++ M G+D SF+C G K M AL A G +
Sbjct: 241 ---NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGV 293
Query: 218 TVPLTPAAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQ 267
A R +V +K T W P + S KI V VTH F
Sbjct: 294 AASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD- 352
Query: 268 KEVEEAFETSARG 280
E+ +AFE G
Sbjct: 353 -EINKAFELMHSG 364
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 16/172 (9%)
Query: 1 MVIGHECAGVIEKVGSEV------KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 54
+ +GHE +GV+ + G E K G+ V E + C C C G N C +
Sbjct: 93 VTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNE 152
Query: 55 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEG-------AMCEPLSVGVHAC--RRANI 105
V G+ A V A + L + + EG ++ EP SV +A R I
Sbjct: 153 LGFN-VDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGI 211
Query: 106 GPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIV 157
P NV+I+G GPIGL + + GA ++++ + + R ++AKE+GAD+++
Sbjct: 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVI 263
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 129/316 (40%), Gaps = 35/316 (11%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+++GHE GV+E +G+ V + PGD+V C C CK N C + A +
Sbjct: 64 VILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGL 123
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-------VHAC------------- 100
+ ++ + L + E + ++V + +C
Sbjct: 124 MADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAA 183
Query: 101 -RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159
A + P + + G G +G ++ +A GA RI+ V + A E+GA +
Sbjct: 184 VNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL-- 241
Query: 160 STNLQDIAEEV-EKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMG---H 214
N +D + + E I + G+D + +CAG +TM AL +T C G ++G+
Sbjct: 242 --NPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNE 299
Query: 215 HEMTVPLTPAAVREV--DVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEE 272
PL R + V G F+ + L + ++ KI+V LV+ + Q + +
Sbjct: 300 RLPLDPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKK-KINVNFLVSTKLTLDQ--INK 356
Query: 273 AFETSARGGTAIKVMF 288
AFE + G +M
Sbjct: 357 AFELLSSGQGVRSIMI 372
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 124/303 (40%), Gaps = 34/303 (11%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--- 57
+++GHE G++E +G V T+ PGD+V C C+ C+ NLC
Sbjct: 63 VIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVL 122
Query: 58 -----------PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC 100
PVH + V K+ D E+ + S G A
Sbjct: 123 ADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAA 182
Query: 101 -RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159
+ + P + ++ G G +GL ++ ++ GA RI+ +D++ + A +GA +
Sbjct: 183 VKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISP 242
Query: 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEM 217
+ + I+E + ++ G + +F+ G +TM AL A+C G +VG+
Sbjct: 243 KDSTKPISEVLSEMT---GNNVGYTFEVIGHLETMIDAL-ASCHMNYGTSVVVGVPPSAK 298
Query: 218 TVPLTPAAVREVD-----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEE 272
+ P + V G + ++ P + + K D+ L+TH F K++ E
Sbjct: 299 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPF--KKISE 356
Query: 273 AFE 275
FE
Sbjct: 357 GFE 359
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 124/303 (40%), Gaps = 34/303 (11%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--- 57
+++GHE G++E +G V T+ PGD+V C C+ C+ NLC
Sbjct: 63 VIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVL 122
Query: 58 -----------PPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC 100
PVH + V K+ D E+ + S G A
Sbjct: 123 ADGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAA 182
Query: 101 -RRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 159
+ + P + ++ G G +GL ++ ++ GA RI+ +D++ + A +GA +
Sbjct: 183 VKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISP 242
Query: 160 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC--AGGKVCLVGMGHHEM 217
+ + I+E + ++ G + +F+ G +TM AL A+C G +VG+
Sbjct: 243 KDSTKPISEVLSEMT---GNNVGYTFEVIGHLETMIDAL-ASCHMNYGTSVVVGVPPSAK 298
Query: 218 TVPLTPAAVREVD-----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEE 272
+ P + V G + ++ P + + K D+ L+TH F K++ E
Sbjct: 299 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPF--KKISE 356
Query: 273 AFE 275
FE
Sbjct: 357 GFE 359
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 37/243 (15%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC------PEMKF- 54
V+GHE G + + GS+V+ + GD V++ ++C RC +CK R ++C P+
Sbjct: 63 VLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLG 122
Query: 55 ---FATPPVHGSLANQVVHP-AD-LCFKLPDNVSLEEGA-----MCEPLSVGVHACRRAN 104
F G A V+ P AD + K D E + + L G H C A
Sbjct: 123 AFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGCVSAG 182
Query: 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ 164
+ P ++V I GAGP+G AR GA +++ D + RL + + G + I +L+
Sbjct: 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETI-----DLR 237
Query: 165 DIAEEVEKIQKAMGT-----GID-VSFDCAGL---------NKTMSTALGATCAGGKVCL 209
+ A ++I + +G G+D V F+ GL N +++ AGG + +
Sbjct: 238 NSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGI 297
Query: 210 VGM 212
G+
Sbjct: 298 PGI 300
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPP 59
+V GHE G + +VGS+VK + GD+V + + +C C+ C N CP+M
Sbjct: 72 LVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASI 131
Query: 60 VH------GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNV 111
H G +N +V + PDN+ L+ GA +C ++V P ++
Sbjct: 132 YHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHI 191
Query: 112 LIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 171
I+G G +G V + A+AFG+ VI + K GAD+ + ++ + E
Sbjct: 192 GIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFL--------VSRDQE 243
Query: 172 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP 220
++Q A GT +D D + G + GK+ LVG + +P
Sbjct: 244 QMQAAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELP 291
>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase
pdb|1KOL|B Chain B, Crystal Structure Of Formaldehyde Dehydrogenase
Length = 398
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------- 53
+V+GHE G + + G +V+ L GD V++ ++C RC CK +C +
Sbjct: 63 LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGA 122
Query: 54 --FFATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEGA-----MCEPLSVGVHACRRAN 104
+ G A V+ P AD KLPD E + + L G H A
Sbjct: 123 YGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAG 182
Query: 105 IGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIG 152
+GP + V + GAGP+GL +AR GA +++ D++ RL+ AK G
Sbjct: 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG 230
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 110/266 (41%), Gaps = 17/266 (6%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+++GHE AG I +VG E+ + GD V + C +C+ G++N+C
Sbjct: 61 IILGHENAGTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTN 119
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRA----NIGPETNVLIMGA 116
G +V + KL +E + + + + A R+A + E V++ G
Sbjct: 120 GGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGI 179
Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYR--LSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 174
G + + T+ +A I IV + + A E+GAD + + ++D + K+
Sbjct: 180 GGLAVYTIQILKAL-MKNITIVGISRSKKHRDFALELGADYV----SEMKDAESLINKLT 234
Query: 175 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 234
+G I + D G +T G + LVGM +++ AV ++G
Sbjct: 235 DGLGASI--AIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGS 292
Query: 235 -FRYKNTWPLCLELLRSGKIDVKPLV 259
+ N + L SGKI KP +
Sbjct: 293 NYGSLNDLEDVVRLSESGKI--KPYI 316
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 38/203 (18%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+V+G E A V+E+VG V G+RV +C PP+
Sbjct: 62 IVVGFEAAAVVEEVGPGVTDFTVGERVC-----TC---------------------LPPL 95
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEE----GAMCEPLSVGVHACRRANIGPETNVLI-MG 115
G+ + + ++PA+ K+P ++ L++ G M + ++ + + P VLI
Sbjct: 96 -GAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAA 154
Query: 116 AGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 175
AG +G + + AR GA I V ++ + A+++G + + ST QD AE V +I
Sbjct: 155 AGGMGHIMVPWARHLGATVIGTVSTEE-KAETARKLGCHHTINYST--QDFAEVVREITG 211
Query: 176 AMGTGIDVSFDCAGLNKTMSTAL 198
G G+DV +D G T+ +L
Sbjct: 212 --GKGVDVVYDSIG-KDTLQKSL 231
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 120/287 (41%), Gaps = 24/287 (8%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
V + +GV+E VG V PGDRV IS + G R +
Sbjct: 85 FVPASDXSGVVEAVGKSVTRFRPGDRV-----ISTFAPGWLDGLRPGTGRTPAYETLGGA 139
Query: 61 H-GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGAG 117
H G L+ VV P P ++ E + C L+ + ++ V++ G G
Sbjct: 140 HPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTG 199
Query: 118 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 177
+ L + A+A GA +++ +L A +GAD+ + L++ + VE++
Sbjct: 200 GVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGIN---RLEE--DWVERVYALT 253
Query: 178 GT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVF 235
G G D + AG + +L A G++ ++G + E++ P+ P ++ V G+
Sbjct: 254 GDRGADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGIS 312
Query: 236 RYKNTWPLCLELLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARG 280
LE L ++ +KP++ R+ F+ EV EA RG
Sbjct: 313 VGHRR---ALEDLVGAVDRLGLKPVIDXRYKFT--EVPEALAHLDRG 354
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 13/217 (5%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPP 59
+V GHE AGV+ +G VK GD ++ SC C++C+ G + CP
Sbjct: 62 LVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTH 121
Query: 60 VHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMG-A 116
GS A +P L + A +C ++V A + AN+ V I G A
Sbjct: 122 -DGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV-YKALKSANLMAGHWVAISGAA 179
Query: 117 GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 176
G +G + + A+A G R++ +D + + + + IG + + T +DI V K
Sbjct: 180 GGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDF-TKEKDIVGAVLKATDG 237
Query: 177 MGTG-IDVSFDCAGLNKTMSTALGATCAGGKVCLVGM 212
G I+VS A + + A G LVGM
Sbjct: 238 GAHGVINVSVSEAAIEASTRYVR----ANGTTVLVGM 270
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 16/194 (8%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEM------- 52
M+ GHE AG+I++VG VK GD V + + SC C CK + C ++
Sbjct: 60 MIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCL 119
Query: 53 -KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPET 109
F P G +N +V + + N LE+ A +C ++ + + + T
Sbjct: 120 DSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITT-YSPLKFSKVTKGT 178
Query: 110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 169
V + G G +G + + A A GA + + ++++ A +G + T+ + EE
Sbjct: 179 KVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY---TDPKQCKEE 234
Query: 170 VEKIQKAMGTGIDV 183
++ I + T D+
Sbjct: 235 LDFIISTIPTHYDL 248
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 43/243 (17%)
Query: 4 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 63
G + AGVIE VG GDRV F + + G
Sbjct: 92 GSDVAGVIEAVGDNASAFKKGDRV---------------------------FTSSTISGG 124
Query: 64 LANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGA-GPIG 120
A + +KLP+ + ++GA P A A + +VL+ GA G +G
Sbjct: 125 YAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVG 184
Query: 121 LVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG-T 179
L ARA+G + ++ + V + GA + N +++ ++KI+K +G
Sbjct: 185 LAACQIARAYGLKILGTAGTEEGQKIVLQN-GAHEVF----NHREV-NYIDKIKKYVGEK 238
Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP--AAVREVDVVGVFRY 237
GID+ + N +S L GG+V +VG T+ + P +E ++GV +
Sbjct: 239 GIDIIIEMLA-NVNLSKDLSLLSHGGRVIVVG---SRGTIEINPRDTMAKESSIIGVTLF 294
Query: 238 KNT 240
+T
Sbjct: 295 SST 297
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 20/163 (12%)
Query: 111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 170
+L AG +GL+ + GA I + D+ +L +AKE GA+ ++ S +DI +V
Sbjct: 153 LLFAAAGGVGLILNQLLKMKGAHTIAVASTDE-KLKIAKEYGAEYLINASK--EDILRQV 209
Query: 171 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP------LTPA 224
K G G+D SFD G + T +L A G V G+ +P L+P
Sbjct: 210 LKFTN--GKGVDASFDSVGKD-TFEISLAALKRKG--VFVSFGNASGLIPPFSITRLSPK 264
Query: 225 AVREV--DVVGVFRYKNTWPLCLE----LLRSGKIDVKPLVTH 261
+ V + G W + L+ S K+++K T+
Sbjct: 265 NITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTY 307
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 39/164 (23%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
V+G + GV+E VG+EV GD V + +P +
Sbjct: 62 VLGFDAIGVVESVGNEVTMFNQGDIVY-------------------------YSGSPDQN 96
Query: 62 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS-----------VGVHACRRANIGPETN 110
GS A + L K P N+S E+ A+ PL+ G+ R N G +T
Sbjct: 97 GSNAEYQLINERLVAKAPKNISAEQ-AVSLPLTGITAYETLFDVFGISRNRNENEG-KTL 154
Query: 111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGAD 154
++I GAG +G + A+A+G R++ + + K++GAD
Sbjct: 155 LIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGAD 197
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 74/190 (38%), Gaps = 39/190 (20%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+V G EC+G++E +G VK GDRV + W
Sbjct: 62 LVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAW------------------------ 97
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGAGP 118
A V P + +K+PD++S E A ++ V AN+ +VL+ AG
Sbjct: 98 ----AEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGG 153
Query: 119 IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI-AEEVEKIQKAM 177
G+ +A P + + A + I T+L D A+ V+++++
Sbjct: 154 -GVGQAVAQLCSTVPNVTV-------FGTASTFKHEAIKDSVTHLFDRNADYVQEVKRIS 205
Query: 178 GTGIDVSFDC 187
G+D+ DC
Sbjct: 206 AEGVDIVLDC 215
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 111/279 (39%), Gaps = 37/279 (13%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYN---LCPEMKFFATP 58
VIG + AGV+ + G V GD V C + +N L PE + +
Sbjct: 120 VIGSDLAGVVLRTGPGVNAWQAGDEVVAH----CLSVELESSDGHNDTMLDPEQRIWGFE 175
Query: 59 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR------ANIGPETNVL 112
G LA + ++ PD++S EE A P V A R+ A + NVL
Sbjct: 176 TNFGGLAEIALVKSNQLMPKPDHLSWEEAAA--PGLVNSTAYRQLVSRNGAGMKQGDNVL 233
Query: 113 IMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST---------N 162
I GA G +G A A GA I +V + + + +GA+ I+ + N
Sbjct: 234 IWGASGGLGSYATQFALAGGANPICVVSSPQ-KAEICRAMGAEAIIDRNAEGYRFWKDEN 292
Query: 163 LQDIAEEVEKIQKAM-----GTGIDVSFDCAGLNKTMSTALGATCAGGKV--CLVGMGH- 214
QD +E ++ K + G ID+ F+ G +T ++ T GG + C G+
Sbjct: 293 TQD-PKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVFVTRKGGTITTCASTSGYM 350
Query: 215 HEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKI 253
HE +++ + Y+ W L+ G+I
Sbjct: 351 HEYDNRYLWMSLKRIIGSHFANYREAWE-ANRLIAKGRI 388
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMK-FFATP- 58
V GHE G + VG +V+ PGD V + + SC C+ C+ G N C M + +P
Sbjct: 79 VPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPT 138
Query: 59 ---PVH--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS----VGVHACRRANIGPET 109
P H G + Q+V ++ E+ A PL R GP
Sbjct: 139 PDEPGHTLGGYSQQIVVHERYVLRI--RHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGK 196
Query: 110 NVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEE 169
V ++G G +G + + A A GA +V + + AK +GAD +V S N ++A
Sbjct: 197 KVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVN-SRNADEMAAH 254
Query: 170 VEKIQKAMGT 179
++ + T
Sbjct: 255 LKSFDFILNT 264
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 36/212 (16%)
Query: 3 IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 62
+G E AGV+E VG EV GDRVA + T P+ G
Sbjct: 61 LGAEGAGVVEAVGDEVTRFKVGDRVA--------------------------YGTGPL-G 93
Query: 63 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLI-MGAGPI 119
+ + V P KL D+VS E+ A M + L+V + + P +L AG +
Sbjct: 94 AYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGV 153
Query: 120 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 179
G + A+A GA I V + + + AK +GA + S +D+A+ V ++ G
Sbjct: 154 GSLACQWAKALGAKLIGTVSSPE-KAAHAKALGAWETIDYSH--EDVAKRVLELTD--GK 208
Query: 180 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVG 211
V +D G T T+L + G V G
Sbjct: 209 KCPVVYDGVG-QDTWLTSLDSVAPRGLVVSFG 239
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 75/190 (39%), Gaps = 35/190 (18%)
Query: 3 IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 62
+G E AG++ KVGS VK + GDRV + + A VH
Sbjct: 61 LGTEAAGIVSKVGSGVKHIKAGDRV--------------------VYAQSALGAYSSVHN 100
Query: 63 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLI-MGAGPI 119
+ AD LP +S E+ A + L+V + I P+ L AG +
Sbjct: 101 II-------ADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGV 153
Query: 120 GLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 179
GL+ A+A GA I V S K GA ++ +D+ E +++I G
Sbjct: 154 GLIACQWAKALGAKLIGTVGTAQKAQSALKA-GAWQVINYRE--EDLVERLKEI--TGGK 208
Query: 180 GIDVSFDCAG 189
+ V +D G
Sbjct: 209 KVRVVYDSVG 218
>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CD9|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CDA|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
pdb|2CDA|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
Length = 366
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 81/207 (39%), Gaps = 31/207 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+V+GHE GV+E+ GD V C C +C GR + C E F +
Sbjct: 62 LVLGHEAIGVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFC-ETGEFGEAGI 117
Query: 61 H---GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS---------------VGVHACRR 102
H G + K+P ++ + G + +PL+ V V C
Sbjct: 118 HKMDGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDD 176
Query: 103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN 162
+ VL++G GPIG++ L R +G ++V E+ I + TN
Sbjct: 177 GTLNCR-KVLVVGTGPIGVLFTLLFRTYG------LEVWMANRREPTEVEQTVIEETKTN 229
Query: 163 LQDIAEEVEKIQKAMGTGIDVSFDCAG 189
+ + +K++ ++G DV D G
Sbjct: 230 YYNSSNGYDKLKDSVGK-FDVIIDATG 255
>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
Protein (np_718042.1) From Shewanella Oneidensis At 1.55
A Resolution
Length = 315
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 26/119 (21%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
V G + AGVI KVG++V + G RVA H R H
Sbjct: 61 VPGVDGAGVIVKVGAKVDSKXLGRRVAY----------HTSLKR---------------H 95
Query: 62 GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGAGPI 119
GS A V D LPDN+S E A PL A + + + VLI+G G +
Sbjct: 96 GSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAV 154
>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDC|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
Length = 366
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 81/207 (39%), Gaps = 31/207 (14%)
Query: 1 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 60
+V+GHE GV+E+ GD V C C +C GR + C E F +
Sbjct: 62 LVLGHEAIGVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFC-ETGEFGEAGI 117
Query: 61 H---GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS---------------VGVHACRR 102
H G + K+P ++ + G + +PL+ V V C
Sbjct: 118 HKMDGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDD 176
Query: 103 ANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN 162
+ VL++G GPIG++ L R +G ++V E+ I + TN
Sbjct: 177 GTLNCR-KVLVVGTGPIGVLFTLLFRTYG------LEVWMANRREPTEVEQTVIEETKTN 229
Query: 163 LQDIAEEVEKIQKAMGTGIDVSFDCAG 189
+ + +K++ ++G DV D G
Sbjct: 230 YYNSSNGYDKLKDSVGK-FDVIIDATG 255
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 121/306 (39%), Gaps = 34/306 (11%)
Query: 1 MVIGHECAGVIEKVGSEVKT-LVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATP 58
+V+GHE G + K+G + + L G RV + + SC CD CK C + +
Sbjct: 64 LVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQ 123
Query: 59 PV------HGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETN 110
P G AN V +P+N+ A +C L+V R GP
Sbjct: 124 PYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTV-YSPLVRNGCGPGKK 182
Query: 111 VLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 170
V I+G G IG + L ++A GA VI R K +GAD+ + EE
Sbjct: 183 VGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGADHYIAT-------LEEG 234
Query: 171 EKIQKAMGTGIDVSFDCAG--LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE 228
+ +K T D+ CA + + A GG++ + + + L P ++
Sbjct: 235 DWGEKYFDT-FDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKA 293
Query: 229 VDV----VGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAI 284
V + +G + N L L + KI V+ L G V EAFE +G +
Sbjct: 294 VSISYSALGSIKELNQL-LKLVSEKDIKIWVETLPVGEAG-----VHEAFERMEKGD--V 345
Query: 285 KVMFNL 290
+ F L
Sbjct: 346 RYRFTL 351
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 15/111 (13%)
Query: 30 EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM 89
E G +R DH + Y +C + F +N++ H DL P+N+ +
Sbjct: 109 ENGFLPFRLDHIRKMAYQICKSVNFLH--------SNKLTH-TDL---KPENILFVQSDY 156
Query: 90 CEPLSVGVHACRRANIGPETNVLIMGAGPIG---LVTMLAARAFGAPRIVI 137
E + + R I P+ V+ G+ T+++ R + AP +++
Sbjct: 157 TEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVIL 207
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 93/231 (40%), Gaps = 33/231 (14%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYN---LCPEMKFFATP 58
+IG + AGV+ + G V PGD V C + ++ L PE + +
Sbjct: 138 IIGSDLAGVVLRTGPGVNAWQPGDEVVAH----CLSVELESPDGHDDTMLDPEQRIWGFE 193
Query: 59 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR------ANIGPETNVL 112
G LA + + P +++ EE A P V A R+ A + NVL
Sbjct: 194 TNFGGLAEIALVKTNQLMPKPKHLTWEEAAA--PGLVNSTAYRQLVSRNGAAMKQGDNVL 251
Query: 113 IMGA-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST---------N 162
I GA G +G A A GA I +V + + + +GA+ I+ + +
Sbjct: 252 IWGASGGLGSYATQFALAGGANPICVVSSPQ-KAEICRSMGAEAIIDRNAEGYKFWKDEH 310
Query: 163 LQDIAEEVEKIQKAM-----GTGIDVSFDCAGLNKTMSTALGATCAGGKVC 208
QD +E ++ K + G ID+ F+ G +T ++ T GG +
Sbjct: 311 TQD-PKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVYVTRKGGTIT 359
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 16/88 (18%)
Query: 5 HECAGVIEK-VGSEVKTLVPGDRVALEPGISCW---RCDHCKGGRYNLCPEMKFFATPPV 60
E G++EK +G E ++ G+RV E I W R D G +
Sbjct: 24 EEALGLVEKELGKEYPLIINGERVTTEDKIQSWNPARKDQLVG------------SVSKA 71
Query: 61 HGSLANQVVHPADLCFKLPDNVSLEEGA 88
+ LA + + AD F+ NV+ EE A
Sbjct: 72 NQDLAEKAIQSADEAFQTWRNVNPEERA 99
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 15/111 (13%)
Query: 30 EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM 89
E G +R DH + Y +C + F + N++ H DL P+N+ +
Sbjct: 109 ENGFLPFRLDHIRKMAYQICKSVNFLHS--------NKLTH-TDL---KPENILFVQSDY 156
Query: 90 CEPLSVGVHACRRANIGPETNVLIMGAGPIG---LVTMLAARAFGAPRIVI 137
E + + R I P+ V+ G+ T++ R + AP +++
Sbjct: 157 TEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVXXRHYRAPEVIL 207
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 61
V+G +C+GV+ + G V+ PGD V + P + G L E + +
Sbjct: 112 VLGSDCSGVVVRTGIGVRRWKPGDHVIVHPA-HVDEQEPATHGDGMLGTEQRAWGFETNF 170
Query: 62 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-----ACRRANIGPETNVLIMGA 116
G LA V A P +++ EE A+ PL G + R A + VLI GA
Sbjct: 171 GGLAEYGVVRASQLLPKPAHLTWEEAAVS-PLCAGTAYRMLVSDRGAQMKQGDIVLIWGA 229
>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
With Bound Nadp
Length = 371
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 20/86 (23%)
Query: 3 IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 62
+G + AG + VGS+V + GDRV G + +CP P G
Sbjct: 66 LGTDYAGTVVAVGSDVTHIQVGDRV--------------YGAQNEMCPRT------PDQG 105
Query: 63 SLANQVVHPADLCFKLPDNVSLEEGA 88
+ + V + K+P +S E+ A
Sbjct: 106 AFSQYTVTRGRVWAKIPKGLSFEQAA 131
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 20/86 (23%)
Query: 3 IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 62
+G + AG + VGS+V + GDRV G + +CP P G
Sbjct: 66 LGTDYAGTVVAVGSDVTHIQVGDRV--------------YGAQNEMCPRT------PDQG 105
Query: 63 SLANQVVHPADLCFKLPDNVSLEEGA 88
+ + V + K+P +S E+ A
Sbjct: 106 AFSQYTVTRGRVWAKIPKGLSFEQAA 131
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 2 VIGHECAGVIEKVGSEVKTLVPGDRV 27
VIG++ AG++ VG +V PGD V
Sbjct: 84 VIGYDAAGIVSAVGPDVTLFRPGDEV 109
>pdb|1ZB7|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type G Light
Chain
Length = 455
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 158 KVSTNLQDIAEEVEKIQKAMGTGIDVS 184
K N QDIA + + A G+GID+S
Sbjct: 291 KALQNFQDIANRLNIVSSAQGSGIDIS 317
>pdb|3ZQ4|A Chain A, Unusual, Dual Endo- And Exo-Nuclease Activity In The
Degradosome Explained By Crystal Structure Analysis Of
Rnase J1
pdb|3ZQ4|C Chain C, Unusual, Dual Endo- And Exo-Nuclease Activity In The
Degradosome Explained By Crystal Structure Analysis Of
Rnase J1
pdb|3ZQ4|D Chain D, Unusual, Dual Endo- And Exo-Nuclease Activity In The
Degradosome Explained By Crystal Structure Analysis Of
Rnase J1
pdb|3ZQ4|E Chain E, Unusual, Dual Endo- And Exo-Nuclease Activity In The
Degradosome Explained By Crystal Structure Analysis Of
Rnase J1
Length = 555
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 30/144 (20%)
Query: 53 KFFATPPVHGSLANQVVH---------PADLCFKLPDNVSLEEGAMCEPLSVGVHACRRA 103
KFF P+HG Q +H P + CF + DN E L++ A
Sbjct: 384 KFFM--PIHGEYRMQKMHVKLATDCGIPEENCFIM-DN--------GEVLALKGDEASVA 432
Query: 104 NIGPETNVLIMGAG--PIGLVTMLAARAFGAPRIVIV----DVDDYRLSVAKEIGADNIV 157
P +V I G+G IG + + R +VIV D+DD+++S ++ + V
Sbjct: 433 GKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMDDFKISAGPDLISRGFV 492
Query: 158 --KVSTNLQDIAEEV--EKIQKAM 177
+ S +L + A+E+ +QK M
Sbjct: 493 YMRESGDLINDAQELISNHLQKVM 516
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 3 IGHECAGVIEKVGSEVKTLVPGDRV 27
+G E AGV+ + G V L PGDRV
Sbjct: 268 LGSEGAGVVVETGPGVTGLAPGDRV 292
>pdb|4GSL|A Chain A, Crystal Structure Of An Atg7-Atg3 Crosslinked Complex
pdb|4GSL|B Chain B, Crystal Structure Of An Atg7-Atg3 Crosslinked Complex
Length = 615
Score = 27.7 bits (60), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139
+I T VL++GAG +G A A+G +I VD
Sbjct: 322 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVD 357
>pdb|3VH2|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Atg7 (1-613)
Length = 616
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139
+I T VL++GAG +G A A+G +I VD
Sbjct: 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVD 358
>pdb|3RUI|A Chain A, Crystal Structure Of Atg7c-Atg8 Complex
Length = 340
Score = 27.3 bits (59), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139
+I T VL++GAG +G A A+G +I VD
Sbjct: 30 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVD 65
>pdb|3VH1|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Atg7 (1-595)
Length = 598
Score = 27.3 bits (59), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139
+I T VL++GAG +G A A+G +I VD
Sbjct: 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVD 358
>pdb|4GSK|A Chain A, Crystal Structure Of An Atg7-Atg10 Crosslinked Complex
pdb|4GSK|B Chain B, Crystal Structure Of An Atg7-Atg10 Crosslinked Complex
Length = 615
Score = 27.3 bits (59), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 15/87 (17%)
Query: 60 VHGSLANQVVHPADLC--FKLPD-----NVSLEEGAMCEPLSVGVHACRRANIGPETNVL 112
V G LA +VV + L K+ D N+ L + + L++ +I T VL
Sbjct: 279 VQGKLAPRVVDLSSLLDPLKIADQSVDLNLKLMKWRILPDLNL--------DIIKNTKVL 330
Query: 113 IMGAGPIGLVTMLAARAFGAPRIVIVD 139
++GAG +G A A+G +I VD
Sbjct: 331 LLGAGTLGCYVSRALIAWGVRKITFVD 357
>pdb|3VH3|A Chain A, Crystal Structure Of Atg7ctd-Atg8 Complex
pdb|3VH4|A Chain A, Crystal Structure Of Atg7ctd-Atg8-Mgatp Complex
Length = 340
Score = 27.3 bits (59), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139
+I T VL++GAG +G A A+G +I VD
Sbjct: 30 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVD 65
>pdb|3T7E|A Chain A, Atg8 Transfer From Atg7 To Atg3: A Distinctive E1-E2
Architecture And Mechanism In The Autophagy Pathway
Length = 344
Score = 27.3 bits (59), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 104 NIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139
+I T VL++GAG +G A A+G +I VD
Sbjct: 34 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVD 69
>pdb|1QO8|A Chain A, The Structure Of The Open Conformation Of A
Flavocytochrome C3 Fumarate Reductase
pdb|1QO8|D Chain D, The Structure Of The Open Conformation Of A
Flavocytochrome C3 Fumarate Reductase
Length = 566
Score = 27.3 bits (59), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 109 TNVLIMGAGPIGLVTMLAARAFGAPRIVIVD 139
T VL++GAG G LAA+ GA +++VD
Sbjct: 122 TQVLVVGAGSAGFNASLAAKKAGA-NVILVD 151
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,748,461
Number of Sequences: 62578
Number of extensions: 367009
Number of successful extensions: 1476
Number of sequences better than 100.0: 125
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1212
Number of HSP's gapped (non-prelim): 154
length of query: 290
length of database: 14,973,337
effective HSP length: 98
effective length of query: 192
effective length of database: 8,840,693
effective search space: 1697413056
effective search space used: 1697413056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)